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[]
[null,"Sample","Sample_Label","Chip_Barcode","Chip_Label"]
[null,"E1852-1_(PrimeView).CEL","NC","",""]
[null,"E1852-2_(PrimeView).CEL","NC","",""]
[null,"E1852-3_(PrimeView).CEL","NC","",""]
[null,"E1853-2_(PrimeView).CEL","KD","",""]
[null,"E1853-1_(PrimeView).CEL","KD","",""]
[null,"E1853-3_(PrimeView).CEL","KD","",""]

{"sheet":"Normalized_Data","index":1,"n_rows":49397,"n_cols":19,"rows_kept":4500,"cut":true,"hidden":false,"merged":[[0,1,0,3],[0,4,0,6],[0,7,0,8],[0,9,0,12],[0,13,0,18]],"bounds":{"rows_first":2000,"rows_last":500,"rows_between":2000,"halvings":0}}
["Probe","KD","KD","KD","NC","NC","NC","P-value","P-value","Fold change","Fold change","Fold change","Fold change","Annotation","Annotation","Annotation","Annotation","Annotation","Annotation"]
["probeSet","E1853-1_(PrimeView).CEL","E1853-2_(PrimeView).CEL","E1853-3_(PrimeView).CEL","E1852-1_(PrimeView).CEL","E1852-2_(PrimeView).CEL","E1852-3_(PrimeView).CEL","Corrected p-value","P-value","Fold change","Log Fold change","Absolute Fold change","Regulation","Gene Symbol","Entrez Gene","Gene Ontology Biological Process","Gene Ontology Cellular Component","Gene Ontology Molecular Function","Alignments"]
["11764191_at",0.004951,-0.10273361,-0.004951,0.12651253,-0.012167931,0.035948753,0.57404625,0.18826903,-1.0602043,-0.08434225,1.0602043,"down","","","","","","chr17:62342072-62343073 (+) // 99.8 // q23.3"]
["11727050_a_at",-7.505417E-4,-0.18571806,7.5006485E-4,-0.03256321,0.020720959,0.012556076,0.73092765,0.3871106,-1.0440162,-0.062144157,1.0440162,"down","PPP6C",5537.0,"0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0006470 // protein dephosphorylation // inferred from direct assay /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0006470 // protein dephosphorylation // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004722 // protein serine/threonine phosphatase activity // inferred from direct assay /// 0004722 // protein serine/threonine phosphatase activity // inferred from electronic annotation /// 0004722 // protein serine/threonine phosphatase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:127908852-127952218 (-) // 96.0 // q33.3"]
["11750344_a_at",0.03650856,-0.036509037,-0.24774742,-0.084548,0.051044464,0.15942383,0.6880346,0.32329756,-1.0901722,-0.124556,1.0901722,"down","ALOX15",246.0,"0006629 // lipid metabolic process // non-traceable author statement /// 0006691 // leukotriene metabolic process // inferred from electronic annotation /// 0006954 // inflammatory response // traceable author statement /// 0019370 // leukotriene biosynthetic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0005506 // iron ion binding // inferred from electronic annotation /// 0016165 // lipoxygenase activity // inferred from electronic annotation /// 0016165 // lipoxygenase activity // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016702 // oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050473 // arachidonate 15-lipoxygenase activity // inferred from electronic annotation","chr17:4534590-4545230 (-) // 97.77 // p13.2"]
["11759307_at",0.025740623,-0.01568222,0.0394516,0.01568222,-0.100914,-0.017392159,0.6371161,0.25762042,1.0357755,0.050711397,1.0357755,"up","RREB1",6239.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0007265 // Ras protein signal transduction // traceable author statement /// 0007275 // multicellular organismal development // traceable author statement /// 0045893 // positive regulation of transcription, DNA-dependent // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0016604 // nuclear body // traceable author statement /// 0016607 // nuclear speck // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:7108053-7252213 (+) // 95.0 // p24.3"]
["11761403_at",-0.0965786,0.08235383,0.02686882,-0.026868582,0.08757901,-0.20607519,0.8599457,0.62790173,1.0371823,0.052669533,1.0371823,"up","ISCU",23479.0,"0009399 // nitrogen fixation // traceable author statement /// 0016226 // iron-sulfur cluster assembly // traceable author statement /// 0016226 // iron-sulfur cluster assembly // inferred from electronic annotation","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay","0005506 // iron ion binding // traceable author statement /// 0005506 // iron ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0032947 // protein complex scaffold // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation","chr12:108956373-108961684 (+) // 80.72 // q23.3"]
["11757172_at",-0.026549816,-5.9223175E-4,5.9223175E-4,-0.17574215,0.15292645,0.016129494,0.98494846,0.94817865,-1.0046,-0.006621249,1.0046,"down","SNORA47",677828.0,"","","","chr5:76376258-76376396 (-) // 100.0 // q13.3"]
["11763268_at",-0.07207775,-0.045230865,-0.16376972,0.045230865,0.3019619,0.26955748,0.28946513,0.027584013,-1.2305269,-0.29927623,1.2305269,"down","FAM120B",84498.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","","chr6:170599790-170716404 (+) // 88.48 // q27"]
["11727695_a_at",-0.12711763,-0.11053538,0.047463655,-0.047463655,0.050352097,0.04766488,0.6546215,0.27987394,-1.0571995,-0.08024762,1.0571995,"down","KLRC4-KLRK1 /// KLRK1","100528032 /// 22914","0002223 // stimulatory C-type lectin receptor signaling pathway // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0030101 // natural killer cell activation // inferred from electronic annotation /// 0030101 // natural killer cell activation // traceable author statement /// 0031295 // T cell costimulation // traceable author statement /// 0032729 // positive regulation of interferon-gamma production // inferred from electronic annotation /// 0045429 // positive regulation of nitric oxide biosynthetic process // inferred from electronic annotation /// 0045954 // positive regulation of natural killer cell mediated cytotoxicity // inferred from electronic annotation /// 0050776 // regulation of immune response // traceable author statement /// 0050830 // defense response to Gram-positive bacterium // inferred from electronic annotation /// 0071222 // cellular response to lipopolysaccharide // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0030246 // carbohydrate binding // inferred from electronic annotation /// 0032394 // MHC class Ib receptor activity // inferred from electronic annotation /// 0042288 // MHC class I protein binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation","chr12:10524951-10542640 (-) // 54.21 // p13.2"]
["11730840_a_at",0.026442528,0.009474754,0.033885956,-0.03077221,-0.014271259,-0.0094742775,0.21844904,0.012856187,1.0291407,0.04144025,1.0291407,"up","ZMYND8",23613.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0016310 // phosphorylation // inferred from electronic annotation","0005634 // nucleus // inferred from sequence or structural similarity","0001106 // RNA polymerase II transcription corepressor activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070491 // repressing transcription factor binding // inferred from sequence or structural similarity","chr20:45837858-45985474 (-) // 98.92 // q13.12"]
["11755175_a_at",-0.023079872,0.023079872,-0.033441544,-0.09376621,0.05625534,0.15315485,0.817874,0.53812927,-1.0350462,-0.04969519,1.0350462,"down","HSPA12A",259217.0,"0006950 // response to stress // inferred from electronic annotation","","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation","chr10:118430703-118609716 (-) // 94.89 // q25.3"]
["11731820_at",0.021948338,0.021948338,-0.0071806908,-0.08972764,0.0071806908,-0.059093,0.4922723,0.12037931,1.0420698,0.059451904,1.0420698,"up","ADAM11",4185.0,"0006508 // proteolysis // inferred from electronic annotation /// 0007229 // integrin-mediated signaling pathway // traceable author statement /// 0007229 // integrin-mediated signaling pathway // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from sequence or structural similarity","0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0005178 // integrin binding // traceable author statement /// 0008237 // metallopeptidase activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation","chr17:42836398-42859214 (+) // 96.66 // q21.31"]
["11731123_a_at",-0.013416529,0.0,0.07771158,0.080094814,0.0,-0.11573315,0.8599322,0.62783146,1.0233581,0.03331108,1.0233581,"up","TMEM200A",114801.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr6:130758261-130764212 (+) // 93.26 // q23.1"]
["11761012_x_at",0.17494583,0.037359715,-0.1419096,-0.07685375,-0.037359715,0.04186821,0.87148196,0.65318364,1.0335301,0.04758043,1.0335301,"up","POM121L8P",29797.0,"","","","chr20:23969351-23971719 (+) // 91.03 // p11.21 /// chr22:21636713-21639084 (+) // 93.78 // q11.21 /// chr22:18833988-18836359 (+) // 93.41 // q11.21 /// chr22:24647516-24649886 (+) // 92.32 // q11.23 /// chr22:21043862-21046233 (+) // 91.36 // q11.21 /// chr22:21480010-21482381 (-) // 93.66 // q11.21 /// chr22:22984642-22987012 (-) // 92.36 // q11.22 /// chr22:25052816-25055186 (-) // 92.32 // q11.23"]
["11763593_a_at",-0.122914314,0.052170753,0.023754597,-0.023754597,0.13610125,-0.031896114,0.8521857,0.61068696,-1.0298826,-0.042479817,1.0298826,"down","RGNEF",64283.0,"0021955 // central nervous system neuron axonogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0060052 // neurofilament cytoskeleton organization // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr5:73181727-73237817 (+) // 99.22 // q13.2"]
["11730317_at",-0.04089427,0.06593394,-0.248523,-0.008271217,0.026552439,0.008271217,0.7525184,0.4201885,-1.0594718,-0.08334525,1.0594718,"down","RGS7BP",401190.0,"0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0009968 // negative regulation of signal transduction // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","","chr5:63801773-63908145 (+) // 89.65 // q12.3"]
["11743747_a_at",0.012178421,0.030069828,-0.012178421,0.03089428,-0.17351913,-0.020186424,0.71570444,0.36264113,1.045573,0.06429379,1.045573,"up","PHKA1",5255.0,"0005975 // carbohydrate metabolic process // traceable author statement /// 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0005976 // polysaccharide metabolic process // inferred from electronic annotation /// 0005977 // glycogen metabolic process // traceable author statement /// 0005977 // glycogen metabolic process // inferred from electronic annotation /// 0005980 // glycogen catabolic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006091 // generation of precursor metabolites and energy // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046777 // protein autophosphorylation // inferred from electronic annotation","0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005964 // phosphorylase kinase complex // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004553 // hydrolase activity, hydrolyzing O-glycosyl compounds // inferred from electronic annotation /// 0004689 // phosphorylase kinase activity // inferred from electronic annotation /// 0004689 // phosphorylase kinase activity // traceable author statement /// 0005516 // calmodulin binding // inferred from electronic annotation","chrX:71798663-71934043 (-) // 98.84 // q13.1"]
["11716432_a_at",0.055832863,0.017308235,-0.017308235,-0.061710835,-0.028656006,0.037674904,0.7217237,0.3724997,1.0253916,0.036174953,1.0253916,"up","MNAT1",4331.0,"0000079 // regulation of cyclin-dependent protein kinase activity // traceable author statement /// 0000080 // G1 phase of mitotic cell cycle // traceable author statement /// 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000082 // G1/S transition of mitotic cell cycle // inferred from electronic annotation /// 0000084 // S phase of mitotic cell cycle // traceable author statement /// 0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0000718 // nucleotide-excision repair, DNA damage removal // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006283 // transcription-coupled nucleotide-excision repair // traceable author statement /// 0006289 // nucleotide-excision repair // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006360 // transcription from RNA polymerase I promoter // traceable author statement /// 0006361 // transcription initiation from RNA polymerase I promoter // traceable author statement /// 0006362 // transcription elongation from RNA polymerase I promoter // traceable author statement /// 0006363 // termination of RNA polymerase I transcription // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // inferred from direct assay /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006368 // transcription elongation from RNA polymerase II promoter // traceable author statement /// 0006370 // 7-methylguanosine mRNA capping // traceable author statement /// 0006461 // protein complex assembly // traceable author statement /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007512 // adult heart development // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0021591 // ventricular system development // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0044236 // multicellular organismal metabolic process // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from electronic annotation /// 0050434 // positive regulation of viral transcription // traceable author statement /// 0050790 // regulation of catalytic activity // inferred from electronic annotation /// 0051592 // response to calcium ion // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005675 // holo TFIIH complex // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0004672 // protein kinase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008094 // DNA-dependent ATPase activity // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008270 // zinc ion binding // traceable author statement /// 0008353 // RNA polymerase II carboxy-terminal domain kinase activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from physical interaction","chr14:61201458-61435480 (+) // 94.24 // q23.1"]
["11734196_a_at",0.057724476,0.069180965,0.032455444,-0.11678076,-0.05167055,-0.032454967,0.21486291,0.012338489,1.0868019,0.12008897,1.0868019,"up","SAMD4B",55095.0,"","","","chr19:39842454-39875535 (+) // 90.83 // q13.2"]
["11736790_x_at",-0.08123398,0.0015444756,0.052009583,-0.0066657066,0.101890564,-0.0015444756,0.7907034,0.4841708,-1.028437,-0.040453445,1.028437,"down","FBXO4",26272.0,"0000209 // protein polyubiquitination // inferred from direct assay /// 0000723 // telomere maintenance // inferred from mutant phenotype /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0031146 // SCF-dependent proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0031398 // positive regulation of protein ubiquitination // inferred from direct assay","0000151 // ubiquitin ligase complex // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0019005 // SCF ubiquitin ligase complex // inferred from direct assay","0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction","chr5:41925355-41935423 (+) // 83.91 // p13.1"]
["11745745_a_at",0.04516983,-0.0057783127,0.105835915,-0.070783615,-0.0865984,0.0057783127,0.4297204,0.08315222,1.070989,0.09894368,1.070989,"up","SLC39A1",27173.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // traceable author statement /// 0006829 // zinc ion transport // inferred from electronic annotation /// 0030001 // metal ion transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0071577 // zinc ion transmembrane transport // inferred from mutant phenotype /// 0071577 // zinc ion transmembrane transport // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0005102 // receptor binding // inferred from electronic annotation /// 0005385 // zinc ion transmembrane transporter activity // inferred from electronic annotation /// 0022890 // inorganic cation transmembrane transporter activity // traceable author statement /// 0046873 // metal ion transmembrane transporter activity // inferred from electronic annotation","chr1:153931651-153940097 (-) // 92.53 // q21.3"]
["11716949_s_at",0.008844376,-0.037861824,0.015274048,7.405281E-4,-0.035367966,-7.4100494E-4,0.91015744,0.74264574,1.0050089,0.007208329,1.0050089,"up","TM9SF3",56889.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005488 // binding // inferred from direct assay","chr10:98277867-98346797 (-) // 96.48 // q24.1"]
["11715860_a_at",-0.007308483,-0.08980417,0.00730896,0.11681414,-0.015954494,0.0467906,0.5653321,0.18034089,-1.0563964,-0.07915124,1.0563964,"down","RIC8A",60626.0,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0008542 // visual learning // inferred from electronic annotation /// 0009416 // response to light stimulus // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation","0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0001965 // G-protein alpha-subunit binding // inferred from electronic annotation /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005096 // GTPase activator activity // inferred from electronic annotation","chr11:207118-215113 (+) // 82.86 // p15.5"]
["11753470_a_at",-0.11768055,-0.07619333,0.03487301,-0.027459145,0.027459145,0.033384323,0.6426378,0.26474574,-1.0454532,-0.064128466,1.0454532,"down","TIA1",7072.0,"0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // traceable author statement /// 0017148 // negative regulation of translation // inferred from electronic annotation /// 0042036 // negative regulation of cytokine biosynthetic process // inferred from electronic annotation /// 0048024 // regulation of nuclear mRNA splicing, via spliceosome // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008143 // poly(A) RNA binding // traceable author statement /// 0017091 // AU-rich element binding // inferred from electronic annotation","chr2:70443805-70475586 (-) // 95.68 // p13.3"]
["11737412_at",0.033485413,-0.17680454,-0.0011444092,0.0011444092,-0.02661848,0.1632154,0.7040139,0.34524536,-1.0673759,-0.09406834,1.0673759,"down","SCML4",256380.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation","chr6:108023360-108145521 (-) // 84.48 // q21"]
["11733237_a_at",0.14622402,0.03238225,-0.034832716,0.09406996,-0.033731222,-0.03238225,0.8471217,0.59919566,1.0271207,0.03860574,1.0271207,"up","RPGRIP1L",23322.0,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0001822 // kidney development // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0007368 // determination of left/right symmetry // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0008589 // regulation of smoothened signaling pathway // inferred from electronic annotation /// 0021532 // neural tube patterning // inferred from electronic annotation /// 0021537 // telencephalon development // inferred from electronic annotation /// 0021549 // cerebellum development // inferred from electronic annotation /// 0021670 // lateral ventricle development // inferred from electronic annotation /// 0021772 // olfactory bulb development // inferred from electronic annotation /// 0022038 // corpus callosum development // inferred from electronic annotation /// 0035108 // limb morphogenesis // inferred from electronic annotation /// 0035115 // embryonic forelimb morphogenesis // inferred from electronic annotation /// 0035116 // embryonic hindlimb morphogenesis // inferred from electronic annotation /// 0042384 // cilium assembly // inferred from electronic annotation /// 0043010 // camera-type eye development // inferred from electronic annotation /// 0043584 // nose development // inferred from electronic annotation /// 0045744 // negative regulation of G-protein coupled receptor protein signaling pathway // inferred from direct assay /// 0060039 // pericardium development // inferred from electronic annotation /// 0060322 // head development // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from direct assay /// 0005923 // tight junction // inferred from electronic annotation /// 0005929 // cilium // inferred from direct assay /// 0005929 // cilium // inferred from electronic annotation /// 0005932 // microtubule basal body // inferred from direct assay /// 0005932 // microtubule basal body // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0035085 // cilium axoneme // inferred from direct assay /// 0035085 // cilium axoneme // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0031870 // thromboxane A2 receptor binding // inferred from physical interaction","chr16:53633817-53737742 (-) // 96.81 // q12.2"]
["11732837_a_at",0.08501673,-0.1463213,-0.013252735,-0.083823204,0.013252735,0.17300272,0.8419926,0.58869874,-1.0417409,-0.058996487,1.0417409,"down","IL37",27178.0,"0001960 // negative regulation of cytokine-mediated signaling pathway // inferred from electronic annotation /// 0006955 // immune response // non-traceable author statement","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation","0005125 // cytokine activity // inferred from electronic annotation /// 0005149 // interleukin-1 receptor binding // non-traceable author statement /// 0005149 // interleukin-1 receptor binding // traceable author statement /// 0005152 // interleukin-1 receptor antagonist activity // inferred from electronic annotation","chr2:113670547-113676459 (+) // 95.9 // q13"]
["11747580_a_at",0.0064053535,0.038564205,-0.10126114,-0.0064053535,-0.046999454,0.030740738,0.9426029,0.82636076,-1.0077999,-0.011209167,1.0077999,"down","PGS1",9489.0,"0006655 // phosphatidylglycerol biosynthetic process // inferred from sequence or structural similarity /// 0006655 // phosphatidylglycerol biosynthetic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008654 // phospholipid biosynthetic process // inferred from electronic annotation /// 0032049 // cardiolipin biosynthetic process // inferred from sequence or structural similarity /// 0046339 // diacylglycerol metabolic process // inferred from sequence or structural similarity","0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from sequence or structural similarity /// 0005524 // ATP binding // inferred from electronic annotation /// 0008444 // CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity // inferred from sequence or structural similarity /// 0008444 // CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016780 // phosphotransferase activity, for other substituted phosphate groups // inferred from electronic annotation","chr17:76374731-76420637 (+) // 98.17 // q25.3"]
["11744584_a_at",-0.0023565292,0.0023565292,0.0325346,0.0062389374,-0.019685745,-0.023017883,0.56920063,0.18344204,1.01607,0.022999808,1.01607,"up","HYI",81888.0,"","","0008903 // hydroxypyruvate isomerase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation","chr1:43916277-43919346 (-) // 92.28 // p34.2"]
["11720005_at",-0.030516863,0.11483693,-0.1220274,0.095784664,-0.025897503,0.025897503,0.8458778,0.5963871,-1.0313238,-0.044497345,1.0313238,"down","NPTX2",4885.0,"0007268 // synaptic transmission // non-traceable author statement","0005576 // extracellular region // inferred from electronic annotation","0030246 // carbohydrate binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:98246596-98259181 (+) // 94.95 // q22.1"]
["11731753_a_at",-0.066197395,0.064772606,0.19351697,0.11427975,-0.064772606,-0.09450054,0.78322786,0.47093567,1.0563065,0.07902849,1.0563065,"up","ZNF577",84765.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:52374552-52391229 (-) // 79.47 // q13.41"]
["11758622_s_at",0.013806343,0.0016069412,-0.052150726,-0.0016069412,-0.01893425,0.021270752,0.85702544,0.6213543,-1.0086943,-0.012488998,1.0086943,"down","MXRA7",439921.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr17:74675651-74676010 (-) // 99.72 // q25.1 /// chr2:162196027-162196386 (-) // 99.16 // q24.2"]
["11762600_a_at",0.1305151,-0.15479946,-0.043074608,0.043074846,-0.14425373,0.046854258,0.99051166,0.9687558,-1.0030161,-0.004344784,1.0030161,"down","SEC31B",25956.0,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0012507 // ER to Golgi transport vesicle membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0003954 // NADH dehydrogenase activity // inferred from electronic annotation /// 0008137 // NADH dehydrogenase (ubiquinone) activity // inferred from electronic annotation","chr10:102265384-102289628 (-) // 99.9 // q24.31"]
["11736940_at",-8.9740753E-4,8.9740753E-4,-0.067284584,-0.19425917,0.17172813,0.06564903,0.91609967,0.75689733,-1.0258366,-0.036800932,1.0258366,"down","CHRNB4",1143.0,"0001508 // regulation of action potential // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006811 // ion transport // inferred from electronic annotation /// 0006939 // smooth muscle contraction // inferred from electronic annotation /// 0006940 // regulation of smooth muscle contraction // inferred from electronic annotation /// 0007165 // signal transduction // inferred from direct assay /// 0007268 // synaptic transmission // traceable author statement /// 0007271 // synaptic transmission, cholinergic // traceable author statement /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0035094 // response to nicotine // inferred from electronic annotation /// 0035095 // behavioral response to nicotine // inferred from electronic annotation /// 0042391 // regulation of membrane potential // inferred from electronic annotation /// 0046928 // regulation of neurotransmitter secretion // non-traceable author statement /// 0060084 // synaptic transmission involved in micturition // inferred from mutant phenotype /// 0060084 // synaptic transmission involved in micturition // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred by curator /// 0005892 // acetylcholine-gated channel complex // inferred from direct assay /// 0005892 // acetylcholine-gated channel complex // traceable author statement /// 0005892 // acetylcholine-gated channel complex // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004889 // acetylcholine-activated cation-selective channel activity // traceable author statement /// 0004889 // acetylcholine-activated cation-selective channel activity // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005230 // extracellular ligand-gated ion channel activity // inferred from electronic annotation /// 0015276 // ligand-gated ion channel activity // traceable author statement /// 0015464 // acetylcholine receptor activity // inferred from direct assay /// 0042166 // acetylcholine binding // inferred from electronic annotation","chr15:78916514-78933587 (-) // 73.27 // q25.1"]
["11741412_at",-0.107340574,0.07544422,-0.035742044,-0.007996559,0.08118677,0.007996559,0.7720808,0.45373216,-1.034984,-0.049608454,1.034984,"down","LHX9",56956.0,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0008045 // motor axon guidance // inferred from sequence or structural similarity /// 0008283 // cell proliferation // inferred from electronic annotation /// 0008584 // male gonad development // inferred from electronic annotation /// 0008585 // female gonad development // inferred from electronic annotation /// 0035262 // gonad morphogenesis // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from sequence or structural similarity","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003714 // transcription corepressor activity // inferred from sequence or structural similarity /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:197886516-197899273 (+) // 97.89 // q31.3"]
["11753606_x_at",-0.0018234253,-0.033283234,0.006942749,0.0018234253,-0.022403717,0.019112587,0.86171633,0.6312304,-1.0061872,-0.0088987425,1.0061872,"down","CDC42",998.0,"0001934 // positive regulation of protein phosphorylation // inferred from electronic annotation /// 0003334 // keratinocyte development // inferred from electronic annotation /// 0006184 // GTP catabolic process // traceable author statement /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0007030 // Golgi organization // inferred from sequence or structural similarity /// 0007088 // regulation of mitosis // inferred from electronic annotation /// 0007097 // nuclear migration // inferred from electronic annotation /// 0007163 // establishment or maintenance of cell polarity // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0010629 // negative regulation of gene expression // inferred from electronic annotation /// 0016337 // cell-cell adhesion // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from direct assay /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030225 // macrophage differentiation // traceable author statement /// 0031069 // hair follicle morphogenesis // inferred from electronic annotation /// 0031274 // positive regulation of pseudopodium assembly // inferred from direct assay /// 0031295 // T cell costimulation // traceable author statement /// 0031333 // negative regulation of protein complex assembly // inferred from physical interaction /// 0031424 // keratinization // inferred from electronic annotation /// 0031647 // regulation of protein stability // inferred from electronic annotation /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from electronic annotation /// 0034332 // adherens junction organization // inferred from electronic annotation /// 0034613 // cellular protein localization // inferred from electronic annotation /// 0035088 // establishment or maintenance of apical/basal cell polarity // inferred from electronic annotation /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0042059 // negative regulation of epidermal growth factor receptor signaling pathway // traceable author statement /// 0042176 // regulation of protein catabolic process // inferred from electronic annotation /// 0042692 // muscle cell differentiation // traceable author statement /// 0043410 // positive regulation of MAPK cascade // inferred from electronic annotation /// 0043497 // regulation of protein heterodimerization activity // inferred from electronic annotation /// 0043552 // positive regulation of phosphatidylinositol 3-kinase activity // inferred from electronic annotation /// 0045740 // positive regulation of DNA replication // inferred from electronic annotation /// 0045859 // regulation of protein kinase activity // inferred from electronic annotation /// 0046330 // positive regulation of JNK cascade // inferred from electronic annotation /// 0046847 // filopodium assembly // inferred from electronic annotation /// 0048664 // neuron fate determination // inferred from electronic annotation /// 0048730 // epidermis morphogenesis // inferred from electronic annotation /// 0051017 // actin filament bundle assembly // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement /// 0051149 // positive regulation of muscle cell differentiation // traceable author statement /// 0051246 // regulation of protein metabolic process // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 0051489 // regulation of filopodium assembly // inferred from direct assay /// 0051647 // nucleus localization // inferred from electronic annotation /// 0051683 // establishment of Golgi localization // inferred from sequence or structural similarity /// 0051988 // regulation of attachment of spindle microtubules to kinetochore // inferred from mutant phenotype /// 0060070 // canonical Wnt receptor signaling pathway // inferred from electronic annotation /// 0060684 // epithelial-mesenchymal cell signaling // inferred from electronic annotation /// 0060789 // hair follicle placode formation // inferred from electronic annotation /// 0071338 // positive regulation of hair follicle cell proliferation // inferred from electronic annotation /// 0071777 // positive regulation of cell cycle cytokinesis // inferred from mutant phenotype /// 0072384 // organelle transport along microtubule // inferred from sequence or structural similarity /// 0090136 // epithelial cell-cell adhesion // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0000139 // Golgi membrane // inferred from sequence or structural similarity /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030141 // secretory granule // inferred from electronic annotation /// 0030175 // filopodium // inferred from direct assay /// 0030496 // midbody // inferred from direct assay /// 0030496 // midbody // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043005 // neuron projection // inferred from direct assay /// 0043025 // neuronal cell body // inferred from direct assay /// 0045177 // apical part of cell // inferred from electronic annotation /// 0051233 // spindle midzone // inferred from direct assay /// 0071944 // cell periphery // inferred from electronic annotation /// 0072686 // mitotic spindle // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from direct assay /// 0019901 // protein kinase binding // inferred from physical interaction /// 0030742 // GTP-dependent protein binding // inferred from electronic annotation /// 0031435 // mitogen-activated protein kinase kinase kinase binding // inferred from electronic annotation /// 0031996 // thioesterase binding // inferred from physical interaction","chr1:22404971-22418010 (+) // 100.0 // p36.12 /// chr4:22728997-22729573 (-) // 98.96 // p15.2"]
["11761646_at",0.053436756,-0.124890566,0.069386005,-0.03093338,-0.018500805,0.018500805,0.96339923,0.88780016,1.0066917,0.009621916,1.0066917,"up","SRGAP3",9901.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0005096 // GTPase activator activity // inferred from electronic annotation","chr3:9048662-9166601 (-) // 80.34 // p25.3"]
["11718707_a_at",0.17340946,0.06683445,-0.102843285,-0.14121151,0.10059357,-0.06683445,0.7930979,0.49046814,1.0582039,0.08161769,1.0582039,"up","IGF1R",3480.0,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0006916 // anti-apoptosis // traceable author statement /// 0006955 // immune response // inferred from mutant phenotype /// 0007165 // signal transduction // traceable author statement /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0007409 // axonogenesis // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0014065 // phosphatidylinositol 3-kinase cascade // inferred by curator /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030010 // establishment of cell polarity // inferred from electronic annotation /// 0030238 // male sex determination // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from mutant phenotype /// 0030879 // mammary gland development // inferred from electronic annotation /// 0031017 // exocrine pancreas development // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from electronic annotation /// 0032467 // positive regulation of cytokinesis // inferred from electronic annotation /// 0033197 // response to vitamin E // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043409 // negative regulation of MAPK cascade // inferred from electronic annotation /// 0043410 // positive regulation of MAPK cascade // inferred from electronic annotation /// 0045740 // positive regulation of DNA replication // inferred from mutant phenotype /// 0045768 // positive regulation of anti-apoptosis // inferred from electronic annotation /// 0046328 // regulation of JNK cascade // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from electronic annotation /// 0048009 // insulin-like growth factor receptor signaling pathway // inferred from direct assay /// 0048009 // insulin-like growth factor receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // inferred from direct assay /// 0051054 // positive regulation of DNA metabolic process // inferred from electronic annotation /// 0051262 // protein tetramerization // inferred from direct assay /// 0051291 // protein heterooligomerization // inferred from electronic annotation /// 0051389 // inactivation of MAPKK activity // inferred from direct assay /// 0051897 // positive regulation of protein kinase B signaling cascade // inferred from electronic annotation /// 0051898 // negative regulation of protein kinase B signaling cascade // inferred from electronic annotation /// 0060740 // prostate gland epithelium morphogenesis // inferred from electronic annotation /// 0090031 // positive regulation of steroid hormone biosynthetic process // inferred from electronic annotation","0005792 // microsome // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred by curator /// 0005901 // caveola // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005010 // insulin-like growth factor-activated receptor activity // inferred from direct assay /// 0005010 // insulin-like growth factor-activated receptor activity // traceable author statement /// 0005158 // insulin receptor binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005520 // insulin-like growth factor binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0031994 // insulin-like growth factor I binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0043548 // phosphatidylinositol 3-kinase binding // inferred from physical interaction /// 0043548 // phosphatidylinositol 3-kinase binding // inferred from electronic annotation /// 0043559 // insulin binding // inferred from physical interaction /// 0043560 // insulin receptor substrate binding // inferred from physical interaction /// 0043560 // insulin receptor substrate binding // inferred from electronic annotation","chr15:99192272-99507759 (+) // 97.28 // q26.3"]
["11722086_x_at",-0.2109673,0.006186962,0.096607685,-0.0061872005,0.16718078,-0.07425308,0.8504766,0.60580295,-1.0460639,-0.064970985,1.0460639,"down","SEPT1",1731.0,"0007049 // cell cycle // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0031105 // septin complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation","chr16:30389455-30394171 (-) // 96.24 // p11.2"]
["11742820_s_at",0.25551176,-0.07196593,0.13439322,-0.09006882,0.07196593,-0.09006882,0.6432113,0.26544625,1.103462,0.14203691,1.103462,"up","OGN",4969.0,"0048662 // negative regulation of smooth muscle cell proliferation // inferred from sequence or structural similarity","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0031012 // extracellular matrix // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // inferred from electronic annotation","chr9:95146099-95166937 (-) // 99.63 // q22.31"]
["11740952_at",-0.37711096,0.09280443,-0.41077518,0.070898056,-0.070898056,0.08027649,0.5891152,0.20250563,-1.1961951,-0.25845274,1.1961951,"down","OTUD7A",161725.0,"0006508 // proteolysis // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr15:31775328-31947542 (-) // 88.66 // q13.3"]
["11746041_a_at",0.011466026,0.013789177,0.16827488,-0.049402237,-0.011466026,-0.12023258,0.47458455,0.109601855,1.0904148,0.124877,1.0904148,"up","TRA2B",6434.0,"0000375 // RNA splicing, via transesterification reactions // traceable author statement /// 0000381 // regulation of alternative nuclear mRNA splicing, via spliceosome // inferred from direct assay /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred from direct assay /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0048026 // positive regulation of nuclear mRNA splicing, via spliceosome // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003729 // mRNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction","chr3:185634536-185655818 (-) // 94.9 // q27.2"]
["11762973_at",-0.0024039745,0.002403736,-0.10041046,0.037309885,-0.17924786,0.14276028,0.91520035,0.7539865,-1.0236654,-0.033744264,1.0236654,"down","","","","0005576 // extracellular region // inferred from electronic annotation","","chr2:31393687-31394575 (-) // 65.65 // p23.1"]
["11744564_a_at",-0.020430565,-0.0055265427,-0.0108270645,0.062503815,0.0055265427,0.0108270645,0.47241238,0.10814665,-1.027079,-0.038547132,1.027079,"down","PPWD1",23398.0,"0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0000413 // protein peptidyl-prolyl isomerization // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006457 // protein folding // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay","0003755 // peptidyl-prolyl cis-trans isomerase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation","chr5:64859125-64883376 (+) // 99.43 // q12.3"]
["11759054_at",-0.08719516,-0.0424273,0.20355654,-0.17093349,0.0424273,0.053875446,0.88803524,0.6920292,1.0349216,0.049521543,1.0349216,"up","DEFB126",81623.0,"0006952 // defense response // inferred from electronic annotation /// 0042742 // defense response to bacterium // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0030112 // glycocalyx // inferred from electronic annotation","","chr20:123009-126392 (+) // 91.23 // p13"]
["11720104_a_at",0.12294102,0.04035616,0.0022215843,-0.09428835,-0.0022215843,-0.07009554,0.4064566,0.0698452,1.079758,0.110708065,1.079758,"up","PAK1",5058.0,"0000165 // MAPK cascade // inferred from direct assay /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016358 // dendrite development // inferred from electronic annotation /// 0031295 // T cell costimulation // traceable author statement /// 0031532 // actin cytoskeleton reorganization // inferred from direct assay /// 0031532 // actin cytoskeleton reorganization // inferred from mutant phenotype /// 0031532 // actin cytoskeleton reorganization // non-traceable author statement /// 0032869 // cellular response to insulin stimulus // inferred from electronic annotation /// 0032956 // regulation of actin cytoskeleton organization // inferred from electronic annotation /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from direct assay /// 0033148 // positive regulation of intracellular estrogen receptor signaling pathway // inferred from direct assay /// 0033554 // cellular response to stress // inferred from electronic annotation /// 0042060 // wound healing // inferred from mutant phenotype /// 0043507 // positive regulation of JUN kinase activity // inferred from mutant phenotype /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from electronic annotation /// 0048754 // branching morphogenesis of a tube // inferred from mutant phenotype /// 0048812 // neuron projection morphogenesis // inferred from sequence or structural similarity /// 0048812 // neuron projection morphogenesis // inferred from electronic annotation /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0051496 // positive regulation of stress fiber assembly // inferred from mutant phenotype /// 0060244 // negative regulation of cell proliferation involved in contact inhibition // inferred from mutant phenotype","0001726 // ruffle // inferred from direct assay /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from direct assay /// 0005925 // focal adhesion // inferred from electronic annotation /// 0014704 // intercalated disc // inferred from sequence or structural similarity /// 0014704 // intercalated disc // inferred from electronic annotation /// 0030018 // Z disc // inferred from sequence or structural similarity /// 0030018 // Z disc // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030424 // axon // inferred from sequence or structural similarity /// 0030424 // axon // inferred from electronic annotation /// 0030425 // dendrite // inferred from sequence or structural similarity /// 0030425 // dendrite // inferred from electronic annotation /// 0030426 // growth cone // inferred from electronic annotation /// 0031941 // filamentous actin // non-traceable author statement /// 0031965 // nuclear membrane // inferred from sequence or structural similarity /// 0031965 // nuclear membrane // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005518 // collagen binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation","chr11:77032591-77185365 (-) // 85.0 // q13.5"]
["11731540_at",0.21275377,0.061356068,-0.33777285,0.17108035,-0.06135583,-0.0858438,0.9614771,0.88133943,-1.0204328,-0.02918122,1.0204328,"down","SESTD1",91404.0,"0051925 // regulation of calcium ion transport via voltage-gated calcium channel activity // inferred from mutant phenotype","0034704 // calcium channel complex // inferred from physical interaction","0001786 // phosphatidylserine binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005545 // 1-phosphatidylinositol binding // inferred from direct assay /// 0005546 // phosphatidylinositol-4,5-bisphosphate binding // inferred from direct assay /// 0010314 // phosphatidylinositol-5-phosphate binding // inferred from direct assay /// 0031210 // phosphatidylcholine binding // inferred from direct assay /// 0032266 // phosphatidylinositol-3-phosphate binding // inferred from direct assay /// 0043325 // phosphatidylinositol-3,4-bisphosphate binding // inferred from direct assay /// 0070273 // phosphatidylinositol-4-phosphate binding // inferred from direct assay /// 0070300 // phosphatidic acid binding // inferred from direct assay /// 0080025 // phosphatidylinositol-3,5-bisphosphate binding // inferred from direct assay","chr2:179966420-180129517 (-) // 86.67 // q31.2"]
["11725347_a_at",0.070714,0.057066917,0.0030536652,-0.0030536652,-0.104291916,-0.026015282,0.4176507,0.075751245,1.0629437,0.08806518,1.0629437,"up","TFDP1",7027.0,"0000080 // G1 phase of mitotic cell cycle // traceable author statement /// 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003713 // transcription coactivator activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from physical interaction","chr13:114238987-114295788 (+) // 90.18 // q34"]
["11755375_a_at",-0.19034481,-0.026777506,0.30474544,-0.18658447,0.05789566,0.026777506,0.90062255,0.7207329,1.0447648,0.06317814,1.0447648,"up","DGKH",160851.0,"0007205 // protein kinase C-activating G-protein coupled receptor signaling pathway // inferred from mutant phenotype /// 0007205 // protein kinase C-activating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0051259 // protein oligomerization // inferred from mutant phenotype","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0004143 // diacylglycerol kinase activity // inferred from mutant phenotype /// 0004143 // diacylglycerol kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr13:42729424-42803386 (+) // 96.93 // q14.11"]
["11727314_a_at",-0.009157658,-0.08853388,0.050992012,0.009158134,-0.05550289,0.09383345,0.8583216,0.623832,-1.0220007,-0.031396143,1.0220007,"down","ABCC5",10057.0,"0006200 // ATP catabolic process // inferred from electronic annotation /// 0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0015711 // organic anion transport // traceable author statement /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0032868 // response to insulin stimulus // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005624 // membrane fraction // inferred from direct assay /// 0005624 // membrane fraction // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0005524 // ATP binding // traceable author statement /// 0008514 // organic anion transmembrane transporter activity // traceable author statement /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0042626 // ATPase activity, coupled to transmembrane movement of substances // inferred from electronic annotation","chr3:183637721-183735803 (-) // 99.16 // q27.1"]
["11745576_at",-0.115730286,0.24000692,-0.02192998,0.021930218,0.21767807,-0.06533289,0.95704097,0.8680504,-1.016758,-0.023976292,1.016758,"down","KIRREL3-AS3",283165.0,"","","","chr11:126872804-126875953 (+) // 93.56 // q24.2"]
["11739591_s_at",-0.062874794,-0.0014657974,0.10701656,-0.06503773,0.06503773,0.0014657974,0.94589955,0.8361956,1.009567,0.01373669,1.009567,"up","MINA",84864.0,"0042254 // ribosome biogenesis // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay","","chr3:97660660-97691295 (-) // 99.04 // q11.2"]
["11718486_a_at",0.039575577,0.011140823,0.12873459,-0.04486084,-0.011140823,-0.024457932,0.421797,0.07790555,1.0618919,0.08663692,1.0618919,"up","EI24",9538.0,"0006914 // autophagy // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0006917 // induction of apoptosis // traceable author statement /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0042493 // response to drug // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation","","chr11:125439111-125454579 (+) // 93.48 // q24.2"]
["11736828_x_at",0.099153996,0.0017571449,0.16882277,-0.12076616,-0.0017571449,-0.03159094,0.42344475,0.07881909,1.1028852,0.1412827,1.1028852,"up","ST3GAL1",6482.0,"0006464 // cellular protein modification process // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006486 // protein glycosylation // inferred from electronic annotation /// 0016266 // O-glycan processing // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0000139 // Golgi membrane // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030173 // integral to Golgi membrane // inferred from electronic annotation /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation","0003836 // beta-galactoside (CMP) alpha-2,3-sialyltransferase activity // inferred from electronic annotation /// 0003836 // beta-galactoside (CMP) alpha-2,3-sialyltransferase activity // traceable author statement /// 0008373 // sialyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation","chr8:134467090-134584183 (-) // 90.59 // q24.22"]
["11717923_s_at",0.030508041,0.02012539,0.12082577,-0.046011925,-0.02012539,-0.079164505,0.34270862,0.043578066,1.075932,0.10558693,1.075932,"up","YAP1",10413.0,"0001570 // vasculogenesis // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from direct assay /// 0008283 // cell proliferation // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0010837 // regulation of keratinocyte proliferation // inferred from electronic annotation /// 0030216 // keratinocyte differentiation // inferred from electronic annotation /// 0030857 // negative regulation of epithelial cell differentiation // inferred from electronic annotation /// 0035019 // somatic stem cell maintenance // inferred from electronic annotation /// 0035329 // hippo signaling cascade // traceable author statement /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0046622 // positive regulation of organ growth // inferred from electronic annotation /// 0060242 // contact inhibition // inferred from direct assay /// 0071480 // cellular response to gamma radiation // inferred from direct assay /// 0072091 // regulation of stem cell proliferation // inferred from electronic annotation /// 0090263 // positive regulation of canonical Wnt receptor signaling pathway // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0001076 // RNA polymerase II transcription factor binding transcription factor activity // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from electronic annotation /// 0003714 // transcription corepressor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0070064 // proline-rich region binding // inferred from electronic annotation","chr11:101981209-102104149 (+) // 91.79 // q22.1"]
["11724546_at",-0.010608196,-0.25994778,0.07995033,0.21808147,0.010608196,-0.11217928,0.8005577,0.5053376,-1.0735371,-0.102372065,1.0735371,"down","HCFC2",29915.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0016032 // viral reproduction // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0003713 // transcription coactivator activity // traceable author statement","chr12:104458234-104500299 (+) // 97.11 // q23.3"]
["11730716_a_at",-0.030906439,-0.035884857,-0.24304223,0.20344234,0.21436405,0.0309062,0.36302203,0.051047996,-1.1915576,-0.25284874,1.1915576,"down","PAGE5",90737.0,"","","","chrX:55246788-55250533 (+) // 87.59 // p11.21"]
["11730612_a_at",0.09649801,0.008008003,-0.005656719,0.0056562424,-0.028119087,-0.03408909,0.59189504,0.20578223,1.0365577,0.05180039,1.0365577,"up","MBOAT7",79143.0,"0006644 // phospholipid metabolic process // inferred from electronic annotation /// 0008654 // phospholipid biosynthetic process // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0016747 // transferase activity, transferring acyl groups other than amino-acyl groups // inferred from electronic annotation","chr19:54681993-54693733 (-) // 82.66 // q13.42"]
["11718387_s_at",0.014101028,-0.022716522,-0.020652771,0.0048151016,-0.0035076141,0.0035076141,0.74266934,0.4051373,-1.007906,-0.011361038,1.007906,"down","ZFYVE20",64145.0,"0006810 // transport // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016197 // endosomal transport // non-traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005768 // endosome // non-traceable author statement /// 0005768 // endosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0010008 // endosome membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0017137 // Rab GTPase binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:15111579-15140664 (-) // 84.74 // p25.1"]
["11715842_a_at",-5.1021576E-4,0.013654709,5.1021576E-4,0.044485092,-0.057644844,-0.058564186,0.7737935,0.45577696,1.0199225,0.028459525,1.0199225,"up","MAPK1",5594.0,"0000165 // MAPK cascade // traceable author statement /// 0000165 // MAPK cascade // inferred from electronic annotation /// 0000186 // activation of MAPKK activity // traceable author statement /// 0000187 // activation of MAPK activity // traceable author statement /// 0000189 // MAPK import into nucleus // inferred from electronic annotation /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // traceable author statement /// 0006935 // chemotaxis // traceable author statement /// 0006950 // response to stress // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007265 // Ras protein signal transduction // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008063 // Toll signaling pathway // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0009636 // response to toxin // inferred from electronic annotation /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0010800 // positive regulation of peptidyl-threonine phosphorylation // inferred from direct assay /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from direct assay /// 0019233 // sensory perception of pain // inferred from electronic annotation /// 0019858 // cytosine metabolic process // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0031663 // lipopolysaccharide-mediated signaling pathway // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0032872 // regulation of stress-activated MAPK cascade // traceable author statement /// 0033598 // mammary gland epithelial cell proliferation // inferred from electronic annotation /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0042221 // response to chemical stimulus // inferred from electronic annotation /// 0043330 // response to exogenous dsRNA // inferred from electronic annotation /// 0043627 // response to estrogen stimulus // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045596 // negative regulation of cell differentiation // inferred from electronic annotation /// 0045727 // positive regulation of translation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0050852 // T cell receptor signaling pathway // inferred from electronic annotation /// 0050853 // B cell receptor signaling pathway // inferred from electronic annotation /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // traceable author statement /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0051493 // regulation of cytoskeleton organization // traceable author statement /// 0060397 // JAK-STAT cascade involved in growth hormone signaling pathway // traceable author statement /// 0060716 // labyrinthine layer blood vessel development // inferred from electronic annotation /// 0070371 // ERK1 and ERK2 cascade // inferred from direct assay /// 0070371 // ERK1 and ERK2 cascade // traceable author statement /// 0072584 // caveolin-mediated endocytosis // traceable author statement /// 0090170 // regulation of Golgi inheritance // traceable author statement /// 2000641 // regulation of early endosome to late endosome transport // traceable author statement","0005625 // soluble fraction // inferred from electronic annotation /// 0005626 // insoluble fraction // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005769 // early endosome // traceable author statement /// 0005770 // late endosome // traceable author statement /// 0005794 // Golgi apparatus // traceable author statement /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005856 // cytoskeleton // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005901 // caveola // traceable author statement /// 0005925 // focal adhesion // traceable author statement /// 0031143 // pseudopodium // inferred from electronic annotation /// 0032839 // dendrite cytoplasm // inferred from electronic annotation /// 0033267 // axon part // inferred from electronic annotation /// 0043204 // perikaryon // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0001784 // phosphotyrosine binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004707 // MAP kinase activity // inferred from electronic annotation /// 0004707 // MAP kinase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0008353 // RNA polymerase II carboxy-terminal domain kinase activity // inferred from sequence or structural similarity /// 0008353 // RNA polymerase II carboxy-terminal domain kinase activity // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019902 // phosphatase binding // inferred from physical interaction /// 0031435 // mitogen-activated protein kinase kinase kinase binding // inferred from electronic annotation","chr22:22108791-22221970 (-) // 87.22 // q11.21"]
["11722863_at",0.022530079,0.214252,-0.022530079,-0.11505389,-0.025791645,0.08606696,0.7324496,0.38965654,1.0641319,0.089676924,1.0641319,"up","SCGB2A1",4246.0,"","","0005496 // steroid binding // inferred from electronic annotation /// 0005497 // androgen binding // non-traceable author statement","chr11:61976144-61981415 (+) // 94.72 // q12.3"]
["11751154_x_at",-0.0037698746,0.0037698746,0.14593887,-0.07260609,0.018526077,-0.15621614,0.5489615,0.16563839,1.0857899,0.11874499,1.0857899,"up","ALDOC",230.0,"0001666 // response to hypoxia // inferred from electronic annotation /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0006000 // fructose metabolic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006094 // gluconeogenesis // traceable author statement /// 0006096 // glycolysis // inferred from electronic annotation /// 0006096 // glycolysis // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0010243 // response to organic nitrogen // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0030388 // fructose 1,6-bisphosphate metabolic process // inferred from direct assay /// 0031100 // organ regeneration // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0051289 // protein homotetramerization // inferred from electronic annotation /// 0051290 // protein heterotetramerization // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred by curator /// 0030424 // axon // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004332 // fructose-bisphosphate aldolase activity // inferred from direct assay /// 0004332 // fructose-bisphosphate aldolase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008092 // cytoskeletal protein binding // inferred from direct assay /// 0016829 // lyase activity // inferred from electronic annotation","chr17:26900134-26903912 (-) // 99.42 // q11.2"]
["11726904_a_at",-0.003771782,0.003771782,0.0072422028,-0.010518074,-0.013988495,0.02308178,0.9423139,0.8252795,1.0020045,0.0028889936,1.0020045,"up","COBL",23242.0,"0001843 // neural tube closure // inferred from electronic annotation","","0003779 // actin binding // inferred from electronic annotation","chr7:51083909-51384515 (-) // 99.51 // p12.1"]
["11753940_a_at",-0.08861923,-0.03856969,0.1456976,0.06688523,-0.010560513,0.010560751,0.9475308,0.84006923,-1.0112401,-0.016125614,1.0112401,"down","NRL",4901.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007468 // regulation of rhodopsin gene expression // traceable author statement /// 0007468 // regulation of rhodopsin gene expression // inferred from electronic annotation /// 0007601 // visual perception // inferred from electronic annotation /// 0007601 // visual perception // traceable author statement /// 0045872 // positive regulation of rhodopsin gene expression // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046548 // retinal rod cell development // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043522 // leucine zipper domain binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr14:24549316-24584223 (-) // 91.15 // q11.2"]
["11751357_a_at",-0.041807175,-0.059096813,0.054636,-0.059096813,0.15844393,0.041807175,0.7613903,0.43526956,-1.044255,-0.062474076,1.044255,"down","MEI1",150365.0,"0007126 // meiosis // inferred from electronic annotation /// 0007141 // male meiosis I // inferred from electronic annotation /// 0007276 // gamete generation // inferred from electronic annotation /// 0007286 // spermatid development // inferred from electronic annotation","","","chr22:42148507-42177849 (+) // 98.98 // q13.2"]
["11727430_s_at",-0.0036723614,-0.0057001114,0.0036725998,-0.012369633,0.11998367,0.03178978,0.6572862,0.28278145,-1.0340945,-0.048367966,1.0340945,"down","C6orf162",57150.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr6:88046724-88052041 (+) // 91.8 // q15"]
["11721103_a_at",0.121850014,0.071499825,-0.11128855,-0.005698681,-0.08769035,0.005698204,0.79898065,0.50158095,1.0400003,0.05658397,1.0400003,"up","POLDIP3",84271.0,"0006417 // regulation of translation // inferred from electronic annotation /// 0045727 // positive regulation of translation // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation /// 0035145 // exon-exon junction complex // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr22:42979727-43010962 (-) // 99.49 // q13.2"]
["11755049_a_at",0.0071411133,-0.024471283,-0.04131031,-0.0071411133,0.02148056,0.10467911,0.5641903,0.17927155,-1.0419021,-0.059219677,1.0419021,"down","PIK3C3",5289.0,"0000045 // autophagic vacuole assembly // inferred from electronic annotation /// 0000910 // cytokinesis // inferred from mutant phenotype /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006914 // autophagy // inferred from electronic annotation /// 0007032 // endosome organization // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0036092 // phosphatidylinositol-3-phosphate biosynthetic process // inferred from mutant phenotype /// 0036092 // phosphatidylinositol-3-phosphate biosynthetic process // traceable author statement /// 0036092 // phosphatidylinositol-3-phosphate biosynthetic process // inferred from electronic annotation /// 0043201 // response to leucine // inferred from electronic annotation /// 0045022 // early endosome to late endosome transport // inferred from mutant phenotype /// 0045087 // innate immune response // traceable author statement /// 0046854 // phosphatidylinositol phosphorylation // inferred from electronic annotation /// 0048015 // phosphatidylinositol-mediated signaling // inferred from electronic annotation /// 0050708 // regulation of protein secretion // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0005768 // endosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from direct assay /// 0005770 // late endosome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0030496 // midbody // inferred from direct assay /// 0030496 // midbody // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016303 // 1-phosphatidylinositol-3-kinase activity // inferred from mutant phenotype /// 0016303 // 1-phosphatidylinositol-3-kinase activity // inferred from electronic annotation /// 0016303 // 1-phosphatidylinositol-3-kinase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0016773 // phosphotransferase activity, alcohol group as acceptor // inferred from electronic annotation /// 0035004 // phosphatidylinositol 3-kinase activity // inferred from electronic annotation","chr18:39605275-39661443 (+) // 79.99 // q12.3"]
["11764109_at",-0.05324197,-0.024955511,0.12472749,0.013645887,-0.013645887,0.03268838,0.981864,0.9391924,1.0032033,0.0046139597,1.0032033,"up","","","","","","chr6:163789337-163789753 (-) // 99.52 // q26"]
["11749470_a_at",0.027314186,0.09405732,-0.19741488,-0.027314186,-0.048758507,0.059084892,0.94899637,0.84455776,-1.0137383,-0.019685227,1.0137383,"down","TRPM8",79054.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0006874 // cellular calcium ion homeostasis // inferred from electronic annotation /// 0009266 // response to temperature stimulus // inferred from electronic annotation /// 0009409 // response to cold // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050955 // thermoception // inferred from electronic annotation /// 0051289 // protein homotetramerization // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0070207 // protein homotrimerization // inferred from electronic annotation /// 0070588 // calcium ion transmembrane transport // inferred from electronic annotation","0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005262 // calcium channel activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation","chr2:234826049-234925973 (+) // 96.93 // q37.1"]
["11750933_a_at",0.011934757,-0.30456352,0.06735563,-0.01193428,0.09401417,-0.14938307,0.899722,0.71754026,-1.037173,-0.0526566,1.037173,"down","ZNF480",147657.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:52800431-52826411 (+) // 95.51 // q13.41"]
["11746026_x_at",0.023717403,-0.047858,-0.023717403,-0.03917718,0.29545975,0.028830767,0.7055964,0.34706286,-1.0799694,-0.11099044,1.0799694,"down",-0.023717403,"MILR1",284021.0,"0033004 // negative regulation of mast cell activation // inferred from sequence or structural similarity /// 0043303 // mast cell degranulation // inferred from sequence or structural similarity","0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from sequence or structural similarity"]
["11723087_at",-0.018714905,0.016283035,0.064151764,0.07788706,-0.016282558,-0.03054142,0.9396539,0.818218,1.0071083,0.010218876,1.0071083,"up","GAS2L1",10634.0,"0001578 // microtubule bundle formation // inferred from mutant phenotype /// 0007026 // negative regulation of microtubule depolymerization // inferred from mutant phenotype /// 0007050 // cell cycle arrest // inferred from sequence or structural similarity /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0009267 // cellular response to starvation // inferred from sequence or structural similarity /// 0009267 // cellular response to starvation // inferred from electronic annotation /// 0010629 // negative regulation of gene expression // inferred from direct assay /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0045647 // negative regulation of erythrocyte differentiation // inferred from direct assay /// 0051726 // regulation of cell cycle // inferred from direct assay /// 0097067 // cellular response to thyroid hormone stimulus // inferred from direct assay","0001725 // stress fiber // inferred from direct assay /// 0001725 // stress fiber // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0005874 // microtubule // inferred from electronic annotation","0008017 // microtubule binding // inferred from direct assay /// 0008093 // cytoskeletal adaptor activity // inferred from direct assay /// 0046966 // thyroid hormone receptor binding // inferred from direct assay","chr22:29702346-29708776 (+) // 89.67 // q12.2"]
["11749176_a_at",0.027310371,-0.121572495,0.07585621,-0.021389961,-0.0066194534,0.0066194534,0.9959929,0.98755556,1.0006897,9.947486E-4,1.0006897,"up","RIOK3",8780.0,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0007059 // chromosome segregation // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation","","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr18:21033250-21061544 (+) // 99.95 // q11.2"]
["11719577_a_at",-0.002585411,0.038333416,-0.15976763,0.005314827,-0.071845055,0.002585411,0.9244638,0.7749262,-1.013977,-0.020025,1.013977,"down","AMT",275.0,"0006546 // glycine catabolic process // inferred from electronic annotation /// 0006546 // glycine catabolic process // traceable author statement /// 0032259 // methylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005739 // mitochondrion // traceable author statement","0004047 // aminomethyltransferase activity // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008483 // transaminase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr3:49454210-49460111 (-) // 94.96 // p21.31"]
["11741646_s_at",0.0,0.0,0.062211037,0.0,-0.46196008,-0.1757493,0.5457615,0.16189778,1.1755263,0.23330677,1.1755263,"up","ATXN7L1",222255.0,"","","","chr7:105245220-105319653 (-) // 98.34 // q22.3"]
["11720729_at",-0.04872513,0.06478357,0.012221813,-0.15262604,0.19335508,-0.012221336,0.9997709,0.99946195,-1.0000526,-7.5842356E-5,1.0000526,"down","CSDC2",27254.0,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006398 // histone mRNA 3'-end processing // non-traceable author statement","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // non-traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation","chr22:41956766-41972670 (+) // 96.31 // q13.2"]
["11729235_s_at",0.034490585,-0.071354866,-0.0031561852,0.15148973,-0.023518562,0.0031561852,0.7484818,0.41390508,-1.0403358,-0.05704924,1.0403358,"down","E2F6",1876.0,"0000083 // regulation of transcription involved in G1/S phase of mitotic cell cycle // inferred from electronic annotation /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0071339 // MLL1 complex // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003714 // transcription corepressor activity // traceable author statement","chr2:11584500-11606303 (-) // 83.35 // p25.1"]
["11719930_a_at",0.021856308,-0.011885643,0.059908867,0.011885643,-0.06620312,-0.06787014,0.5021729,0.1285951,1.0453763,0.064022355,1.0453763,"up","ARGLU1",55082.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","","chr13:107194928-107220512 (-) // 94.79 // q33.3"]
["11733612_s_at",-0.10871363,-0.04095936,-0.026211262,0.09093952,0.026211262,0.13108301,0.27341905,0.023623383,-1.102954,-0.14137267,1.102954,"down","DOCK8",81704.0,"0007596 // blood coagulation // traceable author statement","0005829 // cytosol // traceable author statement","0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0051020 // GTPase binding // inferred from electronic annotation","chr9:214864-465255 (+) // 98.62 // p24.3"]
["11745881_a_at",0.12579584,-0.023234367,0.023234367,-0.08494139,0.110574245,-0.054433346,0.8139013,0.5298309,1.0363649,0.05153208,1.0363649,"up","GUCA1A",2978.0,"0007165 // signal transduction // non-traceable author statement /// 0007601 // visual perception // inferred from electronic annotation /// 0007601 // visual perception // traceable author statement /// 0007602 // phototransduction // inferred from electronic annotation /// 0031282 // regulation of guanylate cyclase activity // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation /// 0008048 // calcium sensitive guanylate cyclase activator activity // traceable author statement /// 0008048 // calcium sensitive guanylate cyclase activator activity // inferred from electronic annotation /// 0030249 // guanylate cyclase regulator activity // inferred from electronic annotation","chr6:42123183-42147806 (+) // 92.41 // p21.1"]
["11750096_a_at",-0.03392434,0.014445543,0.024310589,-0.0334723,0.039505243,-0.014445543,0.9622385,0.8836322,1.0030648,0.0044147405,1.0030648,"up","CTNND2",1501.0,"0001763 // morphogenesis of a branching structure // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007158 // neuron cell-cell adhesion // non-traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007612 // learning // inferred from electronic annotation /// 0048167 // regulation of synaptic plasticity // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005912 // adherens junction // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0043204 // perikaryon // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr5:10972992-11904092 (-) // 99.76 // p15.2"]
["11723609_a_at",0.11051464,0.07318401,-0.007863998,0.007863998,-0.12467003,-0.040860176,0.45798084,0.099984944,1.0801015,0.11116688,1.0801015,"up","HABP2",3026.0,"0006508 // proteolysis // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement","0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0005539 // glycosaminoglycan binding // traceable author statement /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr10:115312736-115349367 (+) // 99.84 // q25.3"]
["11727450_a_at",-0.024087906,0.024087906,-0.1597805,0.042795658,-0.06273794,0.073328495,0.7138296,0.35986087,-1.050485,-0.07105558,1.050485,"down","MORN4",118812.0,"","","","chr10:99374311-99393344 (-) // 79.38 // q24.2"]
["11736473_a_at",0.040985584,0.0070147514,0.035271406,-0.22026634,-0.0070147514,-0.010483265,0.59357643,0.20773776,1.0769954,0.10701205,1.0769954,"up","TCF7",6932.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // not recorded /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // not recorded /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006955 // immune response // traceable author statement /// 0007420 // brain development // not recorded /// 0016055 // Wnt receptor signaling pathway // not recorded /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0021915 // neural tube development // inferred from electronic annotation /// 0022008 // neurogenesis // not recorded /// 0030538 // embryonic genitalia morphogenesis // inferred from electronic annotation /// 0033153 // T cell receptor V(D)J recombination // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0046632 // alpha-beta T cell differentiation // inferred from electronic annotation /// 0048557 // embryonic digestive tract morphogenesis // inferred from electronic annotation /// 0048619 // embryonic hindgut morphogenesis // inferred from electronic annotation /// 0048699 // generation of neurons // not recorded /// 0060070 // canonical Wnt receptor signaling pathway // not recorded /// 0071353 // cellular response to interleukin-4 // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // not recorded","0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // not recorded /// 0003700 // sequence-specific DNA binding transcription factor activity // not recorded /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008013 // beta-catenin binding // not recorded /// 0043565 // sequence-specific DNA binding // not recorded /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay","chr5:133451300-133483919 (+) // 89.87 // q31.1"]
["11739863_a_at",0.016730309,0.0037174225,-0.03713417,0.0144815445,-0.0037174225,-0.06343651,0.8897415,0.69631404,1.0083492,0.011995315,1.0083492,"up","TTF2",8458.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006353 // transcription termination, DNA-dependent // traceable author statement /// 0006353 // transcription termination, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0008023 // transcription elongation factor complex // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0008094 // DNA-dependent ATPase activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr1:117602948-117645489 (+) // 89.78 // p13.1"]
["11735984_at",-0.13536406,0.02730751,-0.6313205,0.17719936,-0.02730751,0.1759119,0.5485808,0.16521943,-1.279039,-0.35506028,1.279039,"down","OR2B6",26212.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr6:27925018-27925960 (+) // 99.16 // p22.1"]
["11727105_s_at",0.022793293,-0.022793293,-0.12384796,-0.04881835,0.25790167,0.08511686,0.6167138,0.23118901,-1.1014082,-0.13934931,1.1014082,"down","FGD5",152273.0,"0007010 // cytoskeleton organization // inferred from sequence or structural similarity /// 0008360 // regulation of cell shape // inferred from sequence or structural similarity /// 0030036 // actin cytoskeleton organization // inferred from sequence or structural similarity /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0043088 // regulation of Cdc42 GTPase activity // inferred from sequence or structural similarity /// 0046847 // filopodium assembly // inferred from sequence or structural similarity","0001726 // ruffle // inferred from sequence or structural similarity /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from sequence or structural similarity /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from sequence or structural similarity","0005085 // guanyl-nucleotide exchange factor activity // inferred from sequence or structural similarity /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0031267 // small GTPase binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:14860482-14976072 (+) // 98.53 // p25.1"]
["11756401_x_at",0.012015343,-0.008587837,0.09770775,-0.022316933,-0.0017023087,0.0017023087,0.6593463,0.28539848,1.0289342,0.041150782,1.0289342,"up","FAM49B",51571.0,"","","","chr8:130853718-131028697 (-) // 70.01 // q24.21"]
["11735552_at",0.050317287,0.11875415,-0.11294222,0.049994707,-0.060449123,-0.049994707,0.86550677,0.64123905,1.0273013,0.03885939,1.0273013,"up","FCRL6",343413.0,"","0009897 // external side of plasma membrane // inferred from direct assay /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0019903 // protein phosphatase binding // inferred from electronic annotation","chr1:159770301-159786047 (+) // 84.62 // q23.2"]
["11757770_s_at",-0.008234024,-0.0037641525,0.056272507,-0.021427155,0.066981316,0.0037641525,0.9887081,0.9624078,-1.0011661,-0.0016813541,1.0011661,"down","TOMM70A",9868.0,"0006626 // protein targeting to mitochondrion // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005742 // mitochondrial outer membrane translocase complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008320 // protein transmembrane transporter activity // traceable author statement","chr3:100082307-100082909 (-) // 90.92 // q12.2"]
["11728073_a_at",-0.059504032,-0.010894775,-0.053411484,0.010894775,0.027551174,0.05338478,0.2655409,0.02165616,-1.0510857,-0.07188032,1.0510857,"down","ITPRIP",85450.0,"","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","","chr10:106071900-106093713 (-) // 98.8 // q25.1"]
["11743191_a_at",0.23025465,-0.04706049,0.004799366,0.18676162,-0.15911436,-0.004799366,0.8898519,0.69667685,1.038894,0.05504854,1.038894,"up","LOC100653217 /// NTM","100653217 /// 50863","0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // non-traceable author statement /// 0008038 // neuron recognition // traceable author statement","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031225 // anchored to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr11:131780518-132206715 (+) // 96.55 // q25"]
["11721561_a_at",-0.13100195,-0.008193493,0.06841707,0.00819397,0.15072727,-0.01142168,0.7397124,0.4001776,-1.0517263,-0.07275937,1.0517263,"down","AHCYL2",23382.0,"0006730 // one-carbon metabolic process // inferred from electronic annotation","","0000166 // nucleotide binding // inferred from electronic annotation /// 0004013 // adenosylhomocysteinase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr7:128864870-129070051 (+) // 93.63 // q32.1"]
["11740776_a_at",-0.07460642,0.065404415,-0.20327902,-0.065404415,0.11800718,0.08871126,0.6608797,0.28749838,-1.085178,-0.11793172,1.085178,"down","CCDC36",339834.0,"","","","chr3:49235860-49295537 (+) // 94.67 // p21.31"]
["11750796_a_at",0.008132458,0.025073051,0.008485317,-0.075431824,-0.07085848,-0.008131981,0.34242314,0.043422453,1.046354,0.065371096,1.046354,"up","DNER",92737.0,"0001764 // neuron migration // non-traceable author statement /// 0006897 // endocytosis // non-traceable author statement /// 0007219 // Notch signaling pathway // traceable author statement /// 0007219 // Notch signaling pathway // inferred from electronic annotation /// 0007220 // Notch receptor processing // inferred from electronic annotation /// 0007416 // synapse assembly // non-traceable author statement /// 0007417 // central nervous system development // inferred from expression pattern /// 0010001 // glial cell differentiation // inferred from electronic annotation /// 0048741 // skeletal muscle fiber development // inferred from electronic annotation","0005769 // early endosome // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030425 // dendrite // inferred from direct assay /// 0030425 // dendrite // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // traceable author statement /// 0005112 // Notch binding // inferred from electronic annotation /// 0005509 // calcium ion binding // non-traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0030276 // clathrin binding // traceable author statement","chr2:230222831-230451615 (-) // 97.71 // q36.3"]
["11756636_x_at",0.004617691,-0.0083293915,-0.004617691,0.037721634,0.0865345,-0.03963852,0.769199,0.44875064,-1.0217075,-0.030982282,1.0217075,"down","PCED1A",64773.0,"","","0016787 // hydrolase activity // inferred from electronic annotation","chr20:2816005-2821314 (-) // 93.58 // p13"]
["11730313_a_at",-0.06085205,-0.202075,-0.009050369,0.20369053,0.009050369,0.14336729,0.38975963,0.061976224,-1.1561767,-0.20936188,1.1561767,"down","ERMAP",114625.0,"","0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","","chr1:43282758-43310655 (+) // 82.7 // p34.2"]
["11734540_at",-0.015138388,-0.019844294,0.07287526,0.20644593,-0.10678434,0.015138626,0.9342806,0.80267185,-1.0179282,-0.025635865,1.0179282,"down","LOC728819",728819.0,"","","","chr2:43902291-43903461 (-) // 83.18 // p21"]
["11715925_a_at",0.026748657,0.023631096,0.114108086,-0.03752613,-0.023631096,-0.060587883,0.3300409,0.039008114,1.0683697,0.095411025,1.0683697,"up","TRAM1",23471.0,"0006412 // translation // traceable author statement /// 0006613 // cotranslational protein targeting to membrane // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation","0005783 // endoplasmic reticulum // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0004872 // receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr8:71485454-71520714 (-) // 92.64 // q13.3"]
["11745325_a_at",-0.15657616,0.0011782646,-0.039150238,0.20255852,-0.0011782646,0.031629562,0.52490205,0.1452333,-1.103831,-0.14251937,1.103831,"down","ZNF497",162968.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:58866926-58874214 (-) // 99.96 // q13.43"]
["11752744_a_at",0.013088226,-6.5898895E-4,-0.0022592545,0.033733368,6.5898895E-4,-0.01939106,0.9768119,0.92576224,-1.0011169,-0.0016104063,1.0011169,"down","LGMN",5641.0,"0001101 // response to acid // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0006508 // proteolysis // inferred from sequence or structural similarity /// 0008202 // steroid metabolic process // traceable author statement /// 0040015 // negative regulation of multicellular organism growth // inferred from electronic annotation /// 0042359 // vitamin D metabolic process // traceable author statement /// 0043524 // negative regulation of neuron apoptotic process // inferred from genetic interaction /// 0044281 // small molecule metabolic process // traceable author statement /// 0045087 // innate immune response // traceable author statement","0005764 // lysosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from electronic annotation /// 0043202 // lysosomal lumen // traceable author statement /// 0045177 // apical part of cell // inferred from electronic annotation","0004197 // cysteine-type endopeptidase activity // inferred from electronic annotation /// 0004197 // cysteine-type endopeptidase activity // inferred from sequence or structural similarity /// 0008233 // peptidase activity // inferred from direct assay /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr14:93170472-93214972 (-) // 95.86 // q32.12"]
["11736147_s_at",-0.09450674,-0.04798603,0.12322521,0.025925636,-0.011446953,0.011446953,0.9451003,0.8333366,-1.0104965,-0.0150643205,1.0104965,"down","LYRM2 /// ZC3H11A","57226 /// 9877","","0005739 // mitochondrion // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:90341944-90348475 (-) // 64.9 // q15"]
["11727772_a_at",-0.33264732,0.30242777,-0.13088894,0.13013601,0.06555748,-0.06555748,0.8686345,0.64634514,-1.0696075,-0.09708148,1.0696075,"down","PITPNM2",57605.0,"0006810 // transport // inferred from electronic annotation /// 0008152 // metabolic process // non-traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005625 // soluble fraction // inferred from electronic annotation /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0005509 // calcium ion binding // non-traceable author statement /// 0008289 // lipid binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:123468026-123634562 (-) // 98.54 // q24.31"]
["11747878_a_at",-0.02946043,-0.023031712,0.023031712,0.09160948,0.1770401,-0.08757448,0.75813997,0.42831013,-1.0498465,-0.07017844,1.0498465,"down","STX3",6809.0,"0006810 // transport // inferred from electronic annotation /// 0006836 // neurotransmitter transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006887 // exocytosis // inferred from electronic annotation /// 0006944 // cellular membrane fusion // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from sequence or structural similarity /// 0031175 // neuron projection development // inferred from electronic annotation /// 0034599 // cellular response to oxidative stress // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005773 // vacuole // traceable author statement /// 0005911 // cell-cell junction // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from direct assay /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0030426 // growth cone // inferred from sequence or structural similarity /// 0030426 // growth cone // inferred from electronic annotation /// 0031201 // SNARE complex // inferred from sequence or structural similarity /// 0031201 // SNARE complex // inferred from electronic annotation /// 0042581 // specific granule // inferred from direct assay /// 0042582 // azurophil granule // inferred from direct assay /// 0043005 // neuron projection // inferred from sequence or structural similarity /// 0043005 // neuron projection // inferred from electronic annotation","0005484 // SNAP receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0050544 // arachidonic acid binding // inferred from sequence or structural similarity /// 0050544 // arachidonic acid binding // inferred from electronic annotation","chr11:59522924-59568958 (+) // 96.76 // q12.1"]
["11715826_x_at",5.0735474E-4,-0.03268242,-0.0015869141,0.0050792694,-5.0735474E-4,5.836487E-4,0.6695949,0.2985151,-1.0090324,-0.0129724555,1.0090324,"down","HMG20B",10362.0,"0006325 // chromatin organization // non-traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0016568 // chromatin modification // inferred from electronic annotation","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr19:3572942-3579233 (+) // 92.13 // p13.3"]
["11751973_x_at",-0.04718399,0.13381338,0.0399065,-0.11480951,0.018347263,-0.018346786,0.6609372,0.28755015,1.0573466,0.080448344,1.0573466,"up","PROSAPIP1",9762.0,"0051260 // protein homooligomerization // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from sequence or structural similarity /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0030165 // PDZ domain binding // inferred from electronic annotation /// 0043621 // protein self-association // inferred from electronic annotation","chr20:3143274-3154194 (-) // 95.54 // p13"]
["11720944_at",-0.076687336,-0.04408002,0.108903885,0.09249997,0.04408002,-0.07594991,0.9206134,0.7665029,-1.0168906,-0.024164543,1.0168906,"down","RGS16",6004.0,"0007601 // visual perception // traceable author statement /// 0008277 // regulation of G-protein coupled receptor protein signaling pathway // traceable author statement /// 0009968 // negative regulation of signal transduction // inferred from electronic annotation /// 0038032 // termination of G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // not recorded /// 0043547 // positive regulation of GTPase activity // traceable author statement","0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // not recorded /// 0005886 // plasma membrane // not recorded /// 0045121 // membrane raft // inferred from electronic annotation","0005096 // GTPase activator activity // not recorded /// 0005096 // GTPase activator activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // traceable author statement","chr1:182567757-182573548 (-) // 88.47 // q25.3"]
["11719697_a_at",-0.010606766,-0.059487343,0.036496162,0.010606766,0.019433022,-0.03487873,0.92699623,0.78217125,-1.0066669,-0.009586382,1.0066669,"down","HSPB11",51668.0,"0006950 // response to stress // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation","0005929 // cilium // inferred from electronic annotation /// 0030992 // intraflagellar transport particle B // inferred from electronic annotation","","chr1:54387233-54411602 (-) // 73.84 // p32.3"]
["11750814_a_at",0.0010254383,-0.041886568,-0.0010254383,-0.1513989,0.13496327,0.02447319,0.95131165,0.85355157,-1.0116017,-0.016641347,1.0116017,"down","BEND2",139105.0,"","","","chrX:18189058-18238956 (-) // 92.07 // p22.13"]
["11760040_x_at",0.036525726,-0.017094135,0.017094135,-0.018436909,-0.04498911,0.23722553,0.8665095,0.6426678,-1.0322254,-0.045757994,1.0322254,"down","NDUFB4",4710.0,"0006120 // mitochondrial electron transport, NADH to ubiquinone // non-traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from direct assay /// 0022900 // electron transport chain // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005747 // mitochondrial respiratory chain complex I // inferred from direct assay /// 0005747 // mitochondrial respiratory chain complex I // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0070469 // respiratory chain // inferred from electronic annotation","0008137 // NADH dehydrogenase (ubiquinone) activity // non-traceable author statement /// 0008137 // NADH dehydrogenase (ubiquinone) activity // inferred from electronic annotation","chr3:120315156-120320471 (+) // 99.33 // q13.33"]
["11740214_a_at",0.10931301,0.08971977,0.19412518,-0.08971977,-0.1543293,-0.1618433,0.12042403,0.0024919873,1.202761,0.26635006,1.202761,"up","TBL1X",6907.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006508 // proteolysis // inferred from mutant phenotype /// 0007219 // Notch signaling pathway // traceable author statement /// 0007605 // sensory perception of sound // inferred from mutant phenotype /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from sequence or structural similarity /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0043627 // response to estrogen stimulus // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045444 // fat cell differentiation // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048545 // response to steroid hormone stimulus // inferred from electronic annotation /// 0060070 // canonical Wnt receptor signaling pathway // inferred from mutant phenotype","0000118 // histone deacetylase complex // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005876 // spindle microtubule // inferred from direct assay /// 0017053 // transcriptional repressor complex // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003714 // transcription corepressor activity // inferred from direct assay /// 0003714 // transcription corepressor activity // inferred from genetic interaction /// 0003714 // transcription corepressor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008013 // beta-catenin binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0042393 // histone binding // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from electronic annotation","chrX:9431105-9687780 (+) // 97.47 // p22.31"]
["11723347_a_at",-0.009047508,-0.02109623,0.039645195,-0.03498459,0.009047508,0.018291473,0.94350547,0.82901466,1.0039697,0.005715685,1.0039697,"up","MTERFD1",51001.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay","chr8:97251648-97273828 (-) // 88.33 // q22.1"]
["11738156_a_at",0.08175039,-0.18467331,-0.2893858,0.035971165,0.100072384,-0.035970688,0.6186838,0.23417369,-1.120488,-0.16412726,1.120488,"down","ZBTB26",57684.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:125680378-125693544 (-) // 95.61 // q33.2"]
["11716129_at",-0.010444641,-0.062968254,0.010444641,0.024895668,-0.06314945,0.024817467,0.8816448,0.67505234,-1.01151,-0.016510604,1.01151,"down","IGF2R",3482.0,"0006810 // transport // inferred from electronic annotation /// 0006898 // receptor-mediated endocytosis // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0048009 // insulin-like growth factor receptor signaling pathway // traceable author statement","0005624 // membrane fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005641 // nuclear envelope lumen // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from direct assay /// 0005887 // integral to plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030139 // endocytic vesicle // inferred from direct assay /// 0030140 // trans-Golgi network transport vesicle // inferred from direct assay","0001948 // glycoprotein binding // inferred from direct assay /// 0001948 // glycoprotein binding // inferred from electronic annotation /// 0004872 // receptor activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0005010 // insulin-like growth factor-activated receptor activity // traceable author statement /// 0005215 // transporter activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005520 // insulin-like growth factor binding // inferred from electronic annotation /// 0005537 // mannose binding // inferred from electronic annotation /// 0051219 // phosphoprotein binding // inferred from direct assay","chr6:160390130-160527581 (+) // 98.1 // q25.3"]
["11756882_a_at",0.07900095,0.03866005,-0.07474327,-0.006409645,0.006409645,-0.16876268,0.730928,0.38717034,1.0501243,0.07056009,1.0501243,"up","RTTN",25914.0,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0007368 // determination of left/right symmetry // inferred from electronic annotation","","","chr18:67671044-67863889 (-) // 97.69 // q22.2"]
["11755637_x_at",0.0052776337,-0.048660755,-0.015287876,0.09590292,-0.0052776337,0.006972313,0.6039056,0.21667002,-1.0367655,-0.052089553,1.0367655,"down","ARHGEF10L",55160.0,"0032321 // positive regulation of Rho GTPase activity // inferred from direct assay /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0035104 // positive regulation of transcription via sterol regulatory element binding // inferred from direct assay /// 0051496 // positive regulation of stress fiber assembly // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay","0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005100 // Rho GTPase activator activity // inferred from direct assay","chr1:17941582-18024363 (+) // 89.68 // p36.13"]
["11718996_at",-0.08684158,0.046610355,-0.023291588,-0.10861039,0.023291588,0.21114492,0.830808,0.56391865,-1.0447199,-0.06311624,1.0447199,"down","MSRB2",22921.0,"0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0030091 // protein repair // inferred from sequence or structural similarity /// 0030091 // protein repair // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005739 // mitochondrion // inferred from electronic annotation","0000318 // protein-methionine-R-oxide reductase activity // inferred from sequence or structural similarity /// 0000318 // protein-methionine-R-oxide reductase activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0008113 // peptide-methionine-(S)-S-oxide reductase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from sequence or structural similarity /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr10:23384377-23411276 (+) // 57.95 // p12.2"]
["11742377_at",0.08456993,0.011737585,-0.011737585,-0.03430891,0.10123873,-0.049129725,0.8966756,0.71106637,1.0155467,0.022256555,1.0155467,"up","OR7C2",26658.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr19:15052300-15053260 (+) // 99.69 // p13.12"]
["11736548_s_at",0.09291506,0.029919624,0.050378323,-0.029919147,-0.03815317,-0.03475809,0.18070292,0.007936599,1.0658574,0.09201445,1.0658574,"up","FANCD2",2177.0,"0006281 // DNA repair // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007129 // synapsis // inferred from electronic annotation /// 0007276 // gamete generation // inferred from electronic annotation /// 0010332 // response to gamma radiation // inferred from direct assay","0000793 // condensed chromosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0005515 // protein binding // inferred from physical interaction","chr3:10068070-10141344 (+) // 93.96 // p25.3"]
["11747866_a_at",-0.065820694,-0.051589012,-0.035478115,0.035478115,0.1629796,0.048214912,0.30905756,0.032565113,-1.0967135,-0.13318674,1.0967135,"down","RBL2",5934.0,"0000080 // G1 phase of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0043550 // regulation of lipid kinase activity // inferred from direct assay /// 0051726 // regulation of cell cycle // inferred from electronic annotation","0000785 // chromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr16:53483880-53524532 (+) // 99.86 // q12.2"]
["11719799_a_at",0.023207664,0.04245472,0.16752338,-0.03443432,-0.035258293,-0.023207664,0.41610628,0.07485617,1.0782527,0.10869529,1.0782527,"up","MBD4",8930.0,"0006281 // DNA repair // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006284 // base-excision repair // inferred from electronic annotation /// 0006284 // base-excision repair // traceable author statement /// 0006285 // base-excision repair, AP site formation // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0008630 // DNA damage response, signal transduction resulting in induction of apoptosis // inferred from electronic annotation /// 0009314 // response to radiation // inferred from electronic annotation /// 0045008 // depyrimidination // traceable author statement","0000785 // chromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003696 // satellite DNA binding // traceable author statement /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004520 // endodeoxyribonuclease activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation","chr3:129149788-129159022 (-) // 86.25 // q21.3"]
["11742511_a_at",-0.20059013,-0.04337883,0.19746542,-0.034251213,0.034251213,0.12526655,0.8790938,0.6697985,-1.0404854,-0.057256695,1.0404854,"down","IL4R",3566.0,"0002532 // production of molecular mediator involved in inflammatory response // inferred from electronic annotation /// 0006955 // immune response // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // inferred from electronic annotation /// 0030728 // ovulation // inferred from electronic annotation /// 0035771 // interleukin-4-mediated signaling pathway // traceable author statement /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0043032 // positive regulation of macrophage activation // inferred from electronic annotation /// 0043627 // response to estrogen stimulus // inferred from electronic annotation /// 0045626 // negative regulation of T-helper 1 cell differentiation // inferred from electronic annotation /// 0045630 // positive regulation of T-helper 2 cell differentiation // inferred from electronic annotation /// 0090197 // positive regulation of chemokine secretion // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004896 // cytokine receptor activity // inferred from electronic annotation /// 0004913 // interleukin-4 receptor activity // traceable author statement /// 0005057 // receptor signaling protein activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0043560 // insulin receptor substrate binding // inferred from reviewed computational analysis","chr16:27325250-27364017 (+) // 70.52 // p12.1"]
["11741910_s_at",0.08017564,-0.044983625,0.055858135,0.019084454,-0.019084454,-0.024644852,0.7376686,0.3970774,1.0270917,0.03856505,1.0270917,"up","PKNOX2",63876.0,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from electronic annotation","0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003785 // actin monomer binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0051015 // actin filament binding // inferred from electronic annotation","chr11:125034558-125303282 (+) // 97.22 // q24.2"]
["11759627_at",-0.03332424,-0.11779547,0.17029142,0.047517776,0.03332424,-0.07807398,0.9868992,0.95653,1.0037973,0.00546796,1.0037973,"up","USP15",9958.0,"0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0016579 // protein deubiquitination // inferred from direct assay","","0003824 // catalytic activity // inferred from electronic annotation /// 0004197 // cysteine-type endopeptidase activity // traceable author statement /// 0004221 // ubiquitin thiolesterase activity // inferred from electronic annotation /// 0004843 // ubiquitin-specific protease activity // inferred from direct assay /// 0004843 // ubiquitin-specific protease activity // inferred from electronic annotation /// 0004843 // ubiquitin-specific protease activity // traceable author statement /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr12:62654160-62730474 (+) // 82.6 // q14.1"]
["11718129_x_at",-0.006087303,0.006087303,0.11582756,-0.0836525,0.011704445,-0.07374573,0.5327158,0.15103051,1.0622871,0.087173715,1.0622871,"up","ARL2",402.0,"0006184 // GTP catabolic process // inferred from mutant phenotype /// 0007021 // tubulin complex assembly // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0010811 // positive regulation of cell-substrate adhesion // inferred from sequence or structural similarity /// 0015870 // acetylcholine transport // inferred from electronic annotation /// 0031113 // regulation of microtubule polymerization // inferred from mutant phenotype /// 0031116 // positive regulation of microtubule polymerization // inferred from direct assay /// 0034260 // negative regulation of GTPase activity // inferred from direct assay /// 0051297 // centrosome organization // inferred from mutant phenotype /// 0051457 // maintenance of protein location in nucleus // inferred from direct assay /// 0070830 // tight junction assembly // inferred from sequence or structural similarity","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005758 // mitochondrial intermembrane space // inferred from direct assay /// 0005758 // mitochondrial intermembrane space // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0016328 // lateral plasma membrane // inferred from sequence or structural similarity","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from mutant phenotype /// 0005095 // GTPase inhibitor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from mutant phenotype /// 0005525 // GTP binding // inferred from electronic annotation /// 0019003 // GDP binding // inferred from electronic annotation","chr11:64781423-64789656 (+) // 95.24 // q13.1"]
["11734958_s_at",0.0026745796,-0.07743454,0.06670141,-0.021866322,0.073467255,-0.0026741028,0.9036231,0.72770244,-1.0132535,-0.018995088,1.0132535,"down","C14orf135",64430.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr14:60558544-60601530 (+) // 99.38 // q23.1"]
["11759275_at",0.0,0.050852776,-0.27901602,0.061931133,0.0,-0.10432291,0.85401314,0.61414975,-1.0438569,-0.06192389,1.0438569,"down","OR2M3",127062.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr1:248366331-248367393 (+) // 100.0 // q44"]
["11745871_a_at",0.09199715,0.047002792,0.16029358,-0.120173454,-0.047002792,-0.104846,0.18555166,0.008715049,1.1411105,0.19043855,1.1411105,"up","PAPOLA",10914.0,"0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006378 // mRNA polyadenylation // non-traceable author statement /// 0006397 // mRNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0031123 // RNA 3'-end processing // inferred from electronic annotation /// 0031124 // mRNA 3'-end processing // traceable author statement /// 0043631 // RNA polyadenylation // inferred from sequence or structural similarity /// 0043631 // RNA polyadenylation // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from sequence or structural similarity /// 0003723 // RNA binding // non-traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0004652 // polynucleotide adenylyltransferase activity // inferred from sequence or structural similarity /// 0004652 // polynucleotide adenylyltransferase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from sequence or structural similarity /// 0005524 // ATP binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016779 // nucleotidyltransferase activity // inferred from electronic annotation /// 0030145 // manganese ion binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation","chr14:96968770-97033420 (+) // 97.22 // q32.2"]
["11734814_a_at",0.0018815994,-0.0716033,0.021422863,-0.037806034,0.03964472,-0.0018820763,0.88327855,0.67890614,-1.0112118,-0.016085137,1.0112118,"down","PDE1A",5136.0,"0000042 // protein targeting to Golgi // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007202 // activation of phospholipase C activity // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement","0005829 // cytosol // traceable author statement","0003824 // catalytic activity // inferred from electronic annotation /// 0004114 // 3',5'-cyclic-nucleotide phosphodiesterase activity // inferred from electronic annotation /// 0004117 // calmodulin-dependent cyclic-nucleotide phosphodiesterase activity // traceable author statement /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0008081 // phosphoric diester hydrolase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:183006903-183387425 (-) // 97.1 // q32.1"]
["11722465_a_at",0.07800388,-0.046603203,0.02832079,-0.028321266,-0.03556013,0.043468,0.83629864,0.5776786,1.0186876,0.026711697,1.0186876,"up","C17orf80",55028.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr17:71228867-71245093 (+) // 98.03 // q25.1"]
["11719993_x_at",0.0031981468,4.453659E-4,-4.4584274E-4,-0.037446022,-0.0031981468,0.094387054,0.88799155,0.69173276,-1.0117469,-0.016848404,1.0117469,"down","NLK",51701.0,"0000165 // MAPK cascade // inferred from sequence or structural similarity /// 0000165 // MAPK cascade // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from sequence or structural similarity /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from mutant phenotype /// 0007243 // intracellular protein kinase cascade // inferred from sequence or structural similarity /// 0007243 // intracellular protein kinase cascade // inferred from electronic annotation /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018107 // peptidyl-threonine phosphorylation // inferred from sequence or structural similarity /// 0018107 // peptidyl-threonine phosphorylation // inferred from electronic annotation /// 0030178 // negative regulation of Wnt receptor signaling pathway // inferred from sequence or structural similarity /// 0030178 // negative regulation of Wnt receptor signaling pathway // inferred from electronic annotation /// 0033136 // serine phosphorylation of STAT3 protein // inferred from sequence or structural similarity /// 0033136 // serine phosphorylation of STAT3 protein // inferred from electronic annotation /// 0046777 // protein autophosphorylation // inferred from electronic annotation","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from sequence or structural similarity /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004707 // MAP kinase activity // inferred from sequence or structural similarity /// 0004707 // MAP kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from sequence or structural similarity /// 0005524 // ATP binding // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from physical interaction /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0042169 // SH2 domain binding // inferred from sequence or structural similarity /// 0042169 // SH2 domain binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:26368784-26523402 (+) // 91.63 // q11.2"]
["11733607_a_at",0.1030736,-0.08028984,0.12674212,-0.0029273033,-0.09190464,0.0029273033,0.69173604,0.32781446,1.0573674,0.08047681,1.0573674,"up","LRRC34",151827.0,"","","","chr3:169511268-169530312 (-) // 97.6 // q26.2"]
["11721035_x_at",0.0011639595,0.20569563,-0.02510786,-0.35640144,0.40444136,-0.0011639595,0.9522732,0.85553247,1.0316535,0.044958528,1.0316535,"up","PPP1R3B",79660.0,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0005977 // glycogen metabolic process // inferred from electronic annotation","","","chr8:8993764-9008220 (-) // 88.24 // p23.1"]
["11742980_a_at",-0.033843517,0.033843517,0.05311203,-0.10372925,-0.124706745,0.061813116,0.6860062,0.32030222,1.0520804,0.07324495,1.0520804,"up","ANKS1B",56899.0,"","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0015030 // Cajal body // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0046875 // ephrin receptor binding // inferred from physical interaction","chr12:99137995-99548542 (-) // 97.01 // q23.1"]
["11717748_x_at",-0.028615952,-0.011459351,0.0048980713,-0.0048980713,0.024505615,0.02110672,0.5071694,0.1323189,-1.0176893,-0.025297241,1.0176893,"down","MCTS1",28985.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0040008 // regulation of growth // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation","chrX:119737687-119755014 (+) // 74.21 // q24"]
["11742257_a_at",-0.14990973,-0.0035641193,0.060909748,0.17709064,0.0035643578,-0.14713836,0.90366954,0.72776544,-1.0295593,-0.042026863,1.0295593,"down","PTGER3",5733.0,"0001660 // fever generation // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007188 // adenylate cyclase-modulating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007200 // phospholipase C-activating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007204 // elevation of cytosolic calcium ion concentration // inferred from electronic annotation /// 0008219 // cell death // traceable author statement /// 0015701 // bicarbonate transport // inferred from electronic annotation /// 0030522 // intracellular receptor mediated signaling pathway // traceable author statement /// 0031622 // positive regulation of fever generation // inferred from sequence or structural similarity /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0035810 // positive regulation of urine volume // inferred from electronic annotation","0005635 // nuclear envelope // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // traceable author statement","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004879 // ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity // traceable author statement /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004955 // prostaglandin receptor activity // inferred from electronic annotation /// 0004957 // prostaglandin E receptor activity // inferred from electronic annotation /// 0004957 // prostaglandin E receptor activity // non-traceable author statement /// 0004957 // prostaglandin E receptor activity // traceable author statement","chr1:71418114-71513491 (-) // 92.12 // p31.1"]
["11752824_a_at",-0.006866455,0.006866932,-0.03699732,-0.04138422,0.019503117,0.022976875,0.86272275,0.6328031,-1.0088401,-0.012697504,1.0088401,"down","C17orf61-PLSCR3 /// PLSCR3","100529211 /// 57048","0017121 // phospholipid scrambling // non-traceable author statement /// 0042593 // glucose homeostasis // inferred from electronic annotation /// 0042632 // cholesterol homeostasis // inferred from electronic annotation /// 0071222 // cellular response to lipopolysaccharide // inferred from electronic annotation","0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005509 // calcium ion binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0017128 // phospholipid scramblase activity // non-traceable author statement /// 0048306 // calcium-dependent protein binding // inferred from physical interaction","chr17:7293535-7307414 (-) // 97.7 // p13.1"]
["11751321_a_at",0.05619335,-0.056192875,-0.12858105,0.07780123,-0.25573492,0.08854151,0.9755149,0.92189085,-1.0090955,-0.013062787,1.0090955,"down","CRIM1",51232.0,"0001558 // regulation of cell growth // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0043086 // negative regulation of catalytic activity // inferred from electronic annotation /// 0048009 // insulin-like growth factor receptor signaling pathway // traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0004857 // enzyme inhibitor activity // inferred from electronic annotation /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0005010 // insulin-like growth factor-activated receptor activity // traceable author statement /// 0005520 // insulin-like growth factor binding // inferred from electronic annotation","chr2:36744515-36776110 (+) // 88.26 // p22.2"]
["11756118_s_at",-0.00971508,-0.05693245,0.17637348,0.00971508,0.12791634,-0.03813839,0.99121267,0.97048336,1.0023671,0.0034110239,1.0023671,"up","MLL5",55904.0,"0002446 // neutrophil mediated immunity // inferred from sequence or structural similarity /// 0002446 // neutrophil mediated immunity // inferred from electronic annotation /// 0006306 // DNA methylation // inferred from sequence or structural similarity /// 0006306 // DNA methylation // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0030218 // erythrocyte differentiation // inferred from sequence or structural similarity /// 0030218 // erythrocyte differentiation // inferred from electronic annotation /// 0030854 // positive regulation of granulocyte differentiation // inferred from mutant phenotype /// 0032259 // methylation // inferred from electronic annotation /// 0034968 // histone lysine methylation // inferred from electronic annotation /// 0042119 // neutrophil activation // inferred from sequence or structural similarity /// 0042119 // neutrophil activation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0048384 // retinoic acid receptor signaling pathway // inferred from mutant phenotype /// 0051568 // histone H3-K4 methylation // inferred from direct assay /// 0071300 // cellular response to retinoic acid // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation /// 0070688 // MLL5-L complex // inferred from direct assay","0003713 // transcription coactivator activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0018024 // histone-lysine N-methyltransferase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0042800 // histone methyltransferase activity (H3-K4 specific) // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:104753404-104754527 (+) // 99.05 // q22.3"]
["11728751_a_at",-0.024424076,-0.16682339,0.03531456,0.0244236,-0.056106567,0.07493591,0.7415917,0.40307134,-1.0470971,-0.066395216,1.0470971,"down","OSBP",5007.0,"0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005543 // phospholipid binding // inferred from electronic annotation /// 0008142 // oxysterol binding // traceable author statement /// 0008289 // lipid binding // inferred from electronic annotation","chr11:59341871-59383617 (-) // 94.22 // q12.1"]
["11715402_x_at",0.012207985,0.014091492,0.050759315,-0.048666,-0.012207985,-0.013289452,0.34347886,0.043856353,1.0355573,0.050407343,1.0355573,"up","ILF2",3608.0,"0006351 // transcription, DNA-dependent // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006955 // immune response // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from direct assay","0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003725 // double-stranded RNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr1:153634263-153643471 (-) // 64.49 // q21.3"]
["11760528_at",-0.088012934,-0.16164517,0.015101671,0.2751541,-0.015101671,0.15311456,0.4471445,0.093547866,-1.1614345,-0.21590783,1.1614345,"down","RDM1",201299.0,"0006281 // DNA repair // inferred from electronic annotation /// 0006310 // DNA recombination // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0015030 // Cajal body // inferred from electronic annotation /// 0016605 // PML body // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation","chr17:34249158-34257770 (-) // 85.03 // q12"]
["11744420_at",-0.016867638,0.073913574,0.0505991,-0.04713154,0.0011930466,-0.0011930466,0.56116253,0.17610244,1.0364081,0.05159215,1.0364081,"up","MIR600 /// MIR600HG","693185 /// 81571","","","","chr9:125871772-125877756 (-) // 95.55 // q33.3"]
["11761323_at",-0.10637689,0.14264584,-0.10795808,0.12782097,0.106377125,-0.21438503,0.94594383,0.836479,-1.0213666,-0.03050078,1.0213666,"down","COMMD9",29099.0,"","","","chr11:36296052-36310976 (-) // 89.17 // p13"]
["11744583_s_at",-0.03684187,0.13269234,0.0028748512,0.12780046,-0.002875328,-0.0038762093,0.9741136,0.9173153,-1.0051712,-0.007441212,1.0051712,"down","AMDHD2 /// CEMP1","51005 /// 752014","0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006044 // N-acetylglucosamine metabolic process // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0008448 // N-acetylglucosamine-6-phosphate deacetylase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016810 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds // inferred from electronic annotation","chr16:2570365-2579732 (+) // 99.19 // p13.3"]
["11758184_x_at",-0.06043625,-0.08224964,-0.024564743,0.050780296,0.024564743,0.031763077,0.18070155,0.007865731,-1.0654427,-0.09145298,1.0654427,"down","KRT8",3856.0,"0007010 // cytoskeleton organization // non-traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005882 // intermediate filament // non-traceable author statement /// 0005882 // intermediate filament // inferred from electronic annotation /// 0016363 // nuclear matrix // inferred from electronic annotation /// 0045095 // keratin filament // inferred from electronic annotation","0005198 // structural molecule activity // non-traceable author statement /// 0005198 // structural molecule activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr12:53293746-53298821 (-) // 86.05 // q13.13"]
["11725061_a_at",0.11885929,0.060267925,0.22470474,-0.07431698,-0.060268402,-0.09181547,0.2178713,0.012751613,1.1567504,0.21007764,1.1567504,"up","USP7",7874.0,"0006281 // DNA repair // inferred from electronic annotation /// 0006283 // transcription-coupled nucleotide-excision repair // inferred from mutant phenotype /// 0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0016579 // protein deubiquitination // inferred from direct assay /// 0016579 // protein deubiquitination // inferred from mutant phenotype /// 0031647 // regulation of protein stability // inferred from electronic annotation /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0016605 // PML body // inferred from electronic annotation","0002039 // p53 binding // inferred from direct assay /// 0004197 // cysteine-type endopeptidase activity // traceable author statement /// 0004221 // ubiquitin thiolesterase activity // inferred from mutant phenotype /// 0004221 // ubiquitin thiolesterase activity // inferred from electronic annotation /// 0004843 // ubiquitin-specific protease activity // inferred from direct assay /// 0004843 // ubiquitin-specific protease activity // inferred from mutant phenotype /// 0004843 // ubiquitin-specific protease activity // inferred from electronic annotation /// 0004843 // ubiquitin-specific protease activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from electronic annotation","chr16:8985953-9057341 (-) // 95.32 // p13.2"]
["11751316_x_at",0.1853776,-0.058578968,-0.04091549,0.04091549,0.22983694,-0.06063366,0.9088151,0.7387223,-1.0291204,-0.04141184,1.0291204,"down","EPS8L1",54869.0,"0016310 // phosphorylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation","chr19:55591759-55599057 (+) // 97.73 // q13.42"]
["11719866_at",0.079372406,0.031522274,-0.28974056,-0.024501324,-0.111879826,0.0245018,0.955656,0.8643371,-1.0155929,-0.02232226,1.0155929,"down","SVEP1",79987.0,"0007155 // cell adhesion // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr9:113127527-113342160 (-) // 98.99 // q31.3"]
["11747376_s_at",-0.18297195,-0.121393204,0.044210434,0.034431458,0.090065,-0.034431458,0.58995557,0.20312531,-1.0842819,-0.116739914,1.0842819,"down","CCPG1",9236.0,"0007049 // cell cycle // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 2001106 // regulation of Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr15:55651043-55665781 (-) // 91.73 // q21.3"]
["11740760_at",0.023830414,0.017887115,-0.031723022,0.0043411255,-0.0043411255,-0.1378572,0.72230285,0.37382585,1.0347512,0.04928389,1.0347512,"up","TRPA1",8989.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006811 // ion transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0009409 // response to cold // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042542 // response to hydrogen peroxide // inferred from electronic annotation /// 0048265 // response to pain // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050955 // thermoception // inferred from electronic annotation /// 0050966 // detection of mechanical stimulus involved in sensory perception of pain // inferred from electronic annotation /// 0050968 // detection of chemical stimulus involved in sensory perception of pain // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0070588 // calcium ion transmembrane transport // inferred from electronic annotation","0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0032421 // stereocilium bundle // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005262 // calcium channel activity // inferred from electronic annotation /// 0015267 // channel activity // traceable author statement /// 0015267 // channel activity // inferred from electronic annotation","chr8:72933485-72987852 (-) // 95.44 // q13.3"]
["11719788_s_at",0.0032234192,-0.0032234192,0.06439781,-0.06731415,0.022036552,-0.066622734,0.57006717,0.18426709,1.0415745,0.058766004,1.0415745,"up","TUBB2A",7280.0,"0006184 // GTP catabolic process // inferred from electronic annotation /// 0006457 // protein folding // traceable author statement /// 0007017 // microtubule-based process // inferred from electronic annotation /// 0007018 // microtubule-based movement // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement /// 0051258 // protein polymerization // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0005874 // microtubule // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005198 // structural molecule activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0042277 // peptide binding // inferred from electronic annotation","chr6:3153911-3157809 (-) // 96.98 // p25.2"]
["11751189_x_at",0.06847477,0.026063442,0.27240658,-0.026063442,-0.029613018,-0.118294716,0.44541928,0.092230126,1.1331236,0.18030529,1.1331236,"up","RIMS1",22999.0,"0006461 // protein complex assembly // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006836 // neurotransmitter transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006887 // exocytosis // inferred from electronic annotation /// 0006944 // cellular membrane fusion // non-traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007269 // neurotransmitter secretion // traceable author statement /// 0007601 // visual perception // inferred from electronic annotation /// 0014047 // glutamate secretion // traceable author statement /// 0016079 // synaptic vesicle exocytosis // traceable author statement /// 0017156 // calcium ion-dependent exocytosis // traceable author statement /// 0045055 // regulated secretory pathway // non-traceable author statement /// 0046903 // secretion // non-traceable author statement /// 0048169 // regulation of long-term neuronal synaptic plasticity // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0042734 // presynaptic membrane // inferred from sequence or structural similarity /// 0042734 // presynaptic membrane // non-traceable author statement /// 0042734 // presynaptic membrane // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0005083 // small GTPase regulator activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0017137 // Rab GTPase binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:72970401-73110962 (+) // 92.33 // q13"]
["11748164_a_at",0.024115086,-0.20096946,-0.11898875,0.120527506,0.052050352,-0.024115086,0.5044873,0.13011774,-1.1081107,-0.14810197,1.1081107,"down","VCAN",1462.0,"0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007275 // multicellular organismal development // traceable author statement /// 0007507 // heart development // inferred from electronic annotation /// 0008037 // cell recognition // traceable author statement /// 0008347 // glial cell migration // inferred from direct assay /// 0009611 // response to wounding // inferred from electronic annotation /// 0031103 // axon regeneration // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from sequence or structural similarity","0005509 // calcium ion binding // inferred from electronic annotation /// 0005539 // glycosaminoglycan binding // traceable author statement /// 0005540 // hyaluronic acid binding // inferred from electronic annotation /// 0005540 // hyaluronic acid binding // traceable author statement /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr5:82767582-82876981 (+) // 99.9 // q14.2"]
["11721203_at",-0.04996538,0.04996538,-0.052788973,-0.05770755,0.0854485,0.14875674,0.69691825,0.33500078,-1.0544049,-0.07642892,1.0544049,"down","SCARF2",91179.0,"0007155 // cell adhesion // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr22:20778873-20792146 (-) // 91.56 // q11.21"]
["11735804_x_at",-0.0055475235,0.021802902,0.0055470467,-0.014792919,0.014909744,-0.038307667,0.6803275,0.31265175,1.0139579,0.019997692,1.0139579,"up","NAT6",24142.0,"","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay","0008080 // N-acetyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation","chr3:50333833-50336847 (-) // 98.23 // p21.31"]
["11719412_at",-0.11060953,0.006858349,-0.006858349,0.029232979,0.1669774,-0.06980896,0.71927965,0.36858803,-1.0562882,-0.07900357,1.0562882,"down","PBX1",5087.0,"0001655 // urogenital system development // inferred from electronic annotation /// 0001658 // branching involved in ureteric bud morphogenesis // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006694 // steroid biosynthetic process // inferred from electronic annotation /// 0007548 // sex differentiation // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0009954 // proximal/distal pattern formation // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030278 // regulation of ossification // inferred from electronic annotation /// 0030325 // adrenal gland development // inferred from electronic annotation /// 0030326 // embryonic limb morphogenesis // inferred from electronic annotation /// 0035162 // embryonic hemopoiesis // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048536 // spleen development // inferred from electronic annotation /// 0048538 // thymus development // inferred from electronic annotation /// 0048568 // embryonic organ development // inferred from electronic annotation /// 0048706 // embryonic skeletal system development // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr1:164528434-164821067 (+) // 94.97 // q23.3"]
["11726441_a_at",0.02908659,0.039378643,0.10576153,-0.029087067,-0.040369034,-0.07934904,0.25454938,0.01934565,1.0774921,0.10767731,1.0774921,"up","ERCC6L",54821.0,"0000087 // M phase of mitotic cell cycle // traceable author statement /// 0000236 // mitotic prometaphase // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chrX:71424514-71458897 (-) // 98.01 // q13.1"]
["11761498_at",-0.040390015,0.050477028,-0.30457115,0.040390015,0.3051753,-0.052464962,0.64241743,0.26451787,-1.1454079,-0.19586147,1.1454079,"down","FAM129C",199786.0,"","","0005543 // phospholipid binding // inferred from electronic annotation","chr19:17634109-17660620 (+) // 99.07 // p13.11"]
["11761732_at",0.02114582,-0.051291466,-0.1140275,-0.02114582,0.15215969,0.3078828,0.50567573,0.13148727,-1.1442138,-0.19435664,1.1442138,"down","PILRA",29992.0,"0007165 // signal transduction // inferred from direct assay /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr7:99971150-99972732 (+) // 99.92 // q22.1"]
["11762481_at",-0.083147526,-0.017600536,0.028541565,-0.0029478073,0.0029478073,0.08028412,0.66598827,0.29340655,-1.0358609,-0.05083028,1.0358609,"down","LAMB4",22798.0,"0007155 // cell adhesion // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005604 // basement membrane // inferred from electronic annotation","","chr7:107715982-107763640 (-) // 86.92 // q31.1"]
["11722116_a_at",9.2220306E-4,-0.040420055,-0.15580583,0.05493188,0.22313929,-9.2220306E-4,0.5008768,0.12739195,-1.1153405,-0.15748417,1.1153405,"down","RARB",5915.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001657 // ureteric bud development // inferred from electronic annotation /// 0003417 // growth plate cartilage development // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0021756 // striatum development // inferred from electronic annotation /// 0022008 // neurogenesis // inferred from electronic annotation /// 0032331 // negative regulation of chondrocyte differentiation // inferred from electronic annotation /// 0035116 // embryonic hindlimb morphogenesis // inferred from electronic annotation /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043068 // positive regulation of programmed cell death // inferred from electronic annotation /// 0043401 // steroid hormone mediated signaling pathway // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048048 // embryonic eye morphogenesis // inferred from electronic annotation /// 0048384 // retinoic acid receptor signaling pathway // traceable author statement /// 0048384 // retinoic acid receptor signaling pathway // inferred from electronic annotation /// 0048384 // retinoic acid receptor signaling pathway // inferred from direct assay /// 0048566 // embryonic digestive tract development // inferred from mutant phenotype /// 0055012 // ventricular cardiac muscle cell differentiation // inferred from electronic annotation /// 0061037 // negative regulation of cartilage development // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003707 // steroid hormone receptor activity // inferred from electronic annotation /// 0003708 // retinoic acid receptor activity // inferred from electronic annotation /// 0003708 // retinoic acid receptor activity // traceable author statement /// 0003708 // retinoic acid receptor activity // inferred from direct assay /// 0004872 // receptor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:25469009-25639423 (+) // 95.75 // p24.2"]
["11737598_a_at",-0.05190754,-0.0073399544,0.05127096,0.007340431,0.08032894,-0.18460941,0.91028816,0.7432483,1.0207677,0.029654568,1.0207677,"up","C17orf67",339210.0,"","0005576 // extracellular region // inferred from electronic annotation","","chr17:54869274-54911256 (-) // 82.48 // q22"]
["11728523_a_at",0.010156393,-0.010156393,0.023759604,-0.068020105,0.043330908,-0.09226298,0.6972143,0.335631,1.0330456,0.046904005,1.0330456,"up","MYCL1",4610.0,"0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation","chr1:40361099-40367687 (-) // 97.97 // p34.2"]
["11728439_at",0.02635765,0.1493659,0.16991377,-0.02635765,-0.088560104,-0.17117119,0.28628615,0.02652589,1.1571497,0.21057548,1.1571497,"up","BRWD1",54014.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0007010 // cytoskeleton organization // inferred from mutant phenotype /// 0008360 // regulation of cell shape // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","","chr21:40557818-40685556 (-) // 98.43 // q22.2"]
["11750366_a_at",0.20269775,0.009608746,0.13742185,-0.050400496,-0.009608746,-0.009608746,0.41562217,0.07459238,1.1017387,0.13978209,1.1017387,"up","EPHA6",285220.0,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0048013 // ephrin receptor signaling pathway // inferred from electronic annotation","0005887 // integral to plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005003 // ephrin receptor activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr3:97158434-97356907 (+) // 95.38 // q11.2"]
["11760384_at",-0.017508984,-0.15587854,0.12662315,0.03650427,0.017508984,-0.14221907,0.9660293,0.8961004,1.009621,0.013813858,1.009621,"up","PPP2R5C",5527.0,"0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // inferred from direct assay /// 0007165 // signal transduction // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0016485 // protein processing // inferred from direct assay /// 0042771 // DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis // inferred from mutant phenotype /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from mutant phenotype","0000159 // protein phosphatase type 2A complex // inferred from direct assay /// 0000159 // protein phosphatase type 2A complex // inferred from electronic annotation /// 0000159 // protein phosphatase type 2A complex // non-traceable author statement /// 0000775 // chromosome, centromeric region // inferred from direct assay /// 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from direct assay /// 0008601 // protein phosphatase type 2A regulator activity // inferred from direct assay /// 0008601 // protein phosphatase type 2A regulator activity // inferred from electronic annotation /// 0008601 // protein phosphatase type 2A regulator activity // non-traceable author statement","chr14:102276167-102349570 (+) // 99.53 // q32.31"]
["11737444_a_at",0.20775414,-0.19077373,-0.10230708,0.2484765,0.06488466,-0.06488466,0.7995342,0.50262725,-1.080177,-0.11126766,1.080177,"down","GPR156",165829.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004965 // G-protein coupled GABA receptor activity // inferred from electronic annotation","chr3:119885676-120004242 (-) // 97.27 // q13.33"]
["11723152_a_at",0.050879955,0.012452126,-0.134655,0.03969097,-0.053512573,-0.012452602,0.941189,0.82233375,-1.0104628,-0.015016154,1.0104628,"down","GON4L",54856.0,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation","chr1:155719507-155823598 (-) // 96.24 // q22"]
["11750968_x_at",0.069542885,0.060009956,0.0020971298,-0.045718193,-0.026504517,-0.0020971298,0.3581841,0.04906294,1.0487397,0.0686566,1.0487397,"up","NFIC",4782.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from genetic interaction /// 0006260 // DNA replication // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement","chr19:3381708-3463140 (+) // 92.67 // p13.3"]
["11741727_a_at",0.01258564,-0.11030769,-0.12913322,-0.01258564,0.10117245,0.02384758,0.47911364,0.1120242,-1.0815471,-0.11309655,1.0815471,"down","NEDD1",121441.0,"0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0000242 // pericentriolar material // inferred from electronic annotation /// 0000922 // spindle pole // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005813 // centrosome // inferred from electronic annotation /// 0005814 // centriole // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005932 // microtubule basal body // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from electronic annotation","","chr12:97301243-97347461 (+) // 97.93 // q23.1"]
["11754840_s_at",0.21390891,0.052627087,-0.13567042,0.012206316,-0.084768295,-0.012206554,0.8146955,0.53170943,1.051084,0.07187802,1.051084,"up","LINC00470",56651.0,"","","","chr18:1268311-1276078 (-) // 58.43 // p11.32"]
["11757267_x_at",0.0,-0.008262634,0.09091568,-0.10823059,5.197525E-4,0.0,0.63714325,0.2578609,1.044965,0.06345466,1.044965,"up","SIRT2",22933.0,"0000183 // chromatin silencing at rDNA // non-traceable author statement /// 0006342 // chromatin silencing // non-traceable author statement /// 0006348 // chromatin silencing at telomere // non-traceable author statement /// 0006471 // protein ADP-ribosylation // non-traceable author statement /// 0006471 // protein ADP-ribosylation // traceable author statement /// 0006476 // protein deacetylation // inferred from direct assay /// 0006476 // protein deacetylation // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0007096 // regulation of exit from mitosis // non-traceable author statement /// 0016458 // gene silencing // non-traceable author statement /// 0016575 // histone deacetylation // traceable author statement /// 0042325 // regulation of phosphorylation // non-traceable author statement /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from mutant phenotype /// 0045843 // negative regulation of striated muscle tissue development // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0051301 // cell division // inferred from electronic annotation /// 0051775 // response to redox state // non-traceable author statement","0005677 // chromatin silencing complex // non-traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0005874 // microtubule // inferred from electronic annotation","0003950 // NAD+ ADP-ribosyltransferase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016811 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides // inferred from electronic annotation /// 0017136 // NAD-dependent histone deacetylase activity // inferred from direct assay /// 0033558 // protein deacetylase activity // inferred from direct assay /// 0035035 // histone acetyltransferase binding // inferred from physical interaction /// 0042826 // histone deacetylase binding // inferred from physical interaction /// 0042903 // tubulin deacetylase activity // inferred from direct assay /// 0043130 // ubiquitin binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051287 // NAD binding // inferred from electronic annotation /// 0070403 // NAD+ binding // inferred from direct assay /// 0070403 // NAD+ binding // inferred from electronic annotation","chr19:39369199-39369442 (-) // 35.79 // q13.2"]
["11730333_at",-0.099913836,-0.019663334,-0.06943369,0.02041483,0.13832545,0.019663572,0.37466764,0.05572039,-1.0885983,-0.12247162,1.0885983,"down","DPYSL4",10570.0,"0006208 // pyrimidine base catabolic process // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0007411 // axon guidance // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0016787 // hydrolase activity // inferred from electronic annotation /// 0016810 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds // inferred from electronic annotation /// 0016812 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides // inferred from electronic annotation","chr10:134000403-134019280 (+) // 97.43 // q26.3"]
["11730717_x_at",-0.10769653,-0.04583597,0.20451713,0.20451713,-0.045372963,0.045372963,0.88803524,0.69214296,-1.0361103,-0.05117757,1.0361103,"down","PAGE5",90737.0,"","","","chrX:55246788-55250533 (+) // 87.59 // p11.21"]
["11718361_at",0.1476407,-0.030801296,-0.08031607,0.14911318,0.029252052,-0.029252052,0.8870887,0.6880208,-1.026355,-0.037529863,1.026355,"down","COIL",8161.0,"","0001674 // female germ cell nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0015030 // Cajal body // inferred from direct assay /// 0015030 // Cajal body // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0015036 // disulfide oxidoreductase activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction","chr17:55015559-55038404 (-) // 97.19 // q22"]
["11735219_at",-0.02360773,0.043908358,-0.02325797,-0.0740602,0.116179705,0.02325797,0.9006118,0.72058064,-1.015914,-0.022778226,1.015914,"down","COL10A1",1300.0,"0001501 // skeletal system development // traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005581 // collagen // inferred from electronic annotation /// 0005581 // collagen // traceable author statement /// 0005938 // cell cortex // inferred from electronic annotation","0046872 // metal ion binding // inferred from electronic annotation","chr6:116440084-116447296 (-) // 97.71 // q22.1"]
["11718052_a_at",-0.02621603,-0.108627796,0.0063061714,0.10115814,-0.0063066483,0.052642822,0.48713052,0.11729791,-1.0658547,-0.09201074,1.0658547,"down","TBC1D23",55773.0,"0032313 // regulation of Rab GTPase activity // inferred from electronic annotation /// 0032851 // positive regulation of Rab GTPase activity // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0005097 // Rab GTPase activator activity // inferred from electronic annotation","chr3:99979660-100044095 (+) // 96.18 // q12.1"]
["11749907_a_at",-0.016188145,0.016188145,0.033690453,-0.05855751,0.118149996,-0.034230232,0.98894,0.96361417,1.0019261,0.0027760512,1.0019261,"up","TRIM63",84676.0,"0007165 // signal transduction // non-traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005874 // microtubule // non-traceable author statement","0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0004871 // signal transducer activity // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0031432 // titin binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:26378141-26394121 (-) // 100.0 // p36.11"]
["11739616_x_at",0.050665855,0.023691654,0.056135178,-0.09863615,-0.16011095,-0.023691654,0.29043186,0.027735436,1.100107,0.13764378,1.100107,"up","CD3EAP",10849.0,"0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // traceable author statement /// 0009303 // rRNA transcription // inferred from electronic annotation /// 0009303 // rRNA transcription // traceable author statement","0000120 // RNA polymerase I transcription factor complex // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005730 // nucleolus // traceable author statement /// 0005736 // DNA-directed RNA polymerase I complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay","0003899 // DNA-directed RNA polymerase activity // inferred from electronic annotation","chr19:45909386-45955388 (+) // 71.15 // q13.32"]
["11737631_a_at",0.006085634,-0.04165244,0.056969643,-0.006085634,0.13907313,-0.058106422,0.93278366,0.7990082,-1.0124327,-0.017826002,1.0124327,"down","SLC26A7",115111.0,"0001696 // gastric acid secretion // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006811 // ion transport // inferred from electronic annotation /// 0006820 // anion transport // inferred from electronic annotation /// 0006821 // chloride transport // inferred from direct assay /// 0006821 // chloride transport // inferred from electronic annotation /// 0008272 // sulfate transport // inferred from direct assay /// 0008272 // sulfate transport // inferred from electronic annotation /// 0015701 // bicarbonate transport // inferred from sequence or structural similarity /// 0015701 // bicarbonate transport // inferred from electronic annotation /// 0019532 // oxalate transport // inferred from direct assay /// 0055085 // transmembrane transport // traceable author statement","0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from mutant phenotype /// 0016323 // basolateral plasma membrane // inferred from sequence or structural similarity /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0055038 // recycling endosome membrane // inferred from electronic annotation","0005253 // anion channel activity // inferred from electronic annotation /// 0005254 // chloride channel activity // inferred from direct assay /// 0005254 // chloride channel activity // inferred from electronic annotation /// 0015106 // bicarbonate transmembrane transporter activity // inferred from sequence or structural similarity /// 0015106 // bicarbonate transmembrane transporter activity // inferred from electronic annotation /// 0015116 // sulfate transmembrane transporter activity // inferred from direct assay /// 0015116 // sulfate transmembrane transporter activity // inferred from electronic annotation /// 0015301 // anion:anion antiporter activity // inferred from electronic annotation /// 0019531 // oxalate transmembrane transporter activity // inferred from direct assay","chr8:92261515-92406946 (+) // 99.4 // q21.3"]
["11723861_a_at",-0.04382968,0.008373976,0.20322251,-0.17847347,0.027482033,-0.008373976,0.69315565,0.330026,1.0785134,0.109044075,1.0785134,"up","ATP8A1",10396.0,"0006812 // cation transport // inferred from electronic annotation /// 0015914 // phospholipid transport // inferred from electronic annotation /// 0015917 // aminophospholipid transport // non-traceable author statement /// 0034220 // ion transmembrane transport // traceable author statement /// 0045332 // phospholipid translocation // non-traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0042584 // chromaffin granule membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0004012 // phospholipid-translocating ATPase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // non-traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0015247 // aminophospholipid transporter activity // non-traceable author statement /// 0015662 // ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016820 // hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances // inferred from electronic annotation /// 0019829 // cation-transporting ATPase activity // non-traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation","chr4:42410393-42659122 (-) // 99.5 // p13"]
["11733619_a_at",0.050167322,-0.13337255,0.15187335,0.08871317,-0.09209132,-0.050167084,0.8935553,0.70392174,1.0286397,0.040737703,1.0286397,"up","ACVR1C",130399.0,"0002021 // response to dietary excess // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred by curator /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007178 // transmembrane receptor protein serine/threonine kinase signaling pathway // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0009749 // response to glucose stimulus // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0019915 // lipid storage // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from direct assay /// 0032868 // response to insulin stimulus // inferred from electronic annotation /// 0038092 // nodal signaling pathway // inferred from mutant phenotype /// 0042981 // regulation of apoptotic process // inferred from direct assay /// 0043280 // positive regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from mutant phenotype /// 0046676 // negative regulation of insulin secretion // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0048179 // activin receptor complex // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004675 // transmembrane receptor protein serine/threonine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005024 // transforming growth factor beta-activated receptor activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016361 // activin receptor activity, type I // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred by curator /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:158383279-158485517 (-) // 93.9 // q24.1"]
["11716864_s_at",0.03659153,0.092448235,-0.027445793,-0.046419144,-0.057501793,0.027445793,0.62878495,0.24602747,1.0420008,0.059356343,1.0420008,"up","NISCH",11188.0,"0006006 // glucose metabolic process // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007154 // cell communication // inferred from electronic annotation /// 0008217 // regulation of blood pressure // inferred from electronic annotation /// 0016601 // Rac protein signal transduction // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // inferred from electronic annotation /// 0032228 // regulation of synaptic transmission, GABAergic // inferred from electronic annotation /// 0048243 // norepinephrine secretion // inferred from electronic annotation","0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0055037 // recycling endosome // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005178 // integrin binding // inferred from electronic annotation /// 0008227 // G-protein coupled amine receptor activity // inferred from electronic annotation /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation","chr3:52489518-52527084 (+) // 90.72 // p21.1"]
["200062_PM_s_at",-0.0146894455,-0.029646873,0.042419434,0.005962372,0.024518013,-0.005962372,0.9040966,0.7286956,-1.0061264,-0.008811568,1.0061264,"down","RPL30",6156.0,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0007059 // chromosome segregation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral infectious cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0003735 // structural constituent of ribosome // traceable author statement /// 0003735 // structural constituent of ribosome // inferred from electronic annotation","chr8:99053953-99057752 (-) // 98.74 // q22.2"]
["11740326_x_at",-0.053361893,0.040608406,0.0063490868,-0.042663813,-0.0063488483,0.0836463,0.92732453,0.78331184,-1.0095268,-0.01367928,1.0095268,"down","SORBS2",8470.0,"","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement /// 0030018 // Z disc // non-traceable author statement /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005200 // structural constituent of cytoskeleton // traceable author statement /// 0008093 // cytoskeletal adaptor activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008307 // structural constituent of muscle // traceable author statement","chr4:186506597-186697679 (-) // 93.63 // q35.1"]
["11725830_a_at",-9.069443E-4,0.08586645,0.08284712,-0.063803196,-0.1326437,9.074211E-4,0.3958099,0.0648024,1.0875753,0.12111531,1.0875753,"up","PLCL2",23228.0,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0004435 // phosphatidylinositol phospholipase C activity // inferred from electronic annotation /// 0004629 // phospholipase C activity // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0008081 // phosphoric diester hydrolase activity // inferred from electronic annotation","chr3:16926451-17132090 (+) // 97.8 // p24.3"]
["11726721_x_at",0.01971817,0.039268494,-0.01971817,-0.03898239,-0.023765564,0.045093536,0.8354169,0.5752662,1.0132389,0.01897438,1.0132389,"up","MPG",4350.0,"0006281 // DNA repair // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006284 // base-excision repair // inferred from electronic annotation /// 0006284 // base-excision repair // traceable author statement /// 0006285 // base-excision repair, AP site formation // traceable author statement /// 0006307 // DNA dealkylation involved in DNA repair // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0045007 // depurination // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0003677 // DNA binding // inferred from electronic annotation /// 0003684 // damaged DNA binding // traceable author statement /// 0003824 // catalytic activity // inferred from electronic annotation /// 0003905 // alkylbase DNA N-glycosylase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008725 // DNA-3-methyladenine glycosylase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0043916 // DNA-7-methylguanine glycosylase activity // inferred from electronic annotation /// 0052821 // DNA-7-methyladenine glycosylase activity // inferred from electronic annotation /// 0052822 // DNA-3-methylguanine glycosylase activity // inferred from electronic annotation","chr16:128168-135837 (+) // 86.65 // p13.3"]
["11743357_a_at",0.031326294,-0.04698944,0.035017967,-0.009977341,0.009977341,-0.035355568,0.83484083,0.57345706,1.0127211,0.01823686,1.0127211,"up","ZBTB40",9923.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from direct assay /// 0030282 // bone mineralization // non-traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:22778343-22857647 (+) // 92.76 // p36.12"]
["11758895_at",0.05586362,-0.033383846,0.033383846,-0.12636542,-0.05345869,0.1704421,0.9427819,0.82700604,1.0151892,0.021748584,1.0151892,"up","EIF2S2",8894.0,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0002176 // male germ cell proliferation // inferred from electronic annotation /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred from direct assay /// 0006413 // translational initiation // traceable author statement /// 0006413 // translational initiation // inferred from electronic annotation /// 0008584 // male gonad development // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005829 // cytosol // traceable author statement /// 0005850 // eukaryotic translation initiation factor 2 complex // traceable author statement","0003723 // RNA binding // traceable author statement /// 0003743 // translation initiation factor activity // inferred from direct assay /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008135 // translation factor activity, nucleic acid binding // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation","chr20:32676110-32700084 (-) // 79.39 // q11.22"]
["11753852_a_at",-0.25735426,-0.04157877,0.076725245,0.04157877,0.17221951,-0.1272614,0.7859479,0.47503746,-1.0739411,-0.102914885,1.0739411,"down","NNAT",4826.0,"0006810 // transport // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0007420 // brain development // traceable author statement /// 0009249 // protein lipoylation // traceable author statement /// 0009749 // response to glucose stimulus // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0032024 // positive regulation of insulin secretion // inferred from electronic annotation /// 0032880 // regulation of protein localization // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","","chr20:36149733-36151159 (+) // 98.78 // q11.23"]
["11730804_s_at",-0.016901016,-0.055576324,0.0164814,0.0060863495,0.045186996,-0.0060863495,0.6415995,0.26332673,-1.0236536,-0.033727635,1.0236536,"down","PRPF38B",55119.0,"0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005681 // spliceosomal complex // inferred from electronic annotation","","chr1:109234913-109244745 (+) // 90.54 // p13.3"]
["11736428_at",0.008394718,0.080313206,-0.008394718,-0.0924778,-0.06566286,0.16684914,0.9319883,0.7967606,1.0166818,0.023868203,1.0166818,"up","STYX",6815.0,"0006470 // protein dephosphorylation // not recorded /// 0007283 // spermatogenesis // not recorded /// 0016311 // dephosphorylation // inferred from electronic annotation","0005737 // cytoplasm // not recorded","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0008138 // protein tyrosine/serine/threonine phosphatase activity // not recorded /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation","chr14:53196877-53241703 (+) // 92.63 // q22.1"]
["11734349_a_at",0.037991524,0.11475372,0.17399788,-0.13057518,-0.037991524,-0.079603195,0.23672597,0.015797196,1.1420593,0.19163759,1.1420593,"up","TRIM11",81559.0,"0009615 // response to virus // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0050768 // negative regulation of neurogenesis // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:228581378-228594541 (-) // 97.53 // q42.13"]
["11744180_a_at",0.0030927658,-0.012905121,2.0599365E-4,-2.0599365E-4,-0.055252075,0.019220352,0.8996349,0.717322,1.0061721,0.008877035,1.0061721,"up","TCIRG1",10312.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // traceable author statement /// 0006968 // cellular defense response // traceable author statement /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0015991 // ATP hydrolysis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport // traceable author statement /// 0015992 // proton transport // inferred from electronic annotation /// 0033572 // transferrin transport // traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0000220 // vacuolar proton-transporting V-type ATPase, V0 domain // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0010008 // endosome membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from direct assay /// 0033177 // proton-transporting two-sector ATPase complex, proton-transporting domain // inferred from electronic annotation","0005215 // transporter activity // traceable author statement /// 0015078 // hydrogen ion transmembrane transporter activity // inferred from electronic annotation","chr11:67806461-67818366 (+) // 95.4 // q13.2"]
["11753358_a_at",-0.07105827,-0.1269188,0.023767948,0.119957924,0.21789598,-0.023767948,0.4930548,0.12082532,-1.1194305,-0.16276501,1.1194305,"down","ACVR1",90.0,"0000082 // G1/S transition of mitotic cell cycle // inferred from mutant phenotype /// 0001569 // patterning of blood vessels // inferred from electronic annotation /// 0001655 // urogenital system development // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001702 // gastrulation with mouth forming second // inferred from electronic annotation /// 0001707 // mesoderm formation // inferred from electronic annotation /// 0001755 // neural crest cell migration // inferred from electronic annotation /// 0002526 // acute inflammatory response // inferred from electronic annotation /// 0003143 // embryonic heart tube morphogenesis // inferred from mutant phenotype /// 0003183 // mitral valve morphogenesis // inferred from mutant phenotype /// 0003197 // endocardial cushion development // inferred from mutant phenotype /// 0003289 // atrial septum primum morphogenesis // inferred from mutant phenotype /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007178 // transmembrane receptor protein serine/threonine kinase signaling pathway // inferred from reviewed computational analysis /// 0007178 // transmembrane receptor protein serine/threonine kinase signaling pathway // inferred from electronic annotation /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from direct assay /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0007281 // germ cell development // inferred from electronic annotation /// 0007368 // determination of left/right symmetry // inferred from electronic annotation /// 0007369 // gastrulation // inferred from electronic annotation /// 0007498 // mesoderm development // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0009968 // negative regulation of signal transduction // inferred from mutant phenotype /// 0010862 // positive regulation of pathway-restricted SMAD protein phosphorylation // inferred from direct assay /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018107 // peptidyl-threonine phosphorylation // inferred from direct assay /// 0023014 // signal transduction by phosphorylation // inferred from electronic annotation /// 0030278 // regulation of ossification // inferred from mutant phenotype /// 0030501 // positive regulation of bone mineralization // inferred from mutant phenotype /// 0030509 // BMP signaling pathway // inferred from direct assay /// 0032924 // activin receptor signaling pathway // inferred from direct assay /// 0032926 // negative regulation of activin receptor signaling pathway // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0045669 // positive regulation of osteoblast differentiation // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0048641 // regulation of skeletal muscle tissue development // inferred from electronic annotation /// 0051145 // smooth muscle cell differentiation // inferred from electronic annotation /// 0060037 // pharyngeal system development // inferred from electronic annotation /// 0060389 // pathway-restricted SMAD protein phosphorylation // inferred from direct assay /// 0060923 // cardiac muscle cell fate commitment // inferred from mutant phenotype /// 0071385 // cellular response to glucocorticoid stimulus // inferred from electronic annotation /// 2000017 // positive regulation of determination of dorsal identity // inferred from direct assay","0005887 // integral to plasma membrane // inferred from direct assay /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from electronic annotation /// 0048179 // activin receptor complex // inferred from direct assay /// 0048179 // activin receptor complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004675 // transmembrane receptor protein serine/threonine kinase activity // inferred from reviewed computational analysis /// 0004675 // transmembrane receptor protein serine/threonine kinase activity // inferred from electronic annotation /// 0004702 // receptor signaling protein serine/threonine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005024 // transforming growth factor beta-activated receptor activity // inferred from electronic annotation /// 0005025 // transforming growth factor beta receptor activity, type I // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016361 // activin receptor activity, type I // inferred from direct assay /// 0016361 // activin receptor activity, type I // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019838 // growth factor binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046332 // SMAD binding // inferred from direct assay /// 0046332 // SMAD binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0048185 // activin binding // inferred from direct assay /// 0048185 // activin binding // inferred from electronic annotation /// 0050431 // transforming growth factor beta binding // inferred from direct assay /// 0050431 // transforming growth factor beta binding // inferred from electronic annotation","chr2:158622578-158732342 (-) // 99.9 // q24.1"]
["11754542_x_at",-0.037727833,-0.028095722,0.037727356,-0.02637291,0.04215002,0.02637291,0.7968937,0.49838975,-1.0163628,-0.023415457,1.0163628,"down","ZNF594",84622.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:5082830-5095157 (-) // 81.09 // p13.2"]
["11736640_a_at",0.08110666,5.1641464E-4,0.03870058,-0.11346531,-0.092648506,-5.1641464E-4,0.38387272,0.05953738,1.0784689,0.1089846,1.0784689,"up","ESRP2",80004.0,"0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0043484 // regulation of RNA splicing // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003729 // mRNA binding // inferred from direct assay","chr16:68262449-68270487 (-) // 95.98 // q22.1"]
["11763281_s_at",0.046042442,-0.22533274,0.04873371,0.24640083,-0.39819288,-0.046042442,0.9747026,0.9190758,1.0156659,0.022425894,1.0156659,"up","RPL23AP7 /// RPL23AP82","118433 /// 284942","0006412 // translation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005840 // ribosome // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // inferred from electronic annotation","chr2:114367303-114384617 (-) // 33.97 // q13"]
["11737624_a_at",0.12510014,-0.011269808,0.039431095,0.011270046,-0.013540506,-0.06999493,0.5663674,0.18122151,1.0534892,0.07517553,1.0534892,"up","GAB2",9846.0,"0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from direct assay /// 0007229 // integrin-mediated signaling pathway // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0016477 // cell migration // inferred from electronic annotation /// 0030316 // osteoclast differentiation // inferred from mutant phenotype /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0043306 // positive regulation of mast cell degranulation // inferred from sequence or structural similarity /// 0048015 // phosphatidylinositol-mediated signaling // inferred from sequence or structural similarity","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0005068 // transmembrane receptor protein tyrosine kinase adaptor activity // inferred from direct assay /// 0005070 // SH3/SH2 adaptor activity // inferred from reviewed computational analysis /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0005547 // phosphatidylinositol-3,4,5-trisphosphate binding // inferred from sequence or structural similarity /// 0043325 // phosphatidylinositol-3,4-bisphosphate binding // inferred from sequence or structural similarity","chr11:77926341-78128862 (-) // 93.28 // q14.1"]
["11719362_at",0.05585289,0.11333418,9.088516E-4,-0.022036076,-0.0785265,-9.083748E-4,0.43546602,0.08572923,1.0647556,0.09052226,1.0647556,"up","FAM178A",55719.0,"","","","chr10:102672325-102724889 (+) // 98.28 // q24.31"]
["11730351_at",-0.0057611465,0.057368755,0.12985325,-0.24694347,0.0057611465,-0.05851412,0.50869054,0.13341606,1.1175859,0.16038571,1.1175859,"up","ANKRD52",283373.0,"","","","chr12:56631590-56652175 (-) // 98.74 // q13.3"]
["11718611_at",0.09812069,0.18555832,-0.11700153,-0.0420475,-0.04662037,0.0420475,0.7941041,0.49327034,1.0505168,0.071099296,1.0505168,"up","TP53INP1",94241.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006914 // autophagy // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0006950 // response to stress // traceable author statement /// 0006950 // response to stress // inferred from electronic annotation /// 0007050 // cell cycle arrest // traceable author statement /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from sequence or structural similarity /// 0010508 // positive regulation of autophagy // inferred from mutant phenotype /// 0030336 // negative regulation of cell migration // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0048102 // autophagic cell death // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005776 // autophagic vacuole // inferred from direct assay /// 0005776 // autophagic vacuole // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0016605 // PML body // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0016209 // antioxidant activity // inferred from sequence or structural similarity /// 0016209 // antioxidant activity // inferred from electronic annotation","chr8:95938199-95961726 (-) // 92.51 // q22.1"]
["11739232_x_at",0.21843481,0.09899521,0.031193733,-0.28004456,-0.09966564,-0.031193733,0.36487523,0.051617075,1.1918279,0.2531759,1.1918279,"up","RASSF2",9770.0,"0007049 // cell cycle // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr20:4760668-4803050 (-) // 90.41 // p13"]
["AFFX-HSAC07/X00351_3_at",0.033842087,0.02205658,0.061048508,-0.045274734,-0.022055626,-0.06272602,0.17878897,0.00753487,1.0587299,0.08233456,1.0587299,"up",0.061048508,"ACTB /// ACTB /// LOC100505829","100505829 /// 60","0006457 // protein folding // traceable author statement /// 0006928 // cellular component movement // traceable author statement /// 0007409 // axonogenesis // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0034329 // cell junction assembly // traceable author statement /// 0034332 // adherens junction organization // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045214 // sarcomere organization // inferred from electronic annotation /// 0045216 // cell-cell junction organization // traceable author statement /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement /// 0051592 // response to calcium ion // inferred from electronic annotation","0005625 // soluble fraction // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005856 // cytoskeleton // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0030016 // myofibril // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0030863 // cortical cytoskeleton // inferred from electronic annotation /// 0031941 // filamentous actin // inferred from electronic annotation /// 0035267 // NuA4 histone acetyltransferase complex // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation /// 0070688 // MLL5-L complex // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0005200 // structural constituent of cytoskeleton // traceable author statement /// 0005200 // structural constituent of cytoskeleton // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0019894 // kinesin binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0030957 // Tat protein binding // inferred from physical interaction /// 0050998 // nitric-oxide synthase binding // inferred from physical interaction"]
["11728692_a_at",-0.024590015,0.05006218,-0.078639984,-0.049776554,0.037704945,0.024590015,0.87500954,0.6602385,-1.0152925,-0.021895455,1.0152925,"down","LOC728802 /// PDE4DIP","728802 /// 9659","0043623 // cellular protein complex assembly // inferred from sequence or structural similarity","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from sequence or structural similarity /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005813 // centrosome // inferred from sequence or structural similarity /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0030016 // myofibril // inferred from sequence or structural similarity","0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from sequence or structural similarity","chr1:144890591-144932455 (-) // 99.45 // q21.1"]
["11742877_x_at",0.008794785,-0.084430695,-0.094680786,0.07488155,-0.008794785,0.019404888,0.47003186,0.10654796,-1.0608859,-0.08526951,1.0608859,"down","SGSM3",27352.0,"0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0032313 // regulation of Rab GTPase activity // inferred from electronic annotation /// 0032483 // regulation of Rab protein signal transduction // inferred from expression pattern /// 0032486 // Rap protein signal transduction // inferred from expression pattern /// 0032851 // positive regulation of Rab GTPase activity // inferred from electronic annotation /// 0045732 // positive regulation of protein catabolic process // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005921 // gap junction // inferred from electronic annotation","0005097 // Rab GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0017137 // Rab GTPase binding // inferred from direct assay","chr22:40766588-40806289 (+) // 95.74 // q13.1"]
["11747293_a_at",-0.0475204,0.092945814,0.010334492,0.09211922,-0.083640814,-0.010334253,0.92727697,0.78318465,1.013401,0.019205201,1.013401,"up","CD1B",910.0,"0006955 // immune response // inferred from electronic annotation /// 0019882 // antigen processing and presentation // inferred from electronic annotation","0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0005515 // protein binding // inferred from physical interaction","chr1:158300085-158301828 (-) // 95.85 // q23.1"]
["11742860_a_at",0.2178657,0.08911443,-0.049259186,-0.013885975,-0.058116436,0.013885975,0.63744336,0.25816488,1.0757025,0.1052792,1.0757025,"up","GPR116",221395.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007218 // neuropeptide signaling pathway // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement","chr6:46820246-46889742 (-) // 98.41 // p12.3"]
["11745498_a_at",-0.009242058,0.0038337708,0.07725906,-0.0038337708,-0.060305595,0.06668377,0.8645871,0.6386515,1.016142,0.02310204,1.016142,"up","IRF3",3661.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006917 // induction of apoptosis // traceable author statement /// 0006974 // response to DNA damage stimulus // traceable author statement /// 0008063 // Toll signaling pathway // traceable author statement /// 0009615 // response to virus // inferred from electronic annotation /// 0009617 // response to bacterium // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0031663 // lipopolysaccharide-mediated signaling pathway // inferred from electronic annotation /// 0032480 // negative regulation of type I interferon production // traceable author statement /// 0032481 // positive regulation of type I interferon production // traceable author statement /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0032727 // positive regulation of interferon-alpha production // inferred from sequence or structural similarity /// 0032728 // positive regulation of interferon-beta production // inferred from sequence or structural similarity /// 0032728 // positive regulation of interferon-beta production // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0039530 // MDA-5 signaling pathway // traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from electronic annotation /// 0043330 // response to exogenous dsRNA // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation /// 0045351 // type I interferon biosynthetic process // inferred from electronic annotation /// 0045358 // negative regulation of interferon-beta biosynthetic process // inferred from electronic annotation /// 0050689 // negative regulation of defense response to virus by host // inferred from electronic annotation /// 0050715 // positive regulation of cytokine secretion // inferred from electronic annotation /// 0051607 // defense response to virus // inferred from sequence or structural similarity /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060337 // type I interferon-mediated signaling pathway // traceable author statement /// 0071359 // cellular response to dsRNA // inferred from electronic annotation /// 0071888 // macrophage apoptotic process // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0010008 // endosome membrane // traceable author statement","0000975 // regulatory region DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003712 // transcription cofactor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from electronic annotation","chr19:50162904-50169116 (-) // 94.82 // q13.33"]
["11726129_at",0.01226306,0.04761505,-0.01226306,-0.12888932,0.15224338,-0.02735591,0.9499025,0.8477236,1.0119975,0.01720567,1.0119975,"up","HBZ",3050.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0015671 // oxygen transport // traceable author statement /// 0015671 // oxygen transport // inferred from electronic annotation /// 0043249 // erythrocyte maturation // inferred from electronic annotation","0005833 // hemoglobin complex // inferred from electronic annotation /// 0005833 // hemoglobin complex // traceable author statement","0005344 // oxygen transporter activity // inferred from electronic annotation /// 0005344 // oxygen transporter activity // traceable author statement /// 0005506 // iron ion binding // inferred from electronic annotation /// 0019825 // oxygen binding // inferred from electronic annotation /// 0020037 // heme binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:202683-204505 (+) // 92.67 // p13.3"]
["11730174_at",-0.078894615,0.015739202,0.047415733,-0.01573944,-0.086313725,0.047415733,0.9412195,0.82250714,1.0090278,0.012965978,1.0090278,"up","C4orf3",401152.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr4:120217574-120222256 (-) // 56.88 // q26"]
["11715132_x_at",-0.14924574,-0.11385679,-0.021077156,0.053261757,0.042963028,0.021077156,0.28817067,0.027310137,-1.0972005,-0.1338272,1.0972005,"down","HIST1H2BH",8345.0,"0006334 // nucleosome assembly // non-traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation","0000786 // nucleosome // non-traceable author statement /// 0000786 // nucleosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation","chr6:26251878-26252303 (+) // 100.0 // p22.2"]
["11736997_a_at",0.05065584,-0.0086398125,-0.041817665,-0.06297588,0.15185165,0.0086398125,0.87550586,0.6614082,-1.0227398,-0.032439105,1.0227398,"down","MOSPD3",64598.0,"0007507 // heart development // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005198 // structural molecule activity // inferred from electronic annotation","chr7:100209724-100212998 (+) // 95.52 // q22.1"]
["11721214_a_at",-0.012127876,-0.04785824,0.012127876,0.113996506,0.10469055,-0.016648293,0.52019334,0.14141321,-1.0594379,-0.08329898,1.0594379,"down","TMEM106B",54664.0,"","0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031902 // late endosome membrane // inferred from electronic annotation","","chr7:12250847-12276890 (+) // 91.68 // p21.3"]
["11739333_at",-0.03401208,0.028205633,-0.021666527,-0.034805298,0.021666527,0.09675026,0.7605416,0.4336419,-1.0259981,-0.03702808,1.0259981,"down","SSTR2",6752.0,"0006937 // regulation of muscle contraction // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007187 // G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger // traceable author statement /// 0007193 // adenylate cyclase-inhibiting G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007218 // neuropeptide signaling pathway // inferred from electronic annotation /// 0007267 // cell-cell signaling // traceable author statement /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0007584 // response to nutrient // traceable author statement /// 0007586 // digestion // traceable author statement /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0021549 // cerebellum development // inferred from electronic annotation /// 0030432 // peristalsis // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation /// 0038170 // somatostatin signaling pathway // traceable author statement /// 0038170 // somatostatin signaling pathway // inferred from electronic annotation /// 0042594 // response to starvation // inferred from electronic annotation /// 0071385 // cellular response to glucocorticoid stimulus // inferred from electronic annotation /// 0071392 // cellular response to estradiol stimulus // inferred from electronic annotation","0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004994 // somatostatin receptor activity // inferred from electronic annotation /// 0004994 // somatostatin receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0030165 // PDZ domain binding // inferred from physical interaction /// 0030165 // PDZ domain binding // inferred from electronic annotation","chr17:71161115-71168060 (+) // 82.39 // q25.1"]
["11741018_a_at",-0.023592949,-0.050304413,0.04335165,0.023592949,-0.025903702,0.050305367,0.8002829,0.5039893,-1.0183123,-0.02618013,1.0183123,"down","FAM65A",79567.0,"","0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation","","chr16:67562716-67580688 (+) // 98.59 // q22.1"]
["11743968_a_at",-0.0052261353,-0.009390831,-0.032455444,0.022683144,0.0052251816,0.03462982,0.32829314,0.038463976,-1.0256488,-0.036536857,1.0256488,"down","CYBA",1535.0,"0001938 // positive regulation of endothelial cell proliferation // inferred from electronic annotation /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0003106 // negative regulation of glomerular filtration by angiotensin // inferred from electronic annotation /// 0006801 // superoxide metabolic process // inferred from mutant phenotype /// 0006801 // superoxide metabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from mutant phenotype /// 0008217 // regulation of blood pressure // inferred from electronic annotation /// 0014895 // smooth muscle hypertrophy // inferred from sequence or structural similarity /// 0014895 // smooth muscle hypertrophy // inferred from electronic annotation /// 0017004 // cytochrome complex assembly // inferred from direct assay /// 0022900 // electron transport chain // inferred from electronic annotation /// 0030307 // positive regulation of cell growth // inferred from electronic annotation /// 0031667 // response to nutrient levels // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042554 // superoxide anion generation // inferred from mutant phenotype /// 0042554 // superoxide anion generation // inferred from electronic annotation /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0045087 // innate immune response // inferred from mutant phenotype /// 0045730 // respiratory burst // inferred from mutant phenotype /// 0050665 // hydrogen peroxide biosynthetic process // inferred from sequence or structural similarity /// 0050665 // hydrogen peroxide biosynthetic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from mutant phenotype /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0070555 // response to interleukin-1 // inferred from electronic annotation /// 0071230 // cellular response to amino acid stimulus // inferred from electronic annotation /// 0071260 // cellular response to mechanical stimulus // inferred from electronic annotation /// 0071310 // cellular response to organic substance // inferred from electronic annotation /// 0071333 // cellular response to glucose stimulus // inferred from electronic annotation /// 0071356 // cellular response to tumor necrosis factor // inferred from electronic annotation /// 0071407 // cellular response to organic cyclic compound // inferred from electronic annotation /// 0071480 // cellular response to gamma radiation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0030141 // secretory granule // traceable author statement /// 0030425 // dendrite // inferred from electronic annotation /// 0030670 // phagocytic vesicle membrane // traceable author statement /// 0043020 // NADPH oxidase complex // inferred from direct assay /// 0043020 // NADPH oxidase complex // inferred from mutant phenotype /// 0043020 // NADPH oxidase complex // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0097038 // perinuclear endoplasmic reticulum // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0009055 // electron carrier activity // inferred from direct assay /// 0009055 // electron carrier activity // traceable author statement /// 0016175 // superoxide-generating NADPH oxidase activity // inferred from mutant phenotype /// 0016175 // superoxide-generating NADPH oxidase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from physical interaction /// 0020037 // heme binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from physical interaction","chr16:88709696-88717560 (-) // 63.95 // q24.3"]
["11736749_a_at",0.08554554,-0.049661398,-0.19161987,0.17244482,-0.055715084,0.04966116,0.7130669,0.35886842,-1.0772668,-0.107375614,1.0772668,"down","SLC22A9",114571.0,"0006810 // transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr11:63137154-63177710 (+) // 86.42 // q12.3"]
["11746592_s_at",0.029661655,-0.029661655,-0.06607628,0.16405725,-0.22502708,0.08034468,0.94255865,0.826139,-1.0199395,-0.028483637,1.0199395,"down","LOC100288332 /// LOC100506193 /// LOC642778 /// LOC642799 /// NPIP /// NPIPL3 /// PKD1P1","100288332 /// 100506193 /// 23117 /// 339044 /// 642778 /// 642799 /// 9284","0001502 // cartilage condensation // inferred from electronic annotation /// 0001568 // blood vessel development // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from sequence or structural similarity /// 0001822 // kidney development // inferred from electronic annotation /// 0001822 // kidney development // inferred from sequence or structural similarity /// 0001892 // embryonic placenta development // inferred from electronic annotation /// 0001892 // embryonic placenta development // inferred from sequence or structural similarity /// 0006611 // protein export from nucleus // inferred from electronic annotation /// 0006611 // protein export from nucleus // inferred from sequence or structural similarity /// 0006810 // transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from sequence or structural similarity /// 0007156 // homophilic cell adhesion // traceable author statement /// 0007160 // cell-matrix adhesion // traceable author statement /// 0007161 // calcium-independent cell-matrix adhesion // traceable author statement /// 0007218 // neuropeptide signaling pathway // inferred from electronic annotation /// 0007259 // JAK-STAT cascade // inferred from electronic annotation /// 0007259 // JAK-STAT cascade // inferred from sequence or structural similarity /// 0007507 // heart development // inferred from electronic annotation /// 0007507 // heart development // inferred from expression pattern /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016337 // cell-cell adhesion // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from sequence or structural similarity /// 0021510 // spinal cord development // inferred from expression pattern /// 0021915 // neural tube development // inferred from expression pattern /// 0031659 // positive regulation of cyclin-dependent protein kinase activity involved in G1/S // inferred from direct assay /// 0032092 // positive regulation of protein binding // inferred from electronic annotation /// 0032092 // positive regulation of protein binding // inferred from sequence or structural similarity /// 0042994 // cytoplasmic sequestering of transcription factor // inferred from electronic annotation /// 0042994 // cytoplasmic sequestering of transcription factor // inferred from sequence or structural similarity /// 0043588 // skin development // inferred from expression pattern /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0048565 // digestive tract development // inferred from expression pattern /// 0048754 // branching morphogenesis of a tube // inferred from direct assay /// 0048806 // genitalia development // inferred from expression pattern /// 0050982 // detection of mechanical stimulus // inferred from electronic annotation /// 0050982 // detection of mechanical stimulus // inferred from sequence or structural similarity /// 0051028 // mRNA transport // inferred from electronic annotation /// 0051216 // cartilage development // inferred from expression pattern /// 0060428 // lung epithelium development // inferred from expression pattern /// 0060674 // placenta blood vessel development // inferred from electronic annotation /// 0060674 // placenta blood vessel development // inferred from sequence or structural similarity /// 0072164 // mesonephric tubule development // inferred from expression pattern /// 0072177 // mesonephric duct development // inferred from expression pattern /// 0072205 // metanephric collecting duct development // inferred from expression pattern /// 0072218 // metanephric ascending thin limb development // inferred from expression pattern /// 0072237 // metanephric proximal tubule development // inferred from expression pattern /// 0072287 // metanephric distal tubule morphogenesis // inferred from expression pattern","0002133 // polycystin complex // inferred from electronic annotation /// 0002133 // polycystin complex // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005643 // nuclear pore // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0005929 // cilium // inferred from electronic annotation /// 0005929 // cilium // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016323 // basolateral plasma membrane // inferred from direct assay /// 0031512 // motile primary cilium // inferred from electronic annotation /// 0031512 // motile primary cilium // inferred from sequence or structural similarity /// 0031965 // nuclear membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005261 // cation channel activity // inferred from electronic annotation /// 0005261 // cation channel activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0030246 // carbohydrate binding // inferred from electronic annotation /// 0044325 // ion channel binding // inferred from physical interaction","chr16:70011367-70023987 (-) // 99.26 // q22.1"]
["11729410_a_at",0.016131878,0.11161804,0.07477665,-0.016131878,-0.03724289,-0.054442406,0.2830526,0.02590136,1.074338,0.1034479,1.074338,"up","ZNF415",55786.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:53611132-53636145 (-) // 91.41 // q13.42"]
["11721848_at",-0.0068120956,0.0068120956,0.17070436,-0.12111616,0.10043812,-0.13152933,0.6853436,0.31935215,1.0774622,0.10763725,1.0774622,"up","REEP2",51308.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation","chr5:137774732-137782658 (+) // 92.04 // q31.2"]
["11761778_a_at",-0.07405329,0.1206646,-0.19421959,-0.060528755,0.29221153,0.060528755,0.70676965,0.3488705,-1.1069627,-0.14660658,1.1069627,"down","WDR45",11152.0,"0000045 // autophagic vacuole assembly // not recorded","0005737 // cytoplasm // not recorded","0005083 // small GTPase regulator activity // inferred from electronic annotation /// 0032266 // phosphatidylinositol-3-phosphate binding // not recorded /// 0080025 // phosphatidylinositol-3,5-bisphosphate binding // not recorded","chrX:48934732-48937553 (-) // 74.25 // p11.23"]
["11731939_a_at",0.0071606636,-0.2061739,0.1766038,-0.0071606636,0.32522106,-0.18042326,0.9285154,0.7875319,-1.0376709,-0.05334889,1.0376709,"down","UCP3",7352.0,"0000303 // response to superoxide // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0006629 // lipid metabolic process // traceable author statement /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006839 // mitochondrial transport // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0007584 // response to nutrient // inferred from electronic annotation /// 0007585 // respiratory gaseous exchange // traceable author statement /// 0009409 // response to cold // inferred from electronic annotation /// 0014823 // response to activity // inferred from electronic annotation /// 0015992 // proton transport // traceable author statement /// 0015992 // proton transport // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0032868 // response to insulin stimulus // inferred from electronic annotation /// 0032870 // cellular response to hormone stimulus // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0048545 // response to steroid hormone stimulus // inferred from electronic annotation /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation","0005739 // mitochondrion // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation","0005215 // transporter activity // traceable author statement /// 0017077 // oxidative phosphorylation uncoupler activity // inferred from electronic annotation","chr11:73711326-73720563 (-) // 92.25 // q13.4"]
["11743553_a_at",0.016748428,-0.036848545,0.070634365,0.046117306,-0.016747952,-0.052942753,0.8435621,0.5916635,1.01727,0.024702601,1.01727,"up","KIN",22944.0,"0006260 // DNA replication // inferred from direct assay /// 0006260 // DNA replication // inferred from electronic annotation /// 0006281 // DNA repair // inferred from electronic annotation /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006397 // mRNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from expression pattern /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016363 // nuclear matrix // inferred from direct assay","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from sequence or structural similarity /// 0003690 // double-stranded DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr10:7797191-7829935 (-) // 76.66 // p14"]
["11758285_s_at",0.050828934,0.017930984,-0.009615898,0.009615898,-0.01424408,-0.013972282,0.62986463,0.2479801,1.018125,0.025914779,1.018125,"up","GTF3C1",2975.0,"0006351 // transcription, DNA-dependent // inferred by curator /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006383 // transcription from RNA polymerase III promoter // inferred by curator /// 0006383 // transcription from RNA polymerase III promoter // traceable author statement /// 0009303 // rRNA transcription // traceable author statement /// 0009304 // tRNA transcription // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0042791 // 5S class rRNA transcription from RNA polymerase III type 1 promoter // inferred by curator /// 0042797 // tRNA transcription from RNA polymerase III promoter // inferred by curator","0000127 // transcription factor TFIIIC complex // inferred from direct assay /// 0000127 // transcription factor TFIIIC complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003677 // DNA binding // inferred by curator /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr16:27471776-27472301 (-) // 89.74 // p12.1"]
["11757037_s_at",-0.026103973,-0.030506134,-0.011156082,0.048218727,0.05675316,0.011156082,0.23590471,0.015597539,-1.0434041,-0.06129801,1.0434041,"down","H3F3A /// H3F3B","3020 /// 3021","0006334 // nucleosome assembly // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement","0000786 // nucleosome // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation","chr17:73774152-73775853 (-) // 99.82 // q25.1"]
["11724973_a_at",0.04579854,0.003757,-0.12491703,-0.003757,-0.06272912,0.11795759,0.8466804,0.5980664,-1.0297382,-0.04227758,1.0297382,"down","MYRIP",25924.0,"0006886 // intracellular protein transport // inferred from electronic annotation /// 0032024 // positive regulation of insulin secretion // inferred from sequence or structural similarity","0001750 // photoreceptor outer segment // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0030133 // transport vesicle // inferred from electronic annotation /// 0031045 // dense core granule // inferred from sequence or structural similarity /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // non-traceable author statement /// 0017022 // myosin binding // inferred from electronic annotation /// 0017137 // Rab GTPase binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:39850913-40301812 (+) // 93.45 // p22.1"]
["11730180_s_at",-0.10608482,-0.024496555,-0.074184895,0.026112556,0.09474182,0.024496078,0.27748367,0.024457255,-1.0842562,-0.116705656,1.0842562,"down","KDSR",2531.0,"0006665 // sphingolipid metabolic process // traceable author statement /// 0006665 // sphingolipid metabolic process // inferred from electronic annotation /// 0006666 // 3-keto-sphinganine metabolic process // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation /// 0030148 // sphingolipid biosynthetic process // traceable author statement /// 0030148 // sphingolipid biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005615 // extracellular space // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0047560 // 3-dehydrosphinganine reductase activity // inferred from direct assay /// 0047560 // 3-dehydrosphinganine reductase activity // inferred from electronic annotation","chr18:60994807-61034516 (-) // 81.73 // q21.33"]
["11724053_a_at",1.9073486E-4,0.015912056,0.053560257,-0.17965078,-1.912117E-4,-0.03989172,0.5473736,0.16398333,1.0691509,0.09646552,1.0691509,"up","FGFRL1",53834.0,"0001501 // skeletal system development // inferred from electronic annotation /// 0001558 // regulation of cell growth // non-traceable author statement /// 0003179 // heart valve morphogenesis // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from direct assay /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from electronic annotation /// 0060412 // ventricular septum morphogenesis // inferred from electronic annotation /// 0060539 // diaphragm development // inferred from electronic annotation","0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005007 // fibroblast growth factor-activated receptor activity // inferred from direct assay /// 0005007 // fibroblast growth factor-activated receptor activity // inferred from electronic annotation /// 0008201 // heparin binding // inferred from direct assay /// 0017134 // fibroblast growth factor binding // inferred from electronic annotation","chr4:1006240-1020686 (+) // 75.49 // p16.3"]
["11741696_x_at",-0.09745884,0.039509773,0.053322792,-0.03840828,-0.10597515,0.03840828,0.8583216,0.6238579,1.0236928,0.033782907,1.0236928,"up","NSUN5P1",155400.0,"","","","chr7:75039645-75046065 (+) // 100.0 // q11.23 /// chr7:72418837-72425261 (-) // 98.71 // q11.23 /// chr7:72717226-72722792 (-) // 96.34 // q11.23"]
["11751535_s_at",0.092883825,-0.012765169,-0.050206423,-0.050206423,0.09510374,0.012765169,0.9626583,0.8850294,-1.0064323,-0.009250122,1.0064323,"down","CA3",761.0,"0006730 // one-carbon metabolic process // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0004089 // carbonate dehydratase activity // inferred from electronic annotation /// 0004089 // carbonate dehydratase activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016151 // nickel cation binding // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:86351086-86360746 (+) // 99.91 // q21.2"]
["11716209_a_at",-0.013244629,0.035787582,-0.012131691,0.1001873,-0.03245926,0.012131691,0.8531754,0.6123964,-1.0161754,-0.023149429,1.0161754,"down","VPS28",51160.0,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016032 // viral reproduction // traceable author statement /// 0016044 // cellular membrane organization // traceable author statement /// 0016197 // endosomal transport // traceable author statement /// 0031397 // negative regulation of protein ubiquitination // inferred from direct assay /// 0046788 // egress of virus within host cell // traceable author statement","0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0010008 // endosome membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0031902 // late endosome membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr8:145649000-145653895 (-) // 69.48 // q24.3"]
["11734043_at",-0.045442343,0.15736389,0.045442343,-0.09970212,0.07417917,-0.09110546,0.6896068,0.3251532,1.0653524,0.09133078,1.0653524,"up","KIAA0408 /// SOGA3","387104 /// 9729","","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr6:127761734-127840792 (-) // 96.66 // q22.33"]
["11762934_at",0.027315855,-0.2635436,-0.02268076,0.0377779,0.022680521,-0.042487144,0.72457266,0.37765664,-1.0660634,-0.09229324,1.0660634,"down","CD300LG",146894.0,"","0005768 // endosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0032585 // multivesicular body membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation","chr17:41924523-41935518 (+) // 75.83 // q21.31"]
["11737888_a_at",-0.019909382,0.086782694,-0.104037285,0.2209866,-0.037353516,0.019909382,0.76962423,0.44957888,-1.0571905,-0.080235414,1.0571905,"down","HRH4",59340.0,"0006954 // inflammatory response // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation","0005624 // membrane fraction // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004969 // histamine receptor activity // non-traceable author statement /// 0004969 // histamine receptor activity // inferred from electronic annotation","chr18:22040592-22059920 (+) // 59.72 // q11.2"]
["11718294_s_at",0.018198013,0.0034208298,0.09806538,-0.0034208298,-0.049456596,-0.009492874,0.51503193,0.13752954,1.0429608,0.060684882,1.0429608,"up","NME1-NME2 /// NME2","4831 /// 654364","0002762 // negative regulation of myeloid leukocyte differentiation // inferred from electronic annotation /// 0006165 // nucleoside diphosphate phosphorylation // inferred from direct assay /// 0006165 // nucleoside diphosphate phosphorylation // inferred from electronic annotation /// 0006183 // GTP biosynthetic process // inferred from electronic annotation /// 0006228 // UTP biosynthetic process // inferred from electronic annotation /// 0006241 // CTP biosynthetic process // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006897 // endocytosis // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0007595 // lactation // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0009117 // nucleotide metabolic process // inferred from electronic annotation /// 0009142 // nucleoside triphosphate biosynthetic process // inferred from direct assay /// 0015949 // nucleobase-containing small molecule interconversion // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030879 // mammary gland development // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043388 // positive regulation of DNA binding // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement /// 0045618 // positive regulation of keratinocyte differentiation // inferred from mutant phenotype /// 0045682 // regulation of epidermis development // inferred from mutant phenotype /// 0050679 // positive regulation of epithelial cell proliferation // inferred from mutant phenotype /// 0051591 // response to cAMP // inferred from electronic annotation /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement","0001726 // ruffle // inferred from direct assay /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005813 // centrosome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005882 // intermediate filament // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0004536 // deoxyribonuclease activity // inferred from direct assay /// 0004550 // nucleoside diphosphate kinase activity // inferred from electronic annotation /// 0004550 // nucleoside diphosphate kinase activity // inferred from direct assay /// 0004673 // protein histidine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005524 // ATP binding // non-traceable author statement /// 0005524 // ATP binding // inferred from direct assay /// 0005525 // GTP binding // inferred from direct assay /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0043015 // gamma-tubulin binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:49230925-49249104 (+) // 72.48 // q21.33"]
["11743861_a_at",0.062934875,-0.005505562,0.086756706,-0.018491745,-0.02217865,0.005505562,0.47241238,0.108115375,1.0423094,0.059783597,1.0423094,"up","NIPSNAP3A",25934.0,"","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr9:107509870-107522400 (+) // 96.54 // q31.1"]
["11715832_s_at",0.011742592,-0.011742592,0.07431221,-0.04685211,0.07791138,-0.06429005,0.81190675,0.52562314,1.025159,0.035847686,1.025159,"up","SURF4",6836.0,"0007030 // Golgi organization // inferred from mutant phenotype /// 0010638 // positive regulation of organelle organization // inferred from mutant phenotype /// 0032527 // protein exit from endoplasmic reticulum // inferred from mutant phenotype /// 0034498 // early endosome to Golgi transport // inferred from mutant phenotype","0000139 // Golgi membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0033116 // endoplasmic reticulum-Golgi intermediate compartment membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr9:136228335-136243000 (-) // 95.94 // q34.2"]
["11730835_a_at",0.0013437271,-0.02903366,4.6348572E-4,-0.037504196,0.029260635,-4.6348572E-4,0.9295471,0.7905318,-1.0042881,-0.006173162,1.0042881,"down","MTX2",10651.0,"0006626 // protein targeting to mitochondrion // inferred from electronic annotation /// 0006626 // protein targeting to mitochondrion // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006839 // mitochondrial transport // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement","0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","","chr2:177134143-177202751 (+) // 97.76 // q31.1"]
["11723092_at",0.014196396,-0.014196396,0.08287907,-0.10133219,-0.1293788,0.14660692,0.8370326,0.57903576,1.0393353,0.05566109,1.0393353,"up","FNIP2",57600.0,"0001932 // regulation of protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0008630 // DNA damage response, signal transduction resulting in induction of apoptosis // inferred from sequence or structural similarity","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr4:159690165-159828201 (+) // 97.59 // q32.1"]
["11725177_at",-0.050572395,-0.15354252,0.026398659,-0.026398659,0.101168156,0.029074192,0.6031807,0.21571387,-1.0672169,-0.09385338,1.0672169,"down","KCTD11",147040.0,"0007049 // cell cycle // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0040008 // regulation of growth // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0051260 // protein homooligomerization // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","","chr17:7255207-7258263 (+) // 94.51 // p13.1"]
["11762768_at",-0.017149925,-0.0012128353,-0.015321255,0.0012128353,0.047867537,0.032348633,0.38118386,0.0584337,-1.0269536,-0.038370967,1.0269536,"down","ZNF215",7762.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016032 // viral reproduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0008270 // zinc ion binding // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:6953416-6977013 (+) // 62.35 // p15.4"]
["11743965_s_at",0.006020546,0.039580345,0.07574892,-0.047350883,-0.006020546,-0.09253454,0.3601158,0.049998462,1.0636955,0.08908528,1.0636955,"up","CERCAM /// LOC100506065","100506065 /// 51148","0006928 // cellular component movement // traceable author statement /// 0007155 // cell adhesion // inferred from direct assay /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007159 // leukocyte cell-cell adhesion // traceable author statement /// 0009103 // lipopolysaccharide biosynthetic process // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // inferred from electronic annotation /// 0005886 // plasma membrane // non-traceable author statement","","chr9:131182759-131199628 (+) // 92.03 // q34.11"]
["11741324_s_at",0.031518698,-0.2030406,0.014725924,0.039723158,-0.014725924,-0.27871752,0.9359113,0.8073085,1.0226469,0.0323081,1.0226469,"up","TRIM51 /// TRIM51EP /// TRIM51GP /// TRIM51HP","120824 /// 399940 /// 440041 /// 84767","","0005622 // intracellular // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:55650772-55659282 (+) // 98.6 // q11 /// chr11:89586007-89596233 (+) // 95.63 // q14.3 /// chr11:89714612-89724840 (-) // 95.51 // q14.3 /// chr11:55059364-55067885 (-) // 95.33 // q11"]
["11735795_at",-0.015116215,0.015116692,-0.1287775,0.08169699,0.06180334,-0.19682884,0.93789184,0.8135213,-1.0175852,-0.025149534,1.0175852,"down","GPSM1",26086.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0008277 // regulation of G-protein coupled receptor protein signaling pathway // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0001965 // G-protein alpha-subunit binding // inferred from electronic annotation /// 0005092 // GDP-dissociation inhibitor activity // inferred from electronic annotation /// 0030695 // GTPase regulator activity // inferred from electronic annotation","chr9:139221931-139236801 (+) // 86.97 // q34.3"]
["11741004_a_at",0.040816784,0.090168476,-0.16663599,-0.048150063,0.23376465,-0.040817022,0.8688079,0.6468962,-1.0425737,-0.060149357,1.0425737,"down","ALS2CR8",79800.0,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation","0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation","chr2:203776940-203851060 (+) // 91.59 // q33.2"]
["11763798_a_at",0.0,0.0,-0.06334233,0.14546323,0.0,-0.07052946,0.813545,0.5293295,-1.0324644,-0.046092015,1.0324644,"down","STMN4",81551.0,"0035556 // intracellular signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030426 // growth cone // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","","chr8:27096856-27115921 (-) // 99.84 // p21.2"]
["11731992_x_at",0.044504166,0.085972786,0.15205383,-0.05027008,-0.044504166,-0.08443737,0.20005402,0.010288062,1.1125839,0.1539141,1.1125839,"up","TROAP",10024.0,"0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement","0005515 // protein binding // inferred from physical interaction","chr12:49716970-49718160 (+) // 76.39 // q13.12"]
["11732719_at",-0.09041309,-0.03828144,0.03397274,0.00683403,0.09484482,-0.00683403,0.6385881,0.25940418,-1.0447725,-0.063188836,1.0447725,"down","EREG",2069.0,"0001525 // angiogenesis // inferred from electronic annotation /// 0001550 // ovarian cumulus expansion // inferred from sequence or structural similarity /// 0001550 // ovarian cumulus expansion // inferred from electronic annotation /// 0001556 // oocyte maturation // inferred from sequence or structural similarity /// 0001556 // oocyte maturation // inferred from electronic annotation /// 0001819 // positive regulation of cytokine production // inferred from sequence or structural similarity /// 0001819 // positive regulation of cytokine production // inferred from electronic annotation /// 0007143 // female meiosis // inferred from sequence or structural similarity /// 0007143 // female meiosis // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // inferred from sequence or structural similarity /// 0007173 // epidermal growth factor receptor signaling pathway // inferred from electronic annotation /// 0007267 // cell-cell signaling // inferred from direct assay /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from sequence or structural similarity /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from sequence or structural similarity /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0009299 // mRNA transcription // inferred from direct assay /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0009887 // organ morphogenesis // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // inferred from direct assay /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030216 // keratinocyte differentiation // traceable author statement /// 0030728 // ovulation // inferred from sequence or structural similarity /// 0030728 // ovulation // inferred from electronic annotation /// 0042060 // wound healing // traceable author statement /// 0042108 // positive regulation of cytokine biosynthetic process // inferred from direct assay /// 0042327 // positive regulation of phosphorylation // inferred from direct assay /// 0042327 // positive regulation of phosphorylation // inferred from sequence or structural similarity /// 0042327 // positive regulation of phosphorylation // inferred from electronic annotation /// 0042700 // luteinizing hormone signaling pathway // inferred from sequence or structural similarity /// 0042700 // luteinizing hormone signaling pathway // inferred from electronic annotation /// 0043434 // response to peptide hormone stimulus // inferred from electronic annotation /// 0043616 // keratinocyte proliferation // inferred from direct assay /// 0045089 // positive regulation of innate immune response // inferred from sequence or structural similarity /// 0045089 // positive regulation of innate immune response // inferred from electronic annotation /// 0045410 // positive regulation of interleukin-6 biosynthetic process // inferred from sequence or structural similarity /// 0045410 // positive regulation of interleukin-6 biosynthetic process // inferred from electronic annotation /// 0045740 // positive regulation of DNA replication // inferred from direct assay /// 0045740 // positive regulation of DNA replication // inferred from sequence or structural similarity /// 0045740 // positive regulation of DNA replication // inferred from electronic annotation /// 0045741 // positive regulation of epidermal growth factor-activated receptor activity // inferred from sequence or structural similarity /// 0045741 // positive regulation of epidermal growth factor-activated receptor activity // inferred from electronic annotation /// 0045840 // positive regulation of mitosis // inferred from sequence or structural similarity /// 0045840 // positive regulation of mitosis // inferred from electronic annotation /// 0045860 // positive regulation of protein kinase activity // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0048146 // positive regulation of fibroblast proliferation // inferred from direct assay /// 0048160 // primary follicle stage // inferred from sequence or structural similarity /// 0048160 // primary follicle stage // inferred from electronic annotation /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from sequence or structural similarity /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from electronic annotation /// 0050680 // negative regulation of epithelial cell proliferation // traceable author statement /// 0051151 // negative regulation of smooth muscle cell differentiation // inferred from direct assay /// 0051781 // positive regulation of cell division // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005154 // epidermal growth factor receptor binding // inferred from sequence or structural similarity /// 0005154 // epidermal growth factor receptor binding // traceable author statement /// 0005154 // epidermal growth factor receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // inferred from electronic annotation","chr4:75230859-75254477 (+) // 83.41 // q13.3"]
["11740723_x_at",-0.10501814,-0.013520718,0.013520718,-0.14579725,0.14304876,0.04560566,0.85666376,0.62091863,-1.0347568,-0.0492917,1.0347568,"down","LGALS9B /// LGALS9C","284194 /// 654346","","","0030246 // carbohydrate binding // inferred from electronic annotation","chr17:18380101-18398173 (+) // 94.88 // p11.2 /// chr17:20352793-20370848 (-) // 95.06 // p11.2"]
["11751552_at",0.0716486,-0.07790136,0.0803709,-0.07196522,0.027700424,-0.027700901,0.7730874,0.45487678,1.0343286,0.048694566,1.0343286,"up","RNF223",401934.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:1007125-1009687 (-) // 95.1 // p36.33"]
["11734940_a_at",-0.25280976,0.1715517,-0.124661684,0.25729227,-0.013076544,0.013076305,0.7188526,0.36809143,-1.1129616,-0.15440388,1.1129616,"down","SLC16A9",220963.0,"0006810 // transport // inferred from electronic annotation /// 0046415 // urate metabolic process // inferred from mutant phenotype /// 0055085 // transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0015293 // symporter activity // inferred from electronic annotation","chr10:61410522-61469837 (-) // 91.24 // q21.2"]
["11755071_a_at",-0.0861218,0.034754753,0.21116853,-0.034754753,0.039985657,-0.13012385,0.7348442,0.39365146,1.0679901,0.094898224,1.0679901,"up","HMCN1",83872.0,"0007596 // blood coagulation // inferred from electronic annotation /// 0007601 // visual perception // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005604 // basement membrane // inferred from electronic annotation /// 0005938 // cell cortex // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0031012 // extracellular matrix // traceable author statement","0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation","chr1:186097341-186160079 (+) // 96.21 // q31.1"]
["11759789_x_at",-0.12631035,0.0,0.0,-0.005719185,0.18925881,0.036170483,0.5735341,0.18777235,-1.0832304,-0.1153401,1.0832304,"down","NLGN4Y",22829.0,"0007155 // cell adhesion // inferred from electronic annotation /// 0007416 // synapse assembly // not recorded","0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // not recorded /// 0009986 // cell surface // not recorded /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0045202 // synapse // not recorded /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0004091 // carboxylesterase activity // not recorded /// 0004872 // receptor activity // not recorded /// 0005515 // protein binding // inferred from physical interaction /// 0042043 // neurexin family protein binding // not recorded","chrY:16734097-16845419 (+) // 80.05 // q11.221"]
["11750395_a_at",0.073373795,-0.024342537,-0.016080856,0.021747112,-0.18123436,0.01608038,0.7826361,0.46978393,1.0415888,0.05878582,1.0415888,"up","GLI2",2736.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0001501 // skeletal system development // inferred from electronic annotation /// 0001501 // skeletal system development // inferred from sequence or structural similarity /// 0001649 // osteoblast differentiation // inferred from direct assay /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001822 // kidney development // inferred from electronic annotation /// 0001822 // kidney development // inferred from sequence or structural similarity /// 0002009 // morphogenesis of an epithelium // inferred from electronic annotation /// 0002076 // osteoblast development // inferred from electronic annotation /// 0002076 // osteoblast development // inferred from sequence or structural similarity /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007224 // smoothened signaling pathway // inferred from direct assay /// 0007224 // smoothened signaling pathway // inferred from electronic annotation /// 0007389 // pattern specification process // inferred from sequence or structural similarity /// 0007389 // pattern specification process // inferred from electronic annotation /// 0007411 // axon guidance // inferred from electronic annotation /// 0007411 // axon guidance // inferred from sequence or structural similarity /// 0007418 // ventral midline development // inferred from sequence or structural similarity /// 0007418 // ventral midline development // inferred from electronic annotation /// 0007442 // hindgut morphogenesis // inferred from electronic annotation /// 0007442 // hindgut morphogenesis // inferred from sequence or structural similarity /// 0007507 // heart development // inferred from electronic annotation /// 0007507 // heart development // inferred from sequence or structural similarity /// 0008283 // cell proliferation // inferred from direct assay /// 0008283 // cell proliferation // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008589 // regulation of smoothened signaling pathway // inferred from electronic annotation /// 0009913 // epidermal cell differentiation // inferred from direct assay /// 0009953 // dorsal/ventral pattern formation // inferred from electronic annotation /// 0009954 // proximal/distal pattern formation // inferred from sequence or structural similarity /// 0021508 // floor plate formation // inferred from electronic annotation /// 0021508 // floor plate formation // inferred from sequence or structural similarity /// 0021513 // spinal cord dorsal/ventral patterning // inferred from sequence or structural similarity /// 0021513 // spinal cord dorsal/ventral patterning // inferred from electronic annotation /// 0021517 // ventral spinal cord development // inferred from sequence or structural similarity /// 0021517 // ventral spinal cord development // inferred from electronic annotation /// 0021696 // cerebellar cortex morphogenesis // inferred from electronic annotation /// 0021696 // cerebellar cortex morphogenesis // inferred from sequence or structural similarity /// 0021775 // smoothened signaling pathway involved in ventral spinal cord interneuron specification // inferred from electronic annotation /// 0021775 // smoothened signaling pathway involved in ventral spinal cord interneuron specification // inferred from sequence or structural similarity /// 0021776 // smoothened signaling pathway involved in spinal cord motor neuron cell fate specification // inferred from electronic annotation /// 0021904 // dorsal/ventral neural tube patterning // inferred from electronic annotation /// 0021915 // neural tube development // inferred from electronic annotation /// 0021938 // smoothened signaling pathway involved in regulation of cerebellar granule cell precursor cell proliferation // inferred from electronic annotation /// 0021965 // spinal cord ventral commissure morphogenesis // inferred from electronic annotation /// 0021965 // spinal cord ventral commissure morphogenesis // inferred from sequence or structural similarity /// 0021983 // pituitary gland development // inferred from electronic annotation /// 0021983 // pituitary gland development // inferred from sequence or structural similarity /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0030324 // lung development // inferred from sequence or structural similarity /// 0030879 // mammary gland development // inferred from sequence or structural similarity /// 0030879 // mammary gland development // inferred from electronic annotation /// 0030902 // hindbrain development // inferred from sequence or structural similarity /// 0030902 // hindbrain development // inferred from electronic annotation /// 0032331 // negative regulation of chondrocyte differentiation // inferred from electronic annotation /// 0033089 // positive regulation of T cell differentiation in thymus // inferred from sequence or structural similarity /// 0035295 // tube development // inferred from sequence or structural similarity /// 0035295 // tube development // inferred from electronic annotation /// 0042475 // odontogenesis of dentin-containing tooth // inferred from electronic annotation /// 0042475 // odontogenesis of dentin-containing tooth // inferred from sequence or structural similarity /// 0042733 // embryonic digit morphogenesis // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from electronic annotation /// 0045740 // positive regulation of DNA replication // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048566 // embryonic digestive tract development // inferred from electronic annotation /// 0048566 // embryonic digestive tract development // inferred from sequence or structural similarity /// 0048589 // developmental growth // inferred from electronic annotation /// 0048589 // developmental growth // inferred from sequence or structural similarity /// 0048646 // anatomical structure formation involved in morphogenesis // inferred from electronic annotation /// 0048666 // neuron development // inferred from sequence or structural similarity /// 0048666 // neuron development // inferred from electronic annotation /// 0048754 // branching morphogenesis of a tube // inferred from electronic annotation /// 0048754 // branching morphogenesis of a tube // inferred from sequence or structural similarity /// 0048856 // anatomical structure development // inferred from electronic annotation /// 0060032 // notochord regression // inferred from electronic annotation /// 0060322 // head development // inferred from electronic annotation /// 0060513 // prostatic bud formation // inferred from electronic annotation /// 0060603 // mammary gland duct morphogenesis // inferred from electronic annotation /// 0060831 // smoothened signaling pathway involved in dorsal/ventral neural tube patterning // inferred from electronic annotation /// 0071407 // cellular response to organic cyclic compound // inferred from electronic annotation /// 0090103 // cochlea morphogenesis // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0031512 // motile primary cilium // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:121554871-121748562 (+) // 99.96 // q14.2"]
["11738202_x_at",0.03213787,0.0023946762,0.10642719,-0.07266235,-0.0023946762,-0.053788185,0.41464084,0.07391775,1.0643222,0.089935005,1.0643222,"up","DAXX",1616.0,"0000281 // cytokinesis after mitosis // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from sequence or structural similarity /// 0007257 // activation of JUN kinase activity // traceable author statement /// 0008625 // induction of apoptosis via death domain receptors // traceable author statement /// 0030521 // androgen receptor signaling pathway // inferred from direct assay /// 0031396 // regulation of protein ubiquitination // inferred from direct assay /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000792 // heterochromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from mutant phenotype /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005938 // cell cortex // inferred from electronic annotation /// 0016605 // PML body // inferred from direct assay /// 0016605 // PML body // inferred from electronic annotation /// 0016605 // PML body // traceable author statement /// 0043005 // neuron projection // inferred from electronic annotation /// 0044297 // cell body // inferred from electronic annotation","0002039 // p53 binding // inferred from physical interaction /// 0005057 // receptor signaling protein activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from direct assay /// 0019899 // enzyme binding // inferred from physical interaction /// 0031072 // heat shock protein binding // traceable author statement /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0047485 // protein N-terminus binding // inferred from physical interaction /// 0050681 // androgen receptor binding // inferred from physical interaction","chr6:33286335-33290793 (-) // 94.47 // p21.32"]
["11721048_s_at",0.0443964,-0.06571245,0.14907885,0.0041942596,-0.13637114,-0.004193783,0.6832436,0.31623566,1.0629284,0.08804447,1.0629284,"up","N6AMT2",221143.0,"0032259 // methylation // inferred from electronic annotation","","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr13:21302638-21348057 (-) // 88.65 // q12.11"]
["11725050_a_at",0.014722824,0.10084391,-0.030483246,-0.008586407,0.008586407,-0.159616,0.6579042,0.283327,1.0581664,0.08156649,1.0581664,"up","FAIM2",23017.0,"0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // non-traceable author statement /// 0007417 // central nervous system development // inferred from electronic annotation /// 0021549 // cerebellum development // inferred from sequence or structural similarity /// 0021549 // cerebellum development // inferred from electronic annotation /// 0021680 // cerebellar Purkinje cell layer development // inferred from sequence or structural similarity /// 0021680 // cerebellar Purkinje cell layer development // inferred from electronic annotation /// 0021681 // cerebellar granular layer development // inferred from sequence or structural similarity /// 0021681 // cerebellar granular layer development // inferred from electronic annotation /// 0021702 // cerebellar Purkinje cell differentiation // inferred from sequence or structural similarity /// 0021702 // cerebellar Purkinje cell differentiation // inferred from electronic annotation /// 0043523 // regulation of neuron apoptotic process // inferred from mutant phenotype /// 0043523 // regulation of neuron apoptotic process // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0045121 // membrane raft // inferred from direct assay /// 0045121 // membrane raft // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","","chr12:50260679-50298000 (-) // 94.11 // q13.12"]
["11754927_x_at",0.013194561,-0.25897193,0.05002427,-0.013194799,0.13893723,-0.12094641,0.8547906,0.61621284,-1.047427,-0.066849776,1.047427,"down","PRKACB",5567.0,"0005975 // carbohydrate metabolic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006094 // gluconeogenesis // traceable author statement /// 0006112 // energy reserve metabolic process // traceable author statement /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006629 // lipid metabolic process // traceable author statement /// 0006833 // water transport // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007188 // adenylate cyclase-modulating G-protein coupled receptor signaling pathway // traceable author statement /// 0007202 // activation of phospholipase C activity // traceable author statement /// 0007243 // intracellular protein kinase cascade // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0019433 // triglyceride catabolic process // traceable author statement /// 0034199 // activation of protein kinase A activity // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0050796 // regulation of insulin secretion // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0071377 // cellular response to glucagon stimulus // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005952 // cAMP-dependent protein kinase complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004691 // cAMP-dependent protein kinase activity // inferred from direct assay /// 0004691 // cAMP-dependent protein kinase activity // inferred from electronic annotation /// 0004691 // cAMP-dependent protein kinase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from direct assay","chr1:84630322-84670977 (+) // 93.82 // p31.1"]
["11733355_x_at",-0.07199526,-0.055770636,-0.019421816,0.05471897,0.019421577,0.13701057,0.31700915,0.035144087,-1.0863179,-0.11944635,1.0863179,"down","C5AR1",728.0,"0000187 // activation of MAPK activity // traceable author statement /// 0006935 // chemotaxis // traceable author statement /// 0006935 // chemotaxis // inferred from electronic annotation /// 0006955 // immune response // traceable author statement /// 0006968 // cellular defense response // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007202 // activation of phospholipase C activity // traceable author statement /// 0007204 // elevation of cytosolic calcium ion concentration // traceable author statement /// 0007606 // sensory perception of chemical stimulus // traceable author statement /// 0030593 // neutrophil chemotaxis // inferred from electronic annotation /// 0032494 // response to peptidoglycan // inferred from electronic annotation /// 0050830 // defense response to Gram-positive bacterium // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004942 // anaphylatoxin receptor activity // inferred from electronic annotation /// 0004944 // C5a anaphylatoxin receptor activity // inferred from electronic annotation /// 0004944 // C5a anaphylatoxin receptor activity // traceable author statement","chr19:47813074-47825323 (+) // 71.91 // q13.32"]
["11721523_s_at",-0.039173126,-0.13088322,0.0062589645,0.0032596588,0.020173073,-0.0032596588,0.59445274,0.20846462,-1.0434226,-0.061323557,1.0434226,"down","ZNF706",51123.0,"","0005622 // intracellular // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:102209271-102217960 (-) // 97.31 // q22.3"]
["11743114_at",-0.0016393661,0.004723549,0.048467636,-0.067923546,-0.06072426,0.0016393661,0.4467137,0.093253426,1.042119,0.059520066,1.042119,"up","DHX15",1665.0,"0006397 // mRNA processing // inferred from electronic annotation /// 0006397 // mRNA processing // traceable author statement /// 0008380 // RNA splicing // inferred by curator /// 0008380 // RNA splicing // inferred from electronic annotation","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005689 // U12-type spliceosomal complex // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003724 // RNA helicase activity // traceable author statement /// 0004386 // helicase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation","chr4:24529097-24586226 (-) // 96.31 // p15.2"]
["11722186_a_at",0.05802965,0.04373169,0.20465326,-0.1180172,-0.08141565,-0.043731213,0.29945996,0.030272942,1.1353939,0.18319283,1.1353939,"up","AKT1",207.0,"0000060 // protein import into nucleus, translocation // inferred from mutant phenotype /// 0001893 // maternal placenta development // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from direct assay /// 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0005977 // glycogen metabolic process // inferred from electronic annotation /// 0005978 // glycogen biosynthetic process // inferred from electronic annotation /// 0005979 // regulation of glycogen biosynthetic process // inferred from mutant phenotype /// 0006006 // glucose metabolic process // inferred from electronic annotation /// 0006412 // translation // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006464 // cellular protein modification process // traceable author statement /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006469 // negative regulation of protein kinase activity // inferred from mutant phenotype /// 0006469 // negative regulation of protein kinase activity // inferred from sequence or structural similarity /// 0006469 // negative regulation of protein kinase activity // inferred from electronic annotation /// 0006809 // nitric oxide biosynthetic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // traceable author statement /// 0006916 // anti-apoptosis // inferred from electronic annotation /// 0006924 // activation-induced cell death of T cells // inferred from mutant phenotype /// 0006954 // inflammatory response // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007281 // germ cell development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0008286 // insulin receptor signaling pathway // inferred from mutant phenotype /// 0008286 // insulin receptor signaling pathway // inferred from electronic annotation /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0008629 // induction of apoptosis by intracellular signals // traceable author statement /// 0008633 // activation of pro-apoptotic gene products // traceable author statement /// 0008637 // apoptotic mitochondrial changes // inferred from electronic annotation /// 0008643 // carbohydrate transport // inferred from electronic annotation /// 0009408 // response to heat // traceable author statement /// 0009725 // response to hormone stimulus // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0010748 // negative regulation of plasma membrane long-chain fatty acid transport // inferred from mutant phenotype /// 0010765 // positive regulation of sodium ion transport // inferred from electronic annotation /// 0010907 // positive regulation of glucose metabolic process // inferred from mutant phenotype /// 0010975 // regulation of neuron projection development // inferred from sequence or structural similarity /// 0010975 // regulation of neuron projection development // inferred from electronic annotation /// 0015758 // glucose transport // inferred from electronic annotation /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0016310 // phosphorylation // inferred from direct assay /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from direct assay /// 0018105 // peptidyl-serine phosphorylation // inferred from electronic annotation /// 0030030 // cell projection organization // inferred from electronic annotation /// 0030154 // cell differentiation // traceable author statement /// 0030163 // protein catabolic process // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0030307 // positive regulation of cell growth // inferred from direct assay /// 0030307 // positive regulation of cell growth // inferred from electronic annotation /// 0030334 // regulation of cell migration // inferred from mutant phenotype /// 0030334 // regulation of cell migration // traceable author statement /// 0030334 // regulation of cell migration // inferred from electronic annotation /// 0031018 // endocrine pancreas development // traceable author statement /// 0031295 // T cell costimulation // traceable author statement /// 0031659 // positive regulation of cyclin-dependent protein kinase activity involved in G1/S // inferred from direct assay /// 0031999 // negative regulation of fatty acid beta-oxidation // inferred from mutant phenotype /// 0032094 // response to food // inferred from electronic annotation /// 0032270 // positive regulation of cellular protein metabolic process // inferred from sequence or structural similarity /// 0032270 // positive regulation of cellular protein metabolic process // inferred from electronic annotation /// 0032436 // positive regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0032869 // cellular response to insulin stimulus // inferred from mutant phenotype /// 0032869 // cellular response to insulin stimulus // inferred from sequence or structural similarity /// 0032869 // cellular response to insulin stimulus // inferred from electronic annotation /// 0032880 // regulation of protein localization // inferred from electronic annotation /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from direct assay /// 0034405 // response to fluid shear stress // inferred from mutant phenotype /// 0035556 // intracellular signal transduction // inferred from direct assay /// 0042593 // glucose homeostasis // inferred from electronic annotation /// 0042640 // anagen // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // non-traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from sequence or structural similarity /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from electronic annotation /// 0043536 // positive regulation of blood vessel endothelial cell migration // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement /// 0045429 // positive regulation of nitric oxide biosynthetic process // inferred from mutant phenotype /// 0045600 // positive regulation of fat cell differentiation // inferred from mutant phenotype /// 0045725 // positive regulation of glycogen biosynthetic process // inferred from mutant phenotype /// 0045725 // positive regulation of glycogen biosynthetic process // non-traceable author statement /// 0045768 // positive regulation of anti-apoptosis // inferred from sequence or structural similarity /// 0045768 // positive regulation of anti-apoptosis // inferred from electronic annotation /// 0045792 // negative regulation of cell size // inferred from electronic annotation /// 0045884 // regulation of survival gene product expression // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046209 // nitric oxide metabolic process // traceable author statement /// 0046326 // positive regulation of glucose import // inferred from mutant phenotype /// 0046329 // negative regulation of JNK cascade // inferred from electronic annotation /// 0046777 // protein autophosphorylation // traceable author statement /// 0046889 // positive regulation of lipid biosynthetic process // inferred from mutant phenotype /// 0048009 // insulin-like growth factor receptor signaling pathway // inferred from mutant phenotype /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0050999 // regulation of nitric-oxide synthase activity // traceable author statement /// 0051000 // positive regulation of nitric-oxide synthase activity // inferred from mutant phenotype /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0051146 // striated muscle cell differentiation // inferred from electronic annotation /// 0060644 // mammary gland epithelial cell differentiation // traceable author statement /// 0060709 // glycogen cell differentiation involved in embryonic placenta development // inferred from electronic annotation /// 0060716 // labyrinthine layer blood vessel development // inferred from electronic annotation /// 0070141 // response to UV-A // inferred from direct assay /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation /// 0071364 // cellular response to epidermal growth factor stimulus // inferred from electronic annotation /// 0090004 // positive regulation of establishment of protein localization in plasma membrane // inferred from mutant phenotype /// 0090201 // negative regulation of release of cytochrome c from mitochondria // inferred from sequence or structural similarity /// 0090201 // negative regulation of release of cytochrome c from mitochondria // inferred from electronic annotation /// 2001047 // regulation of G1/S transition checkpoint // traceable author statement","0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005080 // protein kinase C binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred by curator /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0005547 // phosphatidylinositol-3,4,5-trisphosphate binding // inferred from direct assay /// 0016301 // kinase activity // inferred from direct assay /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from sequence or structural similarity /// 0019899 // enzyme binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0030235 // nitric-oxide synthase regulator activity // inferred from mutant phenotype /// 0042802 // identical protein binding // inferred from physical interaction /// 0043325 // phosphatidylinositol-3,4-bisphosphate binding // inferred from direct assay","chr14:105235685-105261441 (-) // 94.1 // q32.33"]
["11720622_a_at",0.00633049,-0.00633049,0.060972214,-0.07773399,0.053703308,-0.14756012,0.65719235,0.2826985,1.0552033,0.077521004,1.0552033,"up","CDK16",5127.0,"0006468 // protein phosphorylation // non-traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation","","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // non-traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004693 // cyclin-dependent protein kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chrX:47078075-47089396 (+) // 93.74 // p11.23"]
["11737847_a_at",-0.043061256,-0.1068902,-0.08370972,0.13668156,0.043061733,0.12020016,0.17152515,0.0066214576,-1.1312112,-0.17786826,1.1312112,"down","MR1",3140.0,"0002474 // antigen processing and presentation of peptide antigen via MHC class I // inferred from electronic annotation /// 0006955 // immune response // inferred from electronic annotation /// 0006955 // immune response // traceable author statement /// 0019882 // antigen processing and presentation // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0042612 // MHC class I protein complex // inferred from electronic annotation","0032393 // MHC class I receptor activity // traceable author statement","chr1:181003104-181024633 (+) // 99.92 // q25.3"]
["11738346_at",-0.0075216293,-0.12632751,-0.09843159,0.0075218678,0.026784897,0.06365013,0.35854292,0.04935644,-1.0792875,-0.11007926,1.0792875,"down","ZNF713",349075.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:55980330-56008433 (+) // 75.8 // p11.2"]
["11723580_at",0.006286621,-0.030855179,0.10025978,-0.029346466,0.018304825,-0.006286621,0.79516107,0.49524772,1.0217247,0.03100652,1.0217247,"up","C6orf228",221710.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation","chr6:11094033-11138971 (+) // 76.8 // p24.2"]
["11728834_x_at",-0.053739548,-0.045348644,-0.060909748,0.045968056,0.07632923,0.045348644,0.08459432,6.13178E-4,-1.0786409,-0.10921469,1.0786409,"down","C4orf32",132720.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr4:113066522-113110237 (+) // 91.55 // q25"]
["11735867_a_at",-0.037299156,0.037299156,0.39207888,-0.071249485,0.07760954,-0.26517248,0.6389835,0.26008308,1.162285,0.21696383,1.162285,"up","C5orf46",389336.0,"","0005576 // extracellular region // inferred from electronic annotation","","chr5:147272271-147286101 (-) // 87.39 // q32"]
["11763325_a_at",-0.024356365,0.07339859,-0.23409986,-0.0065197945,0.051463604,0.0065197945,0.7652014,0.441569,-1.0561688,-0.07884042,1.0561688,"down","FER",2241.0,"0000226 // microtubule cytoskeleton organization // inferred from mutant phenotype /// 0000278 // mitotic cell cycle // inferred from mutant phenotype /// 0001932 // regulation of protein phosphorylation // inferred from sequence or structural similarity /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006935 // chemotaxis // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from mutant phenotype /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0010591 // regulation of lamellipodium assembly // inferred from direct assay /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // inferred from mutant phenotype /// 0030335 // positive regulation of cell migration // inferred from mutant phenotype /// 0030838 // positive regulation of actin filament polymerization // inferred from mutant phenotype /// 0031532 // actin cytoskeleton reorganization // inferred from sequence or structural similarity /// 0032496 // response to lipopolysaccharide // inferred from sequence or structural similarity /// 0032869 // cellular response to insulin stimulus // inferred from sequence or structural similarity /// 0033007 // negative regulation of mast cell activation involved in immune response // inferred from sequence or structural similarity /// 0033007 // negative regulation of mast cell activation involved in immune response // inferred from electronic annotation /// 0034446 // substrate adhesion-dependent cell spreading // inferred from sequence or structural similarity /// 0034614 // cellular response to reactive oxygen species // inferred from sequence or structural similarity /// 0035426 // extracellular matrix-cell signaling // inferred from sequence or structural similarity /// 0035556 // intracellular signal transduction // traceable author statement /// 0036006 // cellular response to macrophage colony-stimulating factor stimulus // inferred from mutant phenotype /// 0036119 // response to platelet-derived growth factor stimulus // inferred from sequence or structural similarity /// 0038028 // insulin receptor signaling pathway via phosphatidylinositol 3-kinase cascade // inferred from sequence or structural similarity /// 0038095 // Fc-epsilon receptor signaling pathway // inferred from sequence or structural similarity /// 0038109 // Kit signaling pathway // inferred from sequence or structural similarity /// 0042058 // regulation of epidermal growth factor receptor signaling pathway // inferred from mutant phenotype /// 0042503 // tyrosine phosphorylation of Stat3 protein // inferred from direct assay /// 0044331 // cell-cell adhesion mediated by cadherin // inferred from sequence or structural similarity /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from electronic annotation /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from sequence or structural similarity /// 0048008 // platelet-derived growth factor receptor signaling pathway // traceable author statement /// 0050904 // diapedesis // inferred from sequence or structural similarity /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from mutant phenotype /// 0070102 // interleukin-6-mediated signaling pathway // inferred from mutant phenotype","0000790 // nuclear chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005938 // cell cortex // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from direct assay /// 0030054 // cell junction // inferred from direct assay /// 0030054 // cell junction // inferred from electronic annotation /// 0031234 // extrinsic to internal side of plasma membrane // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003779 // actin binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // traceable author statement /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004715 // non-membrane spanning protein tyrosine kinase activity // inferred from direct assay /// 0004715 // non-membrane spanning protein tyrosine kinase activity // inferred from electronic annotation /// 0005154 // epidermal growth factor receptor binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0008092 // cytoskeletal protein binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from direct assay /// 0008289 // lipid binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0017137 // Rab GTPase binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0045295 // gamma-catenin binding // inferred from electronic annotation /// 0045296 // cadherin binding // inferred from electronic annotation /// 0050839 // cell adhesion molecule binding // inferred from electronic annotation","chr5:108527194-108532539 (+) // 97.54 // q21.3"]
["11737234_s_at",-0.037755013,-0.17034483,0.20491505,-0.06939316,0.059322834,0.037755013,0.97984946,0.93406564,-1.0071578,-0.010289744,1.0071578,"down","USP6",9098.0,"0006464 // cellular protein modification process // non-traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0016579 // protein deubiquitination // inferred from direct assay /// 0032313 // regulation of Rab GTPase activity // inferred from electronic annotation /// 0032851 // positive regulation of Rab GTPase activity // inferred from electronic annotation /// 0060627 // regulation of vesicle-mediated transport // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005764 // lysosome // traceable author statement /// 0005768 // endosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0055037 // recycling endosome // inferred from direct assay","0003676 // nucleic acid binding // traceable author statement /// 0004197 // cysteine-type endopeptidase activity // traceable author statement /// 0004221 // ubiquitin thiolesterase activity // inferred from electronic annotation /// 0004843 // ubiquitin-specific protease activity // inferred from direct assay /// 0005097 // Rab GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr17:5031686-5078339 (+) // 97.26 // p13.2"]
["11756771_x_at",-0.1460743,-0.052964687,-0.040302277,0.1350894,0.087323666,0.040302753,0.2479208,0.01784809,-1.1229956,-0.16735229,1.1229956,"down","SPTY2D1",144108.0,"","","","chr11:18627948-18634012 (-) // 95.06 // p15.1"]
["11728637_a_at",0.0018835068,-0.0018835068,-0.018594742,0.03180027,-0.00730896,0.032881737,0.5430556,0.15877737,-1.0177072,-0.02532259,1.0177072,"down","ATP5A1",498.0,"0001937 // negative regulation of endothelial cell proliferation // inferred from mutant phenotype /// 0006172 // ADP biosynthetic process // inferred from electronic annotation /// 0006200 // ATP catabolic process // inferred from direct assay /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006629 // lipid metabolic process // inferred from sequence or structural similarity /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006754 // ATP biosynthetic process // inferred by curator /// 0006754 // ATP biosynthetic process // non-traceable author statement /// 0006754 // ATP biosynthetic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0009790 // embryo development // inferred from sequence or structural similarity /// 0009790 // embryo development // inferred from electronic annotation /// 0015986 // ATP synthesis coupled proton transport // inferred from electronic annotation /// 0015991 // ATP hydrolysis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0042776 // mitochondrial ATP synthesis coupled proton transport // inferred by curator /// 0042776 // mitochondrial ATP synthesis coupled proton transport // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046034 // ATP metabolic process // inferred from electronic annotation","0000275 // mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) // inferred from electronic annotation /// 0005739 // mitochondrion // inferred by curator /// 0005739 // mitochondrion // non-traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from direct assay /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005753 // mitochondrial proton-transporting ATP synthase complex // inferred from direct assay /// 0005759 // mitochondrial matrix // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0008180 // signalosome // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016469 // proton-transporting two-sector ATPase complex // inferred from electronic annotation /// 0033178 // proton-transporting two-sector ATPase complex, catalytic domain // inferred from electronic annotation /// 0045261 // proton-transporting ATP synthase complex, catalytic core F(1) // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from sequence or structural similarity /// 0005524 // ATP binding // inferred from electronic annotation /// 0016820 // hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from direct assay /// 0016887 // ATPase activity // inferred from electronic annotation /// 0022857 // transmembrane transporter activity // inferred by curator /// 0042288 // MHC class I protein binding // inferred from direct assay /// 0043499 // eukaryotic cell surface binding // inferred from direct assay /// 0043531 // ADP binding // inferred from electronic annotation /// 0046933 // hydrogen ion transporting ATP synthase activity, rotational mechanism // inferred from sequence or structural similarity /// 0046933 // hydrogen ion transporting ATP synthase activity, rotational mechanism // inferred from electronic annotation /// 0046961 // proton-transporting ATPase activity, rotational mechanism // inferred from electronic annotation","chr18:43664112-43678287 (-) // 93.66 // q21.1"]
["11722243_a_at",-0.2427063,-0.0071134567,-0.091538906,0.1598463,0.0071134567,0.038888454,0.4467984,0.09331119,-1.1347718,-0.18240224,1.1347718,"down","FBXO25",26260.0,"0016567 // protein ubiquitination // inferred from sequence or structural similarity /// 0016567 // protein ubiquitination // non-traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation","0000151 // ubiquitin ligase complex // non-traceable author statement /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0019005 // SCF ubiquitin ligase complex // inferred from sequence or structural similarity","0003779 // actin binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein ligase activity // non-traceable author statement","chr8:356807-419873 (+) // 95.1 // p23.3"]
["11743732_a_at",-0.029898643,-0.1279335,-0.079444885,0.054833412,0.04550457,0.029898643,0.22415964,0.013779723,-1.088623,-0.12250448,1.088623,"down","RCAN1",1827.0,"0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007417 // central nervous system development // traceable author statement /// 0007519 // skeletal muscle tissue development // inferred from electronic annotation /// 0008015 // blood circulation // traceable author statement /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0019722 // calcium-mediated signaling // inferred from electronic annotation /// 0043627 // response to estrogen stimulus // inferred from electronic annotation /// 0043666 // regulation of phosphoprotein phosphatase activity // inferred from electronic annotation /// 0048741 // skeletal muscle fiber development // inferred from electronic annotation /// 0051151 // negative regulation of smooth muscle cell differentiation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation","0003677 // DNA binding // traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr21:35888789-35987510 (-) // 95.78 // q22.12"]
["11724603_a_at",-0.069954395,0.13198948,-0.088424206,0.021916866,-0.02191639,0.111394405,0.84752625,0.5999773,-1.032347,-0.04592793,1.032347,"down","ZNF219",51222.0,"0006351 // transcription, DNA-dependent // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0004969 // histamine receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr14:21558236-21566808 (-) // 88.24 // q11.2"]
["11764222_at",0.1032033,-0.021574974,0.021574974,-0.055051327,-0.08076954,0.15051126,0.9080877,0.7366366,1.0206614,0.029504273,1.0206614,"up","","","","","","chr2:39011611-39012122 (-) // 83.98 // p22.1"]
["11722426_a_at",0.14978099,-0.1661694,-0.021821737,0.11101985,-0.13156128,0.021821499,0.9731759,0.91480887,-1.0091659,-0.013163338,1.0091659,"down","FGL2",10875.0,"0007165 // signal transduction // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005577 // fibrinogen complex // traceable author statement /// 0005615 // extracellular space // inferred from electronic annotation","0005102 // receptor binding // inferred from electronic annotation","chr7:76822675-76829201 (-) // 84.6 // q11.23"]
["11757396_s_at",-0.08487606,-0.14881516,-0.028113365,0.09637451,0.033215523,0.028113365,0.2885798,0.027426481,-1.1017798,-0.13983594,1.1017798,"down","ANXA8 /// ANXA8L1 /// ANXA8L2","244 /// 653145 /// 728113","0007596 // blood coagulation // inferred from electronic annotation /// 0007599 // hemostasis // inferred from electronic annotation","","0005509 // calcium ion binding // inferred from electronic annotation /// 0005544 // calcium-dependent phospholipid binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr10:47157982-47158897 (-) // 84.59 // q11.22"]
["11758071_s_at",-0.06761551,0.06761551,0.2141943,0.13897467,-0.17858791,-0.14283895,0.71620744,0.3641863,1.0959755,0.13221557,1.0959755,"up","SULF1",23213.0,"0001822 // kidney development // inferred from sequence or structural similarity /// 0001822 // kidney development // inferred from electronic annotation /// 0001937 // negative regulation of endothelial cell proliferation // inferred from direct assay /// 0002063 // chondrocyte development // inferred from sequence or structural similarity /// 0002063 // chondrocyte development // inferred from electronic annotation /// 0003094 // glomerular filtration // inferred from sequence or structural similarity /// 0003094 // glomerular filtration // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0010575 // positive regulation vascular endothelial growth factor production // inferred from sequence or structural similarity /// 0010575 // positive regulation vascular endothelial growth factor production // inferred from electronic annotation /// 0014846 // esophagus smooth muscle contraction // inferred from sequence or structural similarity /// 0014846 // esophagus smooth muscle contraction // inferred from electronic annotation /// 0016525 // negative regulation of angiogenesis // inferred from direct assay /// 0030177 // positive regulation of Wnt receptor signaling pathway // inferred from direct assay /// 0030201 // heparan sulfate proteoglycan metabolic process // inferred from direct assay /// 0030201 // heparan sulfate proteoglycan metabolic process // non-traceable author statement /// 0030201 // heparan sulfate proteoglycan metabolic process // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // inferred from mutant phenotype /// 0030513 // positive regulation of BMP signaling pathway // inferred from mutant phenotype /// 0032836 // glomerular basement membrane development // inferred from sequence or structural similarity /// 0032836 // glomerular basement membrane development // inferred from electronic annotation /// 0035860 // glial cell-derived neurotrophic factor receptor signaling pathway // inferred from sequence or structural similarity /// 0035860 // glial cell-derived neurotrophic factor receptor signaling pathway // inferred from electronic annotation /// 0040036 // regulation of fibroblast growth factor receptor signaling pathway // inferred from mutant phenotype /// 0040037 // negative regulation of fibroblast growth factor receptor signaling pathway // inferred from mutant phenotype /// 0040037 // negative regulation of fibroblast growth factor receptor signaling pathway // inferred from sequence or structural similarity /// 0040037 // negative regulation of fibroblast growth factor receptor signaling pathway // inferred from electronic annotation /// 0048010 // vascular endothelial growth factor receptor signaling pathway // inferred from direct assay /// 0048706 // embryonic skeletal system development // inferred from sequence or structural similarity /// 0048706 // embryonic skeletal system development // inferred from electronic annotation /// 0051216 // cartilage development // inferred from sequence or structural similarity /// 0051216 // cartilage development // inferred from electronic annotation /// 0060348 // bone development // inferred from sequence or structural similarity /// 0060348 // bone development // inferred from electronic annotation /// 0060384 // innervation // inferred from sequence or structural similarity /// 0060384 // innervation // inferred from electronic annotation /// 0060686 // negative regulation of prostatic bud formation // inferred from sequence or structural similarity /// 0060686 // negative regulation of prostatic bud formation // inferred from electronic annotation","0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // non-traceable author statement /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from sequence or structural similarity /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005795 // Golgi stack // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0009986 // cell surface // inferred from electronic annotation /// 0045121 // membrane raft // inferred from direct assay","0003824 // catalytic activity // inferred from electronic annotation /// 0004065 // arylsulfatase activity // inferred from direct assay /// 0004065 // arylsulfatase activity // inferred from mutant phenotype /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0008449 // N-acetylglucosamine-6-sulfatase activity // inferred from direct assay /// 0008449 // N-acetylglucosamine-6-sulfatase activity // inferred from mutant phenotype /// 0008449 // N-acetylglucosamine-6-sulfatase activity // inferred from electronic annotation /// 0008484 // sulfuric ester hydrolase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:70571572-70572292 (+) // 98.49 // q13.3"]
["11762015_at",-0.073336124,-0.26109886,0.055185795,0.020798922,-0.018024445,0.018024206,0.70088863,0.3412627,-1.0717853,-0.100015976,1.0717853,"down","EPB41L4A",64097.0,"","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0019898 // extrinsic to membrane // inferred from electronic annotation","0008092 // cytoskeletal protein binding // inferred from electronic annotation","chr5:111599122-111755010 (-) // 86.01 // q22.2"]
["11764105_at",0.045959473,-0.016104698,-0.12645078,0.12849164,0.016104698,-0.051381588,0.7605416,0.43360326,-1.0448315,-0.063270316,1.0448315,"down","","","","","","chr7:48122624-48123183 (-) // 57.22 // p12.3"]
["11727897_a_at",0.07621765,0.09397316,0.14962006,-0.14136028,-0.09668255,-0.07621765,0.11248124,0.0019595248,1.1577767,0.21135704,1.1577767,"up","NAA38",51691.0,"0000398 // nuclear mRNA splicing, via spliceosome // non-traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0017070 // U6 snRNA binding // non-traceable author statement","chr7:117824085-117833660 (+) // 83.17 // q31.31"]
["11732797_x_at",-0.059054375,-0.12888384,0.03276825,-0.03276825,0.09003782,0.09213114,0.5641008,0.1791601,-1.0729059,-0.10152355,1.0729059,"down","KIAA1841",84542.0,"","","","chr2:61293004-61351411 (+) // 89.75 // p16.1"]
["11761694_at",-0.012696743,0.012696743,-0.08248854,0.10078764,0.036054134,-0.11085653,0.8597586,0.62687,-1.0253794,-0.036157846,1.0253794,"down","LOC100289424",1.00289424E8,"","","","chr10:134777218-134778783 (-) // 76.68 // q26.3"]
["11745160_s_at",0.001987934,-0.105660915,0.009481907,0.0988698,-0.24133492,-0.001987934,0.9622385,0.88372386,1.0116807,0.01675406,1.0116807,"up","TGFA",7039.0,"0000165 // MAPK cascade // inferred from direct assay /// 0000187 // activation of MAPK activity // inferred from direct assay /// 0001525 // angiogenesis // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0042060 // wound healing // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0043526 // neuroprotection // inferred from electronic annotation /// 0045741 // positive regulation of epidermal growth factor-activated receptor activity // inferred from direct assay /// 0045840 // positive regulation of mitosis // inferred from direct assay /// 0048523 // negative regulation of cellular process // inferred from electronic annotation /// 0050679 // positive regulation of epithelial cell proliferation // inferred from direct assay /// 0051480 // cytosolic calcium ion homeostasis // inferred from electronic annotation /// 0051781 // positive regulation of cell division // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // non-traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0001948 // glycoprotein binding // inferred from electronic annotation /// 0004708 // MAP kinase kinase activity // inferred from direct assay /// 0005154 // epidermal growth factor receptor binding // inferred from direct assay /// 0005154 // epidermal growth factor receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // inferred from direct assay /// 0008083 // growth factor activity // inferred from electronic annotation","chr2:70676450-70780904 (-) // 100.0 // p13.3"]
["11737647_at",0.05009079,-0.062072277,-0.1307509,0.0022411346,0.0070815086,-0.0022411346,0.7380576,0.39759558,-1.0352204,-0.04993793,1.0352204,"down","EFCAB4B",84766.0,"0002115 // store-operated calcium entry // inferred from mutant phenotype /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0032237 // activation of store-operated calcium channel activity // inferred from mutant phenotype /// 0051928 // positive regulation of calcium ion transport // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay","0005509 // calcium ion binding // inferred from direct assay /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr12:3749553-3862366 (-) // 94.39 // p13.32"]
["11733277_a_at",-0.040226936,0.0302217,0.03337717,-0.0072393417,0.0072393417,-0.015743017,0.86022365,0.6288105,1.0090784,0.013038245,1.0090784,"up","SLC2A2",6514.0,"0005975 // carbohydrate metabolic process // traceable author statement /// 0006112 // energy reserve metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0008643 // carbohydrate transport // inferred from electronic annotation /// 0008645 // hexose transport // traceable author statement /// 0009749 // response to glucose stimulus // inferred from electronic annotation /// 0015755 // fructose transport // inferred from electronic annotation /// 0015758 // glucose transport // not recorded /// 0015758 // glucose transport // traceable author statement /// 0015758 // glucose transport // inferred from electronic annotation /// 0031018 // endocrine pancreas development // traceable author statement /// 0035428 // hexose transmembrane transport // traceable author statement /// 0043434 // response to peptide hormone stimulus // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0050796 // regulation of insulin secretion // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0070837 // dehydroascorbic acid transport // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0005903 // brush border // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0031526 // brush border membrane // inferred from electronic annotation","0005158 // insulin receptor binding // inferred from electronic annotation /// 0005215 // transporter activity // inferred from electronic annotation /// 0005355 // glucose transmembrane transporter activity // not recorded /// 0005355 // glucose transmembrane transporter activity // inferred from electronic annotation /// 0005355 // glucose transmembrane transporter activity // traceable author statement /// 0015149 // hexose transmembrane transporter activity // traceable author statement /// 0022857 // transmembrane transporter activity // inferred from electronic annotation /// 0022891 // substrate-specific transmembrane transporter activity // inferred from electronic annotation /// 0033300 // dehydroascorbic acid transporter activity // inferred from electronic annotation /// 0055056 // D-glucose transmembrane transporter activity // inferred from electronic annotation","chr3:170713801-170744768 (-) // 99.31 // q26.2"]
["11730952_a_at",0.21743631,0.075888634,0.09457111,-0.085458755,-0.2524042,-0.075888634,0.26339138,0.021093236,1.2034831,0.26721588,1.2034831,"up","PDK3",5165.0,"0000160 // two-component signal transduction system (phosphorelay) // inferred from electronic annotation /// 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006006 // glucose metabolic process // inferred from electronic annotation /// 0006006 // glucose metabolic process // traceable author statement /// 0006090 // pyruvate metabolic process // traceable author statement /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0010510 // regulation of acetyl-CoA biosynthetic process from pyruvate // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018106 // peptidyl-histidine phosphorylation // inferred from electronic annotation /// 0023014 // signal transduction by phosphorylation // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement","0005739 // mitochondrion // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement /// 0005759 // mitochondrial matrix // inferred from electronic annotation","0000155 // two-component sensor activity // inferred from electronic annotation /// 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from direct assay /// 0004672 // protein kinase activity // traceable author statement /// 0004673 // protein histidine kinase activity // inferred from electronic annotation /// 0004740 // pyruvate dehydrogenase (acetyl-transferring) kinase activity // inferred from electronic annotation /// 0004740 // pyruvate dehydrogenase (acetyl-transferring) kinase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chrX:24483343-24558207 (+) // 99.17 // p22.11"]
["11718170_a_at",0.001698494,0.04255581,-0.001698494,0.012075901,-0.053340435,-0.001698494,0.6770354,0.30872142,1.0199555,0.028506232,1.0199555,"up","MLL4",9757.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation /// 0048096 // chromatin-mediated maintenance of transcription // non-traceable author statement /// 0051568 // histone H3-K4 methylation // inferred from direct assay /// 0051568 // histone H3-K4 methylation // inferred from mutant phenotype /// 0051568 // histone H3-K4 methylation // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0035097 // histone methyltransferase complex // inferred from direct assay /// 0035097 // histone methyltransferase complex // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0018024 // histone-lysine N-methyltransferase activity // inferred from electronic annotation /// 0042800 // histone methyltransferase activity (H3-K4 specific) // inferred from direct assay /// 0042800 // histone methyltransferase activity (H3-K4 specific) // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:36208910-36229779 (+) // 94.07 // q13.12"]
["11731567_a_at",-0.09212303,-0.061976433,-0.010924339,0.010924339,0.059458733,0.054473877,0.28672338,0.026829025,-1.0692705,-0.096626855,1.0692705,"down","MDM2",4193.0,"0000075 // cell cycle checkpoint // traceable author statement /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006461 // protein complex assembly // inferred from direct assay /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // inferred from mutant phenotype /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0007089 // traversing start control point of mitotic cell cycle // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0016567 // protein ubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from mutant phenotype /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0018205 // peptidyl-lysine modification // inferred from mutant phenotype /// 0030163 // protein catabolic process // inferred from electronic annotation /// 0031648 // protein destabilization // inferred from direct assay /// 0032436 // positive regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0034504 // protein localization to nucleus // inferred from direct assay /// 0042176 // regulation of protein catabolic process // inferred from direct assay /// 0042787 // protein ubiquitination involved in ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0042787 // protein ubiquitination involved in ubiquitin-dependent protein catabolic process // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043518 // negative regulation of DNA damage response, signal transduction by p53 class mediator // inferred from direct assay /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045184 // establishment of protein localization // inferred from direct assay /// 0045787 // positive regulation of cell cycle // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045931 // positive regulation of mitotic cell cycle // inferred from mutant phenotype /// 0046677 // response to antibiotic // inferred from expression pattern /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0071157 // negative regulation of cell cycle arrest // inferred from direct assay /// 0071157 // negative regulation of cell cycle arrest // inferred from electronic annotation /// 0071456 // cellular response to hypoxia // inferred from expression pattern","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from mutant phenotype /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from mutant phenotype /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0016604 // nuclear body // inferred from direct assay /// 0030666 // endocytic vesicle membrane // traceable author statement /// 0043234 // protein complex // inferred from direct assay","0002039 // p53 binding // inferred from physical interaction /// 0002039 // p53 binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0004842 // ubiquitin-protein ligase activity // inferred from mutant phenotype /// 0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:69201965-69239321 (+) // 78.58 // q15"]
["11720947_x_at",0.061112404,0.006910324,0.015589237,-0.030993938,-0.006910324,-0.02144003,0.3826634,0.05898419,1.0335815,0.047652144,1.0335815,"up","CA12",771.0,"0006730 // one-carbon metabolic process // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0004089 // carbonate dehydratase activity // inferred from electronic annotation /// 0004089 // carbonate dehydratase activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008270 // zinc ion binding // traceable author statement /// 0016829 // lyase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr15:63614615-63674659 (-) // 87.76 // q22.2"]
["11733669_a_at",-0.029560566,0.013398409,0.20752192,0.13896894,-0.013398409,-0.033264637,0.9072413,0.73505,1.0231502,0.03301796,1.0231502,"up","PAX3",5077.0,"0000435 // positive regulation of transcription from RNA polymerase II promoter by galactose // inferred from direct assay /// 0000435 // positive regulation of transcription from RNA polymerase II promoter by galactose // inferred from electronic annotation /// 0001755 // neural crest cell migration // inferred from electronic annotation /// 0001843 // neural tube closure // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0007517 // muscle organ development // inferred from electronic annotation /// 0007605 // sensory perception of sound // traceable author statement /// 0008283 // cell proliferation // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0009725 // response to hormone stimulus // inferred from electronic annotation /// 0009887 // organ morphogenesis // traceable author statement /// 0016477 // cell migration // inferred from electronic annotation /// 0021527 // spinal cord association neuron differentiation // inferred from electronic annotation /// 0021549 // cerebellum development // inferred from electronic annotation /// 0021915 // neural tube development // inferred from electronic annotation /// 0030521 // androgen receptor signaling pathway // non-traceable author statement /// 0032355 // response to estradiol stimulus // inferred from electronic annotation /// 0032526 // response to retinoic acid // inferred from electronic annotation /// 0032570 // response to progesterone stimulus // inferred from electronic annotation /// 0032870 // cellular response to hormone stimulus // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043967 // histone H4 acetylation // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045666 // positive regulation of neuron differentiation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // non-traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048066 // developmental pigmentation // inferred from electronic annotation /// 0048663 // neuron fate commitment // inferred from electronic annotation /// 0060206 // estrous cycle phase // inferred from electronic annotation /// 0060594 // mammary gland specification // inferred from electronic annotation /// 2001038 // regulation of cellular response to drug // inferred from electronic annotation /// 2001141 // regulation of RNA biosynthetic process // inferred from electronic annotation","0000790 // nuclear chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from electronic annotation /// 0003713 // transcription coactivator activity // non-traceable author statement /// 0004402 // histone acetyltransferase activity // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0016922 // ligand-dependent nuclear receptor binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0030374 // ligand-dependent nuclear receptor transcription coactivator activity // inferred from direct assay /// 0035257 // nuclear hormone receptor binding // inferred from direct assay /// 0035257 // nuclear hormone receptor binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from physical interaction /// 0050681 // androgen receptor binding // non-traceable author statement","chr2:223158348-223163700 (-) // 93.5 // q36.1"]
["11750492_a_at",-0.03960991,-0.03074503,0.08162832,0.00884676,0.023519993,-0.008846283,0.9760651,0.9238592,-1.0028337,-0.004082418,1.0028337,"down","RNF216",54476.0,"0006915 // apoptotic process // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0032648 // regulation of interferon-beta production // inferred from direct assay /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0050691 // regulation of defense response to virus by host // inferred from direct assay /// 0070936 // protein K48-linked ubiquitination // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:5662209-5821257 (-) // 99.92 // p22.1"]
["11754372_x_at",0.03907442,0.0503788,0.010959148,-0.01095891,-0.09967375,-0.10919452,0.3101068,0.03303469,1.0767971,0.106746465,1.0767971,"up","CERS4",79603.0,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006665 // sphingolipid metabolic process // traceable author statement /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0030148 // sphingolipid biosynthetic process // traceable author statement /// 0030148 // sphingolipid biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046513 // ceramide biosynthetic process // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0050291 // sphingosine N-acyltransferase activity // inferred from electronic annotation","chr19:8315409-8327305 (+) // 87.21 // p13.2"]
["11753119_x_at",0.08407879,0.2065382,-0.07959223,-0.13889503,0.07959223,-0.18265676,0.6414076,0.26282477,1.1103349,0.15099485,1.1103349,"up","CMTM5",116173.0,"0006935 // chemotaxis // inferred from electronic annotation","0005615 // extracellular space // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005125 // cytokine activity // inferred from electronic annotation","chr14:23846254-23848980 (+) // 96.99 // q11.2"]
["11755632_a_at",0.08880377,-0.11075401,-0.14440441,-0.03178358,0.03546095,0.03178358,0.756948,0.42597285,-1.0477335,-0.067271866,1.0477335,"down","MYH14",79784.0,"0007411 // axon guidance // traceable author statement /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0030048 // actin filament-based movement // inferred from electronic annotation","0001725 // stress fiber // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016459 // myosin complex // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030426 // growth cone // inferred from electronic annotation","0000146 // microfilament motor activity // inferred from electronic annotation /// 0000166 // nucleotide binding // inferred from electronic annotation /// 0003774 // motor activity // inferred from electronic annotation /// 0003779 // actin binding // inferred from electronic annotation /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0030898 // actin-dependent ATPase activity // inferred from electronic annotation /// 0051015 // actin filament binding // inferred from electronic annotation","chr19:50783290-50813796 (+) // 92.75 // q13.33"]
["11755668_s_at",0.10925388,-0.013193607,0.061995983,0.010665894,-0.054128647,-0.010665894,0.5382476,0.1551248,1.0502467,0.07072827,1.0502467,"up","ATP5J2-PTCD1 /// PTCD1","100526740 /// 26024","","","","chr7:99016756-99036377 (-) // 99.84 // q22.1"]
["11717584_a_at",-0.024336815,0.050973892,-0.1397171,0.07454586,0.024336815,-0.04264164,0.7607859,0.43431935,-1.0398968,-0.056440424,1.0398968,"down","VAPB",9217.0,"0006665 // sphingolipid metabolic process // traceable author statement /// 0006874 // cellular calcium ion homeostasis // inferred from mutant phenotype /// 0006986 // response to unfolded protein // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // inferred from direct assay /// 0008219 // cell death // inferred from electronic annotation /// 0019048 // virus-host interaction // inferred from direct assay /// 0030148 // sphingolipid biosynthetic process // traceable author statement /// 0030968 // endoplasmic reticulum unfolded protein response // inferred from mutant phenotype /// 0044281 // small molecule metabolic process // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045070 // positive regulation of viral genome replication // inferred from mutant phenotype","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005198 // structural molecule activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from physical interaction /// 0048487 // beta-tubulin binding // inferred from direct assay","chr20:56964174-57022672 (+) // 94.01 // q13.32"]
["11755180_x_at",0.015499115,0.07308388,-0.015499115,-0.20664024,-0.032762527,0.12002134,0.82335246,0.5479182,1.0454725,0.06415512,1.0454725,"up","TCF7",6932.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // not recorded /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // not recorded /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006955 // immune response // traceable author statement /// 0007420 // brain development // not recorded /// 0016055 // Wnt receptor signaling pathway // not recorded /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0021915 // neural tube development // inferred from electronic annotation /// 0022008 // neurogenesis // not recorded /// 0030538 // embryonic genitalia morphogenesis // inferred from electronic annotation /// 0033153 // T cell receptor V(D)J recombination // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0046632 // alpha-beta T cell differentiation // inferred from electronic annotation /// 0048557 // embryonic digestive tract morphogenesis // inferred from electronic annotation /// 0048619 // embryonic hindgut morphogenesis // inferred from electronic annotation /// 0048699 // generation of neurons // not recorded /// 0060070 // canonical Wnt receptor signaling pathway // not recorded /// 0071353 // cellular response to interleukin-4 // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // not recorded","0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // not recorded /// 0003700 // sequence-specific DNA binding transcription factor activity // not recorded /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008013 // beta-catenin binding // not recorded /// 0043565 // sequence-specific DNA binding // not recorded /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay","chr5:133476225-133483927 (+) // 89.4 // q31.1"]
["11732370_a_at",0.010098457,0.02547741,0.07823849,-0.06612873,-0.010098457,-0.114868164,0.36016524,0.050100062,1.07299,0.10163655,1.07299,"up","CUX1",1523.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0000301 // retrograde transport, vesicle recycling within Golgi // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006891 // intra-Golgi vesicle-mediated transport // inferred from electronic annotation /// 0007275 // multicellular organismal development // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0042491 // auditory receptor cell differentiation // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030173 // integral to Golgi membrane // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0030674 // protein binding, bridging // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr7:101559392-101894560 (+) // 96.23 // q22.1"]
["11747698_x_at",-0.0998683,-0.005304575,0.15101004,-0.027831316,0.005304575,0.047034502,0.9784535,0.93022966,1.0049403,0.0071097575,1.0049403,"up","TCF4",6925.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006352 // transcription initiation, DNA-dependent // inferred from sequence or structural similarity /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0007399 // nervous system development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0065004 // protein-DNA complex assembly // inferred from sequence or structural similarity","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from sequence or structural similarity /// 0005667 // transcription factor complex // inferred from electronic annotation","0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from sequence or structural similarity /// 0001011 // sequence-specific DNA binding RNA polymerase recruiting transcription factor activity // inferred from sequence or structural similarity /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from sequence or structural similarity /// 0001087 // TFIIB-class binding transcription factor activity // inferred from sequence or structural similarity /// 0001093 // TFIIB-class transcription factor binding // inferred from sequence or structural similarity /// 0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003714 // transcription corepressor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from sequence or structural similarity /// 0046982 // protein heterodimerization activity // non-traceable author statement /// 0070888 // E-box binding // inferred from sequence or structural similarity","chr18:52895094-53089743 (-) // 97.67 // q21.2"]
["11729167_a_at",0.10123062,0.025419235,0.020420074,-0.08147669,-0.11536121,-0.020420074,0.31155866,0.033420026,1.0878221,0.12144261,1.0878221,"up","DCTD",1635.0,"0006206 // pyrimidine base metabolic process // traceable author statement /// 0006220 // pyrimidine nucleotide metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0009165 // nucleotide biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046134 // pyrimidine nucleoside biosynthetic process // traceable author statement /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement","0005829 // cytosol // traceable author statement","0003824 // catalytic activity // inferred from electronic annotation /// 0004132 // dCMP deaminase activity // not recorded /// 0004132 // dCMP deaminase activity // inferred from electronic annotation /// 0004132 // dCMP deaminase activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016810 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr4:183811246-183838747 (-) // 96.16 // q35.1"]
["11721598_a_at",-0.04726076,-0.05829692,-0.019432306,0.23883271,0.019432306,0.106449366,0.39759907,0.06548975,-1.1197951,-0.16323476,1.1197951,"down","EFS",10278.0,"0007155 // cell adhesion // inferred from electronic annotation /// 0035556 // intracellular signal transduction // traceable author statement","0005737 // cytoplasm // traceable author statement","0017124 // SH3 domain binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from physical interaction","chr14:23825610-23834961 (-) // 96.0 // q11.2"]
["11740575_a_at",0.017206669,-0.017206669,0.23855758,0.07802892,-0.10064387,-0.031077385,0.7170007,0.36550024,1.069856,0.09741669,1.069856,"up","SORCS1",114815.0,"0007218 // neuropeptide signaling pathway // non-traceable author statement","0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008188 // neuropeptide receptor activity // non-traceable author statement","chr10:108333420-108924466 (-) // 94.17 // q25.1"]
["11758323_s_at",-0.030895233,0.027672768,0.01540947,-0.08446407,-0.015409946,0.03310299,0.8146955,0.5316758,1.0184106,0.026319288,1.0184106,"up","VOPP1",81552.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007165 // signal transduction // inferred from mutant phenotype","0005768 // endosome // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from direct assay /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031301 // integral to organelle membrane // inferred from direct assay /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0004871 // signal transducer activity // inferred from mutant phenotype","chr1:148193220-148194190 (+) // 94.3 // q21.2 /// chr7:55540213-55640134 (-) // 90.13 // p11.2"]
["11732556_a_at",0.0012903214,-0.0012903214,0.011013508,0.21981955,-0.23519993,-0.10597277,0.91800845,0.760909,1.0310557,0.044122256,1.0310557,"up","FASLG",356.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // traceable author statement /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from genetic interaction /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from mutant phenotype /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // traceable author statement /// 0006925 // inflammatory cell apoptotic process // inferred from electronic annotation /// 0006955 // immune response // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008624 // induction of apoptosis by extracellular signals // inferred from direct assay /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0008624 // induction of apoptosis by extracellular signals // inferred from electronic annotation /// 0008625 // induction of apoptosis via death domain receptors // inferred from electronic annotation /// 0008633 // activation of pro-apoptotic gene products // traceable author statement /// 0016525 // negative regulation of angiogenesis // inferred from direct assay /// 0030644 // cellular chloride ion homeostasis // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0033554 // cellular response to stress // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from expression pattern /// 0043525 // positive regulation of neuron apoptotic process // inferred from electronic annotation /// 0045742 // positive regulation of epidermal growth factor receptor signaling pathway // inferred from electronic annotation /// 0046666 // retinal cell programmed cell death // inferred from electronic annotation /// 0048388 // endosomal lumen acidification // inferred from electronic annotation /// 0060554 // induction of necroptosis of activated-T cells // inferred from direct assay /// 0060555 // induction of necroptosis by extracellular signals // inferred from direct assay /// 0070265 // necrotic cell death // inferred from direct assay /// 0070848 // response to growth factor stimulus // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0005901 // caveola // inferred from electronic annotation /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043202 // lysosomal lumen // inferred from electronic annotation /// 0045121 // membrane raft // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0060205 // cytoplasmic membrane-bounded vesicle lumen // inferred from electronic annotation","0005102 // receptor binding // traceable author statement /// 0005125 // cytokine activity // inferred from electronic annotation /// 0005164 // tumor necrosis factor receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr1:172628147-172636013 (+) // 88.62 // q24.3"]
["11734601_at",0.02345419,0.047970533,-0.036588907,-0.02345419,-0.032194376,0.31334186,0.8284049,0.5583446,-1.0528398,-0.07428587,1.0528398,"down","TAS2R43 /// TAS2R45","259289 /// 259291","0001580 // detection of chemical stimulus involved in sensory perception of bitter taste // inferred from direct assay /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred by curator /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050909 // sensory perception of taste // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred by curator /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031514 // motile cilium // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation /// 0060170 // cilium membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0008527 // taste receptor activity // inferred from direct assay /// 0033038 // bitter taste receptor activity // inferred from direct assay","chr12:11243929-11244918 (-) // 82.6 // p13.2"]
["11736569_at",-0.14765525,0.039368153,0.031397104,-0.031397104,0.24420023,-0.26057673,0.98635644,0.9540183,-1.00675,-0.009705454,1.00675,"down","PON1",5444.0,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // inferred from electronic annotation /// 0009605 // response to external stimulus // non-traceable author statement /// 0009636 // response to toxin // inferred from electronic annotation /// 0010875 // positive regulation of cholesterol efflux // inferred from direct assay /// 0019439 // aromatic compound catabolic process // inferred from direct assay /// 0032411 // positive regulation of transporter activity // inferred from direct assay /// 0034445 // negative regulation of plasma lipoprotein particle oxidation // inferred from direct assay /// 0046395 // carboxylic acid catabolic process // inferred from direct assay /// 0046434 // organophosphate catabolic process // inferred from direct assay /// 0046470 // phosphatidylcholine metabolic process // inferred from direct assay /// 0051099 // positive regulation of binding // inferred from direct assay","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0034364 // high-density lipoprotein particle // inferred from direct assay /// 0034364 // high-density lipoprotein particle // traceable author statement /// 0034364 // high-density lipoprotein particle // inferred from electronic annotation /// 0034366 // spherical high-density lipoprotein particle // inferred from direct assay","0004063 // aryldialkylphosphatase activity // inferred from direct assay /// 0004063 // aryldialkylphosphatase activity // inferred from electronic annotation /// 0004064 // arylesterase activity // inferred from direct assay /// 0004064 // arylesterase activity // non-traceable author statement /// 0004064 // arylesterase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from direct assay /// 0005543 // phospholipid binding // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:94926987-94954019 (-) // 93.67 // q21.3"]
["11733011_x_at",0.26370192,-0.062736034,-0.053426266,0.0,0.0,0.20381403,0.96389246,0.88971984,-1.013087,-0.018758122,1.013087,"down","SLC44A4",80736.0,"0055085 // transmembrane transport // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr6:31830973-31846823 (-) // 87.5 // p21.33"]
["11752496_a_at",-0.031017065,0.031017065,-0.12527752,0.22897291,0.07269049,-0.24000645,0.8877805,0.68985164,-1.0441374,-0.062311515,1.0441374,"down","GAS7",8522.0,"0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0007050 // cell cycle arrest // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0030041 // actin filament polymerization // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0048812 // neuron projection morphogenesis // inferred from electronic annotation /// 0051017 // actin filament bundle assembly // inferred from electronic annotation","0001726 // ruffle // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005884 // actin filament // inferred from electronic annotation","0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0051015 // actin filament binding // inferred from electronic annotation","chr17:9819241-9939878 (-) // 99.9 // p13.1"]
["11744093_a_at",0.113842964,0.0681963,-0.006635666,-0.037902832,-0.117928505,0.006635666,0.45719123,0.09931495,1.0778824,0.1081998,1.0778824,"up","EEF1A2",1917.0,"0006184 // GTP catabolic process // inferred from electronic annotation /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006414 // translational elongation // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from electronic annotation /// 0010035 // response to inorganic substance // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005853 // eukaryotic translation elongation factor 1 complex // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003746 // translation elongation factor activity // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0008135 // translation factor activity, nucleic acid binding // non-traceable author statement","chr20:62119364-62130668 (-) // 86.17 // q13.33"]
["11733928_a_at",0.104316235,-0.053683758,-0.084056854,-0.053175926,0.12364149,0.053175926,0.8176443,0.5377884,-1.0369564,-0.052355275,1.0369564,"down","ARMC8",25852.0,"","","","chr3:137906147-137965728 (+) // 94.37 // q22.3"]
["11746668_a_at",-0.021368027,0.019118309,0.07469654,-0.01665306,0.01665306,-0.026668549,0.7026557,0.3434115,1.0231647,0.033038463,1.0231647,"up","ALDH9A1",223.0,"0001822 // kidney development // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0006081 // cellular aldehyde metabolic process // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation /// 0009437 // carnitine metabolic process // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042136 // neurotransmitter biosynthetic process // inferred from direct assay /// 0042445 // hormone metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045329 // carnitine biosynthetic process // inferred from electronic annotation /// 0045329 // carnitine biosynthetic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay","0004028 // 3-chloroallyl aldehyde dehydrogenase activity // traceable author statement /// 0004029 // aldehyde dehydrogenase (NAD) activity // inferred from direct assay /// 0004029 // aldehyde dehydrogenase (NAD) activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016620 // oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0019145 // aminobutyraldehyde dehydrogenase activity // inferred from direct assay /// 0019145 // aminobutyraldehyde dehydrogenase activity // inferred from electronic annotation /// 0033737 // 1-pyrroline dehydrogenase activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0043176 // amine binding // inferred from electronic annotation /// 0047105 // 4-trimethylammoniobutyraldehyde dehydrogenase activity // inferred from electronic annotation /// 0051287 // NAD binding // inferred from electronic annotation","chr1:165637910-165667823 (-) // 88.96 // q24.1"]
["11727335_a_at",-0.13223362,0.012533188,0.053776264,0.026576519,-0.012533188,-0.05013132,0.95994514,0.8775836,-1.0069175,-0.00994545,1.0069175,"down","ACMSD",130013.0,"0006569 // tryptophan catabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046874 // quinolinate metabolic process // inferred from direct assay","0005829 // cytosol // inferred from direct assay","0001760 // aminocarboxymuconate-semialdehyde decarboxylase activity // inferred from direct assay /// 0001760 // aminocarboxymuconate-semialdehyde decarboxylase activity // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0016831 // carboxy-lyase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:135596185-135659645 (+) // 98.38 // q21.3"]
["11737440_a_at",-0.020486832,-0.20941353,-0.07944012,0.13960361,0.020486832,0.14000607,0.33731955,0.041377045,-1.1512058,-0.20314574,1.1512058,"down","BMF",90427.0,"0006915 // apoptotic process // inferred from sequence or structural similarity /// 0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0008629 // induction of apoptosis by intracellular signals // traceable author statement /// 0008633 // activation of pro-apoptotic gene products // traceable author statement /// 0032464 // positive regulation of protein homooligomerization // inferred from sequence or structural similarity /// 0032464 // positive regulation of protein homooligomerization // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0090200 // positive regulation of release of cytochrome c from mitochondria // inferred from sequence or structural similarity /// 0090200 // positive regulation of release of cytochrome c from mitochondria // inferred from electronic annotation","0001669 // acrosomal vesicle // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0016459 // myosin complex // inferred from sequence or structural similarity /// 0016459 // myosin complex // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr15:40380093-40398649 (-) // 95.53 // q15.1"]
["11723103_x_at",-0.05798149,-0.07437134,0.048506737,-0.048507214,0.17778444,0.07874441,0.64640695,0.26960015,-1.0697615,-0.097289205,1.0697615,"down","GNB4",59345.0,"0006112 // energy reserve metabolic process // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0071377 // cellular response to glucagon stimulus // traceable author statement","0005886 // plasma membrane // traceable author statement","0004871 // signal transducer activity // inferred from electronic annotation","chr3:179113610-179169378 (-) // 82.48 // q26.33"]
["11746836_a_at",-0.039872408,-0.26435542,0.06792569,0.021333694,0.062104464,-0.021333694,0.7255764,0.37958097,-1.071379,-0.09946885,1.071379,"down","TMEFF2",23671.0,"","0005576 // extracellular region // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","","chr2:192813774-193059642 (-) // 97.2 // q32.3"]
["11759529_at",0.113708735,0.0050127506,0.0075802803,-0.110964775,-0.005012989,-0.114090204,0.4236016,0.07900744,1.0858238,0.11878998,1.0858238,"up","ZC3H15",55854.0,"0019221 // cytokine-mediated signaling pathway // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:187350884-187374697 (+) // 95.33 // q32.1"]
["11725792_a_at",0.059442997,-0.011395931,-0.011577129,0.0047397614,-0.004740238,0.10874224,0.8512936,0.60812163,-1.0168386,-0.024090633,1.0168386,"down","MRE11A",4361.0,"0000019 // regulation of mitotic recombination // traceable author statement /// 0000075 // cell cycle checkpoint // inferred from electronic annotation /// 0000724 // double-strand break repair via homologous recombination // traceable author statement /// 0006259 // DNA metabolic process // inferred from electronic annotation /// 0006281 // DNA repair // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006302 // double-strand break repair // traceable author statement /// 0006302 // double-strand break repair // inferred from electronic annotation /// 0006303 // double-strand break repair via nonhomologous end joining // traceable author statement /// 0006310 // DNA recombination // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from direct assay /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007004 // telomere maintenance via telomerase // traceable author statement /// 0007062 // sister chromatid cohesion // inferred from mutant phenotype /// 0007126 // meiosis // inferred from electronic annotation /// 0007129 // synapsis // inferred from electronic annotation /// 0007131 // reciprocal meiotic recombination // traceable author statement /// 0007507 // heart development // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from electronic annotation /// 0031954 // positive regulation of protein autophosphorylation // inferred from direct assay /// 0032508 // DNA duplex unwinding // inferred from mutant phenotype /// 0032876 // negative regulation of DNA endoreduplication // inferred from mutant phenotype /// 0033674 // positive regulation of kinase activity // inferred from direct assay /// 0051276 // chromosome organization // inferred from electronic annotation /// 0090305 // nucleic acid phosphodiester bond hydrolysis // traceable author statement /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation","0000781 // chromosome, telomeric region // inferred from direct assay /// 0000790 // nuclear chromatin // inferred from electronic annotation /// 0000794 // condensed nuclear chromosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0030870 // Mre11 complex // inferred from direct assay /// 0030870 // Mre11 complex // non-traceable author statement /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0000014 // single-stranded DNA specific endodeoxyribonuclease activity // traceable author statement /// 0003677 // DNA binding // inferred from direct assay /// 0003690 // double-stranded DNA binding // traceable author statement /// 0004003 // ATP-dependent DNA helicase activity // inferred from mutant phenotype /// 0004518 // nuclease activity // traceable author statement /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004519 // endonuclease activity // inferred from electronic annotation /// 0004520 // endodeoxyribonuclease activity // traceable author statement /// 0004527 // exonuclease activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0008408 // 3'-5' exonuclease activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0030145 // manganese ion binding // inferred from electronic annotation","chr11:94150170-94227040 (-) // 92.53 // q21"]
["11757741_s_at",-0.09553623,-0.01972866,0.08014822,0.008741379,-0.008741379,0.038075447,0.8782479,0.6673265,-1.0170548,-0.02439741,1.0170548,"down","SOX4",6659.0,"0001501 // skeletal system development // inferred from sequence or structural similarity /// 0001501 // skeletal system development // inferred from electronic annotation /// 0001841 // neural tube formation // inferred from sequence or structural similarity /// 0001841 // neural tube formation // inferred from electronic annotation /// 0002328 // pro-B cell differentiation // inferred from sequence or structural similarity /// 0002328 // pro-B cell differentiation // inferred from electronic annotation /// 0003183 // mitral valve morphogenesis // inferred from sequence or structural similarity /// 0003183 // mitral valve morphogenesis // inferred from electronic annotation /// 0003211 // cardiac ventricle formation // inferred from sequence or structural similarity /// 0003211 // cardiac ventricle formation // inferred from electronic annotation /// 0003215 // cardiac right ventricle morphogenesis // inferred from sequence or structural similarity /// 0003215 // cardiac right ventricle morphogenesis // inferred from electronic annotation /// 0003289 // atrial septum primum morphogenesis // inferred from sequence or structural similarity /// 0003289 // atrial septum primum morphogenesis // inferred from electronic annotation /// 0003357 // noradrenergic neuron differentiation // inferred from sequence or structural similarity /// 0003357 // noradrenergic neuron differentiation // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // inferred from mutant phenotype /// 0007507 // heart development // inferred from sequence or structural similarity /// 0007507 // heart development // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0014009 // glial cell proliferation // inferred from sequence or structural similarity /// 0014009 // glial cell proliferation // inferred from electronic annotation /// 0021510 // spinal cord development // inferred from sequence or structural similarity /// 0021510 // spinal cord development // inferred from electronic annotation /// 0021522 // spinal cord motor neuron differentiation // inferred from sequence or structural similarity /// 0021522 // spinal cord motor neuron differentiation // inferred from electronic annotation /// 0021782 // glial cell development // inferred from sequence or structural similarity /// 0021782 // glial cell development // inferred from electronic annotation /// 0030177 // positive regulation of Wnt receptor signaling pathway // inferred from sequence or structural similarity /// 0030177 // positive regulation of Wnt receptor signaling pathway // inferred from electronic annotation /// 0030217 // T cell differentiation // inferred from sequence or structural similarity /// 0030217 // T cell differentiation // inferred from electronic annotation /// 0031018 // endocrine pancreas development // inferred from electronic annotation /// 0031397 // negative regulation of protein ubiquitination // inferred from mutant phenotype /// 0031647 // regulation of protein stability // inferred from mutant phenotype /// 0032024 // positive regulation of insulin secretion // inferred from sequence or structural similarity /// 0032024 // positive regulation of insulin secretion // inferred from electronic annotation /// 0035019 // somatic stem cell maintenance // inferred from electronic annotation /// 0035910 // ascending aorta morphogenesis // inferred from sequence or structural similarity /// 0035910 // ascending aorta morphogenesis // inferred from electronic annotation /// 0042593 // glucose homeostasis // inferred from sequence or structural similarity /// 0042593 // glucose homeostasis // inferred from electronic annotation /// 0042769 // DNA damage response, detection of DNA damage // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0045727 // positive regulation of translation // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046826 // negative regulation of protein export from nucleus // inferred from mutant phenotype /// 0048485 // sympathetic nervous system development // inferred from sequence or structural similarity /// 0048485 // sympathetic nervous system development // inferred from electronic annotation /// 0050821 // protein stabilization // inferred from mutant phenotype /// 0050821 // protein stabilization // inferred from electronic annotation /// 0060070 // canonical Wnt receptor signaling pathway // inferred from sequence or structural similarity /// 0060070 // canonical Wnt receptor signaling pathway // inferred from electronic annotation /// 0060174 // limb bud formation // inferred from sequence or structural similarity /// 0060174 // limb bud formation // inferred from electronic annotation /// 0060412 // ventricular septum morphogenesis // inferred from sequence or structural similarity /// 0060412 // ventricular septum morphogenesis // inferred from electronic annotation /// 0060548 // negative regulation of cell death // inferred from sequence or structural similarity /// 0060548 // negative regulation of cell death // inferred from electronic annotation /// 0060563 // neuroepithelial cell differentiation // inferred from sequence or structural similarity /// 0060563 // neuroepithelial cell differentiation // inferred from electronic annotation /// 0060993 // kidney morphogenesis // inferred from sequence or structural similarity /// 0060993 // kidney morphogenesis // inferred from electronic annotation /// 0071333 // cellular response to glucose stimulus // inferred from sequence or structural similarity /// 0071333 // cellular response to glucose stimulus // inferred from electronic annotation /// 0090263 // positive regulation of canonical Wnt receptor signaling pathway // inferred from sequence or structural similarity /// 0090263 // positive regulation of canonical Wnt receptor signaling pathway // inferred from electronic annotation /// 2000761 // positive regulation of N-terminal peptidyl-lysine acetylation // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay","0000976 // transcription regulatory region sequence-specific DNA binding // inferred from sequence or structural similarity /// 0000976 // transcription regulatory region sequence-specific DNA binding // inferred from electronic annotation /// 0001046 // core promoter sequence-specific DNA binding // inferred from direct assay /// 0001046 // core promoter sequence-specific DNA binding // inferred from electronic annotation /// 0001071 // nucleic acid binding transcription factor activity // inferred from mutant phenotype /// 0001071 // nucleic acid binding transcription factor activity // inferred from electronic annotation /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from direct assay /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from electronic annotation /// 0001105 // RNA polymerase II transcription coactivator activity // inferred from sequence or structural similarity /// 0001105 // RNA polymerase II transcription coactivator activity // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr6:21596716-21597392 (+) // 94.1 // p22.3"]
["11727551_a_at",0.006115675,0.028228283,-0.0026278496,0.0026276112,-0.04008031,-0.11722088,0.54563266,0.16171369,1.0440059,0.062129825,1.0440059,"up","ADAMTS10",81794.0,"0006508 // proteolysis // inferred from electronic annotation /// 0007229 // integrin-mediated signaling pathway // inferred from electronic annotation","0001527 // microfibril // inferred from direct assay /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from electronic annotation","0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:8645125-8673133 (-) // 97.65 // p13.2"]
["11721902_a_at",0.13108253,-0.047324657,-0.15744781,0.035927773,0.07174301,-0.035927773,0.85542005,0.61806524,-1.0341731,-0.048477728,1.0341731,"down","SERPINI1",5274.0,"0007417 // central nervous system development // traceable author statement /// 0007422 // peripheral nervous system development // traceable author statement /// 0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // not recorded /// 0030155 // regulation of cell adhesion // inferred from electronic annotation /// 0030162 // regulation of proteolysis // not recorded","0005576 // extracellular region // inferred from electronic annotation","0004867 // serine-type endopeptidase inhibitor activity // not recorded /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0004867 // serine-type endopeptidase inhibitor activity // traceable author statement /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation","chr3:167453510-167543560 (+) // 99.62 // q26.1"]
["11763571_at",0.06612158,-0.044011593,-0.2668481,0.044011593,-0.15669155,0.049028397,0.86461216,0.63891506,-1.0427275,-0.06036214,1.0427275,"down","SLC1A7",6512.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006835 // dicarboxylic acid transport // traceable author statement /// 0006835 // dicarboxylic acid transport // inferred from electronic annotation /// 0015813 // L-glutamate transport // traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0005313 // L-glutamate transmembrane transporter activity // traceable author statement /// 0015293 // symporter activity // inferred from electronic annotation /// 0017153 // sodium:dicarboxylate symporter activity // inferred from electronic annotation","chr1:53580247-53584281 (+) // 83.97 // p32.3"]
["11746180_a_at",-0.0694561,-0.07824993,-0.014636993,0.014636993,0.09539604,0.027827263,0.31707066,0.03516374,-1.0718238,-0.1000678,1.0718238,"down","CD55",1604.0,"0006958 // complement activation, classical pathway // inferred from electronic annotation /// 0007204 // elevation of cytosolic calcium ion concentration // inferred from direct assay /// 0030449 // regulation of complement activation // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation /// 0045730 // respiratory burst // non-traceable author statement","0005576 // extracellular region // traceable author statement /// 0005625 // soluble fraction // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0031225 // anchored to membrane // inferred from electronic annotation /// 0045121 // membrane raft // inferred from direct assay","0004872 // receptor activity // inferred from electronic annotation","chr1:207495077-207533846 (+) // 96.56 // q32.2"]
["11759203_a_at",-0.04303837,-0.23984575,0.07688856,-0.026377678,0.026377678,0.05068493,0.75181884,0.41909727,-1.0610996,-0.08556014,1.0610996,"down","ZNF223 /// ZNF284","342909 /// 7766","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:44556163-44572142 (+) // 79.7 // q13.31"]
["11736723_a_at",-0.02422285,-0.014455318,0.014455318,0.07779789,-0.019975662,0.014455318,0.71133596,0.356635,-1.0225468,-0.032166827,1.0225468,"down","PDLIM7",9260.0,"0001503 // ossification // inferred from electronic annotation /// 0006898 // receptor-mediated endocytosis // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045669 // positive regulation of osteoblast differentiation // inferred from electronic annotation","0001725 // stress fiber // inferred from electronic annotation /// 0001726 // ruffle // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0030054 // cell junction // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr5:176910394-176924602 (-) // 100.0 // q35.3"]
["11736662_a_at",0.0014426708,0.050760984,-0.14725828,-0.0014426708,-0.10995507,0.003525734,0.9863795,0.9543194,1.0029658,0.0042724237,1.0029658,"up","CADPS2",93664.0,"0006810 // transport // inferred from electronic annotation /// 0006887 // exocytosis // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016082 // synaptic vesicle priming // inferred from electronic annotation /// 0045921 // positive regulation of exocytosis // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0042734 // presynaptic membrane // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0005543 // phospholipid binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:121958478-122526554 (-) // 97.07 // q31.32"]
["11725019_a_at",-0.0058808327,-0.031986713,-0.09228802,0.0835309,0.0058808327,0.09381151,0.36123997,0.05047824,-1.0750916,-0.104459584,1.0750916,"down","MST1R",4486.0,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0006928 // cellular component movement // traceable author statement /// 0006952 // defense response // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007338 // single fertilization // traceable author statement /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0009615 // response to virus // inferred from direct assay /// 0009615 // response to virus // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0038145 // macrophage colony-stimulating factor signaling pathway // traceable author statement /// 0043406 // positive regulation of MAP kinase activity // inferred from direct assay /// 0045087 // innate immune response // inferred from electronic annotation /// 0051897 // positive regulation of protein kinase B signaling cascade // inferred from direct assay","0001725 // stress fiber // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005011 // macrophage colony-stimulating factor receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction","chr3:49924437-49941306 (-) // 96.95 // p21.31"]
["11727803_at",-0.0022296906,-0.052776337,-0.054267883,0.03570366,0.05129242,0.0022296906,0.338441,0.04183664,-1.0469311,-0.066166565,1.0469311,"down","GJA9-MYCBP /// MYCBP","100527950 /// 26292","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from expression pattern","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay","0003713 // transcription coactivator activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction","chr1:39328636-39340206 (-) // 88.2 // p34.3"]
["11740937_x_at",0.086900234,0.035122395,0.047384262,-0.035122395,-0.03756523,-0.042698383,0.14187962,0.0038456249,1.0680143,0.09493092,1.0680143,"up","LIAS",11019.0,"0001843 // neural tube closure // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from sequence or structural similarity /// 0006954 // inflammatory response // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from sequence or structural similarity /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0009107 // lipoate biosynthetic process // inferred from sequence or structural similarity /// 0009107 // lipoate biosynthetic process // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from sequence or structural similarity /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation","0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005739 // mitochondrion // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016992 // lipoate synthase activity // inferred from sequence or structural similarity /// 0016992 // lipoate synthase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation /// 0051539 // 4 iron, 4 sulfur cluster binding // inferred from electronic annotation","chr4:39460664-39479269 (+) // 80.02 // p14"]
["11740966_a_at",-0.10882926,-0.075840235,-0.08103967,0.07584,0.19453788,0.17151237,0.13441989,0.0033472308,-1.1776137,-0.2358664,1.1776137,"down","LOC391322",391322.0,"","","","chr22:24373110-24376211 (+) // 93.91 // q11.23"]
["11732166_a_at",-0.016857147,0.124742985,-0.07166481,0.11400652,0.0034775734,-0.0034775734,0.90422934,0.72912997,-1.0181347,-0.025928462,1.0181347,"down","LMF1",64788.0,"0006888 // ER to Golgi vesicle-mediated transport // inferred from electronic annotation /// 0009306 // protein secretion // inferred from electronic annotation /// 0033578 // protein glycosylation in Golgi // inferred from electronic annotation /// 0034382 // chylomicron remnant clearance // inferred from electronic annotation /// 0051006 // positive regulation of lipoprotein lipase activity // inferred from electronic annotation /// 0051604 // protein maturation // inferred from electronic annotation /// 0090181 // regulation of cholesterol metabolic process // inferred from electronic annotation /// 0090207 // regulation of triglyceride metabolic process // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr16:903629-1020999 (-) // 98.26 // p13.3"]
["11715128_s_at",0.004184723,0.02767229,-0.17901516,-0.004184723,-0.14340878,0.07284641,0.9346873,0.80384123,-1.0168712,-0.024136974,1.0168712,"down","PCDHGB5",56101.0,"0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr5:140777694-140780151 (+) // 100.0 // q31.3"]
["11728841_a_at",-0.06656885,-0.14197493,0.15634823,0.029956818,-0.029956818,0.09360838,0.8653164,0.6406608,-1.0342617,-0.04860128,1.0342617,"down","PLEKHA5",54477.0,"","","0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0005545 // 1-phosphatidylinositol binding // non-traceable author statement","chr12:19282628-19529334 (+) // 96.91 // p12.3"]
["11724615_at",-0.09887648,0.028013706,0.13909483,0.04856825,-0.028013706,-0.19806623,0.77623856,0.4594886,1.0584217,0.08191459,1.0584217,"up","LIMK1",3984.0,"0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // non-traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007266 // Rho protein signal transduction // traceable author statement /// 0007399 // nervous system development // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // traceable author statement /// 0032233 // positive regulation of actin filament bundle assembly // inferred from direct assay /// 0045773 // positive regulation of axon extension // inferred from sequence or structural similarity /// 0051444 // negative regulation of ubiquitin-protein ligase activity // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0043005 // neuron projection // inferred from sequence or structural similarity","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // non-traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0031072 // heat shock protein binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:73498155-73536855 (+) // 95.33 // q11.23"]
["11723313_s_at",0.043660164,-0.008906364,0.06150341,-0.07566643,0.008906364,-0.015721321,0.5234042,0.14367521,1.042162,0.059579473,1.042162,"up","PXMP2",5827.0,"","0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005777 // peroxisome // inferred from electronic annotation /// 0005778 // peroxisomal membrane // inferred from direct assay /// 0005778 // peroxisomal membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr12:133264125-133281571 (+) // 97.22 // q24.33"]
["11726087_at",0.0,0.0,0.1710875,-0.01480031,-0.026751757,0.0015256405,0.662073,0.28899598,1.0499868,0.07037124,1.0499868,"up","HSPB3",8988.0,"0006950 // response to stress // inferred from electronic annotation /// 0006986 // response to unfolded protein // traceable author statement /// 0008219 // cell death // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","","chr5:53751430-53752207 (+) // 98.73 // q11.2"]
["11723247_a_at",0.009593964,-0.024925709,-0.091400385,0.16373587,0.12532187,-0.009593964,0.45785344,0.09981155,-1.0933323,-0.12873194,1.0933323,"down","SFRP1",6422.0,"0001649 // osteoblast differentiation // inferred from expression pattern /// 0001649 // osteoblast differentiation // inferred from electronic annotation /// 0001657 // ureteric bud development // inferred from electronic annotation /// 0001756 // somitogenesis // inferred from electronic annotation /// 0001843 // neural tube closure // inferred from electronic annotation /// 0001944 // vasculature development // not recorded /// 0001954 // positive regulation of cell-matrix adhesion // inferred from sequence or structural similarity /// 0002244 // hemopoietic progenitor cell differentiation // inferred from direct assay /// 0006309 // apoptotic DNA fragmentation // inferred from direct assay /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007420 // brain development // not recorded /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0008406 // gonad development // not recorded /// 0008584 // male gonad development // inferred from electronic annotation /// 0008585 // female gonad development // inferred from electronic annotation /// 0009267 // cellular response to starvation // inferred from expression pattern /// 0009790 // embryo development // not recorded /// 0009950 // dorsal/ventral axis specification // inferred from direct assay /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0010564 // regulation of cell cycle process // inferred from mutant phenotype /// 0010629 // negative regulation of gene expression // inferred from direct assay /// 0010629 // negative regulation of gene expression // inferred from electronic annotation /// 0010719 // negative regulation of epithelial to mesenchymal transition // inferred from direct assay /// 0014034 // neural crest cell fate commitment // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from direct assay /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0021915 // neural tube development // inferred from electronic annotation /// 0022601 // menstrual cycle phase // inferred from expression pattern /// 0030097 // hemopoiesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030177 // positive regulation of Wnt receptor signaling pathway // inferred from direct assay /// 0030178 // negative regulation of Wnt receptor signaling pathway // inferred from direct assay /// 0030178 // negative regulation of Wnt receptor signaling pathway // inferred from mutant phenotype /// 0030178 // negative regulation of Wnt receptor signaling pathway // inferred from electronic annotation /// 0030278 // regulation of ossification // inferred from electronic annotation /// 0030279 // negative regulation of ossification // inferred from direct assay /// 0030279 // negative regulation of ossification // inferred from mutant phenotype /// 0030279 // negative regulation of ossification // inferred from electronic annotation /// 0030307 // positive regulation of cell growth // inferred from direct assay /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0030336 // negative regulation of cell migration // inferred from direct assay /// 0030514 // negative regulation of BMP signaling pathway // inferred from electronic annotation /// 0032855 // positive regulation of Rac GTPase activity // inferred from sequence or structural similarity /// 0033689 // negative regulation of osteoblast proliferation // inferred from mutant phenotype /// 0033689 // negative regulation of osteoblast proliferation // inferred from electronic annotation /// 0035019 // somatic stem cell maintenance // inferred from electronic annotation /// 0042493 // response to drug // inferred from direct assay /// 0042493 // response to drug // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0044344 // cellular response to fibroblast growth factor stimulus // inferred from direct assay /// 0044345 // stromal-epithelial cell signaling involved in prostate gland development // inferred from electronic annotation /// 0045578 // negative regulation of B cell differentiation // inferred from mutant phenotype /// 0045578 // negative regulation of B cell differentiation // inferred from electronic annotation /// 0045600 // positive regulation of fat cell differentiation // inferred from direct assay /// 0045668 // negative regulation of osteoblast differentiation // inferred from electronic annotation /// 0045671 // negative regulation of osteoclast differentiation // inferred from electronic annotation /// 0045765 // regulation of angiogenesis // inferred from sequence or structural similarity /// 0045880 // positive regulation of smoothened signaling pathway // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0046546 // development of primary male sexual characteristics // inferred from electronic annotation /// 0046676 // negative regulation of insulin secretion // inferred from direct assay /// 0046851 // negative regulation of bone remodeling // inferred from mutant phenotype /// 0048147 // negative regulation of fibroblast proliferation // inferred from direct assay /// 0050679 // positive regulation of epithelial cell proliferation // inferred from mutant phenotype /// 0050680 // negative regulation of epithelial cell proliferation // inferred from direct assay /// 0050732 // negative regulation of peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0051496 // positive regulation of stress fiber assembly // inferred from sequence or structural similarity /// 0051894 // positive regulation of focal adhesion assembly // inferred from sequence or structural similarity /// 0060070 // canonical Wnt receptor signaling pathway // inferred from direct assay /// 0060071 // Wnt receptor signaling pathway, planar cell polarity pathway // inferred from electronic annotation /// 0060218 // hemopoietic stem cell differentiation // inferred from direct assay /// 0060346 // bone trabecula formation // inferred from electronic annotation /// 0060527 // prostate epithelial cord arborization involved in prostate glandular acinus morphogenesis // inferred from electronic annotation /// 0060687 // regulation of branching involved in prostate gland morphogenesis // inferred from electronic annotation /// 0060766 // negative regulation of androgen receptor signaling pathway // inferred from direct assay /// 0071305 // cellular response to vitamin D // inferred from expression pattern /// 0071347 // cellular response to interleukin-1 // inferred from expression pattern /// 0071356 // cellular response to tumor necrosis factor // inferred from direct assay /// 0071363 // cellular response to growth factor stimulus // inferred from direct assay /// 0071380 // cellular response to prostaglandin E stimulus // inferred from expression pattern /// 0071380 // cellular response to prostaglandin E stimulus // inferred from electronic annotation /// 0071391 // cellular response to estrogen stimulus // inferred from direct assay /// 0071391 // cellular response to estrogen stimulus // inferred from electronic annotation /// 0071392 // cellular response to estradiol stimulus // inferred from expression pattern /// 0071456 // cellular response to hypoxia // inferred from expression pattern /// 0071481 // cellular response to X-ray // inferred from electronic annotation /// 0071504 // cellular response to heparin // inferred from direct assay /// 0071560 // cellular response to transforming growth factor beta stimulus // inferred from expression pattern /// 0071773 // cellular response to BMP stimulus // inferred from expression pattern /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from direct assay /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from mutant phenotype /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from electronic annotation /// 0090263 // positive regulation of canonical Wnt receptor signaling pathway // inferred from direct assay /// 2000052 // positive regulation of non-canonical Wnt receptor signaling pathway // inferred from direct assay /// 2000054 // negative regulation of Wnt receptor signaling pathway involved in dorsal/ventral axis specification // inferred from direct assay /// 2000080 // negative regulation of canonical Wnt receptor signaling pathway involved in controlling type B pancreatic cell proliferation // inferred from direct assay /// 2000117 // negative regulation of cysteine-type endopeptidase activity // inferred from mutant phenotype /// 2000270 // negative regulation of fibroblast apoptotic process // inferred from direct assay /// 2000271 // positive regulation of fibroblast apoptotic process // inferred from direct assay","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from direct assay /// 0005615 // extracellular space // inferred from direct assay /// 0005622 // intracellular // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005886 // plasma membrane // not recorded /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0009986 // cell surface // inferred from direct assay /// 0031012 // extracellular matrix // inferred from direct assay /// 0042995 // cell projection // not recorded","0004197 // cysteine-type endopeptidase activity // inferred from mutant phenotype /// 0005109 // frizzled binding // inferred from physical interaction /// 0008144 // drug binding // inferred from direct assay /// 0008201 // heparin binding // inferred from direct assay /// 0017147 // Wnt-protein binding // inferred from physical interaction /// 0017147 // Wnt-protein binding // inferred from electronic annotation /// 0030165 // PDZ domain binding // not recorded /// 0042802 // identical protein binding // inferred from physical interaction /// 0042813 // Wnt-activated receptor activity // not recorded","chr8:41119477-41166990 (-) // 97.65 // p11.21"]
["11745412_s_at",-0.045805454,-0.20091915,0.07047701,-0.08829498,0.19108868,0.045805454,0.73306865,0.3908364,-1.077944,-0.10828228,1.077944,"down","LOC441178",441178.0,"","","","chr6:168083767-168084736 (-) // 99.38 // q27"]
["11757242_x_at",-0.045144558,-0.02074194,0.027343273,0.02074194,-0.16836977,0.03783989,0.91333413,0.74949193,1.0165973,0.023748262,1.0165973,"up","LOC339240",339240.0,"","0005576 // extracellular region // inferred from electronic annotation","","chr17:18325494-18328647 (+) // 80.24 // p11.2 /// chr17:20422385-20425541 (-) // 82.71 // p11.2 /// chr17:16750714-16753867 (-) // 73.04 // p11.2"]
["11744034_a_at",-0.010286331,-0.041330338,0.033973694,0.02542305,-0.002117157,0.002117157,0.834888,0.57378685,-1.01,-0.0143552795,1.01,"down","VASP",7408.0,"0001843 // neural tube closure // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007411 // axon guidance // inferred from electronic annotation /// 0008154 // actin polymerization or depolymerization // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0034329 // cell junction assembly // traceable author statement /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0051289 // protein homotetramerization // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0005925 // focal adhesion // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030175 // filopodium // inferred from electronic annotation /// 0031258 // lamellipodium membrane // inferred from electronic annotation /// 0031527 // filopodium membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005522 // profilin binding // inferred from physical interaction /// 0017124 // SH3 domain binding // inferred from electronic annotation","chr19:46010694-46030241 (+) // 89.99 // q13.32"]
["11741280_s_at",-0.003386736,-0.093588114,-0.10650349,0.003386736,0.17071533,0.10438681,0.36467722,0.051495925,-1.1177951,-0.16065577,1.1177951,"down","CASC1",55259.0,"","0005881 // cytoplasmic microtubule // inferred from electronic annotation","0008017 // microtubule binding // inferred from electronic annotation /// 0048487 // beta-tubulin binding // inferred from electronic annotation","chr12:25261223-25348094 (-) // 99.41 // p12.1"]
["11757313_s_at",0.023010254,0.036923885,0.059199333,-0.023009777,-0.036600113,-0.06393051,0.17673707,0.0071955095,1.0576713,0.08089135,1.0576713,"up","VAT1",10493.0,"0010637 // negative regulation of mitochondrial fusion // inferred from mutant phenotype /// 0016049 // cell growth // non-traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005634 // nucleus // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation","chr17:41166623-41167974 (-) // 92.54 // q21.31"]
["11727264_at",0.0015435219,0.04252577,-0.075908184,0.16481352,-0.16028452,-0.0015439987,0.9726067,0.91324776,-1.0080785,-0.011607924,1.0080785,"down","LRRC8E",80131.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr19:7953389-7966901 (+) // 85.61 // p13.2"]
["11751320_a_at",0.041422367,-0.040796757,-0.03824663,0.064153194,-0.04534483,0.03824663,0.7982337,0.50053024,-1.0221158,-0.031558692,1.0221158,"down","POLL",27343.0,"0006260 // DNA replication // non-traceable author statement /// 0006260 // DNA replication // inferred from electronic annotation /// 0006281 // DNA repair // inferred from electronic annotation /// 0006289 // nucleotide-excision repair // inferred from direct assay /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0016446 // somatic hypermutation of immunoglobulin genes // non-traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // non-traceable author statement /// 0003824 // catalytic activity // inferred from electronic annotation /// 0003887 // DNA-directed DNA polymerase activity // inferred from electronic annotation /// 0003887 // DNA-directed DNA polymerase activity // non-traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016779 // nucleotidyltransferase activity // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr10:103338990-103348006 (-) // 99.86 // q24.32"]
["11722091_a_at",-0.027386189,-0.07349825,0.027386189,0.110328674,-0.033088684,0.061235905,0.6228675,0.23966433,-1.0501956,-0.07065802,1.0501956,"down","PRR5",55615.0,"0007049 // cell cycle // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0030036 // actin cytoskeleton organization // inferred from direct assay /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0032321 // positive regulation of Rho GTPase activity // inferred from direct assay /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from direct assay /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005096 // GTPase activator activity // inferred from direct assay /// 0005100 // Rho GTPase activator activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction","chr22:45072687-45133561 (+) // 97.79 // q13.31"]
["11718474_a_at",-0.03505802,-0.05796337,-0.058983803,0.060620308,0.03505802,0.047564507,0.08459432,7.889781E-4,-1.0705974,-0.09841607,1.0705974,"down","IDH1",3417.0,"0006097 // glyoxylate cycle // inferred from electronic annotation /// 0006099 // tricarboxylic acid cycle // inferred from electronic annotation /// 0006102 // isocitrate metabolic process // inferred from direct assay /// 0006102 // isocitrate metabolic process // inferred from electronic annotation /// 0006103 // 2-oxoglutarate metabolic process // inferred from direct assay /// 0006103 // 2-oxoglutarate metabolic process // traceable author statement /// 0006740 // NADPH regeneration // traceable author statement /// 0006749 // glutathione metabolic process // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005777 // peroxisome // inferred from direct assay /// 0005777 // peroxisome // inferred from electronic annotation /// 0005782 // peroxisomal matrix // traceable author statement /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation","0000287 // magnesium ion binding // inferred from direct assay /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0004450 // isocitrate dehydrogenase (NADP+) activity // not recorded /// 0004450 // isocitrate dehydrogenase (NADP+) activity // inferred from direct assay /// 0004450 // isocitrate dehydrogenase (NADP+) activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from physical interaction /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016616 // oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051287 // NAD binding // inferred from electronic annotation","chr2:209100952-209120522 (-) // 92.68 // q34"]
["11745815_x_at",0.11654425,0.030059814,0.04828024,-0.17852306,-0.030059814,-0.0987072,0.2956209,0.029217688,1.1230261,0.1673915,1.1230261,"up","C16orf5",29965.0,"0006915 // apoptotic process // inferred from genetic interaction /// 0006917 // induction of apoptosis // inferred from direct assay /// 0033209 // tumor necrosis factor-mediated signaling pathway // inferred from genetic interaction /// 0042771 // DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement","","chr16:4560706-4565107 (-) // 95.22 // p13.3"]
["11717432_a_at",0.03782177,-0.05070877,0.043234825,-0.03782177,0.09196091,-0.09642506,0.9012603,0.7221647,1.0169235,0.02421122,1.0169235,"up","ECHDC1",55862.0,"0008152 // metabolic process // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004492 // methylmalonyl-CoA decarboxylase activity // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0016831 // carboxy-lyase activity // inferred from sequence or structural similarity /// 0016831 // carboxy-lyase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation","chr6:127609856-127665037 (-) // 98.5 // q22.33"]
["11720731_a_at",-0.003080368,-0.0033578873,-0.03310871,0.003080368,0.03429699,0.09025478,0.4781662,0.11152024,-1.0393823,-0.05572645,1.0393823,"down","SUMF1",285362.0,"0055114 // oxidation-reduction process // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // inferred from electronic annotation","0016491 // oxidoreductase activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:4402829-4508954 (-) // 90.13 // p26.1"]
["11741989_a_at",-0.16058016,0.07990551,-0.14622831,0.07326889,-0.008635998,0.008635998,0.6616782,0.28824744,-1.071816,-0.100057214,1.071816,"down","P2RX2",22953.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // not recorded /// 0010524 // positive regulation of calcium ion transport into cytosol // non-traceable author statement /// 0035590 // purinergic nucleotide receptor signaling pathway // not recorded /// 0035590 // purinergic nucleotide receptor signaling pathway // non-traceable author statement /// 0050850 // positive regulation of calcium-mediated signaling // non-traceable author statement /// 0051260 // protein homooligomerization // inferred from physical interaction","0016020 // membrane // not recorded /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0001614 // purinergic nucleotide receptor activity // not recorded /// 0001614 // purinergic nucleotide receptor activity // non-traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0004931 // extracellular ATP-gated cation channel activity // not recorded /// 0004931 // extracellular ATP-gated cation channel activity // non-traceable author statement /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005524 // ATP binding // non-traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0015276 // ligand-gated ion channel activity // traceable author statement /// 0042802 // identical protein binding // inferred from physical interaction","chr12:133195402-133198972 (+) // 96.32 // q24.33"]
["11741321_a_at",-0.16522217,0.03494358,-0.0074386597,0.051144123,0.0074386597,-0.04019308,0.78703237,0.47682616,-1.0367267,-0.05203564,1.0367267,"down","CREM",1390.0,"0006006 // glucose metabolic process // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006687 // glycosphingolipid metabolic process // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0042752 // regulation of circadian rhythm // inferred from electronic annotation /// 0048384 // retinoic acid receptor signaling pathway // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008140 // cAMP response element binding protein binding // non-traceable author statement /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation","chr10:35484829-35501885 (+) // 99.52 // p11.21"]
["11753889_a_at",-0.10781956,0.023635387,-0.12890911,-0.02363491,0.15529871,0.1359744,0.45296493,0.096645355,-1.117476,-0.16024382,1.117476,"down","STAT6",6778.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0002296 // T-helper 1 cell lineage commitment // inferred from electronic annotation /// 0002829 // negative regulation of type 2 immune response // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // inferred from electronic annotation /// 0034097 // response to cytokine stimulus // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048295 // positive regulation of isotype switching to IgE isotypes // inferred from electronic annotation","0000790 // nuclear chromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr12:57501945-57502061 (-) // 99.15 // q13.3"]
["11735141_at",0.08525157,0.016988277,-0.06611776,-0.016988277,0.08032274,-0.090200186,0.9206134,0.7662795,1.0146596,0.020995872,1.0146596,"up","SORCS3",22986.0,"0007218 // neuropeptide signaling pathway // non-traceable author statement /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0008188 // neuropeptide receptor activity // non-traceable author statement","chr10:106400858-107024999 (+) // 99.71 // q25.1"]
["11756090_s_at",-0.025318146,-0.04738903,0.05653,0.047839165,-0.05298567,0.025318146,0.9319337,0.79650664,-1.0084337,-0.012116236,1.0084337,"down","ZHX1",11244.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003714 // transcription corepressor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from direct assay","chr14:63763014-63764134 (+) // 49.18 // q23.2"]
["11740919_a_at",-0.09545803,0.22217703,0.0046494007,-0.004649639,-0.027380943,0.012693405,0.85790783,0.623068,1.0354337,0.050235108,1.0354337,"up","RSPO1",284654.0,"0002090 // regulation of receptor internalization // inferred from direct assay /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0030177 // positive regulation of Wnt receptor signaling pathway // inferred from direct assay /// 0050896 // response to stimulus // inferred from electronic annotation /// 0060070 // canonical Wnt receptor signaling pathway // inferred from electronic annotation /// 0090263 // positive regulation of canonical Wnt receptor signaling pathway // inferred from direct assay","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0005102 // receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008201 // heparin binding // inferred from electronic annotation","chr1:38076950-38100491 (-) // 84.99 // p34.3"]
["11730501_a_at",-0.16608906,-0.40059376,-0.14051151,0.34438944,0.14051151,0.24362564,0.1900797,0.009222892,-1.3933654,-0.47857362,1.3933654,"down","CACNA2D3",55799.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0051925 // regulation of calcium ion transport via voltage-gated calcium channel activity // inferred from electronic annotation /// 0070588 // calcium ion transmembrane transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005245 // voltage-gated calcium channel activity // inferred from electronic annotation /// 0005262 // calcium channel activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:54156650-55108582 (+) // 97.56 // p21.1"]
["11743248_at",-0.044264317,0.044264317,-0.068455696,0.17692375,-0.0523448,0.04931116,0.7000338,0.34007514,-1.0575911,-0.080781914,1.0575911,"down","ONECUT3",390874.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0031018 // endocrine pancreas development // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr19:1753661-1775602 (+) // 63.32 // p13.3"]
["11761537_at",0.012387514,-0.029914856,-0.012387276,0.019828796,-0.1253097,0.14772987,0.92548126,0.7781597,-1.0168132,-0.024054606,1.0168132,"down","TM2D3",80213.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr15:102173275-102192579 (-) // 53.12 // q26.3"]
["11745685_a_at",-0.09005928,0.16045809,-0.0326581,0.12016249,-0.0761714,0.0326581,0.96650976,0.89767486,-1.0090303,-0.012969557,1.0090303,"down","SCLT1",132320.0,"0045162 // clustering of voltage-gated sodium channels // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0045111 // intermediate filament cytoskeleton // inferred from direct assay","0017080 // sodium channel regulator activity // inferred from electronic annotation","chr4:129805500-130014567 (-) // 99.93 // q28.2"]
["11764008_at",-0.05938983,0.095107555,-0.043729782,0.043729782,0.22706318,-0.11993289,0.87488365,0.6598765,-1.0373893,-0.052957363,1.0373893,"down","","","","","","chr9:121450030-121468238 (-) // 43.26 // q33.1"]
["11731749_at",-0.014981747,-0.0056242943,-0.0057091713,0.07135439,0.0056242943,0.087165356,0.39669,0.06511515,-1.044988,-0.06348643,1.044988,"down","SNX32",254122.0,"0006810 // transport // inferred from electronic annotation /// 0007154 // cell communication // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","","0035091 // phosphatidylinositol binding // inferred from electronic annotation","chr11:65601409-65621172 (+) // 95.15 // q13.1"]
["11719543_a_at",-0.06602001,-0.059154034,0.2038331,-0.10068083,0.29447126,0.059154034,0.8959804,0.7093836,-1.0410903,-0.05809514,1.0410903,"down","C3orf18",51161.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr3:50595461-50605199 (-) // 95.98 // p21.31"]
["11756854_a_at",0.045489788,0.007349968,-0.05076456,-0.01063776,-0.007349968,0.009802818,0.97181576,0.9108696,1.0023735,0.0034201173,1.0023735,"up","EHBP1",23301.0,"","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","","chr2:63192096-63272798 (+) // 100.0 // p15"]
["11749575_at",0.018225193,-0.026608944,-0.037335873,0.060078144,4.1484833E-5,-4.1484833E-5,0.63149387,0.25072142,-1.0247457,-0.03526594,1.0247457,"down","LOC100287329",1.00287329E8,"","","","chr6:31527069-31540480 (-) // 96.53 // p21.33"]
["11717457_a_at",0.026520729,0.011678696,0.11269665,-0.11064291,-0.011678696,-0.09039545,0.3599548,0.049893375,1.0876424,0.12120434,1.0876424,"up","NLGN2",57555.0,"0007155 // cell adhesion // inferred from electronic annotation /// 0007158 // neuron cell-cell adhesion // inferred from sequence or structural similarity /// 0007416 // synapse assembly // not recorded /// 0007416 // synapse assembly // inferred from sequence or structural similarity /// 0007416 // synapse assembly // non-traceable author statement /// 0016337 // cell-cell adhesion // non-traceable author statement /// 0032230 // positive regulation of synaptic transmission, GABAergic // inferred from sequence or structural similarity /// 0035418 // protein localization to synapse // inferred from sequence or structural similarity /// 0045217 // cell-cell junction maintenance // non-traceable author statement /// 0051965 // positive regulation of synapse assembly // inferred from sequence or structural similarity /// 0051968 // positive regulation of synaptic transmission, glutamatergic // inferred from sequence or structural similarity /// 0072553 // terminal button organization // inferred from sequence or structural similarity /// 0097104 // postsynaptic membrane assembly // inferred from sequence or structural similarity /// 0097105 // presynaptic membrane assembly // inferred from sequence or structural similarity /// 0097116 // gephyrin clustering // inferred from sequence or structural similarity /// 0097119 // postsynaptic density protein 95 clustering // inferred from sequence or structural similarity /// 0097151 // positive regulation of inhibitory postsynaptic membrane potential // inferred from sequence or structural similarity /// 2000311 // regulation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor activity // inferred from sequence or structural similarity /// 2000463 // positive regulation of excitatory postsynaptic membrane potential // inferred from sequence or structural similarity","0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // not recorded /// 0005887 // integral to plasma membrane // inferred from sequence or structural similarity /// 0009986 // cell surface // not recorded /// 0009986 // cell surface // inferred from sequence or structural similarity /// 0016020 // membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0042734 // presynaptic membrane // inferred from electronic annotation /// 0045202 // synapse // not recorded /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // non-traceable author statement /// 0045211 // postsynaptic membrane // inferred from electronic annotation /// 0060077 // inhibitory synapse // inferred from sequence or structural similarity","0004091 // carboxylesterase activity // not recorded /// 0004872 // receptor activity // not recorded /// 0042043 // neurexin family protein binding // not recorded /// 0042043 // neurexin family protein binding // inferred from sequence or structural similarity /// 0042043 // neurexin family protein binding // non-traceable author statement /// 0050839 // cell adhesion molecule binding // inferred from sequence or structural similarity","chr17:7311501-7323179 (+) // 94.41 // p13.1"]
["11735338_at",0.15464497,0.033566475,0.029859543,-0.14724207,-0.029859543,-0.09979868,0.3215142,0.036411587,1.1211586,0.16499038,1.1211586,"up","LINC00482",284185.0,"","","","chr17:79276623-79283053 (-) // 77.12 // q25.3"]
["11716992_at",-0.12160158,0.020996094,-0.056282997,0.043735027,-0.016510963,0.016510963,0.5951043,0.20931736,-1.047445,-0.06687457,1.047445,"down","CIC",23152.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr19:42788816-42799948 (+) // 95.51 // q13.2"]
["11738637_a_at",0.0046253204,0.0014572144,0.06785011,-0.0014572144,-0.01020813,-0.039901733,0.5471335,0.16363207,1.0294211,0.041833244,1.0294211,"up","CTBP1",1487.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0019079 // viral genome replication // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0031065 // positive regulation of histone deacetylation // inferred from mutant phenotype /// 0034401 // regulation of transcription by chromatin organization // inferred from mutant phenotype /// 0035067 // negative regulation of histone acetylation // inferred from mutant phenotype /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0050872 // white fat cell differentiation // inferred from sequence or structural similarity /// 0050872 // white fat cell differentiation // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from mutant phenotype /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0090241 // negative regulation of histone H4 acetylation // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0017053 // transcriptional repressor complex // inferred from direct assay /// 0017053 // transcriptional repressor complex // inferred from sequence or structural similarity /// 0017053 // transcriptional repressor complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0001106 // RNA polymerase II transcription corepressor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // traceable author statement /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016616 // oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0048037 // cofactor binding // inferred from electronic annotation /// 0051287 // NAD binding // inferred from sequence or structural similarity /// 0051287 // NAD binding // inferred from electronic annotation","chr4:1205232-1242914 (-) // 90.98 // p16.3"]
["11720930_s_at",0.017562866,0.03255558,0.19175148,-0.16501331,-0.14367485,-0.017562866,0.38219228,0.05877511,1.1402686,0.18937366,1.1402686,"up","DLST",1743.0,"0006091 // generation of precursor metabolites and energy // traceable author statement /// 0006099 // tricarboxylic acid cycle // traceable author statement /// 0006099 // tricarboxylic acid cycle // inferred from electronic annotation /// 0006103 // 2-oxoglutarate metabolic process // inferred from electronic annotation /// 0006554 // lysine catabolic process // traceable author statement /// 0006734 // NADH metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0033512 // L-lysine catabolic process to acetyl-CoA via saccharopine // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement /// 0005792 // microsome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0045252 // oxoglutarate dehydrogenase complex // inferred from electronic annotation","0004149 // dihydrolipoyllysine-residue succinyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0031072 // heat shock protein binding // inferred from electronic annotation /// 0051087 // chaperone binding // inferred from electronic annotation","chr14:75348595-75370443 (+) // 98.64 // q24.3"]
["11723309_at",-0.024950981,0.06419611,0.024950981,-0.08185768,-0.05649376,0.065041065,0.7586157,0.4291527,1.0322808,0.04583547,1.0322808,"up","TNFRSF10D",8793.0,"0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // traceable author statement /// 0007165 // signal transduction // traceable author statement","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // traceable author statement /// 0045569 // TRAIL binding // inferred from electronic annotation","chr8:22993100-23021543 (-) // 89.17 // p21.3"]
["11733872_x_at",0.003791809,-0.003791809,0.03022194,-0.041884422,0.049660683,-0.03140068,0.84276426,0.59027094,1.0125189,0.017948814,1.0125189,"up","LOC100652805 /// LOC100653302 /// PGK1","100652805 /// 100653302 /// 5230","0005975 // carbohydrate metabolic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006094 // gluconeogenesis // traceable author statement /// 0006096 // glycolysis // inferred from electronic annotation /// 0006096 // glycolysis // traceable author statement /// 0016310 // phosphorylation // inferred from sequence or structural similarity /// 0016310 // phosphorylation // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0004618 // phosphoglycerate kinase activity // not recorded /// 0004618 // phosphoglycerate kinase activity // inferred from sequence or structural similarity /// 0004618 // phosphoglycerate kinase activity // inferred from electronic annotation /// 0004618 // phosphoglycerate kinase activity // traceable author statement /// 0005524 // ATP binding // inferred from sequence or structural similarity /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chrX:77359665-77382323 (+) // 82.0 // q21.1"]
["11752991_at",0.076215506,-0.28117776,0.014304638,0.1869297,-0.018277645,-0.014304876,0.7558591,0.4244317,-1.0829762,-0.11500157,1.0829762,"down","HSP90B3P",343477.0,"0006457 // protein folding // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation","","0005524 // ATP binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // inferred from electronic annotation","chr1:92100567-92109335 (+) // 94.13 // p22.1"]
["11758326_s_at",-0.012855053,-0.06740284,0.007153034,0.04360819,0.048628807,-0.007153511,0.51643854,0.13824248,-1.0372254,-0.052729394,1.0372254,"down","THEM4",117145.0,"0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","","chr1:151849535-151881964 (-) // 98.49 // q21.3 /// chr15:55734929-55735594 (-) // 94.86 // q21.3"]
["11724297_a_at",-0.019816875,0.019816875,-0.12107563,0.122677326,0.027113914,-0.027377129,0.63262814,0.2520738,-1.0578706,-0.0811632,1.0578706,"down","BMP7",655.0,"0001501 // skeletal system development // traceable author statement /// 0001503 // ossification // inferred from electronic annotation /// 0001654 // eye development // inferred from electronic annotation /// 0001656 // metanephros development // inferred from expression pattern /// 0001657 // ureteric bud development // inferred from sequence or structural similarity /// 0001657 // ureteric bud development // inferred from electronic annotation /// 0001707 // mesoderm formation // inferred from electronic annotation /// 0001822 // kidney development // inferred from electronic annotation /// 0001823 // mesonephros development // inferred from expression pattern /// 0001837 // epithelial to mesenchymal transition // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007389 // pattern specification process // inferred from electronic annotation /// 0007411 // axon guidance // inferred from electronic annotation /// 0007435 // salivary gland morphogenesis // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0009880 // embryonic pattern specification // inferred from electronic annotation /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0010664 // negative regulation of striated muscle cell apoptotic process // inferred from sequence or structural similarity /// 0010800 // positive regulation of peptidyl-threonine phosphorylation // inferred from direct assay /// 0010862 // positive regulation of pathway-restricted SMAD protein phosphorylation // inferred from direct assay /// 0010862 // positive regulation of pathway-restricted SMAD protein phosphorylation // traceable author statement /// 0010942 // positive regulation of cell death // inferred from electronic annotation /// 0016358 // dendrite development // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030326 // embryonic limb morphogenesis // inferred from electronic annotation /// 0030501 // positive regulation of bone mineralization // inferred from direct assay /// 0030509 // BMP signaling pathway // inferred from direct assay /// 0030509 // BMP signaling pathway // inferred from electronic annotation /// 0030855 // epithelial cell differentiation // inferred from electronic annotation /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from sequence or structural similarity /// 0034116 // positive regulation of heterotypic cell-cell adhesion // inferred from direct assay /// 0034504 // protein localization to nucleus // inferred from direct assay /// 0035239 // tube morphogenesis // inferred from electronic annotation /// 0040007 // growth // inferred from electronic annotation /// 0042326 // negative regulation of phosphorylation // inferred from direct assay /// 0042347 // negative regulation of NF-kappaB import into nucleus // inferred from sequence or structural similarity /// 0042475 // odontogenesis of dentin-containing tooth // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043401 // steroid hormone mediated signaling pathway // inferred from mutant phenotype /// 0043407 // negative regulation of MAP kinase activity // inferred from direct assay /// 0045597 // positive regulation of cell differentiation // inferred from electronic annotation /// 0045665 // negative regulation of neuron differentiation // inferred from direct assay /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from electronic annotation /// 0045669 // positive regulation of osteoblast differentiation // inferred from direct assay /// 0045746 // negative regulation of Notch signaling pathway // inferred from electronic annotation /// 0045786 // negative regulation of cell cycle // inferred from direct assay /// 0045839 // negative regulation of mitosis // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0048468 // cell development // inferred from electronic annotation /// 0048593 // camera-type eye morphogenesis // inferred from electronic annotation /// 0048596 // embryonic camera-type eye morphogenesis // inferred from electronic annotation /// 0048646 // anatomical structure formation involved in morphogenesis // inferred from electronic annotation /// 0048754 // branching morphogenesis of a tube // inferred from electronic annotation /// 0048762 // mesenchymal cell differentiation // inferred from direct assay /// 0048812 // neuron projection morphogenesis // inferred from direct assay /// 0048812 // neuron projection morphogenesis // inferred from electronic annotation /// 0050768 // negative regulation of neurogenesis // inferred from electronic annotation /// 0051216 // cartilage development // inferred from electronic annotation /// 0060272 // embryonic skeletal joint morphogenesis // inferred from electronic annotation /// 0060389 // pathway-restricted SMAD protein phosphorylation // inferred from direct assay /// 0060395 // SMAD protein signal transduction // inferred from direct assay /// 0060445 // branching involved in salivary gland morphogenesis // inferred from electronic annotation /// 0060485 // mesenchyme development // inferred from sequence or structural similarity /// 0060485 // mesenchyme development // inferred from electronic annotation /// 0060548 // negative regulation of cell death // inferred from direct assay /// 0060686 // negative regulation of prostatic bud formation // inferred from electronic annotation /// 0060687 // regulation of branching involved in prostate gland morphogenesis // inferred from electronic annotation /// 0070487 // monocyte aggregation // inferred from direct assay /// 0071456 // cellular response to hypoxia // inferred from sequence or structural similarity /// 0072040 // negative regulation of mesenchymal stem cell apoptotic process involved in nephron morphogenesis // inferred from electronic annotation /// 0072125 // negative regulation of glomerular mesangial cell proliferation // inferred from direct assay /// 0072133 // metanephric mesenchyme morphogenesis // inferred from electronic annotation /// 0072134 // nephrogenic mesenchyme morphogenesis // inferred from electronic annotation /// 0072136 // metanephric mesenchymal cell proliferation involved in metanephros development // inferred from electronic annotation /// 1900006 // positive regulation of dendrite development // inferred from direct assay /// 1900106 // positive regulation of hyaluranon cable assembly // inferred from direct assay /// 2000121 // regulation of removal of superoxide radicals // inferred from sequence or structural similarity","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation","0005125 // cytokine activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // inferred from electronic annotation","chr20:55743808-55841708 (-) // 89.56 // q13.31"]
["11721212_a_at",-0.040066957,0.19513059,-0.0025205612,-0.14766288,0.03691125,0.0025205612,0.7396456,0.3999881,1.0621037,0.086924694,1.0621037,"up","THBS4",7060.0,"0001938 // positive regulation of endothelial cell proliferation // inferred from direct assay /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0016525 // negative regulation of angiogenesis // inferred from expression pattern /// 0048812 // neuron projection morphogenesis // inferred from electronic annotation /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0051260 // protein homooligomerization // inferred from electronic annotation /// 0051451 // myoblast migration // inferred from direct assay /// 0051781 // positive regulation of cell division // inferred from electronic annotation /// 0071603 // endothelial cell-cell adhesion // inferred from direct assay /// 0090023 // positive regulation of neutrophil chemotaxis // inferred from direct assay","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005604 // basement membrane // inferred from direct assay /// 0005615 // extracellular space // inferred from direct assay /// 0031594 // neuromuscular junction // inferred from electronic annotation","0001968 // fibronectin binding // inferred from electronic annotation /// 0005178 // integrin binding // inferred from direct assay /// 0005509 // calcium ion binding // inferred from direct assay /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005518 // collagen binding // inferred from electronic annotation /// 0008083 // growth factor activity // inferred from electronic annotation /// 0008201 // heparin binding // inferred from direct assay /// 0043237 // laminin-1 binding // inferred from electronic annotation","chr5:79330990-79379110 (+) // 98.43 // q14.1"]
["11735472_a_at",-0.028799772,-0.101579666,-0.21325469,0.0837965,0.13608932,0.028799534,0.31112915,0.03329545,-1.1466618,-0.19743988,1.1466618,"down","CCDC169 /// CCDC169-SOHLH2 /// SOHLH2","100526761 /// 54937 /// 728591","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0048477 // oogenesis // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation","chr13:36804911-36871992 (-) // 100.0 // q13.3"]
["11715686_s_at",0.013420105,-0.040920258,-0.061803818,0.02968502,-0.013420105,0.10106754,0.5457615,0.16190544,-1.0489012,-0.06887879,1.0489012,"down","ARPC5",10092.0,"0006928 // cellular component movement // traceable author statement /// 0030036 // actin cytoskeleton organization // traceable author statement /// 0030833 // regulation of actin filament polymerization // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005885 // Arp2/3 protein complex // traceable author statement /// 0015629 // actin cytoskeleton // traceable author statement /// 0042995 // cell projection // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0005200 // structural constituent of cytoskeleton // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr1:183595327-183605076 (-) // 91.38 // q25.3"]
["11753825_x_at",0.023226738,0.024506569,0.18201065,-0.05738449,-0.06547451,-0.023226738,0.42884532,0.082225055,1.0907168,0.12527661,1.0907168,"up","FKBP1A",2280.0,"0000413 // protein peptidyl-prolyl isomerization // inferred from direct assay /// 0000413 // protein peptidyl-prolyl isomerization // traceable author statement /// 0000413 // protein peptidyl-prolyl isomerization // inferred from electronic annotation /// 0003007 // heart morphogenesis // inferred from sequence or structural similarity /// 0006457 // protein folding // inferred from electronic annotation /// 0006457 // protein folding // non-traceable author statement /// 0006458 // 'de novo' protein folding // traceable author statement /// 0007165 // signal transduction // inferred from mutant phenotype /// 0007183 // SMAD protein complex assembly // inferred from direct assay /// 0018208 // peptidyl-proline modification // not recorded /// 0022417 // protein maturation by protein folding // traceable author statement /// 0031398 // positive regulation of protein ubiquitination // inferred from direct assay /// 0032092 // positive regulation of protein binding // inferred from direct assay /// 0032513 // negative regulation of protein phosphatase type 2B activity // inferred from direct assay /// 0032925 // regulation of activin receptor signaling pathway // inferred from direct assay /// 0034205 // beta-amyloid formation // inferred from direct assay /// 0042026 // protein refolding // traceable author statement /// 0042110 // T cell activation // non-traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from mutant phenotype /// 0043206 // fibril organization // inferred from direct assay /// 0050776 // regulation of immune response // inferred from mutant phenotype /// 0055010 // ventricular cardiac muscle tissue morphogenesis // inferred from sequence or structural similarity /// 0060314 // regulation of ryanodine-sensitive calcium-release channel activity // inferred from direct assay /// 0060314 // regulation of ryanodine-sensitive calcium-release channel activity // inferred from sequence or structural similarity /// 0060347 // heart trabecula formation // inferred from sequence or structural similarity","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0014802 // terminal cisterna // inferred from sequence or structural similarity /// 0030424 // axon // not recorded /// 0033017 // sarcoplasmic reticulum membrane // not recorded","0003755 // peptidyl-prolyl cis-trans isomerase activity // inferred from direct assay /// 0003755 // peptidyl-prolyl cis-trans isomerase activity // inferred from electronic annotation /// 0003755 // peptidyl-prolyl cis-trans isomerase activity // traceable author statement /// 0004871 // signal transducer activity // inferred from mutant phenotype /// 0005024 // transforming growth factor beta-activated receptor activity // traceable author statement /// 0005160 // transforming growth factor beta receptor binding // inferred from sequence or structural similarity /// 0005219 // ryanodine-sensitive calcium-release channel activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005527 // macrolide binding // non-traceable author statement /// 0005528 // FK506 binding // inferred from direct assay /// 0005528 // FK506 binding // non-traceable author statement /// 0016853 // isomerase activity // inferred from electronic annotation /// 0034713 // type I transforming growth factor beta receptor binding // inferred from sequence or structural similarity /// 0046332 // SMAD binding // inferred from physical interaction /// 0048185 // activin binding // inferred from physical interaction","chr6:63921461-63921788 (+) // 99.28 // q12 /// chr20:1352755-1373642 (-) // 100.0 // p13"]
["11728376_s_at",-0.025905132,-0.03515625,9.775162E-6,0.10674429,-1.001358E-5,0.2728703,0.5194605,0.14056304,-1.1071767,-0.14688544,1.1071767,"down","NMU",10874.0,"0001696 // gastric acid secretion // inferred from electronic annotation /// 0006940 // regulation of smooth muscle contraction // traceable author statement /// 0006940 // regulation of smooth muscle contraction // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007218 // neuropeptide signaling pathway // inferred from electronic annotation /// 0007586 // digestion // traceable author statement /// 0009648 // photoperiodism // inferred from electronic annotation /// 0019233 // sensory perception of pain // inferred from electronic annotation /// 0042755 // eating behavior // inferred from electronic annotation /// 0045987 // positive regulation of smooth muscle contraction // inferred from electronic annotation /// 0046887 // positive regulation of hormone secretion // inferred from electronic annotation /// 0050806 // positive regulation of synaptic transmission // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0043195 // terminal button // inferred from electronic annotation","0005102 // receptor binding // traceable author statement /// 0042922 // neuromedin U receptor binding // inferred from electronic annotation","chr4:56461397-56502465 (-) // 93.62 // q12"]
["11717341_at",-0.005552292,-0.05489254,-0.10287571,0.005552292,0.0211792,0.026434898,0.39907488,0.066286586,-1.0512912,-0.072162375,1.0512912,"down","PTGFRN",5738.0,"0034389 // lipid particle organization // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr1:117452572-117532975 (+) // 96.47 // p13.1"]
["11759881_at",-0.053020716,0.16919303,-0.013397217,0.033215523,-0.07038689,0.013397217,0.85050476,0.6058652,1.0296707,0.04218304,1.0296707,"up","PPIA",5478.0,"0000413 // protein peptidyl-prolyl isomerization // inferred from direct assay /// 0000413 // protein peptidyl-prolyl isomerization // inferred from electronic annotation /// 0002576 // platelet degranulation // traceable author statement /// 0006278 // RNA-dependent DNA replication // traceable author statement /// 0006457 // protein folding // inferred from electronic annotation /// 0006457 // protein folding // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0019047 // provirus integration // traceable author statement /// 0019059 // initiation of viral infection // traceable author statement /// 0019061 // uncoating of virus // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0030260 // entry into host cell // traceable author statement /// 0045069 // regulation of viral genome replication // inferred from mutant phenotype /// 0045069 // regulation of viral genome replication // traceable author statement /// 0050900 // leukocyte migration // traceable author statement","0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement","0003755 // peptidyl-prolyl cis-trans isomerase activity // inferred from direct assay /// 0003755 // peptidyl-prolyl cis-trans isomerase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016853 // isomerase activity // inferred from electronic annotation /// 0042277 // peptide binding // inferred from electronic annotation /// 0046790 // virion binding // non-traceable author statement /// 0051082 // unfolded protein binding // traceable author statement","chr11:3913430-3914122 (-) // 75.66 // p15.4"]
["11735609_a_at",-0.04305935,0.07175255,-0.004732847,0.0027990341,-0.0027990341,0.07836819,0.8884772,0.6929345,-1.0126503,-0.018135983,1.0126503,"down","FER1L5",90342.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr2:97308573-97370624 (+) // 99.98 // q11.2"]
["11734876_a_at",0.03434038,0.055050373,-0.07921529,-0.117067814,0.03959012,-0.03434038,0.82179785,0.544962,1.0285875,0.04066447,1.0285875,"up","TMEM30B",161291.0,"0070863 // positive regulation of protein exit from endoplasmic reticulum // inferred from direct assay","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr14:61744087-61748558 (-) // 92.78 // q23.1"]
["11721891_at",0.07506657,0.08220577,-0.016949177,-0.0012254715,0.0012254715,-0.0069589615,0.5859575,0.19999807,1.034615,0.04909407,1.034615,"up","LPHN1",22859.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007218 // neuropeptide signaling pathway // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0015643 // toxin binding // inferred from electronic annotation /// 0016524 // latrotoxin receptor activity // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr19:14258548-14316999 (-) // 97.96 // p13.12"]
["11731997_at",0.003970146,-0.05749035,-0.14399338,0.049155712,0.1712513,-0.003970146,0.47484955,0.109747514,-1.100366,-0.13798346,1.100366,"down","TRIM58",25893.0,"","0005622 // intracellular // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:248020471-248042611 (+) // 61.22 // q44"]
["11725741_x_at",-0.014678478,0.014678478,-0.1308937,0.13229084,0.038967133,-0.05848694,0.68224895,0.3150986,-1.0579134,-0.081221566,1.0579134,"down","SMPDL3B",27293.0,"0006685 // sphingomyelin catabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation","0004767 // sphingomyelin phosphodiesterase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity, acting on glycosyl bonds // inferred from electronic annotation","chr1:28261466-28285663 (+) // 94.1 // p35.3"]
["11751294_a_at",0.11787629,-0.10802293,0.09592819,0.02326417,-0.23457813,-0.02326417,0.70698994,0.34912208,1.0818145,0.11345317,1.0818145,"up","ST6GALNAC5",81849.0,"0006486 // protein glycosylation // inferred from electronic annotation /// 0006688 // glycosphingolipid biosynthetic process // inferred from sequence or structural similarity /// 0006688 // glycosphingolipid biosynthetic process // inferred from electronic annotation /// 0009312 // oligosaccharide biosynthetic process // inferred from sequence or structural similarity /// 0009312 // oligosaccharide biosynthetic process // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030173 // integral to Golgi membrane // inferred from electronic annotation","0001665 // alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase activity // inferred from sequence or structural similarity /// 0001665 // alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase activity // inferred from electronic annotation /// 0008373 // sialyltransferase activity // inferred from sequence or structural similarity /// 0008373 // sialyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation","chr1:77333170-77529522 (+) // 81.07 // p31.1"]
["11717275_s_at",-0.10667133,-0.13643837,-0.027294159,0.027294159,0.058796883,0.07301903,0.2347329,0.01534985,-1.10433,-0.14317127,1.10433,"down","COL5A1",1289.0,"0001568 // blood vessel development // inferred from electronic annotation /// 0003007 // heart morphogenesis // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from mutant phenotype /// 0007411 // axon guidance // traceable author statement /// 0016477 // cell migration // inferred from mutant phenotype /// 0030199 // collagen fibril organization // inferred from mutant phenotype /// 0030199 // collagen fibril organization // non-traceable author statement /// 0030199 // collagen fibril organization // inferred from electronic annotation /// 0032964 // collagen biosynthetic process // inferred from mutant phenotype /// 0035313 // wound healing, spreading of epidermal cells // inferred from mutant phenotype /// 0043206 // fibril organization // inferred from mutant phenotype /// 0043588 // skin development // inferred from mutant phenotype /// 0043588 // skin development // inferred from electronic annotation /// 0045112 // integrin biosynthetic process // inferred from mutant phenotype /// 0048592 // eye morphogenesis // inferred from mutant phenotype /// 0051128 // regulation of cellular component organization // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005581 // collagen // inferred from electronic annotation /// 0005588 // collagen type V // inferred from mutant phenotype /// 0005588 // collagen type V // traceable author statement /// 0005604 // basement membrane // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from mutant phenotype /// 0031012 // extracellular matrix // inferred from electronic annotation","0005178 // integrin binding // non-traceable author statement /// 0005201 // extracellular matrix structural constituent // inferred from electronic annotation /// 0008201 // heparin binding // inferred from direct assay /// 0008201 // heparin binding // inferred from electronic annotation /// 0043394 // proteoglycan binding // inferred from physical interaction /// 0048407 // platelet-derived growth factor binding // inferred from direct assay","chr9:137533565-137736689 (+) // 98.38 // q34.3"]
["11739947_a_at",-0.056259632,-0.029193878,0.029193878,-0.104081154,0.082066536,0.07895613,0.84805954,0.60077155,-1.0265001,-0.037733775,1.0265001,"down","PFKFB2",5208.0,"0005975 // carbohydrate metabolic process // traceable author statement /// 0006000 // fructose metabolic process // traceable author statement /// 0006000 // fructose metabolic process // inferred from electronic annotation /// 0006003 // fructose 2,6-bisphosphate metabolic process // inferred from electronic annotation /// 0006006 // glucose metabolic process // traceable author statement /// 0006007 // glucose catabolic process // inferred from electronic annotation /// 0006089 // lactate metabolic process // inferred from electronic annotation /// 0006090 // pyruvate metabolic process // inferred from electronic annotation /// 0006096 // glycolysis // inferred from direct assay /// 0006096 // glycolysis // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0009749 // response to glucose stimulus // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0032024 // positive regulation of insulin secretion // inferred from electronic annotation /// 0033133 // positive regulation of glucokinase activity // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0003873 // 6-phosphofructo-2-kinase activity // inferred from direct assay /// 0003873 // 6-phosphofructo-2-kinase activity // inferred from electronic annotation /// 0003873 // 6-phosphofructo-2-kinase activity // traceable author statement /// 0004331 // fructose-2,6-bisphosphate 2-phosphatase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0019900 // kinase binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction","chr1:207226592-207254369 (+) // 99.21 // q32.2"]
["11752129_a_at",0.029220581,-0.04752159,0.09355259,-0.01187706,-0.08079243,0.01187706,0.7078648,0.35130882,1.0367117,0.05201474,1.0367117,"up","BIVM-ERCC5 /// ERCC5","100533467 /// 2073","0000718 // nucleotide-excision repair, DNA damage removal // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006283 // transcription-coupled nucleotide-excision repair // inferred from mutant phenotype /// 0006283 // transcription-coupled nucleotide-excision repair // traceable author statement /// 0006289 // nucleotide-excision repair // inferred from electronic annotation /// 0006289 // nucleotide-excision repair // traceable author statement /// 0006295 // nucleotide-excision repair, DNA incision, 3'-to lesion // inferred from direct assay /// 0006295 // nucleotide-excision repair, DNA incision, 3'-to lesion // inferred from mutant phenotype /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0008340 // determination of adult lifespan // inferred from electronic annotation /// 0009411 // response to UV // inferred from direct assay /// 0009411 // response to UV // inferred from mutant phenotype /// 0009411 // response to UV // inferred from electronic annotation /// 0009650 // UV protection // inferred from genetic interaction /// 0009650 // UV protection // inferred from electronic annotation /// 0010225 // response to UV-C // inferred from mutant phenotype /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005675 // holo TFIIH complex // inferred from direct assay /// 0016591 // DNA-directed RNA polymerase II, holoenzyme // inferred from direct assay","0000405 // bubble DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from direct assay /// 0003697 // single-stranded DNA binding // inferred from direct assay /// 0003697 // single-stranded DNA binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004519 // endonuclease activity // inferred from electronic annotation /// 0004519 // endonuclease activity // traceable author statement /// 0004520 // endodeoxyribonuclease activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016788 // hydrolase activity, acting on ester bonds // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from physical interaction","chr13:103498396-103524611 (+) // 97.64 // q33.1"]
["11717129_s_at",-0.0024766922,0.0024766922,0.05354595,-0.0054559708,0.030461311,-0.052825928,0.75072813,0.4176326,1.0189775,0.027122227,1.0189775,"up","SAR1A",56681.0,"0006184 // GTP catabolic process // non-traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006888 // ER to Golgi vesicle-mediated transport // non-traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // non-traceable author statement /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016529 // sarcoplasmic reticulum // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // non-traceable author statement /// 0005525 // GTP binding // inferred from electronic annotation","chr10:71909325-71930279 (-) // 84.52 // q22.1"]
["11740589_s_at",-0.012406349,0.012406349,0.082938194,-0.053556442,0.09713459,-0.022561073,0.9012603,0.72220117,1.0144097,0.02064039,1.0144097,"up","RYK",6259.0,"0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007409 // axonogenesis // inferred from electronic annotation /// 0007411 // axon guidance // inferred from sequence or structural similarity /// 0007411 // axon guidance // inferred from electronic annotation /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0022038 // corpus callosum development // inferred from sequence or structural similarity /// 0022038 // corpus callosum development // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from sequence or structural similarity /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from sequence or structural similarity /// 0031175 // neuron projection development // inferred from electronic annotation /// 0043410 // positive regulation of MAPK cascade // inferred from direct assay /// 0048705 // skeletal system morphogenesis // inferred from electronic annotation /// 0048843 // negative regulation of axon extension involved in axon guidance // inferred from electronic annotation /// 0050919 // negative chemotaxis // inferred from electronic annotation /// 0071679 // commissural neuron axon guidance // inferred from electronic annotation","0005624 // membrane fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from direct assay /// 0005109 // frizzled binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0017147 // Wnt-protein binding // inferred from electronic annotation /// 0042813 // Wnt-activated receptor activity // inferred from electronic annotation","chr3:133875977-133969586 (-) // 92.38 // q22.2"]
["11715690_x_at",-0.014764786,-0.056155205,0.016940117,0.011439323,-0.004155159,0.004155159,0.72052205,0.3705459,-1.0152298,-0.021806352,1.0152298,"down","CD164",8763.0,"0006955 // immune response // traceable author statement /// 0007155 // cell adhesion // inferred from direct assay /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007157 // heterophilic cell-cell adhesion // inferred from direct assay /// 0007162 // negative regulation of cell adhesion // non-traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007275 // multicellular organismal development // traceable author statement /// 0007517 // muscle organ development // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // non-traceable author statement /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0030097 // hemopoiesis // non-traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005764 // lysosome // inferred from direct assay /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr6:109687716-109703978 (-) // 97.26 // q21"]
["11741555_s_at",-0.015557289,-0.015953064,-0.0452919,0.015557289,0.036629677,0.077848434,0.2961546,0.02941131,-1.04895,-0.06894585,1.04895,"down","LIPA /// LOC100507575","100507575 /// 3988","0000902 // cell morphogenesis // inferred from electronic annotation /// 0001816 // cytokine production // inferred from electronic annotation /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from electronic annotation /// 0016042 // lipid catabolic process // inferred from electronic annotation /// 0016125 // sterol metabolic process // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0048771 // tissue remodeling // inferred from electronic annotation /// 0048873 // homeostasis of number of cells within a tissue // inferred from electronic annotation","0005764 // lysosome // inferred from electronic annotation /// 0005764 // lysosome // traceable author statement","0004771 // sterol esterase activity // inferred from direct assay /// 0004771 // sterol esterase activity // inferred from electronic annotation /// 0016298 // lipase activity // inferred from direct assay /// 0016298 // lipase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016788 // hydrolase activity, acting on ester bonds // inferred from electronic annotation","chr10:90973327-91011660 (-) // 97.23 // q23.31"]
["11758631_s_at",-0.12658024,-0.069395304,0.20608735,0.23302865,-0.040738583,0.040738583,0.8479515,0.60059583,-1.0528542,-0.07430564,1.0528542,"down","FOXO4",4303.0,"0000080 // G1 phase of mitotic cell cycle // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from direct assay /// 0007095 // mitotic cell cycle G2/M transition DNA damage checkpoint // not recorded /// 0007095 // mitotic cell cycle G2/M transition DNA damage checkpoint // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007389 // pattern specification process // not recorded /// 0007517 // muscle organ development // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // inferred from direct assay /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0009790 // embryo development // not recorded /// 0009888 // tissue development // not recorded /// 0016525 // negative regulation of angiogenesis // inferred from direct assay /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // not recorded /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0048513 // organ development // not recorded /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // not recorded /// 0051151 // negative regulation of smooth muscle cell differentiation // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // not recorded /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation","0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // not recorded /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // not recorded /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008301 // DNA binding, bending // not recorded /// 0019899 // enzyme binding // inferred from physical interaction /// 0019901 // protein kinase binding // not recorded /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chrX:70321367-70323384 (+) // 98.84 // q13.1"]
["11744193_x_at",-0.042653084,-0.0038814545,0.07331276,0.0038814545,0.02008915,-0.04205036,0.90049994,0.7197983,1.0104183,0.014952667,1.0104183,"up","SUMO1",7341.0,"0006281 // DNA repair // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016925 // protein sumoylation // inferred from direct assay /// 0016925 // protein sumoylation // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0031334 // positive regulation of protein complex assembly // inferred from direct assay /// 0032436 // positive regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0032880 // regulation of protein localization // traceable author statement /// 0043392 // negative regulation of DNA binding // inferred from mutant phenotype /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0060021 // palate development // inferred from sequence or structural similarity /// 0060021 // palate development // inferred from electronic annotation /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060334 // regulation of interferon-gamma-mediated signaling pathway // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005643 // nuclear pore // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016604 // nuclear body // inferred from electronic annotation /// 0016605 // PML body // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0019789 // SUMO ligase activity // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction","chr2:203070904-203103322 (-) // 91.91 // q33.1"]
["11761061_at",0.039155006,-0.0032339096,0.0032339096,0.004699707,-0.09371805,-0.028398514,0.5610121,0.17586216,1.036838,0.052190576,1.036838,"up","UQCRC1",7384.0,"0006119 // oxidative phosphorylation // traceable author statement /// 0006122 // mitochondrial electron transport, ubiquinol to cytochrome c // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0009060 // aerobic respiration // traceable author statement /// 0014823 // response to activity // inferred from electronic annotation /// 0022900 // electron transport chain // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0043279 // response to alkaloid // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // traceable author statement","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005746 // mitochondrial respiratory chain // traceable author statement /// 0005750 // mitochondrial respiratory chain complex III // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0070469 // respiratory chain // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0008121 // ubiquinol-cytochrome-c reductase activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0032403 // protein complex binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:48641403-48647069 (-) // 99.38 // p21.31"]
["11751683_a_at",0.021093845,-0.007927895,0.008747101,0.007927895,-0.093173504,-0.012787819,0.6539622,0.2791011,1.0281011,0.03998212,1.0281011,"up","RAB11A",8766.0,"0000910 // cytokinesis // inferred from mutant phenotype /// 0006184 // GTP catabolic process // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006833 // water transport // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from direct assay /// 0031175 // neuron projection development // inferred from mutant phenotype /// 0048169 // regulation of long-term neuronal synaptic plasticity // inferred from electronic annotation /// 0048227 // plasma membrane to endosome transport // non-traceable author statement /// 0051223 // regulation of protein transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0072659 // protein localization in plasma membrane // inferred from direct assay","0005739 // mitochondrion // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030133 // transport vesicle // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // traceable author statement /// 0032154 // cleavage furrow // inferred from direct assay /// 0032154 // cleavage furrow // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay /// 0055037 // recycling endosome // inferred from electronic annotation /// 0055038 // recycling endosome membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0019905 // syntaxin binding // non-traceable author statement","chr15:66161793-66180585 (+) // 99.8 // q22.31"]
["11738815_at",0.050670624,-0.138031,-0.04510951,0.2557354,-0.15747929,0.045109272,0.80962247,0.5218765,-1.0658062,-0.09194506,1.0658062,"down","EGFR",1956.0,"0000165 // MAPK cascade // non-traceable author statement /// 0000186 // activation of MAPKK activity // non-traceable author statement /// 0000902 // cell morphogenesis // inferred from electronic annotation /// 0001503 // ossification // non-traceable author statement /// 0001892 // embryonic placenta development // inferred from electronic annotation /// 0001942 // hair follicle development // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006950 // response to stress // non-traceable author statement /// 0007165 // signal transduction // inferred from direct assay /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from direct assay /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // inferred from direct assay /// 0007173 // epidermal growth factor receptor signaling pathway // non-traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // inferred from electronic annotation /// 0007202 // activation of phospholipase C activity // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007435 // salivary gland morphogenesis // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008544 // epidermis development // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016337 // cell-cell adhesion // inferred from mutant phenotype /// 0021795 // cerebral cortex cell migration // inferred from electronic annotation /// 0023014 // signal transduction by phosphorylation // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from mutant phenotype /// 0031659 // positive regulation of cyclin-dependent protein kinase activity involved in G1/S // inferred from direct assay /// 0035413 // positive regulation of catenin import into nucleus // inferred from mutant phenotype /// 0042059 // negative regulation of epidermal growth factor receptor signaling pathway // traceable author statement /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042177 // negative regulation of protein catabolic process // inferred from direct assay /// 0042327 // positive regulation of phosphorylation // inferred from direct assay /// 0043006 // activation of phospholipase A2 activity by calcium-mediated signaling // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043406 // positive regulation of MAP kinase activity // inferred from direct assay /// 0045429 // positive regulation of nitric oxide biosynthetic process // inferred from direct assay /// 0045739 // positive regulation of DNA repair // inferred from direct assay /// 0045740 // positive regulation of DNA replication // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from mutant phenotype /// 0046777 // protein autophosphorylation // inferred from electronic annotation /// 0048146 // positive regulation of fibroblast proliferation // inferred from electronic annotation /// 0048546 // digestive tract morphogenesis // inferred from electronic annotation /// 0050679 // positive regulation of epithelial cell proliferation // inferred from direct assay /// 0050679 // positive regulation of epithelial cell proliferation // inferred from electronic annotation /// 0050730 // regulation of peptidyl-tyrosine phosphorylation // inferred from mutant phenotype /// 0050730 // regulation of peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0050999 // regulation of nitric-oxide synthase activity // inferred from direct assay /// 0051205 // protein insertion into membrane // traceable author statement /// 0051897 // positive regulation of protein kinase B signaling cascade // inferred from mutant phenotype /// 0060571 // morphogenesis of an epithelial fold // inferred from electronic annotation /// 0070141 // response to UV-A // inferred from direct assay","0000139 // Golgi membrane // inferred from electronic annotation /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // non-traceable author statement /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from direct assay /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0030122 // AP-2 adaptor complex // traceable author statement /// 0030139 // endocytic vesicle // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation /// 0045121 // membrane raft // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0070435 // Shc-EGFR complex // inferred from sequence or structural similarity","0000166 // nucleotide binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // non-traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004709 // MAP kinase kinase kinase activity // non-traceable author statement /// 0004713 // protein tyrosine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from mutant phenotype /// 0004713 // protein tyrosine kinase activity // traceable author statement /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // traceable author statement /// 0004716 // receptor signaling protein tyrosine kinase activity // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from direct assay /// 0005006 // epidermal growth factor-activated receptor activity // inferred from direct assay /// 0005006 // epidermal growth factor-activated receptor activity // non-traceable author statement /// 0005006 // epidermal growth factor-activated receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0019903 // protein phosphatase binding // inferred from physical interaction /// 0030235 // nitric-oxide synthase regulator activity // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from direct assay /// 0051015 // actin filament binding // inferred from direct assay","chr7:55086724-55238738 (+) // 96.65 // p11.2"]
["11753382_a_at",-0.05091858,-0.18881369,0.05091858,0.1281004,-0.071149826,0.08712959,0.66750073,0.29550242,-1.0799501,-0.11096464,1.0799501,"down","ZC4H2",55906.0,"","","0046872 // metal ion binding // inferred from electronic annotation","chrX:64137300-64196330 (-) // 100.0 // q11.2"]
["11732621_a_at",0.011678696,0.011868477,-0.1921649,-0.15208912,-0.011678696,0.056132317,0.9456627,0.83515406,-1.0141896,-0.020327387,1.0141896,"down","CRB3",92359.0,"0034329 // cell junction assembly // traceable author statement /// 0045216 // cell-cell junction organization // traceable author statement /// 0070830 // tight junction assembly // traceable author statement /// 0072659 // protein localization in plasma membrane // inferred from direct assay","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005923 // tight junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","0017124 // SH3 domain binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from physical interaction","chr19:6464248-6467228 (+) // 96.64 // p13.3"]
["11726910_x_at",0.0055856705,-0.01747036,0.094545364,0.022686958,-0.0055856705,-0.023899078,0.77831334,0.46254456,1.0208844,0.029819503,1.0208844,"up","MRI1",84245.0,"0000096 // sulfur amino acid metabolic process // traceable author statement /// 0006595 // polyamine metabolic process // traceable author statement /// 0008652 // cellular amino acid biosynthetic process // inferred from electronic annotation /// 0009086 // methionine biosynthetic process // inferred from electronic annotation /// 0019509 // L-methionine salvage from methylthioadenosine // not recorded /// 0019509 // L-methionine salvage from methylthioadenosine // inferred from electronic annotation /// 0019509 // L-methionine salvage from methylthioadenosine // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044237 // cellular metabolic process // inferred from electronic annotation /// 0044249 // cellular biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // not recorded /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0042995 // cell projection // inferred from electronic annotation","0016853 // isomerase activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0046523 // S-methyl-5-thioribose-1-phosphate isomerase activity // not recorded /// 0046523 // S-methyl-5-thioribose-1-phosphate isomerase activity // inferred from electronic annotation","chr19:13875361-13885095 (+) // 38.97 // p13.2"]
["11729067_a_at",0.016059399,-0.016059399,-0.2135179,0.13045502,-0.052610874,0.060461998,0.638819,0.25989717,-1.0846839,-0.117274664,1.0846839,"down","PM20D1",148811.0,"0006508 // proteolysis // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","0008233 // peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:205797153-205819270 (-) // 94.85 // q32.1"]
["11735923_x_at",-0.0068850517,0.0068850517,0.18486643,-0.016177654,0.2406869,-0.1229825,0.94534135,0.83415294,1.0194421,0.027779812,1.0194421,"up","AMELY",266.0,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0031214 // biomineral tissue development // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0044420 // extracellular matrix part // inferred by curator","0030345 // structural constituent of tooth enamel // inferred from direct assay","chrY:6733958-6742068 (-) // 100.0 // p11.2"]
["11715838_a_at",-0.058969498,-0.01845169,-0.03681183,0.03434944,0.01845169,0.054865837,0.19090144,0.009349595,-1.0526068,-0.073966645,1.0526068,"down","NEU1",4758.0,"0006665 // sphingolipid metabolic process // traceable author statement /// 0006687 // glycosphingolipid metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement","0005764 // lysosome // traceable author statement /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0030054 // cell junction // inferred from direct assay /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043202 // lysosomal lumen // traceable author statement /// 0043202 // lysosomal lumen // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0004308 // exo-alpha-sialidase activity // traceable author statement /// 0004308 // exo-alpha-sialidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity, acting on glycosyl bonds // inferred from electronic annotation /// 0052794 // exo-alpha-(2->3)-sialidase activity // inferred from electronic annotation /// 0052795 // exo-alpha-(2->6)-sialidase activity // inferred from electronic annotation /// 0052796 // exo-alpha-(2->8)-sialidase activity // inferred from electronic annotation","chr6:31826829-31830709 (-) // 98.05 // p21.33"]
["11724977_a_at",-0.09538174,-0.062624454,-0.19108343,0.10095072,0.062624454,0.13488579,0.18070155,0.0079012755,-1.1613882,-0.21585023,1.1613882,"down","ITGB4",3691.0,"0007154 // cell communication // inferred from electronic annotation /// 0007155 // cell adhesion // non-traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007160 // cell-matrix adhesion // inferred from electronic annotation /// 0007229 // integrin-mediated signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0009611 // response to wounding // inferred from direct assay /// 0031581 // hemidesmosome assembly // inferred from direct assay /// 0031581 // hemidesmosome assembly // traceable author statement /// 0034329 // cell junction assembly // traceable author statement /// 0046847 // filopodium assembly // inferred from electronic annotation /// 0048870 // cell motility // inferred from mutant phenotype","0005604 // basement membrane // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0008305 // integrin complex // inferred from electronic annotation /// 0008305 // integrin complex // traceable author statement /// 0009925 // basal plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030056 // hemidesmosome // inferred from direct assay /// 0030056 // hemidesmosome // inferred from electronic annotation /// 0031252 // cell leading edge // inferred from direct assay","0004872 // receptor activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr17:73720775-73753899 (+) // 97.34 // q25.1"]
["11727630_s_at",-0.11398697,-0.2593801,0.14056993,0.0010371208,0.079274416,-0.0010373592,0.7607859,0.43432826,-1.0747669,-0.10402376,1.0747669,"down","APBA2",321.0,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0035264 // multicellular organism growth // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation","0001540 // beta-amyloid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr15:29131174-29410518 (+) // 97.63 // q13.1"]
["11721492_a_at",0.009602308,0.029659748,-0.009602308,-0.063835144,0.07343769,-0.12035298,0.78247935,0.4695193,1.0329736,0.04680345,1.0329736,"up","ANKRD7",56311.0,"0008584 // male gonad development // traceable author statement","","","chr7:117864158-117882761 (+) // 77.6 // q31.31"]
["11745824_x_at",0.002790451,-0.038752556,-0.1640644,0.030631065,0.0056962967,-0.002790451,0.58913386,0.20259193,-1.0554472,-0.07785443,1.0554472,"down","ACAA1",30.0,"0000038 // very long-chain fatty acid metabolic process // inferred from mutant phenotype /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006635 // fatty acid beta-oxidation // inferred from mutant phenotype /// 0008152 // metabolic process // inferred from electronic annotation /// 0008206 // bile acid metabolic process // inferred from mutant phenotype /// 0033540 // fatty acid beta-oxidation using acyl-CoA oxidase // traceable author statement /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005777 // peroxisome // inferred from direct assay /// 0005777 // peroxisome // inferred from electronic annotation /// 0005782 // peroxisomal matrix // traceable author statement /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0003824 // catalytic activity // inferred from electronic annotation /// 0003988 // acetyl-CoA C-acyltransferase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016401 // palmitoyl-CoA oxidase activity // inferred from mutant phenotype /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0016747 // transferase activity, transferring acyl groups other than amino-acyl groups // inferred from electronic annotation","chr3:38164206-38178628 (-) // 96.78 // p22.2"]
["11753172_a_at",0.027741432,-0.027741432,-0.38157558,0.2612915,0.069542885,-0.06865263,0.6315565,0.2508479,-1.1603707,-0.21458578,1.1603707,"down","GRB7",2886.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0017148 // negative regulation of translation // inferred from sequence or structural similarity /// 0017148 // negative regulation of translation // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0034063 // stress granule assembly // inferred from sequence or structural similarity /// 0034063 // stress granule assembly // inferred from electronic annotation /// 0050900 // leukocyte migration // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0005925 // focal adhesion // inferred from electronic annotation /// 0010494 // cytoplasmic stress granule // inferred from sequence or structural similarity /// 0010494 // cytoplasmic stress granule // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005070 // SH3/SH2 adaptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from direct assay /// 0035091 // phosphatidylinositol binding // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction","chr17:37894558-37900857 (+) // 99.74 // q12"]
["11760649_a_at",0.05791092,-0.08308506,0.06951952,0.08301401,-0.05791092,-0.58454037,0.73280156,0.39005938,1.1497027,0.2012608,1.1497027,"up","MKNK1",8569.0,"0006417 // regulation of translation // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007243 // intracellular protein kinase cascade // inferred from direct assay /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr1:47023089-47082515 (-) // 99.93 // p33"]
["11738270_a_at",-0.044661522,0.001994133,-0.026974678,-0.001994133,0.1668086,0.026974678,0.5661741,0.18097821,-1.062265,-0.087143764,1.062265,"down","SERP2",387923.0,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr13:44947886-44971849 (+) // 91.7 // q14.11"]
["11735541_at",-0.025357246,-0.08767414,-0.020093203,0.07354307,0.2118411,0.020093203,0.4162063,0.0749837,-1.1066513,-0.14620072,1.1066513,"down","CCDC122",160857.0,"","","","chr13:44410490-44454599 (-) // 80.6 // q14.11"]
["11745604_x_at",0.084649086,0.017091274,-0.09604502,-0.017091751,-0.024805546,0.12958956,0.90303504,0.7264318,-1.0191259,-0.027332343,1.0191259,"down","NFKBIB",4793.0,"0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006351 // transcription, DNA-dependent // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007253 // cytoplasmic sequestering of NF-kappaB // inferred from electronic annotation /// 0008063 // Toll signaling pathway // traceable author statement /// 0032481 // positive regulation of type I interferon production // traceable author statement /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0051092 // positive regulation of NF-kappaB transcription factor activity // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation","0003713 // transcription coactivator activity // traceable author statement /// 0004871 // signal transducer activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr19:39390672-39399458 (+) // 96.25 // q13.2"]
["11754940_s_at",0.002506256,-0.019272804,0.11572456,0.0073223114,-0.002506256,-0.12442684,0.66169435,0.28831792,1.051797,0.07285633,1.051797,"up","TSN",7247.0,"0006310 // DNA recombination // traceable author statement /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003729 // mRNA binding // inferred from electronic annotation /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004519 // endonuclease activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr2:122523605-122524869 (+) // 82.15 // q14.3"]
["11734199_a_at",-0.20221877,0.017440319,-0.4981079,0.0050885677,0.045954466,-0.0050883293,0.5661741,0.18103382,-1.1834075,-0.242947,1.1834075,"down","ZNF844",284391.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:12175527-12191178 (+) // 67.75 // p13.2"]
["11721375_a_at",-0.19575119,-0.0021152496,0.06767702,-0.027827263,0.08220196,0.0021152496,0.8010044,0.5064339,-1.0440758,-0.06222652,1.0440758,"down","BCL2",596.0,"0000082 // G1/S transition of mitotic cell cycle // inferred from electronic annotation /// 0000209 // protein polyubiquitination // inferred from direct assay /// 0000902 // cell morphogenesis // inferred from electronic annotation /// 0001101 // response to acid // inferred from electronic annotation /// 0001503 // ossification // inferred from electronic annotation /// 0001541 // ovarian follicle development // inferred from electronic annotation /// 0001656 // metanephros development // inferred from electronic annotation /// 0001657 // ureteric bud development // inferred from electronic annotation /// 0001658 // branching involved in ureteric bud morphogenesis // inferred from electronic annotation /// 0001662 // behavioral fear response // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001776 // leukocyte homeostasis // inferred from electronic annotation /// 0001782 // B cell homeostasis // inferred from electronic annotation /// 0001822 // kidney development // inferred from electronic annotation /// 0001836 // release of cytochrome c from mitochondria // inferred from sequence or structural similarity /// 0001836 // release of cytochrome c from mitochondria // non-traceable author statement /// 0001952 // regulation of cell-matrix adhesion // inferred from electronic annotation /// 0002260 // lymphocyte homeostasis // inferred from electronic annotation /// 0002320 // lymphoid progenitor cell differentiation // inferred from electronic annotation /// 0002326 // B cell lineage commitment // inferred from electronic annotation /// 0002360 // T cell lineage commitment // inferred from electronic annotation /// 0002520 // immune system development // inferred from electronic annotation /// 0003014 // renal system process // inferred from electronic annotation /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0006582 // melanin metabolic process // inferred from electronic annotation /// 0006808 // regulation of nitrogen utilization // inferred from electronic annotation /// 0006874 // cellular calcium ion homeostasis // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from direct assay /// 0006916 // anti-apoptosis // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0006959 // humoral immune response // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from mutant phenotype /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0007015 // actin filament organization // inferred from electronic annotation /// 0007409 // axonogenesis // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0007565 // female pregnancy // non-traceable author statement /// 0007568 // aging // inferred from electronic annotation /// 0007569 // cell aging // inferred from electronic annotation /// 0007584 // response to nutrient // inferred from electronic annotation /// 0008219 // cell death // inferred from direct assay /// 0008219 // cell death // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0008584 // male gonad development // inferred from electronic annotation /// 0008629 // induction of apoptosis by intracellular signals // traceable author statement /// 0008633 // activation of pro-apoptotic gene products // traceable author statement /// 0009314 // response to radiation // non-traceable author statement /// 0009408 // response to heat // inferred from electronic annotation /// 0009605 // response to external stimulus // inferred from electronic annotation /// 0009636 // response to toxin // inferred from direct assay /// 0009636 // response to toxin // inferred from electronic annotation /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0010035 // response to inorganic substance // inferred from electronic annotation /// 0010039 // response to iron ion // inferred from direct assay /// 0010044 // response to aluminum ion // inferred from electronic annotation /// 0010224 // response to UV-B // inferred from electronic annotation /// 0010332 // response to gamma radiation // inferred from electronic annotation /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0010559 // regulation of glycoprotein biosynthetic process // inferred from electronic annotation /// 0014031 // mesenchymal cell development // inferred from electronic annotation /// 0014042 // positive regulation of neuron maturation // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0014911 // positive regulation of smooth muscle cell migration // inferred from electronic annotation /// 0016049 // cell growth // inferred from electronic annotation /// 0016337 // cell-cell adhesion // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from electronic annotation /// 0018107 // peptidyl-threonine phosphorylation // inferred from electronic annotation /// 0021747 // cochlear nucleus development // inferred from electronic annotation /// 0022612 // gland morphogenesis // inferred from electronic annotation /// 0022898 // regulation of transmembrane transporter activity // inferred from direct assay /// 0030097 // hemopoiesis // inferred from electronic annotation /// 0030183 // B cell differentiation // inferred from electronic annotation /// 0030217 // T cell differentiation // inferred from electronic annotation /// 0030279 // negative regulation of ossification // inferred from electronic annotation /// 0030307 // positive regulation of cell growth // inferred from direct assay /// 0030308 // negative regulation of cell growth // inferred from electronic annotation /// 0030318 // melanocyte differentiation // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // inferred from electronic annotation /// 0030890 // positive regulation of B cell proliferation // inferred from mutant phenotype /// 0031000 // response to caffeine // inferred from electronic annotation /// 0031103 // axon regeneration // inferred from electronic annotation /// 0031647 // regulation of protein stability // inferred from electronic annotation /// 0032835 // glomerulus development // inferred from electronic annotation /// 0032848 // negative regulation of cellular pH reduction // inferred from direct assay /// 0032868 // response to insulin stimulus // inferred from electronic annotation /// 0032880 // regulation of protein localization // inferred from electronic annotation /// 0033033 // negative regulation of myeloid cell apoptotic process // inferred from electronic annotation /// 0033077 // T cell differentiation in thymus // inferred from electronic annotation /// 0033591 // response to L-ascorbic acid // inferred from electronic annotation /// 0033689 // negative regulation of osteoblast proliferation // inferred from electronic annotation /// 0034097 // response to cytokine stimulus // inferred from direct assay /// 0034097 // response to cytokine stimulus // inferred from electronic annotation /// 0034349 // glial cell apoptotic process // inferred from electronic annotation /// 0035094 // response to nicotine // inferred from direct assay /// 0035094 // response to nicotine // inferred from electronic annotation /// 0035265 // organ growth // inferred from electronic annotation /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0040007 // growth // inferred from electronic annotation /// 0040018 // positive regulation of multicellular organism growth // inferred from electronic annotation /// 0042100 // B cell proliferation // inferred from direct assay /// 0042221 // response to chemical stimulus // inferred from electronic annotation /// 0042493 // response to drug // inferred from direct assay /// 0042493 // response to drug // inferred from mutant phenotype /// 0042493 // response to drug // inferred from electronic annotation /// 0042542 // response to hydrogen peroxide // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043029 // T cell homeostasis // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043067 // regulation of programmed cell death // inferred from electronic annotation /// 0043085 // positive regulation of catalytic activity // inferred from electronic annotation /// 0043375 // CD8-positive, alpha-beta T cell lineage commitment // inferred from electronic annotation /// 0043434 // response to peptide hormone stimulus // inferred from electronic annotation /// 0043496 // regulation of protein homodimerization activity // inferred from direct assay /// 0043497 // regulation of protein heterodimerization activity // inferred from direct assay /// 0043524 // negative regulation of neuron apoptotic process // inferred from direct assay /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0043583 // ear development // inferred from electronic annotation /// 0043627 // response to estrogen stimulus // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045471 // response to ethanol // inferred from electronic annotation /// 0045636 // positive regulation of melanocyte differentiation // inferred from electronic annotation /// 0045930 // negative regulation of mitotic cell cycle // inferred from electronic annotation /// 0046671 // negative regulation of retinal cell programmed cell death // inferred from electronic annotation /// 0046688 // response to copper ion // inferred from electronic annotation /// 0046902 // regulation of mitochondrial membrane permeability // inferred from sequence or structural similarity /// 0048041 // focal adhesion assembly // inferred from electronic annotation /// 0048066 // developmental pigmentation // inferred from electronic annotation /// 0048070 // regulation of developmental pigmentation // inferred from electronic annotation /// 0048087 // positive regulation of developmental pigmentation // inferred from electronic annotation /// 0048536 // spleen development // inferred from electronic annotation /// 0048538 // thymus development // inferred from electronic annotation /// 0048545 // response to steroid hormone stimulus // inferred from electronic annotation /// 0048546 // digestive tract morphogenesis // inferred from electronic annotation /// 0048589 // developmental growth // inferred from electronic annotation /// 0048599 // oocyte development // inferred from electronic annotation /// 0048709 // oligodendrocyte differentiation // inferred from electronic annotation /// 0048743 // positive regulation of skeletal muscle fiber development // inferred from electronic annotation /// 0048753 // pigment granule organization // inferred from electronic annotation /// 0048873 // homeostasis of number of cells within a tissue // inferred from electronic annotation /// 0050790 // regulation of catalytic activity // inferred from electronic annotation /// 0050853 // B cell receptor signaling pathway // inferred from mutant phenotype /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation /// 0051402 // neuron apoptotic process // traceable author statement /// 0051402 // neuron apoptotic process // inferred from electronic annotation /// 0051412 // response to corticosterone stimulus // inferred from electronic annotation /// 0051593 // response to folic acid // inferred from electronic annotation /// 0051607 // defense response to virus // inferred from direct assay /// 0051726 // regulation of cell cycle // inferred from electronic annotation /// 0051881 // regulation of mitochondrial membrane potential // inferred from sequence or structural similarity /// 0051902 // negative regulation of mitochondrial depolarization // traceable author statement /// 0051924 // regulation of calcium ion transport // inferred from direct assay /// 0070059 // intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress // inferred from direct assay /// 0071310 // cellular response to organic substance // inferred from electronic annotation /// 0072593 // reactive oxygen species metabolic process // inferred from electronic annotation /// 2001234 // negative regulation of apoptotic signaling pathway // inferred from mutant phenotype","0005622 // intracellular // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from direct assay /// 0005741 // mitochondrial outer membrane // traceable author statement /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from direct assay /// 0031965 // nuclear membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation /// 0043209 // myelin sheath // inferred from electronic annotation /// 0046930 // pore complex // inferred from direct assay","0002020 // protease binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0015267 // channel activity // inferred from direct assay /// 0019903 // protein phosphatase binding // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0051400 // BH domain binding // inferred from electronic annotation /// 0051434 // BH3 domain binding // inferred from physical interaction /// 0051721 // protein phosphatase 2A binding // inferred from electronic annotation","chr18:60790581-60987019 (-) // 96.73 // q21.33"]
["11715890_x_at",-0.017355919,-0.010791779,0.07573128,-0.02064228,0.021205902,0.010791779,0.9042729,0.72925824,1.0084056,0.012075987,1.0084056,"up","ATP5I",521.0,"0006200 // ATP catabolic process // inferred from direct assay /// 0006754 // ATP biosynthetic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0015986 // ATP synthesis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0042776 // mitochondrial ATP synthesis coupled proton transport // inferred by curator /// 0042776 // mitochondrial ATP synthesis coupled proton transport // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046034 // ATP metabolic process // inferred from electronic annotation","0000276 // mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) // inferred from electronic annotation /// 0005739 // mitochondrion // inferred by curator /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005753 // mitochondrial proton-transporting ATP synthase complex // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0045263 // proton-transporting ATP synthase complex, coupling factor F(o) // inferred from electronic annotation","0015078 // hydrogen ion transmembrane transporter activity // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from direct assay /// 0022857 // transmembrane transporter activity // inferred by curator","chr4:666224-668127 (-) // 69.88 // p16.3"]
["11741639_a_at",-0.04737234,0.024807453,-0.03392172,0.18361282,-0.024807453,0.18909264,0.5212337,0.14184478,-1.0979366,-0.13479479,1.0979366,"down","DIO2",1734.0,"0001514 // selenocysteine incorporation // non-traceable author statement /// 0006590 // thyroid hormone generation // traceable author statement /// 0006590 // thyroid hormone generation // inferred from electronic annotation /// 0009409 // response to cold // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042403 // thyroid hormone metabolic process // inferred from direct assay /// 0042404 // thyroid hormone catabolic process // inferred from electronic annotation /// 0042446 // hormone biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred by curator /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004800 // thyroxine 5'-deiodinase activity // inferred from direct assay /// 0004800 // thyroxine 5'-deiodinase activity // traceable author statement /// 0004800 // thyroxine 5'-deiodinase activity // inferred from electronic annotation /// 0008430 // selenium binding // inferred by curator /// 0008430 // selenium binding // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction","chr14:80663869-80677843 (-) // 97.08 // q31.1"]
["11737705_s_at",0.051769495,-0.060309887,0.009754658,-0.009754658,0.17065549,-0.040938616,0.8558571,0.619277,-1.0278164,-0.0395826,1.0278164,"down","LOC441956",441956.0,"","","","chr21:15051592-15053459 (-) // 94.97 // q11.2"]
["11745173_a_at",-0.09774399,-0.08763075,0.021028519,0.061145782,0.023159027,-0.021028519,0.54899347,0.165759,-1.0539995,-0.07587424,1.0539995,"down","ATF6",22926.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006457 // protein folding // traceable author statement /// 0006950 // response to stress // traceable author statement /// 0006986 // response to unfolded protein // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0006990 // positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement","0000139 // Golgi membrane // traceable author statement /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003713 // transcription coactivator activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation","chr1:161736044-161835750 (+) // 76.51 // q23.3"]
["11743650_s_at",0.026453972,-0.016990662,0.13310337,-0.013721466,0.013721466,-0.036219597,0.64870524,0.2724563,1.0421735,0.05959548,1.0421735,"up","DEK",7913.0,"0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0016568 // chromatin modification // inferred from electronic annotation /// 0019079 // viral genome replication // traceable author statement /// 2000779 // regulation of double-strand break repair // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0042393 // histone binding // inferred from direct assay","chr6:18224247-18265054 (-) // 96.95 // p22.3"]
["11722908_a_at",0.0027256012,0.004986763,0.114611626,-0.0027256012,-0.033236504,-0.04486561,0.54160064,0.1575406,1.0480571,0.06771729,1.0480571,"up","KLHL13",90293.0,"0000910 // cytokinesis // inferred from mutant phenotype /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0031463 // Cul3-RING ubiquitin ligase complex // inferred from direct assay","0004842 // ubiquitin-protein ligase activity // inferred from direct assay","chrX:117031775-117107760 (-) // 96.61 // q24"]
["11736322_a_at",-0.026040077,-0.026705742,0.026040077,-0.033686638,0.07593107,0.15711737,0.6417999,0.2635425,-1.0536209,-0.07535592,1.0536209,"down","BAIAP3",8938.0,"0007186 // G-protein coupled receptor signaling pathway // inferred from physical interaction /// 0007269 // neurotransmitter secretion // traceable author statement","","0008022 // protein C-terminus binding // traceable author statement","chr16:1384504-1399440 (+) // 97.1 // p13.3"]
["11727575_a_at",0.020178318,-0.1709609,0.33708286,-0.020178318,0.34997606,-0.031225204,0.9526684,0.8564378,-1.0262798,-0.037424125,1.0262798,"down","TMEM237",65062.0,"0030030 // cell projection organization // inferred from electronic annotation /// 0030111 // regulation of Wnt receptor signaling pathway // inferred from mutant phenotype /// 0030111 // regulation of Wnt receptor signaling pathway // inferred from electronic annotation /// 0042384 // cilium assembly // inferred from mutant phenotype /// 0042384 // cilium assembly // inferred from electronic annotation","0005929 // cilium // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0035869 // ciliary transition zone // inferred from direct assay /// 0035869 // ciliary transition zone // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","","chr2:202484910-202507686 (-) // 72.55 // q33.1"]
["11752260_a_at",0.028077364,0.022474766,-0.16849232,-0.103964806,0.07196283,-0.022474527,0.9364887,0.80962145,-1.0147712,-0.021154514,1.0147712,"down","TMC3",342125.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr15:81629982-81666497 (-) // 93.69 // q25.1"]
["11745069_a_at",0.034119606,-0.25824785,-0.15185261,0.048237324,0.0993495,-0.034119606,0.5411267,0.15718365,-1.1197288,-0.16314936,1.1197288,"down","C5orf44",80006.0,"","","","chr5:64958926-64961899 (+) // 89.97 // q12.3"]
["11748282_a_at",0.03229761,0.051660538,0.058331013,-0.075948715,-0.08121061,-0.03229761,0.13124941,0.0031127357,1.0796638,0.110582076,1.0796638,"up","PPP3CB",5532.0,"0006468 // protein phosphorylation // inferred from sequence or structural similarity /// 0006470 // protein dephosphorylation // inferred from sequence or structural similarity /// 0007165 // signal transduction // non-traceable author statement /// 0007612 // learning // traceable author statement /// 0007613 // memory // traceable author statement /// 0016311 // dephosphorylation // traceable author statement /// 0017156 // calcium ion-dependent exocytosis // inferred from sequence or structural similarity /// 0035176 // social behavior // inferred from expression pattern /// 0035690 // cellular response to drug // inferred from direct assay /// 0035774 // positive regulation of insulin secretion involved in cellular response to glucose stimulus // inferred from sequence or structural similarity /// 0042098 // T cell proliferation // non-traceable author statement /// 0042110 // T cell activation // traceable author statement /// 0045893 // positive regulation of transcription, DNA-dependent // non-traceable author statement /// 0048167 // regulation of synaptic plasticity // traceable author statement /// 0048675 // axon extension // traceable author statement /// 0050796 // regulation of insulin secretion // inferred from sequence or structural similarity","0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005955 // calcineurin complex // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004722 // protein serine/threonine phosphatase activity // non-traceable author statement /// 0005509 // calcium ion binding // inferred from direct assay /// 0005516 // calmodulin binding // inferred from direct assay /// 0005516 // calmodulin binding // non-traceable author statement /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0008144 // drug binding // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from direct assay /// 0030346 // protein phosphatase 2B binding // inferred from direct assay /// 0033192 // calmodulin-dependent protein phosphatase activity // inferred from sequence or structural similarity /// 0033192 // calmodulin-dependent protein phosphatase activity // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from physical interaction","chr10:75196996-75226245 (-) // 98.36 // q22.2"]
["11728165_a_at",-0.09988308,-0.017730236,0.07986283,-0.14010191,0.017730236,0.20339036,0.90970504,0.7416579,-1.0278215,-0.039589792,1.0278215,"down","SPINLW1 /// SPINLW1-WFDC6","100526773 /// 57119","0006508 // proteolysis // inferred from electronic annotation /// 0010466 // negative regulation of peptidase activity // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation","chr20:44169549-44175016 (-) // 46.5 // q13.12"]
["11760927_a_at",0.009924412,-0.0032701492,0.03105402,-0.035410404,-0.014281273,0.0032701492,0.51071995,0.13487887,1.0196283,0.028043302,1.0196283,"up","LRCH3",84859.0,"","0005576 // extracellular region // inferred from electronic annotation","","chr3:197518109-197610643 (+) // 99.4 // q29"]
["11762829_at",0.074297905,0.0130229,0.021246433,-0.0130229,-0.0844512,-0.2776742,0.48897666,0.118517876,1.1182467,0.16123846,1.1182467,"up","LOC100506242",1.00506242E8,"","","","chr1:180138711-180139938 (+) // 98.94 // q25.2"]
["11725481_a_at",-0.02011156,0.02011156,-0.05615282,0.02509737,-0.12228918,0.20651388,0.8488556,0.6021814,-1.0389731,-0.05515829,1.0389731,"down","CD27",939.0,"0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from direct assay /// 0006916 // anti-apoptosis // inferred from sequence or structural similarity /// 0006916 // anti-apoptosis // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from direct assay /// 0006917 // induction of apoptosis // inferred from sequence or structural similarity /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // non-traceable author statement /// 0008588 // release of cytoplasmic sequestered NF-kappaB // non-traceable author statement /// 0016064 // immunoglobulin mediated immune response // non-traceable author statement /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0045471 // response to ethanol // inferred from electronic annotation /// 0045579 // positive regulation of B cell differentiation // non-traceable author statement /// 0046330 // positive regulation of JNK cascade // inferred from sequence or structural similarity /// 0046330 // positive regulation of JNK cascade // inferred from electronic annotation","0005576 // extracellular region // non-traceable author statement /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0043027 // cysteine-type endopeptidase inhibitor activity involved in apoptotic process // inferred from direct assay","chr12:6554005-6560879 (+) // 98.05 // p13.31"]
["11747748_a_at",0.07474661,-0.07474661,-0.0768404,0.32673526,0.13258839,-0.14961886,0.75916314,0.430569,-1.0934205,-0.12884833,1.0934205,"down","ETV1",2115.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0048935 // peripheral nervous system neuron development // traceable author statement","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr7:13935307-14026086 (-) // 98.49 // p21.2"]
["11753489_a_at",-0.032232285,-0.04347992,0.017867088,5.7697296E-4,-5.7697296E-4,0.027791977,0.6287485,0.24584772,-1.0199834,-0.028545687,1.0199834,"down","EED",8726.0,"0006349 // regulation of gene expression by genetic imprinting // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0016571 // histone methylation // inferred from direct assay /// 0016571 // histone methylation // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // non-traceable author statement","0001739 // sex chromatin // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0035098 // ESC/E(Z) complex // inferred from direct assay /// 0035098 // ESC/E(Z) complex // inferred from electronic annotation /// 0045120 // pronucleus // inferred from electronic annotation","0003682 // chromatin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0042054 // histone methyltransferase activity // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction","chr11:85956265-85988054 (+) // 99.75 // q14.2"]
["11736030_a_at",0.004278183,0.007818222,0.06272888,-0.007816315,-0.03738594,-0.004278183,0.50156033,0.12800923,1.0291371,0.041435238,1.0291371,"up","SLC16A3",9123.0,"0006090 // pyruvate metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0015711 // organic anion transport // inferred from electronic annotation /// 0015718 // monocarboxylic acid transport // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0050900 // leukocyte migration // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from direct assay","0008028 // monocarboxylic acid transmembrane transporter activity // traceable author statement /// 0015293 // symporter activity // inferred from electronic annotation /// 0015355 // secondary active monocarboxylate transmembrane transporter activity // inferred from electronic annotation","chr17:80193855-80197354 (+) // 93.66 // q25.3"]
["11759273_x_at",-0.12739563,-0.0054717064,0.0054717064,0.031915665,-0.12286663,0.012007713,0.93837523,0.8149736,-1.0112578,-0.016150784,1.0112578,"down","HIST1H2BC /// HIST1H2BE /// HIST1H2BF /// HIST1H2BG /// HIST1H2BI","8339 /// 8343 /// 8344 /// 8346 /// 8347","0006334 // nucleosome assembly // non-traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0042742 // defense response to bacterium // inferred from electronic annotation","0000786 // nucleosome // non-traceable author statement /// 0000786 // nucleosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation","chr6:26273143-26273640 (+) // 100.0 // p22.2"]
["11720863_at",-0.016066551,0.013425827,0.024907112,0.021978378,-0.12447834,-0.013425827,0.7209256,0.37119752,1.0324444,0.04606403,1.0324444,"up","PNPLA4",8228.0,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0016042 // lipid catabolic process // inferred from electronic annotation","","0004806 // triglyceride lipase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0050253 // retinyl-palmitate esterase activity // inferred from electronic annotation","chrX:7866803-7895477 (-) // 83.75 // p22.31"]
["11749228_a_at",-0.028323174,-0.02682209,-0.045297146,0.1713357,0.02682209,0.116046906,0.3041726,0.031344034,-1.1005431,-0.13821569,1.1005431,"down","TMEM30A",55754.0,"0036010 // protein localization in endosome // inferred from mutant phenotype /// 0070863 // positive regulation of protein exit from endoplasmic reticulum // inferred from direct assay","0005783 // endoplasmic reticulum // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr6:75965367-75994502 (-) // 93.61 // q14.1"]
["11716184_s_at",0.0059947968,-0.098851204,0.13990974,0.009465218,-0.0059947968,-0.0066423416,0.94057024,0.8209686,1.0116721,0.01674182,1.0116721,"up","ALCAM",214.0,"0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007411 // axon guidance // inferred from electronic annotation /// 0008045 // motor axon guidance // inferred from electronic annotation","0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation","0005102 // receptor binding // traceable author statement","chr3:105085712-105295746 (+) // 96.66 // q13.11"]
["11727671_a_at",0.045773983,0.0,0.07076883,-0.014179707,0.0,-0.0060572624,0.45368788,0.09706607,1.0321075,0.045593206,1.0321075,"up","SYT17",51760.0,"0006810 // transport // inferred from electronic annotation","0005802 // trans-Golgi network // inferred from electronic annotation /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation","chr16:19179534-19279656 (+) // 91.6 // p12.3"]
["11724241_at",-0.0701735,0.017492294,-0.0036373138,0.045294285,0.0036373138,-0.06210661,0.9102536,0.743031,-1.0100181,-0.014381162,1.0100181,"down","TCF4",6925.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006352 // transcription initiation, DNA-dependent // inferred from sequence or structural similarity /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0007399 // nervous system development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0065004 // protein-DNA complex assembly // inferred from sequence or structural similarity","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from sequence or structural similarity /// 0005667 // transcription factor complex // inferred from electronic annotation","0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from sequence or structural similarity /// 0001011 // sequence-specific DNA binding RNA polymerase recruiting transcription factor activity // inferred from sequence or structural similarity /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from sequence or structural similarity /// 0001087 // TFIIB-class binding transcription factor activity // inferred from sequence or structural similarity /// 0001093 // TFIIB-class transcription factor binding // inferred from sequence or structural similarity /// 0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003714 // transcription corepressor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from sequence or structural similarity /// 0046982 // protein heterodimerization activity // non-traceable author statement /// 0070888 // E-box binding // inferred from sequence or structural similarity","chr18:52889564-53255860 (-) // 95.08 // q21.2"]
["11741178_a_at",-0.052001476,0.11517596,0.077564,0.0012714863,-0.0012717247,-0.0068559647,0.73065233,0.38673764,1.0346898,0.04919829,1.0346898,"up","UPB1",51733.0,"0006206 // pyrimidine base metabolic process // traceable author statement /// 0006807 // nitrogen compound metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0019483 // beta-alanine biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046135 // pyrimidine nucleoside catabolic process // traceable author statement /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0003824 // catalytic activity // inferred from electronic annotation /// 0003837 // beta-ureidopropionase activity // not recorded /// 0003837 // beta-ureidopropionase activity // inferred from electronic annotation /// 0003837 // beta-ureidopropionase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016810 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr22:24891114-24922552 (+) // 71.56 // q11.23"]
["11746802_x_at",0.04921055,-8.72612E-4,0.086195946,-0.066820145,8.72612E-4,-0.024430275,0.42438546,0.079378426,1.0533396,0.07497064,1.0533396,"up","BNIP3L",665.0,"0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from direct assay /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0008634 // negative regulation of survival gene product expression // inferred from direct assay /// 0035694 // mitochondrial protein catabolic process // inferred from mutant phenotype /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0051607 // defense response to virus // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from direct assay /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005740 // mitochondrial envelope // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from mutant phenotype /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031224 // intrinsic to membrane // traceable author statement","0005515 // protein binding // inferred from physical interaction /// 0005521 // lamin binding // inferred from direct assay /// 0005521 // lamin binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from direct assay","chr8:26240552-26268534 (+) // 98.94 // p21.2"]
["11732426_a_at",0.006676674,-0.18429422,0.05986166,0.2923565,-0.046860933,-0.006676674,0.7475771,0.41286018,-1.0858752,-0.11885824,1.0858752,"down","GNA14",9630.0,"0006184 // GTP catabolic process // traceable author statement /// 0006471 // protein ADP-ribosylation // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007188 // adenylate cyclase-modulating G-protein coupled receptor signaling pathway // not recorded /// 0007596 // blood coagulation // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0060158 // phospholipase C-activating dopamine receptor signaling pathway // not recorded","0005834 // heterotrimeric G-protein complex // not recorded /// 0005834 // heterotrimeric G-protein complex // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0031234 // extrinsic to internal side of plasma membrane // not recorded","0000166 // nucleotide binding // inferred from electronic annotation /// 0001664 // G-protein coupled receptor binding // not recorded /// 0003924 // GTPase activity // traceable author statement /// 0004871 // signal transducer activity // not recorded /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0004871 // signal transducer activity // non-traceable author statement /// 0005525 // GTP binding // inferred from electronic annotation /// 0019001 // guanyl nucleotide binding // inferred from electronic annotation /// 0031683 // G-protein beta/gamma-subunit complex binding // not recorded /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:80037512-80263664 (-) // 98.65 // q21.2"]
["11745158_x_at",0.117816925,0.1391325,0.045347214,-0.058991432,-0.08554077,-0.045347214,0.16465795,0.0059369532,1.1204348,0.16405864,1.1204348,"up","MUC1",4582.0,"0006916 // anti-apoptosis // inferred from direct assay /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // inferred from direct assay /// 0006978 // DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator // inferred from direct assay /// 0010944 // negative regulation of transcription by competitive promoter binding // inferred from direct assay /// 0016266 // O-glycan processing // traceable author statement /// 0036003 // positive regulation of transcription from RNA polymerase II promoter in response to stress // inferred from direct assay /// 0043618 // regulation of transcription from RNA polymerase II promoter in response to stress // inferred from direct assay /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0090240 // positive regulation of histone H4 acetylation // inferred from direct assay","0000790 // nuclear chromatin // inferred from direct assay /// 0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // not recorded /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005796 // Golgi lumen // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0009986 // cell surface // not recorded /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // not recorded /// 0016324 // apical plasma membrane // inferred from electronic annotation","0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0002039 // p53 binding // inferred from physical interaction /// 0003712 // transcription cofactor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction","chr1:155158423-155162684 (-) // 100.0 // q22"]
["11722098_a_at",-0.019772053,0.008547306,-0.04996395,0.14606762,-0.008546829,0.15858507,0.4617393,0.10203228,-1.0860558,-0.11909817,1.0860558,"down","RICTOR",253260.0,"0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0009790 // embryo development // inferred from sequence or structural similarity /// 0009790 // embryo development // inferred from electronic annotation /// 0030838 // positive regulation of actin filament polymerization // inferred from electronic annotation /// 0031295 // T cell costimulation // traceable author statement /// 0031532 // actin cytoskeleton reorganization // inferred from mutant phenotype /// 0032008 // positive regulation of TOR signaling cascade // inferred from mutant phenotype /// 0032314 // regulation of Rac GTPase activity // inferred from electronic annotation /// 0032956 // regulation of actin cytoskeleton organization // inferred from mutant phenotype /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0051896 // regulation of protein kinase B signaling cascade // inferred from direct assay /// 0051896 // regulation of protein kinase B signaling cascade // inferred from electronic annotation","0005829 // cytosol // traceable author statement /// 0031932 // TORC2 complex // inferred from direct assay /// 0031932 // TORC2 complex // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0043022 // ribosome binding // inferred from electronic annotation","chr5:38938021-39074503 (-) // 97.8 // p13.1"]
["11761794_x_at",-0.13195848,0.06271124,-0.06271124,0.16190815,0.10667372,-0.068593025,0.65945137,0.28560308,-1.079714,-0.11064913,1.079714,"down","FAM122C",159091.0,"","","","chrX:133941299-133955985 (+) // 83.02 // q26.3"]
["11732234_a_at",0.0043582916,-0.0043582916,0.1838932,-0.08066273,0.0066423416,-0.01976633,0.6207752,0.23678564,1.0662605,0.09255989,1.0662605,"up","RND1",27289.0,"0006184 // GTP catabolic process // non-traceable author statement /// 0007015 // actin filament organization // inferred from direct assay /// 0007162 // negative regulation of cell adhesion // inferred from direct assay /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0016322 // neuron remodeling // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005912 // adherens junction // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // non-traceable author statement /// 0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation","chr12:49250931-49259681 (-) // 97.96 // q13.12"]
["11717396_a_at",-0.02976799,0.03789997,-0.020449638,-0.019159317,0.019159317,0.041610718,0.8243878,0.5507058,-1.0125381,-0.01797616,1.0125381,"down","CHTF8",54921.0,"0006260 // DNA replication // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation","chr16:68973480-69155398 (-) // 95.1 // q22.1"]
["11731720_at",-0.09877491,0.09877467,-0.3635285,0.12212205,-0.28481197,0.18556261,0.82562083,0.5529863,-1.0933843,-0.12880051,1.0933843,"down","LURAP1",541468.0,"0001819 // positive regulation of cytokine production // inferred from direct assay /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from direct assay","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","","chr1:46669005-46687158 (+) // 83.24 // p34.1"]
["11759378_at",0.11388731,-0.2768166,-0.2173605,-0.018449306,0.018449306,0.14476538,0.633141,0.25310984,-1.1289788,-0.17501846,1.1289788,"down","NHSL2",340527.0,"","","","chrX:71353497-71361212 (+) // 99.3 // q13.1"]
["11728541_s_at",0.029911518,0.043577194,-0.029911518,0.05713606,-0.13838768,-0.04497385,0.7423058,0.40461266,1.0400125,0.05660084,1.0400125,"up","MDGA1",266727.0,"0001764 // neuron migration // inferred from sequence or structural similarity /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007420 // brain development // inferred from sequence or structural similarity /// 0007420 // brain development // inferred from electronic annotation /// 0021527 // spinal cord association neuron differentiation // inferred from sequence or structural similarity /// 0021527 // spinal cord association neuron differentiation // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031225 // anchored to membrane // inferred from electronic annotation /// 0046658 // anchored to plasma membrane // inferred from direct assay /// 0046658 // anchored to plasma membrane // inferred from sequence or structural similarity /// 0046658 // anchored to plasma membrane // inferred from electronic annotation","","chr6:37600292-37665766 (-) // 93.0 // p21.2"]
["11741765_a_at",-0.0032868385,-0.058151245,-0.0154156685,0.11823559,0.0032868385,0.20227623,0.4417906,0.09012212,-1.0969903,-0.13355082,1.0969903,"down","METTL20",254013.0,"0006479 // protein methylation // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0008168 // methyltransferase activity // inferred from electronic annotation /// 0008276 // protein methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr12:31800090-31821817 (+) // 67.24 // p11.21"]
["11720384_at",-0.031292915,-0.029087067,-0.05325699,0.029087067,0.071536064,0.08594036,0.16462703,0.0059125083,-1.0718231,-0.10006684,1.0718231,"down","STX6",10228.0,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006906 // vesicle fusion // inferred from physical interaction /// 0007032 // endosome organization // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0042147 // retrograde transport, endosome to Golgi // inferred from mutant phenotype /// 0048193 // Golgi vesicle transport // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030136 // clathrin-coated vesicle // traceable author statement /// 0032588 // trans-Golgi network membrane // inferred from sequence or structural similarity /// 0032588 // trans-Golgi network membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0005484 // SNAP receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr1:180941851-180992257 (-) // 97.46 // q25.3"]
["11730642_at",0.023888111,-0.023888111,0.15434694,0.2357316,-0.08175182,-0.03501177,0.9755146,0.9214806,1.0082078,0.011793018,1.0082078,"up","CXorf48",54967.0,"","","","chrX:134290460-134305751 (-) // 86.07 // q26.3"]
["11717826_x_at",-0.028352022,0.042073727,-0.14000249,-0.03772807,0.07000804,0.028352022,0.71982753,0.3689708,-1.0441321,-0.062304266,1.0441321,"down","STMN2",11075.0,"0007026 // negative regulation of microtubule depolymerization // inferred from direct assay /// 0010976 // positive regulation of neuron projection development // inferred from direct assay /// 0010977 // negative regulation of neuron projection development // inferred from direct assay /// 0030182 // neuron differentiation // non-traceable author statement /// 0031115 // negative regulation of microtubule polymerization // inferred from direct assay /// 0031117 // positive regulation of microtubule depolymerization // inferred from direct assay /// 0035556 // intracellular signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030426 // growth cone // inferred from electronic annotation /// 0031982 // vesicle // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr8:80523048-80578397 (+) // 92.49 // q21.13"]
["11759396_a_at",0.034776688,0.005839348,0.017139912,-0.005839348,-0.014745712,-0.16164255,0.5794328,0.19331451,1.057014,0.07999447,1.057014,"up","BTN2A3P",54718.0,"","0016021 // integral to membrane // inferred from electronic annotation","","chr6:26422346-26431843 (+) // 100.0 // p22.2"]
["11718709_a_at",0.02041626,-0.019375801,-0.0122413635,0.015294552,-0.048537254,0.01224184,0.96681243,0.8988439,1.0022669,0.0032667208,1.0022669,"up","TBC1D9B",23061.0,"0032313 // regulation of Rab GTPase activity // inferred from electronic annotation /// 0032851 // positive regulation of Rab GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005097 // Rab GTPase activator activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation","chr5:179289065-179334881 (-) // 94.81 // q35.3"]
["11756889_s_at",-0.0074629784,0.007463217,0.0928514,0.007463217,-0.033370733,-0.05808401,0.56836945,0.18284018,1.0417057,0.058947787,1.0417057,"up","SNAP91",9892.0,"0007163 // establishment or maintenance of cell polarity // inferred from electronic annotation /// 0007409 // axonogenesis // inferred from electronic annotation /// 0030100 // regulation of endocytosis // inferred from electronic annotation /// 0048268 // clathrin coat assembly // inferred from electronic annotation /// 0051223 // regulation of protein transport // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0005905 // coated pit // inferred from electronic annotation /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030118 // clathrin coat // inferred from electronic annotation /// 0042734 // presynaptic membrane // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0005543 // phospholipid binding // inferred from electronic annotation /// 0005545 // 1-phosphatidylinositol binding // inferred from electronic annotation /// 0030276 // clathrin binding // inferred from electronic annotation","chr6:84262619-84417677 (-) // 91.64 // q14.2"]
["11733207_a_at",0.060068607,-0.04813242,-0.0660758,0.0032773018,0.06541586,-0.0032777786,0.75725746,0.42653352,-1.0280081,-0.039851636,1.0280081,"down","ZNF480",147657.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:52800420-52826572 (+) // 39.83 // q13.41"]
["11719541_a_at",0.049030304,0.009712219,-0.06748009,-0.009712219,-0.053876877,0.06882858,0.978176,0.9296583,-1.0032346,-0.004659046,1.0032346,"down","GCFC1",94104.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation","chr21:34106209-34144173 (-) // 98.03 // q22.11"]
["11755665_x_at",0.0012469292,-0.049271584,0.09281397,-0.0012464523,-0.063051224,0.058775425,0.9240132,0.77350175,1.0116923,0.01677055,1.0116923,"up","VARS2",57176.0,"0006412 // translation // inferred from electronic annotation /// 0006418 // tRNA aminoacylation for protein translation // traceable author statement /// 0006418 // tRNA aminoacylation for protein translation // inferred from electronic annotation /// 0006438 // valyl-tRNA aminoacylation // inferred from electronic annotation /// 0006450 // regulation of translational fidelity // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0002161 // aminoacyl-tRNA editing activity // inferred from electronic annotation /// 0004812 // aminoacyl-tRNA ligase activity // inferred from electronic annotation /// 0004832 // valine-tRNA ligase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation","chr6:30886338-30894233 (+) // 92.82 // p21.33"]
["11728246_at",0.018874168,0.0787406,0.004840851,-0.11190891,-0.07036686,-0.004840851,0.39907488,0.0664089,1.0691943,0.096524075,1.0691943,"up","FAM134A",79137.0,"","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr2:220042938-220050201 (+) // 79.33 // q35"]
["11745944_s_at",-0.1167202,0.07594681,-0.23112297,-0.03896761,0.03896761,0.08127594,0.66169435,0.28850517,-1.0850219,-0.1177241,1.0850219,"down","CHPF",79586.0,"","0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation","0016740 // transferase activity // inferred from electronic annotation /// 0016758 // transferase activity, transferring hexosyl groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047238 // glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity // inferred from electronic annotation /// 0050510 // N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase activity // inferred from electronic annotation","chr2:220404093-220407819 (-) // 99.64 // q35"]
["11740999_a_at",-0.045411587,0.13792467,0.04167509,-0.04167509,-0.18557715,0.11492753,0.77916765,0.46421772,1.0586098,0.08217097,1.0586098,"up","GAP43",2596.0,"0007205 // protein kinase C-activating G-protein coupled receptor signaling pathway // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0009611 // response to wounding // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0040008 // regulation of growth // inferred from electronic annotation /// 0051489 // regulation of filopodium assembly // inferred from direct assay","0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0031527 // filopodium membrane // inferred from direct assay /// 0031527 // filopodium membrane // inferred from electronic annotation /// 0032584 // growth cone membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from electronic annotation","chr3:115342150-115440334 (+) // 75.53 // q13.31"]
["11742455_a_at",0.025684595,-0.03395772,-0.14958668,0.067587376,-0.025684595,0.10694766,0.5755811,0.18954283,-1.0734364,-0.10223669,1.0734364,"down","DPF3",8110.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0071565 // nBAF complex // inferred from sequence or structural similarity","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr14:73136659-73360809 (-) // 98.94 // q24.2"]
["11718635_at",0.048550606,0.06736946,0.006006241,-0.114551544,-0.006006241,-0.09656525,0.3379277,0.041544255,1.081487,0.113016404,1.081487,"up","KIF1B",23095.0,"0006200 // ATP catabolic process // inferred from sequence or structural similarity /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007018 // microtubule-based movement // inferred from sequence or structural similarity /// 0007018 // microtubule-based movement // inferred from electronic annotation /// 0007270 // neuron-neuron synaptic transmission // inferred from sequence or structural similarity /// 0007270 // neuron-neuron synaptic transmission // inferred from electronic annotation /// 0007274 // neuromuscular synaptic transmission // inferred from sequence or structural similarity /// 0007274 // neuromuscular synaptic transmission // inferred from electronic annotation /// 0008089 // anterograde axon cargo transport // inferred from sequence or structural similarity /// 0008089 // anterograde axon cargo transport // inferred from electronic annotation /// 0030705 // cytoskeleton-dependent intracellular transport // inferred from sequence or structural similarity /// 0030705 // cytoskeleton-dependent intracellular transport // inferred from electronic annotation /// 0047497 // mitochondrion transport along microtubule // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005875 // microtubule associated complex // inferred from sequence or structural similarity /// 0005875 // microtubule associated complex // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from sequence or structural similarity /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from sequence or structural similarity /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043005 // neuron projection // inferred from sequence or structural similarity","0000166 // nucleotide binding // inferred from electronic annotation /// 0003777 // microtubule motor activity // inferred from sequence or structural similarity /// 0003777 // microtubule motor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from sequence or structural similarity /// 0016887 // ATPase activity // inferred from electronic annotation /// 0019894 // kinesin binding // traceable author statement","chr1:10270763-10368652 (+) // 90.43 // p36.22"]
["11738079_at",-0.1725192,-0.0425272,0.0425272,0.045604706,-0.13656044,0.04581213,0.870596,0.6517437,-1.0298674,-0.04245861,1.0298674,"down","NR2E3",10002.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007601 // visual perception // inferred from electronic annotation /// 0007601 // visual perception // traceable author statement /// 0007602 // phototransduction // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0030522 // intracellular receptor mediated signaling pathway // traceable author statement /// 0043401 // steroid hormone mediated signaling pathway // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003707 // steroid hormone receptor activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004879 // ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr15:72102885-72107270 (+) // 88.82 // q23"]
["11725327_a_at",0.018604279,-0.091220856,-0.064180374,0.07611275,-0.018177032,0.018176556,0.5593697,0.17385249,-1.0504225,-0.07096979,1.0504225,"down","CAMK2D",817.0,"0001558 // regulation of cell growth // non-traceable author statement /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // non-traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0008016 // regulation of heart contraction // traceable author statement /// 0010613 // positive regulation of cardiac muscle hypertrophy // inferred from mutant phenotype /// 0010881 // regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0060314 // regulation of ryanodine-sensitive calcium-release channel activity // traceable author statement /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060341 // regulation of cellular localization // inferred from mutant phenotype","0005654 // nucleoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005954 // calcium- and calmodulin-dependent protein kinase complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016529 // sarcoplasmic reticulum // inferred from electronic annotation /// 0030666 // endocytic vesicle membrane // traceable author statement /// 0033017 // sarcoplasmic reticulum membrane // inferred from electronic annotation /// 0042383 // sarcolemma // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004683 // calmodulin-dependent protein kinase activity // inferred from electronic annotation /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005524 // ATP binding // non-traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr4:114372189-114683202 (-) // 84.34 // q26"]
["11734301_at",0.13257241,-0.16622066,0.07689834,-0.0768981,0.099402666,-0.2879541,0.80696476,0.5164186,1.0739299,0.102899835,1.0739299,"up","MBL2",4153.0,"0001867 // complement activation, lectin pathway // inferred from direct assay /// 0001867 // complement activation, lectin pathway // inferred from physical interaction /// 0001867 // complement activation, lectin pathway // traceable author statement /// 0001867 // complement activation, lectin pathway // inferred from electronic annotation /// 0006953 // acute-phase response // traceable author statement /// 0006956 // complement activation // traceable author statement /// 0006958 // complement activation, classical pathway // inferred from electronic annotation /// 0006979 // response to oxidative stress // non-traceable author statement /// 0008228 // opsonization // traceable author statement /// 0044130 // negative regulation of growth of symbiont in host // inferred from direct assay /// 0044130 // negative regulation of growth of symbiont in host // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation /// 0050766 // positive regulation of phagocytosis // inferred from electronic annotation /// 0050830 // defense response to Gram-positive bacterium // inferred from direct assay /// 0050830 // defense response to Gram-positive bacterium // inferred from electronic annotation /// 0051873 // killing by host of symbiont cells // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005581 // collagen // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement","0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0005537 // mannose binding // non-traceable author statement /// 0005537 // mannose binding // traceable author statement /// 0005537 // mannose binding // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation /// 0043499 // eukaryotic cell surface binding // traceable author statement /// 0048306 // calcium-dependent protein binding // inferred from physical interaction /// 0051635 // bacterial cell surface binding // traceable author statement","chr10:54526872-54531460 (-) // 30.64 // q21.1"]
["11733687_s_at",-0.07675934,-0.092535496,-0.030591965,0.13560486,0.033510685,0.030591965,0.28825644,0.027356563,-1.0967221,-0.13319804,1.0967221,"down","STRA6",64220.0,"0001568 // blood vessel development // inferred from mutant phenotype /// 0001822 // kidney development // inferred from mutant phenotype /// 0003184 // pulmonary valve morphogenesis // inferred from mutant phenotype /// 0003281 // ventricular septum development // inferred from mutant phenotype /// 0006810 // transport // inferred from electronic annotation /// 0007507 // heart development // inferred from mutant phenotype /// 0007612 // learning // inferred from mutant phenotype /// 0007631 // feeding behavior // inferred from mutant phenotype /// 0030324 // lung development // inferred from mutant phenotype /// 0030325 // adrenal gland development // inferred from mutant phenotype /// 0030540 // female genitalia development // inferred from mutant phenotype /// 0042297 // vocal learning // inferred from mutant phenotype /// 0043583 // ear development // inferred from mutant phenotype /// 0043585 // nose morphogenesis // inferred from mutant phenotype /// 0048286 // lung alveolus development // inferred from mutant phenotype /// 0048520 // positive regulation of behavior // inferred from mutant phenotype /// 0048546 // digestive tract morphogenesis // inferred from mutant phenotype /// 0048566 // embryonic digestive tract development // inferred from mutant phenotype /// 0048589 // developmental growth // inferred from mutant phenotype /// 0048745 // smooth muscle tissue development // inferred from mutant phenotype /// 0048844 // artery morphogenesis // inferred from mutant phenotype /// 0050890 // cognition // inferred from mutant phenotype /// 0050905 // neuromuscular process // inferred from mutant phenotype /// 0060322 // head development // inferred from mutant phenotype /// 0060323 // head morphogenesis // inferred from mutant phenotype /// 0060325 // face morphogenesis // inferred from mutant phenotype /// 0060426 // lung vasculature development // inferred from mutant phenotype /// 0060539 // diaphragm development // inferred from mutant phenotype /// 0060900 // embryonic camera-type eye formation // inferred from mutant phenotype /// 0061029 // eyelid development in camera-type eye // inferred from mutant phenotype /// 0061038 // uterus morphogenesis // inferred from mutant phenotype /// 0061143 // alveolar primary septum development // inferred from mutant phenotype /// 0061156 // pulmonary artery morphogenesis // inferred from mutant phenotype /// 0061205 // paramesonephric duct development // inferred from mutant phenotype","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay","0004872 // receptor activity // inferred from electronic annotation","chr15:74471809-74501371 (-) // 98.94 // q24.1"]
["11753634_a_at",0.034474373,0.045595646,0.015942097,-0.015942097,-0.15631056,-0.11703253,0.33206767,0.03962344,1.0931053,0.12843241,1.0931053,"up","MED24",9862.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // inferred from direct assay /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016573 // histone acetylation // inferred from electronic annotation /// 0030518 // intracellular steroid hormone receptor signaling pathway // inferred from direct assay /// 0030521 // androgen receptor signaling pathway // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0051291 // protein heterooligomerization // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0016592 // mediator complex // non-traceable author statement /// 0016592 // mediator complex // inferred from electronic annotation","0001104 // RNA polymerase II transcription cofactor activity // inferred from direct assay /// 0003712 // transcription cofactor activity // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from electronic annotation /// 0004402 // histone acetyltransferase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from direct assay /// 0004872 // receptor activity // inferred from electronic annotation /// 0030374 // ligand-dependent nuclear receptor transcription coactivator activity // non-traceable author statement /// 0042809 // vitamin D receptor binding // non-traceable author statement /// 0046966 // thyroid hormone receptor binding // inferred from direct assay","chr17:38175381-38209868 (-) // 91.84 // q21.1"]
["11749610_a_at",0.013682365,-0.003856659,0.027505875,-0.0018596649,-0.021152496,0.0018596649,0.5496692,0.16648385,1.0136044,0.019494696,1.0136044,"up","CD58",965.0,"0007155 // cell adhesion // non-traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0016337 // cell-cell adhesion // non-traceable author statement /// 0050900 // leukocyte migration // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031225 // anchored to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr1:117064059-117113661 (-) // 97.12 // p13.1"]
["11761354_at",0.056947708,-0.047932148,0.047968864,-0.063649654,-0.010732174,0.010732174,0.72225034,0.37364918,1.0282644,0.04021128,1.0282644,"up","LOC100289409",1.00289409E8,"","","","chr9:140475535-140476950 (+) // 100.0 // q34.3"]
["11763027_x_at",-0.19150877,-0.021436691,-0.2489667,0.033075333,0.076738834,0.021436691,0.35672498,0.048299965,-1.1468852,-0.19772093,1.1468852,"down","HFE",3077.0,"0002474 // antigen processing and presentation of peptide antigen via MHC class I // inferred from electronic annotation /// 0006461 // protein complex assembly // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006826 // iron ion transport // traceable author statement /// 0006879 // cellular iron ion homeostasis // traceable author statement /// 0006898 // receptor-mediated endocytosis // traceable author statement /// 0006955 // immune response // inferred from electronic annotation /// 0007565 // female pregnancy // inferred from electronic annotation /// 0010106 // cellular response to iron ion starvation // inferred from electronic annotation /// 0019882 // antigen processing and presentation // inferred from electronic annotation /// 0042446 // hormone biosynthetic process // inferred from electronic annotation /// 0055072 // iron ion homeostasis // inferred from electronic annotation /// 0060586 // multicellular organismal iron ion homeostasis // inferred from electronic annotation","0005737 // cytoplasm // traceable author statement /// 0005769 // early endosome // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from direct assay /// 0042612 // MHC class I protein complex // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from direct assay /// 0045177 // apical part of cell // inferred from electronic annotation /// 0045178 // basal part of cell // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0055037 // recycling endosome // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr6:26091323-26096817 (+) // 93.73 // p22.2"]
["11740048_a_at",0.0038063526,-0.090007305,0.06376529,-0.0038063526,0.028419733,-0.05281043,0.99159604,0.9715413,1.001332,0.0019204554,1.001332,"up","ZNF461",92283.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:37128282-37157755 (-) // 89.38 // q13.12"]
["11723752_s_at",0.028284311,-0.002550602,0.0462389,0.0024032593,-0.10664582,-0.0024032593,0.58133227,0.19523232,1.0421331,0.059539538,1.0421331,"up","MEOX2",4223.0,"0001525 // angiogenesis // inferred from electronic annotation /// 0001757 // somite specification // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007519 // skeletal muscle tissue development // inferred from electronic annotation /// 0008015 // blood circulation // traceable author statement /// 0060021 // palate development // inferred from electronic annotation /// 0060173 // limb development // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr7:15650838-15726435 (-) // 96.29 // p21.2"]
["11730786_a_at",0.0043387413,-0.04960394,0.10438299,0.036635876,-0.0043387413,-0.04470396,0.87631047,0.6636217,1.016663,0.023841474,1.016663,"up","KLHL20",27252.0,"0007010 // cytoskeleton organization // traceable author statement /// 0016567 // protein ubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0035455 // response to interferon-alpha // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0009986 // cell surface // inferred from direct assay /// 0015629 // actin cytoskeleton // traceable author statement /// 0016605 // PML body // inferred from direct assay /// 0031463 // Cul3-RING ubiquitin ligase complex // inferred from direct assay /// 0044444 // cytoplasmic part // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0019964 // interferon-gamma binding // inferred from direct assay","chr1:173684051-173755960 (+) // 99.12 // q25.1"]
["11744350_a_at",-0.08557415,-0.09214115,-0.046183586,0.04923153,0.046183586,0.08128643,0.11081357,0.0018449062,-1.0969771,-0.13353343,1.0969771,"down","RPS27L",51065.0,"0006281 // DNA repair // inferred from mutant phenotype /// 0006412 // translation // inferred from direct assay /// 0006412 // translation // inferred from electronic annotation /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0006974 // response to DNA damage stimulus // inferred from direct assay /// 0031571 // mitotic cell cycle G1/S transition DNA damage checkpoint // inferred from mutant phenotype /// 0042771 // DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis // inferred from direct assay /// 0045727 // positive regulation of translation // inferred from direct assay /// 0045768 // positive regulation of anti-apoptosis // inferred from mutant phenotype","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005840 // ribosome // inferred from electronic annotation /// 0022627 // cytosolic small ribosomal subunit // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008494 // translation activator activity // inferred from direct assay /// 0008656 // cysteine-type endopeptidase activator activity involved in apoptotic process // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr15:63446051-63449678 (-) // 76.62 // q22.2"]
["11758531_x_at",0.025321007,-0.031087875,-0.062763214,0.027094841,-0.025321007,0.027010918,0.7108356,0.35607257,-1.0227392,-0.032438263,1.0227392,"down","GALE",2582.0,"0005975 // carbohydrate metabolic process // traceable author statement /// 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006012 // galactose metabolic process // inferred from electronic annotation /// 0019388 // galactose catabolic process // inferred from direct assay /// 0019388 // galactose catabolic process // traceable author statement /// 0044237 // cellular metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement","0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0003978 // UDP-glucose 4-epimerase activity // not recorded /// 0003978 // UDP-glucose 4-epimerase activity // inferred from direct assay /// 0003978 // UDP-glucose 4-epimerase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation /// 0016857 // racemase and epimerase activity, acting on carbohydrates and derivatives // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0050662 // coenzyme binding // inferred from electronic annotation","chr1:24122099-24122669 (-) // 95.95 // p36.11"]
["11735614_at",-0.03023076,0.04523635,-0.0046799183,0.00467968,0.13531947,-0.03145528,0.8402426,0.5856078,-1.0229527,-0.032739405,1.0229527,"down","EGR4",1961.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:73518061-73520833 (-) // 99.0 // p13.1"]
["11753635_x_at",0.011786461,-0.049915314,-0.07941675,0.050799847,0.073308945,-0.011786461,0.47057694,0.10721687,-1.0545465,-0.07662268,1.0545465,"down","MED24",9862.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // inferred from direct assay /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016573 // histone acetylation // inferred from electronic annotation /// 0030518 // intracellular steroid hormone receptor signaling pathway // inferred from direct assay /// 0030521 // androgen receptor signaling pathway // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0051291 // protein heterooligomerization // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0016592 // mediator complex // non-traceable author statement /// 0016592 // mediator complex // inferred from electronic annotation","0001104 // RNA polymerase II transcription cofactor activity // inferred from direct assay /// 0003712 // transcription cofactor activity // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from electronic annotation /// 0004402 // histone acetyltransferase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from direct assay /// 0004872 // receptor activity // inferred from electronic annotation /// 0030374 // ligand-dependent nuclear receptor transcription coactivator activity // non-traceable author statement /// 0042809 // vitamin D receptor binding // non-traceable author statement /// 0046966 // thyroid hormone receptor binding // inferred from direct assay","chr17:38175381-38209868 (-) // 91.84 // q21.1"]
["11753963_x_at",0.0041208267,0.012464523,0.06690979,-0.047164917,-0.0041208267,-0.062716484,0.40039292,0.06692937,1.0466887,0.06583239,1.0466887,"up","LAMP1",3916.0,"0006914 // autophagy // inferred from electronic annotation /// 0048102 // autophagic cell death // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005764 // lysosome // inferred from direct assay /// 0005764 // lysosome // inferred from electronic annotation /// 0005764 // lysosome // traceable author statement /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from direct assay /// 0005770 // late endosome // inferred from electronic annotation /// 0005771 // multivesicular body // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031982 // vesicle // inferred from electronic annotation /// 0042383 // sarcolemma // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0042599 // lamellar body // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation","","chr13:113951555-113977740 (+) // 94.16 // q34"]
["11747262_s_at",0.09994459,-0.05112028,0.1658349,0.04095936,-0.040959835,-0.1108017,0.61975574,0.2354683,1.0780971,0.10848713,1.0780971,"up","RRAS2",22800.0,"0006184 // GTP catabolic process // traceable author statement /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007265 // Ras protein signal transduction // inferred from electronic annotation /// 0009987 // cellular process // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // non-traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation","chr11:14300227-14386052 (-) // 99.53 // p15.2"]
["11757933_s_at",-0.1580534,-0.14186573,-0.14268494,0.14186573,0.144351,0.2040348,0.052216124,1.2093228E-4,-1.240526,-0.31095192,1.240526,"down","BTG2",7832.0,"0006281 // DNA repair // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006479 // protein methylation // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0008306 // associative learning // inferred from electronic annotation /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0010243 // response to organic nitrogen // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0021542 // dentate gyrus development // inferred from electronic annotation /// 0021954 // central nervous system neuron development // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043434 // response to peptide hormone stimulus // inferred from electronic annotation /// 0045768 // positive regulation of anti-apoptosis // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0051602 // response to electrical stimulus // inferred from electronic annotation /// 0060213 // positive regulation of nuclear-transcribed mRNA poly(A) tail shortening // inferred from direct assay /// 2000178 // negative regulation of neural precursor cell proliferation // inferred from electronic annotation","","0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from electronic annotation","chr1:203278301-203278727 (+) // 98.38 // q32.1"]
["11755047_a_at",0.038575172,0.016141891,0.03024292,-0.016141891,-0.06404495,-0.067502975,0.21347962,0.012140182,1.0552244,0.07754985,1.0552244,"up","NPLOC4",55666.0,"0006944 // cellular membrane fusion // inferred from sequence or structural similarity /// 0006944 // cellular membrane fusion // inferred from electronic annotation /// 0007030 // Golgi organization // inferred from sequence or structural similarity /// 0007030 // Golgi organization // inferred from electronic annotation /// 0030433 // ER-associated protein catabolic process // inferred from sequence or structural similarity /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0042175 // nuclear outer membrane-endoplasmic reticulum membrane network // inferred from sequence or structural similarity","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:79523914-79539134 (-) // 91.87 // q25.3"]
["11718613_a_at",0.008811951,-0.13762236,0.09668589,-0.008811951,0.15272427,-0.08334494,0.9209447,0.76738864,-1.0216473,-0.030897273,1.0216473,"down","ABCD4",5826.0,"0006200 // ATP catabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0055085 // transmembrane transport // non-traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005777 // peroxisome // inferred from direct assay /// 0005777 // peroxisome // inferred from electronic annotation /// 0005778 // peroxisomal membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0043190 // ATP-binding cassette (ABC) transporter complex // non-traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // non-traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0042626 // ATPase activity, coupled to transmembrane movement of substances // non-traceable author statement /// 0042626 // ATPase activity, coupled to transmembrane movement of substances // inferred from electronic annotation","chr14:74751979-74769767 (-) // 94.11 // q24.3"]
["11736184_a_at",-0.102095604,0.0347085,-0.04488325,0.013262272,0.1288147,-0.013262272,0.6274984,0.24454486,-1.057283,-0.08036165,1.057283,"down","FSCB",84075.0,"0018105 // peptidyl-serine phosphorylation // inferred from electronic annotation","0005929 // cilium // inferred from electronic annotation /// 0019861 // flagellum // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0044442 // microtubule-based flagellum part // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr14:44973355-44976728 (-) // 99.09 // q21.2"]
["11734390_a_at",-0.0067224503,0.061259747,0.1415472,-0.11174297,0.0067224503,-0.11349106,0.4207673,0.07736428,1.1005301,0.13819866,1.1005301,"up","ABLIM2",84448.0,"0007010 // cytoskeleton organization // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0030016 // myofibril // inferred from electronic annotation /// 0045111 // intermediate filament cytoskeleton // inferred from direct assay","0003779 // actin binding // inferred from electronic annotation /// 0008270 // zinc ion binding // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr4:7967036-8160559 (-) // 96.11 // p16.1"]
["11732037_a_at",-0.004705429,-0.060456276,0.037965775,0.004705429,0.029423714,-0.11659813,0.9121542,0.7473036,1.0128527,0.018424332,1.0128527,"up","PTPN12",5782.0,"0006470 // protein dephosphorylation // traceable author statement /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation","0002102 // podosome // inferred from electronic annotation /// 0005625 // soluble fraction // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0030054 // cell junction // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0004726 // non-membrane spanning protein tyrosine phosphatase activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from physical interaction","chr7:77167351-77269388 (+) // 99.01 // q11.23"]
["11730362_a_at",-0.16864038,0.06782961,-0.06782961,-0.18195748,0.1187973,0.2172699,0.7881325,0.4799146,-1.0774219,-0.1075833,1.0774219,"down","KIAA1107",23285.0,"","","","chr1:92632608-92650284 (+) // 98.67 // p22.1"]
["11716191_at",-0.026765823,-0.026298523,-0.021183014,0.028440475,0.026666641,0.021183014,0.044616908,5.8851427E-5,-1.0353935,-0.05017913,1.0353935,"down","C15orf44",81556.0,"","0005737 // cytoplasm // inferred from direct assay","","chr15:65871094-65903486 (-) // 98.53 // q22.31"]
["11742708_a_at",0.0071048737,-0.0071048737,0.08890104,-0.03542137,-0.0098080635,0.1367464,0.9965234,0.98935133,-1.0006046,-8.7203237E-4,1.0006046,"down","P4HTM",54681.0,"0055114 // oxidation-reduction process // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005506 // iron ion binding // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016702 // oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen // inferred from electronic annotation /// 0016705 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen // inferred from electronic annotation /// 0016706 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors // inferred from electronic annotation /// 0031418 // L-ascorbic acid binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:49027340-49044548 (+) // 97.5 // p21.31"]
["11740584_x_at",0.0831995,0.019827843,-0.035171986,0.015324593,-0.074915886,-0.015324593,0.6956197,0.3330498,1.0335373,0.047590412,1.0335373,"up","PACRGL",133015.0,"","","","chr4:20702035-20729979 (+) // 83.56 // p15.31"]
["11740925_a_at",0.0890584,-0.042109728,-0.13626075,0.23403335,0.01791811,-0.01791811,0.7079135,0.3514304,-1.0775702,-0.10778186,1.0775702,"down","FAM151B",167555.0,"","","","chr5:79783799-79838381 (+) // 99.3 // q14.1"]
["11753900_x_at",0.028119087,-0.0074739456,0.07541466,-0.017853737,0.0074739456,-0.048978806,0.5305322,0.1489103,1.0365618,0.051806197,1.0365618,"up","MT2A",4502.0,"0006878 // cellular copper ion homeostasis // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0035690 // cellular response to drug // inferred from direct assay /// 0036016 // cellular response to interleukin-3 // inferred from expression pattern /// 0036018 // cellular response to erythropoietin // inferred from expression pattern /// 0045926 // negative regulation of growth // inferred from sequence or structural similarity /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0071294 // cellular response to zinc ion // inferred from expression pattern","0005634 // nucleus // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005829 // cytosol // traceable author statement /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity","0005515 // protein binding // inferred from physical interaction /// 0008144 // drug binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:56642564-56643409 (+) // 79.71 // q12.2"]
["11753591_x_at",-0.014279366,-0.026900291,0.0016040802,-0.0016040802,0.042693138,0.028961182,0.42098394,0.07751491,-1.0256524,-0.036541887,1.0256524,"down","PRR13",54458.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","0003723 // RNA binding // inferred from electronic annotation","chr12:53837173-53839992 (+) // 90.77 // q13.13 /// chr19:40448992-40449588 (-) // 93.12 // q13.2"]
["11739141_a_at",-0.017804146,-0.015852928,0.015852928,0.023789406,-0.041038036,0.026228905,0.90708435,0.73481745,-1.0062077,-0.008928142,1.0062077,"down","LILRB5",10990.0,"0006952 // defense response // traceable author statement /// 0007166 // cell surface receptor signaling pathway // traceable author statement","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // traceable author statement","chr19:54754270-54761472 (-) // 87.64 // q13.42"]
["11749804_a_at",0.16294718,0.030427694,-0.2454896,-0.030427694,0.064894915,-0.12849975,0.9753964,0.9211677,1.0097321,0.013972609,1.0097321,"up","CELF6",60677.0,"0000381 // regulation of alternative nuclear mRNA splicing, via spliceosome // inferred from direct assay /// 0006397 // mRNA processing // inferred from electronic annotation","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // non-traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation","chr15:72578245-72598656 (-) // 91.43 // q23"]
["11745984_a_at",-0.0151433945,0.06388664,0.0151433945,-0.034921646,0.050732613,-0.06765461,0.7471202,0.41174424,1.0271001,0.03857677,1.0271001,"up","SRRM1",10250.0,"0000375 // RNA splicing, via transesterification reactions // traceable author statement /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0031124 // mRNA 3'-end processing // traceable author statement","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016363 // nuclear matrix // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation","chr1:24970049-24999158 (+) // 92.44 // p36.11"]
["11763697_s_at",-0.006713867,0.041175842,-0.036038876,0.12113619,0.006713867,-0.074052334,0.92510253,0.77704453,-1.0128764,-0.018458122,1.0128764,"down","SNHG9 /// SNORA78","677844 /// 735301","","","","chr16:2014976-2015505 (+) // 63.57 // p13.3"]
["11715160_x_at",0.13871765,-0.021599531,-0.02952385,-0.03915906,0.021599531,0.22259068,0.893911,0.70497626,-1.0275052,-0.039145637,1.0275052,"down","LOC650293",650293.0,"0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr4:8951476-8952127 (+) // 100.0 // p16.1 /// chr4:9485511-9486162 (+) // 96.01 // p16.1 /// chr3:129740611-129741262 (-) // 95.39 // q22.1"]
["11763408_x_at",-0.044420242,-0.0022883415,0.028310776,0.021467686,-0.068664074,0.0022883415,0.93704635,0.81091785,1.0061439,0.008836695,1.0061439,"up","ANKRD36BP2",645784.0,"","","","chr2:89065418-89106133 (+) // 90.38 // p11.2"]
["11740844_s_at",-0.08436489,-0.0047922134,0.0047922134,0.06280041,-0.13844275,0.18135834,0.82477623,0.5513202,-1.0448967,-0.06336035,1.0448967,"down","VWDE",221806.0,"","0005576 // extracellular region // inferred from electronic annotation","","chr7:12370508-12443852 (-) // 100.0 // p21.3"]
["11736577_a_at",-0.10335016,-0.055702686,-0.009317875,0.06046915,0.009317398,0.10090065,0.33537784,0.040766284,-1.0814892,-0.113019265,1.0814892,"down","IRAK1BP1",134728.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007249 // I-kappaB kinase/NF-kappaB cascade // inferred from sequence or structural similarity /// 0007249 // I-kappaB kinase/NF-kappaB cascade // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","","chr6:79577188-79608320 (+) // 97.06 // q14.1"]
["11751497_a_at",-5.555153E-4,0.025629997,-5.555153E-4,-0.03538847,0.006925106,5.5503845E-4,0.6936757,0.33078098,1.0121869,0.017475687,1.0121869,"up","TMEM180",79847.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr10:104221159-104239484 (+) // 96.78 // q24.32"]
["11752223_x_at",-0.05862522,-0.033685684,-0.009719372,0.013012886,0.009719849,0.023033619,0.2927849,0.028383901,-1.0347381,-0.049265604,1.0347381,"down","POLH",5429.0,"0000731 // DNA synthesis involved in DNA repair // inferred from direct assay /// 0006260 // DNA replication // inferred from electronic annotation /// 0006281 // DNA repair // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006282 // regulation of DNA repair // traceable author statement /// 0006290 // pyrimidine dimer repair // inferred from electronic annotation /// 0006301 // postreplication repair // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0010225 // response to UV-C // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003684 // damaged DNA binding // inferred from electronic annotation /// 0003684 // damaged DNA binding // traceable author statement /// 0003887 // DNA-directed DNA polymerase activity // inferred from electronic annotation /// 0003887 // DNA-directed DNA polymerase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016779 // nucleotidyltransferase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:43543921-43582460 (+) // 95.21 // p21.1"]
["11730140_at",-0.2170453,0.102690935,-0.10269117,-0.17931342,0.15007305,0.1271267,0.79763174,0.49936154,-1.0754775,-0.10497732,1.0754775,"down","LGALS13",29124.0,"0006644 // phospholipid metabolic process // traceable author statement /// 0016042 // lipid catabolic process // inferred from electronic annotation","","0004091 // carboxylesterase activity // inferred from electronic annotation /// 0004622 // lysophospholipase activity // inferred from electronic annotation /// 0004622 // lysophospholipase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr19:40093159-40098114 (+) // 92.5 // q13.2"]
["11728581_at",-0.09403038,-0.0101184845,-0.0103776455,0.18348217,0.2133627,0.0101184845,0.39836428,0.06601903,-1.1280491,-0.17382991,1.1280491,"down","ZNF497",162968.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:58865722-58874120 (-) // 78.05 // q13.43"]
["11727219_a_at",-0.050334454,0.040874004,0.08939028,-0.10650778,0.02056694,-0.020567417,0.68978983,0.32542557,1.0440176,0.062145967,1.0440176,"up","DSE",29940.0,"0006334 // nucleosome assembly // inferred from electronic annotation /// 0015012 // heparan sulfate proteoglycan biosynthetic process // inferred from electronic annotation /// 0030206 // chondroitin sulfate biosynthetic process // inferred from electronic annotation /// 0030208 // dermatan sulfate biosynthetic process // inferred from direct assay","0005622 // intracellular // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0016853 // isomerase activity // inferred from electronic annotation /// 0047757 // chondroitin-glucuronate 5-epimerase activity // inferred from direct assay /// 0047757 // chondroitin-glucuronate 5-epimerase activity // inferred from electronic annotation","chr6:116601233-116759879 (+) // 96.85 // q22.1"]
["11753964_x_at",0.004787445,0.001493454,0.04214096,-0.056604385,-0.001493454,-0.0546093,0.41324762,0.073347814,1.0379304,0.05370966,1.0379304,"up","HSPH1",10808.0,"0006950 // response to stress // inferred from electronic annotation /// 0006986 // response to unfolded protein // traceable author statement /// 0045345 // positive regulation of MHC class I biosynthetic process // traceable author statement /// 0051085 // chaperone mediated protein folding requiring cofactor // inferred from electronic annotation /// 0051135 // positive regulation of NK T cell activation // traceable author statement","0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0043014 // alpha-tubulin binding // inferred from electronic annotation","chr13:31710764-31736525 (-) // 99.66 // q12.3"]
["11755549_a_at",0.034905434,-0.06799269,-0.034905434,-0.062453747,0.096839905,0.14136744,0.67374104,0.3036741,-1.0579333,-0.081248716,1.0579333,"down","SEMA6D",80031.0,"0006501 // C-terminal protein lipidation // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0016254 // preassembly of GPI anchor in ER membrane // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0030215 // semaphorin receptor binding // inferred from electronic annotation","chr15:48058309-48064407 (+) // 99.51 // q21.1"]
["11726007_s_at",0.06251335,-0.074145794,-0.06251335,-0.09543824,0.12015581,0.17243123,0.7299049,0.3855476,-1.0646886,-0.09043148,1.0646886,"down","DPY19L2 /// DPY19L2P1","283417 /// 554236","0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0007286 // spermatid development // inferred from mutant phenotype /// 0030154 // cell differentiation // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr12:63952692-64062417 (-) // 98.71 // q14.2"]
["11755604_x_at",-0.005592346,0.012031555,0.049271584,-0.003991127,0.0039920807,-0.0078125,0.6465459,0.26971808,1.014785,0.021174172,1.014785,"up","RPL7A /// SNORD24 /// SNORD36A /// SNORD36B","26814 /// 26815 /// 26820 /// 6130","0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral infectious cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0042254 // ribosome biogenesis // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement","0005624 // membrane fraction // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0042788 // polysomal ribosome // inferred from direct assay","0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0003735 // structural constituent of ribosome // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr9:136216864-136218280 (+) // 97.01 // q34.2 /// chr14:70351998-70352485 (-) // 88.25 // q24.2 /// chr18:36914780-36915264 (-) // 88.05 // q12.2"]
["11717101_a_at",-0.10115862,-0.089818,-0.032280445,0.24032879,0.03227997,0.18271208,0.28397498,0.026077751,-1.1697439,-0.2261927,1.1697439,"down","SLC38A1",81539.0,"0001504 // neurotransmitter uptake // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006811 // ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0006865 // amino acid transport // traceable author statement /// 0006865 // amino acid transport // inferred from electronic annotation /// 0006868 // glutamine transport // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0015804 // neutral amino acid transport // non-traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0005624 // membrane fraction // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation","0005283 // sodium:amino acid symporter activity // non-traceable author statement /// 0015175 // neutral amino acid transmembrane transporter activity // non-traceable author statement /// 0015186 // L-glutamine transmembrane transporter activity // inferred from electronic annotation /// 0015293 // symporter activity // inferred from electronic annotation","chr12:46576837-46663220 (-) // 93.32 // q13.11"]
["11746469_x_at",0.017532349,8.201599E-5,0.051080704,-0.032557487,-8.201599E-5,-0.069667816,0.43458274,0.085303664,1.0403008,0.057000805,1.0403008,"up","DARS",1615.0,"0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006418 // tRNA aminoacylation for protein translation // traceable author statement /// 0006418 // tRNA aminoacylation for protein translation // inferred from electronic annotation /// 0006422 // aspartyl-tRNA aminoacylation // inferred from electronic annotation /// 0006422 // aspartyl-tRNA aminoacylation // traceable author statement /// 0006461 // protein complex assembly // traceable author statement /// 0010467 // gene expression // traceable author statement","0005625 // soluble fraction // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0004046 // aminoacylase activity // traceable author statement /// 0004812 // aminoacyl-tRNA ligase activity // inferred from electronic annotation /// 0004815 // aspartate-tRNA ligase activity // inferred from electronic annotation /// 0004815 // aspartate-tRNA ligase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation","chr2:136664253-136743117 (-) // 92.94 // q21.3"]
["11730223_a_at",-0.2285161,0.08068037,-0.141078,0.19391823,-0.08067989,0.15137005,0.6029874,0.21544944,-1.1364288,-0.18450734,1.1364288,"down","PNPLA2",57104.0,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0010891 // negative regulation of sequestering of triglyceride // inferred from direct assay /// 0010891 // negative regulation of sequestering of triglyceride // inferred from electronic annotation /// 0010898 // positive regulation of triglyceride catabolic process // inferred from direct assay /// 0010898 // positive regulation of triglyceride catabolic process // inferred from electronic annotation /// 0016042 // lipid catabolic process // inferred from electronic annotation /// 0019433 // triglyceride catabolic process // inferred from electronic annotation","0005811 // lipid particle // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004806 // triglyceride lipase activity // inferred from sequence or structural similarity /// 0004806 // triglyceride lipase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0050253 // retinyl-palmitate esterase activity // inferred from electronic annotation","chr11:818900-825573 (+) // 97.51 // p15.5"]
["11747504_a_at",-0.14542294,-0.23625183,0.06783104,0.04213333,0.15308714,-0.04213333,0.60450363,0.21728843,-1.1139184,-0.15564358,1.1139184,"down","ZNF510",22869.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:99520365-99540398 (-) // 91.69 // q22.33"]
["11754660_a_at",0.17257929,0.0041399,-0.1261909,-0.0041401386,-0.012526035,0.16163564,0.92465127,0.77599764,-1.0220604,-0.031480446,1.0220604,"down","GOLT1A",127845.0,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr1:204167290-204183110 (-) // 93.22 // q32.1"]
["11736487_at",0.061368465,1.7023087E-4,-0.04780054,0.0988605,-1.7023087E-4,-0.12337875,0.95679444,0.86676145,1.0089179,0.01280882,1.0089179,"up","RASGEF1B",153020.0,"0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from electronic annotation","0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005088 // Ras guanyl-nucleotide exchange factor activity // inferred from direct assay","chr4:82348176-82393069 (-) // 98.93 // q21.21"]
["11741817_a_at",-0.012870073,-0.034757137,0.020501137,-0.057996035,0.13882828,0.012870073,0.8172942,0.5372476,-1.0283107,-0.040276174,1.0283107,"down","SLC12A5",57468.0,"0006810 // transport // non-traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006811 // ion transport // inferred from electronic annotation /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0006821 // chloride transport // inferred from electronic annotation /// 0006873 // cellular ion homeostasis // non-traceable author statement /// 0007268 // synaptic transmission // inferred from electronic annotation /// 0007612 // learning // inferred from electronic annotation /// 0015696 // ammonium transport // inferred from electronic annotation /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0040040 // thermosensory behavior // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0051452 // intracellular pH reduction // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0032590 // dendrite membrane // inferred from electronic annotation /// 0043204 // perikaryon // inferred from electronic annotation","0015293 // symporter activity // inferred from electronic annotation /// 0015377 // cation:chloride symporter activity // inferred from electronic annotation /// 0015379 // potassium:chloride symporter activity // inferred from electronic annotation /// 0015379 // potassium:chloride symporter activity // non-traceable author statement /// 0051739 // ammonia transmembrane transporter activity // inferred from electronic annotation","chr20:44650328-44688789 (+) // 98.22 // q13.12"]
["11731253_a_at",0.07875538,0.042639732,0.1366911,-0.042639732,-0.04543209,-0.0709486,0.1842613,0.00851269,1.1011688,0.13903557,1.1011688,"up","C16orf13",84326.0,"","","","chr16:684429-686366 (-) // 85.2 // p13.3"]
["11758045_s_at",0.012891769,0.058428764,0.1094923,-0.0493412,-0.012891769,-0.048199177,0.31000346,0.032967847,1.0696076,0.09708164,1.0696076,"up","KIAA1804",84451.0,"0000165 // MAPK cascade // inferred from electronic annotation /// 0000186 // activation of MAPKK activity // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from sequence or structural similarity /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007257 // activation of JUN kinase activity // inferred from sequence or structural similarity /// 0016310 // phosphorylation // inferred from electronic annotation /// 0046777 // protein autophosphorylation // inferred from sequence or structural similarity","","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004709 // MAP kinase kinase kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from sequence or structural similarity","chr1:233520499-233521070 (+) // 98.95 // q42.2"]
["11743422_a_at",0.06445837,-0.012000561,0.11885929,-0.042310715,-0.011566162,0.011566162,0.54174614,0.1577129,1.050597,0.071209304,1.050597,"up","BAG4",9530.0,"0006457 // protein folding // traceable author statement /// 0006916 // anti-apoptosis // traceable author statement /// 0010763 // positive regulation of fibroblast migration // inferred from electronic annotation /// 0030838 // positive regulation of actin filament polymerization // inferred from electronic annotation /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from electronic annotation /// 0045785 // positive regulation of cell adhesion // inferred from electronic annotation /// 0051496 // positive regulation of stress fiber assembly // inferred from electronic annotation /// 0051897 // positive regulation of protein kinase B signaling cascade // inferred from electronic annotation /// 0071356 // cellular response to tumor necrosis factor // inferred from direct assay /// 0071364 // cellular response to epidermal growth factor stimulus // inferred from electronic annotation /// 0072659 // protein localization in plasma membrane // inferred from electronic annotation /// 0097178 // ruffle assembly // inferred from electronic annotation /// 2001145 // negative regulation of phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay","0005057 // receptor signaling protein activity // traceable author statement /// 0051087 // chaperone binding // inferred from electronic annotation","chr8:38034105-38070819 (+) // 83.7 // p11.23"]
["11734486_a_at",0.0673604,0.20475054,-0.088383675,-0.0673604,0.12422371,-0.14849329,0.78703237,0.47687197,1.0656885,0.09178579,1.0656885,"up","WFDC8",90199.0,"0010466 // negative regulation of peptidase activity // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation","chr20:44180400-44207965 (-) // 81.89 // q13.12"]
["11726849_at",0.016685486,-0.09178734,0.022045135,-0.016685486,-0.08539629,0.043165684,0.9918982,0.97209835,1.0013547,0.0019530882,1.0013547,"up","SHC4",399694.0,"0035556 // intracellular signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0019904 // protein domain specific binding // inferred from electronic annotation /// 0030971 // receptor tyrosine kinase binding // inferred from electronic annotation","chr15:49115931-49255662 (-) // 95.64 // q21.1"]
["11722718_a_at",0.025804043,0.020902634,-0.021514893,-0.15515947,-0.020902157,0.054307938,0.7887473,0.4808013,1.0345346,0.04898186,1.0345346,"up","BAIAP2",10458.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007409 // axonogenesis // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0009617 // response to bacterium // inferred from mutant phenotype /// 0016358 // dendrite development // inferred from electronic annotation /// 0032956 // regulation of actin cytoskeleton organization // inferred from mutant phenotype /// 0046847 // filopodium assembly // inferred from electronic annotation /// 0048167 // regulation of synaptic plasticity // inferred from electronic annotation /// 0051017 // actin filament bundle assembly // inferred from electronic annotation","0001726 // ruffle // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from direct assay /// 0030175 // filopodium // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // traceable author statement /// 0008093 // cytoskeletal adaptor activity // inferred from electronic annotation /// 0008093 // cytoskeletal adaptor activity // traceable author statement /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0070064 // proline-rich region binding // inferred from direct assay","chr17:79008946-79084378 (+) // 98.74 // q25.3"]
["11751529_a_at",-0.12909079,0.030125141,0.01630783,-0.0054593086,0.0054593086,-0.009328365,0.8737949,0.6574866,-1.017087,-0.024443066,1.017087,"down","TF",7018.0,"0002576 // platelet degranulation // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006826 // iron ion transport // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // traceable author statement /// 0006879 // cellular iron ion homeostasis // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0033572 // transferrin transport // traceable author statement /// 0055072 // iron ion homeostasis // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005769 // early endosome // inferred from direct assay /// 0005770 // late endosome // inferred from direct assay /// 0005905 // coated pit // inferred from direct assay /// 0009925 // basal plasma membrane // inferred from direct assay /// 0010008 // endosome membrane // traceable author statement /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from direct assay /// 0016324 // apical plasma membrane // inferred from direct assay /// 0030139 // endocytic vesicle // inferred from direct assay /// 0030141 // secretory granule // traceable author statement /// 0045178 // basal part of cell // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0055037 // recycling endosome // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008199 // ferric iron binding // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:133465076-133474655 (+) // 98.02 // q22.1"]
["11748428_a_at",-0.010890961,0.05898857,0.10131264,-0.07363415,0.010890961,-0.012586594,0.5236023,0.1438183,1.0532978,0.07491333,1.0532978,"up","PGS1",9489.0,"0006655 // phosphatidylglycerol biosynthetic process // inferred from sequence or structural similarity /// 0006655 // phosphatidylglycerol biosynthetic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008654 // phospholipid biosynthetic process // inferred from electronic annotation /// 0032049 // cardiolipin biosynthetic process // inferred from sequence or structural similarity /// 0046339 // diacylglycerol metabolic process // inferred from sequence or structural similarity","0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from sequence or structural similarity /// 0005524 // ATP binding // inferred from electronic annotation /// 0008444 // CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity // inferred from sequence or structural similarity /// 0008444 // CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016780 // phosphotransferase activity, for other substituted phosphate groups // inferred from electronic annotation","chr17:76374742-76420638 (+) // 95.23 // q25.3"]
["11730053_a_at",-0.05204034,0.0520401,0.058528185,-0.06803179,0.08275914,-0.08376002,0.8204862,0.5430137,1.0299114,0.04252023,1.0299114,"up","SNX16",64089.0,"0006622 // protein targeting to lysosome // inferred from mutant phenotype /// 0006810 // transport // inferred from electronic annotation /// 0007154 // cell communication // inferred from electronic annotation /// 0008333 // endosome to lysosome transport // inferred from mutant phenotype /// 0015031 // protein transport // inferred from electronic annotation /// 0045022 // early endosome to late endosome transport // inferred from mutant phenotype","0005737 // cytoplasm // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0005770 // late endosome // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0031313 // extrinsic to endosome membrane // inferred from direct assay /// 0031901 // early endosome membrane // inferred from electronic annotation /// 0031902 // late endosome membrane // inferred from electronic annotation","0008289 // lipid binding // inferred from electronic annotation /// 0035091 // phosphatidylinositol binding // inferred from direct assay /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction","chr8:82711819-82754534 (-) // 97.34 // q21.13"]
["11728943_at",0.036079645,0.0,-0.036079407,0.09492779,0.0,-0.08320999,0.9847063,0.9472888,-1.002711,-0.003905937,1.002711,"down","ZNF404",342908.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:44376514-44384355 (-) // 94.06 // q13.31"]
["11736931_s_at",0.119460106,0.10198307,0.13511181,-0.3461132,-0.38084316,-0.10198307,0.20468429,0.011012797,1.315093,0.39516488,1.315093,"up","FAM72A /// FAM72B /// FAM72D","653820 /// 728833 /// 729533","","","","chr1:206138454-206155147 (+) // 96.15 // q32.1 /// chr1:120838982-120855680 (+) // 95.74 // p11.2 /// chr1:143896451-143913145 (-) // 95.7 // q21.1"]
["11727185_at",0.14448833,0.04262972,-0.2199974,0.04684353,-0.10408306,-0.04262972,0.95321304,0.8580364,1.0155983,0.02232988,1.0155983,"up","CCDC164",92749.0,"","","","chr2:26624779-26679579 (+) // 92.46 // p23.3"]
["11742191_a_at",0.018278122,-0.09597111,-0.018278599,0.11590576,-0.06559229,0.04654646,0.71570444,0.36320525,-1.045561,-0.06427717,1.045561,"down","LOC100506403 /// RUNX1","100506403 /// 861","0001501 // skeletal system development // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0002318 // myeloid progenitor cell differentiation // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007417 // central nervous system development // inferred from electronic annotation /// 0009966 // regulation of signal transduction // inferred from electronic annotation /// 0030097 // hemopoiesis // inferred from direct assay /// 0030097 // hemopoiesis // traceable author statement /// 0030099 // myeloid cell differentiation // inferred from direct assay /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0030853 // negative regulation of granulocyte differentiation // inferred from mutant phenotype /// 0030854 // positive regulation of granulocyte differentiation // inferred from mutant phenotype /// 0031069 // hair follicle morphogenesis // inferred from electronic annotation /// 0035162 // embryonic hemopoiesis // inferred from electronic annotation /// 0045766 // positive regulation of angiogenesis // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048266 // behavioral response to pain // inferred from electronic annotation /// 0048666 // neuron development // inferred from electronic annotation /// 0048935 // peripheral nervous system neuron development // traceable author statement /// 0060216 // definitive hemopoiesis // inferred from electronic annotation /// 0071336 // regulation of hair follicle cell proliferation // inferred from electronic annotation /// 0071425 // hemopoietic stem cell proliferation // traceable author statement","0005604 // basement membrane // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0000975 // regulatory region DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // non-traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from direct assay /// 0070491 // repressing transcription factor binding // inferred from electronic annotation","chr21:36160097-36421595 (-) // 94.77 // q22.12"]
["11718505_s_at",0.005320549,-0.022447586,0.054311752,0.024845123,-0.005320549,-0.008286476,0.91120696,0.7449619,1.0060129,0.008648829,1.0060129,"up","SRSF10",10772.0,"0000244 // assembly of spliceosomal tri-snRNP // non-traceable author statement /// 0000375 // RNA splicing, via transesterification reactions // inferred from direct assay /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006376 // mRNA splice site selection // inferred from direct assay /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // non-traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0016482 // cytoplasmic transport // inferred from direct assay /// 0048025 // negative regulation of nuclear mRNA splicing, via spliceosome // inferred from direct assay","0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // non-traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0050733 // RS domain binding // non-traceable author statement /// 0051082 // unfolded protein binding // non-traceable author statement","chr1:24290836-24306885 (-) // 85.86 // p36.11 /// chr1_gl000191_random:34172-50213 (-) // 85.84 //"]
["11745642_at",-0.039181232,0.087059736,0.12618732,-0.041118145,0.03918147,-0.0949049,0.6125039,0.22688688,1.0645933,0.09030241,1.0645933,"up",-0.041118145,0.03918147,-0.0949049,-0.039181232,0.087059736,0.12618732]
["11723900_a_at",0.13718891,0.23802757,0.057253838,-0.05725336,-0.26512384,-0.075344086,0.30167732,0.030744886,1.2114464,0.27673057,1.2114464,"up","KIAA2018",205717.0,"","0005634 // nucleus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0004571 // mannosyl-oligosaccharide 1,2-alpha-mannosidase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation","chr3:113367231-113415493 (-) // 92.86 // q13.2"]
["11740912_a_at",-0.023759127,0.17408204,0.008885622,-0.008885622,-0.025750637,0.08111763,0.85542005,0.6181412,1.0263877,0.037575774,1.0263877,"up","BANK1",55024.0,"0042113 // B cell activation // inferred from electronic annotation","","","chr4:102711763-102995967 (+) // 96.99 // q24"]
["11750271_a_at",-0.022463799,0.022463799,-0.14745426,-0.036031246,0.12996101,0.055299282,0.61587447,0.23011509,-1.0709524,-0.09889438,1.0709524,"down","PANX2",56666.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0007267 // cell-cell signaling // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0034214 // protein hexamerization // inferred from sequence or structural similarity","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005921 // gap junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005243 // gap junction channel activity // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0055077 // gap junction hemi-channel activity // inferred from sequence or structural similarity","chr22:50609189-50618032 (+) // 99.6 // q13.33"]
["11755858_a_at",-0.11324024,0.011947632,0.17112827,-0.05337763,-0.011947632,0.06395435,0.93449366,0.803254,1.0165883,0.023735575,1.0165883,"up","MS4A1",931.0,"0006955 // immune response // traceable author statement /// 0042113 // B cell activation // inferred from electronic annotation","0005730 // nucleolus // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005154 // epidermal growth factor receptor binding // inferred from electronic annotation","chr11:60223319-60237529 (+) // 88.88 // q12.2"]
["11720548_at",0.14747953,0.13345766,0.061224937,-0.21822834,-0.061224937,-0.13847303,0.18460888,0.008552203,1.1919823,0.25336277,1.1919823,"up","HNRNPUL2",221092.0,"","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation","chr11:62481387-62494933 (-) // 93.64 // q12.3"]
["11742751_a_at",-0.18985939,0.052867413,0.0023515224,0.060718298,-0.15816092,-0.0023517609,0.9721287,0.9117972,-1.0080837,-0.011615431,1.0080837,"down","ITIH3",3699.0,"0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // traceable author statement /// 0030212 // hyaluronan metabolic process // inferred from electronic annotation","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation","0004866 // endopeptidase inhibitor activity // traceable author statement /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation","chr3:52828809-52843025 (+) // 98.85 // p21.1"]
["11745143_a_at",7.185936E-4,0.06338215,0.21916533,-7.185936E-4,-0.31577778,-0.16601276,0.4330421,0.08446316,1.1935495,0.2552584,1.1935495,"up","SYNE2",23224.0,"0006998 // nuclear envelope organization // inferred from electronic annotation /// 0007097 // nuclear migration // inferred from mutant phenotype /// 0007163 // establishment or maintenance of cell polarity // inferred from electronic annotation /// 0010761 // fibroblast migration // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from sequence or structural similarity /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0031022 // nuclear migration along microfilament // inferred from sequence or structural similarity /// 0031022 // nuclear migration along microfilament // inferred from electronic annotation /// 0034504 // protein localization to nucleus // inferred from electronic annotation /// 0051642 // centrosome localization // inferred from mutant phenotype /// 0051642 // centrosome localization // inferred from electronic annotation /// 0090286 // cytoskeletal anchoring at nuclear membrane // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from direct assay /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005640 // nuclear outer membrane // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016529 // sarcoplasmic reticulum // inferred from direct assay /// 0016529 // sarcoplasmic reticulum // inferred from electronic annotation /// 0030016 // myofibril // inferred from electronic annotation /// 0030018 // Z disc // inferred from direct assay /// 0030018 // Z disc // inferred from electronic annotation /// 0031258 // lamellipodium membrane // inferred from direct assay /// 0031527 // filopodium membrane // inferred from direct assay /// 0031965 // nuclear membrane // inferred from direct assay /// 0031981 // nuclear lumen // inferred from direct assay /// 0033017 // sarcoplasmic reticulum membrane // inferred from electronic annotation /// 0034993 // SUN-KASH complex // inferred from direct assay /// 0044429 // mitochondrial part // inferred from direct assay","0003779 // actin binding // inferred from electronic annotation /// 0003779 // actin binding // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction","chr14:64319709-64427595 (+) // 82.41 // q23.2"]
["11743159_x_at",0.0497818,-0.057189465,0.10164356,-0.004878998,0.004878998,-0.067712545,0.71255,0.35784626,1.038127,0.053982873,1.038127,"up","FGG",2266.0,"0002576 // platelet degranulation // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0007596 // blood coagulation // inferred from electronic annotation /// 0007599 // hemostasis // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0030168 // platelet activation // inferred from electronic annotation /// 0051258 // protein polymerization // inferred from electronic annotation /// 0051592 // response to calcium ion // inferred from direct assay","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005577 // fibrinogen complex // inferred from electronic annotation /// 0005577 // fibrinogen complex // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005938 // cell cortex // inferred from electronic annotation /// 0009897 // external side of plasma membrane // inferred from direct assay /// 0031091 // platelet alpha granule // inferred from direct assay /// 0031093 // platelet alpha granule lumen // traceable author statement","0005102 // receptor binding // inferred from electronic annotation /// 0030674 // protein binding, bridging // inferred from electronic annotation /// 0043499 // eukaryotic cell surface binding // inferred from direct assay","chr4:155525732-155533902 (-) // 99.55 // q31.3"]
["11757377_a_at",-0.061472654,0.004475832,0.11337948,-0.004475832,0.057828903,-0.2790208,0.77721566,0.46079078,1.0673378,0.094016775,1.0673378,"up","DNAH14",127602.0,"0007018 // microtubule-based movement // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0030286 // dynein complex // inferred from electronic annotation /// 0035085 // cilium axoneme // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003774 // motor activity // inferred from electronic annotation /// 0003777 // microtubule motor activity // inferred from electronic annotation /// 0003777 // microtubule motor activity // non-traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation","chr1:225576157-225587057 (+) // 93.16 // q42.12"]
["11758516_s_at",-0.016141891,-0.0073919296,0.12051773,-0.04931307,0.0073919296,0.054570198,0.8597406,0.6264851,1.0196766,0.028111612,1.0196766,"up","PTCD3",55037.0,"","0005739 // mitochondrion // inferred from electronic annotation","","chr2:86366899-86367349 (+) // 91.56 // p11.2"]
["11718336_x_at",0.07214165,0.11553955,-0.1886549,-0.22250748,0.15010357,-0.07214165,0.9160225,0.75632554,1.0337285,0.047857296,1.0337285,"up","LMOD1",25802.0,"0006936 // muscle contraction // traceable author statement","0005624 // membrane fraction // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0005523 // tropomyosin binding // inferred from electronic annotation","chr1:201865583-201915792 (-) // 90.85 // q32.1"]
["11733406_a_at",-0.08049536,0.052677155,-0.10176468,0.073847294,0.05900812,-0.05267763,0.6913635,0.3271964,-1.0496587,-0.06992025,1.0496587,"down","CLDN19",149461.0,"0007601 // visual perception // inferred from electronic annotation /// 0016338 // calcium-independent cell-cell adhesion // inferred from sequence or structural similarity /// 0019227 // neuronal action potential propagation // inferred from electronic annotation /// 0043297 // apical junction assembly // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005923 // tight junction // inferred from direct assay /// 0005923 // tight junction // inferred from sequence or structural similarity /// 0005923 // tight junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from direct assay /// 0030054 // cell junction // inferred from electronic annotation /// 0043296 // apical junction complex // inferred from direct assay","0005198 // structural molecule activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from sequence or structural similarity","chr1:43198760-43205925 (-) // 85.88 // p34.2"]
["11756280_a_at",0.037679672,7.8582764E-4,0.04603386,-7.8582764E-4,-0.03181076,-0.005475998,0.41312322,0.073238835,1.0287249,0.04085724,1.0287249,"up","NUDT5",11164.0,"0006139 // nucleobase-containing compound metabolic process // inferred from electronic annotation /// 0009117 // nucleotide metabolic process // non-traceable author statement /// 0009191 // ribonucleoside diphosphate catabolic process // inferred from direct assay /// 0009191 // ribonucleoside diphosphate catabolic process // traceable author statement /// 0019303 // D-ribose catabolic process // non-traceable author statement","0005622 // intracellular // non-traceable author statement","0000287 // magnesium ion binding // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0017110 // nucleoside-diphosphatase activity // inferred from electronic annotation /// 0019144 // ADP-sugar diphosphatase activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047631 // ADP-ribose diphosphatase activity // inferred from electronic annotation","chr10:12209628-12238128 (-) // 99.47 // p13"]
["11739892_a_at",-0.18267679,0.031394005,-0.22185802,0.04604101,0.012939453,-0.012939453,0.54174614,0.15775448,-1.1016968,-0.1397273,1.1016968,"down","ARPC4-TTLL3 /// TTLL3","100526693 /// 26140","0006464 // cellular protein modification process // inferred from electronic annotation /// 0018094 // protein polyglycylation // inferred from direct assay /// 0030041 // actin filament polymerization // inferred from electronic annotation /// 0035082 // axoneme assembly // inferred from sequence or structural similarity /// 0042384 // cilium assembly // inferred from sequence or structural similarity","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005929 // cilium // inferred from sequence or structural similarity /// 0005929 // cilium // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from sequence or structural similarity /// 0035085 // cilium axoneme // inferred from sequence or structural similarity /// 0035085 // cilium axoneme // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0004835 // tubulin-tyrosine ligase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0070735 // protein-glycine ligase activity // inferred from direct assay /// 0070736 // protein-glycine ligase activity, initiating // inferred from sequence or structural similarity","chr3:9851671-9878042 (+) // 84.87 // p25.3"]
["11750735_a_at",-0.02595377,-0.03382492,0.2232647,0.02595377,-0.092570305,0.140275,0.9313555,0.7951639,1.0209714,0.029942477,1.0209714,"up","COMP",1311.0,"0001501 // skeletal system development // traceable author statement /// 0003417 // growth plate cartilage development // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from direct assay /// 0007155 // cell adhesion // inferred from electronic annotation /// 0009887 // organ morphogenesis // traceable author statement /// 0060173 // limb development // inferred from direct assay","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0031012 // extracellular matrix // inferred from direct assay","0005201 // extracellular matrix structural constituent // traceable author statement /// 0005509 // calcium ion binding // inferred from direct assay /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005509 // calcium ion binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005518 // collagen binding // inferred from direct assay /// 0008201 // heparin binding // inferred from direct assay /// 0008201 // heparin binding // inferred from electronic annotation /// 0043395 // heparan sulfate proteoglycan binding // inferred from direct assay","chr19:18893583-18902114 (-) // 99.83 // p13.11"]
["11740044_x_at",0.047952652,-0.024765015,0.024765015,-0.046076298,0.060997963,-0.097259045,0.76688415,0.4450707,1.0305611,0.043430027,1.0305611,"up","MTFMT",123263.0,"0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred from electronic annotation /// 0009058 // biosynthetic process // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation /// 0071951 // conversion of methionyl-tRNA to N-formyl-methionyl-tRNA // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004479 // methionyl-tRNA formyltransferase activity // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016742 // hydroxymethyl-, formyl- and related transferase activity // inferred from electronic annotation","chr15:65293850-65321976 (-) // 65.72 // q22.31"]
["11732704_a_at",0.04894066,0.006947994,-0.014829636,-0.0069475174,0.12937927,-0.016813755,0.88857806,0.6933486,-1.0150281,-0.021519694,1.0150281,"down","FGFRL1",53834.0,"0001501 // skeletal system development // inferred from electronic annotation /// 0001558 // regulation of cell growth // non-traceable author statement /// 0003179 // heart valve morphogenesis // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from direct assay /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from electronic annotation /// 0060412 // ventricular septum morphogenesis // inferred from electronic annotation /// 0060539 // diaphragm development // inferred from electronic annotation","0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005007 // fibroblast growth factor-activated receptor activity // inferred from direct assay /// 0005007 // fibroblast growth factor-activated receptor activity // inferred from electronic annotation /// 0008201 // heparin binding // inferred from direct assay /// 0017134 // fibroblast growth factor binding // inferred from electronic annotation","chr4:1004939-1020686 (+) // 78.35 // p16.3"]
["11729412_x_at",-0.0046195984,0.0046195984,0.119202614,0.017505646,-0.036725044,-0.07490826,0.59979516,0.21266939,1.0505247,0.0711101,1.0505247,"up","C9orf142",286257.0,"","","","chr9:139886894-139888439 (+) // 85.3 // q34.3"]
["11751166_a_at",0.034519672,0.08184004,-0.15106106,-0.034519672,0.08660412,-0.14425898,0.9513713,0.8537311,1.0133677,0.019157683,1.0133677,"up","TRIM5",85363.0,"0009615 // response to virus // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0070206 // protein trimerization // inferred from direct assay","0000932 // cytoplasmic mRNA processing body // inferred from direct assay /// 0000932 // cytoplasmic mRNA processing body // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:5686479-5701462 (-) // 80.7 // p15.4"]
["11730283_at",0.0035264492,-0.0075540543,-0.0113015175,0.17793417,0.11292124,-0.0035262108,0.5053623,0.13114399,-1.0724319,-0.10088607,1.0724319,"down","SMU1",55234.0,"","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","","chr9:33041761-33076718 (-) // 77.43 // p21.1"]
["11742022_s_at",0.3113923,0.088680506,-0.096769094,0.05886841,-0.05886841,-0.1659267,0.6781242,0.3100467,1.1145104,0.1564101,1.1145104,"up","IKZF1",10320.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001779 // natural killer cell differentiation // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007498 // mesoderm development // traceable author statement /// 0016568 // chromatin modification // inferred from electronic annotation /// 0030097 // hemopoiesis // inferred from electronic annotation /// 0030183 // B cell differentiation // inferred from electronic annotation /// 0030217 // T cell differentiation // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation /// 0040018 // positive regulation of multicellular organism growth // inferred from electronic annotation /// 0045660 // positive regulation of neutrophil differentiation // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048535 // lymph node development // inferred from electronic annotation /// 0048538 // thymus development // inferred from electronic annotation /// 0048541 // Peyer's patch development // inferred from electronic annotation /// 0048732 // gland development // inferred from electronic annotation /// 0051138 // positive regulation of NK T cell differentiation // inferred from electronic annotation /// 0060041 // retina development in camera-type eye // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005721 // centromeric heterochromatin // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr7:50344377-50472799 (+) // 96.31 // p12.2"]
["11732579_s_at",-0.035198927,0.08992052,-0.015577316,0.015577316,0.24813557,-0.12879753,0.932181,0.7975854,-1.0223744,-0.031923603,1.0223744,"down","ZNF880",400713.0,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:52873179-52889048 (+) // 98.09 // q13.41"]
["11715166_at",0.002583027,-0.03349161,0.09028292,-0.06787205,0.021510124,-0.002583027,0.7833983,0.4712126,1.0253428,0.03610635,1.0253428,"up","DNAJC12",56521.0,"0006457 // protein folding // inferred from electronic annotation","","0031072 // heat shock protein binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // inferred from electronic annotation","chr10:69570967-69597937 (-) // 99.11 // q21.3"]
["11743546_a_at",0.08686447,-0.0040864944,0.09836006,-0.0021820068,0.0021820068,-0.017763138,0.48370215,0.114628546,1.0470283,0.066300444,1.0470283,"up","MYO1B",4430.0,"0030048 // actin filament-based movement // inferred from sequence or structural similarity /// 0051017 // actin filament bundle assembly // inferred from sequence or structural similarity","0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005903 // brush border // inferred from sequence or structural similarity /// 0005903 // brush border // inferred from electronic annotation /// 0016459 // myosin complex // inferred from electronic annotation /// 0030175 // filopodium // inferred from sequence or structural similarity /// 0071944 // cell periphery // inferred from sequence or structural similarity","0000146 // microfilament motor activity // inferred from sequence or structural similarity /// 0000166 // nucleotide binding // inferred from electronic annotation /// 0003774 // motor activity // inferred from electronic annotation /// 0003779 // actin binding // inferred from electronic annotation /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from sequence or structural similarity /// 0005524 // ATP binding // inferred from electronic annotation /// 0005546 // phosphatidylinositol-4,5-bisphosphate binding // inferred from sequence or structural similarity /// 0005547 // phosphatidylinositol-3,4,5-trisphosphate binding // inferred from sequence or structural similarity","chr2:192110125-192290102 (+) // 96.44 // q32.3"]
["11734935_a_at",0.0022702217,-0.16897249,-0.17247105,0.0713439,0.050746918,-0.0022702217,0.40312898,0.06823367,-1.1118776,-0.15299793,1.1118776,"down","ARID5A",10865.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement","chr2:97202463-97218370 (+) // 96.4 // q11.2"]
["11753333_x_at",0.011687279,0.052215576,0.020295143,-0.036780357,-0.011687279,-0.043520927,0.2575234,0.020014824,1.0415477,0.05872885,1.0415477,"up","RTN3",10313.0,"0006810 // transport // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0071786 // endoplasmic reticulum tubular network organization // inferred from mutant phenotype","0000139 // Golgi membrane // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr11:63448971-63526015 (+) // 100.0 // q13.1 /// chr4:146296557-146297750 (+) // 96.88 // q31.21"]
["11750568_a_at",-0.03452301,0.1694634,0.017680645,-0.017680645,0.057513,-0.073158264,0.7628801,0.43755758,1.0438992,0.06198238,1.0438992,"up","SALL1",6299.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001657 // ureteric bud development // inferred from sequence or structural similarity /// 0001657 // ureteric bud development // inferred from electronic annotation /// 0001658 // branching involved in ureteric bud morphogenesis // inferred from sequence or structural similarity /// 0001822 // kidney development // inferred from mutant phenotype /// 0001843 // neural tube closure // inferred from electronic annotation /// 0003281 // ventricular septum development // inferred from sequence or structural similarity /// 0003281 // ventricular septum development // inferred from electronic annotation /// 0003337 // mesenchymal to epithelial transition involved in metanephros morphogenesis // inferred from expression pattern /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007507 // heart development // inferred from mutant phenotype /// 0008406 // gonad development // inferred from expression pattern /// 0016575 // histone deacetylation // inferred from sequence or structural similarity /// 0021553 // olfactory nerve development // inferred from sequence or structural similarity /// 0021553 // olfactory nerve development // inferred from electronic annotation /// 0021772 // olfactory bulb development // inferred from electronic annotation /// 0021889 // olfactory bulb interneuron differentiation // inferred from sequence or structural similarity /// 0021915 // neural tube development // inferred from electronic annotation /// 0021983 // pituitary gland development // inferred from expression pattern /// 0030177 // positive regulation of Wnt receptor signaling pathway // inferred from direct assay /// 0030325 // adrenal gland development // inferred from expression pattern /// 0031129 // inductive cell-cell signaling // inferred from sequence or structural similarity /// 0031129 // inductive cell-cell signaling // inferred from electronic annotation /// 0035136 // forelimb morphogenesis // inferred from electronic annotation /// 0035137 // hindlimb morphogenesis // inferred from electronic annotation /// 0042473 // outer ear morphogenesis // inferred from mutant phenotype /// 0042733 // embryonic digit morphogenesis // inferred from mutant phenotype /// 0045666 // positive regulation of neuron differentiation // inferred from electronic annotation /// 0045879 // negative regulation of smoothened signaling pathway // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048566 // embryonic digestive tract development // inferred from mutant phenotype /// 0060173 // limb development // inferred from mutant phenotype /// 0061034 // olfactory bulb mitral cell layer development // inferred from mutant phenotype /// 0072073 // kidney epithelium development // inferred from sequence or structural similarity /// 0072092 // ureteric bud invasion // inferred from sequence or structural similarity /// 0072092 // ureteric bud invasion // inferred from electronic annotation /// 2000177 // regulation of neural precursor cell proliferation // inferred from electronic annotation","0000792 // heterochromatin // inferred from direct assay /// 0000792 // heterochromatin // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0010369 // chromocenter // inferred from direct assay /// 0016581 // NuRD complex // inferred from sequence or structural similarity /// 0016581 // NuRD complex // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0004407 // histone deacetylase activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0008013 // beta-catenin binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:51170584-51185181 (-) // 98.92 // q12.1"]
["11735343_at",0.023985386,0.08782148,-0.023985386,0.040337086,-0.023985386,-0.078137636,0.70729285,0.34967288,1.035171,0.04986915,1.035171,"up","SOX3",6658.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007417 // central nervous system development // traceable author statement /// 0007423 // sensory organ development // inferred from sequence or structural similarity /// 0007423 // sensory organ development // inferred from electronic annotation /// 0007530 // sex determination // inferred from mutant phenotype /// 0007530 // sex determination // inferred from electronic annotation /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0021854 // hypothalamus development // inferred from sequence or structural similarity /// 0021854 // hypothalamus development // inferred from electronic annotation /// 0021983 // pituitary gland development // inferred from sequence or structural similarity /// 0021983 // pituitary gland development // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation /// 0045665 // negative regulation of neuron differentiation // inferred from sequence or structural similarity /// 0048515 // spermatid differentiation // inferred from electronic annotation /// 0060009 // Sertoli cell development // inferred from electronic annotation /// 0060324 // face development // inferred from sequence or structural similarity /// 0060324 // face development // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0000979 // RNA polymerase II core promoter sequence-specific DNA binding // inferred from sequence or structural similarity /// 0000979 // RNA polymerase II core promoter sequence-specific DNA binding // inferred from electronic annotation /// 0001106 // RNA polymerase II transcription corepressor activity // inferred from sequence or structural similarity /// 0001106 // RNA polymerase II transcription corepressor activity // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation","chrX:139585151-139587281 (-) // 87.4 // q27.1"]
["11727453_a_at",0.015857697,0.03957081,0.024363518,-0.015857697,-0.043073654,-0.04194069,0.16464989,0.0059206393,1.0426257,0.060221277,1.0426257,"up","C17orf79",55352.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0043985 // histone H4-R3 methylation // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0042393 // histone binding // inferred from direct assay","chr17:30178883-30186356 (-) // 89.87 // q11.2"]
["11750768_a_at",-0.058946133,0.20339441,-0.07798052,-0.0034947395,0.16526365,0.0034947395,0.92317784,0.77199686,-1.0230892,-0.032931894,1.0230892,"down","OSBPL6",114880.0,"0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // inferred from electronic annotation","","0005543 // phospholipid binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation","chr2:179059226-179247502 (+) // 98.97 // q31.2"]
["11730575_at",-0.061992407,-0.023019075,-0.14708567,0.066013575,0.023019075,0.07680106,0.29791987,0.029819129,-1.0963007,-0.1326436,1.0963007,"down","ZNF470",388566.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:57078879-57094261 (+) // 67.41 // q13.43"]
["11716820_x_at",0.39475226,-0.04825616,0.078330755,-7.920265E-4,-0.29181266,7.920265E-4,0.6050232,0.21840164,1.180076,0.23887977,1.180076,"up","PRSS1",5644.0,"0006508 // proteolysis // inferred from electronic annotation /// 0006508 // proteolysis // inferred from direct assay /// 0007586 // digestion // inferred from electronic annotation /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0030307 // positive regulation of cell growth // traceable author statement /// 0030574 // collagen catabolic process // inferred from direct assay /// 0030574 // collagen catabolic process // inferred from mutant phenotype /// 0045087 // innate immune response // traceable author statement /// 0045785 // positive regulation of cell adhesion // traceable author statement","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005576 // extracellular region // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005615 // extracellular space // inferred from mutant phenotype /// 0031012 // extracellular matrix // traceable author statement","0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // traceable author statement /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from direct assay /// 0005509 // calcium ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:142457317-142460922 (+) // 96.33 // q34"]
["11720929_a_at",0.071053505,0.08406305,0.20597124,-0.07196236,-0.10777664,-0.07105398,0.1998938,0.01026684,1.151856,0.2039603,1.151856,"up","DLST",1743.0,"0006091 // generation of precursor metabolites and energy // traceable author statement /// 0006099 // tricarboxylic acid cycle // traceable author statement /// 0006099 // tricarboxylic acid cycle // inferred from electronic annotation /// 0006103 // 2-oxoglutarate metabolic process // inferred from electronic annotation /// 0006554 // lysine catabolic process // traceable author statement /// 0006734 // NADH metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0033512 // L-lysine catabolic process to acetyl-CoA via saccharopine // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement /// 0005792 // microsome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0045252 // oxoglutarate dehydrogenase complex // inferred from electronic annotation","0004149 // dihydrolipoyllysine-residue succinyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0031072 // heat shock protein binding // inferred from electronic annotation /// 0051087 // chaperone binding // inferred from electronic annotation","chr14:75348595-75370443 (+) // 98.64 // q24.3"]
["11762503_at",-0.059147835,0.08231473,-0.027073383,0.018578291,0.03946972,-0.01857853,0.92188096,0.7692953,-1.0100724,-0.014458635,1.0100724,"down","GPR126",57211.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007218 // neuropeptide signaling pathway // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement","chr6:142726824-142764664 (+) // 65.95 // q24.1"]
["11728191_x_at",0.19112873,0.12527227,0.17524958,-0.12527227,-0.14470863,-0.2314086,0.08927132,9.745126E-4,1.2578967,0.3310134,1.2578967,"up","CXCR4",7852.0,"0000187 // activation of MAPK activity // traceable author statement /// 0001569 // patterning of blood vessels // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from expression pattern /// 0001667 // ameboidal cell migration // inferred from electronic annotation /// 0001764 // neuron migration // inferred from electronic annotation /// 0002407 // dendritic cell chemotaxis // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006954 // inflammatory response // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from direct assay /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007204 // elevation of cytosolic calcium ion concentration // traceable author statement /// 0007281 // germ cell development // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0008045 // motor axon guidance // inferred from electronic annotation /// 0008354 // germ cell migration // inferred from electronic annotation /// 0009615 // response to virus // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0019059 // initiation of viral infection // traceable author statement /// 0019722 // calcium-mediated signaling // inferred from mutant phenotype /// 0030260 // entry into host cell // traceable author statement /// 0030334 // regulation of cell migration // inferred from electronic annotation /// 0042098 // T cell proliferation // inferred from electronic annotation /// 0043217 // myelin maintenance // inferred from sequence or structural similarity /// 0043217 // myelin maintenance // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0048699 // generation of neurons // inferred from electronic annotation /// 0048714 // positive regulation of oligodendrocyte differentiation // inferred from sequence or structural similarity /// 0048714 // positive regulation of oligodendrocyte differentiation // inferred from electronic annotation /// 0050920 // regulation of chemotaxis // inferred from mutant phenotype /// 0061351 // neural precursor cell proliferation // inferred from electronic annotation /// 0070098 // chemokine-mediated signaling pathway // inferred from electronic annotation","0005737 // cytoplasm // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from direct assay /// 0030426 // growth cone // inferred from electronic annotation /// 0031252 // cell leading edge // inferred from direct assay /// 0031410 // cytoplasmic vesicle // inferred from direct assay","0003779 // actin binding // inferred from direct assay /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004950 // chemokine receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0015026 // coreceptor activity // traceable author statement /// 0016494 // C-X-C chemokine receptor activity // non-traceable author statement /// 0016494 // C-X-C chemokine receptor activity // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0032027 // myosin light chain binding // inferred from direct assay /// 0043130 // ubiquitin binding // inferred from direct assay","chr2:136871919-136874273 (-) // 97.21 // q22.1"]
["11718698_at",0.067858696,-0.07151461,-0.17457628,-0.004462242,0.004462242,0.07225561,0.68843853,0.3240213,-1.0595825,-0.083495885,1.0595825,"down","C6orf89",221477.0,"0042060 // wound healing // inferred from direct assay /// 0045787 // positive regulation of cell cycle // inferred from direct assay /// 0050673 // epithelial cell proliferation // inferred from direct assay","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr6:36853685-36896740 (+) // 91.22 // p21.2"]
["11726188_at",-0.14741302,0.0054302216,-0.043573856,-0.0038805008,0.0038805008,0.10366917,0.54840577,0.16503191,-1.0691087,-0.096408576,1.0691087,"down","SHISA3",152573.0,"0007275 // multicellular organismal development // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr4:42399798-42404504 (+) // 98.45 // p13"]
["11751074_x_at",0.020511627,0.07277489,0.11550617,-0.029785156,-0.032637596,-0.020511627,0.27839342,0.024691647,1.0697268,0.09724242,1.0697268,"up","ARHGDIA",396.0,"0006916 // anti-apoptosis // traceable author statement /// 0006928 // cellular component movement // traceable author statement /// 0007162 // negative regulation of cell adhesion // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007266 // Rho protein signal transduction // inferred from electronic annotation /// 0007266 // Rho protein signal transduction // traceable author statement /// 0032880 // regulation of protein localization // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0050770 // regulation of axonogenesis // traceable author statement /// 0050771 // negative regulation of axonogenesis // traceable author statement /// 0050772 // positive regulation of axonogenesis // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0001772 // immunological synapse // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // traceable author statement","0005094 // Rho GDP-dissociation inhibitor activity // inferred from electronic annotation /// 0005094 // Rho GDP-dissociation inhibitor activity // traceable author statement /// 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr17:79825672-79829252 (-) // 97.3 // q25.3"]
["11729181_at",-0.0015006065,-0.11532879,0.0015006065,0.20909739,0.1318841,-0.03882456,0.55170923,0.16781923,-1.1012652,-0.13916191,1.1012652,"down","DHRSX",207063.0,"0008152 // metabolic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0000228 // nuclear chromosome // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0004803 // transposase activity // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation","chrX:2137546-2419015 (-) // 80.53 // p22.33 /// chrY:2087546-2369015 (-) // 80.53 // p11.32"]
["11721278_s_at",0.015099525,0.07363987,0.14031887,-0.015099525,-0.055262566,-0.031603813,0.34382248,0.043968823,1.0794836,0.11034136,1.0794836,"up","SUV39H1",6839.0,"0000183 // chromatin silencing at rDNA // inferred from direct assay /// 0006325 // chromatin organization // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006364 // rRNA processing // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0016571 // histone methylation // inferred from direct assay /// 0030154 // cell differentiation // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation /// 0034968 // histone lysine methylation // inferred from direct assay /// 0034968 // histone lysine methylation // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0051567 // histone H3-K9 methylation // inferred from direct assay /// 0051567 // histone H3-K9 methylation // inferred from electronic annotation","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000792 // heterochromatin // inferred from direct assay /// 0000792 // heterochromatin // inferred from electronic annotation /// 0000794 // condensed nuclear chromosome // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005677 // chromatin silencing complex // inferred from direct assay /// 0005677 // chromatin silencing complex // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0033553 // rDNA heterochromatin // inferred from direct assay","0003682 // chromatin binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008757 // S-adenosylmethionine-dependent methyltransferase activity // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation /// 0018024 // histone-lysine N-methyltransferase activity // inferred from direct assay /// 0018024 // histone-lysine N-methyltransferase activity // inferred from electronic annotation /// 0042054 // histone methyltransferase activity // inferred from direct assay /// 0046974 // histone methyltransferase activity (H3-K9 specific) // inferred from direct assay /// 0046974 // histone methyltransferase activity (H3-K9 specific) // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from physical interaction","chrX:48554923-48567407 (+) // 89.98 // p11.23"]
["11751556_a_at",-0.1258192,-0.04873371,0.04873371,0.15975189,-0.20444489,0.073758125,0.88795346,0.6914687,-1.0364339,-0.051628157,1.0364339,"down","NUDT13",25961.0,"","0005739 // mitochondrion // inferred from electronic annotation","0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr10:74870279-74890700 (+) // 99.91 // q22.1"]
["11715105_at",-0.06385684,-0.021668434,0.021668434,0.047623873,0.036114216,-0.06866145,0.84040195,0.585942,-1.0184048,-0.026311183,1.0184048,"down","C17orf78",284099.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr17:35732984-35749660 (+) // 98.15 // q12"]
["11740848_a_at",0.032679796,-0.06962204,-0.1788547,-0.032679558,0.08134556,0.056140184,0.5891152,0.20251393,-1.0768876,-0.106867686,1.0768876,"down","SLC30A10",55532.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // inferred from electronic annotation /// 0006829 // zinc ion transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008324 // cation transmembrane transporter activity // inferred from electronic annotation","chr1:220087605-220101993 (-) // 98.26 // q41"]
["11731270_a_at",0.15700698,-0.03165698,-0.03127837,0.03127861,0.2553699,-0.1219542,0.9545219,0.8612077,-1.0164511,-0.02354084,1.0164511,"down","MGAM",8972.0,"0005975 // carbohydrate metabolic process // traceable author statement /// 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0005983 // starch catabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0044245 // polysaccharide digestion // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation","0003824 // catalytic activity // traceable author statement /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004339 // glucan 1,4-alpha-glucosidase activity // inferred from electronic annotation /// 0004553 // hydrolase activity, hydrolyzing O-glycosyl compounds // inferred from electronic annotation /// 0004558 // alpha-glucosidase activity // traceable author statement /// 0004558 // alpha-glucosidase activity // inferred from electronic annotation /// 0016160 // amylase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity, acting on glycosyl bonds // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation /// 0032450 // maltose alpha-glucosidase activity // inferred from electronic annotation","chr7:141607612-141806547 (+) // 99.51 // q34"]
["11716332_a_at",-0.036956787,-0.13113594,-0.0047512054,0.028104782,0.0047512054,0.014687538,0.5030683,0.12915146,-1.0522391,-0.07346251,1.0522391,"down","RPL28",6158.0,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral infectious cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr19:55896712-55903460 (+) // 74.45 // q13.42"]
["11735095_at",-0.052805662,-0.0038981438,-0.22505617,0.18040252,0.024201393,0.0038979053,0.51013404,0.13426808,-1.1199393,-0.16342057,1.1199393,"down","LEP",3952.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001542 // ovulation from ovarian follicle // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001819 // positive regulation of cytokine production // inferred from electronic annotation /// 0001890 // placenta development // inferred from direct assay /// 0001932 // regulation of protein phosphorylation // inferred from electronic annotation /// 0002021 // response to dietary excess // inferred from electronic annotation /// 0006006 // glucose metabolic process // inferred from electronic annotation /// 0006111 // regulation of gluconeogenesis // inferred from electronic annotation /// 0006112 // energy reserve metabolic process // inferred from electronic annotation /// 0006112 // energy reserve metabolic process // traceable author statement /// 0006114 // glycerol biosynthetic process // inferred from electronic annotation /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007260 // tyrosine phosphorylation of STAT protein // inferred from electronic annotation /// 0007565 // female pregnancy // inferred from electronic annotation /// 0007584 // response to nutrient // inferred from electronic annotation /// 0007623 // circadian rhythm // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // inferred from electronic annotation /// 0008206 // bile acid metabolic process // inferred from electronic annotation /// 0008217 // regulation of blood pressure // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008343 // adult feeding behavior // inferred from sequence or structural similarity /// 0008343 // adult feeding behavior // inferred from electronic annotation /// 0009062 // fatty acid catabolic process // inferred from electronic annotation /// 0009892 // negative regulation of metabolic process // inferred from electronic annotation /// 0019222 // regulation of metabolic process // inferred from electronic annotation /// 0021954 // central nervous system neuron development // inferred from electronic annotation /// 0030073 // insulin secretion // inferred from electronic annotation /// 0030300 // regulation of intestinal cholesterol absorption // inferred from electronic annotation /// 0032099 // negative regulation of appetite // inferred from sequence or structural similarity /// 0032099 // negative regulation of appetite // inferred from electronic annotation /// 0032868 // response to insulin stimulus // inferred from electronic annotation /// 0033197 // response to vitamin E // inferred from electronic annotation /// 0033210 // leptin-mediated signaling pathway // inferred from electronic annotation /// 0033686 // positive regulation of luteinizing hormone secretion // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0035630 // bone mineralization involved in bone maturation // inferred from electronic annotation /// 0042307 // positive regulation of protein import into nucleus // inferred from electronic annotation /// 0042445 // hormone metabolic process // inferred from electronic annotation /// 0042517 // positive regulation of tyrosine phosphorylation of Stat3 protein // inferred from electronic annotation /// 0042755 // eating behavior // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043270 // positive regulation of ion transport // inferred from electronic annotation /// 0043410 // positive regulation of MAPK cascade // inferred from electronic annotation /// 0045639 // positive regulation of myeloid cell differentiation // inferred from electronic annotation /// 0045906 // negative regulation of vasoconstriction // inferred from electronic annotation /// 0046427 // positive regulation of JAK-STAT cascade // inferred from electronic annotation /// 0046628 // positive regulation of insulin receptor signaling pathway // inferred from electronic annotation /// 0046881 // positive regulation of follicle-stimulating hormone secretion // inferred from electronic annotation /// 0048639 // positive regulation of developmental growth // inferred from direct assay /// 0050796 // regulation of insulin secretion // inferred from electronic annotation /// 0050810 // regulation of steroid biosynthetic process // inferred from electronic annotation /// 0050867 // positive regulation of cell activation // inferred from electronic annotation /// 0050901 // leukocyte tethering or rolling // inferred from electronic annotation /// 0051956 // negative regulation of amino acid transport // inferred from electronic annotation /// 0060587 // regulation of lipoprotein lipid oxidation // inferred from electronic annotation /// 0060612 // adipose tissue development // inferred from electronic annotation /// 0061037 // negative regulation of cartilage development // inferred from electronic annotation /// 0070093 // negative regulation of glucagon secretion // inferred from electronic annotation /// 0071298 // cellular response to L-ascorbic acid // inferred from electronic annotation /// 0071300 // cellular response to retinoic acid // inferred from electronic annotation /// 2000366 // positive regulation of STAT protein import into nucleus // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from sequence or structural similarity /// 0005615 // extracellular space // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0005622 // intracellular // inferred from electronic annotation","0005179 // hormone activity // inferred from electronic annotation /// 0008083 // growth factor activity // inferred from electronic annotation /// 0051428 // peptide hormone receptor binding // inferred from electronic annotation","chr7:127892041-127897681 (+) // 82.25 // q32.1"]
["11721154_a_at",-0.13458395,-0.0730319,0.0730319,0.09131956,0.16494036,-0.093257904,0.72052205,0.37056407,-1.0711758,-0.09919529,1.0711758,"down","STK3",6788.0,"0001841 // neural tube formation // inferred from electronic annotation /// 0003157 // endocardium development // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007243 // intracellular protein kinase cascade // inferred from direct assay /// 0007417 // central nervous system development // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0035329 // hippo signaling cascade // inferred from direct assay /// 0035329 // hippo signaling cascade // traceable author statement /// 0035329 // hippo signaling cascade // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from sequence or structural similarity /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0046621 // negative regulation of organ growth // inferred from electronic annotation /// 0060215 // primitive hemopoiesis // inferred from electronic annotation /// 0060706 // cell differentiation involved in embryonic placenta development // inferred from electronic annotation /// 0071902 // positive regulation of protein serine/threonine kinase activity // inferred from direct assay /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from mutant phenotype /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // not recorded /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0043539 // protein serine/threonine kinase activator activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from sequence or structural similarity","chr8:99466860-99837950 (-) // 97.39 // q22.2"]
["11761389_at",-0.011864901,-0.019892454,-0.12860823,0.12431264,0.16941428,0.011864901,0.38764152,0.06104282,-1.113668,-0.15531917,1.113668,"down","CD3G",917.0,"0006461 // protein complex assembly // non-traceable author statement /// 0007163 // establishment or maintenance of cell polarity // inferred from mutant phenotype /// 0007166 // cell surface receptor signaling pathway // inferred from mutant phenotype /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0015031 // protein transport // inferred from mutant phenotype /// 0031295 // T cell costimulation // traceable author statement /// 0042110 // T cell activation // non-traceable author statement /// 0042981 // regulation of apoptotic process // inferred from mutant phenotype /// 0050776 // regulation of immune response // traceable author statement /// 0050852 // T cell receptor signaling pathway // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0042101 // T cell receptor complex // non-traceable author statement /// 0042105 // alpha-beta T cell receptor complex // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from mutant phenotype /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0030159 // receptor signaling complex scaffold activity // non-traceable author statement /// 0042608 // T cell receptor binding // non-traceable author statement /// 0046982 // protein heterodimerization activity // inferred from physical interaction","chr11:118215058-118220913 (+) // 84.62 // q23.3"]
["11733691_a_at",0.09999919,0.08199835,-0.14952683,0.0377481,-0.0377481,-0.040166378,0.92878723,0.78825164,1.0169244,0.024212403,1.0169244,"up","SIGLEC7",27036.0,"0007155 // cell adhesion // inferred from electronic annotation","0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // traceable author statement /// 0030246 // carbohydrate binding // inferred from electronic annotation /// 0030246 // carbohydrate binding // traceable author statement","chr19:51645557-51656783 (+) // 84.08 // q13.41"]
["11760793_x_at",0.01632166,-0.15122747,-0.07706022,-0.01632166,0.20231724,0.076600075,0.4888252,0.11838579,-1.1158842,-0.1581873,1.1158842,"down","TBC1D26",353149.0,"0032313 // regulation of Rab GTPase activity // inferred from electronic annotation /// 0032851 // positive regulation of Rab GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005097 // Rab GTPase activator activity // inferred from electronic annotation","chr17:15635596-15647766 (+) // 93.39 // p12"]
["11746697_a_at",-0.021940231,0.004211426,-0.004211426,0.057204247,-0.03320408,0.064427376,0.6850876,0.31882697,-1.0258282,-0.036789197,1.0258282,"down","SLC3A2",6520.0,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006816 // calcium ion transport // non-traceable author statement /// 0006865 // amino acid transport // traceable author statement /// 0006865 // amino acid transport // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0015804 // neutral amino acid transport // inferred from electronic annotation /// 0015827 // tryptophan transport // inferred from sequence or structural similarity /// 0016049 // cell growth // non-traceable author statement /// 0050900 // leukocyte migration // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0060356 // leucine import // inferred from sequence or structural similarity /// 0060356 // leucine import // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0005432 // calcium:sodium antiporter activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0015175 // neutral amino acid transmembrane transporter activity // inferred from sequence or structural similarity /// 0015175 // neutral amino acid transmembrane transporter activity // inferred from electronic annotation /// 0043169 // cation binding // inferred from electronic annotation","chr11:62648371-62656299 (+) // 95.22 // q12.3"]
["11720207_a_at",-0.0064144135,0.008687019,-0.13695955,0.046788216,-0.13003206,0.0064144135,0.93257594,0.79854804,-1.0134577,-0.019285811,1.0134577,"down","IL2RG",3561.0,"0006955 // immune response // traceable author statement /// 0007165 // signal transduction // non-traceable author statement /// 0019221 // cytokine-mediated signaling pathway // inferred from electronic annotation /// 0035771 // interleukin-4-mediated signaling pathway // traceable author statement /// 0038110 // interleukin-2-mediated signaling pathway // traceable author statement /// 0038111 // interleukin-7-mediated signaling pathway // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0009897 // external side of plasma membrane // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004896 // cytokine receptor activity // inferred from electronic annotation /// 0004911 // interleukin-2 receptor activity // traceable author statement /// 0004913 // interleukin-4 receptor activity // traceable author statement /// 0004917 // interleukin-7 receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0019976 // interleukin-2 binding // inferred from sequence or structural similarity","chrX:70327253-70331425 (-) // 90.97 // q13.1"]
["11742554_at",-0.10413885,0.12150836,-0.063245535,0.0013275146,-0.0013275146,0.019009352,0.9231309,0.77183604,-1.0151047,-0.02162847,1.0151047,"down","OR13C4",138804.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr9:107288533-107289490 (-) // 100.0 // q31.1"]
["11728953_a_at",-0.124813795,-0.019343853,-0.13727736,0.019343615,0.37150836,0.23374486,0.3609485,0.050391756,-1.2328614,-0.30201063,1.2328614,"down","GPR98",84059.0,"0007154 // cell communication // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // non-traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007218 // neuropeptide signaling pathway // inferred from electronic annotation /// 0007399 // nervous system development // non-traceable author statement /// 0007601 // visual perception // inferred from electronic annotation /// 0007605 // sensory perception of sound // inferred from mutant phenotype /// 0007605 // sensory perception of sound // inferred from electronic annotation /// 0016337 // cell-cell adhesion // non-traceable author statement /// 0045494 // photoreceptor cell maintenance // inferred from mutant phenotype /// 0048496 // maintenance of organ identity // inferred from mutant phenotype /// 0048839 // inner ear development // inferred from electronic annotation /// 0050877 // neurological system process // inferred from mutant phenotype /// 0050877 // neurological system process // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050910 // detection of mechanical stimulus involved in sensory perception of sound // inferred from electronic annotation /// 0050953 // sensory perception of light stimulus // inferred from mutant phenotype /// 0060122 // inner ear receptor stereocilium organization // inferred from electronic annotation","0002142 // stereocilia ankle link complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // non-traceable author statement /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0017022 // myosin binding // inferred from electronic annotation","chr5:89854616-90460254 (+) // 99.59 // q14.3"]
["11739631_at",-0.014846325,0.10875893,0.1109817,-0.16613507,0.014052868,-0.014053106,0.5323829,0.15076369,1.0895078,0.123676546,1.0895078,"up","RPGR",6103.0,"0006886 // intracellular protein transport // traceable author statement /// 0007601 // visual perception // inferred from mutant phenotype /// 0007601 // visual perception // inferred from electronic annotation /// 0030030 // cell projection organization // inferred from electronic annotation /// 0042384 // cilium assembly // inferred from mutant phenotype /// 0042462 // eye photoreceptor cell development // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation","0001750 // photoreceptor outer segment // inferred from direct assay /// 0005622 // intracellular // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from sequence or structural similarity /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0005932 // microtubule basal body // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chrX:38143661-38186787 (-) // 70.77 // p11.4"]
["11754755_a_at",0.018474102,-0.043418884,0.05035448,0.032495975,-0.018474102,-0.027490139,0.89936036,0.7167014,1.0090232,0.012959331,1.0090232,"up","POLR3B",55703.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006383 // transcription from RNA polymerase III promoter // traceable author statement /// 0006385 // transcription elongation from RNA polymerase III promoter // traceable author statement /// 0006386 // termination of RNA polymerase III transcription // traceable author statement /// 0009615 // response to virus // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0032728 // positive regulation of interferon-beta production // inferred from mutant phenotype /// 0045087 // innate immune response // inferred from electronic annotation /// 0045089 // positive regulation of innate immune response // inferred from mutant phenotype","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0003677 // DNA binding // inferred from electronic annotation /// 0003899 // DNA-directed RNA polymerase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016779 // nucleotidyltransferase activity // inferred from electronic annotation /// 0032549 // ribonucleoside binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:106830833-106903974 (+) // 96.97 // q23.3"]
["11729284_x_at",0.0793252,0.12312508,-0.027058125,-0.068526745,-0.027205467,0.027058125,0.5822168,0.19604069,1.0580115,0.08135535,1.0580115,"up","MEF2B /// MEF2BNB /// MEF2BNB-MEF2B","100271849 /// 4207 /// 729991","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007507 // heart development // inferred from expression pattern /// 0007517 // muscle organ development // traceable author statement","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0042826 // histone deacetylase binding // inferred from physical interaction /// 0046983 // protein dimerization activity // inferred from electronic annotation","chr19:19256375-19281098 (-) // 95.2 // p13.11"]
["11754786_s_at",-0.46353817,-0.0090818405,-0.52048874,0.0090818405,0.11249733,0.08028889,0.4119154,0.07285136,-1.3179773,-0.39832553,1.3179773,"down","MXRA8",54587.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr1:1288071-1297183 (-) // 93.67 // p36.33"]
["11733755_at",-0.26421452,0.07164478,0.008036613,0.04049158,-0.19419146,-0.008036613,0.9863795,0.9545869,-1.0052811,-0.0075989556,1.0052811,"down","PKD2L1",9033.0,"0001581 // detection of chemical stimulus involved in sensory perception of sour taste // inferred from sequence or structural similarity /// 0001581 // detection of chemical stimulus involved in sensory perception of sour taste // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // inferred from sequence or structural similarity /// 0006812 // cation transport // inferred from electronic annotation /// 0035725 // sodium ion transmembrane transport // inferred from direct assay /// 0051925 // regulation of calcium ion transport via voltage-gated calcium channel activity // inferred from direct assay /// 0071468 // cellular response to acidity // inferred from sequence or structural similarity /// 0071468 // cellular response to acidity // inferred from electronic annotation /// 0071805 // potassium ion transmembrane transport // inferred from direct assay","0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from mutant phenotype /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from sequence or structural similarity /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0005216 // ion channel activity // inferred from electronic annotation /// 0005227 // calcium activated cation channel activity // inferred from direct assay /// 0005261 // cation channel activity // inferred from direct assay /// 0005261 // cation channel activity // inferred from electronic annotation /// 0005272 // sodium channel activity // inferred from direct assay /// 0005509 // calcium ion binding // inferred from sequence or structural similarity /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008092 // cytoskeletal protein binding // inferred from physical interaction /// 0008324 // cation transmembrane transporter activity // inferred from sequence or structural similarity /// 0008324 // cation transmembrane transporter activity // inferred from electronic annotation /// 0015269 // calcium-activated potassium channel activity // inferred from direct assay /// 0033040 // sour taste receptor activity // inferred from sequence or structural similarity /// 0033040 // sour taste receptor activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from sequence or structural similarity /// 0042802 // identical protein binding // inferred from electronic annotation /// 0051371 // muscle alpha-actinin binding // inferred from physical interaction /// 0051393 // alpha-actinin binding // inferred from physical interaction","chr10:102047905-102090243 (-) // 94.79 // q24.31"]
["11717222_a_at",-0.053738594,0.1359067,0.09561062,-0.0060510635,-0.13035107,0.0060510635,0.6139272,0.22847733,1.0737885,0.10270989,1.0737885,"up","EXTL3",2137.0,"0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0015012 // heparan sulfate proteoglycan biosynthetic process // inferred from electronic annotation /// 0030307 // positive regulation of cell growth // inferred from electronic annotation /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031227 // intrinsic to endoplasmic reticulum membrane // inferred from electronic annotation","0001888 // glucuronyl-galactosyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0016758 // transferase activity, transferring hexosyl groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:28457985-28611204 (+) // 96.83 // p21.1"]
["11757517_x_at",0.024939537,0.07559776,0.027733803,-0.04089737,-0.04744816,-0.024939537,0.20083624,0.010520894,1.0573982,0.080518775,1.0573982,"up","POR",5447.0,"0003420 // regulation of growth plate cartilage chondrocyte proliferation // inferred from electronic annotation /// 0007584 // response to nutrient // inferred from electronic annotation /// 0009437 // carnitine metabolic process // inferred from electronic annotation /// 0009812 // flavonoid metabolic process // inferred from electronic annotation /// 0018393 // internal peptidyl-lysine acetylation // inferred from electronic annotation /// 0019395 // fatty acid oxidation // inferred from electronic annotation /// 0032332 // positive regulation of chondrocyte differentiation // inferred from electronic annotation /// 0032770 // positive regulation of monooxygenase activity // inferred from direct assay /// 0042493 // response to drug // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from electronic annotation /// 0043602 // nitrate catabolic process // inferred from electronic annotation /// 0045542 // positive regulation of cholesterol biosynthetic process // inferred from electronic annotation /// 0045880 // positive regulation of smoothened signaling pathway // inferred from electronic annotation /// 0046210 // nitric oxide catabolic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from direct assay /// 0055114 // oxidation-reduction process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0060192 // negative regulation of lipase activity // inferred from electronic annotation /// 0070988 // demethylation // inferred from electronic annotation /// 0071371 // cellular response to gonadotropin stimulus // inferred from electronic annotation /// 0071372 // cellular response to follicle-stimulating hormone stimulus // inferred from electronic annotation /// 0071375 // cellular response to peptide hormone stimulus // inferred from electronic annotation /// 0090031 // positive regulation of steroid hormone biosynthetic process // inferred from electronic annotation /// 0090181 // regulation of cholesterol metabolic process // inferred from electronic annotation /// 0090346 // cellular organofluorine metabolic process // inferred from direct assay","0005624 // membrane fraction // inferred from electronic annotation /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from direct assay /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0003958 // NADPH-hemoprotein reductase activity // inferred from direct assay /// 0003958 // NADPH-hemoprotein reductase activity // traceable author statement /// 0003958 // NADPH-hemoprotein reductase activity // inferred from electronic annotation /// 0004128 // cytochrome-b5 reductase activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from electronic annotation /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0010181 // FMN binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from electronic annotation /// 0047726 // iron-cytochrome-c reductase activity // inferred from electronic annotation /// 0050660 // flavin adenine dinucleotide binding // inferred from electronic annotation /// 0050661 // NADP binding // inferred from electronic annotation","chr7:75615812-75616172 (+) // 89.33 // q11.23"]
["11747400_a_at",0.024383545,0.05209303,-0.1218667,0.06840801,-0.037416458,-0.024383545,0.9323277,0.7981532,-1.0120866,-0.017332783,1.0120866,"down","COPS7A",50813.0,"0010388 // cullin deneddylation // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0008180 // signalosome // inferred from direct assay /// 0008180 // signalosome // inferred from electronic annotation","","chr12:6833425-6841000 (+) // 100.0 // p13.31"]
["11718961_a_at",0.06118965,0.016902924,0.06263161,-0.016902924,-0.14192295,-0.16020918,0.30630735,0.0320167,1.1120743,0.15325312,1.1120743,"up","NUFIP2",57532.0,"","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0042788 // polysomal ribosome // inferred from direct assay","0003723 // RNA binding // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr17:27582857-27621166 (-) // 94.03 // q11.2"]
["11763683_a_at",-0.015802383,-0.0038223267,0.027620316,0.0038223267,-0.07514858,0.05899334,0.95982635,0.87681437,1.0047079,0.006776172,1.0047079,"up","ARL6IP4",51329.0,"0008380 // RNA splicing // traceable author statement","0005634 // nucleus // traceable author statement","0005515 // protein binding // inferred from physical interaction","chr12:123465701-123466268 (+) // 69.12 // q24.31"]
["11729213_a_at",-0.07542658,0.073112965,-0.06646204,0.029839993,-0.013694763,0.013694763,0.8216975,0.5448087,-1.0230466,-0.03287188,1.0230466,"down","PCBP2",5094.0,"0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0009615 // response to virus // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016071 // mRNA metabolic process // non-traceable author statement /// 0032480 // negative regulation of type I interferon production // traceable author statement /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from mutant phenotype /// 0045087 // innate immune response // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation /// 0050687 // negative regulation of defense response to virus // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction","chr12:53845885-53874945 (+) // 91.59 // q13.13"]
["11741847_a_at",0.09836817,0.15061855,-0.07060504,-0.102345705,0.022164822,-0.022164822,0.6598177,0.28596777,1.0670116,0.09357585,1.0670116,"up","C2orf83",56918.0,"0006810 // transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation","0005542 // folic acid binding // inferred from electronic annotation /// 0008518 // reduced folate carrier activity // inferred from electronic annotation","chr2:228474805-228497888 (-) // 78.57 // q36.3"]
["11756596_a_at",0.02774334,-0.03279209,0.03660965,-0.16235638,0.047192574,-0.02774334,0.75389475,0.42195213,1.0411342,0.05815609,1.0411342,"up","PDPR",55066.0,"0006090 // pyruvate metabolic process // traceable author statement /// 0006546 // glycine catabolic process // inferred from electronic annotation /// 0010510 // regulation of acetyl-CoA biosynthetic process from pyruvate // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement /// 0005759 // mitochondrial matrix // inferred from electronic annotation","0004047 // aminomethyltransferase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation","chr16:70154033-70192230 (+) // 94.27 // q22.1"]
["11715930_at",-0.0047798157,-0.019849777,-0.036088943,0.011061668,0.0047798157,0.039121628,0.36016524,0.050107412,-1.0270885,-0.03856053,1.0270885,"down","SDHAF2",54949.0,"0006121 // mitochondrial electron transport, succinate to ubiquinone // inferred from mutant phenotype /// 0018293 // protein-FAD linkage // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr11:61197521-61214985 (+) // 89.99 // q12.2"]
["11735126_at",0.020275593,-0.020275593,0.21226597,-0.15471745,-0.06607056,0.10667515,0.7130669,0.35883924,1.0783256,0.1087929,1.0783256,"up","N4BP3",23138.0,"","0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","","chr5:177540443-177553402 (+) // 89.16 // q35.3"]
["11762111_x_at",-0.0073394775,-0.031199455,0.0073394775,0.08680534,-0.07734394,0.044909954,0.84908074,0.60240984,-1.0199678,-0.0285236,1.0199678,"down","EGFL8 /// PPT2 /// PPT2-EGFL8","100532746 /// 80864 /// 9374","0001701 // in utero embryonic development // inferred from sequence or structural similarity /// 0006464 // cellular protein modification process // non-traceable author statement /// 0006464 // cellular protein modification process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005764 // lysosome // non-traceable author statement /// 0005764 // lysosome // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0016021 // integral to membrane // non-traceable author statement","0005509 // calcium ion binding // inferred from electronic annotation /// 0008474 // palmitoyl-(protein) hydrolase activity // non-traceable author statement /// 0008474 // palmitoyl-(protein) hydrolase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016790 // thiolester hydrolase activity // non-traceable author statement","chr6:32121921-32134334 (+) // 99.61 // p21.32"]
["11745398_a_at",-0.027584553,0.027584553,0.036550045,0.0652976,-0.17215729,-0.119644165,0.6751417,0.30588108,1.0626633,0.08768458,1.0626633,"up","NF1",4763.0,"0000165 // MAPK cascade // inferred from sequence or structural similarity /// 0000165 // MAPK cascade // inferred from electronic annotation /// 0001649 // osteoblast differentiation // inferred from sequence or structural similarity /// 0001649 // osteoblast differentiation // inferred from electronic annotation /// 0001656 // metanephros development // inferred from sequence or structural similarity /// 0001656 // metanephros development // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from sequence or structural similarity /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001889 // liver development // inferred from sequence or structural similarity /// 0001889 // liver development // inferred from electronic annotation /// 0001937 // negative regulation of endothelial cell proliferation // inferred from mutant phenotype /// 0001937 // negative regulation of endothelial cell proliferation // inferred from electronic annotation /// 0001938 // positive regulation of endothelial cell proliferation // inferred from electronic annotation /// 0001952 // regulation of cell-matrix adhesion // inferred from sequence or structural similarity /// 0001952 // regulation of cell-matrix adhesion // inferred from electronic annotation /// 0006469 // negative regulation of protein kinase activity // inferred from sequence or structural similarity /// 0006469 // negative regulation of protein kinase activity // inferred from electronic annotation /// 0007154 // cell communication // inferred from sequence or structural similarity /// 0007154 // cell communication // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007265 // Ras protein signal transduction // inferred from sequence or structural similarity /// 0007265 // Ras protein signal transduction // inferred from electronic annotation /// 0007406 // negative regulation of neuroblast proliferation // inferred from sequence or structural similarity /// 0007406 // negative regulation of neuroblast proliferation // inferred from electronic annotation /// 0007420 // brain development // inferred from sequence or structural similarity /// 0007420 // brain development // inferred from electronic annotation /// 0007422 // peripheral nervous system development // inferred from sequence or structural similarity /// 0007422 // peripheral nervous system development // inferred from electronic annotation /// 0007507 // heart development // inferred from sequence or structural similarity /// 0007507 // heart development // inferred from electronic annotation /// 0007519 // skeletal muscle tissue development // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0008542 // visual learning // inferred from sequence or structural similarity /// 0008542 // visual learning // inferred from electronic annotation /// 0014044 // Schwann cell development // inferred from sequence or structural similarity /// 0014044 // Schwann cell development // inferred from electronic annotation /// 0014065 // phosphatidylinositol 3-kinase cascade // inferred from sequence or structural similarity /// 0014065 // phosphatidylinositol 3-kinase cascade // inferred from electronic annotation /// 0016525 // negative regulation of angiogenesis // inferred from electronic annotation /// 0021510 // spinal cord development // inferred from sequence or structural similarity /// 0021510 // spinal cord development // inferred from electronic annotation /// 0021897 // forebrain astrocyte development // inferred from sequence or structural similarity /// 0021897 // forebrain astrocyte development // inferred from electronic annotation /// 0021915 // neural tube development // inferred from electronic annotation /// 0021987 // cerebral cortex development // inferred from sequence or structural similarity /// 0021987 // cerebral cortex development // inferred from electronic annotation /// 0022011 // myelination in peripheral nervous system // inferred from sequence or structural similarity /// 0022011 // myelination in peripheral nervous system // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from sequence or structural similarity /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030198 // extracellular matrix organization // inferred from sequence or structural similarity /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0030199 // collagen fibril organization // inferred from sequence or structural similarity /// 0030199 // collagen fibril organization // inferred from electronic annotation /// 0030325 // adrenal gland development // inferred from sequence or structural similarity /// 0030325 // adrenal gland development // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // inferred from mutant phenotype /// 0030336 // negative regulation of cell migration // inferred from electronic annotation /// 0032228 // regulation of synaptic transmission, GABAergic // inferred from electronic annotation /// 0032318 // regulation of Ras GTPase activity // inferred from mutant phenotype /// 0032320 // positive regulation of Ras GTPase activity // inferred from direct assay /// 0032320 // positive regulation of Ras GTPase activity // inferred from mutant phenotype /// 0032320 // positive regulation of Ras GTPase activity // inferred from sequence or structural similarity /// 0032320 // positive regulation of Ras GTPase activity // inferred from electronic annotation /// 0035021 // negative regulation of Rac protein signal transduction // inferred from electronic annotation /// 0042060 // wound healing // inferred from sequence or structural similarity /// 0042060 // wound healing // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042992 // negative regulation of transcription factor import into nucleus // inferred from sequence or structural similarity /// 0042992 // negative regulation of transcription factor import into nucleus // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from sequence or structural similarity /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043407 // negative regulation of MAP kinase activity // inferred from sequence or structural similarity /// 0043407 // negative regulation of MAP kinase activity // inferred from electronic annotation /// 0043409 // negative regulation of MAPK cascade // inferred from mutant phenotype /// 0043409 // negative regulation of MAPK cascade // inferred from sequence or structural similarity /// 0043409 // negative regulation of MAPK cascade // inferred from electronic annotation /// 0043473 // pigmentation // inferred from sequence or structural similarity /// 0043473 // pigmentation // inferred from electronic annotation /// 0043525 // positive regulation of neuron apoptotic process // inferred from sequence or structural similarity /// 0043525 // positive regulation of neuron apoptotic process // inferred from electronic annotation /// 0043535 // regulation of blood vessel endothelial cell migration // inferred from mutant phenotype /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0045124 // regulation of bone resorption // inferred from sequence or structural similarity /// 0045124 // regulation of bone resorption // inferred from electronic annotation /// 0045685 // regulation of glial cell differentiation // inferred from sequence or structural similarity /// 0045685 // regulation of glial cell differentiation // inferred from electronic annotation /// 0045762 // positive regulation of adenylate cyclase activity // inferred from sequence or structural similarity /// 0045762 // positive regulation of adenylate cyclase activity // inferred from electronic annotation /// 0045765 // regulation of angiogenesis // inferred from mutant phenotype /// 0045765 // regulation of angiogenesis // inferred from electronic annotation /// 0046580 // negative regulation of Ras protein signal transduction // not recorded /// 0046580 // negative regulation of Ras protein signal transduction // inferred from electronic annotation /// 0046929 // negative regulation of neurotransmitter secretion // inferred from electronic annotation /// 0048147 // negative regulation of fibroblast proliferation // inferred from electronic annotation /// 0048169 // regulation of long-term neuronal synaptic plasticity // inferred from electronic annotation /// 0048485 // sympathetic nervous system development // inferred from sequence or structural similarity /// 0048485 // sympathetic nervous system development // inferred from electronic annotation /// 0048593 // camera-type eye morphogenesis // inferred from sequence or structural similarity /// 0048593 // camera-type eye morphogenesis // inferred from electronic annotation /// 0048712 // negative regulation of astrocyte differentiation // inferred from electronic annotation /// 0048715 // negative regulation of oligodendrocyte differentiation // inferred from sequence or structural similarity /// 0048715 // negative regulation of oligodendrocyte differentiation // inferred from electronic annotation /// 0048745 // smooth muscle tissue development // inferred from sequence or structural similarity /// 0048745 // smooth muscle tissue development // inferred from electronic annotation /// 0048844 // artery morphogenesis // inferred from sequence or structural similarity /// 0048844 // artery morphogenesis // inferred from electronic annotation /// 0048853 // forebrain morphogenesis // inferred from sequence or structural similarity /// 0048853 // forebrain morphogenesis // inferred from electronic annotation /// 0050890 // cognition // inferred from mutant phenotype /// 0051056 // regulation of small GTPase mediated signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005737 // cytoplasm // not recorded /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0030424 // axon // inferred from direct assay /// 0030425 // dendrite // inferred from direct assay /// 0031235 // intrinsic to internal side of plasma membrane // not recorded","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005099 // Ras GTPase activator activity // inferred from direct assay /// 0005099 // Ras GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr17:29421944-29546377 (+) // 90.31 // q11.2"]
["11759489_s_at",-0.018932343,-0.09777975,0.018932343,0.1507783,-0.06397581,0.064907074,0.6764044,0.3079595,-1.0593381,-0.083163105,1.0593381,"down","TXNL1",9352.0,"0006662 // glycerol ether metabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0022900 // electron transport chain // inferred from electronic annotation /// 0045454 // cell redox homeostasis // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0009055 // electron carrier activity // inferred from electronic annotation /// 0015035 // protein disulfide oxidoreductase activity // inferred from electronic annotation /// 0015036 // disulfide oxidoreductase activity // inferred from direct assay","chr18:54275509-54305933 (-) // 72.91 // q21.31"]
["11733453_at",0.06514406,-0.18900108,-0.042443752,0.021875858,-0.021875381,0.038508415,0.7517241,0.41881663,-1.0484586,-0.06826986,1.0484586,"down","IRX5",10265.0,"0002027 // regulation of heart rate // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007601 // visual perception // inferred from electronic annotation /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0042551 // neuron maturation // inferred from electronic annotation /// 0048468 // cell development // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0060040 // retinal bipolar neuron differentiation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005499 // vitamin D binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr16:54965110-54968397 (+) // 93.75 // q12.2"]
["11755273_a_at",-0.16013622,-0.10328579,0.1108861,0.08917189,-0.0036540031,0.0036540031,0.7459627,0.4103879,-1.0574352,-0.08056919,1.0574352,"down","C16orf71",146562.0,"","","","chr16:4784502-4799395 (+) // 96.45 // p13.3"]
["11756013_a_at",0.011109114,-0.057400465,-0.11675763,0.02631092,0.09109092,-0.011109114,0.50615597,0.13171782,-1.0642083,-0.08978052,1.0642083,"down","BCL2L10",10017.0,"0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from direct assay /// 0006916 // anti-apoptosis // inferred from electronic annotation /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // traceable author statement /// 0007283 // spermatogenesis // traceable author statement /// 0007292 // female gamete generation // traceable author statement /// 0042981 // regulation of apoptotic process // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr15:52401946-52404965 (-) // 100.0 // q21.2"]
["11733859_s_at",0.06520796,-0.17896938,-0.09607601,-0.0140891075,0.0140891075,0.17209339,0.62270916,0.23936388,-1.0922555,-0.12731034,1.0922555,"down","CLASP2",23122.0,"0000087 // M phase of mitotic cell cycle // traceable author statement /// 0000236 // mitotic prometaphase // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0007020 // microtubule nucleation // inferred from mutant phenotype /// 0007026 // negative regulation of microtubule depolymerization // non-traceable author statement /// 0007026 // negative regulation of microtubule depolymerization // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0007163 // establishment or maintenance of cell polarity // traceable author statement /// 0007163 // establishment or maintenance of cell polarity // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0016477 // cell migration // inferred from electronic annotation /// 0031023 // microtubule organizing center organization // inferred from mutant phenotype /// 0031110 // regulation of microtubule polymerization or depolymerization // inferred from mutant phenotype /// 0032886 // regulation of microtubule-based process // inferred from mutant phenotype /// 0034453 // microtubule anchoring // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005828 // kinetochore microtubule // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0005874 // microtubule // inferred from electronic annotation /// 0005881 // cytoplasmic microtubule // inferred from direct assay /// 0005881 // cytoplasmic microtubule // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005938 // cell cortex // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from direct assay /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // inferred from electronic annotation /// 0008107 // galactoside 2-alpha-L-fucosyltransferase activity // non-traceable author statement /// 0051010 // microtubule plus-end binding // inferred from direct assay","chr3:33537680-33760236 (-) // 97.85 // p22.3"]
["11725412_s_at",-0.057213783,-0.0012140274,-0.0027990341,0.03890133,0.0012140274,0.13681698,0.5298155,0.14834636,-1.0565686,-0.07938647,1.0565686,"down","TRIM14",9830.0,"","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:100846468-100881695 (-) // 79.6 // q22.33"]
["11738413_a_at",0.11319065,-0.049481392,-0.1952281,0.06332779,0.049481392,-0.17361832,0.9505735,0.8509264,-1.0164716,-0.023569942,1.0164716,"down","PUS10",150962.0,"0001522 // pseudouridine synthesis // inferred from electronic annotation /// 0008033 // tRNA processing // inferred from electronic annotation /// 0009451 // RNA modification // inferred from electronic annotation","","0003723 // RNA binding // inferred from electronic annotation /// 0009982 // pseudouridine synthase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation","chr2:61167548-61245365 (-) // 94.35 // p16.1"]
["11746945_a_at",-0.004755497,0.021214962,-0.048906326,0.020812511,-0.05105257,0.004755497,0.9826265,0.9418337,-1.0016099,-0.002320758,1.0016099,"down","UBL4A",8266.0,"0006464 // cellular protein modification process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0071816 // tail-anchored membrane protein insertion into ER membrane // inferred from mutant phenotype","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0071818 // BAT3 complex // inferred from direct assay","0019787 // small conjugating protein ligase activity // traceable author statement","chrX:153713536-153714923 (-) // 99.53 // q28"]
["11734004_x_at",-0.039878845,-0.048399925,0.09665489,-0.01210022,0.01210022,0.08107567,0.88383573,0.68044347,-1.016939,-0.024233205,1.016939,"down","TMEM192 /// ZNF320","162967 /// 201931","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr4:165997230-166034071 (-) // 71.47 // q32.3"]
["11719521_at",-0.028586388,0.112553835,-0.10631919,0.028586388,-0.07377195,0.15860128,0.8705402,0.6515437,-1.0318662,-0.0452559,1.0318662,"down","SEMA5A",9037.0,"0001569 // patterning of blood vessels // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007411 // axon guidance // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0048754 // branching morphogenesis of a tube // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0008046 // axon guidance receptor activity // inferred from electronic annotation","chr5:9035141-9546233 (-) // 95.93 // p15.31"]
["11747003_x_at",0.18066096,-0.07868981,-0.08384323,0.073390484,0.011173725,-0.011173725,0.9504123,0.8493205,-1.0128503,-0.018420937,1.0128503,"down","LRRC31",79782.0,"","","","chr3:169556966-169587723 (-) // 99.04 // q26.2"]
["11755972_a_at",-0.08586359,-0.053195953,-0.02982521,0.02982521,0.09425831,0.053320885,0.19485913,0.009724218,-1.0832976,-0.11542964,1.0832976,"down","MGEA5",10724.0,"0006044 // N-acetylglucosamine metabolic process // inferred from electronic annotation /// 0006516 // glycoprotein catabolic process // traceable author statement /// 0006612 // protein targeting to membrane // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0010524 // positive regulation of calcium ion transport into cytosol // inferred from electronic annotation /// 0010616 // negative regulation of cardiac muscle adaptation // inferred from electronic annotation /// 0016573 // histone acetylation // inferred from electronic annotation /// 0031343 // positive regulation of cell killing // inferred from electronic annotation /// 0032024 // positive regulation of insulin secretion // inferred from electronic annotation /// 0043243 // positive regulation of protein complex disassembly // inferred from electronic annotation /// 0045862 // positive regulation of proteolysis // inferred from electronic annotation /// 0046060 // dATP metabolic process // inferred from electronic annotation /// 0046326 // positive regulation of glucose import // inferred from electronic annotation /// 0048545 // response to steroid hormone stimulus // inferred from electronic annotation /// 0051054 // positive regulation of DNA metabolic process // inferred from electronic annotation /// 0051901 // positive regulation of mitochondrial depolarization // inferred from electronic annotation /// 0051928 // positive regulation of calcium ion transport // inferred from electronic annotation /// 0060051 // negative regulation of protein glycosylation // inferred from electronic annotation /// 0060124 // positive regulation of growth hormone secretion // inferred from electronic annotation /// 0070265 // necrotic cell death // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004402 // histone acetyltransferase activity // inferred from electronic annotation /// 0004415 // hyalurononglucosaminidase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity, acting on glycosyl bonds // inferred from electronic annotation","chr10:103558999-103578191 (-) // 95.59 // q24.32"]
["11722015_at",0.19927835,0.2532444,0.22595692,-0.21169138,-0.31694126,-0.19927835,0.06690752,3.1654647E-4,1.3839549,0.4687969,1.3839549,"up","OLR1",4973.0,"0006508 // proteolysis // traceable author statement /// 0006954 // inflammatory response // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007159 // leukocyte cell-cell adhesion // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008015 // blood circulation // traceable author statement /// 0008219 // cell death // inferred from electronic annotation /// 0042157 // lipoprotein metabolic process // inferred from electronic annotation /// 0042542 // response to hydrogen peroxide // inferred from electronic annotation /// 0050900 // leukocyte migration // traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005624 // membrane fraction // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005041 // low-density lipoprotein receptor activity // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr12:10310899-10324802 (-) // 78.55 // p13.2"]
["11727071_at",0.048882723,0.14635324,0.24389625,-0.09041929,-0.048882723,-0.21481276,0.277645,0.024529664,1.2011495,0.26441568,1.2011495,"up","ENPP6",133121.0,"0008152 // metabolic process // inferred from electronic annotation /// 0016042 // lipid catabolic process // inferred from electronic annotation /// 0019695 // choline metabolic process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0008889 // glycerophosphodiester phosphodiesterase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr4:185009859-185139114 (-) // 91.17 // q35.1"]
["11728657_at",-0.008929968,0.008930206,-0.16167164,0.029928446,0.26967955,-0.21081495,0.85018045,0.60491544,-1.0595767,-0.08348809,1.0595767,"down","IGFBP5",3488.0,"0001558 // regulation of cell growth // inferred from electronic annotation /// 0001649 // osteoblast differentiation // inferred from electronic annotation /// 0006006 // glucose metabolic process // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0014912 // negative regulation of smooth muscle cell migration // inferred from direct assay /// 0017148 // negative regulation of translation // inferred from direct assay /// 0030336 // negative regulation of cell migration // inferred from direct assay /// 0031069 // hair follicle morphogenesis // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0042593 // glucose homeostasis // inferred from electronic annotation /// 0043569 // negative regulation of insulin-like growth factor receptor signaling pathway // inferred from direct assay /// 0043569 // negative regulation of insulin-like growth factor receptor signaling pathway // inferred from electronic annotation /// 0048630 // skeletal muscle tissue growth // inferred from electronic annotation /// 0048662 // negative regulation of smooth muscle cell proliferation // inferred from direct assay /// 0051146 // striated muscle cell differentiation // inferred from electronic annotation /// 0051897 // positive regulation of protein kinase B signaling cascade // inferred from electronic annotation /// 0060056 // mammary gland involution // inferred from electronic annotation /// 0071320 // cellular response to cAMP // inferred from direct assay /// 0071407 // cellular response to organic cyclic compound // inferred from direct assay","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0016942 // insulin-like growth factor binding protein complex // inferred by curator","0001968 // fibronectin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005520 // insulin-like growth factor binding // inferred from electronic annotation /// 0019838 // growth factor binding // inferred from electronic annotation /// 0031994 // insulin-like growth factor I binding // inferred from physical interaction","chr2:217536827-217560272 (-) // 94.34 // q35"]
["11735458_a_at",-0.009378433,-0.01132226,-0.041773796,0.009378433,0.018323183,0.04769063,0.33905825,0.04228787,-1.0323668,-0.045955583,1.0323668,"down","FBXO39",162517.0,"","","","chr17:6679541-6690965 (+) // 95.07 // p13.1"]
["11726666_a_at",-0.007563114,-0.06848478,-0.015084267,0.036770344,0.1323824,0.007563591,0.4621195,0.102359235,-1.0638412,-0.08928285,1.0638412,"down","MFSD8",256471.0,"0006810 // transport // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","","chr4:128838960-128887139 (-) // 92.95 // q28.2"]
["11726448_at",0.2569666,-0.21871853,0.11417627,-0.10449791,-0.12896204,0.10449791,0.8412555,0.5874397,1.0671741,0.09379552,1.0671741,"up","ZNF614",80110.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:52516762-52531926 (-) // 69.5 // q13.41"]
["11731855_at",-0.013341904,-0.048279285,0.092861176,0.06141281,0.013341904,-0.19855404,0.8466804,0.59826845,1.036471,0.051679764,1.036471,"up","C10orf107",219621.0,"","","","chr10:63422541-63526524 (+) // 94.67 // q21.2"]
["11734547_a_at",0.05344987,-0.10385966,0.13611865,-0.17291212,0.073382616,-0.05344987,0.783237,0.47101086,1.0566977,0.079562746,1.0566977,"up","TGM4",7047.0,"0018149 // peptide cross-linking // non-traceable author statement /// 0018149 // peptide cross-linking // inferred from electronic annotation /// 0018184 // protein polyamination // non-traceable author statement","","0003810 // protein-glutamine gamma-glutamyltransferase activity // non-traceable author statement /// 0003810 // protein-glutamine gamma-glutamyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:44916097-44956086 (+) // 96.08 // p21.31"]
["11740693_a_at",0.16633224,0.053728104,-0.04560852,-0.031229973,-0.13539696,0.031229973,0.636413,0.25691164,1.0742152,0.103283,1.0742152,"up","FAM83C",128876.0,"","","","chr20:33873286-33880225 (-) // 87.15 // q11.22"]
["11722354_at",-0.01717949,-0.03739357,0.12954617,0.012177467,0.026047707,-0.012177467,0.92498475,0.7768037,1.0113683,0.016308429,1.0113683,"up","SEC23A",10484.0,"0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006888 // ER to Golgi vesicle-mediated transport // traceable author statement /// 0006888 // ER to Golgi vesicle-mediated transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016044 // cellular membrane organization // traceable author statement /// 0016192 // vesicle-mediated transport // traceable author statement /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0048208 // COPII vesicle coating // traceable author statement","0000139 // Golgi membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0012507 // ER to Golgi transport vesicle membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030127 // COPII vesicle coat // inferred from electronic annotation /// 0030868 // smooth endoplasmic reticulum membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation","chr14:39501122-39572732 (-) // 98.24 // q21.1"]
["11717998_a_at",-0.049938202,-0.04932213,0.015693665,0.008616447,-0.008616447,0.02315712,0.5925453,0.20669597,-1.0249649,-0.035574544,1.0249649,"down","MPLKIP",136647.0,"0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0030496 // midbody // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr7:40172344-40174486 (-) // 86.28 // p14.1"]
["11746623_a_at",-0.009377003,0.022400856,-0.11686206,0.21002293,-0.031569242,0.009377241,0.6858226,0.3200705,-1.0697124,-0.09722297,1.0697124,"down","NR3C2",4306.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006883 // cellular sodium ion homeostasis // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007588 // excretion // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0031959 // mineralocorticoid receptor signaling pathway // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0043401 // steroid hormone mediated signaling pathway // traceable author statement /// 0043401 // steroid hormone mediated signaling pathway // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003707 // steroid hormone receptor activity // inferred from electronic annotation /// 0003707 // steroid hormone receptor activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0005496 // steroid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation /// 0017082 // mineralocorticoid receptor activity // inferred from electronic annotation /// 0042562 // hormone binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr4:149001343-149365850 (-) // 98.55 // q31.23"]
["11716197_a_at",0.1472969,0.13480997,0.3318901,-0.19756365,-0.21033955,-0.13480997,0.15157822,0.004734997,1.3063759,0.38557002,1.3063759,"up","ADIPOR2",79602.0,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0009755 // hormone-mediated signaling pathway // inferred from sequence or structural similarity /// 0019395 // fatty acid oxidation // inferred from sequence or structural similarity","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0042562 // hormone binding // inferred from sequence or structural similarity /// 0042802 // identical protein binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr12:1800188-1897845 (+) // 96.29 // p13.33"]
["11742047_s_at",0.09071803,0.0067722797,-0.0067722797,0.07730365,-0.015549421,-0.17240214,0.7660009,0.44333676,1.0476247,0.06712199,1.0476247,"up","ERMN",57471.0,"0001763 // morphogenesis of a branching structure // inferred from electronic annotation /// 0007015 // actin filament organization // inferred from electronic annotation /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0031344 // regulation of cell projection organization // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0030175 // filopodium // inferred from electronic annotation /// 0033269 // internode region of axon // inferred from electronic annotation /// 0033270 // paranode region of axon // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043209 // myelin sheath // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0051015 // actin filament binding // inferred from electronic annotation","chr2:158175125-158184218 (-) // 92.68 // q24.1"]
["11751503_a_at",-0.19272184,0.008542538,-0.1481204,0.09078455,0.028605938,-0.008542538,0.44793028,0.0940563,-1.1078142,-0.14771593,1.1078142,"down","FGF17",8822.0,"0007165 // signal transduction // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from electronic annotation","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement","0005105 // type 1 fibroblast growth factor receptor binding // inferred from direct assay /// 0005111 // type 2 fibroblast growth factor receptor binding // inferred from direct assay /// 0008083 // growth factor activity // inferred from electronic annotation /// 0008083 // growth factor activity // traceable author statement","chr8:21900425-21906317 (+) // 99.08 // p21.3"]
["11755159_a_at",-0.19255972,-0.07764912,-0.0074772835,0.086818695,0.0074772835,0.059791565,0.40758198,0.07048926,-1.1049067,-0.14392452,1.1049067,"down","COG3",83548.0,"0006486 // protein glycosylation // inferred from mutant phenotype /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006888 // ER to Golgi vesicle-mediated transport // inferred from direct assay /// 0006890 // retrograde vesicle-mediated transport, Golgi to ER // inferred from mutant phenotype /// 0006891 // intra-Golgi vesicle-mediated transport // inferred from direct assay /// 0015031 // protein transport // inferred from direct assay /// 0015031 // protein transport // inferred from electronic annotation /// 0033365 // protein localization to organelle // inferred from mutant phenotype /// 0050821 // protein stabilization // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005801 // cis-Golgi network // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0017119 // Golgi transport complex // inferred from direct assay /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008565 // protein transporter activity // inferred from direct assay","chr13:46039070-46110759 (+) // 96.57 // q14.13"]
["11721924_s_at",-0.16157484,0.06400609,0.1322577,0.015883684,-0.015883684,-0.2831459,0.77702296,0.46051922,1.076199,0.10594495,1.076199,"up","PRKCB",5579.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0010829 // negative regulation of glucose transport // inferred from sequence or structural similarity /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0030949 // positive regulation of vascular endothelial growth factor receptor signaling pathway // inferred from sequence or structural similarity /// 0035408 // histone H3-T6 phosphorylation // inferred from direct assay /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0042113 // B cell activation // inferred from sequence or structural similarity /// 0042953 // lipoprotein transport // traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from sequence or structural similarity /// 0045766 // positive regulation of angiogenesis // inferred from sequence or structural similarity /// 0046627 // negative regulation of insulin receptor signaling pathway // inferred from sequence or structural similarity /// 0050853 // B cell receptor signaling pathway // inferred from sequence or structural similarity /// 0050861 // positive regulation of B cell receptor signaling pathway // inferred from sequence or structural similarity /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from sequence or structural similarity","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004697 // protein kinase C activity // inferred from electronic annotation /// 0004697 // protein kinase C activity // traceable author statement /// 0005080 // protein kinase C binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0030374 // ligand-dependent nuclear receptor transcription coactivator activity // inferred from mutant phenotype /// 0035403 // histone kinase activity (H3-T6 specific) // inferred from direct assay /// 0042393 // histone binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050681 // androgen receptor binding // inferred from direct assay","chr16:23846527-24231932 (+) // 90.25 // p12.2"]
["11759355_x_at",-0.058099747,0.1638341,-0.033626556,-0.0074009895,0.0800848,0.0074009895,0.9923359,0.9735148,-1.0018448,-0.0026589797,1.0018448,"down","GPR32",2854.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004982 // N-formyl peptide receptor activity // inferred from electronic annotation","chr19:51273720-51275252 (+) // 84.38 // q13.33"]
["11720638_a_at",0.02309227,0.052075386,0.024090767,-0.029584885,-0.12913513,-0.02309227,0.38034177,0.05811194,1.0670962,0.09369028,1.0670962,"up","ACBD6",84320.0,"","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0000062 // fatty-acyl-CoA binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation","chr1:180257364-180472102 (-) // 92.92 // q25.2"]
["11743485_s_at",0.0146045685,-0.00659132,0.012378216,-0.023924828,-0.024389744,0.00659132,0.5496692,0.16651182,1.0144551,0.020704985,1.0144551,"up","NAA25",80018.0,"","0005737 // cytoplasm // inferred from electronic annotation","","chr12:112464492-112546826 (-) // 97.81 // q24.13"]
["11762983_a_at",0.121842384,-0.027798653,0.10170126,-0.2718358,0.027798653,-0.10441351,0.5182294,0.13952455,1.1339827,0.18139857,1.1339827,"up","MED25",81857.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0035563 // positive regulation of chromatin binding // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0048147 // negative regulation of fibroblast proliferation // inferred from mutant phenotype /// 0071158 // positive regulation of cell cycle arrest // inferred from mutant phenotype /// 2001178 // positive regulation of mediator complex assembly // inferred from mutant phenotype","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0042974 // retinoic acid receptor binding // inferred from physical interaction /// 0042974 // retinoic acid receptor binding // inferred from electronic annotation /// 0046965 // retinoid X receptor binding // inferred from physical interaction /// 0046965 // retinoid X receptor binding // inferred from electronic annotation","chr19:50321598-50340219 (+) // 100.0 // q13.33"]
["11731791_a_at",-0.02076745,-0.18922448,0.020767689,0.020767689,0.04954934,-0.03050685,0.6907269,0.32650638,-1.0543433,-0.07634475,1.0543433,"down","SLC27A6",28965.0,"0000038 // very long-chain fatty acid metabolic process // traceable author statement /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0015909 // long-chain fatty acid transport // traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0042383 // sarcolemma // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004467 // long-chain fatty acid-CoA ligase activity // traceable author statement /// 0016874 // ligase activity // inferred from electronic annotation /// 0031957 // very long-chain fatty acid-CoA ligase activity // inferred from electronic annotation","chr5:128300819-128369328 (+) // 96.5 // q23.3"]
["11742685_a_at",-0.0143351555,-0.03737116,0.06041956,0.014334679,-0.035754204,0.05566454,0.9476984,0.8404288,-1.0059165,-0.00851052,1.0059165,"down","LAMP2",3920.0,"0002576 // platelet degranulation // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0030168 // platelet activation // traceable author statement","0005764 // lysosome // inferred from direct assay /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from direct assay /// 0005770 // late endosome // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030670 // phagocytic vesicle membrane // inferred from electronic annotation /// 0031088 // platelet dense granule membrane // inferred from direct assay /// 0031088 // platelet dense granule membrane // traceable author statement /// 0031902 // late endosome membrane // inferred from direct assay","","chrX:119560002-119603201 (-) // 92.06 // q24"]
["11715314_at",0.05028057,-0.11638594,0.16245031,-0.12572336,-0.05028057,0.079298496,0.8280664,0.55766267,1.0456139,0.0643502,1.0456139,"up","","","","","","chr7:66136417-66148154 (+) // 96.52 // q11.21"]
["11747404_a_at",-0.0024471283,0.0024471283,0.15364742,0.04463148,-0.03582716,-0.009729385,0.7477295,0.41302285,1.0363592,0.05152411,1.0363592,"up","ZNF586",54807.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:58281019-58291912 (+) // 99.9 // q13.43"]
["11717364_a_at",0.02534008,-0.013075829,0.09415436,-0.006251335,-0.09805298,0.006251335,0.59392786,0.20804723,1.0483767,0.068157166,1.0483767,"up","BCL2L12",83596.0,"0006915 // apoptotic process // inferred from electronic annotation","","","chr19:50168398-50177173 (+) // 97.73 // q13.33"]
["11727026_a_at",-0.07155895,-0.043462753,0.18563175,0.043462753,0.16191292,-0.10286331,0.9779139,0.9287935,-1.0073982,-0.010634126,1.0073982,"down","NDUFB5",4711.0,"0006120 // mitochondrial electron transport, NADH to ubiquinone // non-traceable author statement /// 0006120 // mitochondrial electron transport, NADH to ubiquinone // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0022900 // electron transport chain // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005747 // mitochondrial respiratory chain complex I // inferred from direct assay /// 0005747 // mitochondrial respiratory chain complex I // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0070469 // respiratory chain // inferred from electronic annotation","0008137 // NADH dehydrogenase (ubiquinone) activity // non-traceable author statement /// 0008137 // NADH dehydrogenase (ubiquinone) activity // traceable author statement","chr3:179322581-179342288 (+) // 90.18 // q26.33"]
["11740871_a_at",0.09763336,0.13199401,-0.092116356,-0.020210266,-0.08175564,0.020210266,0.7320637,0.38913438,1.0519665,0.073088825,1.0519665,"up","MS4A7",58475.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation","chr11:60145957-60163424 (+) // 76.67 // q12.2"]
["11742007_x_at",-0.13659811,0.06092882,0.001698494,0.25003958,-0.0016980171,-0.040124416,0.7605416,0.43367955,-1.0673717,-0.0940627,1.0673717,"down","KRTAP12-2",353323.0,"","0005882 // intermediate filament // inferred from electronic annotation /// 0045095 // keratin filament // inferred from electronic annotation","","chr21:46086106-46086844 (-) // 96.98 // q22.3"]
["11757452_x_at",0.12509394,0.010356426,0.0071997643,-0.007200241,-0.09461975,-0.0075001717,0.5422913,0.15822576,1.0599455,0.08399004,1.0599455,"up","INO80B",83444.0,"0006281 // DNA repair // inferred from electronic annotation /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0031011 // Ino80 complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:74684458-74685071 (+) // 84.83 // p13.1"]
["11753433_a_at",-0.3736558,-0.4109807,0.08477783,0.08413696,-0.08413696,0.085785866,0.58238375,0.1963167,-1.1990414,-0.26188144,1.1990414,"down","C1orf216",127703.0,"","","","chr1:36181068-36184423 (-) // 100.0 // p34.3"]
["11722526_at",-0.16252518,0.024785995,0.076464176,-0.11191559,-0.024785995,0.06703138,0.99307215,0.97645074,1.0019416,0.0027983657,1.0019416,"up","PTPN21",11099.0,"0006470 // protein dephosphorylation // traceable author statement /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // traceable author statement /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005856 // cytoskeleton // traceable author statement","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation","chr14:88932121-89021123 (-) // 97.22 // q31.3"]
["11740913_a_at",-0.1277771,0.011927128,0.082737446,0.022008896,-0.011927128,-0.10478449,0.92985463,0.7911866,1.014332,0.020530015,1.014332,"up","SKOR1",390598.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // not recorded /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // not recorded /// 0030514 // negative regulation of BMP signaling pathway // inferred from direct assay","0005634 // nucleus // not recorded /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // not recorded /// 0030425 // dendrite // inferred from direct assay /// 0043025 // neuronal cell body // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0046332 // SMAD binding // inferred from physical interaction /// 0046332 // SMAD binding // inferred from electronic annotation","chr15:68118273-68126174 (+) // 86.78 // q23"]
["11750066_x_at",-0.010275841,0.010275364,-0.12586117,0.09827852,-0.068796635,0.11687374,0.6546215,0.2798683,-1.0649155,-0.09073901,1.0649155,"down","FLJ42709",441094.0,"","","","chr5:92746994-92916713 (-) // 89.21 // q15"]
["11752699_a_at",-0.0028390884,0.03942585,0.16474485,0.0028390884,-0.03906107,-0.056090355,0.518664,0.14005579,1.0702007,0.097881354,1.0702007,"up","ARHGEF4",50649.0,"0006915 // apoptotic process // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0030032 // lamellipodium assembly // inferred from mutant phenotype /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0035556 // intracellular signal transduction // non-traceable author statement /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0042060 // wound healing // inferred from direct assay /// 0045787 // positive regulation of cell cycle // inferred from direct assay /// 0046847 // filopodium assembly // inferred from mutant phenotype /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0050673 // epithelial cell proliferation // inferred from direct assay /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // non-traceable author statement /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005085 // guanyl-nucleotide exchange factor activity // inferred from mutant phenotype /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // non-traceable author statement /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0030676 // Rac guanyl-nucleotide exchange factor activity // inferred from mutant phenotype","chr2:131674537-131804281 (+) // 99.94 // q21.1"]
["11734184_a_at",0.15441632,0.0072155,0.057662487,-0.238585,-0.06918192,-0.0072157383,0.44824538,0.094277054,1.1313869,0.17809235,1.1313869,"up","PRDM5",11107.0,"0000278 // mitotic cell cycle // inferred from mutant phenotype /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0016575 // histone deacetylation // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0051567 // histone H3-K9 methylation // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0000976 // transcription regulatory region sequence-specific DNA binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070491 // repressing transcription factor binding // inferred from direct assay","chr4:121614918-121844013 (-) // 97.37 // q27"]
["11717932_at",-0.14073372,0.018990517,0.046827316,-0.03224659,0.12202549,-0.018990517,0.8290838,0.5599842,-1.0342379,-0.048568025,1.0342379,"down","TBK1",29110.0,"0002218 // activation of innate immune response // inferred from electronic annotation /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006468 // protein phosphorylation // non-traceable author statement /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006954 // inflammatory response // traceable author statement /// 0007249 // I-kappaB kinase/NF-kappaB cascade // traceable author statement /// 0008063 // Toll signaling pathway // traceable author statement /// 0009615 // response to virus // traceable author statement /// 0009615 // response to virus // inferred from electronic annotation /// 0010629 // negative regulation of gene expression // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0032480 // negative regulation of type I interferon production // traceable author statement /// 0032481 // positive regulation of type I interferon production // traceable author statement /// 0032606 // type I interferon production // traceable author statement /// 0032727 // positive regulation of interferon-alpha production // inferred from direct assay /// 0032728 // positive regulation of interferon-beta production // inferred from direct assay /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from expression pattern /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation /// 0045359 // positive regulation of interferon-beta biosynthetic process // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0050830 // defense response to Gram-positive bacterium // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0010008 // endosome membrane // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004672 // protein kinase activity // non-traceable author statement /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0051219 // phosphoprotein binding // inferred from physical interaction","chr12:64845659-64895894 (+) // 98.91 // q14.2"]
["11763173_s_at",-0.12522602,-0.0010404587,-0.09518719,0.0010404587,0.10485411,0.031036854,0.4051814,0.06940008,-1.0863295,-0.11946171,1.0863295,"down","PGM3",5238.0,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006041 // glucosamine metabolic process // non-traceable author statement /// 0006048 // UDP-N-acetylglucosamine biosynthetic process // not recorded /// 0006048 // UDP-N-acetylglucosamine biosynthetic process // inferred from electronic annotation /// 0006048 // UDP-N-acetylglucosamine biosynthetic process // traceable author statement /// 0006488 // dolichol-linked oligosaccharide biosynthetic process // traceable author statement /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0019255 // glucose 1-phosphate metabolic process // inferred from electronic annotation /// 0030097 // hemopoiesis // not recorded /// 0030097 // hemopoiesis // inferred from electronic annotation /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005829 // cytosol // not recorded /// 0005829 // cytosol // traceable author statement","0000287 // magnesium ion binding // inferred from electronic annotation /// 0004610 // phosphoacetylglucosamine mutase activity // inferred from direct assay /// 0004610 // phosphoacetylglucosamine mutase activity // inferred from electronic annotation /// 0004614 // phosphoglucomutase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation /// 0016868 // intramolecular transferase activity, phosphotransferases // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:83875908-83903633 (-) // 75.49 // q14.1"]
["11733519_a_at",-0.19041443,-0.19342852,-0.057547808,0.15049481,0.057547808,0.18670511,0.18972367,0.009170389,-1.213112,-0.27871275,1.213112,"down","KCNK10",54207.0,"0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0071805 // potassium ion transmembrane transport // traceable author statement /// 0071805 // potassium ion transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005267 // potassium channel activity // inferred from electronic annotation /// 0005267 // potassium channel activity // traceable author statement","chr14:88646453-88789595 (-) // 92.82 // q31.3"]
["11725803_a_at",-0.0068621635,0.0068621635,-0.011464119,-0.13431883,0.15197086,0.1765008,0.81413555,0.53044945,-1.0486542,-0.068539016,1.0486542,"down","C21orf91",54149.0,"","","","chr21:19161290-19191703 (-) // 97.48 // q21.1"]
["11732987_x_at",-0.1215055,0.114827156,0.0,-0.01459837,0.13697195,0.0,0.8629456,0.63391834,-1.0302663,-0.04301727,1.0302663,"down","IFNA6",3443.0,"0006952 // defense response // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0009615 // response to virus // non-traceable author statement /// 0009615 // response to virus // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0060337 // type I interferon-mediated signaling pathway // traceable author statement /// 0060338 // regulation of type I interferon-mediated signaling pathway // traceable author statement","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation","0005125 // cytokine activity // inferred from electronic annotation /// 0005126 // cytokine receptor binding // non-traceable author statement /// 0005126 // cytokine receptor binding // inferred from electronic annotation","chr9:21350316-21350886 (-) // 100.0 // p21.3"]
["11733294_at",0.040888786,0.02369833,-0.025997639,-0.02369833,-0.053643703,0.025998116,0.7286891,0.38391045,1.0209965,0.02997785,1.0209965,"up","PHF20L1",51105.0,"","","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:133787576-133825437 (+) // 96.07 // q24.22"]
["11744612_a_at",0.05413246,-0.03691578,0.029374123,0.026694298,-0.026694298,-0.044503212,0.7587941,0.4295662,1.0212703,0.03036472,1.0212703,"up","NUDCD1",84955.0,"","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","","chr8:110254909-110346347 (-) // 97.62 // q23.1"]
["11738934_at",-0.08401132,0.28130388,0.05229473,0.01205492,-0.020772457,-0.01205492,0.7680882,0.4471997,1.0644586,0.09011985,1.0644586,"up","GSX1",219409.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0021527 // spinal cord association neuron differentiation // inferred from electronic annotation /// 0021854 // hypothalamus development // inferred from electronic annotation /// 0021984 // adenohypophysis development // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048663 // neuron fate commitment // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr13:28366779-28368089 (+) // 92.68 // q12.2"]
["11727118_a_at",-0.07028127,0.11584544,-0.04102969,0.094456434,-0.018480062,0.0184803,0.882171,0.67628145,-1.0209938,-0.029974146,1.0209938,"down","CFP",5199.0,"0006955 // immune response // traceable author statement /// 0006956 // complement activation // traceable author statement /// 0006957 // complement activation, alternative pathway // traceable author statement /// 0006957 // complement activation, alternative pathway // inferred from electronic annotation /// 0030449 // regulation of complement activation // traceable author statement /// 0042742 // defense response to bacterium // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0031012 // extracellular matrix // inferred from direct assay","","chrX:47483611-47489704 (-) // 89.24 // p11.23"]
["11723196_at",-0.010710239,0.004254818,-0.015305996,0.043799877,0.06860399,-0.004254341,0.4952542,0.12270558,-1.0304708,-0.04330369,1.0304708,"down","C2orf15 /// MRPL30","150590 /// 51263","0006412 // translation // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005840 // ribosome // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003735 // structural constituent of ribosome // inferred from electronic annotation","chr2:99797541-99814351 (+) // 66.41 // q11.2"]
["11739399_s_at",0.0053043365,-0.07326889,0.091768265,-0.0053043365,0.028290749,-0.040991783,0.93346274,0.8007861,1.0097067,0.01393633,1.0097067,"up","C20orf194 /// UBE2F","140739 /// 25943","0045116 // protein neddylation // inferred from direct assay /// 0045116 // protein neddylation // inferred from electronic annotation","","0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation /// 0019788 // NEDD8 ligase activity // inferred from direct assay","chr2:238875586-238950957 (+) // 98.4 // q37.3"]
["11747089_a_at",-0.025198936,0.06124401,-0.017124176,0.017124176,-0.022001266,0.030286789,0.98502016,0.94891727,-1.0015004,-0.0021629515,1.0015004,"down","PTPRS",5802.0,"0006470 // protein dephosphorylation // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0021510 // spinal cord development // inferred from electronic annotation /// 0021549 // cerebellum development // inferred from electronic annotation /// 0021766 // hippocampus development // inferred from electronic annotation /// 0021987 // cerebral cortex development // inferred from electronic annotation /// 0022038 // corpus callosum development // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation","0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005001 // transmembrane receptor protein tyrosine phosphatase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation","chr19:5273074-5286399 (-) // 82.68 // p13.3"]
["11719967_at",0.053003788,0.003792286,-0.03439617,0.03714657,-0.010334015,-0.003791809,0.9981676,0.9947095,-1.0001434,-2.0688029E-4,1.0001434,"down","HTT",3064.0,"0000050 // urea cycle // inferred from electronic annotation /// 0000052 // citrulline metabolic process // inferred from electronic annotation /// 0000132 // establishment of mitotic spindle orientation // inferred from mutant phenotype /// 0006606 // protein import into nucleus // inferred from electronic annotation /// 0006839 // mitochondrial transport // inferred from electronic annotation /// 0006888 // ER to Golgi vesicle-mediated transport // inferred from electronic annotation /// 0006890 // retrograde vesicle-mediated transport, Golgi to ER // inferred from mutant phenotype /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from electronic annotation /// 0007005 // mitochondrion organization // inferred from electronic annotation /// 0007029 // endoplasmic reticulum organization // inferred from electronic annotation /// 0007030 // Golgi organization // inferred from mutant phenotype /// 0007212 // dopamine receptor signaling pathway // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0007369 // gastrulation // inferred from electronic annotation /// 0007417 // central nervous system development // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0007569 // cell aging // inferred from electronic annotation /// 0007610 // behavior // inferred from electronic annotation /// 0007611 // learning or memory // inferred from electronic annotation /// 0007612 // learning // inferred from electronic annotation /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0008088 // axon cargo transport // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0008306 // associative learning // inferred from electronic annotation /// 0008340 // determination of adult lifespan // inferred from electronic annotation /// 0008542 // visual learning // inferred from electronic annotation /// 0009653 // anatomical structure morphogenesis // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0016197 // endosomal transport // inferred from electronic annotation /// 0019244 // lactate biosynthetic process from pyruvate // inferred from electronic annotation /// 0019805 // quinolinate biosynthetic process // inferred from electronic annotation /// 0021756 // striatum development // inferred from electronic annotation /// 0021988 // olfactory lobe development // inferred from electronic annotation /// 0021990 // neural plate formation // inferred from electronic annotation /// 0022008 // neurogenesis // inferred from electronic annotation /// 0030072 // peptide hormone secretion // inferred from electronic annotation /// 0030073 // insulin secretion // inferred from electronic annotation /// 0034047 // regulation of protein phosphatase type 2A activity // inferred from mutant phenotype /// 0035176 // social behavior // inferred from electronic annotation /// 0042445 // hormone metabolic process // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0046902 // regulation of mitochondrial membrane permeability // inferred from electronic annotation /// 0047496 // vesicle transport along microtubule // inferred from mutant phenotype /// 0047496 // vesicle transport along microtubule // inferred from electronic annotation /// 0048167 // regulation of synaptic plasticity // inferred from electronic annotation /// 0048341 // paraxial mesoderm formation // inferred from electronic annotation /// 0048513 // organ development // not recorded /// 0048666 // neuron development // inferred from electronic annotation /// 0051402 // neuron apoptotic process // inferred from electronic annotation /// 0051592 // response to calcium ion // inferred from electronic annotation /// 0051881 // regulation of mitochondrial membrane potential // inferred from electronic annotation /// 0051938 // L-glutamate import // inferred from electronic annotation /// 0055072 // iron ion homeostasis // inferred from electronic annotation /// 2001237 // negative regulation of extrinsic apoptotic signaling pathway // inferred from mutant phenotype","0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005770 // late endosome // inferred from direct assay /// 0005776 // autophagic vacuole // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0016234 // inclusion body // inferred from electronic annotation /// 0030424 // axon // inferred from direct assay /// 0030424 // axon // inferred from electronic annotation /// 0030425 // dendrite // inferred from direct assay /// 0030659 // cytoplasmic vesicle membrane // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay","0002039 // p53 binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // not recorded /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0034452 // dynactin binding // inferred from physical interaction /// 0045505 // dynein intermediate chain binding // inferred from direct assay /// 0048487 // beta-tubulin binding // inferred from direct assay /// 0050809 // diazepam binding // inferred from electronic annotation","chr4:3076236-3245684 (+) // 97.61 // p16.3"]
["11742227_at",0.054710865,0.006178856,-0.092319965,-0.006178856,0.012493134,-0.16235232,0.8408518,0.58645374,1.029209,0.041536003,1.029209,"up","CLDN22",53842.0,"0016338 // calcium-independent cell-cell adhesion // inferred from sequence or structural similarity /// 0034329 // cell junction assembly // traceable author statement /// 0045216 // cell-cell junction organization // traceable author statement /// 0070830 // tight junction assembly // traceable author statement","0005886 // plasma membrane // inferred from electronic annotation /// 0005923 // tight junction // inferred from sequence or structural similarity /// 0005923 // tight junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","0005198 // structural molecule activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from sequence or structural similarity","chr4:184239219-184241927 (-) // 98.86 // q35.1"]
["11744134_at",-0.00894928,-0.013736725,0.0071907043,-0.0071907043,0.011872292,0.018161774,0.64444923,0.26663852,-1.0088974,-0.0127795,1.0088974,"down","ZSWIM6",57688.0,"","","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr5:60628099-60841999 (+) // 91.81 // q12.1"]
["11716818_a_at",-0.004875183,-0.0047881603,0.09630418,0.0047881603,0.36741877,-0.042675495,0.83629864,0.5778392,-1.0577242,-0.080963545,1.0577242,"down","VSIG4",11326.0,"0006957 // complement activation, alternative pathway // inferred from electronic annotation /// 0032703 // negative regulation of interleukin-2 production // inferred from electronic annotation /// 0042130 // negative regulation of T cell proliferation // inferred from electronic annotation /// 0045087 // innate immune response // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chrX:65241579-65259967 (-) // 98.46 // q12"]
["11741873_a_at",-0.017288208,0.009127617,0.06206894,-0.026493073,0.03316307,-0.009127617,0.82710075,0.5561862,1.0131085,0.018788679,1.0131085,"up","CSNK1E",1454.0,"0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006468 // protein phosphorylation // inferred from sequence or structural similarity /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030178 // negative regulation of Wnt receptor signaling pathway // inferred from electronic annotation /// 0032436 // positive regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from sequence or structural similarity /// 0034613 // cellular protein localization // inferred from electronic annotation /// 0090263 // positive regulation of canonical Wnt receptor signaling pathway // inferred from electronic annotation","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from sequence or structural similarity /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr22:38686697-38714089 (-) // 92.37 // q13.1"]
["11763684_x_at",-0.15290403,-0.040168285,-0.10205841,0.040168285,0.15517569,0.18899536,0.23342197,0.015178689,-1.1699849,-0.22648995,1.1699849,"down","IGK@ /// IGKC","3514 /// 50802","0006955 // immune response // non-traceable author statement /// 0006956 // complement activation // traceable author statement /// 0006958 // complement activation, classical pathway // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0050776 // regulation of immune response // traceable author statement","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005886 // plasma membrane // traceable author statement","0003823 // antigen binding // non-traceable author statement /// 0003823 // antigen binding // inferred from electronic annotation","chr2:89246821-89246950 (-) // 99.22 // p11.2"]
["11719431_a_at",0.011405945,0.024716854,0.117593765,-0.017702103,-0.011405468,-0.023447037,0.47530425,0.109992884,1.0488127,0.068757124,1.0488127,"up","TMC6",11322.0,"","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr17:76106543-76124866 (-) // 90.7 // q25.3"]
["11736477_a_at",-0.13389587,-0.0038814545,-0.06835747,0.020992279,0.13343334,0.0038814545,0.44653964,0.09305056,-1.0878507,-0.121480554,1.0878507,"down","ELL2",22936.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006368 // transcription elongation from RNA polymerase II promoter // inferred from electronic annotation /// 0006368 // transcription elongation from RNA polymerase II promoter // traceable author statement /// 0006414 // translational elongation // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0008023 // transcription elongation factor complex // inferred from electronic annotation /// 0008023 // transcription elongation factor complex // traceable author statement","0003746 // translation elongation factor activity // inferred from electronic annotation","chr5:95220804-95297982 (-) // 94.81 // q15"]
["11723114_s_at",0.0012049675,-0.1283083,-0.0012054443,0.034030914,0.056058407,-0.0012054443,0.575681,0.18994734,-1.0514627,-0.072397605,1.0514627,"down","CENPC1",1060.0,"0000087 // M phase of mitotic cell cycle // traceable author statement /// 0000236 // mitotic prometaphase // traceable author statement /// 0000278 // mitotic cell cycle // inferred from mutant phenotype /// 0000278 // mitotic cell cycle // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007059 // chromosome segregation // inferred from mutant phenotype /// 0007067 // mitosis // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 0051382 // kinetochore assembly // inferred from mutant phenotype","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from direct assay /// 0000776 // kinetochore // inferred from electronic annotation /// 0000776 // kinetochore // traceable author statement /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0000780 // condensed nuclear chromosome, centromeric region // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005721 // centromeric heterochromatin // inferred from direct assay /// 0005829 // cytosol // traceable author statement","0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement","chr4:68337520-68411324 (-) // 90.09 // q13.2"]
["11744031_at",-0.013223648,-0.040789127,0.013223648,0.07602453,-0.054772377,0.032122612,0.7934688,0.4913,-1.0219948,-0.031387895,1.0219948,"down","MMP7",4316.0,"0002779 // antibacterial peptide secretion // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0006508 // proteolysis // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0030574 // collagen catabolic process // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042742 // defense response to bacterium // inferred from electronic annotation /// 0050829 // defense response to Gram-negative bacterium // inferred from electronic annotation /// 0050830 // defense response to Gram-positive bacterium // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0031012 // extracellular matrix // inferred from electronic annotation","0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0004222 // metalloendopeptidase activity // traceable author statement /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:102391238-102401483 (-) // 83.18 // q22.2"]
["11738800_a_at",-0.2984991,-0.018684864,0.05048895,0.17935514,-0.13754702,0.018684864,0.78883183,0.48106045,-1.0785273,-0.10906274,1.0785273,"down","BRWD3",254065.0,"0007010 // cytoskeleton organization // inferred from mutant phenotype /// 0008360 // regulation of cell shape // inferred from mutant phenotype","","","chrX:79931682-80065233 (-) // 95.44 // q21.1"]
["11726628_a_at",-0.036905766,0.01005125,-0.12909079,-0.01005125,0.049024582,0.087807655,0.5055325,0.13136263,-1.0675044,-0.09424202,1.0675044,"down","SEMA4A",64218.0,"0001525 // angiogenesis // inferred from electronic annotation /// 0002292 // T cell differentiation involved in immune response // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007409 // axonogenesis // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0010594 // regulation of endothelial cell migration // inferred from electronic annotation /// 0016525 // negative regulation of angiogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045063 // T-helper 1 cell differentiation // inferred from electronic annotation /// 0071526 // semaphorin-plexin signaling pathway // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation","chr1:156119473-156147613 (+) // 97.22 // q22"]
["11736073_a_at",0.16306591,0.04322529,0.07861376,-0.0792079,-0.20830965,-0.04322529,0.29405117,0.028841855,1.1528589,0.20521589,1.1528589,"up","ALDH1B1",219.0,"0005975 // carbohydrate metabolic process // non-traceable author statement /// 0006068 // ethanol catabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0004029 // aldehyde dehydrogenase (NAD) activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016620 // oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor // inferred from electronic annotation","chr9:38392646-38398655 (+) // 69.23 // p13.2"]
["11750741_a_at",-0.004930973,0.1313901,0.015347481,-0.048524857,0.004930496,-0.0060224533,0.6180774,0.23334159,1.0452209,0.06380781,1.0452209,"up","TAB2",23118.0,"0000187 // activation of MAPK activity // traceable author statement /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0007249 // I-kappaB kinase/NF-kappaB cascade // traceable author statement /// 0007254 // JNK cascade // traceable author statement /// 0007507 // heart development // inferred from mutant phenotype /// 0008063 // Toll signaling pathway // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from expression pattern /// 0045087 // innate immune response // traceable author statement /// 0045860 // positive regulation of protein kinase activity // inferred from direct assay /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0051092 // positive regulation of NF-kappaB transcription factor activity // traceable author statement /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0070423 // nucleotide-binding oligomerization domain containing signaling pathway // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0010008 // endosome membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070530 // K63-linked polyubiquitin binding // inferred from direct assay","chr6:149539776-149731075 (+) // 98.5 // q25.1"]
["11761977_at",0.18917012,-0.028375149,0.10770917,-0.0881412,0.028375149,-0.11865544,0.50104105,0.12758122,1.1087816,0.1489752,1.1087816,"up","CCDC171",203238.0,"","","","chr9:15552871-15660144 (+) // 74.54 // p22.3"]
["11734735_a_at",0.024103642,0.03932619,-0.024103642,-0.08661318,0.037092686,-0.112151146,0.63124985,0.25045666,1.0475355,0.06699919,1.0475355,"up","FAR1",84188.0,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0008611 // ether lipid biosynthetic process // traceable author statement /// 0010025 // wax biosynthetic process // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005777 // peroxisome // inferred from electronic annotation /// 0005778 // peroxisomal membrane // inferred from direct assay /// 0005778 // peroxisomal membrane // inferred from electronic annotation /// 0005782 // peroxisomal matrix // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016620 // oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0050062 // long-chain-fatty-acyl-CoA reductase activity // inferred from electronic annotation","chr11:13689891-13753889 (+) // 97.59 // p15.2"]
["11733221_a_at",0.014454365,-0.052875996,0.07120609,-0.014454365,0.049256325,-0.06761503,0.88383573,0.6801359,1.0152717,0.021865811,1.0152717,"up","DLL3",10683.0,"0001501 // skeletal system development // inferred from mutant phenotype /// 0001501 // skeletal system development // inferred from electronic annotation /// 0001756 // somitogenesis // inferred from electronic annotation /// 0007219 // Notch signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007386 // compartment pattern specification // inferred from electronic annotation /// 0007417 // central nervous system development // inferred from electronic annotation /// 0009888 // tissue development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045746 // negative regulation of Notch signaling pathway // inferred from electronic annotation /// 0048339 // paraxial mesoderm development // inferred from electronic annotation /// 0048712 // negative regulation of astrocyte differentiation // inferred from electronic annotation /// 0050768 // negative regulation of neurogenesis // inferred from electronic annotation /// 0050769 // positive regulation of neurogenesis // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0005112 // Notch binding // non-traceable author statement /// 0005112 // Notch binding // inferred from electronic annotation","chr19:39989544-39999109 (+) // 98.51 // q13.2"]
["11751682_a_at",0.007091999,0.03859663,0.05549574,-0.007091999,-0.11679602,-0.05960846,0.3667541,0.052226916,1.0679866,0.09489355,1.0679866,"up","RNASEH2C",84153.0,"0006401 // RNA catabolic process // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0032299 // ribonuclease H2 complex // inferred from direct assay /// 0032299 // ribonuclease H2 complex // inferred from electronic annotation","","chr11:65486718-65488269 (-) // 99.9 // q13.1"]
["11726236_at",-0.02349925,-0.010683775,-0.010683775,0.17540812,0.010683775,0.21095395,0.4177544,0.075820796,-1.107498,-0.14730416,1.107498,"down","ACY3",91703.0,"0008152 // metabolic process // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation","0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation","0004046 // aminoacylase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016788 // hydrolase activity, acting on ester bonds // inferred from electronic annotation /// 0016811 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:67410025-67418419 (-) // 94.84 // q13.2"]
["11762876_x_at",-0.17558289,0.0060987473,4.1913986E-4,-4.1913986E-4,0.33537292,-0.045538425,0.6848022,0.3181831,-1.1117457,-0.15282685,1.1117457,"down","CAPRIN2",65981.0,"0017148 // negative regulation of translation // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0032092 // positive regulation of protein binding // inferred from direct assay /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from direct assay /// 0040008 // regulation of growth // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0050775 // positive regulation of dendrite morphogenesis // inferred from sequence or structural similarity /// 0061003 // positive regulation of dendritic spine morphogenesis // inferred from sequence or structural similarity /// 0090263 // positive regulation of canonical Wnt receptor signaling pathway // inferred from direct assay","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0043235 // receptor complex // inferred from direct assay","0003723 // RNA binding // inferred from electronic annotation /// 0005102 // receptor binding // inferred from physical interaction","chr12:30881312-30884382 (-) // 81.15 // p11.21"]
["11760155_a_at",-0.006711483,0.07369566,-0.10535669,-0.039981365,0.00985384,0.006711006,0.97882813,0.9311698,-1.0034616,-0.0049854084,1.0034616,"down","FUBP1",8880.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0010628 // positive regulation of gene expression // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003697 // single-stranded DNA binding // traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation","chr1:78412168-78444753 (-) // 95.98 // p31.1"]
["11718703_a_at",0.03256035,0.05038643,-0.061767578,-0.032560825,-0.11485767,0.13330936,0.96438986,0.8913644,1.0081867,0.011762825,1.0081867,"up","INO80E",283899.0,"0006281 // DNA repair // inferred from electronic annotation /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0031011 // Ino80 complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr16:30006913-30017111 (+) // 95.02 // p11.2"]
["11721498_a_at",0.029986382,-0.05672264,0.040941715,-0.001431942,-0.11163998,0.001431942,0.7609513,0.43474895,1.0295033,0.041948516,1.0295033,"up","TPST2",8459.0,"0006478 // peptidyl-tyrosine sulfation // traceable author statement","0000139 // Golgi membrane // inferred from electronic annotation /// 0005624 // membrane fraction // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008476 // protein-tyrosine sulfotransferase activity // inferred from electronic annotation /// 0008476 // protein-tyrosine sulfotransferase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation","chr22:26920696-26961370 (-) // 70.34 // q12.1"]
["11732329_a_at",-0.0124492645,0.012448788,-0.1377554,0.06746626,-0.07865429,0.097483635,0.71041954,0.3555304,-1.0531303,-0.074683905,1.0531303,"down","MAP7D1",55700.0,"","0005737 // cytoplasm // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation","","chr1:36621801-36646448 (+) // 93.77 // p34.3"]
["11741461_a_at",0.028289795,-0.028289795,-0.02994299,0.24406528,-0.105903625,0.060145855,0.7982456,0.50058377,-1.0541525,-0.07608358,1.0541525,"down","PCDHGB2",56103.0,"0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr5:140739639-140742196 (+) // 99.96 // q31.3"]
["11744077_at",0.028007507,-2.7656555E-4,2.7656555E-4,-0.014257431,-0.039661407,0.015649796,0.6697225,0.29865324,1.0154309,0.022092106,1.0154309,"up","ARPC1B",10095.0,"0006928 // cellular component movement // traceable author statement /// 0030833 // regulation of actin filament polymerization // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005885 // Arp2/3 protein complex // traceable author statement /// 0015629 // actin cytoskeleton // traceable author statement","0003779 // actin binding // inferred from electronic annotation /// 0005200 // structural constituent of cytoskeleton // traceable author statement","chr7:98972349-98992421 (+) // 71.18 // q22.1"]
["11717561_s_at",-0.046300888,-0.11839771,-0.05125332,0.046300888,0.0659399,0.06958485,0.16148068,0.0055231126,-1.0962619,-0.13259245,1.0962619,"down","DTX3L",151636.0,"0006974 // response to DNA damage stimulus // inferred from mutant phenotype /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0010390 // histone monoubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0042393 // histone binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:122283084-122294050 (+) // 70.69 // q21.1"]
["11743116_s_at",0.056767464,0.06764221,0.038315773,-0.094599724,-0.038315773,-0.1041069,0.14226651,0.0039048619,1.0967611,0.13324931,1.0967611,"up","KPNB1",3837.0,"0000060 // protein import into nucleus, translocation // traceable author statement /// 0006309 // apoptotic DNA fragmentation // traceable author statement /// 0006606 // protein import into nucleus // inferred from direct assay /// 0006606 // protein import into nucleus // inferred from electronic annotation /// 0006607 // NLS-bearing substrate import into nucleus // traceable author statement /// 0006610 // ribosomal protein import into nucleus // inferred from direct assay /// 0006610 // ribosomal protein import into nucleus // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006921 // cellular component disassembly involved in apoptotic process // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016032 // viral reproduction // traceable author statement /// 0019058 // viral infectious cycle // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0046796 // viral genome transport in host cell // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005643 // nuclear pore // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0031965 // nuclear membrane // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008139 // nuclear localization sequence binding // traceable author statement /// 0008270 // zinc ion binding // traceable author statement /// 0008565 // protein transporter activity // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from physical interaction","chr17:45726830-45762180 (+) // 88.4 // q21.32"]
["11760895_a_at",-0.011571407,0.02051568,-0.248384,-0.003604889,0.0036046505,0.11141443,0.6503935,0.27517158,-1.0844408,-0.11695133,1.0844408,"down","SLC29A1",2030.0,"0006139 // nucleobase-containing compound metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007595 // lactation // inferred from electronic annotation /// 0015858 // nucleoside transport // inferred from direct assay /// 0015858 // nucleoside transport // inferred from electronic annotation /// 0015858 // nucleoside transport // traceable author statement /// 0015862 // uridine transport // inferred from electronic annotation /// 0030431 // sleep // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0060079 // regulation of excitatory postsynaptic membrane potential // inferred from electronic annotation /// 0071333 // cellular response to glucose stimulus // inferred from electronic annotation /// 0071456 // cellular response to hypoxia // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from direct assay /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from direct assay /// 0016324 // apical plasma membrane // inferred from electronic annotation","0005337 // nucleoside transmembrane transporter activity // inferred from electronic annotation /// 0005337 // nucleoside transmembrane transporter activity // traceable author statement","chr6:44194364-44201181 (+) // 85.54 // p21.1"]
["11728590_a_at",-0.040037155,0.019604683,-0.16471863,0.07205963,-0.019604206,0.046818733,0.58003044,0.19389538,-1.0679235,-0.09480836,1.0679235,"down","TMEM180",79847.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr10:104221169-104236802 (+) // 81.95 // q24.32"]
["11749453_x_at",-0.13419008,0.034980297,-0.15647936,-0.03497982,0.12435627,0.2142744,0.4921127,0.12028882,-1.1379575,-0.18644662,1.1379575,"down","ZFYVE27",118813.0,"0008219 // cell death // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from direct assay /// 0048011 // nerve growth factor receptor signaling pathway // inferred from sequence or structural similarity /// 0072659 // protein localization in plasma membrane // inferred from sequence or structural similarity","0005768 // endosome // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030424 // axon // inferred from sequence or structural similarity /// 0030425 // dendrite // inferred from sequence or structural similarity /// 0032584 // growth cone membrane // inferred from sequence or structural similarity /// 0032584 // growth cone membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0055038 // recycling endosome membrane // inferred from sequence or structural similarity /// 0055038 // recycling endosome membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr10:99496877-99519260 (+) // 98.13 // q24.2"]
["11736124_a_at",-0.020373821,-0.116233826,-0.19047451,0.058258057,0.03985262,0.020373821,0.33905825,0.04218879,-1.1084335,-0.1485222,1.1084335,"down","CPLX2",10814.0,"0006810 // transport // inferred from electronic annotation /// 0006836 // neurotransmitter transport // inferred from electronic annotation /// 0006887 // exocytosis // inferred from electronic annotation /// 0006904 // vesicle docking involved in exocytosis // traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0016079 // synaptic vesicle exocytosis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0031915 // positive regulation of synaptic plasticity // inferred from sequence or structural similarity /// 0031915 // positive regulation of synaptic plasticity // inferred from electronic annotation /// 0043303 // mast cell degranulation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0031201 // SNARE complex // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0000149 // SNARE binding // inferred from electronic annotation /// 0017075 // syntaxin-1 binding // inferred from electronic annotation /// 0019905 // syntaxin binding // inferred from electronic annotation","chr5:175223010-175311024 (+) // 93.99 // q35.2"]
["11726291_a_at",-0.056375742,-0.028060913,0.1804657,0.032817125,0.028060913,-0.05299735,0.90523154,0.73105764,1.0205754,0.029382778,1.0205754,"up","LRRC17",10234.0,"0001503 // ossification // inferred from electronic annotation /// 0001649 // osteoblast differentiation // inferred from sequence or structural similarity /// 0033687 // osteoblast proliferation // inferred from sequence or structural similarity /// 0045671 // negative regulation of osteoclast differentiation // inferred from sequence or structural similarity /// 0045671 // negative regulation of osteoclast differentiation // inferred from electronic annotation /// 0048539 // bone marrow development // inferred from sequence or structural similarity /// 0048539 // bone marrow development // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from sequence or structural similarity /// 0005615 // extracellular space // inferred from electronic annotation","","chr7:102553343-102585540 (+) // 97.74 // q22.1"]
["11758239_s_at",-0.0383358,0.012350559,-0.056192875,0.054414272,-0.012350559,0.05553198,0.4919822,0.120151564,-1.0424113,-0.059924666,1.0424113,"down","C9orf72",203228.0,"0008219 // cell death // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","","chr9:27547784-27548451 (-) // 97.01 // p21.2"]
["11761765_at",0.27307272,-0.039456844,-0.034321785,0.034321785,0.13550091,-0.0652647,0.9344391,0.80299735,1.02213,0.031578716,1.02213,"up","HOXA2",3199.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001709 // cell fate determination // inferred from electronic annotation /// 0002076 // osteoblast development // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007379 // segment specification // inferred from electronic annotation /// 0007389 // pattern specification process // inferred from electronic annotation /// 0008045 // motor axon guidance // inferred from electronic annotation /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0009953 // dorsal/ventral pattern formation // inferred from electronic annotation /// 0021568 // rhombomere 2 development // inferred from electronic annotation /// 0021569 // rhombomere 3 development // inferred from electronic annotation /// 0021658 // rhombomere 3 morphogenesis // inferred from electronic annotation /// 0035284 // brain segmentation // inferred from electronic annotation /// 0042474 // middle ear morphogenesis // inferred from electronic annotation /// 0045165 // cell fate commitment // inferred from electronic annotation /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048703 // embryonic viscerocranium morphogenesis // inferred from electronic annotation /// 0048704 // embryonic skeletal system morphogenesis // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr7:27141236-27142302 (-) // 92.69 // p15.2"]
["11717741_x_at",0.003850937,-0.01710701,0.14222145,0.014543533,-0.003850937,-0.008395195,0.7697886,0.44991997,1.029699,0.042222627,1.029699,"up","FUCA2",2519.0,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006004 // fucose metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004560 // alpha-L-fucosidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity, acting on glycosyl bonds // inferred from electronic annotation /// 0043169 // cation binding // inferred from electronic annotation","chr6:143816063-143833027 (-) // 74.62 // q24.2"]
["11730896_a_at",-0.1472373,0.04949522,-0.019359589,0.028402805,0.019359112,-0.044315338,0.8253184,0.55232006,-1.028244,-0.04018268,1.028244,"down","MAPKAPK2",9261.0,"0000165 // MAPK cascade // traceable author statement /// 0000187 // activation of MAPK activity // traceable author statement /// 0002224 // toll-like receptor signaling pathway // inferred from sequence or structural similarity /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002224 // toll-like receptor signaling pathway // inferred from electronic annotation /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006692 // prostanoid metabolic process // traceable author statement /// 0006950 // response to stress // inferred from direct assay /// 0006954 // inflammatory response // inferred from sequence or structural similarity /// 0006954 // inflammatory response // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from mutant phenotype /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007265 // Ras protein signal transduction // traceable author statement /// 0008063 // Toll signaling pathway // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from direct assay /// 0019370 // leukotriene biosynthetic process // traceable author statement /// 0031572 // G2/M transition DNA damage checkpoint // inferred from mutant phenotype /// 0032496 // response to lipopolysaccharide // inferred from sequence or structural similarity /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0032675 // regulation of interleukin-6 production // inferred from sequence or structural similarity /// 0032675 // regulation of interleukin-6 production // inferred from electronic annotation /// 0032680 // regulation of tumor necrosis factor production // inferred from direct assay /// 0032680 // regulation of tumor necrosis factor production // inferred from electronic annotation /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0035924 // cellular response to vascular endothelial growth factor stimulus // inferred from mutant phenotype /// 0044281 // small molecule metabolic process // traceable author statement /// 0044351 // macropinocytosis // inferred from sequence or structural similarity /// 0044351 // macropinocytosis // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0048010 // vascular endothelial growth factor receptor signaling pathway // inferred from mutant phenotype /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048255 // mRNA stabilization // inferred from electronic annotation /// 0048839 // inner ear development // inferred from electronic annotation /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0070935 // 3'-UTR-mediated mRNA stabilization // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004871 // signal transducer activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr1:206858288-206907626 (+) // 87.6 // q32.1"]
["11745315_a_at",0.059179306,0.017703056,0.037765503,-0.09688234,-0.12749338,-0.017703056,0.28688797,0.026939008,1.0859133,0.11890892,1.0859133,"up","CTNNAL1",8727.0,"0007155 // cell adhesion // inferred from electronic annotation /// 0007266 // Rho protein signal transduction // inferred from direct assay","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005198 // structural molecule activity // inferred from electronic annotation /// 0045296 // cadherin binding // inferred from electronic annotation","chr9:111704894-111775778 (-) // 99.75 // q31.3"]
["11719825_a_at",-0.15437508,0.037292004,0.070858,0.038697243,-0.15149689,-0.037291527,0.8997866,0.7180217,1.0242884,0.034622002,1.0242884,"up","ZAK",51776.0,"0000075 // cell cycle checkpoint // inferred from direct assay /// 0000077 // DNA damage checkpoint // inferred from mutant phenotype /// 0000165 // MAPK cascade // inferred from electronic annotation /// 0000186 // activation of MAPKK activity // inferred from direct assay /// 0000186 // activation of MAPKK activity // traceable author statement /// 0000186 // activation of MAPKK activity // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006950 // response to stress // non-traceable author statement /// 0007010 // cytoskeleton organization // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from mutant phenotype /// 0007243 // intracellular protein kinase cascade // inferred from direct assay /// 0007243 // intracellular protein kinase cascade // inferred from electronic annotation /// 0007257 // activation of JUN kinase activity // inferred from direct assay /// 0008219 // cell death // non-traceable author statement /// 0008283 // cell proliferation // non-traceable author statement /// 0009314 // response to radiation // inferred from direct assay /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030154 // cell differentiation // non-traceable author statement /// 0043065 // positive regulation of apoptotic process // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from direct assay /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004709 // MAP kinase kinase kinase activity // inferred from direct assay /// 0004709 // MAP kinase kinase kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:173940555-174091874 (+) // 80.78 // q31.1"]
["11741083_x_at",-0.007112503,0.023118973,0.034435272,-0.023030281,0.007112503,-0.06256294,0.5235889,0.14375933,1.0302355,0.0429742,1.0302355,"up","EIF4G2",1982.0,"0006412 // translation // inferred from direct assay /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred from direct assay /// 0006413 // translational initiation // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006446 // regulation of translational initiation // inferred from direct assay /// 0007050 // cell cycle arrest // traceable author statement /// 0008219 // cell death // traceable author statement /// 0016070 // RNA metabolic process // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016281 // eukaryotic translation initiation factor 4F complex // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003743 // translation initiation factor activity // inferred from direct assay /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008135 // translation factor activity, nucleic acid binding // inferred from direct assay /// 0008135 // translation factor activity, nucleic acid binding // traceable author statement","chr11:10818592-10830582 (-) // 98.37 // p15.3"]
["11724046_a_at",0.06550026,0.015675545,0.19486332,-0.110238075,-0.07069683,-0.015675545,0.38128227,0.058513537,1.1153913,0.15754986,1.1153913,"up","BID",637.0,"0001836 // release of cytochrome c from mitochondria // inferred from direct assay /// 0001836 // release of cytochrome c from mitochondria // inferred from electronic annotation /// 0006626 // protein targeting to mitochondrion // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0008625 // induction of apoptosis via death domain receptors // traceable author statement /// 0008629 // induction of apoptosis by intracellular signals // traceable author statement /// 0008633 // activation of pro-apoptotic gene products // traceable author statement /// 0008637 // apoptotic mitochondrial changes // traceable author statement /// 0008637 // apoptotic mitochondrial changes // inferred from electronic annotation /// 0032355 // response to estradiol stimulus // inferred from electronic annotation /// 0032461 // positive regulation of protein oligomerization // inferred from direct assay /// 0032464 // positive regulation of protein homooligomerization // inferred from direct assay /// 0032464 // positive regulation of protein homooligomerization // inferred from electronic annotation /// 0034349 // glial cell apoptotic process // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0046902 // regulation of mitochondrial membrane permeability // inferred from electronic annotation /// 0051260 // protein homooligomerization // inferred from electronic annotation /// 0051402 // neuron apoptotic process // traceable author statement /// 0090150 // establishment of protein localization in membrane // inferred from direct assay /// 0090200 // positive regulation of release of cytochrome c from mitochondria // inferred from genetic interaction /// 0090200 // positive regulation of release of cytochrome c from mitochondria // inferred from mutant phenotype /// 0090200 // positive regulation of release of cytochrome c from mitochondria // inferred from electronic annotation /// 2000045 // regulation of G1/S transition of mitotic cell cycle // inferred from electronic annotation /// 2001238 // positive regulation of extrinsic apoptotic signaling pathway // inferred from mutant phenotype","0005624 // membrane fraction // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation /// 0032592 // integral to mitochondrial membrane // inferred from electronic annotation","0005123 // death receptor binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from electronic annotation","chr22:18216907-18256813 (-) // 99.14 // q11.21"]
["11732377_a_at",0.038710117,0.045558453,-0.013219357,0.013219357,-0.023849964,-0.035640717,0.559405,0.17407864,1.0274775,0.039106805,1.0274775,"up","BROX",148362.0,"","0016020 // membrane // inferred from electronic annotation","","chr1:222885894-222906109 (+) // 98.77 // q41"]
["11749480_a_at",0.011870384,-0.03303528,0.061935425,-0.09120464,-0.010447502,0.010447502,0.70617616,0.34773782,1.0309623,0.043991644,1.0309623,"up","LONP1",9361.0,"0000002 // mitochondrial genome maintenance // non-traceable author statement /// 0001666 // response to hypoxia // inferred from expression pattern /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0006515 // misfolded or incompletely synthesized protein catabolic process // not recorded /// 0007005 // mitochondrion organization // inferred from mutant phenotype /// 0032042 // mitochondrial DNA metabolic process // non-traceable author statement /// 0034599 // cellular response to oxidative stress // inferred by curator /// 0034599 // cellular response to oxidative stress // inferred from direct assay /// 0051260 // protein homooligomerization // inferred from direct assay /// 0051603 // proteolysis involved in cellular protein catabolic process // inferred from direct assay /// 0070407 // oxidation-dependent protein catabolic process // inferred from mutant phenotype","0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // non-traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // inferred from mutant phenotype /// 0005759 // mitochondrial matrix // inferred from electronic annotation /// 0042645 // mitochondrial nucleoid // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003697 // single-stranded DNA binding // not recorded /// 0003697 // single-stranded DNA binding // inferred from electronic annotation /// 0003727 // single-stranded RNA binding // inferred from direct assay /// 0004176 // ATP-dependent peptidase activity // inferred from direct assay /// 0004176 // ATP-dependent peptidase activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // not recorded /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0043531 // ADP binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0051880 // G-quadruplex DNA binding // inferred from direct assay /// 0070182 // DNA polymerase binding // inferred from physical interaction /// 0070361 // mitochondrial light strand promoter anti-sense binding // inferred from direct assay /// 0070361 // mitochondrial light strand promoter anti-sense binding // inferred from electronic annotation /// 0070362 // mitochondrial heavy strand promoter anti-sense binding // inferred from direct assay /// 0070363 // mitochondrial light strand promoter sense binding // inferred from direct assay /// 0070364 // mitochondrial heavy strand promoter sense binding // inferred from direct assay","chr19:5691845-5720157 (-) // 96.88 // p13.3"]
["11716550_at",0.00976181,-0.0333395,-0.12370205,-0.00976181,0.09502125,0.1286583,0.46429223,0.103527874,-1.0870355,-0.1203991,1.0870355,"down","HES1",3280.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0003151 // outflow tract morphogenesis // inferred from sequence or structural similarity /// 0003151 // outflow tract morphogenesis // inferred from electronic annotation /// 0003266 // regulation of secondary heart field cardioblast proliferation // inferred from electronic annotation /// 0003281 // ventricular septum development // inferred from sequence or structural similarity /// 0003281 // ventricular septum development // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006461 // protein complex assembly // inferred from sequence or structural similarity /// 0006461 // protein complex assembly // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007219 // Notch signaling pathway // inferred from direct assay /// 0007219 // Notch signaling pathway // inferred from mutant phenotype /// 0007219 // Notch signaling pathway // traceable author statement /// 0007224 // smoothened signaling pathway // inferred from electronic annotation /// 0007262 // STAT protein import into nucleus // inferred from sequence or structural similarity /// 0007262 // STAT protein import into nucleus // inferred from electronic annotation /// 0007389 // pattern specification process // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from sequence or structural similarity /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0016477 // cell migration // inferred from electronic annotation /// 0021537 // telencephalon development // inferred from electronic annotation /// 0021555 // midbrain-hindbrain boundary morphogenesis // inferred from electronic annotation /// 0021557 // oculomotor nerve development // inferred from electronic annotation /// 0021558 // trochlear nerve development // inferred from electronic annotation /// 0021575 // hindbrain morphogenesis // inferred from electronic annotation /// 0021861 // forebrain radial glial cell differentiation // inferred from sequence or structural similarity /// 0021915 // neural tube development // inferred from electronic annotation /// 0021983 // pituitary gland development // inferred from electronic annotation /// 0021984 // adenohypophysis development // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0030513 // positive regulation of BMP signaling pathway // inferred from electronic annotation /// 0030901 // midbrain development // inferred from electronic annotation /// 0031016 // pancreas development // inferred from electronic annotation /// 0031018 // endocrine pancreas development // traceable author statement /// 0035019 // somatic stem cell maintenance // inferred from electronic annotation /// 0042102 // positive regulation of T cell proliferation // inferred from electronic annotation /// 0042491 // auditory receptor cell differentiation // inferred from electronic annotation /// 0042517 // positive regulation of tyrosine phosphorylation of Stat3 protein // inferred from sequence or structural similarity /// 0042517 // positive regulation of tyrosine phosphorylation of Stat3 protein // inferred from electronic annotation /// 0042668 // auditory receptor cell fate determination // inferred from electronic annotation /// 0043388 // positive regulation of DNA binding // inferred from sequence or structural similarity /// 0043388 // positive regulation of DNA binding // inferred from electronic annotation /// 0045165 // cell fate commitment // inferred from electronic annotation /// 0045596 // negative regulation of cell differentiation // inferred from electronic annotation /// 0045598 // regulation of fat cell differentiation // inferred from electronic annotation /// 0045608 // negative regulation of auditory receptor cell differentiation // inferred from electronic annotation /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0045747 // positive regulation of Notch signaling pathway // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046331 // lateral inhibition // inferred from electronic annotation /// 0046427 // positive regulation of JAK-STAT cascade // inferred from sequence or structural similarity /// 0046427 // positive regulation of JAK-STAT cascade // inferred from electronic annotation /// 0048469 // cell maturation // inferred from electronic annotation /// 0048505 // regulation of timing of cell differentiation // inferred from electronic annotation /// 0048538 // thymus development // inferred from sequence or structural similarity /// 0048538 // thymus development // inferred from electronic annotation /// 0048667 // cell morphogenesis involved in neuron differentiation // inferred from electronic annotation /// 0048711 // positive regulation of astrocyte differentiation // inferred from sequence or structural similarity /// 0048711 // positive regulation of astrocyte differentiation // inferred from electronic annotation /// 0048715 // negative regulation of oligodendrocyte differentiation // inferred from sequence or structural similarity /// 0048715 // negative regulation of oligodendrocyte differentiation // inferred from electronic annotation /// 0048844 // artery morphogenesis // inferred from sequence or structural similarity /// 0048844 // artery morphogenesis // inferred from electronic annotation /// 0050767 // regulation of neurogenesis // inferred from electronic annotation /// 0060037 // pharyngeal system development // inferred from sequence or structural similarity /// 0060037 // pharyngeal system development // inferred from electronic annotation /// 0060164 // regulation of timing of neuron differentiation // inferred from electronic annotation /// 0060253 // negative regulation of glial cell proliferation // inferred from sequence or structural similarity /// 0060253 // negative regulation of glial cell proliferation // inferred from electronic annotation /// 0060675 // ureteric bud morphogenesis // inferred from electronic annotation /// 0061009 // common bile duct development // inferred from electronic annotation /// 0061106 // negative regulation of stomach neuroendocrine cell differentiation // inferred from electronic annotation /// 0061309 // cardiac neural crest cell development involved in outflow tract morphogenesis // inferred from electronic annotation /// 0072012 // glomerulus vasculature development // inferred from electronic annotation /// 0072049 // comma-shaped body morphogenesis // inferred from electronic annotation /// 0072050 // S-shaped body morphogenesis // inferred from electronic annotation /// 0072141 // renal interstitial cell development // inferred from electronic annotation /// 0072282 // metanephric nephron tubule morphogenesis // inferred from electronic annotation /// 0090102 // cochlea development // inferred from electronic annotation /// 0097084 // vascular smooth muscle cell development // inferred from sequence or structural similarity /// 0097084 // vascular smooth muscle cell development // inferred from electronic annotation /// 0097150 // neuronal stem cell maintenance // inferred from expression pattern /// 0097150 // neuronal stem cell maintenance // inferred from electronic annotation /// 2000227 // negative regulation of pancreatic A cell differentiation // inferred from electronic annotation /// 2000737 // negative regulation of stem cell differentiation // inferred from mutant phenotype /// 2000974 // negative regulation of pro-B cell differentiation // inferred from mutant phenotype /// 2000978 // negative regulation of forebrain neuron differentiation // inferred from sequence or structural similarity /// 2000981 // negative regulation of inner ear receptor cell differentiation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0000981 // sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from electronic annotation /// 0001078 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription // inferred from sequence or structural similarity /// 0001078 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // non-traceable author statement /// 0042803 // protein homodimerization activity // inferred from sequence or structural similarity /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0042826 // histone deacetylase binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from sequence or structural similarity /// 0071820 // N-box binding // inferred from sequence or structural similarity /// 0071820 // N-box binding // inferred from electronic annotation","chr3:193853930-193856396 (+) // 91.83 // q29"]
["11734790_at",-0.24477339,-0.01954937,0.019549847,0.14237261,-0.021834373,0.13338614,0.5488407,0.16544667,-1.1221243,-0.16623251,1.1221243,"down","SRR",63826.0,"0006520 // cellular amino acid metabolic process // inferred from electronic annotation /// 0006563 // L-serine metabolic process // inferred from direct assay /// 0006563 // L-serine metabolic process // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009069 // serine family amino acid metabolic process // inferred from sequence or structural similarity /// 0009069 // serine family amino acid metabolic process // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from expression pattern /// 0042493 // response to drug // inferred from electronic annotation /// 0042866 // pyruvate biosynthetic process // inferred from direct assay /// 0043278 // response to morphine // inferred from electronic annotation /// 0051289 // protein homotetramerization // inferred from electronic annotation /// 0051289 // protein homotetramerization // inferred from sequence or structural similarity /// 0070178 // D-serine metabolic process // inferred from direct assay /// 0070178 // D-serine metabolic process // inferred from electronic annotation /// 0070179 // D-serine biosynthetic process // inferred from direct assay /// 0070179 // D-serine biosynthetic process // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from direct assay /// 0045177 // apical part of cell // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from direct assay /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0003941 // L-serine ammonia-lyase activity // inferred from direct assay /// 0003941 // L-serine ammonia-lyase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from sequence or structural similarity /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from sequence or structural similarity /// 0008721 // D-serine ammonia-lyase activity // inferred from electronic annotation /// 0016594 // glycine binding // inferred from electronic annotation /// 0016594 // glycine binding // inferred from sequence or structural similarity /// 0016829 // lyase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation /// 0018114 // threonine racemase activity // inferred from electronic annotation /// 0018114 // threonine racemase activity // inferred from sequence or structural similarity /// 0030165 // PDZ domain binding // inferred from physical interaction /// 0030170 // pyridoxal phosphate binding // inferred from direct assay /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from sequence or structural similarity /// 0030378 // serine racemase activity // inferred from direct assay /// 0030378 // serine racemase activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:2206959-2228553 (+) // 89.66 // p13.3"]
["11742967_a_at",-0.07233906,-0.04061842,0.04061842,0.12791729,-0.04347992,0.19183779,0.59606683,0.20999649,-1.0838798,-0.11620481,1.0838798,"down","MTERFD2",130916.0,"0006390 // transcription from mitochondrial promoter // inferred from electronic annotation /// 0006626 // protein targeting to mitochondrion // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0042255 // ribosome assembly // inferred from electronic annotation /// 0043010 // camera-type eye development // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005762 // mitochondrial large ribosomal subunit // inferred from direct assay","0019843 // rRNA binding // inferred from direct assay","chr2:242026510-242041714 (-) // 87.6 // q37.3"]
["11751461_a_at",-0.051412106,0.1945455,-0.1402793,0.17932296,0.051411867,-0.20970678,0.99112535,0.97013706,-1.0042078,-0.006057907,1.0042078,"down","C11orf65",160140.0,"","","","chr11:108179245-108338258 (-) // 100.0 // q22.3"]
["11730168_s_at",-0.04232788,-0.01666832,0.0034160614,-0.0034160614,0.042251587,0.0058717728,0.5407823,0.1569741,-1.0234419,-0.03342922,1.0234419,"down",0.0034160614,"LITAF",9516.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007165 // signal transduction // inferred from mutant phenotype /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from mutant phenotype","0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from mutant phenotype /// 0050699 // WW domain binding // inferred from physical interaction"]
["11728135_at",0.21400833,-0.0700326,0.060786724,0.08143234,-0.060786724,-0.089468956,0.7415917,0.4030839,1.0652524,0.09119533,1.0652524,"up","NIPAL4",348938.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0015693 // magnesium ion transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation","chr5:156887026-156901729 (+) // 98.76 // q33.3"]
["11759292_at",0.07411718,-0.07709074,-0.01469326,-0.10388374,0.19394207,0.01469326,0.8894896,0.6957503,-1.0286884,-0.040806085,1.0286884,"down","FAM63A",55793.0,"","","","chr1:150965685-150980225 (-) // 78.72 // q21.3"]
["11762134_at",0.14192152,-0.11301947,-0.11606169,0.11301947,-0.13843298,0.4355216,0.7561766,0.42506856,-1.1217537,-0.16575593,1.1217537,"down","ZNF76",7629.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006359 // regulation of transcription from RNA polymerase III promoter // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:35226685-35256092 (+) // 93.64 // p21.31"]
["11732848_a_at",-0.14223385,0.19545221,-0.027522564,0.15180826,-0.14929533,0.027522564,0.99736744,0.9917896,-1.0010031,-0.0014465086,1.0010031,"down","PRELID2",153768.0,"","0005739 // mitochondrion // inferred from electronic annotation","","chr5:145137894-145214899 (-) // 70.42 // q32"]
["11763606_a_at",0.05896187,-0.119365215,-0.04323578,0.4373827,0.04323578,-0.07617426,0.7130669,0.3588793,-1.1245604,-0.16936108,1.1245604,"down","VAV1",7409.0,"0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006909 // phagocytosis // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006955 // immune response // inferred from electronic annotation /// 0007229 // integrin-mediated signaling pathway // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0031295 // T cell costimulation // traceable author statement /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0042110 // T cell activation // inferred from electronic annotation /// 0043087 // regulation of GTPase activity // inferred from electronic annotation /// 0045785 // positive regulation of cell adhesion // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement","0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005085 // guanyl-nucleotide exchange factor activity // traceable author statement /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0030676 // Rac guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:6826689-6854111 (+) // 98.27 // p13.3"]
["11720257_a_at",-0.05761814,0.004488468,-0.004488468,-0.03288746,0.010509968,0.043547153,0.7541397,0.4224526,-1.0183705,-0.026262546,1.0183705,"down","TRAPPC6B",122553.0,"0006810 // transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation","","chr14:39617014-39640038 (-) // 67.79 // q21.1"]
["11744010_x_at",0.117530346,-0.008821011,-0.065993786,0.20256615,-0.038876057,0.008821011,0.87550586,0.66129994,-1.0304433,-0.043265138,1.0304433,"down","TMEM175",84286.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr4:926174-952444 (+) // 97.13 // p16.3"]
["11729079_s_at",0.08995724,-0.05384612,-0.16012502,0.02617979,0.008726597,-0.008726597,0.8145376,0.5313664,-1.0353112,-0.050064515,1.0353112,"down","ESRRG",2104.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0043401 // steroid hormone mediated signaling pathway // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0048384 // retinoic acid receptor signaling pathway // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003707 // steroid hormone receptor activity // inferred from electronic annotation /// 0003708 // retinoic acid receptor activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005496 // steroid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050682 // AF-2 domain binding // inferred from sequence or structural similarity","chr1:216676587-217262976 (-) // 94.01 // q41"]
["11720254_a_at",0.041856766,0.05527544,-0.09601116,0.028941631,-0.049720287,-0.028941631,0.9213586,0.76839155,1.0118161,0.016947163,1.0118161,"up","CNNM4",26504.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0007601 // visual perception // inferred from electronic annotation /// 0031214 // biomineral tissue development // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr2:97426638-97477611 (+) // 94.71 // q11.2"]
["11721834_a_at",-0.07596302,-0.013092041,-0.08992958,0.013092041,0.05532646,0.04258728,0.26811832,0.022450397,-1.0692977,-0.09666353,1.0692977,"down","GET4 /// SUN1","23353 /// 51608","0006810 // transport // inferred from electronic annotation /// 0006998 // nuclear envelope organization // inferred from genetic interaction /// 0006998 // nuclear envelope organization // inferred from electronic annotation /// 0071816 // tail-anchored membrane protein insertion into ER membrane // inferred from mutant phenotype /// 0090286 // cytoskeletal anchoring at nuclear membrane // inferred from direct assay /// 0090292 // nuclear matrix anchoring at nuclear membrane // inferred from direct assay","0002080 // acrosomal membrane // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from direct assay /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005637 // nuclear inner membrane // inferred from electronic annotation /// 0005639 // integral to nuclear inner membrane // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from direct assay /// 0034993 // SUN-KASH complex // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0071818 // BAT3 complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0005521 // lamin binding // inferred from electronic annotation","chr7:916185-936071 (+) // 90.3 // p22.3"]
["11742731_at",-0.032503128,0.10698509,0.0725956,0.027378082,-0.027378082,-0.042883873,0.6310279,0.24965273,1.0448679,0.06332052,1.0448679,"up","SURF6",6838.0,"0042254 // ribosome biogenesis // inferred from electronic annotation","0001652 // granular component // inferred from sequence or structural similarity /// 0001652 // granular component // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // traceable author statement /// 0005730 // nucleolus // inferred from electronic annotation /// 0044451 // nucleoplasm part // inferred from electronic annotation","0003677 // DNA binding // inferred from sequence or structural similarity /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from sequence or structural similarity /// 0003723 // RNA binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement","chr9:136196985-136203222 (-) // 93.3 // q34.2"]
["11718393_s_at",0.016052246,-0.0031051636,0.08924103,-0.115857124,0.0031051636,-0.06731796,0.46192747,0.10224939,1.067389,0.094086066,1.067389,"up","PREPL",9581.0,"0006508 // proteolysis // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation","0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr2:44545902-44588010 (-) // 83.12 // p21"]
["11722510_at",-0.010277748,-0.011106491,-0.006468773,0.023036957,0.027061462,0.006468773,0.21328753,0.0121076675,-1.0196967,-0.028140116,1.0196967,"down","CRTC3",64784.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0032793 // positive regulation of CREB transcription factor activity // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0051289 // protein homotetramerization // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0008140 // cAMP response element binding protein binding // inferred from electronic annotation","chr15:91073156-91188577 (+) // 95.0 // q26.1"]
["11742801_a_at",0.013593197,0.08051729,-0.01359272,-0.09385729,-0.06445551,0.06143999,0.7035694,0.34464148,1.0418375,0.059130207,1.0418375,"up","MAP2K3",5606.0,"0000165 // MAPK cascade // inferred from electronic annotation /// 0000187 // activation of MAPK activity // traceable author statement /// 0000187 // activation of MAPK activity // inferred from electronic annotation /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0008063 // Toll signaling pathway // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0042035 // regulation of cytokine biosynthetic process // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045860 // positive regulation of protein kinase activity // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0060048 // cardiac muscle contraction // inferred from electronic annotation","0005654 // nucleoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004708 // MAP kinase kinase activity // inferred from electronic annotation /// 0004708 // MAP kinase kinase activity // traceable author statement /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from electronic annotation","chr17:21187957-21218552 (+) // 93.66 // p11.2"]
["11757854_s_at",-0.09737301,-0.0848155,-0.138062,0.13965034,0.08481598,0.08632517,0.088496126,9.573882E-4,-1.1569667,-0.21034732,1.1569667,"down","PLEKHA5",54477.0,"","","0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0005545 // 1-phosphatidylinositol binding // non-traceable author statement","chr12:19528638-19529334 (+) // 92.82 // p12.3"]
["11741257_x_at",0.11373377,-0.19637442,0.0,0.0,0.025486946,-0.0874753,0.98435295,0.9467285,-1.0047832,-0.006884181,1.0047832,"down","APOBEC3F",200316.0,"0002230 // positive regulation of defense response to virus by host // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation /// 0009615 // response to virus // inferred from electronic annotation /// 0009972 // cytidine deamination // inferred from direct assay /// 0010529 // negative regulation of transposition // inferred from direct assay /// 0016553 // base conversion or substitution editing // inferred from direct assay /// 0045071 // negative regulation of viral genome replication // inferred from direct assay /// 0045087 // innate immune response // inferred from direct assay /// 0045869 // negative regulation of retroviral genome replication // inferred from direct assay /// 0048525 // negative regulation of viral reproduction // inferred from direct assay /// 0080111 // DNA demethylation // inferred from direct assay","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0030895 // apolipoprotein B mRNA editing enzyme complex // traceable author statement","0003723 // RNA binding // inferred from direct assay /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004126 // cytidine deaminase activity // inferred from direct assay /// 0008270 // zinc ion binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016814 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr22:39436672-39451973 (+) // 43.37 // q13.1"]
["11746431_a_at",-0.05612755,0.076961994,0.096345425,-0.032399178,0.032399178,-0.076230526,0.68843853,0.32404226,1.0457008,0.064470105,1.0457008,"up","FBXO11",80204.0,"0006464 // cellular protein modification process // inferred from direct assay /// 0006511 // ubiquitin-dependent protein catabolic process // non-traceable author statement /// 0007605 // sensory perception of sound // inferred from electronic annotation /// 0016567 // protein ubiquitination // non-traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0035246 // peptidyl-arginine N-methylation // inferred from direct assay","0000151 // ubiquitin ligase complex // non-traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","0004842 // ubiquitin-protein ligase activity // non-traceable author statement /// 0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016274 // protein-arginine N-methyltransferase activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:48034775-48132932 (-) // 92.73 // p16.3"]
["11750480_a_at",0.01756668,0.1390047,-0.017567158,-0.07054043,-0.042241573,0.03610325,0.65192354,0.27688438,1.051096,0.07189439,1.051096,"up","ATF2",1386.0,"0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0003151 // outflow tract morphogenesis // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred by curator /// 0006366 // transcription from RNA polymerase II promoter // inferred by curator /// 0006970 // response to osmotic stress // inferred from direct assay /// 0008063 // Toll signaling pathway // traceable author statement /// 0032915 // positive regulation of transforming growth factor beta2 production // inferred from electronic annotation /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045444 // fat cell differentiation // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // traceable author statement /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0060612 // adipose tissue development // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay","0000980 // RNA polymerase II distal enhancer sequence-specific DNA binding // inferred from direct assay /// 0001076 // RNA polymerase II transcription factor binding transcription factor activity // inferred by curator /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from electronic annotation /// 0001102 // RNA polymerase II activating transcription factor binding // inferred from physical interaction /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred by curator /// 0003713 // transcription coactivator activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008140 // cAMP response element binding protein binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0035497 // cAMP response element binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation","chr2:175978970-176032897 (-) // 94.46 // q31.1"]
["11720501_a_at",0.09444332,0.078988075,0.14694023,-0.078988075,-0.16314697,-0.08771896,0.12898104,0.0030107326,1.1621062,0.21674186,1.1621062,"up","UBE4B",10277.0,"0000209 // protein polyubiquitination // inferred from electronic annotation /// 0003222 // ventricular trabecula myocardium morphogenesis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from direct assay /// 0009411 // response to UV // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from electronic annotation /// 0034976 // response to endoplasmic reticulum stress // inferred from electronic annotation /// 0042787 // protein ubiquitination involved in ubiquitin-dependent protein catabolic process // traceable author statement /// 0044257 // cellular protein catabolic process // inferred from electronic annotation","0000151 // ubiquitin ligase complex // traceable author statement /// 0000151 // ubiquitin ligase complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation","0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from sequence or structural similarity /// 0019899 // enzyme binding // inferred from electronic annotation /// 0034450 // ubiquitin-ubiquitin ligase activity // inferred from electronic annotation","chr1:10093010-10241297 (+) // 99.01 // p36.22"]
["11739795_a_at",-0.05039549,0.07213831,0.008625507,-0.12862444,-0.0086250305,0.050653934,0.8347612,0.5724421,1.0273929,0.038987957,1.0273929,"up","RHBDF2",79651.0,"0006508 // proteolysis // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0050709 // negative regulation of protein secretion // inferred from sequence or structural similarity /// 0050709 // negative regulation of protein secretion // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from sequence or structural similarity /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0019838 // growth factor binding // inferred from electronic annotation","chr17:74466975-74497872 (-) // 99.55 // q25.1"]
["11742664_x_at",0.0032775402,-0.13471675,0.08555412,-0.043538094,-0.0032777786,0.029764652,0.96552724,0.8939158,-1.0066843,-0.009611324,1.0066843,"down","","","","","","chr7:28318841-28319318 (-) // 100.0 // p15.1"]
["11731638_a_at",0.16059256,-0.123048306,0.013096809,0.13357115,-0.013096809,-0.049078465,0.9847724,0.94771475,-1.0048069,-0.006918242,1.0048069,"down","GAB1",2549.0,"0000187 // activation of MAPK activity // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // inferred from electronic annotation /// 0007257 // activation of JUN kinase activity // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0008544 // epidermis development // inferred from electronic annotation /// 0030334 // regulation of cell migration // inferred from electronic annotation /// 0043410 // positive regulation of MAPK cascade // inferred from electronic annotation /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from electronic annotation /// 0060711 // labyrinthine layer development // inferred from electronic annotation /// 0070102 // interleukin-6-mediated signaling pathway // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0004871 // signal transducer activity // inferred from electronic annotation /// 0005070 // SH3/SH2 adaptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation","chr4:144257557-144395718 (+) // 96.62 // q31.21"]
["11758163_s_at",-0.006055832,0.006055832,0.11292076,-0.02301979,0.010433197,-0.055425644,0.6128595,0.22719842,1.0426905,0.06031101,1.0426905,"up","ZFP62",643836.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr5:180274614-180276504 (-) // 99.63 // q35.3"]
["11759983_at",-0.035839558,-0.14358377,0.071950436,-0.050893307,0.035839558,0.07671213,0.78900814,0.4814034,-1.0398512,-0.05637708,1.0398512,"down","VTI1A",143187.0,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006888 // ER to Golgi vesicle-mediated transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0042147 // retrograde transport, endosome to Golgi // inferred from direct assay /// 0042147 // retrograde transport, endosome to Golgi // inferred from mutant phenotype /// 0048280 // vesicle fusion with Golgi apparatus // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0030136 // clathrin-coated vesicle // inferred from electronic annotation /// 0031201 // SNARE complex // traceable author statement /// 0031201 // SNARE complex // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation","0005484 // SNAP receptor activity // inferred from direct assay","chr10:114207015-114497532 (+) // 60.61 // q25.2"]
["11753948_a_at",0.019761086,-0.019761562,0.061191082,-0.067242146,0.10885048,-0.060075283,0.88794404,0.6909982,1.0185752,0.026552483,1.0185752,"up","FBXW8",26259.0,"0060712 // spongiotrophoblast layer development // inferred from electronic annotation /// 0060716 // labyrinthine layer blood vessel development // inferred from electronic annotation","0019005 // SCF ubiquitin ligase complex // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr12:117348769-117470625 (+) // 82.45 // q24.22"]
["11763598_a_at",0.0048270226,-0.17777109,-0.037721395,0.07102823,0.27922583,-0.004827261,0.51999587,0.14112367,-1.1371039,-0.1853641,1.1371039,"down","","","","","","chr8:10983979-10987745 (-) // 61.36 // p23.1"]
["11750772_a_at",-0.015557051,0.028262615,0.0044026375,-0.15685105,0.184659,-0.0044026375,0.99507654,0.9841927,-1.001456,-0.0020990684,1.001456,"down","PDGFRA",5156.0,"0001553 // luteinization // inferred from sequence or structural similarity /// 0001553 // luteinization // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001775 // cell activation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006935 // chemotaxis // inferred from electronic annotation /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0007204 // elevation of cytosolic calcium ion concentration // inferred from mutant phenotype /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008210 // estrogen metabolic process // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008585 // female gonad development // inferred from electronic annotation /// 0009653 // anatomical structure morphogenesis // inferred from electronic annotation /// 0009725 // response to hormone stimulus // inferred from electronic annotation /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0010035 // response to inorganic substance // inferred from electronic annotation /// 0010544 // negative regulation of platelet activation // inferred from direct assay /// 0010863 // positive regulation of phospholipase C activity // inferred from mutant phenotype /// 0014068 // positive regulation of phosphatidylinositol 3-kinase cascade // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016477 // cell migration // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0023019 // signal transduction involved in regulation of gene expression // inferred from electronic annotation /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0030325 // adrenal gland development // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0030335 // positive regulation of cell migration // inferred from mutant phenotype /// 0030539 // male genitalia development // inferred from electronic annotation /// 0032355 // response to estradiol stimulus // inferred from electronic annotation /// 0033327 // Leydig cell differentiation // inferred from electronic annotation /// 0034097 // response to cytokine stimulus // inferred from electronic annotation /// 0035790 // platelet-derived growth factor receptor-alpha signaling pathway // inferred from direct assay /// 0035790 // platelet-derived growth factor receptor-alpha signaling pathway // inferred from mutant phenotype /// 0035790 // platelet-derived growth factor receptor-alpha signaling pathway // inferred from electronic annotation /// 0038084 // vascular endothelial growth factor signaling pathway // inferred from electronic annotation /// 0038091 // positive regulation of cell proliferation by VEGF-activated platelet derived growth factor receptor signaling pathway // inferred from direct assay /// 0042060 // wound healing // inferred from sequence or structural similarity /// 0042060 // wound healing // inferred from electronic annotation /// 0042063 // gliogenesis // inferred from electronic annotation /// 0042475 // odontogenesis of dentin-containing tooth // inferred from electronic annotation /// 0043552 // positive regulation of phosphatidylinositol 3-kinase activity // inferred from mutant phenotype /// 0043627 // response to estrogen stimulus // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045740 // positive regulation of DNA replication // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from electronic annotation /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from direct assay /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from electronic annotation /// 0048010 // vascular endothelial growth factor receptor signaling pathway // inferred from electronic annotation /// 0048015 // phosphatidylinositol-mediated signaling // inferred from mutant phenotype /// 0048146 // positive regulation of fibroblast proliferation // inferred from direct assay /// 0048557 // embryonic digestive tract morphogenesis // inferred from sequence or structural similarity /// 0048557 // embryonic digestive tract morphogenesis // inferred from electronic annotation /// 0048701 // embryonic cranial skeleton morphogenesis // inferred from sequence or structural similarity /// 0048701 // embryonic cranial skeleton morphogenesis // inferred from electronic annotation /// 0048704 // embryonic skeletal system morphogenesis // inferred from sequence or structural similarity /// 0048705 // skeletal system morphogenesis // inferred from electronic annotation /// 0048839 // inner ear development // inferred from electronic annotation /// 0050920 // regulation of chemotaxis // inferred from mutant phenotype /// 0055003 // cardiac myofibril assembly // inferred from sequence or structural similarity /// 0055003 // cardiac myofibril assembly // inferred from electronic annotation /// 0055093 // response to hyperoxia // inferred from electronic annotation /// 0060021 // palate development // inferred from electronic annotation /// 0060325 // face morphogenesis // inferred from electronic annotation /// 0060326 // cell chemotaxis // inferred from mutant phenotype /// 0060326 // cell chemotaxis // inferred from electronic annotation /// 0061298 // retina vasculature development in camera-type eye // inferred from sequence or structural similarity /// 0061298 // retina vasculature development in camera-type eye // inferred from electronic annotation /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from mutant phenotype /// 0070527 // platelet aggregation // inferred from mutant phenotype /// 0071230 // cellular response to amino acid stimulus // inferred from electronic annotation /// 0072277 // metanephric glomerular capillary formation // inferred from sequence or structural similarity /// 0072277 // metanephric glomerular capillary formation // inferred from electronic annotation /// 2000249 // regulation of actin cytoskeleton reorganization // traceable author statement /// 2000739 // regulation of mesenchymal stem cell differentiation // inferred from mutant phenotype","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031226 // intrinsic to plasma membrane // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from direct assay /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005018 // platelet-derived growth factor alpha-receptor activity // inferred from direct assay /// 0005018 // platelet-derived growth factor alpha-receptor activity // inferred from mutant phenotype /// 0005018 // platelet-derived growth factor alpha-receptor activity // inferred from electronic annotation /// 0005021 // vascular endothelial growth factor-activated receptor activity // inferred from direct assay /// 0005021 // vascular endothelial growth factor-activated receptor activity // inferred from electronic annotation /// 0005161 // platelet-derived growth factor receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0038085 // vascular endothelial growth factor binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0043548 // phosphatidylinositol 3-kinase binding // inferred from electronic annotation /// 0048407 // platelet-derived growth factor binding // inferred from direct assay /// 0048407 // platelet-derived growth factor binding // inferred from physical interaction /// 0048407 // platelet-derived growth factor binding // inferred from electronic annotation","chr4:55095446-55131514 (+) // 90.11 // q12"]
["11715767_s_at",0.01776123,-0.028058052,0.0037794113,0.048225403,-0.0037794113,-0.034810066,0.95228326,0.85565436,-1.0037392,-0.005384519,1.0037392,"down","ACAA2",10449.0,"0006084 // acetyl-CoA metabolic process // inferred from electronic annotation /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006635 // fatty acid beta-oxidation // inferred from electronic annotation /// 0006695 // cholesterol biosynthetic process // non-traceable author statement /// 0006916 // anti-apoptosis // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // non-traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0003988 // acetyl-CoA C-acyltransferase activity // non-traceable author statement /// 0003988 // acetyl-CoA C-acyltransferase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0016747 // transferase activity, transferring acyl groups other than amino-acyl groups // inferred from electronic annotation","chr18:47309728-47340330 (-) // 93.3 // q21.1"]
["11742445_at",0.017450571,-0.017450571,-0.05253458,0.04780388,0.10026646,-0.04817629,0.70676965,0.34885302,-1.035846,-0.050809525,1.035846,"down","","","0007155 // cell adhesion // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr16:819427-832926 (-) // 100.0 // p13.3"]
["11736878_a_at",0.078914165,-2.2172928E-4,0.2535081,-0.07601547,-0.16010976,2.2172928E-4,0.45490855,0.09804494,1.1402642,0.18936807,1.1402642,"up","GPLD1",2822.0,"0001503 // ossification // inferred from sequence or structural similarity /// 0002042 // cell migration involved in sprouting angiogenesis // inferred from mutant phenotype /// 0002062 // chondrocyte differentiation // inferred from sequence or structural similarity /// 0002430 // complement receptor mediated signaling pathway // inferred from direct assay /// 0006507 // GPI anchor release // inferred from direct assay /// 0006507 // GPI anchor release // inferred from mutant phenotype /// 0006507 // GPI anchor release // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0008286 // insulin receptor signaling pathway // inferred from direct assay /// 0009749 // response to glucose stimulus // inferred from direct assay /// 0010595 // positive regulation of endothelial cell migration // inferred from mutant phenotype /// 0010694 // positive regulation of alkaline phosphatase activity // inferred from sequence or structural similarity /// 0010867 // positive regulation of triglyceride biosynthetic process // inferred from sequence or structural similarity /// 0010897 // negative regulation of triglyceride catabolic process // inferred from sequence or structural similarity /// 0010907 // positive regulation of glucose metabolic process // inferred from sequence or structural similarity /// 0010983 // positive regulation of high-density lipoprotein particle clearance // inferred from sequence or structural similarity /// 0032869 // cellular response to insulin stimulus // inferred from direct assay /// 0035690 // cellular response to drug // inferred from direct assay /// 0035701 // hematopoietic stem cell migration // traceable author statement /// 0035774 // positive regulation of insulin secretion involved in cellular response to glucose stimulus // inferred from sequence or structural similarity /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0045919 // positive regulation of cytolysis // inferred from direct assay /// 0046470 // phosphatidylcholine metabolic process // inferred from sequence or structural similarity /// 0046470 // phosphatidylcholine metabolic process // traceable author statement /// 0051044 // positive regulation of membrane protein ectodomain proteolysis // inferred from direct assay /// 0051047 // positive regulation of secretion // inferred from sequence or structural similarity /// 0070633 // transepithelial transport // inferred from sequence or structural similarity /// 0071277 // cellular response to calcium ion // inferred from direct assay /// 0071397 // cellular response to cholesterol // inferred from mutant phenotype /// 0071401 // cellular response to triglyceride // inferred from mutant phenotype /// 0071467 // cellular response to pH // inferred from direct assay /// 0097241 // hematopoietic stem cell migration to bone marrow // traceable author statement /// 1900076 // regulation of cellular response to insulin stimulus // inferred from direct assay","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from sequence or structural similarity /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005622 // intracellular // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005792 // microsome // inferred from direct assay /// 0044444 // cytoplasmic part // inferred from direct assay","0004621 // glycosylphosphatidylinositol phospholipase D activity // inferred from direct assay /// 0004621 // glycosylphosphatidylinositol phospholipase D activity // traceable author statement /// 0004621 // glycosylphosphatidylinositol phospholipase D activity // inferred from electronic annotation /// 0004630 // phospholipase D activity // inferred from direct assay /// 0004630 // phospholipase D activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016788 // hydrolase activity, acting on ester bonds // inferred from electronic annotation /// 0017080 // sodium channel regulator activity // inferred from sequence or structural similarity","chr6:24428404-24489850 (-) // 90.09 // p22.3"]
["11742633_at",0.0,0.07992029,0.0,-0.13779354,-0.0012931824,0.007930279,0.6416897,0.26345718,1.0499779,0.07035896,1.0499779,"up","OR4K13",390433.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr14:20502002-20502917 (-) // 100.0 // q11.2"]
["11749343_a_at",0.0,0.09673977,0.0,-0.04415989,0.059327602,-0.08685017,0.7125305,0.35774383,1.0396808,0.056140717,1.0396808,"up","ABHD4",63874.0,"0016042 // lipid catabolic process // inferred from electronic annotation","","0016787 // hydrolase activity // inferred from electronic annotation","chr14:23067206-23073161 (+) // 93.19 // q11.2"]
["11726411_a_at",0.027059555,0.14372492,-0.027059555,-0.037736893,0.07534933,-0.03501749,0.7948288,0.4945742,1.0331454,0.047043346,1.0331454,"up","ZBTB7C",201501.0,"","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr18:45553257-45691937 (-) // 93.97 // q21.1"]
["11740863_at",-0.014149666,0.15542126,-0.08472419,0.014149666,0.13287115,-0.023260593,0.9355958,0.806012,-1.0156506,-0.02240422,1.0156506,"down","TPH1",7166.0,"0006950 // response to stress // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009072 // aromatic amino acid family metabolic process // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042427 // serotonin biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046219 // indolalkylamine biosynthetic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0060749 // mammary gland alveolus development // inferred from electronic annotation","0005829 // cytosol // traceable author statement /// 0043005 // neuron projection // inferred from electronic annotation","0004497 // monooxygenase activity // inferred from electronic annotation /// 0004510 // tryptophan 5-monooxygenase activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016597 // amino acid binding // inferred from electronic annotation /// 0016714 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced pteridine as one donor, and incorporation of one atom of oxygen // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:18041956-18063975 (-) // 99.5 // p15.1"]
["11752755_a_at",-0.019371986,0.005589962,0.11203003,-0.005589962,0.13552713,-0.15794516,0.88241947,0.676995,1.029601,0.042085327,1.029601,"up","MTRF1",9617.0,"0006412 // translation // inferred from electronic annotation /// 0006415 // translational termination // inferred from electronic annotation /// 0006449 // regulation of translational termination // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005739 // mitochondrion // traceable author statement","0003747 // translation release factor activity // traceable author statement /// 0003747 // translation release factor activity // inferred from electronic annotation /// 0016149 // translation release factor activity, codon specific // inferred from electronic annotation","chr13:41826418-41837705 (-) // 72.7 // q14.11"]
["11728124_a_at",-0.019900322,-0.047377586,0.09841013,0.06736231,-0.26699734,0.019899845,0.8333334,0.5696427,1.0499271,0.07028918,1.0499271,"up","C16orf79",283870.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr16:2259253-2261317 (-) // 87.37 // p13.3"]
["11738984_x_at",-0.005750656,-0.0640831,0.005750656,0.026432037,0.08989143,-0.046399117,0.7237888,0.37629202,-1.0314466,-0.0446691,1.0314466,"down","MAP1LC3B",81631.0,"0006914 // autophagy // inferred from electronic annotation","0000421 // autophagic vacuole membrane // inferred from electronic annotation /// 0005622 // intracellular // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005776 // autophagic vacuole // inferred from sequence or structural similarity /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031090 // organelle membrane // inferred from sequence or structural similarity /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr16:87425405-87438380 (+) // 86.34 // q24.2"]
["11757900_a_at",-0.21063232,-0.31124544,-0.20716095,0.27769518,0.20716143,0.26559734,0.0634374,2.6071045E-4,-1.4075285,-0.49316415,1.4075285,"down","SEBOX /// VTN","645832 /// 7448","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006955 // immune response // inferred from electronic annotation /// 0006955 // immune response // traceable author statement /// 0007155 // cell adhesion // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007160 // cell-matrix adhesion // inferred from direct assay /// 0007160 // cell-matrix adhesion // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0010811 // positive regulation of cell-substrate adhesion // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // inferred from direct assay /// 0014911 // positive regulation of smooth muscle cell migration // inferred from direct assay /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030195 // negative regulation of blood coagulation // inferred by curator /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0030949 // positive regulation of vascular endothelial growth factor receptor signaling pathway // traceable author statement /// 0032092 // positive regulation of protein binding // inferred from direct assay /// 0033627 // cell adhesion mediated by integrin // inferred from direct assay /// 0048260 // positive regulation of receptor-mediated endocytosis // inferred from direct assay /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0061302 // smooth muscle cell-matrix adhesion // inferred from direct assay /// 0090303 // positive regulation of wound healing // inferred by curator","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from sequence or structural similarity /// 0071062 // alphav-beta3 integrin-vitronectin complex // traceable author statement","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005044 // scavenger receptor activity // inferred from electronic annotation /// 0005178 // integrin binding // inferred from physical interaction /// 0008201 // heparin binding // inferred from electronic annotation /// 0030247 // polysaccharide binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050840 // extracellular matrix binding // inferred from electronic annotation","chr17:26694305-26694974 (-) // 96.45 // q11.2"]
["11722691_at",-0.07834625,-0.0034828186,0.009283543,0.0034828186,-0.08105135,0.04129982,0.9343391,0.8028563,-1.0084169,-0.012092189,1.0084169,"down","AVEN",57099.0,"0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from direct assay","0005622 // intracellular // inferred from direct assay /// 0005624 // membrane fraction // inferred from direct assay /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr15:34158194-34331406 (-) // 97.65 // q14"]
["11758372_s_at",0.08202076,0.006304741,0.02027607,-0.016202927,-0.008856773,-0.006304741,0.4875555,0.11751869,1.0328676,0.046655264,1.0328676,"up","EI24",9538.0,"0006914 // autophagy // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0006917 // induction of apoptosis // traceable author statement /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0042493 // response to drug // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation","","chr11:125452238-125454066 (+) // 92.82 // q24.2"]
["11724590_a_at",-0.023541927,0.019685268,0.12644577,-0.14425564,0.14631653,-0.019685268,0.8697014,0.6493136,1.0329267,0.04673785,1.0329267,"up","TCP10L",140290.0,"","0005634 // nucleus // inferred from electronic annotation","","chr21:33947151-33957837 (-) // 98.24 // q22.11"]
["11751673_a_at",-0.014034748,-0.012112141,-0.038691044,0.029456615,0.080463886,0.012112141,0.35756415,0.04868866,-1.044122,-0.062290266,1.044122,"down","ZMIZ2",83637.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0043596 // nuclear replication fork // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0030374 // ligand-dependent nuclear receptor transcription coactivator activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:44804012-44807583 (+) // 99.7 // p13"]
["11754663_s_at",-0.014418602,0.014418602,-0.049568176,0.12753582,-0.08820534,0.08644009,0.76562035,0.44269425,-1.0413437,-0.0584463,1.0413437,"down","COPS7A",50813.0,"0010388 // cullin deneddylation // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0008180 // signalosome // inferred from direct assay /// 0008180 // signalosome // inferred from electronic annotation","","chr12:6833202-6841030 (+) // 99.3 // p13.31"]
["11719124_at",-0.15987968,-0.07699728,0.20261955,0.07699728,-0.18808317,0.2876482,0.8962971,0.71005166,-1.0499156,-0.070273295,1.0499156,"down","TIMELESS",8914.0,"0002009 // morphogenesis of an epithelium // inferred from sequence or structural similarity /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007623 // circadian rhythm // inferred from sequence or structural similarity /// 0007623 // circadian rhythm // traceable author statement /// 0009582 // detection of abiotic stimulus // traceable author statement /// 0009628 // response to abiotic stimulus // traceable author statement /// 0033261 // regulation of S phase // inferred from mutant phenotype /// 0042127 // regulation of cell proliferation // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0048511 // rhythmic process // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0000790 // nuclear chromatin // inferred from direct assay /// 0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr12:56810157-56843191 (-) // 91.81 // q13.3"]
["11744454_a_at",0.004691124,-0.02652359,0.04016018,-0.07209396,-0.004691124,0.040640354,0.87381464,0.6576779,1.0126654,0.018157551,1.0126654,"up","PARD3",56288.0,"0006461 // protein complex assembly // traceable author statement /// 0006612 // protein targeting to membrane // inferred from sequence or structural similarity /// 0007049 // cell cycle // inferred from electronic annotation /// 0007163 // establishment or maintenance of cell polarity // traceable author statement /// 0007205 // protein kinase C-activating G-protein coupled receptor signaling pathway // traceable author statement /// 0007409 // axonogenesis // traceable author statement /// 0008356 // asymmetric cell division // traceable author statement /// 0034329 // cell junction assembly // traceable author statement /// 0045216 // cell-cell junction organization // traceable author statement /// 0051301 // cell division // inferred from electronic annotation /// 0070830 // tight junction assembly // inferred from sequence or structural similarity /// 0070830 // tight junction assembly // traceable author statement /// 0090162 // establishment of epithelial cell polarity // inferred from sequence or structural similarity","0005737 // cytoplasm // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from direct assay /// 0005911 // cell-cell junction // inferred from sequence or structural similarity /// 0005911 // cell-cell junction // inferred from electronic annotation /// 0005912 // adherens junction // inferred from electronic annotation /// 0005913 // cell-cell adherens junction // inferred from electronic annotation /// 0005923 // tight junction // inferred from direct assay /// 0005923 // tight junction // inferred from sequence or structural similarity /// 0005923 // tight junction // inferred from electronic annotation /// 0005923 // tight junction // traceable author statement /// 0005938 // cell cortex // inferred from electronic annotation /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from electronic annotation","0005080 // protein kinase C binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005546 // phosphatidylinositol-4,5-bisphosphate binding // inferred from sequence or structural similarity /// 0005547 // phosphatidylinositol-3,4,5-trisphosphate binding // inferred from sequence or structural similarity /// 0008289 // lipid binding // inferred from electronic annotation /// 0032266 // phosphatidylinositol-3-phosphate binding // inferred from sequence or structural similarity","chr10:34601189-35104211 (-) // 92.45 // p11.21"]
["11746108_a_at",0.10073471,0.040234566,0.009416103,-0.08936882,-0.009416103,-0.04023409,0.36845154,0.05319784,1.0691528,0.0964681,1.0691528,"up","MPP2",4355.0,"0007165 // signal transduction // traceable author statement","0005624 // membrane fraction // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from direct assay","0004385 // guanylate kinase activity // traceable author statement","chr17:41953532-41977992 (-) // 97.74 // q21.31"]
["11754897_a_at",0.043148518,-0.0060338974,0.0060338974,0.00897789,-0.04620886,-0.15423107,0.5801553,0.19400482,1.0557027,0.07820359,1.0557027,"up","ACSF3",197322.0,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from direct assay /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006633 // fatty acid biosynthetic process // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation /// 0090410 // malonate catabolic process // inferred from direct assay","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016878 // acid-thiol ligase activity // inferred from direct assay /// 0090409 // malonyl-CoA synthetase activity // inferred from direct assay","chr16:89202955-89222254 (+) // 99.8 // q24.3"]
["11731440_a_at",0.034011364,-0.014251232,0.085692406,0.012746334,-0.036441803,-0.012746334,0.60296345,0.21535543,1.0333279,0.04729818,1.0333279,"up","IFT57",55081.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from direct assay /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0042981 // regulation of apoptotic process // inferred from direct assay","0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0005932 // microtubule basal body // inferred from sequence or structural similarity /// 0005932 // microtubule basal body // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr3:107879658-107941417 (-) // 94.57 // q13.12"]
["11718683_s_at",-0.044093132,0.17435193,0.023985386,-0.023985386,-0.14606571,0.07256651,0.7430249,0.40568152,1.0598863,0.083909556,1.0598863,"up","AFP",174.0,"0001542 // ovulation from ovarian follicle // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0019953 // sexual reproduction // inferred from electronic annotation /// 0031016 // pancreas development // inferred from electronic annotation /// 0031100 // organ regeneration // inferred from electronic annotation /// 0042448 // progesterone metabolic process // inferred from electronic annotation /// 0060395 // SMAD protein signal transduction // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0046872 // metal ion binding // inferred from electronic annotation","chr4:74301879-74321891 (+) // 97.83 // q13.3"]
["11740271_at",-0.061312437,0.031609535,-0.0633502,0.119273424,0.24364758,-0.031609297,0.55869377,0.17347275,-1.103017,-0.141455,1.103017,"down","KIAA1383",54627.0,"","","","chr1:232940637-232946092 (+) // 94.45 // q42.2"]
["11743659_a_at",0.0052399635,-0.031678677,0.14319801,-0.111326694,-0.0052399635,0.04351139,0.7511974,0.41809735,1.0448323,0.06327147,1.0448323,"up","SNRNP27",11017.0,"0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // non-traceable author statement","chr2:70120691-70132348 (+) // 76.16 // p13.3"]
["11738627_a_at",0.021605492,-0.08671713,-0.021605492,0.26991224,-0.21274686,0.11953497,0.8373791,0.5800539,-1.0627526,-0.08780579,1.0627526,"down","ARHGAP6",395.0,"0007015 // actin filament organization // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007202 // activation of phospholipase C activity // inferred from direct assay /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007266 // Rho protein signal transduction // non-traceable author statement /// 0007266 // Rho protein signal transduction // traceable author statement /// 0010518 // positive regulation of phospholipase activity // inferred from direct assay /// 0030041 // actin filament polymerization // non-traceable author statement /// 0032321 // positive regulation of Rho GTPase activity // inferred from sequence or structural similarity /// 0032321 // positive regulation of Rho GTPase activity // inferred from electronic annotation /// 0043087 // regulation of GTPase activity // inferred from sequence or structural similarity /// 0043087 // regulation of GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0048041 // focal adhesion assembly // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement /// 0051497 // negative regulation of stress fiber assembly // inferred from mutant phenotype /// 0051895 // negative regulation of focal adhesion assembly // inferred from mutant phenotype","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from mutant phenotype /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005884 // actin filament // non-traceable author statement /// 0015629 // actin cytoskeleton // inferred from sequence or structural similarity /// 0015629 // actin cytoskeleton // inferred from electronic annotation","0005070 // SH3/SH2 adaptor activity // traceable author statement /// 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005100 // Rho GTPase activator activity // inferred from sequence or structural similarity /// 0005100 // Rho GTPase activator activity // inferred from electronic annotation /// 0016004 // phospholipase activator activity // inferred from direct assay /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0043274 // phospholipase binding // inferred from physical interaction","chrX:11161516-11683821 (-) // 97.28 // p22.2"]
["11760539_a_at",0.111518145,-0.023715734,-0.040264606,0.26353002,-0.09404516,0.023715496,0.8897415,0.69622684,-1.034228,-0.048554223,1.034228,"down","IBTK",25998.0,"0001933 // negative regulation of protein phosphorylation // inferred from direct assay /// 0051209 // release of sequestered calcium ion into cytosol // inferred from direct assay /// 0061099 // negative regulation of protein tyrosine kinase activity // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0019901 // protein kinase binding // inferred from direct assay /// 0030292 // protein tyrosine kinase inhibitor activity // inferred from direct assay","chr6:82901047-82957471 (-) // 100.0 // q14.1"]
["11715669_s_at",0.04272175,0.054862976,-0.06908369,-0.004087448,-0.14711905,0.004087448,0.74266934,0.4052505,1.0414114,0.058540102,1.0414114,"up","DCTN1",1639.0,"0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0007067 // mitosis // non-traceable author statement /// 0007399 // nervous system development // non-traceable author statement /// 0008219 // cell death // inferred from electronic annotation /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement","0000776 // kinetochore // inferred from direct assay /// 0000922 // spindle pole // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005868 // cytoplasmic dynein complex // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0005874 // microtubule // inferred from electronic annotation /// 0030286 // dynein complex // inferred from electronic annotation /// 0031252 // cell leading edge // inferred from electronic annotation","0003774 // motor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr2:74588284-74607482 (-) // 92.76 // p13.1"]
["11726170_at",-0.114881516,0.068090916,-0.0231781,-0.11781597,0.11956358,0.0231781,0.9067102,0.73410577,-1.0221674,-0.031631548,1.0221674,"down","FLT4",2324.0,"0001525 // angiogenesis // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from mutant phenotype /// 0001938 // positive regulation of endothelial cell proliferation // inferred from mutant phenotype /// 0001944 // vasculature development // inferred from sequence or structural similarity /// 0001944 // vasculature development // inferred from electronic annotation /// 0001945 // lymph vessel development // inferred from sequence or structural similarity /// 0001945 // lymph vessel development // inferred from electronic annotation /// 0001946 // lymphangiogenesis // inferred from mutant phenotype /// 0001946 // lymphangiogenesis // inferred from sequence or structural similarity /// 0001946 // lymphangiogenesis // inferred from electronic annotation /// 0002040 // sprouting angiogenesis // inferred from sequence or structural similarity /// 0002040 // sprouting angiogenesis // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // traceable author statement /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from genetic interaction /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0010575 // positive regulation vascular endothelial growth factor production // inferred from mutant phenotype /// 0010595 // positive regulation of endothelial cell migration // inferred from mutant phenotype /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0030307 // positive regulation of cell growth // inferred from electronic annotation /// 0035924 // cellular response to vascular endothelial growth factor stimulus // inferred from direct assay /// 0035924 // cellular response to vascular endothelial growth factor stimulus // inferred from mutant phenotype /// 0038084 // vascular endothelial growth factor signaling pathway // inferred from direct assay /// 0038084 // vascular endothelial growth factor signaling pathway // inferred from mutant phenotype /// 0038084 // vascular endothelial growth factor signaling pathway // traceable author statement /// 0038084 // vascular endothelial growth factor signaling pathway // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043410 // positive regulation of MAPK cascade // inferred from mutant phenotype /// 0046330 // positive regulation of JNK cascade // inferred from mutant phenotype /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0048010 // vascular endothelial growth factor receptor signaling pathway // inferred from direct assay /// 0048010 // vascular endothelial growth factor receptor signaling pathway // inferred from genetic interaction /// 0048010 // vascular endothelial growth factor receptor signaling pathway // inferred from mutant phenotype /// 0048010 // vascular endothelial growth factor receptor signaling pathway // traceable author statement /// 0048010 // vascular endothelial growth factor receptor signaling pathway // inferred from electronic annotation /// 0048514 // blood vessel morphogenesis // inferred from sequence or structural similarity /// 0048514 // blood vessel morphogenesis // inferred from electronic annotation /// 0060312 // regulation of blood vessel remodeling // inferred from sequence or structural similarity /// 0060312 // regulation of blood vessel remodeling // inferred from electronic annotation /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from mutant phenotype /// 0090037 // positive regulation of protein kinase C signaling cascade // inferred from mutant phenotype","0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from mutant phenotype /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0005021 // vascular endothelial growth factor-activated receptor activity // inferred from direct assay /// 0005021 // vascular endothelial growth factor-activated receptor activity // inferred from mutant phenotype /// 0005021 // vascular endothelial growth factor-activated receptor activity // inferred from electronic annotation /// 0005021 // vascular endothelial growth factor-activated receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019838 // growth factor binding // inferred from physical interaction /// 0019838 // growth factor binding // inferred from electronic annotation /// 0019903 // protein phosphatase binding // inferred from physical interaction","chr5:180028505-180076678 (-) // 99.74 // q35.3"]
["11752178_a_at",-0.05978203,-0.048764467,0.048764706,0.15812373,0.11319089,-0.1507771,0.8419195,0.58855104,-1.0425427,-0.060106467,1.0425427,"down","SEMA4D",10507.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from direct assay /// 0006916 // anti-apoptosis // traceable author statement /// 0006955 // immune response // traceable author statement /// 0007155 // cell adhesion // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0008360 // regulation of cell shape // inferred from mutant phenotype /// 0010693 // negative regulation of alkaline phosphatase activity // inferred from mutant phenotype /// 0010693 // negative regulation of alkaline phosphatase activity // inferred from electronic annotation /// 0014068 // positive regulation of phosphatidylinositol 3-kinase cascade // inferred from mutant phenotype /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0030335 // positive regulation of cell migration // inferred from sequence or structural similarity /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0031344 // regulation of cell projection organization // inferred from mutant phenotype /// 0032321 // positive regulation of Rho GTPase activity // inferred from mutant phenotype /// 0032321 // positive regulation of Rho GTPase activity // inferred from sequence or structural similarity /// 0032321 // positive regulation of Rho GTPase activity // inferred from electronic annotation /// 0043931 // ossification involved in bone maturation // inferred from mutant phenotype /// 0043931 // ossification involved in bone maturation // inferred from electronic annotation /// 0045668 // negative regulation of osteoblast differentiation // inferred from sequence or structural similarity /// 0045668 // negative regulation of osteoblast differentiation // inferred from electronic annotation /// 0048672 // positive regulation of collateral sprouting // inferred from mutant phenotype /// 0048814 // regulation of dendrite morphogenesis // inferred from mutant phenotype /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from sequence or structural similarity /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0050732 // negative regulation of peptidyl-tyrosine phosphorylation // inferred from sequence or structural similarity /// 0050732 // negative regulation of peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0050772 // positive regulation of axonogenesis // inferred from electronic annotation /// 0061383 // trabecula morphogenesis // inferred from sequence or structural similarity /// 0061383 // trabecula morphogenesis // inferred from electronic annotation /// 0070486 // leukocyte aggregation // inferred from mutant phenotype /// 0071526 // semaphorin-plexin signaling pathway // inferred from mutant phenotype","0005615 // extracellular space // inferred from sequence or structural similarity /// 0005615 // extracellular space // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from direct assay /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from mutant phenotype /// 0005102 // receptor binding // inferred from direct assay /// 0005102 // receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0030215 // semaphorin receptor binding // inferred from sequence or structural similarity /// 0030215 // semaphorin receptor binding // inferred from electronic annotation","chr9:91977153-92070868 (-) // 88.04 // q22.2"]
["11742535_x_at",-0.17496634,-0.054605007,-0.15919638,0.2107439,0.054605007,0.1426053,0.20247352,0.01074776,-1.2021142,-0.26557398,1.2021142,"down","FAM58BP",339521.0,"0000079 // regulation of cyclin-dependent protein kinase activity // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","","0019901 // protein kinase binding // inferred from electronic annotation","chr1:200182655-200183643 (+) // 94.74 // q32.1"]
["11723101_a_at",0.061473846,-0.015935898,0.061905384,0.0050697327,-0.061367035,-0.0050697327,0.54794884,0.16449349,1.0397741,0.056270067,1.0397741,"up","DDX10",1662.0,"","","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003724 // RNA helicase activity // traceable author statement /// 0004386 // helicase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr11:108535803-108811654 (+) // 96.83 // q22.3"]
["11721897_a_at",-0.041856766,-0.14618206,-0.119894505,0.073147774,0.041857243,0.082110405,0.17863429,0.007450543,-1.1237721,-0.16834955,1.1237721,"down","DHX58",79132.0,"0009615 // response to virus // inferred from sequence or structural similarity /// 0009615 // response to virus // inferred from electronic annotation /// 0032480 // negative regulation of type I interferon production // inferred from direct assay /// 0032481 // positive regulation of type I interferon production // inferred from sequence or structural similarity /// 0039534 // negative regulation of MDA-5 signaling pathway // inferred from mutant phenotype /// 0039536 // negative regulation of RIG-I signaling pathway // inferred from direct assay /// 0039536 // negative regulation of RIG-I signaling pathway // inferred from mutant phenotype /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045087 // innate immune response // inferred from electronic annotation /// 0045088 // regulation of innate immune response // inferred from direct assay /// 0045824 // negative regulation of innate immune response // inferred from direct assay /// 1900245 // positive regulation of MDA-5 signaling pathway // inferred from sequence or structural similarity /// 1900246 // positive regulation of RIG-I signaling pathway // inferred from sequence or structural similarity","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003725 // double-stranded RNA binding // inferred from direct assay /// 0003727 // single-stranded RNA binding // inferred from direct assay /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016817 // hydrolase activity, acting on acid anhydrides // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:40253421-40264751 (-) // 96.64 // q21.2"]
["11753099_a_at",0.028905392,-0.25689793,-0.027153969,0.088848114,0.027153969,-0.31762218,0.9726067,0.91320854,-1.012444,-0.01784214,1.012444,"down","SORBS3",10174.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006936 // muscle contraction // traceable author statement /// 0007155 // cell adhesion // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0031589 // cell-substrate adhesion // inferred from electronic annotation /// 0043410 // positive regulation of MAPK cascade // inferred from electronic annotation /// 0051495 // positive regulation of cytoskeleton organization // non-traceable author statement /// 0051496 // positive regulation of stress fiber assembly // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0005925 // focal adhesion // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","0005200 // structural constituent of cytoskeleton // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0017166 // vinculin binding // inferred from physical interaction","chr8:22409439-22424207 (+) // 99.92 // p21.3"]
["11757127_at",0.04723835,-0.13211036,-0.02529955,-0.10486698,0.22567272,0.02529955,0.7875614,0.47828242,-1.0610007,-0.085425615,1.0610007,"down","SNORA23",677808.0,"","","","chr11:9450312-9450501 (+) // 99.47 // p15.4"]
["11737769_a_at",-0.033713818,-0.16669464,0.033713818,0.049342155,-0.06633186,0.03463459,0.7559557,0.42470858,-1.0435115,-0.061446514,1.0435115,"down","MYO1C",4641.0,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0051028 // mRNA transport // inferred from electronic annotation","0001725 // stress fiber // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005643 // nuclear pore // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005902 // microvillus // inferred from direct assay /// 0005903 // brush border // inferred from electronic annotation /// 0009925 // basal plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016328 // lateral plasma membrane // inferred from direct assay /// 0016459 // myosin complex // inferred from electronic annotation /// 0016461 // unconventional myosin complex // traceable author statement /// 0031941 // filamentous actin // inferred from direct assay /// 0032420 // stereocilium // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0045160 // myosin I complex // inferred from electronic annotation /// 0060171 // stereocilium membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003774 // motor activity // inferred from electronic annotation /// 0003779 // actin binding // inferred from electronic annotation /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008022 // protein C-terminus binding // inferred from electronic annotation","chr17:1367481-1389495 (-) // 87.7 // p13.3"]
["11725994_a_at",0.0011429787,0.09055138,-0.0011429787,-0.017248154,0.022215843,-0.038856983,0.67301005,0.3026113,1.0291692,0.04148019,1.0291692,"up","MRPL11",65003.0,"0006412 // translation // non-traceable author statement /// 0006412 // translation // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005761 // mitochondrial ribosome // non-traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003735 // structural constituent of ribosome // non-traceable author statement /// 0003735 // structural constituent of ribosome // inferred from electronic annotation","chr11:66202549-66206299 (-) // 84.49 // q13.2"]
["11734788_at",-0.06398201,-0.018191338,0.018191338,-0.025451899,0.3017931,0.06131959,0.634611,0.2545351,-1.0972414,-0.13388096,1.0972414,"down","OLFM3",118427.0,"0042462 // eye photoreceptor cell development // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation","","chr1:102268126-102462790 (-) // 96.6 // p21.1"]
["11734033_at",-0.11968374,-0.13154793,0.07118654,0.07397795,-0.07118654,0.21429205,0.6523432,0.27745882,-1.0960976,-0.13237625,1.0960976,"down","C15orf61",145853.0,"","0005576 // extracellular region // inferred from electronic annotation","","chr15:67813405-67819735 (+) // 100.0 // q23"]
["11722956_at",-0.035562515,-0.025348663,0.025348663,0.09883976,-0.07677364,0.10694885,0.75978506,0.4318344,-1.0387577,-0.054859146,1.0387577,"down","GLTPD2",388323.0,"0046836 // glycolipid transport // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0017089 // glycolipid transporter activity // inferred from electronic annotation /// 0051861 // glycolipid binding // inferred from electronic annotation","chr17:4692253-4693685 (+) // 99.61 // p13.2"]
["11744500_a_at",0.049598694,0.0130319595,0.022102356,-0.015206337,-0.0130319595,-0.02965355,0.24539086,0.017437432,1.0335023,0.047541656,1.0335023,"up","ASXL1",171023.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0032526 // response to retinoic acid // inferred from sequence or structural similarity /// 0035359 // negative regulation of peroxisome proliferator activated receptor signaling pathway // inferred from sequence or structural similarity /// 0035522 // monoubiquitinated histone H2A deubiquitination // inferred from direct assay /// 0045599 // negative regulation of fat cell differentiation // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0048386 // positive regulation of retinoic acid receptor signaling pathway // inferred from sequence or structural similarity /// 0048387 // negative regulation of retinoic acid receptor signaling pathway // inferred from sequence or structural similarity","0000790 // nuclear chromatin // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0035517 // PR-DUB complex // inferred from direct assay","0003713 // transcription coactivator activity // inferred from sequence or structural similarity /// 0003714 // transcription corepressor activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0042974 // retinoic acid receptor binding // inferred from sequence or structural similarity /// 0042975 // peroxisome proliferator activated receptor binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation","chr20:30947549-31027121 (+) // 99.97 // q11.21"]
["11763440_at",0.03993416,-0.03993416,0.04318142,-0.20526934,0.07586336,-0.10860491,0.7008578,0.34111422,1.0671262,0.09373074,1.0671262,"up","MLPH",79083.0,"0006605 // protein targeting // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0030318 // melanocyte differentiation // inferred from electronic annotation /// 0032400 // melanosome localization // inferred from electronic annotation /// 0043473 // pigmentation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0017022 // myosin binding // inferred from electronic annotation /// 0017137 // Rab GTPase binding // inferred from electronic annotation /// 0031489 // myosin V binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051010 // microtubule plus-end binding // inferred from electronic annotation","chr2:238457795-238460620 (+) // 73.7 // q37.3"]
["11761552_at",-0.10374546,-0.04355955,-0.12565327,0.04355955,0.18599224,0.102786064,0.22368346,0.013706797,-1.1501049,-0.20176543,1.1501049,"down","C15orf29",79768.0,"","0005730 // nucleolus // inferred from direct assay","","chr15:34440436-34502262 (-) // 76.25 // q14"]
["11744354_a_at",0.057932377,0.16174316,-0.09477091,0.039022923,-0.08186436,-0.0390234,0.7699168,0.4503378,1.0489335,0.06892323,1.0489335,"up","TATDN2",9797.0,"0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0004518 // nuclease activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016888 // endodeoxyribonuclease activity, producing 5'-phosphomonoesters // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:10290218-10323014 (+) // 99.07 // p25.3"]
["11741030_a_at",-0.113322735,-0.09760761,-0.010969639,0.03466797,0.025744915,0.010969639,0.33285198,0.03986297,-1.0701113,-0.09776082,1.0701113,"down","PTCD2",79810.0,"0001822 // kidney development // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0007005 // mitochondrion organization // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0048747 // muscle fiber development // inferred from electronic annotation /// 0050684 // regulation of mRNA processing // inferred from electronic annotation /// 0055010 // ventricular cardiac muscle tissue morphogenesis // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation","","chr5:71616199-71655180 (+) // 99.9 // q13.2"]
["11721240_at",-0.027497768,0.13046408,-0.09375143,-0.09445238,0.027497768,0.052485466,0.9770133,0.92661184,1.0054872,0.007894721,1.0054872,"up","ZNF787",126208.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:56598731-56632678 (-) // 86.34 // q13.43"]
["11718047_a_at",0.010958672,-0.060383797,0.06554794,-0.010959148,0.051706314,-0.025580883,0.9981676,0.9945013,1.000221,3.188206E-4,1.000221,"up","ITPK1",3705.0,"0007165 // signal transduction // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008152 // metabolic process // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0032957 // inositol trisphosphate metabolic process // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0003824 // catalytic activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047325 // inositol tetrakisphosphate 1-kinase activity // inferred from electronic annotation /// 0052725 // inositol-1,3,4-trisphosphate 6-kinase activity // inferred from electronic annotation /// 0052726 // inositol-1,3,4-trisphosphate 5-kinase activity // inferred from electronic annotation","chr14:93403258-93582263 (-) // 91.79 // q32.12"]
["11720597_s_at",0.01640129,-0.017855644,-0.013082027,0.058279037,-0.057284355,0.013082027,0.9333221,0.8003172,-1.0066329,-0.00953769,1.0066329,"down","CSRNP2",81566.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0010923 // negative regulation of phosphatase activity // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from sequence or structural similarity /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019902 // phosphatase binding // inferred from direct assay","chr12:51454989-51477377 (-) // 97.08 // q13.12"]
["11717857_a_at",-0.00699234,-0.039531708,-0.0046482086,0.018640518,0.018640518,0.0046482086,0.39280275,0.06352107,-1.021744,-0.03103379,1.021744,"down","DHX29",54505.0,"0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr5:54551890-54603521 (-) // 96.85 // q11.2"]
["11723794_a_at",0.013088226,-0.013088226,-0.19049978,-0.049215317,0.09182119,0.020770073,0.6909688,0.32682467,-1.0604123,-0.08462529,1.0604123,"down","SLC29A2",3177.0,"0006139 // nucleobase-containing compound metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007595 // lactation // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0015853 // adenine transport // inferred from electronic annotation /// 0015854 // guanine transport // inferred from electronic annotation /// 0015858 // nucleoside transport // inferred from direct assay /// 0015858 // nucleoside transport // inferred from electronic annotation /// 0015858 // nucleoside transport // traceable author statement /// 0015862 // uridine transport // inferred from electronic annotation /// 0032869 // cellular response to insulin stimulus // inferred from electronic annotation /// 0035344 // hypoxanthine transport // inferred from electronic annotation /// 0035364 // thymine transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from direct assay /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation","0005337 // nucleoside transmembrane transporter activity // inferred from electronic annotation /// 0005337 // nucleoside transmembrane transporter activity // traceable author statement","chr11:66129558-66139961 (-) // 85.71 // q13.2"]
["11744478_s_at",0.178051,-0.12416649,-0.037341356,0.037341595,0.041137695,-0.08688712,0.98126906,0.9372068,1.0057815,0.008316967,1.0057815,"up","HBG1 /// HBG2 /// LOC100653006 /// LOC100653319","100653006 /// 100653319 /// 3047 /// 3048","0002026 // regulation of the force of heart contraction // inferred from mutant phenotype /// 0006810 // transport // inferred from electronic annotation /// 0007517 // muscle organ development // non-traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0015671 // oxygen transport // inferred from electronic annotation /// 0030049 // muscle filament sliding // traceable author statement /// 0032781 // positive regulation of ATPase activity // inferred from mutant phenotype /// 0060048 // cardiac muscle contraction // inferred from mutant phenotype","0005829 // cytosol // traceable author statement /// 0005833 // hemoglobin complex // inferred from electronic annotation /// 0005859 // muscle myosin complex // non-traceable author statement /// 0016459 // myosin complex // inferred from electronic annotation /// 0031672 // A band // inferred from mutant phenotype","0003785 // actin monomer binding // inferred from direct assay /// 0005344 // oxygen transporter activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0008307 // structural constituent of muscle // non-traceable author statement /// 0019825 // oxygen binding // inferred from electronic annotation /// 0020037 // heme binding // inferred from electronic annotation /// 0032038 // myosin II heavy chain binding // non-traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051015 // actin filament binding // inferred from mutant phenotype","chr11:5274421-5276011 (-) // 89.95 // p15.4"]
["11751574_a_at",-0.015286446,0.015286446,-0.18994331,0.06687164,0.028536797,-0.12537766,0.8347612,0.5722973,-1.0376534,-0.053324696,1.0376534,"down","TMEM119",338773.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr12:108985051-108991833 (-) // 97.52 // q23.3"]
["11758986_at",0.021072388,0.115507126,-0.15968418,-0.016834259,0.016834259,-0.028450966,0.99489474,0.9836755,1.001236,0.0017820151,1.001236,"up","ZNF48",197407.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:30406770-30411429 (+) // 90.37 // p11.2"]
["11759807_a_at",0.040872335,0.03932309,-0.20505095,0.08729577,-0.09358835,-0.03932309,0.9333221,0.80031145,-1.018477,-0.026413348,1.018477,"down","TXLNG2P",246126.0,"","","","chrY:21729672-21751733 (+) // 84.18 // q11.222"]
["11722339_a_at",-0.14942741,-0.18859434,0.15775585,0.035927773,0.011143684,-0.011143208,0.8239848,0.5493474,-1.05122,-0.07206471,1.05122,"down","DIAPH2",1730.0,"0000910 // cytokinesis // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007292 // female gamete generation // traceable author statement /// 0016043 // cellular component organization // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030041 // actin filament polymerization // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0048477 // oogenesis // inferred from electronic annotation","0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0003779 // actin binding // inferred from electronic annotation /// 0005102 // receptor binding // traceable author statement /// 0017048 // Rho GTPase binding // inferred from electronic annotation","chrX:95939661-96724837 (+) // 99.5 // q21.33"]
["11726523_s_at",-0.021962166,-0.0072689056,0.019205093,0.011553764,-0.051042557,0.0072689056,0.9214787,0.7687339,1.005141,0.0073979236,1.005141,"up","ZFHX3",463.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from genetic interaction /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0007517 // muscle organ development // inferred from electronic annotation /// 0045662 // negative regulation of myoblast differentiation // inferred from direct assay /// 0045663 // positive regulation of myoblast differentiation // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:72816787-73082274 (-) // 95.7 // q22.2"]
["11728566_x_at",-0.02282381,0.030509472,0.029982567,0.02282381,-0.03389597,-0.025541782,0.72479624,0.3782088,1.017311,0.024760757,1.017311,"up","FAM210A",125228.0,"","0005739 // mitochondrion // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr18:13663345-13726591 (-) // 82.65 // p11.21"]
["11746202_x_at",-0.36336946,-0.020498276,0.108474255,-0.077352524,0.120651245,0.020498276,0.7967644,0.49818182,-1.0815223,-0.11306347,1.0815223,"down","NAB1",4664.0,"0001958 // endochondral ossification // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0014037 // Schwann cell differentiation // inferred from electronic annotation /// 0042552 // myelination // inferred from electronic annotation /// 0045682 // regulation of epidermis development // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // non-traceable author statement /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0008134 // transcription factor binding // inferred from electronic annotation","chr2:191513759-191555999 (+) // 95.63 // q32.2"]
["11754138_s_at",1.2588501E-4,-0.019153595,0.07692337,-1.2588501E-4,-0.057860374,0.009460449,0.7267884,0.38141093,1.0248934,0.035473865,1.0248934,"up","PSPH",5723.0,"0006563 // L-serine metabolic process // inferred from direct assay /// 0006563 // L-serine metabolic process // traceable author statement /// 0006564 // L-serine biosynthetic process // not recorded /// 0006564 // L-serine biosynthetic process // traceable author statement /// 0006564 // L-serine biosynthetic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008652 // cellular amino acid biosynthetic process // traceable author statement /// 0008652 // cellular amino acid biosynthetic process // inferred from electronic annotation /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0031667 // response to nutrient levels // inferred from electronic annotation /// 0033574 // response to testosterone stimulus // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005737 // cytoplasm // not recorded /// 0005829 // cytosol // traceable author statement /// 0019717 // synaptosome // inferred from electronic annotation","0000287 // magnesium ion binding // inferred from direct assay /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004647 // phosphoserine phosphatase activity // inferred from direct assay /// 0004647 // phosphoserine phosphatase activity // traceable author statement /// 0004647 // phosphoserine phosphatase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:56079260-56088925 (-) // 49.3 // p11.2"]
["11722719_s_at",-0.010360718,0.014032364,-0.0481987,0.039388657,-0.01958847,0.010360718,0.7220225,0.37314412,-1.0174063,-0.024895996,1.0174063,"down","BAIAP2",10458.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007409 // axonogenesis // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0009617 // response to bacterium // inferred from mutant phenotype /// 0016358 // dendrite development // inferred from electronic annotation /// 0032956 // regulation of actin cytoskeleton organization // inferred from mutant phenotype /// 0046847 // filopodium assembly // inferred from electronic annotation /// 0048167 // regulation of synaptic plasticity // inferred from electronic annotation /// 0051017 // actin filament bundle assembly // inferred from electronic annotation","0001726 // ruffle // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from direct assay /// 0030175 // filopodium // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // traceable author statement /// 0008093 // cytoskeletal adaptor activity // inferred from electronic annotation /// 0008093 // cytoskeletal adaptor activity // traceable author statement /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0070064 // proline-rich region binding // inferred from direct assay","chr17:79008946-79084378 (+) // 98.74 // q25.3"]
["11763392_at",-0.022301197,0.024396896,0.06405926,0.022301197,-0.037577152,-0.069710255,0.6250655,0.24218047,1.035538,0.050380435,1.035538,"up","LOC100132005",1.00132005E8,"","","","chr6:38147073-38149010 (+) // 99.64 // p21.2"]
["11763882_at",-0.043623447,0.05514002,0.025042057,-0.121501446,-0.0072140694,0.0072140694,0.7084968,0.35245603,1.0371946,0.052686613,1.0371946,"up","","","","","","chr9:128506035-128508208 (-) // 97.61 // q33.3"]
["11727631_s_at",-0.14579725,-0.020660877,0.020751,0.080827236,-0.026840687,0.020660877,0.6554555,0.2808555,-1.0522311,-0.073451556,1.0522311,"down","APBA2",321.0,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0035264 // multicellular organism growth // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation","0001540 // beta-amyloid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr15:29131174-29410518 (+) // 97.63 // q13.1"]
["11722485_a_at",4.6730042E-4,-4.6730042E-4,0.0065379143,0.047931194,-0.04506159,-0.016923904,0.93894535,0.8159767,1.0047692,0.0068641547,1.0047692,"up","UTP14C",9724.0,"0006364 // rRNA processing // inferred from electronic annotation /// 0007126 // meiosis // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0042254 // ribosome biogenesis // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0032040 // small-subunit processome // inferred from electronic annotation","","chr13:52586522-52607790 (+) // 88.83 // q14.3"]
["11724880_s_at",0.026920795,0.041706562,0.14890194,-0.095229626,-0.062441826,-0.026920795,0.32016227,0.036122367,1.0973628,0.13404052,1.0973628,"up","ZNF217",7764.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay","0000118 // histone deacetylase complex // inferred from direct assay /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr20:52183609-52199636 (-) // 99.06 // q13.2"]
["11738336_at",-0.074216366,0.018848896,0.0606308,-0.018848658,-0.078314066,0.15979862,0.9427099,0.82683295,-1.0133442,-0.019124249,1.0133442,"down","C7orf65",401335.0,"","","","chr7:47694841-47701246 (+) // 87.67 // p12.3"]
["11715348_x_at",-0.09328842,-0.047764778,-0.03429079,0.04906082,0.21227217,0.034290314,0.38099095,0.058351923,-1.1149578,-0.15698911,1.1149578,"down","HBB",3043.0,"0006810 // transport // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008217 // regulation of blood pressure // inferred from electronic annotation /// 0010942 // positive regulation of cell death // inferred from direct assay /// 0015671 // oxygen transport // non-traceable author statement /// 0015671 // oxygen transport // traceable author statement /// 0015671 // oxygen transport // inferred from electronic annotation /// 0030185 // nitric oxide transport // non-traceable author statement /// 0042542 // response to hydrogen peroxide // inferred from direct assay /// 0042744 // hydrogen peroxide catabolic process // inferred from direct assay /// 0045429 // positive regulation of nitric oxide biosynthetic process // non-traceable author statement /// 0050880 // regulation of blood vessel size // inferred from electronic annotation /// 0051291 // protein heterooligomerization // inferred from direct assay /// 0070293 // renal absorption // inferred from mutant phenotype","0005829 // cytosol // traceable author statement /// 0005833 // hemoglobin complex // inferred from direct assay /// 0005833 // hemoglobin complex // non-traceable author statement /// 0005833 // hemoglobin complex // traceable author statement /// 0005833 // hemoglobin complex // inferred from electronic annotation /// 0031838 // haptoglobin-hemoglobin complex // inferred from direct assay","0004601 // peroxidase activity // inferred from direct assay /// 0005344 // oxygen transporter activity // non-traceable author statement /// 0005344 // oxygen transporter activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019825 // oxygen binding // inferred from direct assay /// 0019825 // oxygen binding // inferred from electronic annotation /// 0020037 // heme binding // inferred from electronic annotation /// 0030492 // hemoglobin binding // inferred from direct assay /// 0031720 // haptoglobin binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:5246694-5248427 (-) // 79.06 // p15.4"]
["11739841_a_at",-0.019175053,-0.048880577,-0.28145838,0.053407192,0.01917553,0.07620716,0.49339762,0.12096161,-1.1220223,-0.1661013,1.1220223,"down","BCL6",604.0,"0000060 // protein import into nucleus, translocation // inferred from genetic interaction /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0000902 // cell morphogenesis // inferred from electronic annotation /// 0001953 // negative regulation of cell-matrix adhesion // inferred from electronic annotation /// 0002467 // germinal center formation // inferred from electronic annotation /// 0002634 // regulation of germinal center formation // non-traceable author statement /// 0002829 // negative regulation of type 2 immune response // inferred from electronic annotation /// 0002903 // negative regulation of B cell apoptotic process // non-traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from direct assay /// 0007266 // Rho protein signal transduction // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0008104 // protein localization // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030183 // B cell differentiation // inferred from electronic annotation /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0030890 // positive regulation of B cell proliferation // inferred from electronic annotation /// 0032319 // regulation of Rho GTPase activity // inferred from electronic annotation /// 0032764 // negative regulation of mast cell cytokine production // inferred from electronic annotation /// 0035024 // negative regulation of Rho protein signal transduction // inferred from electronic annotation /// 0042092 // type 2 immune response // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043380 // regulation of memory T cell differentiation // inferred from electronic annotation /// 0045596 // negative regulation of cell differentiation // inferred from electronic annotation /// 0045629 // negative regulation of T-helper 2 cell differentiation // inferred from electronic annotation /// 0045749 // negative regulation of S phase of mitotic cell cycle // non-traceable author statement /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-dependent // non-traceable author statement /// 0048294 // negative regulation of isotype switching to IgE isotypes // inferred from electronic annotation /// 0048821 // erythrocyte development // inferred from electronic annotation /// 0050727 // regulation of inflammatory response // inferred from electronic annotation /// 0050776 // regulation of immune response // non-traceable author statement /// 0051272 // positive regulation of cellular component movement // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005657 // replication fork // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from direct assay /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0031490 // chromatin DNA binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:187439164-187459050 (-) // 96.21 // q27.3"]
["11750146_a_at",0.11407256,0.11621857,0.01946044,-0.32819176,-0.01946044,-0.22926211,0.35117003,0.04606605,1.21046,0.27555534,1.21046,"up","TKTL1",8277.0,"0006007 // glucose catabolic process // traceable author statement /// 0006772 // thiamine metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004802 // transketolase activity // inferred from electronic annotation /// 0004802 // transketolase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chrX:153524123-153558282 (+) // 99.75 // q28"]
["11715895_at",-0.002632618,0.002632618,0.17929316,-0.043356895,0.03241396,-0.25818253,0.61543125,0.2298089,1.1091641,0.14947285,1.1091641,"up","SCARB2",950.0,"0006622 // protein targeting to lysosome // inferred from mutant phenotype /// 0006622 // protein targeting to lysosome // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from sequence or structural similarity /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0043202 // lysosomal lumen // inferred from sequence or structural similarity /// 0043202 // lysosomal lumen // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from electronic annotation","chr4:77079889-77135039 (-) // 89.53 // q21.1"]
["11750080_a_at",-0.0054044724,0.0054044724,-0.13311672,0.03083992,-0.05076599,0.032152176,0.7437858,0.40633872,-1.0341516,-0.048447628,1.0341516,"down","DDB2",1643.0,"0000209 // protein polyubiquitination // inferred from direct assay /// 0000718 // nucleotide-excision repair, DNA damage removal // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006289 // nucleotide-excision repair // traceable author statement /// 0006290 // pyrimidine dimer repair // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0009411 // response to UV // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0051865 // protein autoubiquitination // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0043234 // protein complex // inferred from direct assay","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003684 // damaged DNA binding // traceable author statement /// 0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction","chr11:47236644-47260400 (+) // 99.09 // p11.2"]
["11737213_at",0.12705278,0.039119482,-0.13823915,-0.07060766,0.21814156,-0.03911972,0.94534135,0.83434176,-1.018769,-0.026827002,1.018769,"down","C12orf61",283416.0,"","","","chr12:62995530-62997470 (-) // 89.38 // q14.1"]
["11748483_a_at",0.006769657,-0.006769657,0.25209594,-0.006769657,-0.0402534,0.18690777,0.91373295,0.75083524,1.0262653,0.03740368,1.0262653,"up","P2RX7",5027.0,"0000187 // activation of MAPK activity // inferred from electronic annotation /// 0000902 // cell morphogenesis // inferred from electronic annotation /// 0001845 // phagolysosome assembly // inferred from electronic annotation /// 0001916 // positive regulation of T cell mediated cytotoxicity // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from electronic annotation /// 0002028 // regulation of sodium ion transport // inferred from sequence or structural similarity /// 0002028 // regulation of sodium ion transport // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006509 // membrane protein ectodomain proteolysis // inferred from electronic annotation /// 0006649 // phospholipid transfer to membrane // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0006884 // cell volume homeostasis // inferred from electronic annotation /// 0006900 // membrane budding // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from electronic annotation /// 0007005 // mitochondrion organization // inferred from electronic annotation /// 0007009 // plasma membrane organization // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from sequence or structural similarity /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0009617 // response to bacterium // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0010043 // response to zinc ion // inferred from electronic annotation /// 0010467 // gene expression // inferred from electronic annotation /// 0010524 // positive regulation of calcium ion transport into cytosol // inferred from direct assay /// 0014049 // positive regulation of glutamate secretion // inferred from electronic annotation /// 0014054 // positive regulation of gamma-aminobutyric acid secretion // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0016079 // synaptic vesicle exocytosis // inferred from electronic annotation /// 0016485 // protein processing // inferred from electronic annotation /// 0019228 // regulation of action potential in neuron // inferred from electronic annotation /// 0019233 // sensory perception of pain // inferred from sequence or structural similarity /// 0019233 // sensory perception of pain // inferred from electronic annotation /// 0019835 // cytolysis // inferred from electronic annotation /// 0030501 // positive regulation of bone mineralization // inferred from sequence or structural similarity /// 0030501 // positive regulation of bone mineralization // inferred from electronic annotation /// 0031668 // cellular response to extracellular stimulus // inferred from electronic annotation /// 0032060 // bleb assembly // inferred from sequence or structural similarity /// 0032060 // bleb assembly // inferred from electronic annotation /// 0032308 // positive regulation of prostaglandin secretion // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0032731 // positive regulation of interleukin-1 beta production // inferred from electronic annotation /// 0032755 // positive regulation of interleukin-6 production // inferred from electronic annotation /// 0032963 // collagen metabolic process // inferred from electronic annotation /// 0033198 // response to ATP // inferred from direct assay /// 0033198 // response to ATP // inferred from electronic annotation /// 0034405 // response to fluid shear stress // inferred from electronic annotation /// 0035590 // purinergic nucleotide receptor signaling pathway // inferred from direct assay /// 0035590 // purinergic nucleotide receptor signaling pathway // inferred from electronic annotation /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0042098 // T cell proliferation // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from sequence or structural similarity /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043029 // T cell homeostasis // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043085 // positive regulation of catalytic activity // inferred from electronic annotation /// 0043132 // NAD transport // inferred from electronic annotation /// 0043409 // negative regulation of MAPK cascade // inferred from sequence or structural similarity /// 0043409 // negative regulation of MAPK cascade // inferred from electronic annotation /// 0043410 // positive regulation of MAPK cascade // inferred from electronic annotation /// 0044254 // multicellular organismal protein catabolic process // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045332 // phospholipid translocation // inferred from electronic annotation /// 0045778 // positive regulation of ossification // inferred from electronic annotation /// 0045779 // negative regulation of bone resorption // inferred from sequence or structural similarity /// 0045779 // negative regulation of bone resorption // inferred from electronic annotation /// 0045919 // positive regulation of cytolysis // inferred from sequence or structural similarity /// 0045919 // positive regulation of cytolysis // inferred from electronic annotation /// 0046513 // ceramide biosynthetic process // inferred from electronic annotation /// 0046931 // pore complex assembly // inferred from direct assay /// 0046931 // pore complex assembly // inferred from electronic annotation /// 0048705 // skeletal system morphogenesis // inferred from electronic annotation /// 0048873 // homeostasis of number of cells within a tissue // inferred from electronic annotation /// 0050714 // positive regulation of protein secretion // inferred from electronic annotation /// 0050715 // positive regulation of cytokine secretion // inferred from electronic annotation /// 0050717 // positive regulation of interleukin-1 alpha secretion // inferred from electronic annotation /// 0050718 // positive regulation of interleukin-1 beta secretion // inferred from direct assay /// 0050718 // positive regulation of interleukin-1 beta secretion // inferred from electronic annotation /// 0050830 // defense response to Gram-positive bacterium // inferred from electronic annotation /// 0051209 // release of sequestered calcium ion into cytosol // inferred from electronic annotation /// 0051259 // protein oligomerization // inferred from electronic annotation /// 0051495 // positive regulation of cytoskeleton organization // inferred from sequence or structural similarity /// 0051495 // positive regulation of cytoskeleton organization // inferred from electronic annotation /// 0051592 // response to calcium ion // inferred from electronic annotation /// 0051602 // response to electrical stimulus // inferred from electronic annotation /// 0051709 // regulation of killing of cells of other organism // non-traceable author statement /// 0051899 // membrane depolarization // inferred from direct assay /// 0051899 // membrane depolarization // inferred from electronic annotation /// 0051901 // positive regulation of mitochondrial depolarization // inferred from electronic annotation /// 0072593 // reactive oxygen species metabolic process // inferred from electronic annotation","0005639 // integral to nuclear inner membrane // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred by curator /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from electronic annotation /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0031594 // neuromuscular junction // inferred from electronic annotation /// 0032059 // bleb // inferred from sequence or structural similarity /// 0032059 // bleb // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043195 // terminal button // inferred from electronic annotation /// 0045121 // membrane raft // inferred from electronic annotation","0000287 // magnesium ion binding // inferred from electronic annotation /// 0001530 // lipopolysaccharide binding // inferred from sequence or structural similarity /// 0001530 // lipopolysaccharide binding // inferred from electronic annotation /// 0001614 // purinergic nucleotide receptor activity // inferred from direct assay /// 0001614 // purinergic nucleotide receptor activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004931 // extracellular ATP-gated cation channel activity // inferred from direct assay /// 0004931 // extracellular ATP-gated cation channel activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from sequence or structural similarity /// 0005102 // receptor binding // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005507 // copper ion binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred by curator /// 0005524 // ATP binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0015267 // channel activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // non-traceable author statement","chr12:121570682-121622605 (+) // 97.42 // q24.31"]
["11754111_s_at",0.014009953,0.028421879,-0.014009953,-0.03639078,0.10640907,-0.07657671,0.9499025,0.84764665,1.0081149,0.011660128,1.0081149,"up","PNOC",5368.0,"0007165 // signal transduction // traceable author statement /// 0007218 // neuropeptide signaling pathway // inferred from electronic annotation /// 0007268 // synaptic transmission // inferred from electronic annotation /// 0007600 // sensory perception // traceable author statement","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation","0001515 // opioid peptide activity // inferred from electronic annotation /// 0005184 // neuropeptide hormone activity // traceable author statement","chr8:28174801-28197003 (+) // 100.0 // p21.1"]
["11720167_at",0.045114994,0.015470982,-0.15172052,0.17757487,-0.015470982,-0.017596006,0.75801224,0.4278599,-1.0559543,-0.07854745,1.0559543,"down","SELL",6402.0,"0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0033198 // response to ATP // inferred from electronic annotation /// 0050776 // regulation of immune response // traceable author statement /// 0050900 // leukocyte migration // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0002020 // protease binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008201 // heparin binding // traceable author statement /// 0030246 // carbohydrate binding // traceable author statement /// 0030246 // carbohydrate binding // inferred from electronic annotation /// 0043208 // glycosphingolipid binding // traceable author statement /// 0050839 // cell adhesion molecule binding // inferred from electronic annotation","chr1:169659809-169680843 (-) // 97.84 // q24.2"]
["11743716_a_at",0.020638943,0.1141758,-0.040849686,-0.0027012825,0.0027012825,-0.020859241,0.769199,0.44877544,1.0268852,0.038274836,1.0268852,"up","BRWD1",54014.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0007010 // cytoskeleton organization // inferred from mutant phenotype /// 0008360 // regulation of cell shape // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","","chr21:40557403-40685556 (-) // 99.26 // q22.2"]
["11719983_a_at",0.16135979,0.12497187,0.11394787,-0.19730425,-0.11394787,-0.25429535,0.108540565,0.001731551,1.2500123,0.32194227,1.2500123,"up","INPP5A",3632.0,"0007154 // cell communication // non-traceable author statement /// 0046854 // phosphatidylinositol phosphorylation // inferred from electronic annotation","0016020 // membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0004445 // inositol-polyphosphate 5-phosphatase activity // non-traceable author statement /// 0004445 // inositol-polyphosphate 5-phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042731 // PH domain binding // inferred from physical interaction /// 0052658 // inositol-1,4,5-trisphosphate 5-phosphatase activity // inferred from electronic annotation /// 0052659 // inositol-1,3,4,5-tetrakisphosphate 5-phosphatase activity // inferred from electronic annotation","chr10:134351334-134597211 (+) // 89.71 // q26.3"]
["11753289_s_at",-0.052660227,0.05176878,0.25486445,-0.11175799,0.014864206,-0.014864206,0.6563613,0.28161347,1.0881748,0.12191035,1.0881748,"up","LOC100506403 /// RUNX1","100506403 /// 861","0001501 // skeletal system development // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0002318 // myeloid progenitor cell differentiation // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007417 // central nervous system development // inferred from electronic annotation /// 0009966 // regulation of signal transduction // inferred from electronic annotation /// 0030097 // hemopoiesis // inferred from direct assay /// 0030097 // hemopoiesis // traceable author statement /// 0030099 // myeloid cell differentiation // inferred from direct assay /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0030853 // negative regulation of granulocyte differentiation // inferred from mutant phenotype /// 0030854 // positive regulation of granulocyte differentiation // inferred from mutant phenotype /// 0030855 // epithelial cell differentiation // inferred from electronic annotation /// 0031069 // hair follicle morphogenesis // inferred from electronic annotation /// 0035162 // embryonic hemopoiesis // inferred from electronic annotation /// 0045766 // positive regulation of angiogenesis // inferred from sequence or structural similarity /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048266 // behavioral response to pain // inferred from electronic annotation /// 0048666 // neuron development // inferred from electronic annotation /// 0048935 // peripheral nervous system neuron development // traceable author statement /// 0060216 // definitive hemopoiesis // inferred from electronic annotation /// 0071336 // regulation of hair follicle cell proliferation // inferred from electronic annotation /// 0071425 // hemopoietic stem cell proliferation // traceable author statement","0005604 // basement membrane // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0000975 // regulatory region DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003714 // transcription corepressor activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // non-traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from direct assay /// 0070491 // repressing transcription factor binding // inferred from electronic annotation","chr21:36206706-36259394 (-) // 69.17 // q22.12"]
["11746755_s_at",-0.016567469,0.026524544,-0.050067425,0.016567469,0.038349867,-0.057394743,0.9127191,0.7482768,-1.0087329,-0.012544238,1.0087329,"down","SLC28A3",64078.0,"0001895 // retina homeostasis // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0015860 // purine nucleoside transport // inferred from electronic annotation /// 0015864 // pyrimidine nucleoside transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0001882 // nucleoside binding // inferred from electronic annotation /// 0005415 // nucleoside:sodium symporter activity // inferred from electronic annotation /// 0015389 // pyrimidine- and adenine-specific:sodium symporter activity // inferred from electronic annotation /// 0015390 // purine-specific nucleoside:sodium symporter activity // inferred from electronic annotation","chr9:86892948-86955672 (-) // 98.76 // q21.32"]
["11746934_a_at",-0.06879473,0.028083801,0.031556606,0.016607285,-0.016607285,-0.08540058,0.84679526,0.59878665,1.0177727,0.025415363,1.0177727,"up","SPIRE1",56907.0,"0006810 // transport // inferred from electronic annotation /// 0048193 // Golgi vesicle transport // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation","chr18:12448630-12453113 (-) // 92.65 // p11.21"]
["11757250_x_at",-0.047753096,-0.05940461,0.07514572,-0.010125399,0.029418468,0.010125399,0.87892985,0.66950047,-1.0142946,-0.020476775,1.0142946,"down","INGX",27160.0,"","","","chrX:70711376-70712604 (-) // 75.0 // q13.1"]
["11753422_a_at",0.049469948,0.10832119,0.0768137,-0.049469948,-0.055184364,-0.16392231,0.23073821,0.014882719,1.1232874,0.16772714,1.1232874,"up","BNIP3L",665.0,"0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from direct assay /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0008634 // negative regulation of survival gene product expression // inferred from direct assay /// 0035694 // mitochondrial protein catabolic process // inferred from mutant phenotype /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0051607 // defense response to virus // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from direct assay /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005740 // mitochondrial envelope // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from mutant phenotype /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031224 // intrinsic to membrane // traceable author statement","0005515 // protein binding // inferred from physical interaction /// 0005521 // lamin binding // inferred from direct assay /// 0005521 // lamin binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from direct assay","chr8:26240606-26268126 (+) // 99.78 // p21.2"]
["11760915_a_at",0.19789481,-0.004749298,-0.34059215,0.004749298,-0.18434858,0.051138163,0.99211407,0.9725328,-1.0043962,-0.0063284757,1.0043962,"down","CYP3A5",1577.0,"0006805 // xenobiotic metabolic process // traceable author statement /// 0008202 // steroid metabolic process // traceable author statement /// 0009822 // alkaloid catabolic process // inferred from direct assay /// 0042737 // drug catabolic process // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0070989 // oxidative demethylation // inferred from direct assay","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005792 // microsome // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0004497 // monooxygenase activity // inferred from sequence or structural similarity /// 0004497 // monooxygenase activity // inferred from electronic annotation /// 0004497 // monooxygenase activity // traceable author statement /// 0005506 // iron ion binding // inferred from electronic annotation /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from direct assay /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016705 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen // inferred from electronic annotation /// 0016712 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen // inferred from electronic annotation /// 0019825 // oxygen binding // traceable author statement /// 0020037 // heme binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070330 // aromatase activity // inferred from electronic annotation","chr7:99270202-99277649 (-) // 39.33 // q22.1"]
["11745703_a_at",0.17030716,0.0138754845,-0.040429115,0.11068392,-0.28658915,-0.0138754845,0.7703701,0.45097324,1.0801098,0.111178026,1.0801098,"up","RCAN3",11123.0,"0009653 // anatomical structure morphogenesis // traceable author statement /// 0019722 // calcium-mediated signaling // inferred from electronic annotation","","0000166 // nucleotide binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0031013 // troponin I binding // inferred from physical interaction","chr1:24840836-24861847 (+) // 100.0 // p36.11"]
["11734841_a_at",-0.009309769,0.0048532486,0.08910465,-0.020579338,0.0788393,-0.0048532486,0.9412612,0.82271504,1.0072445,0.010413881,1.0072445,"up","RAD51",5888.0,"0000724 // double-strand break repair via homologous recombination // inferred from direct assay /// 0000724 // double-strand break repair via homologous recombination // inferred from electronic annotation /// 0000724 // double-strand break repair via homologous recombination // traceable author statement /// 0000730 // DNA recombinase assembly // traceable author statement /// 0006259 // DNA metabolic process // inferred from electronic annotation /// 0006268 // DNA unwinding involved in replication // inferred from direct assay /// 0006281 // DNA repair // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006302 // double-strand break repair // traceable author statement /// 0006310 // DNA recombination // traceable author statement /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006312 // mitotic recombination // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007126 // meiosis // inferred from electronic annotation /// 0007126 // meiosis // inferred from sequence or structural similarity /// 0007131 // reciprocal meiotic recombination // traceable author statement /// 0051106 // positive regulation of DNA ligation // inferred from direct assay /// 0051260 // protein homooligomerization // inferred from physical interaction","0000793 // condensed chromosome // inferred from sequence or structural similarity /// 0000794 // condensed nuclear chromosome // inferred from sequence or structural similarity /// 0000800 // lateral element // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // inferred from electronic annotation /// 0016605 // PML body // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003684 // damaged DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from direct assay /// 0003697 // single-stranded DNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0008094 // DNA-dependent ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0043142 // single-stranded DNA-dependent ATPase activity // inferred from direct assay","chr15:40987357-41024504 (+) // 87.94 // q15.1"]
["11716306_a_at",9.0789795E-4,-9.0789795E-4,-0.020061493,0.038711548,-0.0027122498,0.006205559,0.6055837,0.21932064,-1.0144906,-0.020755503,1.0144906,"down","ATXN10",25814.0,"0007399 // nervous system development // inferred from mutant phenotype /// 0008219 // cell death // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from direct assay","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0030425 // dendrite // inferred from direct assay /// 0043025 // neuronal cell body // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from electronic annotation","chr22:46067682-46241189 (+) // 93.6 // q13.31"]
["11754933_s_at",-0.009273529,-0.007973671,0.007973671,0.018195152,0.011861801,-0.04287243,0.9868822,0.9561174,1.0008187,0.0011806935,1.0008187,"up","TSC22D2",9819.0,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006970 // response to osmotic stress // inferred from electronic annotation","","0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation","chr3:150128994-150177903 (+) // 96.11 // q25.1"]
["11758650_s_at",-0.0023536682,-0.014509201,-0.02646923,0.0074472427,0.0023536682,0.003991127,0.37440526,0.055590406,-1.013286,-0.019041425,1.013286,"down","SNRPC",6631.0,"0000387 // spliceosomal snRNP assembly // inferred from direct assay /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005685 // U1 snRNP // inferred from direct assay /// 0005685 // U1 snRNP // inferred from electronic annotation /// 0015030 // Cajal body // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003727 // single-stranded RNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0030619 // U1 snRNA binding // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:34741238-34741551 (+) // 100.0 // p21.31"]
["11745820_s_at",-0.015767097,0.0094099045,-0.0094099045,0.037880898,-0.026669502,0.04164982,0.72881436,0.38407522,-1.0159829,-0.022876073,1.0159829,"down","PLAGL1",5325.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006917 // induction of apoptosis // traceable author statement /// 0007050 // cell cycle arrest // traceable author statement /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:144261436-144329543 (-) // 94.31 // q24.2"]
["11750538_x_at",-0.02195263,-0.011463165,0.0010690689,0.018476486,-0.0010690689,0.0045547485,0.47484955,0.10977105,-1.0126271,-0.018103035,1.0126271,"down","TXN",7295.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006662 // glycerol ether metabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006928 // cellular component movement // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0009314 // response to radiation // inferred from direct assay /// 0015949 // nucleobase-containing small molecule interconversion // traceable author statement /// 0022900 // electron transport chain // inferred from electronic annotation /// 0033158 // regulation of protein import into nucleus, translocation // inferred from direct assay /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0043388 // positive regulation of DNA binding // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045454 // cell redox homeostasis // inferred from electronic annotation /// 0046826 // negative regulation of protein export from nucleus // inferred from electronic annotation /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from direct assay","0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0015035 // protein disulfide oxidoreductase activity // inferred from electronic annotation /// 0015037 // peptide disulfide oxidoreductase activity // inferred from electronic annotation","chr9:113006307-113018763 (-) // 90.28 // q31.3"]
["11724469_at",-0.01906395,-0.04437065,-0.010181427,0.071154594,0.010181427,0.045437813,0.30174538,0.030786186,-1.0473884,-0.06679658,1.0473884,"down","SLU7",10569.0,"0000375 // RNA splicing, via transesterification reactions // inferred from direct assay /// 0000380 // alternative nuclear mRNA splicing, via spliceosome // inferred from direct assay /// 0000389 // nuclear mRNA 3'-splice site recognition // inferred from direct assay /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from direct assay /// 0008380 // RNA splicing // inferred from electronic annotation /// 0033554 // cellular response to stress // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005681 // spliceosomal complex // inferred from direct assay /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from direct assay /// 0030532 // small nuclear ribonucleoprotein complex // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay","0000386 // second spliceosomal transesterification activity // inferred from direct assay /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0030628 // pre-mRNA 3'-splice site binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr5:159828653-159846407 (-) // 86.7 // q33.3"]
["11738586_at",-0.036360502,0.07120824,0.036360264,-0.036360502,-0.048516273,0.2013166,0.95815206,0.87124336,-1.0105056,-0.015077256,1.0105056,"down","HGC6.3",1.00128124E8,"","","","chr6:168376603-168377619 (-) // 85.77 // q27"]
["11715422_a_at",0.03195095,0.06367302,-0.1491766,0.026065826,-0.112075806,-0.026065826,0.93804884,0.8138381,1.0136136,0.01950776,1.0136136,"up","BCAP31",10134.0,"0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006921 // cellular component disassembly involved in apoptotic process // traceable author statement /// 0006955 // immune response // non-traceable author statement /// 0006955 // immune response // inferred from electronic annotation /// 0007204 // elevation of cytosolic calcium ion concentration // inferred from mutant phenotype /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0032471 // reduction of endoplasmic reticulum calcium ion concentration // inferred from mutant phenotype /// 0035584 // calcium-mediated signaling using intracellular calcium source // inferred from mutant phenotype /// 0043280 // positive regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from mutant phenotype /// 0051561 // elevation of mitochondrial calcium ion concentration // inferred from mutant phenotype /// 2001244 // positive regulation of intrinsic apoptotic signaling pathway // inferred from mutant phenotype","0000139 // Golgi membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005811 // lipid particle // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0033116 // endoplasmic reticulum-Golgi intermediate compartment membrane // inferred from electronic annotation /// 0071556 // integral to lumenal side of endoplasmic reticulum membrane // traceable author statement","0004872 // receptor activity // inferred from electronic annotation /// 0005102 // receptor binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chrX:152965951-152989802 (-) // 56.42 // q28"]
["11727584_a_at",-0.013100147,-0.038760662,0.10937214,0.01309967,-0.06853485,0.063653946,0.93202794,0.79699296,1.0114541,0.016430859,1.0114541,"up","SPIN3",169981.0,"0007276 // gamete generation // inferred from electronic annotation","","","chrX:57017263-57021987 (-) // 90.02 // p11.21"]
["11759521_a_at",-0.0026621819,0.07537031,0.06177473,-0.097839355,0.0026621819,-0.11559963,0.3826634,0.059024446,1.08304,0.115086526,1.08304,"up","SBNO1",55206.0,"","","","chr12:123778194-123849756 (-) // 96.01 // q24.31"]
["11743383_at",0.030494213,-0.0047068596,-0.00839901,0.0047068596,0.06721878,-0.057686806,0.99370867,0.9793524,1.000728,0.0010499159,1.000728,"up","PRPF40A",55660.0,"0006397 // mRNA processing // inferred from electronic annotation /// 0007010 // cytoskeleton organization // inferred from mutant phenotype /// 0007049 // cell cycle // inferred from electronic annotation /// 0008360 // regulation of cell shape // inferred from mutant phenotype /// 0008380 // RNA splicing // inferred from electronic annotation /// 0016477 // cell migration // inferred from mutant phenotype /// 0032465 // regulation of cytokinesis // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0016363 // nuclear matrix // inferred from direct assay /// 0016363 // nuclear matrix // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr2:153508103-153574511 (-) // 95.18 // q23.3"]
["11746460_a_at",-0.021313667,-0.015226841,0.058728218,0.008672714,0.021314144,-0.008672714,0.9974707,0.9919578,1.0002018,2.9113726E-4,1.0002018,"up","ZNF711",7552.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chrX:84498996-84527248 (+) // 98.19 // q21.1"]
["11759209_at",-0.0690968,0.07766199,-0.025845528,-0.022122622,0.022122622,0.072690964,0.8432671,0.5911604,-1.0210054,-0.029990485,1.0210054,"down","AKD1",221264.0,"0006139 // nucleobase-containing compound metabolic process // inferred from electronic annotation","","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0019205 // nucleobase-containing compound kinase activity // inferred from electronic annotation","chr6:109870886-110012415 (-) // 89.82 // q21"]
["11760920_x_at",-0.026473522,0.038873196,0.018065453,-0.021352291,0.03798008,-0.018065453,0.8991533,0.71617347,1.0073984,0.0106342975,1.0073984,"up","PHKG2",5261.0,"0005975 // carbohydrate metabolic process // traceable author statement /// 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0005977 // glycogen metabolic process // traceable author statement /// 0005977 // glycogen metabolic process // inferred from electronic annotation /// 0005978 // glycogen biosynthetic process // inferred from electronic annotation /// 0005980 // glycogen catabolic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006091 // generation of precursor metabolites and energy // traceable author statement /// 0006468 // protein phosphorylation // non-traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0045819 // positive regulation of glycogen catabolic process // traceable author statement","0005625 // soluble fraction // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005964 // phosphorylase kinase complex // traceable author statement /// 0005964 // phosphorylase kinase complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // non-traceable author statement /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004689 // phosphorylase kinase activity // traceable author statement /// 0004689 // phosphorylase kinase activity // inferred from electronic annotation /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005524 // ATP binding // non-traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from electronic annotation /// 0050321 // tau-protein kinase activity // traceable author statement /// 0050321 // tau-protein kinase activity // inferred from electronic annotation","chr16:30759590-30771712 (+) // 94.93 // p11.2"]
["11742899_a_at",0.0035171509,-0.013673782,-0.009384155,0.005680084,-0.0035171509,0.054257393,0.62889016,0.24617049,-1.0177057,-0.025320394,1.0177057,"down","CGGBP1",8545.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005730 // nucleolus // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // traceable author statement","chr3:88101094-88108218 (-) // 96.05 // p11.1"]
["11762554_at",0.2497623,0.1370635,-0.26021743,0.36808777,-0.1370635,-0.2538886,0.95041037,0.84917724,1.0351388,0.049824294,1.0351388,"up","CPAMD8",27151.0,"0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0004866 // endopeptidase inhibitor activity // inferred from electronic annotation /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation","chr19:17068361-17137625 (-) // 93.17 // p13.11"]
["11717906_s_at",0.058110237,-0.022245407,-0.044668198,0.022245407,-0.04565239,0.022457123,0.98502016,0.9491395,-1.0018162,-0.0026177792,1.0018162,"down","STAU1",6780.0,"0008298 // intracellular mRNA localization // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005791 // rough endoplasmic reticulum // inferred from electronic annotation /// 0005791 // rough endoplasmic reticulum // traceable author statement /// 0005875 // microtubule associated complex // traceable author statement /// 0010494 // cytoplasmic stress granule // inferred from sequence or structural similarity /// 0010494 // cytoplasmic stress granule // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0003725 // double-stranded RNA binding // inferred from electronic annotation /// 0003725 // double-stranded RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr20:47729875-47804907 (-) // 95.73 // q13.13"]
["11749926_a_at",0.024083138,0.011384964,-0.011384726,0.0597744,-0.14513636,-0.0809412,0.7137124,0.359687,1.0449705,0.06346223,1.0449705,"up","C4A /// C4B /// LOC100293534","100293534 /// 720 /// 721","0006954 // inflammatory response // inferred from electronic annotation /// 0006956 // complement activation // inferred from electronic annotation /// 0006956 // complement activation // traceable author statement /// 0006958 // complement activation, classical pathway // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // inferred from electronic annotation /// 0030449 // regulation of complement activation // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement","0004866 // endopeptidase inhibitor activity // inferred from electronic annotation","chr6:31949851-31952468 (+) // 97.88 // p21.33 /// chr6:31982589-31985206 (+) // 97.88 // p21.33"]
["11735951_at",0.053058147,-0.0985837,-0.044217587,0.044218063,0.12960339,-0.049773216,0.70994854,0.35502458,-1.0506366,-0.07126381,1.0506366,"down","SSTR4",6754.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007187 // G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger // traceable author statement /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0038170 // somatostatin signaling pathway // traceable author statement /// 0038170 // somatostatin signaling pathway // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004994 // somatostatin receptor activity // inferred from electronic annotation /// 0004994 // somatostatin receptor activity // traceable author statement","chr20:23016056-23017314 (+) // 97.54 // p11.21"]
["11728198_at",-0.03372574,0.05856228,-0.1087141,0.11414528,-0.0047798157,0.0047798157,0.70325494,0.34431657,-1.0468158,-0.06600754,1.0468158,"down","ALG1",56052.0,"0006486 // protein glycosylation // traceable author statement /// 0006486 // protein glycosylation // inferred from electronic annotation /// 0006488 // dolichol-linked oligosaccharide biosynthetic process // traceable author statement /// 0009103 // lipopolysaccharide biosynthetic process // traceable author statement /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005783 // endoplasmic reticulum // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000030 // mannosyltransferase activity // traceable author statement /// 0004578 // chitobiosyldiphosphodolichol beta-mannosyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation","chr16:5121809-5137378 (+) // 71.93 // p13.3"]
["11734897_a_at",-0.24790025,0.097610235,-0.0108988285,0.01089859,0.0683105,-0.033356905,0.824644,0.55113167,-1.0489993,-0.06901373,1.0489993,"down","MATN1",4146.0,"0002062 // chondrocyte differentiation // inferred from electronic annotation /// 0003429 // growth plate cartilage chondrocyte morphogenesis // inferred from electronic annotation /// 0006461 // protein complex assembly // traceable author statement /// 0030500 // regulation of bone mineralization // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // traceable author statement","0005201 // extracellular matrix structural constituent // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr1:31184125-31196434 (-) // 92.14 // p35.2"]
["11719916_at",-0.061334133,-0.012494564,0.022720814,-0.005897045,0.005897045,0.09207106,0.6647065,0.2917738,-1.0336347,-0.047726355,1.0336347,"down","IL1B",3553.0,"0000165 // MAPK cascade // inferred from mutant phenotype /// 0000187 // activation of MAPK activity // inferred from direct assay /// 0001660 // fever generation // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from direct assay /// 0001934 // positive regulation of protein phosphorylation // non-traceable author statement /// 0002439 // chronic inflammatory response to antigenic stimulus // inferred from electronic annotation /// 0002711 // positive regulation of T cell mediated immunity // inferred by curator /// 0006915 // apoptotic process // traceable author statement /// 0006916 // anti-apoptosis // inferred from direct assay /// 0006954 // inflammatory response // inferred from direct assay /// 0006954 // inflammatory response // non-traceable author statement /// 0006954 // inflammatory response // inferred from electronic annotation /// 0006955 // immune response // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007204 // elevation of cytosolic calcium ion concentration // inferred from electronic annotation /// 0007267 // cell-cell signaling // traceable author statement /// 0007566 // embryo implantation // traceable author statement /// 0007568 // aging // inferred from electronic annotation /// 0007584 // response to nutrient // inferred from electronic annotation /// 0007611 // learning or memory // inferred from electronic annotation /// 0007613 // memory // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0009408 // response to heat // inferred from electronic annotation /// 0010193 // response to ozone // inferred from electronic annotation /// 0010243 // response to organic nitrogen // inferred from electronic annotation /// 0010332 // response to gamma radiation // inferred from electronic annotation /// 0010575 // positive regulation vascular endothelial growth factor production // inferred from direct assay /// 0010575 // positive regulation vascular endothelial growth factor production // inferred from sequence or structural similarity /// 0010575 // positive regulation vascular endothelial growth factor production // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0010829 // negative regulation of glucose transport // inferred from sequence or structural similarity /// 0010829 // negative regulation of glucose transport // inferred from electronic annotation /// 0014050 // negative regulation of glutamate secretion // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0014805 // smooth muscle adaptation // non-traceable author statement /// 0019221 // cytokine-mediated signaling pathway // inferred from direct assay /// 0019221 // cytokine-mediated signaling pathway // inferred from electronic annotation /// 0030213 // hyaluronan biosynthetic process // inferred from direct assay /// 0030593 // neutrophil chemotaxis // inferred from electronic annotation /// 0030728 // ovulation // inferred from electronic annotation /// 0030730 // sequestering of triglyceride // inferred from direct assay /// 0030949 // positive regulation of vascular endothelial growth factor receptor signaling pathway // inferred by curator /// 0031622 // positive regulation of fever generation // inferred from sequence or structural similarity /// 0031622 // positive regulation of fever generation // inferred from electronic annotation /// 0031663 // lipopolysaccharide-mediated signaling pathway // inferred from direct assay /// 0032308 // positive regulation of prostaglandin secretion // inferred from sequence or structural similarity /// 0032308 // positive regulation of prostaglandin secretion // inferred from electronic annotation /// 0032355 // response to estradiol stimulus // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0032725 // positive regulation of granulocyte macrophage colony-stimulating factor production // inferred from direct assay /// 0032729 // positive regulation of interferon-gamma production // inferred from direct assay /// 0032755 // positive regulation of interleukin-6 production // traceable author statement /// 0032755 // positive regulation of interleukin-6 production // inferred from electronic annotation /// 0032755 // positive regulation of interleukin-6 production // inferred from direct assay /// 0032757 // positive regulation of interleukin-8 production // inferred from direct assay /// 0032874 // positive regulation of stress-activated MAPK cascade // inferred from electronic annotation /// 0033129 // positive regulation of histone phosphorylation // non-traceable author statement /// 0033198 // response to ATP // inferred from electronic annotation /// 0033280 // response to vitamin D // inferred from electronic annotation /// 0033591 // response to L-ascorbic acid // inferred from electronic annotation /// 0034116 // positive regulation of heterotypic cell-cell adhesion // inferred from direct assay /// 0034116 // positive regulation of heterotypic cell-cell adhesion // non-traceable author statement /// 0035066 // positive regulation of histone acetylation // non-traceable author statement /// 0035176 // social behavior // inferred from electronic annotation /// 0035505 // positive regulation of myosin light chain kinase activity // inferred from direct assay /// 0035690 // cellular response to drug // inferred from direct assay /// 0042060 // wound healing // inferred from electronic annotation /// 0042102 // positive regulation of T cell proliferation // inferred from direct assay /// 0042221 // response to chemical stimulus // inferred from electronic annotation /// 0042346 // positive regulation of NF-kappaB import into nucleus // inferred from direct assay /// 0042493 // response to drug // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043122 // regulation of I-kappaB kinase/NF-kappaB cascade // inferred from direct assay /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from electronic annotation /// 0043278 // response to morphine // inferred from electronic annotation /// 0043407 // negative regulation of MAP kinase activity // inferred from sequence or structural similarity /// 0043407 // negative regulation of MAP kinase activity // inferred from electronic annotation /// 0043491 // protein kinase B signaling cascade // inferred from mutant phenotype /// 0043507 // positive regulation of JUN kinase activity // inferred from electronic annotation /// 0045080 // positive regulation of chemokine biosynthetic process // inferred from electronic annotation /// 0045086 // positive regulation of interleukin-2 biosynthetic process // inferred from mutant phenotype /// 0045410 // positive regulation of interleukin-6 biosynthetic process // inferred from electronic annotation /// 0045429 // positive regulation of nitric oxide biosynthetic process // inferred from direct assay /// 0045766 // positive regulation of angiogenesis // inferred from sequence or structural similarity /// 0045766 // positive regulation of angiogenesis // inferred from electronic annotation /// 0045833 // negative regulation of lipid metabolic process // inferred from sequence or structural similarity /// 0045833 // negative regulation of lipid metabolic process // inferred from electronic annotation /// 0045840 // positive regulation of mitosis // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046330 // positive regulation of JNK cascade // inferred from electronic annotation /// 0046627 // negative regulation of insulin receptor signaling pathway // inferred from sequence or structural similarity /// 0046627 // negative regulation of insulin receptor signaling pathway // inferred from electronic annotation /// 0046827 // positive regulation of protein export from nucleus // non-traceable author statement /// 0050796 // regulation of insulin secretion // inferred from direct assay /// 0050900 // leukocyte migration // inferred from electronic annotation /// 0050995 // negative regulation of lipid catabolic process // inferred from direct assay /// 0050996 // positive regulation of lipid catabolic process // inferred from sequence or structural similarity /// 0050996 // positive regulation of lipid catabolic process // inferred from electronic annotation /// 0051044 // positive regulation of membrane protein ectodomain proteolysis // inferred from direct assay /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation /// 0051781 // positive regulation of cell division // inferred from electronic annotation /// 0060355 // positive regulation of cell adhesion molecule production // non-traceable author statement /// 0060559 // positive regulation of calcidiol 1-monooxygenase activity // inferred from direct assay /// 0070164 // negative regulation of adiponectin secretion // inferred from sequence or structural similarity /// 0070164 // negative regulation of adiponectin secretion // inferred from electronic annotation /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from electronic annotation /// 0070487 // monocyte aggregation // inferred from direct assay /// 0071260 // cellular response to mechanical stimulus // inferred from expression pattern /// 0071310 // cellular response to organic substance // inferred from direct assay /// 0071407 // cellular response to organic cyclic compound // inferred from direct assay /// 0071639 // positive regulation of monocyte chemotactic protein-1 production // inferred from direct assay","0005576 // extracellular region // inferred from direct assay /// 0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from mutant phenotype /// 0005615 // extracellular space // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0030141 // secretory granule // inferred from electronic annotation /// 0031982 // vesicle // inferred from electronic annotation","0005125 // cytokine activity // inferred from direct assay /// 0005125 // cytokine activity // inferred from mutant phenotype /// 0005125 // cytokine activity // inferred from electronic annotation /// 0005149 // interleukin-1 receptor binding // non-traceable author statement /// 0005149 // interleukin-1 receptor binding // inferred from electronic annotation /// 0008083 // growth factor activity // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from physical interaction","chr2:113587327-113594358 (-) // 94.91 // q13"]
["11749120_a_at",-0.061642647,0.112897396,0.061642885,0.06250739,-0.23272943,-0.068550825,0.67509997,0.30567083,1.0846454,0.11722345,1.0846454,"up","SCUBE2",57758.0,"","0005576 // extracellular region // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr11:9042121-9113093 (-) // 96.33 // p15.4"]
["11736867_x_at",-6.2322617E-4,0.11788082,-0.041776657,-0.14330864,0.009346962,6.2322617E-4,0.7199104,0.3692041,1.0494304,0.069606446,1.0494304,"up","MMP16",4325.0,"0006508 // proteolysis // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0030574 // collagen catabolic process // inferred from electronic annotation /// 0043085 // positive regulation of catalytic activity // traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005796 // Golgi lumen // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from electronic annotation","0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0004222 // metalloendopeptidase activity // traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0008047 // enzyme activator activity // traceable author statement /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008270 // zinc ion binding // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:89049461-89339717 (-) // 98.65 // q21.3"]
["11748194_a_at",0.0,0.25764108,0.12182188,0.0,-0.030806303,-0.14089274,0.45676315,0.09901488,1.1358093,0.18372063,1.1358093,"up","POLL",27343.0,"0006260 // DNA replication // non-traceable author statement /// 0006260 // DNA replication // inferred from electronic annotation /// 0006281 // DNA repair // inferred from electronic annotation /// 0006289 // nucleotide-excision repair // inferred from direct assay /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0016446 // somatic hypermutation of immunoglobulin genes // non-traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // non-traceable author statement /// 0003824 // catalytic activity // inferred from electronic annotation /// 0003887 // DNA-directed DNA polymerase activity // inferred from electronic annotation /// 0003887 // DNA-directed DNA polymerase activity // non-traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016779 // nucleotidyltransferase activity // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr10:103342749-103347916 (-) // 92.49 // q24.32"]
["11723018_at",-0.014000893,0.014000893,0.047593117,0.06434345,-0.15612125,-0.118694305,0.6618314,0.2888369,1.0614392,0.08602168,1.0614392,"up","LCMT2",9836.0,"0008033 // tRNA processing // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation","","0005515 // protein binding // inferred from physical interaction /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr15:43619973-43622891 (-) // 87.55 // q15.3"]
["11751273_a_at",-0.06272483,0.1679771,-0.10590935,0.06272459,-0.098210335,0.18934298,0.88684034,0.6873649,-1.0363452,-0.051504694,1.0363452,"down","GPR34",2857.0,"0006886 // intracellular protein transport // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0035589 // G-protein coupled purinergic nucleotide receptor signaling pathway // inferred from electronic annotation","0005624 // membrane fraction // inferred from electronic annotation /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0008022 // protein C-terminus binding // inferred from electronic annotation /// 0030165 // PDZ domain binding // inferred from electronic annotation /// 0032403 // protein complex binding // inferred from electronic annotation /// 0045028 // G-protein coupled purinergic nucleotide receptor activity // inferred from electronic annotation","chrX:41548250-41556032 (+) // 90.89 // p11.4"]
["11763524_a_at",-0.14580107,-0.120321274,0.120321274,0.188025,-0.3334236,0.13778448,0.939099,0.8170468,-1.0324432,-0.046062365,1.0324432,"down","PPARA",5465.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006629 // lipid metabolic process // traceable author statement /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // traceable author statement /// 0007507 // heart development // inferred from electronic annotation /// 0008544 // epidermis development // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0010745 // negative regulation of macrophage derived foam cell differentiation // inferred by curator /// 0010745 // negative regulation of macrophage derived foam cell differentiation // inferred from direct assay /// 0010871 // negative regulation of receptor biosynthetic process // inferred from direct assay /// 0010887 // negative regulation of cholesterol storage // inferred from direct assay /// 0010891 // negative regulation of sequestering of triglyceride // inferred from direct assay /// 0015908 // fatty acid transport // traceable author statement /// 0019217 // regulation of fatty acid metabolic process // inferred from electronic annotation /// 0030522 // intracellular receptor mediated signaling pathway // inferred from direct assay /// 0030522 // intracellular receptor mediated signaling pathway // inferred from electronic annotation /// 0032000 // positive regulation of fatty acid beta-oxidation // traceable author statement /// 0032099 // negative regulation of appetite // inferred from sequence or structural similarity /// 0032099 // negative regulation of appetite // inferred from electronic annotation /// 0032868 // response to insulin stimulus // inferred from electronic annotation /// 0042060 // wound healing // inferred from electronic annotation /// 0042157 // lipoprotein metabolic process // inferred from electronic annotation /// 0043401 // steroid hormone mediated signaling pathway // inferred from direct assay /// 0043401 // steroid hormone mediated signaling pathway // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045776 // negative regulation of blood pressure // inferred from electronic annotation /// 0045820 // negative regulation of glycolysis // inferred by curator /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046321 // positive regulation of fatty acid oxidation // inferred from sequence or structural similarity /// 0046321 // positive regulation of fatty acid oxidation // inferred from electronic annotation /// 0072363 // regulation of glycolysis by positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0072366 // regulation of cellular ketone metabolic process by positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0072369 // regulation of lipid transport by positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0001103 // RNA polymerase II repressing transcription factor binding // inferred from physical interaction /// 0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from sequence or structural similarity /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003707 // steroid hormone receptor activity // inferred from direct assay /// 0003707 // steroid hormone receptor activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004879 // ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from direct assay /// 0004879 // ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008144 // drug binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from direct assay /// 0008289 // lipid binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0031624 // ubiquitin conjugating enzyme binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from sequence or structural similarity /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070215 // MDM2 binding // inferred from electronic annotation","chr22:46567042-46611227 (+) // 58.32 // q13.31"]
["11759314_at",-0.018697739,0.08163738,-0.058386803,-0.2552271,0.045215607,0.018697739,0.8320595,0.56663907,1.0462945,0.065288916,1.0462945,"up","CRHR2",1395.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007188 // adenylate cyclase-modulating G-protein coupled receptor signaling pathway // traceable author statement /// 0071376 // cellular response to corticotropin-releasing hormone stimulus // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0015056 // corticotrophin-releasing factor receptor activity // traceable author statement","chr7:30691830-30722314 (-) // 96.93 // p14.3"]
["11746308_a_at",0.087982655,0.005133629,-0.16443491,-0.092499256,-0.0051333904,0.0064680576,0.98170614,0.93851864,1.0045959,0.0066152574,1.0045959,"up","LINC00494",284749.0,"","","","chr20:46993631-46999381 (+) // 68.2 // q13.13"]
["11756679_a_at",-0.0012636185,0.0012636185,0.09256983,-0.07144499,0.110434055,-0.0408597,0.8697014,0.649278,1.0220602,0.03148011,1.0220602,"up","ALDH3A2",224.0,"0006081 // cellular aldehyde metabolic process // inferred from direct assay /// 0006081 // cellular aldehyde metabolic process // non-traceable author statement /// 0006081 // cellular aldehyde metabolic process // inferred from electronic annotation /// 0007417 // central nervous system development // inferred from mutant phenotype /// 0007422 // peripheral nervous system development // inferred from mutant phenotype /// 0008152 // metabolic process // inferred from electronic annotation /// 0008544 // epidermis development // inferred from mutant phenotype /// 0033306 // phytol metabolic process // inferred from mutant phenotype /// 0055114 // oxidation-reduction process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004029 // aldehyde dehydrogenase (NAD) activity // inferred from direct assay /// 0004029 // aldehyde dehydrogenase (NAD) activity // inferred from mutant phenotype /// 0004029 // aldehyde dehydrogenase (NAD) activity // inferred from electronic annotation /// 0004030 // aldehyde dehydrogenase [NAD(P)+] activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016620 // oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor // inferred from electronic annotation","chr17:19559457-19579055 (+) // 89.71 // p11.2"]
["11763695_a_at",-0.01615429,-0.044490814,-0.044490814,0.13080168,0.23373508,0.01615429,0.39280275,0.06341224,-1.1187924,-0.16194238,1.1187924,"down","ABTB1",80325.0,"0006412 // translation // inferred from electronic annotation /// 0006414 // translational elongation // inferred from electronic annotation","0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay","0003746 // translation elongation factor activity // inferred from electronic annotation","chr3:127391808-127399766 (+) // 97.99 // q21.3"]
["11741065_a_at",0.056662083,0.079138756,-0.14046669,-0.018475056,-0.08959484,0.018475056,0.9049791,0.7305252,1.0198165,0.02830961,1.0198165,"up","EPHX1",2052.0,"0001889 // liver development // inferred from electronic annotation /// 0006725 // cellular aromatic compound metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009636 // response to toxin // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0019439 // aromatic compound catabolic process // inferred from electronic annotation /// 0071310 // cellular response to organic substance // inferred from electronic annotation /// 0071385 // cellular response to glucocorticoid stimulus // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004301 // epoxide hydrolase activity // inferred from electronic annotation /// 0004301 // epoxide hydrolase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from electronic annotation /// 0033961 // cis-stilbene-oxide hydrolase activity // inferred from electronic annotation","chr1:225997793-226033260 (+) // 98.11 // q42.12"]
["11742427_s_at",-0.108400345,-0.11199093,0.23620462,0.27196884,0.04461336,-0.04461336,0.8465605,0.5973997,-1.0609709,-0.08538509,1.0609709,"down","STRC",161497.0,"0007605 // sensory perception of sound // inferred from electronic annotation /// 0050910 // detection of mechanical stimulus involved in sensory perception of sound // inferred from electronic annotation /// 0060088 // auditory receptor cell stereocilium organization // inferred from electronic annotation /// 0060088 // auditory receptor cell stereocilium organization // inferred from sequence or structural similarity","0009986 // cell surface // inferred from electronic annotation /// 0032426 // stereocilium bundle tip // inferred from electronic annotation /// 0032426 // stereocilium bundle tip // inferred from sequence or structural similarity /// 0060091 // kinocilium // inferred from sequence or structural similarity","","chr15:43891760-43910998 (-) // 98.84 // q15.3 /// chr15:43991576-44010460 (-) // 98.4 // q15.3"]
["11747511_x_at",-0.10938597,-0.009092808,0.07466221,0.009092808,0.056046963,-0.033892155,0.8888502,0.6942874,-1.0174948,-0.025021417,1.0174948,"down","HLA-DQB1",3119.0,"0002381 // immunoglobulin production involved in immunoglobulin mediated immune response // inferred from direct assay /// 0002455 // humoral immune response mediated by circulating immunoglobulin // inferred from direct assay /// 0002504 // antigen processing and presentation of peptide or polysaccharide antigen via MHC class II // inferred from electronic annotation /// 0006955 // immune response // inferred from electronic annotation /// 0006955 // immune response // non-traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0019882 // antigen processing and presentation // inferred from electronic annotation /// 0031295 // T cell costimulation // traceable author statement /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement","0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0042613 // MHC class II protein complex // inferred from electronic annotation","0032395 // MHC class II receptor activity // non-traceable author statement","chr6:32628844-32634472 (-) // 88.93 // p21.32"]
["11736145_a_at",-0.09898901,-0.10392523,0.019882679,0.017914772,-0.012688637,0.012688637,0.56784993,0.18232548,-1.0475231,-0.06698211,1.0475231,"down","SPATA20",64847.0,"0006013 // mannose metabolic process // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004476 // mannose-6-phosphate isomerase activity // inferred from electronic annotation","chr17:48624449-48633211 (+) // 96.91 // q21.33"]
["11716111_x_at",0.051594257,0.021080494,-0.03625536,-0.021080494,0.13320184,-0.06956196,0.9931564,0.97686404,-1.0014197,-0.002046689,1.0014197,"down","PIGR",5284.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030133 // transport vesicle // inferred from electronic annotation /// 0055038 // recycling endosome membrane // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:207101863-207119811 (-) // 79.88 // q32.1"]
["11741641_a_at",1.8835068E-4,0.069512844,-0.08460426,-0.04417038,-1.8882751E-4,0.122523785,0.8780176,0.6668988,-1.021736,-0.031022511,1.021736,"down","ZFX",7543.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0003713 // transcription coactivator activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chrX:24167152-24232628 (+) // 91.12 // p22.11"]
["11752497_a_at",0.023760796,-0.06624699,0.021953583,-0.13376617,0.00867033,-0.00867033,0.80962247,0.52170086,1.0265077,0.0377445,1.0265077,"up","MEF2D",4209.0,"0001649 // osteoblast differentiation // inferred from electronic annotation /// 0001958 // endochondral ossification // inferred from electronic annotation /// 0002062 // chondrocyte differentiation // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // inferred from direct assay /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007512 // adult heart development // inferred from expression pattern /// 0007517 // muscle organ development // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0000977 // RNA polymerase II regulatory region sequence-specific DNA binding // inferred from direct assay /// 0000981 // sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from electronic annotation /// 0033613 // activating transcription factor binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0042826 // histone deacetylase binding // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation","chr1:156436007-156470545 (-) // 92.49 // q22"]
["11742429_x_at",0.15265083,-0.07049799,0.026031971,-0.033878565,0.21143985,-0.026031971,0.96583825,0.8954462,-1.0100651,-0.014448249,1.0100651,"down","ZNF716",441234.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:57509882-57533265 (+) // 73.13 // p11.2"]
["11746471_s_at",-0.026681423,0.026681423,-0.056567192,0.035627842,-0.035401344,0.036928654,0.7470517,0.41161686,-1.0218906,-0.031240812,1.0218906,"down","MAP4K4",9448.0,"0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006950 // response to stress // inferred from direct assay /// 0007243 // intracellular protein kinase cascade // inferred from direct assay /// 0016310 // phosphorylation // inferred from electronic annotation /// 0046328 // regulation of JNK cascade // inferred from direct assay","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005083 // small GTPase regulator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr2:102413695-102508449 (+) // 95.66 // q11.2"]
["11721410_s_at",0.014008045,-0.12627554,0.17802382,-0.014008045,-0.13840628,0.07064009,0.8788316,0.6692607,1.0346744,0.04917685,1.0346744,"up","STK16",8576.0,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005798 // Golgi-associated vesicle // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004715 // non-membrane spanning protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr2:220110200-220115174 (+) // 99.32 // q35"]
["11729078_a_at",0.01880908,4.8327446E-4,0.08991027,-0.0018844604,-4.8327446E-4,-0.023818254,0.5720314,0.18601008,1.0317758,0.04512956,1.0317758,"up","SLC26A7",115111.0,"0001696 // gastric acid secretion // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006811 // ion transport // inferred from electronic annotation /// 0006820 // anion transport // inferred from electronic annotation /// 0006821 // chloride transport // inferred from direct assay /// 0006821 // chloride transport // inferred from electronic annotation /// 0008272 // sulfate transport // inferred from direct assay /// 0008272 // sulfate transport // inferred from electronic annotation /// 0015701 // bicarbonate transport // inferred from sequence or structural similarity /// 0015701 // bicarbonate transport // inferred from electronic annotation /// 0019532 // oxalate transport // inferred from direct assay /// 0055085 // transmembrane transport // traceable author statement","0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from mutant phenotype /// 0016323 // basolateral plasma membrane // inferred from sequence or structural similarity /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0055038 // recycling endosome membrane // inferred from electronic annotation","0005253 // anion channel activity // inferred from electronic annotation /// 0005254 // chloride channel activity // inferred from direct assay /// 0005254 // chloride channel activity // inferred from electronic annotation /// 0015106 // bicarbonate transmembrane transporter activity // inferred from sequence or structural similarity /// 0015106 // bicarbonate transmembrane transporter activity // inferred from electronic annotation /// 0015116 // sulfate transmembrane transporter activity // inferred from direct assay /// 0015116 // sulfate transmembrane transporter activity // inferred from electronic annotation /// 0015301 // anion:anion antiporter activity // inferred from electronic annotation /// 0019531 // oxalate transmembrane transporter activity // inferred from direct assay","chr8:92261515-92410383 (+) // 98.58 // q21.3"]
["11726480_at",0.00878191,-0.13769579,-0.008782387,0.18211222,0.072711945,-0.08694363,0.68897057,0.3244929,-1.0731554,-0.101859,1.0731554,"down","FATE1",89885.0,"","0005783 // endoplasmic reticulum // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chrX:150884507-150891666 (+) // 92.97 // q28"]
["11731581_a_at",-0.14529085,0.0145635605,0.032403946,-0.014563084,0.056107998,-0.119119644,0.9790735,0.9319015,-1.0048054,-0.006916188,1.0048054,"down","WASF1",8936.0,"0006461 // protein complex assembly // non-traceable author statement /// 0006928 // cellular component movement // traceable author statement /// 0030041 // actin filament polymerization // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005856 // cytoskeleton // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement /// 0030027 // lamellipodium // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation","chr6:110421021-110501207 (-) // 99.66 // q21"]
["11716458_a_at",-0.0024280548,-0.036533356,0.04681015,0.04802513,0.0024280548,-0.009041786,0.9030458,0.72653824,-1.0077847,-0.011187494,1.0077847,"down","MRPS35",60488.0,"0042769 // DNA damage response, detection of DNA damage // non-traceable author statement /// 0043043 // peptide biosynthetic process // inferred by curator","0005739 // mitochondrion // inferred from electronic annotation /// 0005763 // mitochondrial small ribosomal subunit // inferred from sequence or structural similarity /// 0005763 // mitochondrial small ribosomal subunit // non-traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","","chr12:27863715-27909228 (+) // 86.29 // p11.22"]
["11757069_s_at",0.014541626,-0.045425415,0.060448647,-0.015444756,-0.014541626,0.017107964,0.88592196,0.6855054,1.0098547,0.014147693,1.0098547,"up","LOC100506562",1.00506562E8,"","","","chr2:222808882-222809530 (+) // 96.23 // q36.1 /// chr22:42072546-42073161 (-) // 90.95 // q13.2"]
["11731421_a_at",-0.011545181,0.0040798187,0.016718388,0.033680916,-0.058437347,-0.0040798187,0.8806935,0.67328256,1.0088394,0.012696481,1.0088394,"up","UBE2G2",7327.0,"0006511 // ubiquitin-dependent protein catabolic process // traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0030433 // ER-associated protein catabolic process // inferred from electronic annotation /// 0070936 // protein K48-linked ubiquitination // inferred from direct assay","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation","chr21:46188494-46222170 (-) // 81.22 // q22.3"]
["11731066_x_at",0.0941422,0.029617548,-0.21157932,0.08623147,-0.029617548,-0.09804249,0.9649753,0.89253867,-1.0107763,-0.015463715,1.0107763,"down","GIMAP1",170575.0,"0030183 // B cell differentiation // inferred from electronic annotation /// 0030217 // T cell differentiation // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation","chr7:150413644-150418881 (+) // 86.42 // q36.1"]
["11738896_a_at",-0.035141468,0.021701097,0.21733975,0.099732876,-0.15480351,-0.02170086,0.75795496,0.42756426,1.0669976,0.09355699,1.0669976,"up","CD200R1L",344807.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation","chr3:112538618-112564797 (-) // 79.4 // q13.2"]
["11729057_at",-0.11111021,-0.014238596,-0.05205059,0.06047082,0.014238596,0.13436675,0.3500135,0.045584306,-1.093403,-0.12882522,1.093403,"down","C19orf69",1.00170765E8,"","","","chr19:41949062-41950673 (+) // 70.1 // q13.2"]
["11754026_a_at",-0.017663956,-0.09676504,0.18372726,0.017663956,0.26418114,-0.025826931,0.8647682,0.63942134,-1.0440856,-0.062240027,1.0440856,"down","IL8",3576.0,"0001525 // angiogenesis // traceable author statement /// 0002237 // response to molecule of bacterial origin // inferred from direct assay /// 0006928 // cellular component movement // traceable author statement /// 0006935 // chemotaxis // inferred from electronic annotation /// 0006954 // inflammatory response // traceable author statement /// 0006954 // inflammatory response // inferred from electronic annotation /// 0006955 // immune response // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0007050 // cell cycle arrest // inferred from direct assay /// 0007165 // signal transduction // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0019722 // calcium-mediated signaling // traceable author statement /// 0030155 // regulation of cell adhesion // inferred from direct assay /// 0030593 // neutrophil chemotaxis // inferred from genetic interaction /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0031623 // receptor internalization // inferred from direct assay /// 0035556 // intracellular signal transduction // inferred from direct assay /// 0042119 // neutrophil activation // traceable author statement /// 0044344 // cellular response to fibroblast growth factor stimulus // inferred from expression pattern /// 0045091 // regulation of retroviral genome replication // inferred from direct assay /// 0045744 // negative regulation of G-protein coupled receptor protein signaling pathway // inferred from direct assay /// 0048566 // embryonic digestive tract development // inferred from expression pattern /// 0050930 // induction of positive chemotaxis // inferred from genetic interaction /// 0071222 // cellular response to lipopolysaccharide // inferred from direct assay /// 0071347 // cellular response to interleukin-1 // inferred from expression pattern /// 0071356 // cellular response to tumor necrosis factor // inferred from expression pattern /// 0090023 // positive regulation of neutrophil chemotaxis // traceable author statement","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0005622 // intracellular // inferred from direct assay","0005125 // cytokine activity // inferred from electronic annotation /// 0005153 // interleukin-8 receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008009 // chemokine activity // inferred from electronic annotation /// 0008009 // chemokine activity // traceable author statement","chr4:74606280-74608177 (+) // 70.26 // q13.3"]
["11745068_a_at",0.2529366,0.05324626,-0.1418736,-0.22609997,-0.05324626,0.28170443,0.92861944,0.7878682,1.0381275,0.0539837,1.0381275,"up","ZNF833P",401898.0,"","0005622 // intracellular // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:11750590-11797382 (+) // 70.58 // p13.2"]
["11743790_a_at",0.026936531,-0.041013718,0.05290556,0.02291727,-0.25071144,-0.022917747,0.6998588,0.3397634,1.0691864,0.09651346,1.0691864,"up","FRS2",10818.0,"0000186 // activation of MAPKK activity // traceable author statement /// 0000187 // activation of MAPK activity // inferred from electronic annotation /// 0001702 // gastrulation with mouth forming second // inferred from electronic annotation /// 0001759 // organ induction // inferred from electronic annotation /// 0003281 // ventricular septum development // inferred from electronic annotation /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0007185 // transmembrane receptor protein tyrosine phosphatase signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007405 // neuroblast proliferation // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from genetic interaction /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from electronic annotation /// 0008595 // anterior/posterior axis specification, embryo // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation /// 0046619 // optic placode formation involved in camera-type eye formation // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0050678 // regulation of epithelial cell proliferation // inferred from electronic annotation /// 0060527 // prostate epithelial cord arborization involved in prostate glandular acinus morphogenesis // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005068 // transmembrane receptor protein tyrosine kinase adaptor activity // traceable author statement /// 0005068 // transmembrane receptor protein tyrosine kinase adaptor activity // inferred from electronic annotation /// 0005104 // fibroblast growth factor receptor binding // inferred from physical interaction /// 0005158 // insulin receptor binding // inferred from electronic annotation /// 0005168 // neurotrophin TRKA receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0019211 // phosphatase activator activity // traceable author statement","chr12:69864128-69973573 (+) // 98.22 // q15"]
["11720383_a_at",-0.05570984,1.001358E-4,0.07530737,-0.04376316,0.07770157,-1.001358E-4,0.9790735,0.93211687,-1.0032725,-0.004713559,1.0032725,"down","STX6",10228.0,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006906 // vesicle fusion // inferred from physical interaction /// 0007032 // endosome organization // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0042147 // retrograde transport, endosome to Golgi // inferred from mutant phenotype /// 0048193 // Golgi vesicle transport // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030136 // clathrin-coated vesicle // traceable author statement /// 0032588 // trans-Golgi network membrane // inferred from sequence or structural similarity /// 0032588 // trans-Golgi network membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0005484 // SNAP receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr1:180941851-180992257 (-) // 97.46 // q25.3"]
["11753303_a_at",-0.112867355,0.11230993,0.14004278,-0.036758423,0.036757946,-0.11542511,0.74257237,0.4049165,1.060666,0.08497038,1.060666,"up","TMEM63A",9725.0,"","0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation","chr1:226048423-226054434 (-) // 97.25 // q42.12"]
["11747954_x_at",-0.031255245,-0.0934248,0.029755592,0.079880714,-0.029755592,0.1133728,0.5849023,0.19862694,-1.0615268,-0.08614076,1.0615268,"down","PYROXD1",79912.0,"0055114 // oxidation-reduction process // inferred from electronic annotation","","0016491 // oxidoreductase activity // inferred from electronic annotation","chr12:21590528-21621704 (+) // 95.89 // p12.1 /// chr11:106697101-106698748 (-) // 97.22 // q22.3"]
["11746234_a_at",0.07786703,-2.3794174E-4,0.14863682,-0.10872698,-0.17146826,2.3794174E-4,0.39240402,0.06302933,1.1240772,0.16874112,1.1240772,"up","ZFP106",64397.0,"0008286 // insulin receptor signaling pathway // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation","0001515 // opioid peptide activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr15:42707320-42783397 (-) // 75.26 // q15.1"]
["11745038_s_at",-0.09801769,0.004131317,-0.004131317,0.0062880516,-0.21156406,0.16433334,0.9593091,0.87532604,-1.0132744,-0.01902496,1.0132744,"down","FRAT1",10023.0,"0016055 // Wnt receptor signaling pathway // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","","chr10:99079021-99081580 (+) // 93.94 // q24.1"]
["11720283_at",6.098747E-4,0.03999424,-0.018186092,-6.098747E-4,-0.051214695,0.21879244,0.8473629,0.59953386,-1.0339621,-0.048183348,1.0339621,"down","JMY",133746.0,"0006281 // DNA repair // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from sequence or structural similarity /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from sequence or structural similarity /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0034314 // Arp2/3 complex-mediated actin nucleation // inferred from sequence or structural similarity /// 0034314 // Arp2/3 complex-mediated actin nucleation // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from sequence or structural similarity /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from sequence or structural similarity /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0070060 // 'de novo' actin filament nucleation // inferred from sequence or structural similarity /// 0070060 // 'de novo' actin filament nucleation // inferred from electronic annotation /// 0070358 // actin polymerization-dependent cell motility // inferred from sequence or structural similarity /// 0070358 // actin polymerization-dependent cell motility // inferred from electronic annotation","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0031252 // cell leading edge // inferred from direct assay","0003713 // transcription coactivator activity // inferred from sequence or structural similarity /// 0003713 // transcription coactivator activity // inferred from electronic annotation /// 0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr5:78531924-78623038 (+) // 95.08 // q14.1"]
["11758234_s_at",0.036248207,0.036556244,0.00831604,-0.044796944,-0.03625965,-0.00831604,0.24323496,0.017090378,1.0401784,0.05683101,1.0401784,"up","MED21",9412.0,"0001824 // blastocyst development // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0016592 // mediator complex // inferred from direct assay /// 0016592 // mediator complex // inferred from electronic annotation","0003713 // transcription coactivator activity // inferred from direct assay /// 0003899 // DNA-directed RNA polymerase activity // traceable author statement","chr12:27182182-27182678 (+) // 83.08 // p11.23"]
["11725189_x_at",0.036623,0.037515163,0.33983374,-0.09405756,-0.075773716,-0.036622524,0.4813777,0.113378845,1.1541322,0.20680854,1.1541322,"up","GPR126",57211.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007218 // neuropeptide signaling pathway // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement","chr6:142623055-142767401 (+) // 99.03 // q24.1"]
["11722974_a_at",0.025927544,0.09289646,0.12336445,-0.04340172,-0.08314514,-0.025927544,0.2426667,0.016957652,1.0954733,0.1315543,1.0954733,"up","WDR90",197335.0,"","","","chr16:699362-717830 (+) // 98.43 // p13.3"]
["11724200_a_at",-0.02069354,0.030800343,-0.0042221546,0.004222393,-0.06825209,0.32300448,0.8111736,0.52448714,-1.0602198,-0.08436334,1.0602198,"down","PYGM",5837.0,"0001666 // response to hypoxia // inferred from electronic annotation /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0005977 // glycogen metabolic process // traceable author statement /// 0005977 // glycogen metabolic process // inferred from electronic annotation /// 0005980 // glycogen catabolic process // traceable author statement /// 0005980 // glycogen catabolic process // inferred from electronic annotation /// 0006006 // glucose metabolic process // traceable author statement /// 0006874 // cellular calcium ion homeostasis // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0051591 // response to cAMP // inferred from electronic annotation","0005625 // soluble fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016529 // sarcoplasmic reticulum // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004645 // phosphorylase activity // inferred from electronic annotation /// 0008144 // drug binding // inferred from electronic annotation /// 0008184 // glycogen phosphorylase activity // inferred from electronic annotation /// 0008184 // glycogen phosphorylase activity // traceable author statement /// 0016208 // AMP binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation","chr11:64513861-64528187 (-) // 98.03 // q13.1"]
["11751085_a_at",-0.1056118,-0.10081482,-0.10425758,0.10081482,0.14609528,0.13025093,0.045525856,6.7285146E-5,-1.1722512,-0.22928178,1.1722512,"down","GBA",2629.0,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006665 // sphingolipid metabolic process // traceable author statement /// 0006665 // sphingolipid metabolic process // inferred from electronic annotation /// 0006680 // glucosylceramide catabolic process // inferred from mutant phenotype /// 0006687 // glycosphingolipid metabolic process // traceable author statement /// 0007040 // lysosome organization // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0023021 // termination of signal transduction // inferred from mutant phenotype /// 0032715 // negative regulation of interleukin-6 production // inferred from direct assay /// 0035307 // positive regulation of protein dephosphorylation // inferred from mutant phenotype /// 0043407 // negative regulation of MAP kinase activity // inferred from mutant phenotype /// 0044281 // small molecule metabolic process // traceable author statement /// 0046512 // sphingosine biosynthetic process // inferred from mutant phenotype /// 0046513 // ceramide biosynthetic process // inferred from mutant phenotype /// 0050728 // negative regulation of inflammatory response // inferred by curator /// 0071356 // cellular response to tumor necrosis factor // inferred from mutant phenotype","0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from sequence or structural similarity /// 0005765 // lysosomal membrane // traceable author statement /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0043202 // lysosomal lumen // inferred from sequence or structural similarity /// 0043202 // lysosomal lumen // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004348 // glucosylceramidase activity // inferred from direct assay /// 0004348 // glucosylceramidase activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from sequence or structural similarity /// 0005102 // receptor binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity, acting on glycosyl bonds // inferred from electronic annotation /// 0043169 // cation binding // inferred from electronic annotation","chr1:155204519-155211017 (-) // 99.88 // q22"]
["11723154_s_at",-0.17338014,-0.11780429,0.26063395,0.0854578,0.12216067,-0.08545804,0.91436595,0.7523803,-1.0359136,-0.050903663,1.0359136,"down","CAMTA1",23261.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation","chr1:6845383-7829764 (+) // 97.28 // p36.31"]
["11763795_a_at",-0.00832057,0.051154137,-2.8157234E-4,0.15498352,-0.012565851,2.8157234E-4,0.84229565,0.5893608,-1.0234087,-0.033382334,1.0234087,"down","PICK1",9463.0,"0006200 // ATP catabolic process // inferred from sequence or structural similarity /// 0006468 // protein phosphorylation // inferred from sequence or structural similarity /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006605 // protein targeting // inferred from electronic annotation /// 0006890 // retrograde vesicle-mediated transport, Golgi to ER // non-traceable author statement /// 0007205 // protein kinase C-activating G-protein coupled receptor signaling pathway // inferred from direct assay /// 0007268 // synaptic transmission // traceable author statement /// 0015844 // monoamine transport // inferred from direct assay /// 0016310 // phosphorylation // inferred from electronic annotation /// 0043045 // DNA methylation involved in embryo development // non-traceable author statement /// 0043046 // DNA methylation involved in gamete generation // traceable author statement /// 0043113 // receptor clustering // inferred from sequence or structural similarity /// 0043113 // receptor clustering // inferred from electronic annotation /// 0045161 // neuronal ion channel clustering // traceable author statement","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0030666 // endocytic vesicle membrane // traceable author statement /// 0042734 // presynaptic membrane // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation /// 0045202 // synapse // inferred from sequence or structural similarity /// 0045202 // synapse // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005080 // protein kinase C binding // inferred from sequence or structural similarity /// 0005080 // protein kinase C binding // inferred from electronic annotation /// 0005102 // receptor binding // inferred from sequence or structural similarity /// 0005102 // receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from sequence or structural similarity /// 0019899 // enzyme binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr22:38453401-38470948 (+) // 96.2 // q13.1"]
["11727667_at",0.07296944,0.040466785,0.08906436,-0.040467024,-0.27589798,-0.09217024,0.3581841,0.04902216,1.1516311,0.20367867,1.1516311,"up","DNAH7",56171.0,"0001539 // ciliary or flagellar motility // non-traceable author statement /// 0007018 // microtubule-based movement // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005858 // axonemal dynein complex // non-traceable author statement /// 0005874 // microtubule // inferred from electronic annotation /// 0005929 // cilium // inferred from direct assay /// 0005929 // cilium // inferred from electronic annotation /// 0030286 // dynein complex // inferred from electronic annotation /// 0035085 // cilium axoneme // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003774 // motor activity // inferred from electronic annotation /// 0003777 // microtubule motor activity // non-traceable author statement /// 0003777 // microtubule motor activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation","chr2:196602432-196933554 (-) // 99.13 // q32.3"]
["11721026_a_at",-0.036343575,-0.03278351,0.07017422,0.03278351,0.07005882,-0.068779945,0.95041037,0.84909695,-1.0076573,-0.011005052,1.0076573,"down","OCEL1",79629.0,"","","","chr19:17337012-17340028 (+) // 82.65 // p13.11"]
["11754586_x_at",0.010996819,0.03285694,0.07650471,-0.010996819,-0.022174835,-0.047774315,0.3288901,0.03864583,1.0476098,0.06710147,1.0476098,"up","WDR82",80335.0,"0051568 // histone H3-K4 methylation // inferred from direct assay","0000785 // chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0035097 // histone methyltransferase complex // inferred from direct assay /// 0048188 // Set1C/COMPASS complex // inferred from direct assay /// 0072357 // PTW/PP1 phosphatase complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0042800 // histone methyltransferase activity (H3-K4 specific) // inferred from direct assay","chr3:52288282-52302154 (-) // 88.78 // p21.2"]
["11755263_s_at",0.027868748,-0.027868748,-0.06626129,-0.0667088,0.03872013,0.24714112,0.72506845,0.3785608,-1.0681676,-0.09513798,1.0681676,"down","HSPC072",29075.0,"","","","chr20:18768847-18774634 (-) // 31.16 // p11.23"]
["11756769_a_at",-0.060920477,-0.060056925,-0.07028222,0.060056925,0.13000464,0.15853834,0.13839294,0.0036254777,-1.1328471,-0.17995311,1.1328471,"down","IL12A",3592.0,"0001916 // positive regulation of T cell mediated cytotoxicity // inferred from direct assay /// 0002860 // positive regulation of natural killer cell mediated cytotoxicity directed against tumor cell target // inferred from direct assay /// 0006955 // immune response // traceable author statement /// 0006955 // immune response // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from direct assay /// 0009615 // response to virus // inferred from expression pattern /// 0010224 // response to UV-B // inferred from direct assay /// 0016477 // cell migration // inferred from direct assay /// 0032496 // response to lipopolysaccharide // inferred from direct assay /// 0032700 // negative regulation of interleukin-17 production // inferred from direct assay /// 0032729 // positive regulation of interferon-gamma production // inferred from direct assay /// 0032729 // positive regulation of interferon-gamma production // inferred from electronic annotation /// 0032816 // positive regulation of natural killer cell activation // inferred from direct assay /// 0034393 // positive regulation of smooth muscle cell apoptotic process // inferred from direct assay /// 0042102 // positive regulation of T cell proliferation // inferred from electronic annotation /// 0042520 // positive regulation of tyrosine phosphorylation of Stat4 protein // inferred from direct assay /// 0042832 // defense response to protozoan // inferred from electronic annotation /// 0045785 // positive regulation of cell adhesion // inferred from direct assay /// 0045954 // positive regulation of natural killer cell mediated cytotoxicity // inferred from direct assay /// 0048662 // negative regulation of smooth muscle cell proliferation // inferred from direct assay /// 0050671 // positive regulation of lymphocyte proliferation // inferred from direct assay /// 0050830 // defense response to Gram-positive bacterium // inferred from expression pattern /// 0051135 // positive regulation of NK T cell activation // inferred from direct assay","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0043514 // interleukin-12 complex // inferred from direct assay /// 0043514 // interleukin-12 complex // non-traceable author statement /// 0043514 // interleukin-12 complex // inferred from electronic annotation","0005125 // cytokine activity // inferred from direct assay /// 0005125 // cytokine activity // traceable author statement /// 0005125 // cytokine activity // inferred from electronic annotation /// 0005143 // interleukin-12 receptor binding // non-traceable author statement /// 0005143 // interleukin-12 receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // inferred from direct assay /// 0008083 // growth factor activity // non-traceable author statement /// 0008083 // growth factor activity // inferred from electronic annotation /// 0042163 // interleukin-12 beta subunit binding // inferred from electronic annotation /// 0045513 // interleukin-27 binding // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from physical interaction","chr3:159706647-159713805 (+) // 86.87 // q25.33"]
["11760162_at",-0.057309628,-0.21945715,-0.031979084,0.12262058,0.25541973,0.031979084,0.36572728,0.05202886,-1.1806558,-0.23958847,1.1806558,"down","WSB1",26118.0,"0016310 // phosphorylation // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from direct assay /// 0005622 // intracellular // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0016301 // kinase activity // inferred from electronic annotation","chr17:25629460-25639895 (+) // 91.82 // q11.1"]
["11732201_a_at",0.09500933,-0.016897202,0.029423714,-0.0012149811,-0.023925304,0.0012154579,0.6389835,0.26019162,1.0308398,0.043820146,1.0308398,"up","TMEM39A",55254.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr3:119149700-119182529 (-) // 95.13 // q13.33"]
["11721905_a_at",0.033908844,-0.01564312,0.06140423,-0.034757614,-0.019804,0.01564312,0.6048411,0.21768476,1.0277786,0.039529555,1.0277786,"up","PSMA4",5685.0,"0000075 // cell cycle checkpoint // traceable author statement /// 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000084 // S phase of mitotic cell cycle // traceable author statement /// 0000209 // protein polyubiquitination // traceable author statement /// 0000216 // M/G1 transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051603 // proteolysis involved in cellular protein catabolic process // inferred from electronic annotation","0000502 // proteasome complex // traceable author statement /// 0000502 // proteasome complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005839 // proteasome core complex // inferred from electronic annotation /// 0019773 // proteasome core complex, alpha-subunit complex // inferred from electronic annotation","0004175 // endopeptidase activity // inferred from electronic annotation /// 0004298 // threonine-type endopeptidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr15:78832746-78841546 (+) // 95.14 // q25.1"]
["11760676_at",0.040525913,0.009837151,0.21087503,-0.009837151,-0.12507105,-0.13530731,0.41765395,0.07576992,1.1306491,0.17715123,1.1306491,"up","NUPL2",11097.0,"0005975 // carbohydrate metabolic process // traceable author statement /// 0006611 // protein export from nucleus // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0008645 // hexose transport // traceable author statement /// 0010827 // regulation of glucose transport // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0015758 // glucose transport // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051028 // mRNA transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005643 // nuclear pore // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0005049 // nuclear export signal receptor activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:23221656-23228075 (+) // 78.52 // p15.3"]
["11748734_s_at",-0.088994026,0.122012615,0.089662075,-0.030766487,0.030766964,-0.035609245,0.7916593,0.48709604,1.0372497,0.052763216,1.0372497,"up","TBC1D25",4943.0,"0016242 // negative regulation of macroautophagy // inferred from mutant phenotype /// 0032313 // regulation of Rab GTPase activity // inferred from electronic annotation /// 0032851 // positive regulation of Rab GTPase activity // inferred from electronic annotation /// 0032851 // positive regulation of Rab GTPase activity // inferred from direct assay /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005776 // autophagic vacuole // inferred from direct assay","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005097 // Rab GTPase activator activity // inferred from electronic annotation /// 0005097 // Rab GTPase activator activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008483 // transaminase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chrX:48398116-48419744 (+) // 99.85 // p11.23"]
["11762793_at",0.07170081,-0.025197506,0.021267414,-0.09716296,-0.021267414,0.067136526,0.8037064,0.5112377,1.0278916,0.039688177,1.0278916,"up","YWHAE",7531.0,"0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0001764 // neuron migration // inferred from electronic annotation /// 0006605 // protein targeting // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0021766 // hippocampus development // inferred from electronic annotation /// 0021987 // cerebral cortex development // inferred from electronic annotation /// 0035308 // negative regulation of protein dephosphorylation // inferred from electronic annotation /// 0035329 // hippo signaling cascade // traceable author statement /// 0035556 // intracellular signal transduction // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005871 // kinesin complex // inferred from electronic annotation /// 0033267 // axon part // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0042826 // histone deacetylase binding // inferred from physical interaction /// 0050815 // phosphoserine binding // inferred from physical interaction /// 0051219 // phosphoprotein binding // inferred from physical interaction","chr17:1302126-1303500 (-) // 99.93 // p13.3"]
["11715575_x_at",0.023273468,0.047771454,0.10807896,-0.105914116,-0.023273468,-0.110648155,0.2639582,0.021194356,1.1016402,0.13965315,1.1016402,"up","PPM1G",5496.0,"0006470 // protein dephosphorylation // traceable author statement /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0007050 // cell cycle arrest // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0035970 // peptidyl-threonine dephosphorylation // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0008287 // protein serine/threonine phosphatase complex // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004722 // protein serine/threonine phosphatase activity // inferred from direct assay /// 0004722 // protein serine/threonine phosphatase activity // inferred from electronic annotation /// 0004722 // protein serine/threonine phosphatase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:27604065-27632422 (-) // 49.13 // p23.3"]
["11724103_x_at",-0.07898259,0.1398201,-0.12304592,-0.033059597,0.30215454,0.033059597,0.7430592,0.40575925,-1.0878309,-0.12145431,1.0878309,"down","C8orf44-SGK3 /// SGK3","100533105 /// 23678","0001558 // regulation of cell growth // traceable author statement /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from electronic annotation /// 0006950 // response to stress // traceable author statement /// 0007154 // cell communication // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030334 // regulation of cell migration // traceable author statement /// 0042127 // regulation of cell proliferation // traceable author statement /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // traceable author statement","0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0055037 // recycling endosome // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0005246 // calcium channel regulator activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0015459 // potassium channel regulator activity // traceable author statement /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0017080 // sodium channel regulator activity // traceable author statement /// 0017081 // chloride channel regulator activity // traceable author statement /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation","chr8:67624652-67774257 (+) // 83.03 // q13.1"]
["11742203_x_at",-0.032919884,0.19140244,0.032919884,-0.04061508,0.21987438,-0.049787045,0.9545219,0.8610964,1.0144118,0.020643443,1.0144118,"up","PCDHGA11 /// PCDHGA5 /// PCDHGA7 /// PCDHGC3","5098 /// 56105 /// 56108 /// 56110","0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007156 // homophilic cell adhesion // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0016339 // calcium-dependent cell-cell adhesion // non-traceable author statement","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr5:140800536-140892546 (+) // 100.0 // q31.3"]
["11718676_x_at",-0.066194534,-0.047961235,0.017662048,0.10240841,0.05918789,-0.017662048,0.51666325,0.13834783,-1.0571226,-0.080142684,1.0571226,"down","TMEM245",23731.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","","chr9:111777431-111882230 (-) // 82.14 // q31.3"]
["11736380_s_at",-0.34584665,0.015022278,0.17171812,-0.015022278,0.04818201,-0.09506893,0.95010704,0.8482391,-1.0227114,-0.03239908,1.0227114,"down","ZNF697",90874.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:120162044-120168767 (-) // 93.51 // p12"]
["11716547_s_at",0.0,0.0,-0.04980755,0.33662748,-0.08533144,0.01688528,0.7730082,0.4547171,-1.0762373,-0.10599624,1.0762373,"down","TLR9",54106.0,"0002237 // response to molecule of bacterial origin // traceable author statement /// 0006954 // inflammatory response // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007252 // I-kappaB phosphorylation // inferred from direct assay /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0030277 // maintenance of gastrointestinal epithelium // inferred from sequence or structural similarity /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0032715 // negative regulation of interleukin-6 production // inferred from sequence or structural similarity /// 0032717 // negative regulation of interleukin-8 production // inferred from direct assay /// 0032722 // positive regulation of chemokine production // inferred from direct assay /// 0032728 // positive regulation of interferon-beta production // inferred from sequence or structural similarity /// 0032733 // positive regulation of interleukin-10 production // inferred from sequence or structural similarity /// 0032735 // positive regulation of interleukin-12 production // inferred from sequence or structural similarity /// 0032741 // positive regulation of interleukin-18 production // inferred from sequence or structural similarity /// 0032755 // positive regulation of interleukin-6 production // inferred from direct assay /// 0032757 // positive regulation of interleukin-8 production // inferred from direct assay /// 0032760 // positive regulation of tumor necrosis factor production // inferred from sequence or structural similarity /// 0034122 // negative regulation of toll-like receptor signaling pathway // inferred from direct assay /// 0034123 // positive regulation of toll-like receptor signaling pathway // inferred from direct assay /// 0042346 // positive regulation of NF-kappaB import into nucleus // inferred from direct assay /// 0042742 // defense response to bacterium // non-traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from direct assay /// 0043507 // positive regulation of JUN kinase activity // inferred from direct assay /// 0045078 // positive regulation of interferon-gamma biosynthetic process // inferred from direct assay /// 0045087 // innate immune response // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation /// 0045356 // positive regulation of interferon-alpha biosynthetic process // inferred from direct assay /// 0045359 // positive regulation of interferon-beta biosynthetic process // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0046330 // positive regulation of JNK cascade // inferred by curator /// 0050729 // positive regulation of inflammatory response // inferred by curator /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0051770 // positive regulation of nitric-oxide synthase biosynthetic process // inferred from sequence or structural similarity","0000139 // Golgi membrane // traceable author statement /// 0005576 // extracellular region // non-traceable author statement /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005764 // lysosome // inferred from sequence or structural similarity /// 0005764 // lysosome // inferred from electronic annotation /// 0005768 // endosome // inferred from sequence or structural similarity /// 0005768 // endosome // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0010008 // endosome membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from direct assay /// 0016324 // apical plasma membrane // inferred from direct assay /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0032009 // early phagosome // inferred from sequence or structural similarity /// 0036020 // endolysosome membrane // traceable author statement /// 0045335 // phagocytic vesicle // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005149 // interleukin-1 receptor binding // inferred from physical interaction /// 0035197 // siRNA binding // inferred from mutant phenotype","chr3:52255096-52273276 (-) // 95.16 // p21.2"]
["11727286_a_at",-0.006278038,0.03071022,-0.03435421,0.006278515,-0.052841663,0.2413745,0.797058,0.4985667,-1.0484401,-0.068244435,1.0484401,"down","ZNF323",64288.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016032 // viral reproduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:28292513-28304722 (-) // 72.72 // p22.1"]
["11738762_at",-0.017820358,0.029676914,-0.11332512,-0.04509735,0.07958698,0.017820358,0.7438748,0.40681767,-1.0361692,-0.051259566,1.0361692,"down","OR6Q1",219952.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr11:57798401-57799403 (+) // 100.0 // q12.1"]
["11720400_at",0.0060510635,0.17680025,-0.13371086,-0.0060510635,-0.28909826,0.01407814,0.77210176,0.4538498,1.079281,0.1100705,1.079281,"up","NCS1",23413.0,"0010975 // regulation of neuron projection development // inferred from sequence or structural similarity /// 0010975 // regulation of neuron projection development // inferred from electronic annotation /// 0045921 // positive regulation of exocytosis // inferred from electronic annotation /// 0048015 // phosphatidylinositol-mediated signaling // inferred from electronic annotation /// 0051927 // negative regulation of calcium ion transport via voltage-gated calcium channel activity // inferred from sequence or structural similarity /// 0051927 // negative regulation of calcium ion transport via voltage-gated calcium channel activity // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0031045 // dense core granule // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005509 // calcium ion binding // traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr9:132934641-132999581 (+) // 87.16 // q34.11"]
["11756540_x_at",0.0025987625,-0.0025987625,-0.06339264,-0.20277023,0.19179201,0.103235245,0.88794404,0.6910846,-1.0366172,-0.05188318,1.0366172,"down","TMPRSS5",80975.0,"0006508 // proteolysis // inferred from mutant phenotype /// 0006508 // proteolysis // inferred from electronic annotation","0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0005044 // scavenger receptor activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from mutant phenotype /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr11:113558271-113577065 (-) // 95.05 // q23.2"]
["11756992_a_at",-0.020611763,-0.02099514,0.012374878,-0.006634712,0.030703545,0.006634712,0.6450063,0.2681679,-1.0139444,-0.019978525,1.0139444,"down","MARC2",54996.0,"0042126 // nitrate metabolic process // inferred from direct assay /// 0051410 // detoxification of nitrogen compound // non-traceable author statement /// 0055114 // oxidation-reduction process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005777 // peroxisome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0008940 // nitrate reductase activity // inferred from direct assay /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0030151 // molybdenum ion binding // inferred from direct assay /// 0030151 // molybdenum ion binding // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation /// 0043546 // molybdopterin cofactor binding // inferred from direct assay","chr1:220921610-220957580 (+) // 98.74 // q41"]
["11719313_a_at",-0.0333395,-0.0653553,-0.011280537,0.1394248,0.0112810135,0.12561464,0.33802396,0.041655064,-1.0933576,-0.12876529,1.0933576,"down","FAM111A",63901.0,"0008152 // metabolic process // inferred from electronic annotation","","0003824 // catalytic activity // inferred from electronic annotation","chr11:58910317-58922512 (+) // 78.28 // q12.1"]
["11733985_at",0.030958414,-0.007899284,0.007899523,0.091888666,-0.13705516,-0.12575197,0.7540296,0.42230618,1.0477484,0.067292385,1.0477484,"up","SLC5A8",160728.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006811 // ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation /// 0015293 // symporter activity // inferred from electronic annotation","chr12:101549278-101604185 (-) // 92.54 // q23.1"]
["11718173_a_at",0.051826954,0.04618311,-0.022721767,-0.24505305,0.022721767,-0.07838726,0.5856111,0.19962908,1.0907614,0.12533557,1.0907614,"up","PNKD",25953.0,"","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0004416 // hydroxyacylglutathione hydrolase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:219135114-219211514 (+) // 83.14 // q35"]
["11735382_at",-0.24622297,0.030439138,0.23699808,-0.21109295,0.08190322,-0.030439377,0.9056078,0.7317358,1.0426689,0.060281154,1.0426689,"up","MARVELD3",91862.0,"0045216 // cell-cell junction organization // inferred from mutant phenotype","0005923 // tight junction // inferred from direct assay /// 0005923 // tight junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","","chr16:71660069-71669231 (+) // 81.29 // q22.2"]
["11724809_at",0.06630945,0.107280254,-0.03875017,0.025105953,-0.09097242,-0.025105476,0.62570524,0.24269433,1.0535586,0.07527054,1.0535586,"up","CBL",867.0,"0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0014068 // positive regulation of phosphatidylinositol 3-kinase cascade // inferred from mutant phenotype /// 0016567 // protein ubiquitination // traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0023051 // regulation of signaling // inferred from electronic annotation /// 0042059 // negative regulation of epidermal growth factor receptor signaling pathway // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0048260 // positive regulation of receptor-mediated endocytosis // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016600 // flotillin complex // inferred from sequence or structural similarity /// 0016600 // flotillin complex // inferred from electronic annotation","0001784 // phosphotyrosine binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0004842 // ubiquitin-protein ligase activity // traceable author statement /// 0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from physical interaction /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046875 // ephrin receptor binding // inferred from physical interaction /// 0046875 // ephrin receptor binding // inferred from electronic annotation","chr11:119076984-119178859 (+) // 95.88 // q23.3"]
["11761724_at",0.03505659,0.012959957,-0.012959957,-0.019787312,0.09717417,-0.11832619,0.8967265,0.71165437,1.0177139,0.025332054,1.0177139,"up","SCGB2A2",4250.0,"","","0005496 // steroid binding // inferred from electronic annotation","chr11:62037629-62039513 (+) // 77.86 // q12.3"]
["11749144_s_at",-0.030305862,-0.045414925,0.0013475418,0.07067108,-0.0013475418,0.017039299,0.46621937,0.10471176,-1.0378362,-0.053578753,1.0378362,"down","ETFDH",2110.0,"0006810 // transport // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from sequence or structural similarity /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0022900 // electron transport chain // inferred from direct assay /// 0022900 // electron transport chain // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0033539 // fatty acid beta-oxidation using acyl-CoA dehydrogenase // inferred from mutant phenotype /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0031305 // integral to mitochondrial inner membrane // inferred from direct assay /// 0031966 // mitochondrial membrane // inferred from direct assay /// 0031966 // mitochondrial membrane // inferred from electronic annotation","0004174 // electron-transferring-flavoprotein dehydrogenase activity // inferred from direct assay /// 0004174 // electron-transferring-flavoprotein dehydrogenase activity // inferred from electronic annotation /// 0009055 // electron carrier activity // inferred from direct assay /// 0016491 // oxidoreductase activity // inferred from direct assay /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0043783 // oxidoreductase activity, oxidizing metal ions with flavin as acceptor // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation /// 0048038 // quinone binding // inferred from direct assay /// 0048039 // ubiquinone binding // inferred from direct assay /// 0050660 // flavin adenine dinucleotide binding // inferred from sequence or structural similarity /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation /// 0051539 // 4 iron, 4 sulfur cluster binding // inferred from direct assay /// 0051539 // 4 iron, 4 sulfur cluster binding // inferred from electronic annotation","chr4:159602865-159629865 (+) // 91.13 // q32.1"]
["11754898_a_at",-0.09052658,0.0,0.12755442,0.022321224,0.0,-0.038477898,0.9334088,0.8006397,1.012364,0.017728154,1.012364,"up","ZNF573",126231.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:38229202-38270225 (-) // 91.64 // q13.12"]
["11736992_a_at",0.08046031,0.05258131,-0.05258131,-0.13908911,-0.06683779,0.05258131,0.68728006,0.32197598,1.0555063,0.077935256,1.0555063,"up","C3orf55",152078.0,"","","","chr3:157261034-157296674 (+) // 94.65 // q25.32"]
["11721052_at",-0.08774042,-0.0052776337,0.11986208,0.0052781105,0.15871716,-0.0807786,0.9503146,0.8488669,-1.01311,-0.018790884,1.01311,"down","KLHDC5",57542.0,"","","","chr12:27932813-27955972 (+) // 90.33 // p11.22"]
["11746204_a_at",0.04680276,0.22001123,0.3445859,-0.046802998,-0.11083293,-0.08781409,0.30571005,0.031892374,1.2189312,0.2856167,1.2189312,"up","NFASC",23114.0,"0002175 // protein localization to paranode region of axon // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007411 // axon guidance // inferred from electronic annotation /// 0007422 // peripheral nervous system development // inferred from sequence or structural similarity /// 0007422 // peripheral nervous system development // inferred from electronic annotation /// 0019226 // transmission of nerve impulse // inferred from electronic annotation /// 0030913 // paranodal junction assembly // inferred from electronic annotation /// 0042552 // myelination // inferred from sequence or structural similarity /// 0042552 // myelination // inferred from electronic annotation /// 0050808 // synapse organization // inferred from electronic annotation /// 0071205 // protein localization to juxtaparanode region of axon // inferred from electronic annotation","0005622 // intracellular // inferred from sequence or structural similarity /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0033010 // paranodal junction // inferred from electronic annotation /// 0033268 // node of Ranvier // inferred from sequence or structural similarity /// 0033268 // node of Ranvier // traceable author statement /// 0033268 // node of Ranvier // inferred from electronic annotation /// 0033270 // paranode region of axon // inferred from electronic annotation /// 0043194 // initial segment // inferred from sequence or structural similarity","","chr1:204797700-204946274 (+) // 98.54 // q32.1"]
["11729367_at",0.14171648,-0.063251734,0.034588814,-0.21499634,-0.01937747,0.01937747,0.6763063,0.3076638,1.078742,0.1093499,1.078742,"up","PRKAA2",5563.0,"0006112 // energy reserve metabolic process // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0006694 // steroid biosynthetic process // inferred from electronic annotation /// 0006695 // cholesterol biosynthetic process // inferred from electronic annotation /// 0006853 // carnitine shuttle // traceable author statement /// 0006914 // autophagy // inferred from electronic annotation /// 0006950 // response to stress // inferred from sequence or structural similarity /// 0006950 // response to stress // inferred from electronic annotation /// 0007050 // cell cycle arrest // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008610 // lipid biosynthetic process // inferred from sequence or structural similarity /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0010508 // positive regulation of autophagy // inferred from sequence or structural similarity /// 0010508 // positive regulation of autophagy // inferred from electronic annotation /// 0014823 // response to activity // inferred from electronic annotation /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0016126 // sterol biosynthetic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0019216 // regulation of lipid metabolic process // inferred from electronic annotation /// 0031000 // response to caffeine // inferred from electronic annotation /// 0031669 // cellular response to nutrient levels // inferred from sequence or structural similarity /// 0031669 // cellular response to nutrient levels // inferred from electronic annotation /// 0032007 // negative regulation of TOR signaling cascade // inferred from sequence or structural similarity /// 0032007 // negative regulation of TOR signaling cascade // inferred from electronic annotation /// 0035404 // histone-serine phosphorylation // inferred from sequence or structural similarity /// 0035404 // histone-serine phosphorylation // inferred from electronic annotation /// 0042149 // cellular response to glucose starvation // inferred from sequence or structural similarity /// 0042149 // cellular response to glucose starvation // inferred from electronic annotation /// 0042304 // regulation of fatty acid biosynthetic process // traceable author statement /// 0042593 // glucose homeostasis // inferred from sequence or structural similarity /// 0042593 // glucose homeostasis // inferred from electronic annotation /// 0042752 // regulation of circadian rhythm // inferred from sequence or structural similarity /// 0042752 // regulation of circadian rhythm // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from sequence or structural similarity /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045821 // positive regulation of glycolysis // inferred from sequence or structural similarity /// 0046320 // regulation of fatty acid oxidation // traceable author statement /// 0048511 // rhythmic process // inferred from electronic annotation /// 0051291 // protein heterooligomerization // inferred from electronic annotation /// 0055089 // fatty acid homeostasis // inferred from sequence or structural similarity /// 0071417 // cellular response to organic nitrogen // inferred from electronic annotation /// 2000505 // regulation of energy homeostasis // inferred from sequence or structural similarity","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0031588 // AMP-activated protein kinase complex // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from sequence or structural similarity /// 0003682 // chromatin binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from sequence or structural similarity /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004679 // AMP-activated protein kinase activity // inferred from direct assay /// 0004679 // AMP-activated protein kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0030674 // protein binding, bridging // inferred from electronic annotation /// 0035174 // histone serine kinase activity // inferred from sequence or structural similarity /// 0035174 // histone serine kinase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:57110845-57181008 (+) // 89.25 // p32.2"]
["11740483_at",-0.15534353,0.08285475,0.20060158,-0.24273777,0.26381063,-0.08285475,0.9117721,0.746214,1.0448518,0.0632983,1.0448518,"up","TNR",7143.0,"0007155 // cell adhesion // non-traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007158 // neuron cell-cell adhesion // inferred from electronic annotation /// 0007162 // negative regulation of cell adhesion // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007411 // axon guidance // non-traceable author statement /// 0008306 // associative learning // inferred from electronic annotation /// 0010977 // negative regulation of neuron projection development // inferred from electronic annotation /// 0022029 // telencephalon cell migration // inferred from electronic annotation /// 0022408 // negative regulation of cell-cell adhesion // inferred from electronic annotation /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0030517 // negative regulation of axon extension // inferred from electronic annotation /// 0035641 // locomotory exploration behavior // inferred from electronic annotation /// 0048692 // negative regulation of axon extension involved in regeneration // inferred from electronic annotation /// 0050804 // regulation of synaptic transmission // inferred from electronic annotation /// 0050805 // negative regulation of synaptic transmission // inferred from electronic annotation /// 0050808 // synapse organization // inferred from electronic annotation /// 0050885 // neuromuscular process controlling balance // inferred from electronic annotation /// 0051968 // positive regulation of synaptic transmission, glutamatergic // inferred from electronic annotation /// 0051971 // positive regulation of transmission of nerve impulse // inferred from electronic annotation /// 0060291 // long-term synaptic potentiation // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0009986 // cell surface // inferred from electronic annotation /// 0045121 // membrane raft // inferred from electronic annotation /// 0072534 // perineuronal net // inferred from electronic annotation","0005102 // receptor binding // inferred from electronic annotation /// 0005178 // integrin binding // inferred from electronic annotation","chr1:175291877-175712906 (-) // 96.65 // q25.1"]
["11715220_s_at",-0.032307148,0.03701973,-0.07481098,0.032307148,-0.21089458,0.0848155,0.98183185,0.93890864,1.0054847,0.007891129,1.0054847,"up","C2orf44",80304.0,"","","","chr2:24252205-24270296 (-) // 99.92 // p23.3"]
["11753116_a_at",0.07089901,0.0012989044,-0.058244705,-0.0012989044,0.06772423,-0.029830933,0.9612751,0.88080394,-1.005245,-0.007547118,1.005245,"down","SOX10",6663.0,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0001755 // neural crest cell migration // inferred from electronic annotation /// 0002052 // positive regulation of neuroblast proliferation // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0007422 // peripheral nervous system development // inferred from electronic annotation /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0014015 // positive regulation of gliogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030318 // melanocyte differentiation // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048469 // cell maturation // inferred from electronic annotation /// 0048484 // enteric nervous system development // inferred from electronic annotation /// 0048546 // digestive tract morphogenesis // inferred from electronic annotation /// 0048589 // developmental growth // inferred from electronic annotation /// 0048709 // oligodendrocyte differentiation // inferred from electronic annotation /// 0048863 // stem cell differentiation // inferred from electronic annotation /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0031315 // extrinsic to mitochondrial outer membrane // inferred from electronic annotation","0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from electronic annotation /// 0000980 // RNA polymerase II distal enhancer sequence-specific DNA binding // inferred from electronic annotation /// 0000981 // sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003713 // transcription coactivator activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0044212 // transcription regulatory region DNA binding // inferred from electronic annotation","chr22:38369456-38380562 (-) // 94.53 // q13.1"]
["11727099_a_at",0.07430744,-0.05924797,0.2180891,-0.059814453,-0.02355814,0.02355814,0.6763063,0.30781898,1.0700322,0.09765426,1.0700322,"up","NUMBL",9253.0,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0007405 // neuroblast proliferation // inferred from electronic annotation /// 0007409 // axonogenesis // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // inferred from direct assay /// 0019538 // protein metabolic process // inferred from direct assay /// 0021670 // lateral ventricle development // inferred from sequence or structural similarity /// 0021670 // lateral ventricle development // inferred from electronic annotation /// 0021849 // neuroblast division in subventricular zone // inferred from sequence or structural similarity /// 0021849 // neuroblast division in subventricular zone // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation /// 0034332 // adherens junction organization // inferred from electronic annotation /// 0050769 // positive regulation of neurogenesis // inferred from sequence or structural similarity /// 0050769 // positive regulation of neurogenesis // inferred from electronic annotation /// 0050775 // positive regulation of dendrite morphogenesis // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr19:41171813-41196558 (-) // 86.81 // q13.2"]
["11723740_s_at",-0.02012825,-0.008399963,0.029678345,-0.008520126,0.059823036,0.008399963,0.79139507,0.4860933,-1.0136205,-0.019517602,1.0136205,"down","WDR36",134430.0,"0006364 // rRNA processing // inferred from electronic annotation /// 0007601 // visual perception // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0032040 // small-subunit processome // inferred from electronic annotation","","chr5:110427869-110466200 (+) // 82.61 // q22.1"]
["11716683_x_at",0.11076832,0.113170624,0.07483196,-0.1301508,-0.07483196,-0.08551502,0.08459432,7.268027E-4,1.1458538,0.19642292,1.1458538,"up","SLC39A9",55334.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006829 // zinc ion transport // inferred from electronic annotation /// 0030001 // metal ion transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0046873 // metal ion transmembrane transporter activity // inferred from electronic annotation","chr14:69865074-69929107 (+) // 97.91 // q24.1"]
["11754466_a_at",0.039419174,0.022421837,0.039653778,-0.09313393,-0.075553894,-0.022421837,0.20729958,0.011405835,1.0699437,0.097534835,1.0699437,"up","SH3BP4",23677.0,"0006897 // endocytosis // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005905 // coated pit // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030136 // clathrin-coated vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr2:235887346-235964290 (+) // 99.53 // q37.2"]
["11760417_at",-0.10474968,-0.2829635,0.16314054,-0.052859068,0.052859068,0.19487,0.73881364,0.39883685,-1.1017632,-0.13981424,1.1017632,"down","DUOXA1",90527.0,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr15:45409568-45422075 (-) // 87.29 // q21.1"]
["11718211_s_at",0.03319788,-0.03319788,-0.05149126,0.048295975,-0.105439186,0.037257195,0.9539639,0.8594269,-1.0073291,-0.010535106,1.0073291,"down","PYCR1",5831.0,"0006561 // proline biosynthetic process // inferred from direct assay /// 0006561 // proline biosynthetic process // inferred from electronic annotation /// 0006561 // proline biosynthetic process // traceable author statement /// 0006950 // response to stress // inferred from electronic annotation /// 0008652 // cellular amino acid biosynthetic process // traceable author statement /// 0008652 // cellular amino acid biosynthetic process // inferred from electronic annotation /// 0034599 // cellular response to oxidative stress // inferred from mutant phenotype /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0055129 // L-proline biosynthetic process // inferred from electronic annotation","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0004735 // pyrroline-5-carboxylate reductase activity // inferred from direct assay /// 0004735 // pyrroline-5-carboxylate reductase activity // traceable author statement /// 0004735 // pyrroline-5-carboxylate reductase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction","chr17:79890259-79894968 (-) // 90.68 // q25.3"]
["11759535_at",-0.27249265,0.08342767,0.066578865,-0.066578865,0.15268683,-0.21372223,0.99739075,0.99185485,1.0011855,0.0017093543,1.0011855,"up","MRPS12",6183.0,"0006412 // translation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005761 // mitochondrial ribosome // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0015935 // small ribosomal subunit // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr19:39421187-39423802 (+) // 80.09 // q13.2"]
["11737536_a_at",-0.16983557,-0.038827896,-0.06762409,0.038827896,0.08306122,0.1304121,0.26288724,0.021006498,-1.1299009,-0.17619628,1.1299009,"down","SAMD12",401474.0,"","","","chr8:119390226-119634184 (-) // 77.77 // q24.12"]
["11735581_a_at",-0.042037725,-0.09316087,0.01016593,0.19891548,-0.01016593,0.07228351,0.50452536,0.13022062,-1.0932994,-0.12868851,1.0932994,"down","MBNL3",55796.0,"0006397 // mRNA processing // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0043484 // regulation of RNA splicing // inferred from direct assay /// 0045662 // negative regulation of myoblast differentiation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chrX:131513231-131573718 (-) // 100.0 // q26.2"]
["11748319_x_at",0.03549528,0.12787437,0.15647459,-0.12396288,-0.3458519,-0.03549528,0.36062592,0.050288316,1.2100372,0.27505144,1.2100372,"up","TP53",7157.0,"0000060 // protein import into nucleus, translocation // inferred from electronic annotation /// 0000075 // cell cycle checkpoint // traceable author statement /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // not recorded /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0000733 // DNA strand renaturation // inferred from direct assay /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001756 // somitogenesis // inferred from electronic annotation /// 0001836 // release of cytochrome c from mitochondria // inferred from electronic annotation /// 0002309 // T cell proliferation involved in immune response // inferred from electronic annotation /// 0002326 // B cell lineage commitment // inferred from electronic annotation /// 0002360 // T cell lineage commitment // inferred from electronic annotation /// 0006284 // base-excision repair // traceable author statement /// 0006289 // nucleotide-excision repair // inferred from mutant phenotype /// 0006302 // double-strand break repair // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006461 // protein complex assembly // inferred from direct assay /// 0006915 // apoptotic process // inferred from direct assay /// 0006915 // apoptotic process // inferred from mutant phenotype /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from direct assay /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // inferred from electronic annotation /// 0006978 // DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator // inferred from mutant phenotype /// 0006983 // ER overload response // inferred from direct assay /// 0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from direct assay /// 0007050 // cell cycle arrest // inferred from mutant phenotype /// 0007265 // Ras protein signal transduction // inferred from expression pattern /// 0007275 // multicellular organismal development // inferred from mutant phenotype /// 0007369 // gastrulation // inferred from electronic annotation /// 0007406 // negative regulation of neuroblast proliferation // inferred from electronic annotation /// 0007417 // central nervous system development // inferred from electronic annotation /// 0007569 // cell aging // inferred from mutant phenotype /// 0007569 // cell aging // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008104 // protein localization // inferred from direct assay /// 0008156 // negative regulation of DNA replication // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from sequence or structural similarity /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0008340 // determination of adult lifespan // inferred from sequence or structural similarity /// 0008340 // determination of adult lifespan // inferred from electronic annotation /// 0008629 // induction of apoptosis by intracellular signals // traceable author statement /// 0009303 // rRNA transcription // inferred from electronic annotation /// 0009411 // response to UV // inferred from electronic annotation /// 0009792 // embryo development ending in birth or egg hatching // inferred from electronic annotation /// 0010165 // response to X-ray // not recorded /// 0010165 // response to X-ray // inferred from electronic annotation /// 0010332 // response to gamma radiation // inferred from mutant phenotype /// 0010332 // response to gamma radiation // inferred from electronic annotation /// 0030154 // cell differentiation // traceable author statement /// 0030308 // negative regulation of cell growth // inferred from mutant phenotype /// 0030330 // DNA damage response, signal transduction by p53 class mediator // inferred from direct assay /// 0030330 // DNA damage response, signal transduction by p53 class mediator // inferred from mutant phenotype /// 0030330 // DNA damage response, signal transduction by p53 class mediator // inferred from electronic annotation /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0031065 // positive regulation of histone deacetylation // not recorded /// 0031065 // positive regulation of histone deacetylation // inferred from electronic annotation /// 0031571 // mitotic cell cycle G1/S transition DNA damage checkpoint // inferred from mutant phenotype /// 0031571 // mitotic cell cycle G1/S transition DNA damage checkpoint // inferred from electronic annotation /// 0032461 // positive regulation of protein oligomerization // inferred from direct assay /// 0033077 // T cell differentiation in thymus // inferred from electronic annotation /// 0034613 // cellular protein localization // inferred from direct assay /// 0034644 // cellular response to UV // not recorded /// 0034644 // cellular response to UV // inferred from electronic annotation /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0035690 // cellular response to drug // inferred from expression pattern /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042149 // cellular response to glucose starvation // inferred from direct assay /// 0042493 // response to drug // inferred from electronic annotation /// 0042771 // DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis // inferred from direct assay /// 0042771 // DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043523 // regulation of neuron apoptotic process // inferred from electronic annotation /// 0043525 // positive regulation of neuron apoptotic process // not recorded /// 0043525 // positive regulation of neuron apoptotic process // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from genetic interaction /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046677 // response to antibiotic // inferred from expression pattern /// 0046902 // regulation of mitochondrial membrane permeability // traceable author statement /// 0046902 // regulation of mitochondrial membrane permeability // inferred from electronic annotation /// 0048147 // negative regulation of fibroblast proliferation // inferred from mutant phenotype /// 0048147 // negative regulation of fibroblast proliferation // inferred from electronic annotation /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from sequence or structural similarity /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0051097 // negative regulation of helicase activity // traceable author statement /// 0051262 // protein tetramerization // traceable author statement /// 0051262 // protein tetramerization // inferred from electronic annotation /// 0051276 // chromosome organization // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from electronic annotation /// 0070245 // positive regulation of thymocyte apoptotic process // inferred from sequence or structural similarity /// 0070245 // positive regulation of thymocyte apoptotic process // inferred from electronic annotation /// 0071158 // positive regulation of cell cycle arrest // inferred from mutant phenotype /// 0071456 // cellular response to hypoxia // inferred from expression pattern /// 0071479 // cellular response to ionizing radiation // inferred from mutant phenotype /// 0071850 // mitotic cell cycle arrest // inferred from electronic annotation /// 0072332 // signal transduction by p53 class mediator resulting in induction of apoptosis // inferred from mutant phenotype /// 0090200 // positive regulation of release of cytochrome c from mitochondria // inferred from direct assay /// 0090343 // positive regulation of cell aging // inferred from electronic annotation /// 0090399 // replicative senescence // inferred from mutant phenotype /// 0090403 // oxidative stress-induced premature senescence // inferred from mutant phenotype /// 2000379 // positive regulation of reactive oxygen species metabolic process // inferred from mutant phenotype /// 2001244 // positive regulation of intrinsic apoptotic signaling pathway // inferred from mutant phenotype","0000785 // chromatin // not recorded /// 0000790 // nuclear chromatin // inferred from direct assay /// 0005626 // insoluble fraction // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005657 // replication fork // not recorded /// 0005657 // replication fork // inferred from electronic annotation /// 0005669 // transcription factor TFIID complex // inferred from direct assay /// 0005678 // chromatin assembly complex // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005829 // cytosol // not recorded /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0016363 // nuclear matrix // inferred from direct assay /// 0016604 // nuclear body // inferred from direct assay /// 0016605 // PML body // inferred from direct assay /// 0016605 // PML body // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay","0000739 // DNA strand annealing activity // inferred from direct assay /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from electronic annotation /// 0001085 // RNA polymerase II transcription factor binding // inferred from physical interaction /// 0002020 // protease binding // inferred from physical interaction /// 0002039 // p53 binding // not recorded /// 0003677 // DNA binding // inferred from mutant phenotype /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from direct assay /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003684 // damaged DNA binding // not recorded /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005507 // copper ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008270 // zinc ion binding // traceable author statement /// 0019899 // enzyme binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0035033 // histone deacetylase regulator activity // inferred from electronic annotation /// 0035035 // histone acetyltransferase binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from physical interaction /// 0047485 // protein N-terminus binding // inferred from physical interaction /// 0051087 // chaperone binding // inferred from physical interaction /// 0051721 // protein phosphatase 2A binding // inferred from physical interaction /// 0070215 // MDM2 binding // inferred from electronic annotation","chr17:7576852-7579912 (-) // 85.89 // p13.1"]
["11757798_s_at",-0.017841816,-0.122656345,0.11840677,0.0037808418,-0.0037808418,0.06995773,0.89031523,0.69820356,-1.0214956,-0.030682962,1.0214956,"down","MAFB",9935.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0007379 // segment specification // inferred from electronic annotation /// 0007423 // sensory organ development // traceable author statement /// 0007585 // respiratory gaseous exchange // inferred from electronic annotation /// 0021571 // rhombomere 5 development // inferred from electronic annotation /// 0021572 // rhombomere 6 development // inferred from electronic annotation /// 0035284 // brain segmentation // inferred from electronic annotation /// 0042472 // inner ear morphogenesis // inferred from electronic annotation /// 0045647 // negative regulation of erythrocyte differentiation // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr20:39315595-39315960 (-) // 98.38 // q12"]
["11716029_a_at",-0.010987282,0.00787735,0.07323551,-0.010028839,-0.0078783035,0.010165215,0.7255764,0.37970445,1.018154,0.025955826,1.018154,"up","NDUFB9",4715.0,"0006120 // mitochondrial electron transport, NADH to ubiquinone // non-traceable author statement /// 0006120 // mitochondrial electron transport, NADH to ubiquinone // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007605 // sensory perception of sound // traceable author statement /// 0022900 // electron transport chain // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005747 // mitochondrial respiratory chain complex I // inferred from direct assay /// 0005747 // mitochondrial respiratory chain complex I // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0070469 // respiratory chain // inferred from electronic annotation","0008137 // NADH dehydrogenase (ubiquinone) activity // non-traceable author statement /// 0008137 // NADH dehydrogenase (ubiquinone) activity // traceable author statement","chr8:125551354-125562215 (+) // 66.99 // q24.13"]
["11756982_x_at",0.014258385,0.08810043,0.055350304,-0.06005001,-0.014258385,-0.055054665,0.26128915,0.020724606,1.0685769,0.09569078,1.0685769,"up","AP3S2 /// C15orf38-AP3S2","100526783 /// 10239","0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation","0005794 // Golgi apparatus // inferred from electronic annotation /// 0005794 // Golgi apparatus // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030117 // membrane coat // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0008565 // protein transporter activity // inferred from electronic annotation","chr15:90377561-90437224 (-) // 79.11 // q26.1"]
["11731152_s_at",0.022064209,-0.04304409,0.0613966,-0.022064209,0.062259674,-0.029301643,0.9427819,0.8275415,1.0068445,0.009840916,1.0068445,"up","LOC100288963 /// MTRR","100288963 /// 4552","0006555 // methionine metabolic process // traceable author statement /// 0008652 // cellular amino acid biosynthetic process // inferred from electronic annotation /// 0009086 // methionine biosynthetic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0045111 // intermediate filament cytoskeleton // inferred from direct assay","0005506 // iron ion binding // inferred from electronic annotation /// 0010181 // FMN binding // traceable author statement /// 0010181 // FMN binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016723 // oxidoreductase activity, oxidizing metal ions, NAD or NADP as acceptor // inferred from direct assay /// 0030586 // [methionine synthase] reductase activity // traceable author statement /// 0030586 // [methionine synthase] reductase activity // inferred from electronic annotation /// 0050660 // flavin adenine dinucleotide binding // inferred from direct assay /// 0050660 // flavin adenine dinucleotide binding // traceable author statement /// 0050661 // NADP binding // traceable author statement","chr5:7869216-7901237 (+) // 99.27 // p15.31"]
["11752980_x_at",-0.12274456,0.012015343,-0.025343418,0.009861469,-0.009861469,0.010961056,0.6673385,0.29524007,-1.0345557,-0.049011283,1.0345557,"down","ABHD12",26090.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0016787 // hydrolase activity // inferred from electronic annotation /// 0047372 // acylglycerol lipase activity // inferred from electronic annotation","chr20:25281160-25371349 (-) // 99.56 // p11.21"]
["11761384_at",-0.040759087,-0.020824432,0.009383678,-0.009383678,0.21498585,0.121647835,0.50505155,0.13073707,-1.0916295,-0.12648329,1.0916295,"down","MPP3",4356.0,"0007165 // signal transduction // traceable author statement","0005887 // integral to plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from direct assay","0004385 // guanylate kinase activity // traceable author statement /// 0030165 // PDZ domain binding // inferred from electronic annotation","chr17:41892992-41910536 (-) // 99.25 // q21.31"]
["11755534_a_at",0.0024280548,-0.030474186,0.07126093,-0.047039986,0.08627987,-0.0024280548,0.99005324,0.9675637,1.0014805,0.002134273,1.0014805,"up","ADCY7",113.0,"0006112 // energy reserve metabolic process // traceable author statement /// 0006171 // cAMP biosynthetic process // inferred from direct assay /// 0006171 // cAMP biosynthetic process // inferred from electronic annotation /// 0006833 // water transport // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007189 // adenylate cyclase-activating G-protein coupled receptor signaling pathway // traceable author statement /// 0007193 // adenylate cyclase-inhibiting G-protein coupled receptor signaling pathway // traceable author statement /// 0007202 // activation of phospholipase C activity // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0009190 // cyclic nucleotide biosynthetic process // inferred from electronic annotation /// 0030819 // positive regulation of cAMP biosynthetic process // inferred from direct assay /// 0034199 // activation of protein kinase A activity // traceable author statement /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0071361 // cellular response to ethanol // inferred from direct assay /// 0071377 // cellular response to glucagon stimulus // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004016 // adenylate cyclase activity // inferred from direct assay /// 0004016 // adenylate cyclase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0016849 // phosphorus-oxygen lyase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:50300461-50344439 (+) // 100.0 // q12.1"]
["11743468_at",0.06066513,0.1108675,0.12363911,-0.12319946,-0.09601021,-0.06066513,0.11203619,0.0019116633,1.1420946,0.19168216,1.1420946,"up","DKC1 /// SNORA56","1736 /// 677835","0000723 // telomere maintenance // traceable author statement /// 0001522 // pseudouridine synthesis // inferred from electronic annotation /// 0006364 // rRNA processing // inferred from electronic annotation /// 0006364 // rRNA processing // traceable author statement /// 0006396 // RNA processing // traceable author statement /// 0006396 // RNA processing // inferred from electronic annotation /// 0007004 // telomere maintenance via telomerase // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0009451 // RNA modification // inferred from electronic annotation /// 0042254 // ribosome biogenesis // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005697 // telomerase holoenzyme complex // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0015030 // Cajal body // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003720 // telomerase activity // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0009982 // pseudouridine synthase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation","chrX:153991013-154005959 (+) // 95.17 // q28"]
["11718574_at",-0.017202377,0.034008026,0.03119278,0.017202377,-0.06574249,-0.05416298,0.5631496,0.17827128,1.0354327,0.05023378,1.0354327,"up","SERBP1",26135.0,"0043488 // regulation of mRNA stability // non-traceable author statement /// 0045767 // regulation of anti-apoptosis // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0003730 // mRNA 3'-UTR binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction","chr1:67873494-67896452 (-) // 83.45 // p31.3"]
["11750463_a_at",0.016763687,0.011483192,-0.3196745,-0.011483192,0.0903635,-0.07589245,0.7791272,0.46401557,-1.0703914,-0.09813845,1.0703914,"down","CLEC4M",10332.0,"0006897 // endocytosis // inferred from electronic annotation /// 0007159 // leukocyte cell-cell adhesion // non-traceable author statement /// 0009988 // cell-cell recognition // traceable author statement /// 0019048 // virus-host interaction // traceable author statement /// 0019062 // viral attachment to host cell // traceable author statement /// 0019079 // viral genome replication // non-traceable author statement /// 0019882 // antigen processing and presentation // non-traceable author statement /// 0035556 // intracellular signal transduction // non-traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045087 // innate immune response // inferred from electronic annotation /// 0046795 // intracellular virion transport // traceable author statement /// 0046968 // peptide antigen transport // non-traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005622 // intracellular // traceable author statement /// 0005737 // cytoplasm // non-traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // non-traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0005537 // mannose binding // inferred from electronic annotation /// 0030246 // carbohydrate binding // non-traceable author statement /// 0030246 // carbohydrate binding // inferred from electronic annotation /// 0030369 // ICAM-3 receptor activity // non-traceable author statement /// 0042605 // peptide antigen binding // non-traceable author statement /// 0046790 // virion binding // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:7828129-7833874 (+) // 95.45 // p13.2"]
["11750057_a_at",-0.0064611435,-0.037357807,0.0064611435,0.039854527,-0.10441542,0.05191183,0.96155155,0.88154393,-1.0057253,-0.0082362555,1.0057253,"down","SPSB3",90864.0,"0016567 // protein ubiquitination // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation","chr16:1828064-1831498 (-) // 94.88 // p13.3"]
["11744305_a_at",-0.33402538,0.031726837,-0.15698099,0.07391262,-0.031726837,0.094873905,0.53452903,0.15235676,-1.1477271,-0.19877969,1.1477271,"down","LRRK1",79705.0,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr15:101459419-101610317 (+) // 96.93 // q26.3"]
["11744844_a_at",0.0232625,-0.15598059,0.08046436,-0.091070175,0.109509945,-0.0232625,0.9585456,0.8724812,-1.0110191,-0.015810268,1.0110191,"down","GON4L",54856.0,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation","chr1:155722633-155746250 (-) // 92.08 // q22"]
["11732552_a_at",-0.1898644,0.0531919,-0.15834284,-0.0033328533,0.0033328533,0.085029125,0.5809391,0.19474015,-1.0917795,-0.12668148,1.0917795,"down","ENKUR",219670.0,"","0005929 // cilium // inferred from electronic annotation /// 0019861 // flagellum // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005516 // calmodulin binding // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from electronic annotation","chr10:25270913-25305085 (-) // 75.02 // p12.1"]
["11761186_at",0.0824852,9.863377E-4,-9.863377E-4,-0.18380594,0.11200738,-0.19377303,0.69133323,0.327138,1.0837402,0.11601899,1.0837402,"up","DDX31",64794.0,"","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr9:135535749-135545403 (-) // 98.02 // q34.13"]
["11731147_at",-0.036983013,-0.08087492,0.054611444,0.036983013,0.28662157,-0.270298,0.9426029,0.8263686,-1.0272954,-0.03885102,1.0272954,"down","TLR7",51284.0,"0002224 // toll-like receptor signaling pathway // inferred from electronic annotation /// 0002282 // microglial cell activation involved in immune response // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007252 // I-kappaB phosphorylation // inferred from direct assay /// 0032722 // positive regulation of chemokine production // inferred from direct assay /// 0032755 // positive regulation of interleukin-6 production // inferred from electronic annotation /// 0032757 // positive regulation of interleukin-8 production // inferred from direct assay /// 0034154 // toll-like receptor 7 signaling pathway // inferred from electronic annotation /// 0042221 // response to chemical stimulus // inferred from electronic annotation /// 0042346 // positive regulation of NF-kappaB import into nucleus // inferred from direct assay /// 0045078 // positive regulation of interferon-gamma biosynthetic process // inferred from direct assay /// 0045087 // innate immune response // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation /// 0045356 // positive regulation of interferon-alpha biosynthetic process // inferred from direct assay /// 0045356 // positive regulation of interferon-alpha biosynthetic process // inferred from electronic annotation /// 0045359 // positive regulation of interferon-beta biosynthetic process // inferred from direct assay /// 0045416 // positive regulation of interleukin-8 biosynthetic process // inferred from mutant phenotype /// 0050729 // positive regulation of inflammatory response // inferred by curator /// 0051607 // defense response to virus // inferred from mutant phenotype /// 0051607 // defense response to virus // inferred from electronic annotation /// 0052033 // pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response // inferred from electronic annotation /// 0071260 // cellular response to mechanical stimulus // inferred from expression pattern","0000139 // Golgi membrane // traceable author statement /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005764 // lysosome // inferred from sequence or structural similarity /// 0005764 // lysosome // inferred from electronic annotation /// 0005768 // endosome // inferred from sequence or structural similarity /// 0005768 // endosome // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0010008 // endosome membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0032009 // early phagosome // inferred from sequence or structural similarity /// 0032009 // early phagosome // inferred from electronic annotation /// 0036020 // endolysosome membrane // traceable author statement /// 0045335 // phagocytic vesicle // inferred from electronic annotation","0003725 // double-stranded RNA binding // inferred from direct assay /// 0003727 // single-stranded RNA binding // inferred from sequence or structural similarity /// 0003727 // single-stranded RNA binding // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0008144 // drug binding // inferred from electronic annotation /// 0035197 // siRNA binding // inferred from sequence or structural similarity /// 0035197 // siRNA binding // inferred from electronic annotation","chrX:12885115-12908480 (+) // 93.51 // p22.2"]
["11755706_a_at",-0.010540962,0.017577171,0.058333397,0.010540962,-0.08657932,-0.020853043,0.58238375,0.19620168,1.0382019,0.054087073,1.0382019,"up","BBX",56987.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation","chr3:107429296-107491917 (+) // 82.37 // q13.12"]
["11716548_x_at",0.16709614,0.12531376,0.18721056,-0.13155031,-0.18474197,-0.12531376,0.06607926,3.0432912E-4,1.2371973,0.30707556,1.2371973,"up","FGFR1",2260.0,"0000165 // MAPK cascade // traceable author statement /// 0001501 // skeletal system development // traceable author statement /// 0001764 // neuron migration // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006468 // protein phosphorylation // non-traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from genetic interaction /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from direct assay /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from genetic interaction /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from physical interaction /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from electronic annotation /// 0010518 // positive regulation of phospholipase activity // traceable author statement /// 0010863 // positive regulation of phospholipase C activity // inferred from direct assay /// 0014068 // positive regulation of phosphatidylinositol 3-kinase cascade // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016477 // cell migration // traceable author statement /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0043009 // chordate embryonic development // traceable author statement /// 0043406 // positive regulation of MAP kinase activity // inferred from direct assay /// 0043410 // positive regulation of MAPK cascade // inferred from mutant phenotype /// 0045595 // regulation of cell differentiation // traceable author statement /// 0045666 // positive regulation of neuron differentiation // inferred from mutant phenotype /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0048705 // skeletal system morphogenesis // traceable author statement","0005576 // extracellular region // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005007 // fibroblast growth factor-activated receptor activity // inferred from direct assay /// 0005007 // fibroblast growth factor-activated receptor activity // traceable author statement /// 0005007 // fibroblast growth factor-activated receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008201 // heparin binding // inferred from direct assay /// 0008201 // heparin binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0017134 // fibroblast growth factor binding // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from physical interaction","chr8:38267736-38326352 (-) // 88.37 // p11.23"]
["11755506_a_at",0.0070257187,-0.020246506,0.23825932,-0.010904312,0.2581768,-0.0070257187,0.9904815,0.9686045,-1.00352,-0.0050693867,1.00352,"down","PICALM",8301.0,"0006461 // protein complex assembly // traceable author statement /// 0006897 // endocytosis // inferred from electronic annotation /// 0006898 // receptor-mediated endocytosis // inferred from direct assay /// 0006898 // receptor-mediated endocytosis // inferred from electronic annotation /// 0006898 // receptor-mediated endocytosis // inferred from sequence or structural similarity /// 0007409 // axonogenesis // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // traceable author statement /// 0016197 // endosomal transport // inferred from mutant phenotype /// 0030097 // hemopoiesis // inferred from electronic annotation /// 0030100 // regulation of endocytosis // inferred from mutant phenotype /// 0031623 // receptor internalization // inferred from mutant phenotype /// 0032880 // regulation of protein localization // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0048261 // negative regulation of receptor-mediated endocytosis // inferred from direct assay /// 0048268 // clathrin coat assembly // inferred from mutant phenotype /// 0048268 // clathrin coat assembly // inferred from electronic annotation /// 0048813 // dendrite morphogenesis // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005905 // coated pit // inferred from direct assay /// 0005905 // coated pit // inferred from electronic annotation /// 0005905 // coated pit // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0030118 // clathrin coat // inferred from electronic annotation /// 0030122 // AP-2 adaptor complex // inferred from direct assay /// 0030132 // clathrin coat of coated pit // inferred from direct assay /// 0030136 // clathrin-coated vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0042734 // presynaptic membrane // inferred from sequence or structural similarity /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0045211 // postsynaptic membrane // inferred from sequence or structural similarity /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0005545 // 1-phosphatidylinositol binding // inferred from sequence or structural similarity /// 0005545 // 1-phosphatidylinositol binding // inferred from electronic annotation /// 0030276 // clathrin binding // inferred from direct assay /// 0030276 // clathrin binding // inferred from electronic annotation /// 0030276 // clathrin binding // inferred from sequence or structural similarity /// 0032050 // clathrin heavy chain binding // inferred from direct assay","chr11:85669642-85693032 (-) // 93.19 // q14.2"]
["11727092_x_at",-0.15069294,-0.18061829,0.013754845,0.09260464,0.08728695,-0.013754845,0.42829084,0.08153419,-1.118241,-0.16123109,1.118241,"down","IL18",3606.0,"0000165 // MAPK cascade // inferred from mutant phenotype /// 0001525 // angiogenesis // inferred from direct assay /// 0001649 // osteoblast differentiation // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from direct assay /// 0006955 // immune response // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0009314 // response to radiation // inferred from electronic annotation /// 0009409 // response to cold // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0030155 // regulation of cell adhesion // inferred from direct assay /// 0030324 // lung development // inferred from electronic annotation /// 0030431 // sleep // inferred from sequence or structural similarity /// 0031663 // lipopolysaccharide-mediated signaling pathway // inferred from direct assay /// 0032722 // positive regulation of chemokine production // inferred from electronic annotation /// 0032725 // positive regulation of granulocyte macrophage colony-stimulating factor production // inferred from direct assay /// 0032729 // positive regulation of interferon-gamma production // inferred from direct assay /// 0032729 // positive regulation of interferon-gamma production // inferred from electronic annotation /// 0032731 // positive regulation of interleukin-1 beta production // inferred from electronic annotation /// 0032740 // positive regulation of interleukin-17 production // inferred from direct assay /// 0032757 // positive regulation of interleukin-8 production // inferred from electronic annotation /// 0032760 // positive regulation of tumor necrosis factor production // inferred from electronic annotation /// 0032819 // positive regulation of natural killer cell proliferation // inferred from direct assay /// 0032930 // positive regulation of superoxide anion generation // inferred from electronic annotation /// 0032967 // positive regulation of collagen biosynthetic process // inferred from electronic annotation /// 0034105 // positive regulation of tissue remodeling // inferred by curator /// 0042033 // chemokine biosynthetic process // traceable author statement /// 0042088 // T-helper 1 type immune response // inferred from direct assay /// 0042092 // type 2 immune response // traceable author statement /// 0042094 // interleukin-2 biosynthetic process // traceable author statement /// 0042095 // interferon-gamma biosynthetic process // traceable author statement /// 0042095 // interferon-gamma biosynthetic process // inferred from electronic annotation /// 0042104 // positive regulation of activated T cell proliferation // inferred from direct assay /// 0042231 // interleukin-13 biosynthetic process // traceable author statement /// 0042253 // granulocyte macrophage colony-stimulating factor biosynthetic process // traceable author statement /// 0043117 // positive regulation of vascular permeability // inferred from electronic annotation /// 0043434 // response to peptide hormone stimulus // inferred from electronic annotation /// 0043525 // positive regulation of neuron apoptotic process // inferred from electronic annotation /// 0048546 // digestive tract morphogenesis // inferred from electronic annotation /// 0050729 // positive regulation of inflammatory response // inferred by curator /// 0050966 // detection of mechanical stimulus involved in sensory perception of pain // inferred from electronic annotation /// 0051142 // positive regulation of NK T cell proliferation // inferred from direct assay /// 0055093 // response to hyperoxia // inferred from electronic annotation /// 0060312 // regulation of blood vessel remodeling // inferred from electronic annotation /// 0070301 // cellular response to hydrogen peroxide // inferred from electronic annotation /// 0071222 // cellular response to lipopolysaccharide // inferred from electronic annotation /// 0071260 // cellular response to mechanical stimulus // inferred from electronic annotation /// 0071320 // cellular response to cAMP // inferred from electronic annotation /// 0071346 // cellular response to interferon-gamma // inferred from electronic annotation /// 0071356 // cellular response to tumor necrosis factor // inferred from electronic annotation /// 0071374 // cellular response to parathyroid hormone stimulus // inferred from electronic annotation /// 0071375 // cellular response to peptide hormone stimulus // inferred from electronic annotation /// 0071407 // cellular response to organic cyclic compound // inferred from direct assay /// 2000256 // positive regulation of male germ cell proliferation // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016324 // apical plasma membrane // inferred from electronic annotation","0005125 // cytokine activity // inferred from electronic annotation /// 0005125 // cytokine activity // traceable author statement","chr11:112013973-112034840 (-) // 70.23 // q23.1"]
["11739992_at",0.092294455,0.07095432,0.062655926,-0.062656164,-0.09018874,-0.25179076,0.27748367,0.024372729,1.1568326,0.21018007,1.1568326,"up","PDZD7",79955.0,"","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005929 // cilium // inferred from direct assay /// 0005929 // cilium // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr10:102777089-102790901 (-) // 86.57 // q24.31"]
["11726243_a_at",-0.037416697,-0.37592316,0.037416458,0.10288334,0.10298967,-0.101956844,0.6930984,0.32994264,-1.1172457,-0.15994646,1.1172457,"down","ANKDD1A",348094.0,"0007165 // signal transduction // inferred from electronic annotation","","","chr15:65204100-65603681 (+) // 70.35 // q22.31"]
["11722121_a_at",0.05283308,-0.050457,-0.073872566,-0.07995939,0.050456524,0.1109786,0.7966071,0.49784967,-1.0359762,-0.05099082,1.0359762,"down","PC",5091.0,"0005975 // carbohydrate metabolic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006090 // pyruvate metabolic process // inferred from electronic annotation /// 0006094 // gluconeogenesis // inferred from electronic annotation /// 0006094 // gluconeogenesis // traceable author statement /// 0006107 // oxaloacetate metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement","0005625 // soluble fraction // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement /// 0005759 // mitochondrial matrix // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004075 // biotin carboxylase activity // inferred from electronic annotation /// 0004736 // pyruvate carboxylase activity // traceable author statement /// 0004736 // pyruvate carboxylase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0005524 // ATP binding // traceable author statement /// 0009374 // biotin binding // inferred from electronic annotation /// 0009374 // biotin binding // traceable author statement /// 0016874 // ligase activity // inferred from electronic annotation /// 0031406 // carboxylic acid binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:66615703-66725815 (-) // 94.37 // q13.2"]
["11743919_a_at",0.010399818,0.026748657,-0.027910233,-0.010399818,-0.026730537,0.09246349,0.9023613,0.7247937,-1.0107071,-0.015365026,1.0107071,"down","MAP3K7",6885.0,"0000165 // MAPK cascade // inferred from electronic annotation /// 0000186 // activation of MAPKK activity // inferred from direct assay /// 0000186 // activation of MAPKK activity // traceable author statement /// 0000186 // activation of MAPKK activity // inferred from electronic annotation /// 0000187 // activation of MAPK activity // inferred from direct assay /// 0000187 // activation of MAPK activity // traceable author statement /// 0000187 // activation of MAPK activity // inferred from electronic annotation /// 0001525 // angiogenesis // inferred from electronic annotation /// 0001841 // neural tube formation // inferred from electronic annotation /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002726 // positive regulation of T cell cytokine production // inferred from mutant phenotype /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0007249 // I-kappaB kinase/NF-kappaB cascade // traceable author statement /// 0007250 // activation of NF-kappaB-inducing kinase activity // inferred from mutant phenotype /// 0007252 // I-kappaB phosphorylation // inferred from direct assay /// 0007254 // JNK cascade // inferred from direct assay /// 0007254 // JNK cascade // traceable author statement /// 0008063 // Toll signaling pathway // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0032743 // positive regulation of interleukin-2 production // inferred from mutant phenotype /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from mutant phenotype /// 0043507 // positive regulation of JUN kinase activity // inferred from direct assay /// 0043507 // positive regulation of JUN kinase activity // inferred from mutant phenotype /// 0043966 // histone H3 acetylation // inferred from direct assay /// 0045087 // innate immune response // traceable author statement /// 0050852 // T cell receptor signaling pathway // non-traceable author statement /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0050870 // positive regulation of T cell activation // inferred by curator /// 0051092 // positive regulation of NF-kappaB transcription factor activity // traceable author statement /// 0051403 // stress-activated MAPK cascade // inferred from direct assay /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0070423 // nucleotide-binding oligomerization domain containing signaling pathway // traceable author statement","0005671 // Ada2/Gcn5/Ada3 transcription activator complex // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0008385 // IkappaB kinase complex // inferred from physical interaction /// 0010008 // endosome membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004708 // MAP kinase kinase activity // inferred from electronic annotation /// 0004709 // MAP kinase kinase kinase activity // inferred from direct assay /// 0004709 // MAP kinase kinase kinase activity // inferred from electronic annotation /// 0004709 // MAP kinase kinase kinase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:91225352-91297020 (-) // 99.7 // q15"]
["11730232_s_at",0.07401943,0.093259335,0.026247978,-0.026247978,-0.274127,-0.11990261,0.36735478,0.0524722,1.152368,0.20460144,1.152368,"up","TIAL1",7073.0,"0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // traceable author statement /// 0006952 // defense response // traceable author statement","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005764 // lysosome // traceable author statement /// 0010494 // cytoplasmic stress granule // inferred from sequence or structural similarity","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // non-traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement","chr10:121332837-121356540 (-) // 93.82 // q26.11"]
["11728597_a_at",-0.04192257,0.0075917244,0.10251951,-0.061926365,-0.0075917244,0.03854084,0.8266419,0.55495477,1.0231767,0.033055272,1.0231767,"up","ZNF222",7673.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:44529493-44537263 (+) // 92.27 // q13.31"]
["11754321_x_at",-0.048995018,-0.027484417,-0.086761,0.0406785,0.070764065,0.02748394,0.19256195,0.009482584,-1.0723102,-0.10072232,1.0723102,"down","SLC12A9",56996.0,"0006810 // transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0015377 // cation:chloride symporter activity // traceable author statement","chr7:100456357-100464632 (+) // 91.95 // q22.1"]
["11734047_s_at",-0.20873308,0.015289068,-0.030593634,-0.015289068,0.02611041,0.05126047,0.63124985,0.25046495,-1.0683417,-0.0953732,1.0683417,"down","SDR16C5",195814.0,"0008152 // metabolic process // inferred from electronic annotation /// 0042572 // retinol metabolic process // inferred from direct assay /// 0042572 // retinol metabolic process // inferred from electronic annotation /// 0042574 // retinal metabolic process // inferred from direct assay /// 0043616 // keratinocyte proliferation // inferred from mutant phenotype /// 0050908 // detection of light stimulus involved in visual perception // non-traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004745 // retinol dehydrogenase activity // inferred from direct assay /// 0004745 // retinol dehydrogenase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation","chr8:57212207-57233241 (-) // 94.25 // q12.1"]
["11756139_s_at",0.010023117,0.03700638,0.16270828,-0.013379097,-0.02284336,-0.010023117,0.5246857,0.14494127,1.0609287,0.08532771,1.0609287,"up","LOC728554 /// THOC3","728554 /// 84321","0006397 // mRNA processing // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0046784 // intronless viral mRNA export from host nucleus // inferred from direct assay /// 0051028 // mRNA transport // inferred from electronic annotation","0000346 // transcription export complex // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation","chr5:177302533-177311269 (+) // 95.89 // q35.3 /// chr5:175386533-175395273 (-) // 96.02 // q35.2"]
["11738248_a_at",0.04720211,-0.1460309,0.028462887,-0.083807945,-0.028462887,0.080039024,0.9602233,0.8786155,-1.0088497,-0.012711313,1.0088497,"down","C11orf71",54494.0,"","","","chr11:114270710-114271139 (-) // 48.15 // q23.2"]
["11762283_x_at",0.10706854,-0.1106267,0.009935379,-0.009935141,0.13120556,-0.141392,0.9799923,0.9343803,1.0061413,0.008832935,1.0061413,"up","TMX3",54495.0,"0006662 // glycerol ether metabolic process // inferred from electronic annotation /// 0045454 // cell redox homeostasis // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003756 // protein disulfide isomerase activity // inferred from electronic annotation /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0015035 // protein disulfide oxidoreductase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation","chr18:66364175-66382295 (-) // 88.02 // q22.1"]
["11734921_a_at",-0.119647026,0.031155586,-0.007241726,0.2361393,-0.007241726,0.007241726,0.66349554,0.2904417,-1.0796952,-0.11062413,1.0796952,"down","ZNF276",92822.0,"0006281 // DNA repair // inferred from electronic annotation /// 0006281 // DNA repair // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006461 // protein complex assembly // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007140 // male meiosis // inferred from electronic annotation /// 0008584 // male gonad development // inferred from electronic annotation /// 0008585 // female gonad development // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0043240 // Fanconi anaemia nuclear complex // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:89787394-89807330 (+) // 89.68 // q24.3"]
["11735254_at",-0.041719437,0.008617401,0.011510372,-0.008617878,0.05393648,-0.113573074,0.9257195,0.77906996,1.0108397,0.0155542325,1.0108397,"up","NEK8",284086.0,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0072372 // primary cilium // inferred from sequence or structural similarity /// 0072372 // primary cilium // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:27055807-27069784 (+) // 86.08 // q11.2"]
["11739085_a_at",0.044755936,0.017498016,0.06907272,-0.017498016,-0.06414795,-0.0593071,0.21566616,0.012439172,1.0649309,0.09075984,1.0649309,"up","PCID2",55795.0,"0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043488 // regulation of mRNA stability // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0048536 // spleen development // inferred from sequence or structural similarity /// 0090267 // positive regulation of mitotic cell cycle spindle assembly checkpoint // inferred from mutant phenotype /// 2000117 // negative regulation of cysteine-type endopeptidase activity // inferred from mutant phenotype","","","chr13:113831924-113863025 (-) // 91.72 // q34"]
["11732111_a_at",-0.020888329,-0.025087357,0.050245285,0.020888329,0.12538147,-0.03741741,0.82429415,0.5503972,-1.024458,-0.03486091,1.024458,"down","TNFRSF21",27242.0,"0006915 // apoptotic process // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051402 // neuron apoptotic process // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr6:47199268-47277680 (-) // 92.51 // p12.3"]
["11741462_a_at",-0.057798386,-0.052539825,-0.059864044,0.065294266,0.052539825,0.08121681,0.05333698,1.3700305E-4,-1.0890607,-0.123084314,1.0890607,"down","PRKAG1",5571.0,"0006110 // regulation of glycolysis // traceable author statement /// 0006468 // protein phosphorylation // traceable author statement /// 0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0007050 // cell cycle arrest // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007283 // spermatogenesis // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0045860 // positive regulation of protein kinase activity // traceable author statement /// 0046320 // regulation of fatty acid oxidation // traceable author statement /// 0050790 // regulation of catalytic activity // inferred from electronic annotation /// 0051291 // protein heterooligomerization // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0031588 // AMP-activated protein kinase complex // inferred from sequence or structural similarity /// 0031588 // AMP-activated protein kinase complex // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004679 // AMP-activated protein kinase activity // inferred from sequence or structural similarity /// 0004691 // cAMP-dependent protein kinase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from sequence or structural similarity /// 0005524 // ATP binding // inferred from electronic annotation /// 0008603 // cAMP-dependent protein kinase regulator activity // traceable author statement /// 0016208 // AMP binding // inferred from sequence or structural similarity /// 0016208 // AMP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from direct assay /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0043531 // ADP binding // inferred from sequence or structural similarity","chr12:49396131-49412531 (-) // 90.1 // q13.12"]
["11724872_a_at",-0.002117157,-0.0068683624,-0.0023207664,0.14611244,0.002117157,0.04282427,0.5765622,0.19084674,-1.0478654,-0.0674534,1.0478654,"down","CLDN2",9075.0,"0016338 // calcium-independent cell-cell adhesion // inferred from sequence or structural similarity /// 0016338 // calcium-independent cell-cell adhesion // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0005923 // tight junction // inferred from sequence or structural similarity /// 0005923 // tight junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","0005198 // structural molecule activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from sequence or structural similarity /// 0042802 // identical protein binding // inferred from electronic annotation","chrX:106163633-106174091 (+) // 84.73 // q22.3"]
["11718840_s_at",-0.047236443,-0.005742073,-0.010106087,0.005742073,0.032998085,0.008500099,0.42543533,0.07993561,-1.0258181,-0.036774945,1.0258181,"down","PDHX",8050.0,"0006090 // pyruvate metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0010510 // regulation of acetyl-CoA biosynthetic process from pyruvate // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement /// 0005759 // mitochondrial matrix // inferred from electronic annotation","0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation","chr11:34937676-35017675 (+) // 98.17 // p13"]
["11736536_a_at",-0.10539055,0.20205355,-0.29890013,0.044448376,0.063462734,-0.044448376,0.8402426,0.5856725,-1.0633132,-0.08856667,1.0633132,"down","LEAP2",116842.0,"0042742 // defense response to bacterium // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","","chr5:132206869-132210700 (+) // 94.66 // q31.1"]
["11720645_at",-0.02276659,0.07987833,0.07212305,-0.09164286,0.0072903633,-0.00729084,0.5631928,0.17839284,1.0523584,0.07362611,1.0523584,"up","SPTLC2",9517.0,"0006665 // sphingolipid metabolic process // traceable author statement /// 0006665 // sphingolipid metabolic process // inferred from electronic annotation /// 0006686 // sphingomyelin biosynthetic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009058 // biosynthetic process // inferred from electronic annotation /// 0030148 // sphingolipid biosynthetic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046511 // sphinganine biosynthetic process // inferred from electronic annotation /// 0046512 // sphingosine biosynthetic process // inferred from electronic annotation /// 0046513 // ceramide biosynthetic process // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0017059 // serine C-palmitoyltransferase complex // inferred from direct assay","0003824 // catalytic activity // inferred from electronic annotation /// 0004758 // serine C-palmitoyltransferase activity // inferred from direct assay /// 0004758 // serine C-palmitoyltransferase activity // inferred from electronic annotation /// 0004758 // serine C-palmitoyltransferase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation","chr14:77972340-78083116 (-) // 87.95 // q24.3"]
["11744080_x_at",-0.03169465,0.03169489,0.09699178,-0.10663748,0.32625008,-0.14215755,0.9904393,0.96851677,1.0045242,0.006512365,1.0045242,"up","PRSS1 /// PRSS2 /// PRSS3P2","154754 /// 5644 /// 5645","0006508 // proteolysis // inferred from direct assay /// 0006508 // proteolysis // inferred from electronic annotation /// 0007586 // digestion // inferred from electronic annotation /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0030307 // positive regulation of cell growth // traceable author statement /// 0030574 // collagen catabolic process // inferred from direct assay /// 0030574 // collagen catabolic process // inferred from mutant phenotype /// 0045087 // innate immune response // traceable author statement /// 0045785 // positive regulation of cell adhesion // traceable author statement","0005576 // extracellular region // inferred from direct assay /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from mutant phenotype /// 0005615 // extracellular space // inferred from electronic annotation /// 0031012 // extracellular matrix // traceable author statement","0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from direct assay /// 0004252 // serine-type endopeptidase activity // traceable author statement /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:142456512-142482415 (+) // 83.87 // q34"]
["11745848_a_at",0.08728409,0.049069405,0.12094784,-0.049069405,-0.18807077,-0.09924364,0.21451639,0.012288764,1.1470236,0.19789502,1.1470236,"up","TJP2",9414.0,"0006915 // apoptotic process // traceable author statement /// 0006921 // cellular component disassembly involved in apoptotic process // traceable author statement /// 0035329 // hippo signaling cascade // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005912 // adherens junction // inferred from electronic annotation /// 0005923 // tight junction // inferred from direct assay /// 0005923 // tight junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from direct assay /// 0030054 // cell junction // inferred from electronic annotation","0004385 // guanylate kinase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr9:71819713-71869646 (+) // 99.79 // q21.11"]
["11762322_at",-0.028624535,-0.003585577,-0.04431796,0.10077047,0.0035858154,0.057957172,0.38385004,0.059508625,-1.0567352,-0.07961385,1.0567352,"down","APOL4",80832.0,"0006629 // lipid metabolic process // non-traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // inferred from electronic annotation /// 0042157 // lipoprotein metabolic process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from sequence or structural similarity","0008289 // lipid binding // inferred from electronic annotation","chr22:36593501-36600789 (-) // 60.98 // q12.3"]
["11757247_s_at",-0.13389921,-0.06737614,-0.086625576,0.08181763,0.06737614,0.14269543,0.13124941,0.0031318576,-1.143347,-0.19326335,1.143347,"down","OR6W1P",89883.0,"","","","chr7:142759380-142760882 (-) // 90.75 // q34"]
["11729868_x_at",-0.13795638,0.10576868,-0.08609271,0.031013727,0.010867834,-0.010867834,0.8211585,0.54381824,-1.035096,-0.049764644,1.035096,"down","UGT3A1",133688.0,"0008152 // metabolic process // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0015020 // glucuronosyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0016758 // transferase activity, transferring hexosyl groups // inferred from electronic annotation","chr5:35953191-35991499 (-) // 93.03 // p13.2"]
["11718835_x_at",0.0049262047,0.009324074,-0.0035715103,0.0035719872,-0.17630672,-0.015925407,0.67743754,0.3093386,1.0471342,0.0664463,1.0471342,"up","PELP1",27043.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0071339 // MLL1 complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr17:4574678-4607632 (-) // 92.21 // p13.2"]
["11746193_a_at",0.05974579,-0.032678604,0.026639462,-0.0066485405,-0.017176151,0.0066485405,0.7667226,0.44477516,1.0165123,0.023627635,1.0165123,"up","METTL3",56339.0,"0001510 // RNA methylation // inferred from mutant phenotype /// 0001510 // RNA methylation // inferred from electronic annotation /// 0006139 // nucleobase-containing compound metabolic process // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0032259 // methylation // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0016607 // nuclear speck // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0016422 // mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity // inferred from mutant phenotype /// 0016422 // mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr14:21966305-21979482 (-) // 99.51 // q11.2"]
["11720655_s_at",-0.00880146,0.011457443,0.033332825,-0.019680977,-0.008388519,0.008388519,0.6494542,0.27390164,1.0129455,0.0185566,1.0129455,"up","BBX",56987.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation","chr3:107241782-107530171 (+) // 98.21 // q13.12"]
["11760997_at",-0.052798033,0.034369946,0.1914959,0.086386204,-0.14501739,-0.034369946,0.749448,0.4159898,1.0634038,0.08868959,1.0634038,"up","ARHGAP27",201176.0,"0006897 // endocytosis // inferred from electronic annotation /// 0006898 // receptor-mediated endocytosis // inferred from sequence or structural similarity /// 0007165 // signal transduction // inferred from electronic annotation /// 0032855 // positive regulation of Rac GTPase activity // inferred from sequence or structural similarity /// 0043089 // positive regulation of Cdc42 GTPase activity // inferred from sequence or structural similarity /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation","0005622 // intracellular // inferred from sequence or structural similarity /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from sequence or structural similarity /// 0030675 // Rac GTPase activator activity // inferred from sequence or structural similarity","chr17:43474753-43487765 (-) // 77.9 // q21.31"]
["11732850_x_at",-0.01484108,-0.11635399,-0.18513775,0.026450157,0.034231663,0.014841557,0.3814832,0.05856437,-1.0947632,-0.1306188,1.0947632,"down","CTAGE15P /// CTAGE4 /// CTAGE6P /// CTAGE8 /// CTAGE9","100128553 /// 100142659 /// 340307 /// 441294 /// 643854","","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr7:143880361-143883171 (+) // 98.87 // q35 /// chr7:143268675-143271467 (+) // 96.82 // q35 /// chr6:132029582-132032392 (-) // 99.29 // q23.2 /// chr7:143963768-143966578 (-) // 98.76 // q35 /// chr7:143452194-143454986 (-) // 96.68 // q35"]
["11716284_s_at",0.017703056,0.0012989044,0.064953804,-0.0026464462,-0.0012989044,-0.023294449,0.522257,0.14287871,1.0260245,0.037065126,1.0260245,"up","GLO1",2739.0,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0005975 // carbohydrate metabolic process // non-traceable author statement /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006749 // glutathione metabolic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from direct assay /// 0006916 // anti-apoptosis // inferred from mutant phenotype /// 0006916 // anti-apoptosis // traceable author statement /// 0009438 // methylglyoxal metabolic process // inferred from electronic annotation","0005625 // soluble fraction // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement","0004462 // lactoylglutathione lyase activity // inferred from direct assay /// 0004462 // lactoylglutathione lyase activity // inferred from electronic annotation /// 0004462 // lactoylglutathione lyase activity // traceable author statement /// 0016829 // lyase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:38643715-38670952 (-) // 94.12 // p21.2"]
["11733574_at",-0.023020744,0.05669737,0.023020744,-0.084400654,-0.14100027,0.06269646,0.68800056,0.32317433,1.0519994,0.073133945,1.0519994,"up","PGBD4",161779.0,"","","","chr15:34394273-34396591 (+) // 81.47 // q14"]
["11745263_x_at",0.0230093,0.032769203,-0.02788639,0.05583954,-0.0265131,-0.0230093,0.9464228,0.8372283,1.0049974,0.0071917297,1.0049974,"up","SNX17",9784.0,"0006707 // cholesterol catabolic process // inferred by curator /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // non-traceable author statement /// 0006898 // receptor-mediated endocytosis // inferred from electronic annotation /// 0007154 // cell communication // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016197 // endosomal transport // non-traceable author statement /// 0030100 // regulation of endocytosis // non-traceable author statement","0005622 // intracellular // non-traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0005769 // early endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0016020 // membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from direct assay /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0005102 // receptor binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0008289 // lipid binding // inferred from electronic annotation /// 0035091 // phosphatidylinositol binding // inferred from direct assay /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation /// 0050750 // low-density lipoprotein particle receptor binding // inferred from direct assay","chr2:27593362-27600100 (+) // 98.27 // p23.3"]
["11756435_a_at",-0.0737381,-0.059990883,-0.12022114,0.07818031,0.059990883,0.11546707,0.116851225,0.0022946794,-1.1244317,-0.16919607,1.1244317,"down","C1orf85",112770.0,"0030522 // intracellular receptor mediated signaling pathway // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 2001141 // regulation of RNA biosynthetic process // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005764 // lysosome // inferred from direct assay /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from sequence or structural similarity /// 0016021 // integral to membrane // inferred from electronic annotation","0000988 // protein binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from mutant phenotype /// 0004879 // ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from mutant phenotype /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay","chr1:156262486-156265468 (-) // 98.24 // q22"]
["11733815_at",0.053233147,0.004660845,0.004660845,-0.004661083,-0.16941166,-0.073480606,0.47484955,0.10978395,1.0742795,0.10336946,1.0742795,"up","RPL22L1",200916.0,"0006412 // translation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005840 // ribosome // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003735 // structural constituent of ribosome // inferred from electronic annotation","chr3:170582666-170588045 (-) // 76.44 // q26.2"]
["11734286_a_at",-0.005405426,-0.0996418,-0.035068512,0.09091759,0.005405426,0.075237274,0.36846152,0.05328314,-1.0746688,-0.10389206,1.0746688,"down","COX7B2",170712.0,"","0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005746 // mitochondrial respiratory chain // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004129 // cytochrome-c oxidase activity // inferred from electronic annotation","chr4:46736869-46847032 (-) // 75.3 // p12"]
["11715612_s_at",0.0334301,0.06444645,0.055685997,-0.0334301,-0.04818821,-0.05490589,0.09022232,9.899888E-4,1.0693214,0.096695535,1.0693214,"up","TMX2",51075.0,"0045454 // cell redox homeostasis // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr11:57479994-57508445 (+) // 93.05 // q12.1"]
["11747619_a_at",-0.102442265,-0.027889252,-0.1497407,0.027889729,0.036980152,0.06391239,0.26402077,0.021289328,-1.0990711,-0.13628477,1.0990711,"down","CERS5",91012.0,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006665 // sphingolipid metabolic process // traceable author statement /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0030148 // sphingolipid biosynthetic process // traceable author statement /// 0030148 // sphingolipid biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046513 // ceramide biosynthetic process // inferred from direct assay /// 0046513 // ceramide biosynthetic process // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0050291 // sphingosine N-acyltransferase activity // inferred from direct assay /// 0050291 // sphingosine N-acyltransferase activity // inferred from electronic annotation","chr12:50523581-50561152 (-) // 90.2 // q13.12"]
["11734039_x_at",0.08139634,-0.024692535,-0.06342435,-0.03987336,0.024692535,0.072282314,0.8983898,0.7143519,-1.0148553,-0.021273991,1.0148553,"down","FEZ1",9638.0,"0006810 // transport // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007399 // nervous system development // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0010976 // positive regulation of neuron projection development // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from electronic annotation /// 0051654 // establishment of mitochondrion localization // inferred from electronic annotation /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005813 // centrosome // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005080 // protein kinase C binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0043015 // gamma-tubulin binding // inferred from electronic annotation","chr11:125358109-125366259 (-) // 66.77 // q24.2"]
["11764117_s_at",-0.01007843,0.01007843,0.07164097,-0.040768623,0.07404232,-0.04331112,0.8396498,0.5845647,1.019051,0.027226193,1.019051,"up","SMARCA5",8467.0,"0000183 // chromatin silencing at rDNA // inferred from electronic annotation /// 0006200 // ATP catabolic process // inferred from direct assay /// 0006302 // double-strand break repair // inferred from electronic annotation /// 0006333 // chromatin assembly or disassembly // inferred from electronic annotation /// 0006334 // nucleosome assembly // inferred from direct assay /// 0006334 // nucleosome assembly // traceable author statement /// 0006338 // chromatin remodeling // inferred from direct assay /// 0006338 // chromatin remodeling // inferred from electronic annotation /// 0006338 // chromatin remodeling // traceable author statement /// 0006352 // transcription initiation, DNA-dependent // inferred from direct assay /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0009790 // embryo development // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0016584 // nucleosome positioning // inferred from direct assay /// 0034080 // CenH3-containing nucleosome assembly at centromere // traceable author statement /// 0043044 // ATP-dependent chromatin remodeling // inferred from mutant phenotype /// 0043044 // ATP-dependent chromatin remodeling // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation","0000793 // condensed chromosome // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005677 // chromatin silencing complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0016585 // chromatin remodeling complex // inferred from electronic annotation /// 0016589 // NURF complex // inferred from direct assay /// 0031213 // RSF complex // inferred from physical interaction /// 0043596 // nuclear replication fork // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0004386 // helicase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016817 // hydrolase activity, acting on acid anhydrides // inferred from electronic annotation /// 0016818 // hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from direct assay /// 0031491 // nucleosome binding // inferred from electronic annotation /// 0042393 // histone binding // inferred from direct assay","chr4:144475139-144475524 (+) // 100.0 // q31.21"]
["11762407_at",-0.19042969,0.18206358,0.032191277,-0.03925419,0.059972763,-0.032191277,0.9755149,0.92196846,1.0081888,0.011765895,1.0081888,"up","IL18BP",10068.0,"0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0042088 // T-helper 1 type immune response // inferred from direct assay /// 0070301 // cellular response to hydrogen peroxide // inferred from electronic annotation /// 0071356 // cellular response to tumor necrosis factor // inferred from electronic annotation /// 1900116 // extracellular negative regulation of signal transduction // traceable author statement","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation","0042007 // interleukin-18 binding // inferred from direct assay /// 0048019 // receptor antagonist activity // traceable author statement","chr11:71710108-71714799 (+) // 97.3 // q13.4"]
["11743093_a_at",-5.750656E-4,-0.21275711,-0.02231121,0.16609907,5.750656E-4,5.750656E-4,0.5842015,0.19796884,-1.0975583,-0.13429752,1.0975583,"down","LIN7A",8825.0,"0006461 // protein complex assembly // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006887 // exocytosis // inferred from electronic annotation /// 0006887 // exocytosis // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0005923 // tight junction // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0097016 // L27 domain binding // inferred from physical interaction","chr12:81190723-81331702 (-) // 90.48 // q21.31"]
["11731688_at",-0.04038596,0.01416707,-0.055842876,-0.0050771236,0.02340293,0.0050771236,0.5845177,0.1981408,-1.0246668,-0.03515483,1.0246668,"down","SI",6476.0,"0005975 // carbohydrate metabolic process // traceable author statement /// 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0007584 // response to nutrient // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009744 // response to sucrose stimulus // inferred from electronic annotation /// 0009750 // response to fructose stimulus // inferred from electronic annotation /// 0032868 // response to insulin stimulus // inferred from electronic annotation /// 0033189 // response to vitamin A // inferred from electronic annotation /// 0042594 // response to starvation // inferred from electronic annotation /// 0044245 // polysaccharide digestion // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation","0005794 // Golgi apparatus // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005903 // brush border // inferred from electronic annotation /// 0005903 // brush border // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0045121 // membrane raft // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004553 // hydrolase activity, hydrolyzing O-glycosyl compounds // inferred from electronic annotation /// 0004558 // alpha-glucosidase activity // traceable author statement /// 0004564 // beta-fructofuranosidase activity // inferred from electronic annotation /// 0004574 // oligo-1,6-glucosidase activity // inferred from electronic annotation /// 0004575 // sucrose alpha-glucosidase activity // traceable author statement /// 0004575 // sucrose alpha-glucosidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity, acting on glycosyl bonds // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr3:164696686-164796280 (-) // 98.59 // q26.1"]
["11760123_at",-0.09102988,0.033435345,0.29685235,0.092895746,-0.10776019,-0.033435345,0.7962757,0.49706173,1.0686967,0.09585252,1.0686967,"up","PIAS3",10401.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0009725 // response to hormone stimulus // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0016925 // protein sumoylation // inferred from electronic annotation /// 0016925 // protein sumoylation // inferred from sequence or structural similarity /// 0033235 // positive regulation of protein sumoylation // inferred from direct assay /// 0045838 // positive regulation of membrane potential // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0015459 // potassium channel regulator activity // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0019789 // SUMO ligase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from electronic annotation /// 0051059 // NF-kappaB binding // inferred from physical interaction","chr1:145575223-145584017 (+) // 90.5 // q21.1"]
["11760885_a_at",-0.043434143,0.02459979,-0.07160187,-0.014969349,0.014969587,0.053064346,0.6231948,0.23994255,-1.0337116,-0.04783367,1.0337116,"down","RXRB",6257.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0030522 // intracellular receptor mediated signaling pathway // inferred from direct assay /// 0043401 // steroid hormone mediated signaling pathway // inferred from electronic annotation /// 0048384 // retinoic acid receptor signaling pathway // inferred from electronic annotation /// 0055012 // ventricular cardiac muscle cell differentiation // inferred from electronic annotation /// 0060038 // cardiac muscle cell proliferation // inferred from electronic annotation /// 0071300 // cellular response to retinoic acid // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003707 // steroid hormone receptor activity // inferred from electronic annotation /// 0003713 // transcription coactivator activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0004879 // ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from direct assay /// 0004886 // 9-cis retinoic acid receptor activity // inferred from electronic annotation /// 0004886 // 9-cis retinoic acid receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0030375 // thyroid hormone receptor coactivator activity // inferred from electronic annotation /// 0042809 // vitamin D receptor binding // inferred from electronic annotation /// 0042974 // retinoic acid receptor binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046966 // thyroid hormone receptor binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr6:33163848-33168635 (-) // 97.99 // p21.32"]
["11757022_x_at",0.008648872,-0.008648872,0.015017509,-0.12332249,-0.11018562,0.018203735,0.55226207,0.16823336,1.0546571,0.076774016,1.0546571,"up","TFPI2",7980.0,"0007596 // blood coagulation // inferred from electronic annotation /// 0007599 // hemostasis // inferred from electronic annotation /// 0010466 // negative regulation of peptidase activity // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // traceable author statement","0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0005201 // extracellular matrix structural constituent // traceable author statement /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation","chr7:93515993-93518433 (-) // 98.75 // q21.3"]
["11759967_at",-0.03659463,0.02846241,0.10686207,-0.028462172,0.037414074,-0.17359328,0.6752172,0.30600518,1.0627413,0.08779042,1.0627413,"up","LOC100128816",1.00128816E8,"","","","chr12:3720052-3721169 (-) // 28.32 // p13.32"]
["11731325_a_at",0.1426673,0.010766745,-0.13477278,-0.010766983,0.22623181,-0.1047318,0.94057024,0.82085747,-1.021501,-0.030690538,1.021501,"down","CAPN8",388743.0,"0006508 // proteolysis // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation","0004198 // calcium-dependent cysteine-type endopeptidase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr1:223714978-223853436 (-) // 85.64 // q41"]
["11721813_at",0.0011825562,-0.013102055,0.01599741,-0.01599741,-0.001183033,0.01405859,0.9511379,0.85217685,1.0016649,0.0023999123,1.0016649,"up","VWA1",64856.0,"0030198 // extracellular matrix organization // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005604 // basement membrane // inferred from electronic annotation /// 0005614 // interstitial matrix // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from electronic annotation","","chr1:1370902-1378262 (+) // 96.77 // p36.33"]
["11755274_a_at",-0.09482288,6.787777E-4,-0.058680058,0.12313104,0.03197241,-6.785393E-4,0.44451657,0.09162108,-1.07357,-0.10241628,1.07357,"down","CATSPERD",257062.0,"0001539 // ciliary or flagellar motility // inferred from sequence or structural similarity /// 0001539 // ciliary or flagellar motility // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from sequence or structural similarity /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030317 // sperm motility // inferred from sequence or structural similarity /// 0030317 // sperm motility // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0019861 // flagellum // inferred from electronic annotation /// 0020017 // flagellar membrane // inferred from sequence or structural similarity /// 0020017 // flagellar membrane // inferred from electronic annotation /// 0036128 // CatSper complex // inferred from sequence or structural similarity /// 0042995 // cell projection // inferred from electronic annotation","","chr19:5753644-5778744 (+) // 86.73 // p13.3"]
["11729487_at",-0.005376816,0.005376816,-0.08284187,0.03187275,-0.24111223,0.09243202,0.97503364,0.92029595,1.0078785,0.011321792,1.0078785,"up","RGS6",9628.0,"0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0008277 // regulation of G-protein coupled receptor protein signaling pathway // non-traceable author statement /// 0008277 // regulation of G-protein coupled receptor protein signaling pathway // traceable author statement /// 0009968 // negative regulation of signal transduction // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0038032 // termination of G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // not recorded /// 0043547 // positive regulation of GTPase activity // traceable author statement /// 0045666 // positive regulation of neuron differentiation // inferred from electronic annotation","0005737 // cytoplasm // not recorded /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005834 // heterotrimeric G-protein complex // inferred from electronic annotation /// 0005886 // plasma membrane // not recorded /// 0016020 // membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0005096 // GTPase activator activity // not recorded /// 0005096 // GTPase activator activity // traceable author statement","chr14:72399754-73033237 (+) // 97.11 // q24.2"]
["11741408_a_at",-6.6018105E-4,6.599426E-4,0.03717971,-0.010987759,0.061695814,-0.09069991,0.8496117,0.6037335,1.0179902,0.025723718,1.0179902,"up","NEFM",4741.0,"0000226 // microtubule cytoskeleton organization // inferred from electronic annotation /// 0008088 // axon cargo transport // inferred from electronic annotation /// 0031133 // regulation of axon diameter // inferred from electronic annotation /// 0045104 // intermediate filament cytoskeleton organization // inferred from electronic annotation /// 0060052 // neurofilament cytoskeleton organization // inferred from electronic annotation","0005856 // cytoskeleton // inferred from electronic annotation /// 0005882 // intermediate filament // inferred from electronic annotation /// 0005883 // neurofilament // inferred from electronic annotation /// 0005883 // neurofilament // traceable author statement /// 0030424 // axon // traceable author statement /// 0030424 // axon // inferred from electronic annotation /// 0031594 // neuromuscular junction // inferred from electronic annotation","0005198 // structural molecule activity // inferred from electronic annotation /// 0005200 // structural constituent of cytoskeleton // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr8:24772454-24776606 (+) // 76.74 // p21.2"]
["11726289_at",0.0068149567,0.0016098022,0.07911301,-0.0016098022,-0.049711227,-0.0016403198,0.5757687,0.19004387,1.0329949,0.046833083,1.0329949,"up","GRAMD3",65983.0,"","","","chr5:125758833-125830216 (+) // 95.05 // q23.2"]
["11758955_at",0.1495738,0.034152508,0.023493767,-0.02720642,-0.09376049,-0.023493767,0.39584187,0.0648181,1.084648,0.117226936,1.084648,"up","LGALS8",3964.0,"","0005615 // extracellular space // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation","0030246 // carbohydrate binding // inferred from electronic annotation /// 0030246 // carbohydrate binding // traceable author statement","chr1:236686898-236714814 (+) // 97.01 // q43"]
["11733338_x_at",0.049623013,0.0082798,-0.043841362,-0.0082798,-0.04954815,0.014528275,0.84387493,0.5923675,1.0133414,0.019120345,1.0133414,"up","FANCE",2178.0,"0006281 // DNA repair // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0043240 // Fanconi anaemia nuclear complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr6:35420115-35434879 (+) // 85.74 // p21.31"]
["11722806_at",0.09127951,-0.012965202,-0.011685848,0.011685848,0.019705296,-0.08202124,0.7746589,0.45707482,1.0274628,0.039086215,1.0274628,"up","RAB35",11021.0,"0000910 // cytokinesis // inferred from mutant phenotype /// 0006184 // GTP catabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0008104 // protein localization // inferred from mutant phenotype /// 0015031 // protein transport // inferred from electronic annotation /// 0016197 // endosomal transport // inferred from mutant phenotype","0005739 // mitochondrion // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005905 // coated pit // inferred from direct assay /// 0005905 // coated pit // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030136 // clathrin-coated vesicle // inferred from electronic annotation /// 0031253 // cell projection membrane // inferred from direct assay /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0045171 // intercellular bridge // inferred from direct assay /// 0045334 // clathrin-coated endocytic vesicle // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0005525 // GTP binding // inferred from electronic annotation /// 0005546 // phosphatidylinositol-4,5-bisphosphate binding // inferred from direct assay","chr12:120532902-120554643 (-) // 96.35 // q24.23"]
["11740008_s_at",0.024309158,0.013076782,-0.013076782,0.19696116,-0.106524944,-0.1186378,0.95918566,0.8743115,1.0122064,0.017503552,1.0122064,"up","CHRFAM7A /// CHRNA7","1139 /// 89832","0000187 // activation of MAPK activity // inferred from direct assay /// 0001666 // response to hypoxia // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // non-traceable author statement /// 0006811 // ion transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from direct assay /// 0006816 // calcium ion transport // inferred from mutant phenotype /// 0006874 // cellular calcium ion homeostasis // inferred from mutant phenotype /// 0007165 // signal transduction // inferred from direct assay /// 0007268 // synaptic transmission // traceable author statement /// 0007613 // memory // non-traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0032720 // negative regulation of tumor necrosis factor production // inferred from direct assay /// 0032720 // negative regulation of tumor necrosis factor production // inferred from mutant phenotype /// 0035094 // response to nicotine // inferred from direct assay /// 0042221 // response to chemical stimulus // inferred from direct assay /// 0045766 // positive regulation of angiogenesis // inferred from mutant phenotype /// 0050890 // cognition // inferred from mutant phenotype /// 0050890 // cognition // non-traceable author statement","0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005892 // acetylcholine-gated channel complex // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0001540 // beta-amyloid binding // inferred from physical interaction /// 0004872 // receptor activity // inferred from electronic annotation /// 0004889 // acetylcholine-activated cation-selective channel activity // inferred from direct assay /// 0004889 // acetylcholine-activated cation-selective channel activity // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005230 // extracellular ligand-gated ion channel activity // inferred from electronic annotation /// 0015464 // acetylcholine receptor activity // inferred from direct assay /// 0015643 // toxin binding // inferred from direct assay /// 0017081 // chloride channel regulator activity // inferred from direct assay /// 0042166 // acetylcholine binding // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from direct assay","chr15:30652770-30685864 (-) // 93.01 // q13.2"]
["11740395_a_at",-0.03182006,0.060534716,-0.3723991,0.03182006,-0.12787104,0.03182006,0.8230969,0.54764813,-1.0666976,-0.093151234,1.0666976,"down","FGFR2",2263.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0001525 // angiogenesis // inferred from sequence or structural similarity /// 0001657 // ureteric bud development // inferred from sequence or structural similarity /// 0001701 // in utero embryonic development // inferred from sequence or structural similarity /// 0002053 // positive regulation of mesenchymal cell proliferation // inferred from sequence or structural similarity /// 0003148 // outflow tract septum morphogenesis // inferred from sequence or structural similarity /// 0003149 // membranous septum morphogenesis // inferred from sequence or structural similarity /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007267 // cell-cell signaling // inferred from sequence or structural similarity /// 0007409 // axonogenesis // inferred from sequence or structural similarity /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from genetic interaction /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from direct assay /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from genetic interaction /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from physical interaction /// 0008543 // fibroblast growth factor receptor signaling pathway // non-traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from electronic annotation /// 0008589 // regulation of smoothened signaling pathway // inferred from sequence or structural similarity /// 0009791 // post-embryonic development // inferred from sequence or structural similarity /// 0009880 // embryonic pattern specification // inferred from sequence or structural similarity /// 0009887 // organ morphogenesis // inferred from sequence or structural similarity /// 0010453 // regulation of cell fate commitment // inferred from sequence or structural similarity /// 0010518 // positive regulation of phospholipase activity // inferred from mutant phenotype /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016331 // morphogenesis of embryonic epithelium // inferred from sequence or structural similarity /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0021769 // orbitofrontal cortex development // inferred from sequence or structural similarity /// 0021847 // ventricular zone neuroblast division // inferred from sequence or structural similarity /// 0021860 // pyramidal neuron development // inferred from sequence or structural similarity /// 0022612 // gland morphogenesis // inferred from sequence or structural similarity /// 0030177 // positive regulation of Wnt receptor signaling pathway // inferred from sequence or structural similarity /// 0030282 // bone mineralization // inferred from sequence or structural similarity /// 0030324 // lung development // inferred from sequence or structural similarity /// 0030855 // epithelial cell differentiation // inferred from sequence or structural similarity /// 0030901 // midbrain development // inferred from sequence or structural similarity /// 0030916 // otic vesicle formation // inferred from sequence or structural similarity /// 0031069 // hair follicle morphogenesis // inferred from sequence or structural similarity /// 0032808 // lacrimal gland development // inferred from sequence or structural similarity /// 0033688 // regulation of osteoblast proliferation // traceable author statement /// 0035264 // multicellular organism growth // inferred from sequence or structural similarity /// 0035265 // organ growth // inferred from sequence or structural similarity /// 0035602 // fibroblast growth factor receptor signaling pathway involved in negative regulation of apoptotic process in bone marrow // inferred from sequence or structural similarity /// 0035603 // fibroblast growth factor receptor signaling pathway involved in hemopoiesis // inferred from sequence or structural similarity /// 0035604 // fibroblast growth factor receptor signaling pathway involved in positive regulation of cell proliferation in bone marrow // inferred from sequence or structural similarity /// 0035607 // fibroblast growth factor receptor signaling pathway involved in orbitofrontal cortex development // inferred from sequence or structural similarity /// 0040014 // regulation of multicellular organism growth // inferred from sequence or structural similarity /// 0040036 // regulation of fibroblast growth factor receptor signaling pathway // inferred from sequence or structural similarity /// 0042472 // inner ear morphogenesis // inferred from sequence or structural similarity /// 0042476 // odontogenesis // inferred from sequence or structural similarity /// 0043410 // positive regulation of MAPK cascade // inferred from mutant phenotype /// 0045165 // cell fate commitment // inferred from sequence or structural similarity /// 0045667 // regulation of osteoblast differentiation // traceable author statement /// 0045787 // positive regulation of cell cycle // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0048286 // lung alveolus development // inferred from sequence or structural similarity /// 0048557 // embryonic digestive tract morphogenesis // inferred from sequence or structural similarity /// 0048562 // embryonic organ morphogenesis // inferred from sequence or structural similarity /// 0048565 // digestive tract development // inferred from sequence or structural similarity /// 0048568 // embryonic organ development // inferred from sequence or structural similarity /// 0048608 // reproductive structure development // inferred from sequence or structural similarity /// 0048705 // skeletal system morphogenesis // traceable author statement /// 0048730 // epidermis morphogenesis // inferred from sequence or structural similarity /// 0048755 // branching morphogenesis of a nerve // inferred from sequence or structural similarity /// 0048762 // mesenchymal cell differentiation // inferred from sequence or structural similarity /// 0050679 // positive regulation of epithelial cell proliferation // inferred from sequence or structural similarity /// 0051150 // regulation of smooth muscle cell differentiation // inferred from sequence or structural similarity /// 0051781 // positive regulation of cell division // inferred from sequence or structural similarity /// 0055010 // ventricular cardiac muscle tissue morphogenesis // inferred from sequence or structural similarity /// 0060045 // positive regulation of cardiac muscle cell proliferation // inferred from sequence or structural similarity /// 0060174 // limb bud formation // inferred from sequence or structural similarity /// 0060348 // bone development // inferred from sequence or structural similarity /// 0060349 // bone morphogenesis // inferred from sequence or structural similarity /// 0060442 // branching involved in prostate gland morphogenesis // inferred from sequence or structural similarity /// 0060445 // branching involved in salivary gland morphogenesis // inferred from sequence or structural similarity /// 0060449 // bud elongation involved in lung branching // inferred from sequence or structural similarity /// 0060463 // lung lobe morphogenesis // inferred from sequence or structural similarity /// 0060484 // lung-associated mesenchyme development // inferred from sequence or structural similarity /// 0060501 // positive regulation of epithelial cell proliferation involved in lung morphogenesis // inferred from sequence or structural similarity /// 0060512 // prostate gland morphogenesis // inferred from sequence or structural similarity /// 0060523 // prostate epithelial cord elongation // inferred from sequence or structural similarity /// 0060527 // prostate epithelial cord arborization involved in prostate glandular acinus morphogenesis // inferred from sequence or structural similarity /// 0060529 // squamous basal epithelial stem cell differentiation involved in prostate gland acinus development // inferred from sequence or structural similarity /// 0060595 // fibroblast growth factor receptor signaling pathway involved in mammary gland specification // inferred from sequence or structural similarity /// 0060601 // lateral sprouting from an epithelium // inferred from sequence or structural similarity /// 0060615 // mammary gland bud formation // inferred from sequence or structural similarity /// 0060664 // epithelial cell proliferation involved in salivary gland morphogenesis // inferred from sequence or structural similarity /// 0060667 // branch elongation involved in salivary gland morphogenesis // inferred from sequence or structural similarity /// 0060670 // branching involved in labyrinthine layer morphogenesis // inferred from sequence or structural similarity /// 0060687 // regulation of branching involved in prostate gland morphogenesis // inferred from sequence or structural similarity /// 0060688 // regulation of morphogenesis of a branching structure // inferred from sequence or structural similarity /// 0060915 // mesenchymal cell differentiation involved in lung development // inferred from sequence or structural similarity /// 0060916 // mesenchymal cell proliferation involved in lung development // inferred from sequence or structural similarity /// 0070372 // regulation of ERK1 and ERK2 cascade // inferred from sequence or structural similarity /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from sequence or structural similarity /// 0090263 // positive regulation of canonical Wnt receptor signaling pathway // inferred from sequence or structural similarity","0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0005938 // cell cortex // inferred from direct assay /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from direct assay /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0060076 // excitatory synapse // inferred from sequence or structural similarity","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // non-traceable author statement /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005007 // fibroblast growth factor-activated receptor activity // inferred from direct assay /// 0005007 // fibroblast growth factor-activated receptor activity // inferred from physical interaction /// 0005007 // fibroblast growth factor-activated receptor activity // non-traceable author statement /// 0005007 // fibroblast growth factor-activated receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008201 // heparin binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0017134 // fibroblast growth factor binding // inferred from direct assay /// 0017134 // fibroblast growth factor binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction","chr10:123237844-123357973 (-) // 95.96 // q26.13"]
["11741656_a_at",-0.075917006,0.025249481,-0.10405874,0.12670827,0.15992618,-0.025249481,0.48522648,0.11559186,-1.1009156,-0.13870381,1.1009156,"down","SLCO1C1",53919.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0015721 // bile acid and bile salt transport // inferred from electronic annotation /// 0043252 // sodium-independent organic anion transport // traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation /// 0015125 // bile acid transmembrane transporter activity // inferred from electronic annotation","chr12:20848288-20906318 (+) // 96.11 // p12.2"]
["11755022_a_at",0.008090973,-0.008090973,0.0904398,-0.07007313,0.072434425,-0.03083992,0.7933666,0.49081758,1.027857,0.039639488,1.027857,"up","ARL6IP1",23204.0,"","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr16:18802990-18812866 (-) // 98.6 // p12.3"]
["11717816_at",0.028514862,0.058659554,-0.21555758,-0.014539719,0.014539719,-0.023822784,0.8966756,0.71099776,-1.0244528,-0.03485352,1.0244528,"down","ZBTB5",9925.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:37438108-37465452 (-) // 98.94 // p13.2"]
["11745805_a_at",0.03903532,0.005639553,-0.030004025,-0.005639553,-0.17380762,0.11442709,0.9235558,0.7726681,1.018583,0.026563628,1.018583,"up","AMMECR1L",83607.0,"","","","chr2:128619203-128643635 (-) // 96.73 // q14.3"]
["11749983_a_at",-0.13145256,-0.053673744,-0.13361645,0.053673744,0.071266174,0.08854103,0.13321671,0.0032423933,-1.1308502,-0.17740783,1.1308502,"down","SERPINB5",5268.0,"0002009 // morphogenesis of an epithelium // inferred from electronic annotation /// 0006928 // cellular component movement // traceable author statement /// 0010951 // negative regulation of endopeptidase activity // not recorded /// 0030162 // regulation of proteolysis // not recorded /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0050678 // regulation of epithelial cell proliferation // inferred from electronic annotation /// 0060512 // prostate gland morphogenesis // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0004867 // serine-type endopeptidase inhibitor activity // not recorded /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr18:61144194-61171020 (+) // 92.92 // q21.33"]
["11756561_a_at",-0.042485237,-0.049440384,-0.011920929,0.049024582,0.011920929,0.019816399,0.251915,0.018853622,-1.0435764,-0.061536167,1.0435764,"down","MED20",9477.0,"0006351 // transcription, DNA-dependent // non-traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0010467 // gene expression // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0016592 // mediator complex // non-traceable author statement /// 0016592 // mediator complex // inferred from electronic annotation","0001104 // RNA polymerase II transcription cofactor activity // inferred from electronic annotation /// 0003899 // DNA-directed RNA polymerase activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr6:41873092-41874670 (-) // 51.33 // p21.1"]
["11740248_s_at",0.016131878,0.011392117,-0.01139164,-0.0644145,0.055933475,-0.059404373,0.8111736,0.52452445,1.0196018,0.028005855,1.0196018,"up","SPAG1",6674.0,"0007338 // single fertilization // inferred from electronic annotation /// 0007338 // single fertilization // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr8:101170133-101254130 (+) // 94.22 // q22.2"]
["11748992_a_at",-0.023154736,0.07859182,-0.062485695,0.023154736,-0.1553402,0.0809021,0.956871,0.866998,1.0102729,0.014744997,1.0102729,"up","PFAS",5198.0,"0006144 // purine base metabolic process // traceable author statement /// 0006164 // purine nucleotide biosynthetic process // inferred from electronic annotation /// 0006189 // 'de novo' IMP biosynthetic process // inferred from electronic annotation /// 0006189 // 'de novo' IMP biosynthetic process // non-traceable author statement /// 0006541 // glutamine metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009168 // purine ribonucleoside monophosphate biosynthetic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement","0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004642 // phosphoribosylformylglycinamidine synthase activity // inferred from direct assay /// 0004642 // phosphoribosylformylglycinamidine synthase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation","chr17:8150935-8172675 (+) // 95.53 // p13.1"]
["11753306_a_at",-0.1299429,-0.008818626,0.16154742,-0.20795226,0.03378272,0.008818388,0.85294455,0.61209285,1.0444275,0.06271237,1.0444275,"up","EBF2",64641.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:25702124-25745432 (-) // 99.71 // p21.2"]
["11731079_s_at",-0.047670364,0.0527153,-0.017878532,0.017878532,-0.033214808,0.112763405,0.8083261,0.5194982,-1.025803,-0.036753654,1.025803,"down","HCAR1",27198.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0032355 // response to estradiol stimulus // inferred from direct assay","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation","chr12:123212152-123215129 (-) // 84.4 // q24.31"]
["11750802_x_at",-0.04674816,-0.0034499168,-0.04382372,0.03450203,0.08960152,0.0034499168,0.39086613,0.062370826,-1.0525279,-0.073858485,1.0525279,"down","LIMK2",3985.0,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0016310 // phosphorylation // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0042325 // regulation of phosphorylation // inferred from electronic annotation","0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005801 // cis-Golgi network // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr22:31608207-31674574 (+) // 99.91 // q12.2"]
["11746996_a_at",-0.0036525726,0.0036525726,-0.075020075,0.17439938,0.117954254,-0.051117897,0.60499376,0.21831545,-1.0758065,-0.10541861,1.0758065,"down","CCDC7",221016.0,"","","","chr10:32735314-32802192 (+) // 50.55 // p11.22"]
["11731532_at",0.024263859,-0.12569284,0.22573328,0.07465553,-0.052509308,-0.024263859,0.89988,0.7184034,1.0296404,0.042140618,1.0296404,"up","MTPAP",55149.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006378 // mRNA polyadenylation // inferred from direct assay /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0071044 // histone mRNA catabolic process // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from direct assay /// 0002134 // UTP binding // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0004652 // polynucleotide adenylyltransferase activity // inferred from direct assay /// 0004652 // polynucleotide adenylyltransferase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016779 // nucleotidyltransferase activity // inferred from electronic annotation /// 0030145 // manganese ion binding // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr10:30598730-30638269 (-) // 65.6 // p11.23"]
["11763363_x_at",0.05276966,-0.045899868,-0.15830946,-0.21784973,0.051454544,0.045899868,0.9777081,0.9283511,-1.0071753,-0.0103148455,1.0071753,"down","ZKSCAN5",23660.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016032 // viral reproduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:99102870-99132297 (+) // 84.09 // q22.1"]
["11717491_a_at",-0.022839546,-1.8310547E-4,1.8310547E-4,0.08199406,-0.0011472702,0.063575745,0.46098748,0.1016795,-1.0394022,-0.05575408,1.0394022,"down","DYNLRB1",83658.0,"0006810 // transport // inferred from electronic annotation /// 0007018 // microtubule-based movement // non-traceable author statement /// 0007632 // visual behavior // inferred from sequence or structural similarity","0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005868 // cytoplasmic dynein complex // inferred from sequence or structural similarity /// 0005868 // cytoplasmic dynein complex // non-traceable author statement /// 0005868 // cytoplasmic dynein complex // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0030286 // dynein complex // inferred from electronic annotation","0003774 // motor activity // inferred from electronic annotation /// 0003777 // microtubule motor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from electronic annotation","chr20:33104226-33128762 (+) // 75.48 // q11.22"]
["11756304_x_at",-0.018304825,-0.05214405,0.010903358,0.0064001083,0.03434372,-0.0064001083,0.6109134,0.22497325,-1.02193,-0.03129635,1.02193,"down","CSNK1A1",1452.0,"0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005847 // mRNA cleavage and polyadenylation specificity factor complex // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr5:148875616-148929890 (-) // 99.89 // q32"]
["11737853_at",-0.01703763,0.019619703,-0.052704573,0.01703763,0.17484379,-0.2534461,0.9932974,0.9774422,1.0026472,0.0038140009,1.0026472,"up","TNFSF18",8995.0,"0002309 // T cell proliferation involved in immune response // inferred from sequence or structural similarity /// 0002309 // T cell proliferation involved in immune response // inferred from electronic annotation /// 0006916 // anti-apoptosis // traceable author statement /// 0006955 // immune response // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0033209 // tumor necrosis factor-mediated signaling pathway // inferred from sequence or structural similarity /// 0033209 // tumor necrosis factor-mediated signaling pathway // inferred from electronic annotation /// 0042129 // regulation of T cell proliferation // inferred from sequence or structural similarity /// 0042129 // regulation of T cell proliferation // inferred from electronic annotation /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from sequence or structural similarity /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from electronic annotation","0005615 // extracellular space // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from sequence or structural similarity /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005102 // receptor binding // traceable author statement /// 0005125 // cytokine activity // inferred from electronic annotation /// 0005164 // tumor necrosis factor receptor binding // inferred from electronic annotation /// 0032813 // tumor necrosis factor receptor superfamily binding // inferred from sequence or structural similarity /// 0032813 // tumor necrosis factor receptor superfamily binding // inferred from electronic annotation","chr1:173009099-173020103 (-) // 99.55 // q25.1"]
["11720644_a_at",0.012667179,-0.054556847,-0.012667179,0.061698437,0.063705444,-0.1871531,0.99360156,0.97898847,1.0016632,0.0023975086,1.0016632,"up","PECAM1",5175.0,"0002576 // platelet degranulation // traceable author statement /// 0006909 // phagocytosis // inferred from direct assay /// 0006909 // phagocytosis // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008037 // cell recognition // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0050900 // leukocyte migration // traceable author statement /// 0050904 // diapedesis // inferred from direct assay /// 0072011 // glomerular endothelium development // inferred from expression pattern","0005615 // extracellular space // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0031092 // platelet alpha granule membrane // traceable author statement","0005515 // protein binding // inferred from physical interaction","chr17:62399863-62407083 (-) // 28.24 // q23.3"]
["11741010_a_at",0.0041046143,-0.022562027,0.053958893,-0.012968063,-0.0041046143,0.018575668,0.87713534,0.66537637,1.0078863,0.0113328835,1.0078863,"up","MFN2",9927.0,"0001825 // blastocyst formation // inferred from electronic annotation /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006626 // protein targeting to mitochondrion // inferred from direct assay /// 0007006 // mitochondrial membrane organization // inferred from direct assay /// 0007050 // cell cycle arrest // inferred from sequence or structural similarity /// 0007596 // blood coagulation // traceable author statement /// 0008053 // mitochondrial fusion // inferred from electronic annotation /// 0008053 // mitochondrial fusion // non-traceable author statement /// 0046580 // negative regulation of Ras protein signal transduction // inferred from direct assay /// 0048593 // camera-type eye morphogenesis // inferred from electronic annotation /// 0048662 // negative regulation of smooth muscle cell proliferation // inferred from sequence or structural similarity /// 0051646 // mitochondrion localization // inferred from direct assay","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // traceable author statement /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0015630 // microtubule cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031306 // intrinsic to mitochondrial outer membrane // inferred from sequence or structural similarity","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction","chr1:12040237-12073571 (+) // 99.78 // p36.22"]
["11745736_a_at",-0.061172485,-0.13647175,-0.08815098,0.14231682,0.061172485,0.0930891,0.14187962,0.003851242,-1.1440297,-0.19412455,1.1440297,"down","ACADVL",37.0,"0001659 // temperature homeostasis // inferred from sequence or structural similarity /// 0001659 // temperature homeostasis // inferred from electronic annotation /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006635 // fatty acid beta-oxidation // traceable author statement /// 0006635 // fatty acid beta-oxidation // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0015980 // energy derivation by oxidation of organic compounds // traceable author statement /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0033539 // fatty acid beta-oxidation using acyl-CoA dehydrogenase // inferred from sequence or structural similarity /// 0033539 // fatty acid beta-oxidation using acyl-CoA dehydrogenase // inferred from electronic annotation /// 0042760 // very long-chain fatty acid catabolic process // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045717 // negative regulation of fatty acid biosynthetic process // inferred from sequence or structural similarity /// 0045717 // negative regulation of fatty acid biosynthetic process // inferred from electronic annotation /// 0046322 // negative regulation of fatty acid oxidation // inferred from sequence or structural similarity /// 0046322 // negative regulation of fatty acid oxidation // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0090181 // regulation of cholesterol metabolic process // inferred from sequence or structural similarity /// 0090181 // regulation of cholesterol metabolic process // inferred from electronic annotation","0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0042645 // mitochondrial nucleoid // inferred from direct assay","0000062 // fatty-acyl-CoA binding // inferred from electronic annotation /// 0003995 // acyl-CoA dehydrogenase activity // traceable author statement /// 0003995 // acyl-CoA dehydrogenase activity // inferred from electronic annotation /// 0004466 // long-chain-acyl-CoA dehydrogenase activity // traceable author statement /// 0004466 // long-chain-acyl-CoA dehydrogenase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016627 // oxidoreductase activity, acting on the CH-CH group of donors // inferred from electronic annotation /// 0017099 // very-long-chain-acyl-CoA dehydrogenase activity // inferred from electronic annotation /// 0050660 // flavin adenine dinucleotide binding // inferred from electronic annotation","chr17:7123155-7128584 (+) // 90.38 // p13.1"]
["11731422_s_at",-0.05426097,-0.17698908,0.14065576,0.06103182,0.05426097,-0.12454915,0.9397281,0.8185023,-1.0189707,-0.027112607,1.0189707,"down","FCGR3A",2214.0,"0006955 // immune response // traceable author statement /// 0050776 // regulation of immune response // traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009897 // external side of plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0019864 // IgG binding // inferred from electronic annotation","chr1:161511552-161519893 (-) // 92.83 // q23.3 /// chr1:161592989-161601252 (-) // 91.06 // q23.3"]
["11720429_at",-0.08847332,-0.12878847,-0.013655663,0.09877062,0.013655663,0.05684471,0.31004676,0.03300791,-1.0968727,-0.13339609,1.0968727,"down","CDC40",51362.0,"0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0031124 // mRNA 3'-end processing // traceable author statement /// 0051301 // cell division // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // traceable author statement /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay","","chr6:110501623-110553435 (+) // 91.14 // q21"]
["11717796_a_at",0.023815155,-0.067507744,0.053726196,-0.023815155,-0.053041458,0.09897518,0.98502016,0.94897,-1.0027962,-0.0040283957,1.0027962,"down","ZDHHC3",51304.0,"0006605 // protein targeting // inferred from electronic annotation /// 0018345 // protein palmitoylation // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0016409 // palmitoyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:44956752-45017674 (-) // 82.2 // p21.31"]
["11730881_a_at",0.06612778,0.12741661,-0.07591367,0.19486403,-0.06612778,-0.1410079,0.9059287,0.73283345,1.0304688,0.043300852,1.0304688,"up","NEBL",10529.0,"0071691 // cardiac muscle thin filament assembly // inferred from mutant phenotype","0001725 // stress fiber // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0030018 // Z disc // inferred from direct assay /// 0031674 // I band // non-traceable author statement","0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005523 // tropomyosin binding // inferred from physical interaction /// 0008092 // cytoskeletal protein binding // inferred from direct assay /// 0008092 // cytoskeletal protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008307 // structural constituent of muscle // non-traceable author statement /// 0031005 // filamin binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051015 // actin filament binding // inferred from direct assay","chr10:21068904-21186531 (-) // 98.58 // p12.31"]
["11733584_a_at",0.08176327,-0.08176327,0.25964355,-0.09695768,-0.21326256,0.09195089,0.6682372,0.2964081,1.1167485,0.15930425,1.1167485,"up","TM4SF19 /// TM4SF19-TCTEX1D2","100534611 /// 116211","","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr3:196050418-196065258 (-) // 92.6 // q29"]
["11754532_a_at",0.10679293,0.12094116,-0.017206192,0.017206192,-0.167305,-0.03423834,0.5104099,0.13463989,1.0955244,0.13162166,1.0955244,"up","C1orf127",148345.0,"","","","chr1:11006531-11009808 (-) // 86.34 // p36.22"]
["11761633_a_at",0.020139933,0.12375808,-0.08208847,-0.020092487,-0.10148549,0.020092487,0.78669107,0.4764281,1.03845,0.05443176,1.03845,"up","SLC37A3",84255.0,"0006810 // transport // inferred from electronic annotation /// 0008643 // carbohydrate transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation","chr7:140051319-140098304 (-) // 92.27 // q34"]
["11723735_a_at",-0.0145430565,-0.03569889,0.053123474,0.031968594,-0.038372993,0.014543533,0.98839736,0.9615096,-1.0012155,-0.0017524703,1.0012155,"down","RNF216",54476.0,"0006915 // apoptotic process // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0032648 // regulation of interferon-beta production // inferred from direct assay /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0050691 // regulation of defense response to virus by host // inferred from direct assay /// 0070936 // protein K48-linked ubiquitination // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:5659263-5821370 (-) // 95.23 // p22.1"]
["11728001_a_at",0.062149525,0.013730526,-0.13965654,0.08343458,-0.050430298,-0.013730526,0.90173507,0.7229523,-1.019374,-0.02768348,1.019374,"down","TMEM114",283953.0,"","0005886 // plasma membrane // inferred from electronic annotation /// 0005923 // tight junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005198 // structural molecule activity // inferred from electronic annotation","chr16:8619502-8622226 (-) // 67.05 // p13.2"]
["11721564_a_at",-0.048793793,0.1241467,-0.20743966,-0.04412818,0.12904835,0.044128418,0.77989966,0.46550828,-1.0621924,-0.08704516,1.0621924,"down","PLA2G4C",8605.0,"0006644 // phospholipid metabolic process // traceable author statement /// 0006954 // inflammatory response // non-traceable author statement /// 0007567 // parturition // non-traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0009395 // phospholipid catabolic process // inferred from electronic annotation /// 0016042 // lipid catabolic process // inferred from electronic annotation /// 0019369 // arachidonic acid metabolic process // non-traceable author statement /// 0035556 // intracellular signal transduction // non-traceable author statement /// 0046475 // glycerophospholipid catabolic process // inferred from direct assay","0005622 // intracellular // non-traceable author statement /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0004620 // phospholipase activity // inferred from electronic annotation /// 0004623 // phospholipase A2 activity // inferred from electronic annotation /// 0005543 // phospholipid binding // non-traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0047499 // calcium-independent phospholipase A2 activity // inferred from direct assay","chr19:48551099-48614109 (-) // 91.89 // q13.33"]
["11723556_x_at",-0.024962902,0.024962425,0.31481266,-0.07785559,0.03898859,-0.033042908,0.6791147,0.31105843,1.0934652,0.12890732,1.0934652,"up","DCAF16",54876.0,"0016567 // protein ubiquitination // inferred by curator /// 0016567 // protein ubiquitination // inferred from electronic annotation","0080008 // CUL4-RING ubiquitin ligase complex // inferred from direct assay","","chr4:17802277-17812381 (-) // 80.07 // p15.31"]
["11724699_a_at",0.07310963,-0.0027155876,-0.15233803,-0.095211506,0.0027155876,0.01704216,0.9934531,0.9783813,-1.0015007,-0.0021634665,1.0015007,"down","ARHGEF37",389337.0,"0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation","chr5:148961005-149014531 (+) // 86.01 // q32"]
["11744024_a_at",-0.062018394,-0.061627388,-0.019640923,0.042726517,0.030266762,0.019640923,0.17682,0.0072164293,-1.0560223,-0.07864028,1.0560223,"down","MARS",4141.0,"0006412 // translation // inferred from electronic annotation /// 0006418 // tRNA aminoacylation for protein translation // traceable author statement /// 0006418 // tRNA aminoacylation for protein translation // inferred from electronic annotation /// 0006431 // methionyl-tRNA aminoacylation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000049 // tRNA binding // inferred from electronic annotation /// 0000166 // nucleotide binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0004812 // aminoacyl-tRNA ligase activity // inferred from electronic annotation /// 0004825 // methionine-tRNA ligase activity // traceable author statement /// 0004825 // methionine-tRNA ligase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation","chr12:57881689-57910432 (+) // 90.27 // q13.3"]
["11731890_a_at",-0.0075087547,-0.17176628,0.032081604,-0.052369595,0.0075087547,0.081097126,0.7705799,0.4515553,-1.0432922,-0.061143227,1.0432922,"down","ADAMTS16",170690.0,"0006508 // proteolysis // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from electronic annotation","0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr5:5140442-5320412 (+) // 99.86 // p15.32"]
["11758413_s_at",0.04991722,0.052248,-0.08345127,0.029045343,-0.029045343,-0.03206134,0.91225964,0.74748224,1.0118006,0.016925067,1.0118006,"up","ZC3H12B",340554.0,"0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation","","0003676 // nucleic acid binding // inferred from electronic annotation /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004519 // endonuclease activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chrX:64727183-64727714 (+) // 98.13 // q12"]
["11716948_s_at",-0.012740135,-0.01854229,0.12716389,0.010555267,0.028933525,-0.010555267,0.8801877,0.6722945,1.0155885,0.022315994,1.0155885,"up","TM9SF3",56889.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005488 // binding // inferred from direct assay","chr10:98277867-98346797 (-) // 96.48 // q24.1"]
["11763989_at",0.13734674,0.12879467,-0.04157281,-0.0043935776,0.004393339,-0.034912825,0.60577744,0.21952607,1.0617867,0.08649391,1.0617867,"up","LOC100506582",1.00506582E8,"","","","chr17:29598768-29600037 (-) // 97.4 // q11.2"]
["11734054_a_at",0.020810604,-0.020810127,0.0260396,0.028943062,-0.11042786,-0.06814051,0.63283175,0.25257853,1.0414222,0.05855513,1.0414222,"up","ZMYM6",9204.0,"0007010 // cytoskeleton organization // inferred from mutant phenotype /// 0007275 // multicellular organismal development // traceable author statement /// 0022604 // regulation of cell morphogenesis // inferred from mutant phenotype","0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:35451768-35497715 (-) // 65.22 // p34.3"]
["11756587_a_at",-0.098338604,-0.12438917,-0.026982307,0.11934137,0.026982307,0.089921,0.23442584,0.015315157,-1.1188254,-0.16198495,1.1188254,"down","PTGDS",5730.0,"0001516 // prostaglandin biosynthetic process // inferred from direct assay /// 0001516 // prostaglandin biosynthetic process // inferred from sequence or structural similarity /// 0001516 // prostaglandin biosynthetic process // inferred from electronic annotation /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0006810 // transport // inferred from sequence or structural similarity /// 0006810 // transport // inferred from electronic annotation /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0045187 // regulation of circadian sleep/wake cycle, sleep // inferred from sequence or structural similarity /// 0045187 // regulation of circadian sleep/wake cycle, sleep // inferred from electronic annotation /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation","0005576 // extracellular region // inferred from direct assay /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005791 // rough endoplasmic reticulum // inferred from direct assay /// 0005791 // rough endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from sequence or structural similarity /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0004667 // prostaglandin-D synthase activity // inferred from direct assay /// 0004667 // prostaglandin-D synthase activity // inferred from sequence or structural similarity /// 0004667 // prostaglandin-D synthase activity // inferred from electronic annotation /// 0004667 // prostaglandin-D synthase activity // traceable author statement /// 0005215 // transporter activity // inferred from sequence or structural similarity /// 0005215 // transporter activity // inferred from electronic annotation /// 0005501 // retinoid binding // inferred from sequence or structural similarity /// 0005501 // retinoid binding // inferred from electronic annotation /// 0005504 // fatty acid binding // inferred from direct assay /// 0016853 // isomerase activity // inferred from electronic annotation /// 0036094 // small molecule binding // inferred from electronic annotation","chr9:139871956-139876191 (+) // 99.24 // q34.3"]
["11755435_a_at",0.14326906,0.06619024,-0.06619024,-0.17666054,-0.1430583,0.121810436,0.7198934,0.3691503,1.082019,0.1137258,1.082019,"up","POLI",11201.0,"0006260 // DNA replication // inferred from electronic annotation /// 0006281 // DNA repair // inferred from electronic annotation /// 0006281 // DNA repair // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation","0005622 // intracellular // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003684 // damaged DNA binding // inferred from electronic annotation /// 0003887 // DNA-directed DNA polymerase activity // inferred from electronic annotation /// 0003887 // DNA-directed DNA polymerase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016740 // transferase activity // inferred from electronic annotation /// 0016779 // nucleotidyltransferase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr18:51795938-51821092 (+) // 98.18 // q21.2"]
["11753082_a_at",0.001737833,-0.10441947,-0.16567111,0.10506487,-0.001737833,0.001737833,0.47075614,0.10734136,-1.0901091,-0.12447254,1.0901091,"down","ZDHHC15",158866.0,"0016188 // synaptic vesicle maturation // inferred from electronic annotation /// 0018345 // protein palmitoylation // inferred from electronic annotation /// 0045184 // establishment of protein localization // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0016409 // palmitoyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chrX:74670154-74743258 (-) // 70.48 // q13.3"]
["11723743_a_at",-0.11845827,0.0729146,-0.42320824,-0.025299072,0.05043459,0.025299072,0.67252827,0.30196035,-1.127449,-0.17306222,1.127449,"down","CADM3",57863.0,"0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from sequence or structural similarity /// 0007157 // heterophilic cell-cell adhesion // inferred from sequence or structural similarity /// 0034329 // cell junction assembly // traceable author statement /// 0034332 // adherens junction organization // traceable author statement /// 0045216 // cell-cell junction organization // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","0042803 // protein homodimerization activity // inferred from sequence or structural similarity","chr1:159141376-159173589 (+) // 97.89 // q23.2"]
["11722598_s_at",-0.1030941,-0.18088007,-0.09287071,0.12605667,0.09287071,0.1737113,0.11455932,0.002131438,-1.1945726,-0.2564945,1.1945726,"down","CXCR7",57007.0,"0007155 // cell adhesion // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0070098 // chemokine-mediated signaling pathway // inferred from mutant phenotype","0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0055037 // recycling endosome // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0016494 // C-X-C chemokine receptor activity // inferred from mutant phenotype","chr2:237476447-237491001 (+) // 93.98 // q37.3"]
["11734018_at",0.053554535,0.02205038,-0.022050858,-0.06123829,-0.022141933,0.08880615,0.9197592,0.76439714,1.0111821,0.016042788,1.0111821,"up","URB1",9875.0,"","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // non-traceable author statement /// 0005730 // nucleolus // inferred from electronic annotation","","chr21:33683329-33765312 (-) // 94.01 // q22.11"]
["11756885_a_at",-0.018785477,0.022390366,0.15498447,0.007900238,-0.007900238,-0.061475754,0.6420836,0.26378146,1.0521606,0.07335496,1.0521606,"up","ATAD2",29028.0,"0006200 // ATP catabolic process // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation","chr8:124332741-124428590 (-) // 97.31 // q24.13"]
["11722023_a_at",0.025188446,-0.013284683,0.10277939,0.013284683,-0.055339813,-0.0224514,0.59152067,0.20474195,1.0422707,0.05972997,1.0422707,"up","ABCF2",10061.0,"0006200 // ATP catabolic process // inferred from electronic annotation /// 0006810 // transport // traceable author statement","0005739 // mitochondrion // inferred from electronic annotation /// 0005740 // mitochondrial envelope // traceable author statement /// 0043190 // ATP-binding cassette (ABC) transporter complex // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0005215 // transporter activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0005524 // ATP binding // traceable author statement /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation","chr7:150909140-150924666 (-) // 81.12 // q36.1"]
["11758030_s_at",0.12739563,0.06315708,-0.06315708,-0.07158494,-0.18674135,0.11955595,0.7680882,0.4473461,1.0634277,0.08872193,1.0634277,"up","FOXG1",2290.0,"0002052 // positive regulation of neuroblast proliferation // not recorded /// 0002052 // positive regulation of neuroblast proliferation // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007346 // regulation of mitotic cell cycle // not recorded /// 0007346 // regulation of mitotic cell cycle // inferred from electronic annotation /// 0007420 // brain development // traceable author statement /// 0009792 // embryo development ending in birth or egg hatching // not recorded /// 0009888 // tissue development // not recorded /// 0009953 // dorsal/ventral pattern formation // not recorded /// 0009953 // dorsal/ventral pattern formation // inferred from electronic annotation /// 0016199 // axon midline choice point recognition // not recorded /// 0016199 // axon midline choice point recognition // inferred from electronic annotation /// 0021954 // central nervous system neuron development // not recorded /// 0021954 // central nervous system neuron development // inferred from electronic annotation /// 0022008 // neurogenesis // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation /// 0030902 // hindbrain development // not recorded /// 0035058 // nonmotile primary cilium assembly // not recorded /// 0042472 // inner ear morphogenesis // not recorded /// 0042472 // inner ear morphogenesis // inferred from electronic annotation /// 0043584 // nose development // not recorded /// 0045665 // negative regulation of neuron differentiation // not recorded /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0045787 // positive regulation of cell cycle // not recorded /// 0045787 // positive regulation of cell cycle // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // not recorded /// 0048667 // cell morphogenesis involved in neuron differentiation // inferred from electronic annotation /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // not recorded","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // not recorded","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // not recorded /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // not recorded /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // not recorded /// 0008301 // DNA binding, bending // not recorded /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr14:29238380-29238872 (+) // 100.0 // q12"]
["11729093_a_at",-0.0044546127,0.012537956,0.05129385,0.004454136,-0.09815645,-0.113815784,0.44710973,0.09352238,1.063607,0.08896515,1.063607,"up","IGF2-AS",51214.0,"","","","chr11:2161736-2169894 (+) // 97.92 // p15.5"]
["11720182_at",0.0065927505,-0.015054703,-0.011871338,0.04662609,-0.0065927505,0.022717476,0.55978286,0.17467324,-1.019382,-0.027694784,1.019382,"down","SMG8",55181.0,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // inferred from mutant phenotype /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0045859 // regulation of protein kinase activity // inferred from mutant phenotype","0005829 // cytosol // traceable author statement","0005515 // protein binding // inferred from physical interaction","chr17:57286763-57292611 (+) // 95.46 // q22"]
["11763237_x_at",0.043565035,0.090163946,0.07303691,-0.05072689,-0.043565035,-0.05475402,0.09206446,0.0010629558,1.0856838,0.11860401,1.0856838,"up","IGLC1",3537.0,"0006955 // immune response // non-traceable author statement /// 0006956 // complement activation // traceable author statement /// 0006958 // complement activation, classical pathway // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0050776 // regulation of immune response // traceable author statement","0005576 // extracellular region // traceable author statement /// 0005886 // plasma membrane // traceable author statement","0003823 // antigen binding // non-traceable author statement /// 0003823 // antigen binding // inferred from electronic annotation","chr22:22758538-23248589 (+) // 86.37 // q11.22"]
["11759866_at",-0.06347513,0.06347489,0.2623422,0.112968445,-0.19145727,-0.09114528,0.6940988,0.33154938,1.1049584,0.14399207,1.1049584,"up","","","","","","chr3:107673315-107751108 (-) // 57.35 // q13.12"]
["11740257_a_at",0.12246227,-0.17392254,0.10751486,0.017234802,-0.13775253,-0.017234802,0.83719474,0.5793862,1.0457966,0.06460233,1.0457966,"up","CXorf23",256643.0,"","0005739 // mitochondrion // inferred from electronic annotation","","chrX:19931692-19984769 (-) // 74.51 // p22.12"]
["11753532_a_at",-0.020138979,0.13166523,-0.017870903,-0.0675478,0.08652353,0.017870903,0.9300768,0.79192567,1.0132121,0.018936189,1.0132121,"up","KCNIP3",30818.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007610 // behavior // inferred from electronic annotation /// 0019233 // sensory perception of pain // inferred from electronic annotation /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0043523 // regulation of neuron apoptotic process // inferred from electronic annotation /// 0048265 // response to pain // inferred from electronic annotation /// 0071805 // potassium ion transmembrane transport // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0003714 // transcription corepressor activity // traceable author statement /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005267 // potassium channel activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005509 // calcium ion binding // traceable author statement /// 0008022 // protein C-terminus binding // inferred from electronic annotation /// 0048306 // calcium-dependent protein binding // inferred from electronic annotation","chr2:95976100-96049797 (+) // 97.87 // q11.1"]
["11730584_a_at",-0.023240328,-0.017876148,0.017876387,-0.049218893,0.16973734,0.022701263,0.7673541,0.44601145,-1.0392096,-0.055486668,1.0392096,"down","ABCG4",64137.0,"0006200 // ATP catabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0033344 // cholesterol efflux // traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0017127 // cholesterol transporter activity // traceable author statement /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from physical interaction","chr11:119019721-119033367 (+) // 96.9 // q23.3"]
["11746151_x_at",-0.16963434,-0.1535778,0.046535015,-0.046535015,0.11967564,0.110883236,0.5392197,0.15605113,-1.1123163,-0.15356703,1.1123163,"down","BMS1P4",729096.0,"0006184 // GTP catabolic process // inferred from electronic annotation /// 0042254 // ribosome biogenesis // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation","chr10:75461120-75490263 (-) // 77.69 // q22.2"]
["11743322_at",0.028612137,0.033878326,0.0785408,-0.05906868,-0.046055794,-0.028612137,0.1768606,0.0072219423,1.0655433,0.09158921,1.0655433,"up","C20orf111",51526.0,"","","","chr20:42824582-42839579 (-) // 79.96 // q13.12"]
["11717958_s_at",0.009305954,-0.05227709,0.07648182,-0.079939365,0.07995176,-0.009305954,0.940975,0.8218363,1.009939,0.014268093,1.009939,"up","PATL1",219988.0,"0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0000290 // deadenylation-dependent decapping of nuclear-transcribed mRNA // inferred from direct assay /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0033962 // cytoplasmic mRNA processing body assembly // inferred from direct assay /// 0043928 // exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay // traceable author statement","0000932 // cytoplasmic mRNA processing body // inferred from direct assay /// 0000932 // cytoplasmic mRNA processing body // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0030014 // CCR4-NOT complex // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0003723 // RNA binding // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008266 // poly(U) RNA binding // inferred from direct assay /// 0034046 // poly(G) RNA binding // inferred from direct assay","chr11:59404188-59436640 (-) // 94.03 // q12.1"]
["AFFX-BkGr-GC14_at",-2.7251244E-4,0.00938797,-0.020400047,-0.0061814785,0.009576559,2.7251244E-4,0.86545885,0.6409424,-1.0034606,-0.0049840375,1.0034606,"down",-0.0061814785,0.009576559,2.7251244E-4,-2.7251244E-4,0.00938797,-0.020400047]
["11762922_s_at",-0.0031194687,0.019241333,-0.030956268,-0.001540184,0.029660225,0.001540184,0.7677589,0.44656068,-1.0103334,-0.014831473,1.0103334,"down","COX3 /// MYBPC3 /// SLC12A1","4514 /// 4607 /// 6557","0001657 // ureteric bud development // inferred from electronic annotation /// 0001822 // kidney development // inferred from electronic annotation /// 0002027 // regulation of heart rate // inferred from electronic annotation /// 0002043 // blood vessel endothelial cell proliferation involved in sprouting angiogenesis // inferred from direct assay /// 0003007 // heart morphogenesis // inferred from mutant phenotype /// 0003007 // heart morphogenesis // inferred from electronic annotation /// 0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0006821 // chloride transport // inferred from electronic annotation /// 0006936 // muscle contraction // inferred from electronic annotation /// 0006942 // regulation of striated muscle contraction // inferred from sequence or structural similarity /// 0006942 // regulation of striated muscle contraction // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007588 // excretion // inferred from electronic annotation /// 0008016 // regulation of heart contraction // inferred from electronic annotation /// 0010594 // regulation of endothelial cell migration // inferred from direct assay /// 0030049 // muscle filament sliding // traceable author statement /// 0030514 // negative regulation of BMP signaling pathway // inferred from electronic annotation /// 0030514 // negative regulation of BMP signaling pathway // traceable author statement /// 0031034 // myosin filament assembly // inferred from electronic annotation /// 0032781 // positive regulation of ATPase activity // inferred from sequence or structural similarity /// 0032971 // regulation of muscle filament sliding // inferred from sequence or structural similarity /// 0034220 // ion transmembrane transport // inferred from sequence or structural similarity /// 0034220 // ion transmembrane transport // inferred from electronic annotation /// 0042118 // endothelial cell activation // inferred from direct assay /// 0045214 // sarcomere organization // inferred from electronic annotation /// 0048839 // inner ear development // inferred from electronic annotation /// 0048878 // chemical homeostasis // inferred from electronic annotation /// 0055010 // ventricular cardiac muscle tissue morphogenesis // inferred from mutant phenotype /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0060048 // cardiac muscle contraction // inferred from sequence or structural similarity /// 0060048 // cardiac muscle contraction // inferred from electronic annotation /// 0060393 // regulation of pathway-restricted SMAD protein phosphorylation // inferred from direct assay /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from direct assay","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005624 // membrane fraction // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005863 // striated muscle myosin thick filament // inferred from direct assay /// 0005863 // striated muscle myosin thick filament // inferred from sequence or structural similarity /// 0005863 // striated muscle myosin thick filament // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0014705 // C zone // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0030016 // myofibril // inferred from electronic annotation /// 0030017 // sarcomere // inferred from direct assay /// 0030017 // sarcomere // inferred from electronic annotation /// 0031672 // A band // inferred from direct assay /// 0031672 // A band // inferred from electronic annotation /// 0032982 // myosin filament // inferred from electronic annotation","0001671 // ATPase activator activity // inferred from sequence or structural similarity /// 0003779 // actin binding // inferred from electronic annotation /// 0005215 // transporter activity // inferred from electronic annotation /// 0008307 // structural constituent of muscle // inferred from mutant phenotype /// 0008511 // sodium:potassium:chloride symporter activity // inferred from electronic annotation /// 0008511 // sodium:potassium:chloride symporter activity // traceable author statement /// 0015075 // ion transmembrane transporter activity // inferred from electronic annotation /// 0015293 // symporter activity // inferred from electronic annotation /// 0015377 // cation:chloride symporter activity // inferred from electronic annotation /// 0017022 // myosin binding // inferred from direct assay /// 0031432 // titin binding // non-traceable author statement /// 0032036 // myosin heavy chain binding // inferred from physical interaction /// 0032036 // myosin heavy chain binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chrM:9034-9988 (+) // 92.91 //"]
["11738996_a_at",0.060777664,0.026761055,0.1548605,-0.08182144,-0.026761055,-0.102511406,0.28817067,0.027319822,1.1104653,0.1511643,1.1104653,"up","DPYSL2",1808.0,"0001975 // response to amphetamine // inferred from electronic annotation /// 0006139 // nucleobase-containing compound metabolic process // traceable author statement /// 0006208 // pyrimidine base catabolic process // inferred from electronic annotation /// 0007010 // cytoskeleton organization // inferred from sequence or structural similarity /// 0007010 // cytoskeleton organization // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007420 // brain development // inferred from electronic annotation /// 0014049 // positive regulation of glutamate secretion // inferred from electronic annotation /// 0021510 // spinal cord development // inferred from electronic annotation /// 0021772 // olfactory bulb development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0042220 // response to cocaine // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0045664 // regulation of neuron differentiation // inferred from electronic annotation /// 0048489 // synaptic vesicle transport // inferred from electronic annotation","0005625 // soluble fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0030426 // growth cone // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043195 // terminal button // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0004157 // dihydropyrimidinase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016810 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds // inferred from electronic annotation /// 0016812 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation","chr8:26435420-26515691 (+) // 88.56 // p21.2"]
["11723222_s_at",0.16672158,0.021220684,-0.14099813,-0.23235917,-0.021220446,0.12527871,0.88794404,0.6910405,1.0413212,0.058415085,1.0413212,"up","MYOT",9499.0,"0006936 // muscle contraction // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030018 // Z disc // inferred from electronic annotation /// 0042383 // sarcolemma // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008307 // structural constituent of muscle // traceable author statement","chr5:137203479-137223540 (+) // 96.92 // q31.2"]
["11744630_a_at",0.03836012,-0.1776762,0.08566475,-0.03836012,-0.09100294,0.17594671,0.9281503,0.78592,-1.0234295,-0.03341174,1.0234295,"down","NXPE3",91775.0,"","0005576 // extracellular region // inferred from electronic annotation","","chr3:101500549-101541667 (+) // 96.28 // q12.3"]
["11741130_a_at",0.05264616,-0.16742325,0.123698235,-0.07405949,0.09839344,-0.05264616,0.97157186,0.90996575,1.0086398,0.012411077,1.0086398,"up","NLGN4X",57502.0,"0003360 // brainstem development // inferred from sequence or structural similarity /// 0007155 // cell adhesion // inferred from electronic annotation /// 0021549 // cerebellum development // inferred from sequence or structural similarity /// 0035176 // social behavior // inferred from mutant phenotype /// 0045216 // cell-cell junction organization // non-traceable author statement /// 0046622 // positive regulation of organ growth // inferred from sequence or structural similarity /// 0050808 // synapse organization // inferred from mutant phenotype /// 0050808 // synapse organization // non-traceable author statement /// 0071625 // vocalization behavior // inferred from mutant phenotype /// 0071625 // vocalization behavior // inferred from sequence or structural similarity /// 0090394 // negative regulation of excitatory postsynaptic membrane potential // inferred from direct assay /// 0097105 // presynaptic membrane assembly // inferred from direct assay","0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0009986 // cell surface // inferred from direct assay /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030425 // dendrite // inferred from direct assay /// 0045202 // synapse // not recorded /// 0045202 // synapse // inferred from sequence or structural similarity /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation /// 0060076 // excitatory synapse // inferred from direct assay","0004091 // carboxylesterase activity // not recorded /// 0004872 // receptor activity // not recorded /// 0005515 // protein binding // inferred from physical interaction /// 0031404 // chloride ion binding // inferred from direct assay /// 0042043 // neurexin family protein binding // inferred from direct assay /// 0042043 // neurexin family protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay","chrX:5808084-6147086 (-) // 97.39 // p22.32"]
["11729155_at",-0.048997402,-0.19786716,0.08689451,-0.19606256,0.048997402,0.15845513,0.8878206,0.69016737,-1.0403868,-0.057119995,1.0403868,"down","CEACAM6",4680.0,"0007165 // signal transduction // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0031225 // anchored to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr19:42254884-42275774 (+) // 51.02 // q13.2"]
["11716214_a_at",-0.00800705,-0.039628983,0.0015363693,-0.0015363693,0.04155636,0.025798798,0.46287665,0.10273341,-1.0261959,-0.037306145,1.0261959,"down","PRPF3",9129.0,"0000375 // RNA splicing, via transesterification reactions // traceable author statement /// 0000398 // nuclear mRNA splicing, via spliceosome // non-traceable author statement /// 0006397 // mRNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005681 // spliceosomal complex // non-traceable author statement /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0015030 // Cajal body // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr1:150293916-150325671 (+) // 95.42 // q21.2"]
["11762866_at",-0.005262375,0.0052626133,0.051481962,-0.16442442,0.023424625,-0.13357687,0.52905184,0.14793614,1.078246,0.10868636,1.078246,"up","LINC00476",1.00128782E8,"","","","chr9:98521510-98637762 (-) // 68.4 // q22.32"]
["11762388_at",-0.044668674,-0.42747307,-0.0025749207,0.27522612,0.0025749207,0.19201279,0.48594528,0.116095856,-1.2438767,-0.31484348,1.2438767,"down","ZNF280D",54816.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr15:56944687-56999506 (-) // 95.47 // q21.3"]
["11747835_a_at",0.0060663223,0.044137,0.12835884,-0.05053711,-0.036816597,-0.0060663223,0.4216753,0.07783616,1.0648577,0.09066068,1.0648577,"up","FUBP1",8880.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0010628 // positive regulation of gene expression // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003697 // single-stranded DNA binding // traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation","chr1:78414838-78444794 (-) // 93.78 // p31.1"]
["11759758_at",-0.028243542,-0.10612965,-0.20553923,0.042111397,0.06634712,0.028244019,0.33003405,0.03892976,-1.1164136,-0.15887159,1.1164136,"down","LOC339803",339803.0,"","","","chr2:61368324-61372110 (-) // 35.7 // p15"]
["11721750_at",0.038499355,5.7554245E-4,-5.7554245E-4,-0.21472883,0.0540514,-0.060846806,0.6959952,0.33372074,1.0619196,0.0866745,1.0619196,"up","FZD7",8324.0,"0001944 // vasculature development // not recorded /// 0006355 // regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007199 // G-protein coupled receptor signaling pathway coupled to cGMP nucleotide second messenger // not recorded /// 0007223 // Wnt receptor signaling pathway, calcium modulating pathway // not recorded /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007409 // axonogenesis // not recorded /// 0007420 // brain development // not recorded /// 0008406 // gonad development // not recorded /// 0010812 // negative regulation of cell-substrate adhesion // inferred from mutant phenotype /// 0014834 // satellite cell maintenance involved in skeletal muscle regeneration // inferred from electronic annotation /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0019827 // stem cell maintenance // inferred from mutant phenotype /// 0030182 // neuron differentiation // inferred from sequence or structural similarity /// 0033077 // T cell differentiation in thymus // inferred from electronic annotation /// 0034446 // substrate adhesion-dependent cell spreading // inferred from electronic annotation /// 0035412 // regulation of catenin import into nucleus // inferred from mutant phenotype /// 0035567 // non-canonical Wnt receptor signaling pathway // inferred from electronic annotation /// 0038031 // non-canonical Wnt receptor signaling pathway via JNK cascade // inferred from mutant phenotype /// 0042327 // positive regulation of phosphorylation // inferred from direct assay /// 0042666 // negative regulation of ectodermal cell fate specification // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0046330 // positive regulation of JNK cascade // inferred by curator /// 0048103 // somatic stem cell division // inferred from electronic annotation /// 0060054 // positive regulation of epithelial cell proliferation involved in wound healing // inferred from mutant phenotype /// 0060070 // canonical Wnt receptor signaling pathway // inferred from direct assay /// 0060070 // canonical Wnt receptor signaling pathway // inferred from mutant phenotype /// 0060070 // canonical Wnt receptor signaling pathway // inferred from electronic annotation /// 0060231 // mesenchymal to epithelial transition // inferred from mutant phenotype /// 0071300 // cellular response to retinoic acid // inferred from sequence or structural similarity","0005737 // cytoplasm // not recorded /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0032589 // neuron projection membrane // not recorded /// 0045177 // apical part of cell // not recorded","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0017147 // Wnt-protein binding // inferred from physical interaction /// 0017147 // Wnt-protein binding // inferred from electronic annotation /// 0030165 // PDZ domain binding // inferred from physical interaction /// 0042813 // Wnt-activated receptor activity // not recorded /// 0042813 // Wnt-activated receptor activity // inferred from electronic annotation","chr2:202899309-202903164 (+) // 99.43 // q33.1"]
["11752598_x_at",0.08739185,0.24858856,-0.17783499,-0.11327839,0.0448246,-0.0448246,0.8148553,0.5321349,1.0647204,0.09047461,1.0647204,"up","ZDHHC20",253832.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr13:21950514-22033509 (-) // 90.3 // q12.11"]
["11716149_a_at",0.029283047,-0.07646465,0.07304573,0.047707558,-0.053795338,-0.029283524,0.90206534,0.72412664,1.014249,0.020411832,1.014249,"up","PMEPA1",56937.0,"0030521 // androgen receptor signaling pathway // non-traceable author statement","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0050699 // WW domain binding // inferred from physical interaction","chr20:56223451-56285063 (-) // 92.46 // q13.31"]
["11718966_at",0.055158615,0.025072098,0.16054535,-0.025072098,-0.094799995,-0.14559841,0.31725985,0.03519935,1.1240833,0.16874893,1.1240833,"up","NUFIP2",57532.0,"","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0042788 // polysomal ribosome // inferred from direct assay","0003723 // RNA binding // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr17:27582857-27621166 (-) // 94.03 // q11.2"]
["11763434_a_at",0.017072678,0.10272694,0.15816116,-0.28965425,-0.017072678,-0.2033081,0.34296873,0.043722525,1.199693,0.2626652,1.199693,"up","CAPN10",11132.0,"0006508 // proteolysis // inferred from mutant phenotype /// 0006508 // proteolysis // inferred from electronic annotation /// 0031532 // actin cytoskeleton reorganization // inferred from sequence or structural similarity /// 0031532 // actin cytoskeleton reorganization // inferred from electronic annotation /// 0032024 // positive regulation of insulin secretion // inferred from mutant phenotype /// 0032388 // positive regulation of intracellular transport // inferred from sequence or structural similarity /// 0032388 // positive regulation of intracellular transport // inferred from electronic annotation /// 0032869 // cellular response to insulin stimulus // inferred from mutant phenotype /// 0032869 // cellular response to insulin stimulus // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0046326 // positive regulation of glucose import // inferred from mutant phenotype /// 0046326 // positive regulation of glucose import // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005623 // cell // inferred from direct assay /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from sequence or structural similarity","0000149 // SNARE binding // inferred from sequence or structural similarity /// 0004198 // calcium-dependent cysteine-type endopeptidase activity // inferred from mutant phenotype /// 0004198 // calcium-dependent cysteine-type endopeptidase activity // inferred from electronic annotation /// 0008092 // cytoskeletal protein binding // inferred from sequence or structural similarity /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr2:241530386-241538520 (+) // 99.61 // q37.3"]
["11718498_s_at",-0.021051407,-0.05380726,0.0014657974,0.027518272,0.0600729,-0.0014657974,0.4420517,0.09056537,-1.0375441,-0.0531727,1.0375441,"down","F8A1 /// F8A2 /// F8A3","474383 /// 474384 /// 8263","","0005634 // nucleus // inferred from direct assay","","chrX:154114508-154116336 (+) // 91.26 // q28 /// chrX:154611625-154613450 (+) // 91.1 // q28 /// chrX:154686574-154688399 (-) // 91.1 // q28"]
["11758783_at",0.091842175,0.19523573,-0.16347504,-0.13028622,0.21496439,-0.091842175,0.9290101,0.78938115,1.0306746,0.04358889,1.0306746,"up","COX6C",1345.0,"0006091 // generation of precursor metabolites and energy // traceable author statement /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004129 // cytochrome-c oxidase activity // inferred from electronic annotation","chr8:100890093-100906290 (-) // 78.81 // q22.2"]
["11728725_x_at",0.002216339,-0.019877434,-0.002216339,-0.019337654,0.011745453,0.029737473,0.75725746,0.42655516,-1.0097566,-0.0140075255,1.0097566,"down","TAF6",6878.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006352 // transcription initiation, DNA-dependent // inferred from direct assay /// 0006352 // transcription initiation, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // non-traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // inferred from direct assay /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006368 // transcription elongation from RNA polymerase II promoter // traceable author statement /// 0006413 // translational initiation // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0045786 // negative regulation of cell cycle // inferred from direct assay /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005669 // transcription factor TFIID complex // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0033276 // transcription factor TFTC complex // inferred from direct assay /// 0071339 // MLL1 complex // inferred from direct assay","0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr7:99704699-99716988 (-) // 97.93 // q22.1"]
["11716853_x_at",0.04879999,0.09047079,-0.14901781,-0.0125255585,-0.08316898,0.0125255585,0.9236313,0.7728248,1.0171088,0.02447401,1.0171088,"up","IMPAD1",54928.0,"0001501 // skeletal system development // inferred from electronic annotation /// 0001958 // endochondral ossification // inferred from electronic annotation /// 0002063 // chondrocyte development // inferred from electronic annotation /// 0006021 // inositol biosynthetic process // inferred from electronic annotation /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0030204 // chondroitin sulfate metabolic process // inferred from electronic annotation /// 0042733 // embryonic digit morphogenesis // inferred from electronic annotation /// 0046854 // phosphatidylinositol phosphorylation // inferred from electronic annotation","0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008254 // 3'-nucleotidase activity // inferred from electronic annotation /// 0008441 // 3'(2'),5'-bisphosphate nucleotidase activity // inferred from electronic annotation /// 0008934 // inositol monophosphate 1-phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0052832 // inositol monophosphate 3-phosphatase activity // inferred from electronic annotation /// 0052833 // inositol monophosphate 4-phosphatase activity // inferred from electronic annotation /// 0052834 // inositol monophosphate phosphatase activity // inferred from electronic annotation","chr8:57870491-57906446 (-) // 91.71 // q12.1"]
["11740794_at",-0.02371931,0.09371328,0.15909433,0.019322872,-0.09933519,-0.019322872,0.545654,0.1617492,1.0788352,0.10947456,1.0788352,"up","C1orf220",400798.0,"","","","chr1:178511930-178518024 (+) // 51.07 // q25.2"]
["11748639_a_at",0.029708862,-0.038728714,-0.029708385,-0.07934952,0.06913948,0.05807352,0.85221934,0.61081326,-1.0202084,-0.028863825,1.0202084,"down","LOC389458 /// RBAK /// RBAK-LOC389458","100533952 /// 389458 /// 57786","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:5085451-5106758 (+) // 88.04 // p22.1"]
["11730705_s_at",0.034552097,-0.034552097,-0.13366032,0.09652662,0.1190691,-0.06821966,0.66169435,0.28847566,-1.0670878,-0.09367885,1.0670878,"down","OR51E2",81285.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // non-traceable author statement /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // non-traceable author statement /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // non-traceable author statement /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr11:4701400-4719076 (-) // 74.32 // p15.4"]
["11756718_a_at",-0.085951805,-0.00485754,-0.11413431,0.058971405,0.004858017,0.12843657,0.36735478,0.052439336,-1.0961181,-0.13240324,1.0961181,"down","PRR5",55615.0,"0007049 // cell cycle // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0030036 // actin cytoskeleton organization // inferred from direct assay /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0032321 // positive regulation of Rho GTPase activity // inferred from direct assay /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from direct assay /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005096 // GTPase activator activity // inferred from direct assay /// 0005100 // Rho GTPase activator activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction","chr22:45072948-45133545 (+) // 98.55 // q13.31"]
["11734684_s_at",0.022932053,0.07053852,0.08245468,-0.06775856,-0.022932053,-0.034864426,0.20615323,0.01125819,1.0721401,0.10049344,1.0721401,"up","UMPS",7372.0,"0006206 // pyrimidine base metabolic process // traceable author statement /// 0006207 // 'de novo' pyrimidine base biosynthetic process // inferred from electronic annotation /// 0006221 // pyrimidine nucleotide biosynthetic process // inferred from electronic annotation /// 0006222 // UMP biosynthetic process // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation /// 0009116 // nucleoside metabolic process // inferred from electronic annotation /// 0044205 // 'de novo' UMP biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046134 // pyrimidine nucleoside biosynthetic process // traceable author statement /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement","0003824 // catalytic activity // inferred from electronic annotation /// 0004588 // orotate phosphoribosyltransferase activity // inferred from direct assay /// 0004588 // orotate phosphoribosyltransferase activity // traceable author statement /// 0004588 // orotate phosphoribosyltransferase activity // inferred from electronic annotation /// 0004590 // orotidine-5'-phosphate decarboxylase activity // inferred from direct assay /// 0004590 // orotidine-5'-phosphate decarboxylase activity // traceable author statement /// 0004590 // orotidine-5'-phosphate decarboxylase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0016831 // carboxy-lyase activity // inferred from electronic annotation","chr3:124449212-124464040 (+) // 73.19 // q21.2"]
["11730735_s_at",-0.04553795,-0.049106598,0.03205967,-0.00575161,0.00575161,0.039315224,0.68370664,0.31701455,-1.0238233,-0.03396669,1.0238233,"down","PPP1R8",5511.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006401 // RNA catabolic process // traceable author statement /// 0008283 // cell proliferation // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004519 // endonuclease activity // inferred from electronic annotation /// 0004864 // protein phosphatase inhibitor activity // inferred from electronic annotation /// 0004865 // protein serine/threonine phosphatase inhibitor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008599 // protein phosphatase type 1 regulator activity // inferred from electronic annotation /// 0008995 // ribonuclease E activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation","chr1:28157251-28178191 (+) // 99.79 // p35.3"]
["11741197_s_at",-0.06778407,0.059509754,0.0,0.0,0.12542701,-0.094739914,0.9570665,0.86852014,-1.0090426,-0.012987114,1.0090426,"down","KIF5C",3800.0,"0006996 // organelle organization // traceable author statement /// 0007018 // microtubule-based movement // inferred from electronic annotation /// 0008045 // motor axon guidance // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005871 // kinesin complex // traceable author statement /// 0005874 // microtubule // inferred from electronic annotation /// 0035253 // ciliary rootlet // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003777 // microtubule motor activity // inferred from electronic annotation /// 0003777 // microtubule motor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0034190 // apolipoprotein receptor binding // inferred from electronic annotation","chr2:149632791-149883273 (+) // 98.14 // q23.1"]
["11728710_a_at",-0.041876316,0.0039930344,0.05420637,-0.066660404,-0.003993511,0.024419308,0.85542005,0.61814684,1.0145589,0.020852638,1.0145589,"up","NFATC2IP",84901.0,"0001816 // cytokine production // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","","chr16:28962257-28977873 (+) // 55.54 // p11.2"]
["11738028_a_at",0.011879444,0.07854414,-0.09352064,-0.011878967,0.05698538,-0.028938293,0.97321373,0.9150693,-1.0044612,-0.006421793,1.0044612,"down","LAMA1",284217.0,"0002011 // morphogenesis of an epithelial sheet // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from sequence or structural similarity /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0009888 // tissue development // inferred from electronic annotation /// 0030155 // regulation of cell adhesion // inferred from electronic annotation /// 0030334 // regulation of cell migration // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from electronic annotation /// 0045198 // establishment of epithelial cell apical/basal polarity // inferred from electronic annotation /// 0045995 // regulation of embryonic development // inferred from electronic annotation /// 0060041 // retina development in camera-type eye // inferred from electronic annotation /// 0060441 // epithelial tube branching involved in lung morphogenesis // inferred from electronic annotation /// 0060445 // branching involved in salivary gland morphogenesis // inferred from electronic annotation /// 0061304 // retinal blood vessel morphogenesis // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from sequence or structural similarity /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005604 // basement membrane // inferred from direct assay /// 0005604 // basement membrane // inferred from electronic annotation /// 0005606 // laminin-1 complex // inferred from direct assay /// 0005606 // laminin-1 complex // inferred from physical interaction /// 0005606 // laminin-1 complex // inferred from electronic annotation /// 0005608 // laminin-3 complex // inferred from physical interaction /// 0005615 // extracellular space // inferred from direct assay /// 0005911 // cell-cell junction // inferred from electronic annotation /// 0031012 // extracellular matrix // traceable author statement /// 0031012 // extracellular matrix // inferred from electronic annotation /// 0043256 // laminin complex // inferred from electronic annotation","0005102 // receptor binding // inferred from electronic annotation /// 0005201 // extracellular matrix structural constituent // inferred from sequence or structural similarity /// 0005201 // extracellular matrix structural constituent // inferred from electronic annotation /// 0043208 // glycosphingolipid binding // inferred from electronic annotation","chr18:6941887-7117813 (-) // 99.8 // p11.31"]
["11750246_a_at",0.076554775,0.06994438,0.13618088,-0.06994438,-0.09753561,-0.24700642,0.2426667,0.01687932,1.1747786,0.23238887,1.1747786,"up","GPER",2852.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0030518 // intracellular steroid hormone receptor signaling pathway // inferred from electronic annotation /// 0043401 // steroid hormone mediated signaling pathway // inferred from electronic annotation /// 0045742 // positive regulation of epidermal growth factor receptor signaling pathway // inferred from electronic annotation /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003707 // steroid hormone receptor activity // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement /// 0005496 // steroid binding // inferred from electronic annotation /// 0042562 // hormone binding // inferred from electronic annotation","chr7:1132500-1133446 (+) // 100.0 // p22.3"]
["11718206_x_at",0.025239944,0.010793686,0.079232216,-0.028144836,-0.010793686,-0.021922112,0.36572728,0.051972393,1.0415332,0.05870887,1.0415332,"up","TOE1",114034.0,"","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:45805319-45809763 (+) // 92.93 // p34.1"]
["11754615_x_at",-0.008990288,-0.045134544,-0.006772995,0.04078865,0.11858654,0.006772995,0.45676315,0.098992266,-1.0538591,-0.075682014,1.0538591,"down","UFM1",51569.0,"0071569 // protein ufmylation // inferred from direct assay /// 0071569 // protein ufmylation // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","","chr13:38935219-38937140 (+) // 90.93 // q13.3"]
["11727527_x_at",0.02887106,0.056200266,-0.0012366772,-0.031344652,-0.079913855,0.0012366772,0.43891245,0.08846671,1.0458086,0.064618774,1.0458086,"up","TNNT2",7139.0,"0006200 // ATP catabolic process // inferred from direct assay /// 0008016 // regulation of heart contraction // inferred from mutant phenotype /// 0030049 // muscle filament sliding // inferred from direct assay /// 0030049 // muscle filament sliding // traceable author statement /// 0032780 // negative regulation of ATPase activity // inferred from direct assay /// 0032781 // positive regulation of ATPase activity // inferred from direct assay /// 0051592 // response to calcium ion // inferred from direct assay /// 0051592 // response to calcium ion // inferred from mutant phenotype /// 0055010 // ventricular cardiac muscle tissue morphogenesis // inferred from mutant phenotype","0005829 // cytosol // traceable author statement /// 0005861 // troponin complex // inferred from direct assay /// 0005865 // striated muscle thin filament // inferred from direct assay /// 0030017 // sarcomere // traceable author statement","0003779 // actin binding // inferred from direct assay /// 0005523 // tropomyosin binding // inferred from direct assay /// 0016887 // ATPase activity // inferred from direct assay /// 0030172 // troponin C binding // inferred from physical interaction /// 0031013 // troponin I binding // inferred from physical interaction","chr1:201328136-201346890 (-) // 88.23 // q32.1"]
["11763058_at",0.048488617,0.16142201,-0.05050397,0.072330475,-0.048488617,-0.22895789,0.6850876,0.31886217,1.0878711,0.12150759,1.0878711,"up","TAC3",6866.0,"0007217 // tachykinin receptor signaling pathway // inferred from electronic annotation /// 0007217 // tachykinin receptor signaling pathway // traceable author statement /// 0007218 // neuropeptide signaling pathway // inferred from electronic annotation /// 0007565 // female pregnancy // traceable author statement /// 0043278 // response to morphine // inferred from electronic annotation /// 0045777 // positive regulation of blood pressure // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0005625 // soluble fraction // traceable author statement","0005102 // receptor binding // traceable author statement","chr12:57407140-57410297 (-) // 66.31 // q13.3"]
["11732528_s_at",-0.18126607,0.033635378,-0.077952385,0.07543039,-0.033635378,0.03940916,0.60425264,0.21706365,-1.0734556,-0.10226248,1.0734556,"down","TBX5",6910.0,"0002009 // morphogenesis of an epithelium // inferred from electronic annotation /// 0003166 // bundle of His development // inferred from electronic annotation /// 0003181 // atrioventricular valve morphogenesis // inferred from electronic annotation /// 0003197 // endocardial cushion development // inferred from electronic annotation /// 0003218 // cardiac left ventricle formation // inferred from sequence or structural similarity /// 0003218 // cardiac left ventricle formation // inferred from electronic annotation /// 0003229 // ventricular cardiac muscle tissue development // inferred from electronic annotation /// 0003281 // ventricular septum development // inferred from sequence or structural similarity /// 0003281 // ventricular septum development // inferred from electronic annotation /// 0003283 // atrial septum development // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006917 // induction of apoptosis // inferred from direct assay /// 0007267 // cell-cell signaling // inferred from direct assay /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007389 // pattern specification process // inferred from electronic annotation /// 0007507 // heart development // inferred from direct assay /// 0007507 // heart development // inferred from mutant phenotype /// 0007507 // heart development // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0010467 // gene expression // traceable author statement /// 0010719 // negative regulation of epithelial to mesenchymal transition // traceable author statement /// 0030324 // lung development // inferred from electronic annotation /// 0030326 // embryonic limb morphogenesis // inferred from mutant phenotype /// 0030326 // embryonic limb morphogenesis // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // inferred from direct assay /// 0035115 // embryonic forelimb morphogenesis // inferred from electronic annotation /// 0035117 // embryonic arm morphogenesis // inferred from mutant phenotype /// 0035136 // forelimb morphogenesis // inferred from mutant phenotype /// 0035136 // forelimb morphogenesis // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0051891 // positive regulation of cardioblast differentiation // inferred from direct assay /// 0055007 // cardiac muscle cell differentiation // inferred from electronic annotation /// 0060039 // pericardium development // inferred from direct assay /// 0060044 // negative regulation of cardiac muscle cell proliferation // inferred from direct assay /// 0060045 // positive regulation of cardiac muscle cell proliferation // inferred from electronic annotation /// 0060980 // cell migration involved in coronary vasculogenesis // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement","0000977 // RNA polymerase II regulatory region sequence-specific DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from mutant phenotype /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from direct assay","chr12:114791731-114843968 (-) // 93.28 // q24.21"]
["11739910_a_at",0.36175728,0.2907958,0.36175728,-0.5721917,-0.29079628,-0.44847345,0.08459432,7.9428684E-4,1.7114952,0.77525723,1.7114952,"up","ELOVL6",79071.0,"0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0019367 // fatty acid elongation, saturated fatty acid // inferred from direct assay /// 0019367 // fatty acid elongation, saturated fatty acid // inferred from electronic annotation /// 0019432 // triglyceride biosynthetic process // traceable author statement /// 0030497 // fatty acid elongation // inferred from electronic annotation /// 0034625 // fatty acid elongation, monounsaturated fatty acid // inferred from electronic annotation /// 0035338 // long-chain fatty-acyl-CoA biosynthetic process // traceable author statement /// 0042759 // long-chain fatty acid biosynthetic process // inferred from direct assay /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030176 // integral to endoplasmic reticulum membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0009922 // fatty acid elongase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016747 // transferase activity, transferring acyl groups other than amino-acyl groups // inferred from electronic annotation","chr4:110970228-111120139 (-) // 99.32 // q25"]
["11728816_at",-0.05040121,0.03672695,-0.07265091,0.13278341,-0.036726475,0.08640289,0.6006228,0.21334149,-1.0640714,-0.08959498,1.0640714,"down","AARS2",57505.0,"0006412 // translation // inferred from electronic annotation /// 0006418 // tRNA aminoacylation for protein translation // traceable author statement /// 0006419 // alanyl-tRNA aminoacylation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0033108 // mitochondrial respiratory chain complex assembly // inferred from mutant phenotype /// 0043039 // tRNA aminoacylation // inferred from electronic annotation /// 0070143 // mitochondrial alanyl-tRNA aminoacylation // inferred from mutant phenotype","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from mutant phenotype /// 0005739 // mitochondrion // inferred from electronic annotation","0000049 // tRNA binding // inferred from electronic annotation /// 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0004812 // aminoacyl-tRNA ligase activity // inferred from electronic annotation /// 0004813 // alanine-tRNA ligase activity // inferred from mutant phenotype /// 0004813 // alanine-tRNA ligase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016876 // ligase activity, forming aminoacyl-tRNA and related compounds // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:44265608-44281063 (-) // 79.85 // p21.1"]
["11760628_at",0.23116302,0.08372164,-0.08372164,-0.14697886,-0.27260065,0.44109726,0.92742205,0.7836845,1.0496306,0.069881745,1.0496306,"up","TTLL5",23093.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006464 // cellular protein modification process // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0005932 // microtubule basal body // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0004835 // tubulin-tyrosine ligase activity // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation","chr14:76127620-76178845 (+) // 94.43 // q24.3"]
["11726979_x_at",0.003911972,-0.003911972,0.05581951,-0.027381897,-0.025534153,0.05616665,0.8597586,0.62675095,1.01222,0.01752292,1.01222,"up","SUGP2",10147.0,"0006396 // RNA processing // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation","chr19:19103001-19144380 (-) // 88.95 // p13.11"]
["11717107_a_at",-0.036785126,-0.0061807632,-0.012181282,0.016937256,0.051015854,0.0061807632,0.38198185,0.058725987,-1.0303209,-0.04309372,1.0303209,"down","PDLIM5",10611.0,"0051963 // regulation of synapse assembly // inferred from sequence or structural similarity /// 0051963 // regulation of synapse assembly // inferred from electronic annotation /// 0061001 // regulation of dendritic spine morphogenesis // inferred from sequence or structural similarity /// 0061001 // regulation of dendritic spine morphogenesis // inferred from electronic annotation","0005624 // membrane fraction // inferred from sequence or structural similarity /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from sequence or structural similarity /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0030018 // Z disc // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0003779 // actin binding // inferred from sequence or structural similarity /// 0003779 // actin binding // inferred from electronic annotation /// 0005080 // protein kinase C binding // inferred from sequence or structural similarity /// 0005080 // protein kinase C binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0042805 // actinin binding // inferred from sequence or structural similarity /// 0042805 // actinin binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from electronic annotation","chr4:95373041-95589377 (+) // 81.23 // q22.3"]
["11727423_a_at",0.037343025,0.01884842,0.07452488,-0.01884842,-0.08710098,-0.050848007,0.25799572,0.020125056,1.0686859,0.095837876,1.0686859,"up","CANX",821.0,"0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0006457 // protein folding // traceable author statement /// 0006457 // protein folding // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0009306 // protein secretion // traceable author statement /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0048488 // synaptic vesicle endocytosis // inferred from sequence or structural similarity /// 0072583 // clathrin-mediated endocytosis // inferred from sequence or structural similarity","0005622 // intracellular // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // non-traceable author statement /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005791 // rough endoplasmic reticulum // inferred from electronic annotation /// 0005840 // ribosome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0032839 // dendrite cytoplasm // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from electronic annotation /// 0071556 // integral to lumenal side of endoplasmic reticulum membrane // traceable author statement","0005509 // calcium ion binding // inferred from electronic annotation /// 0005509 // calcium ion binding // traceable author statement /// 0005509 // calcium ion binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0030246 // carbohydrate binding // inferred from electronic annotation /// 0034185 // apolipoprotein binding // inferred from electronic annotation /// 0035255 // ionotropic glutamate receptor binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // non-traceable author statement /// 0051082 // unfolded protein binding // inferred from electronic annotation","chr5:179125927-179158637 (+) // 91.82 // q35.3"]
["11747592_x_at",0.003602028,0.07237339,0.07837963,-0.09375095,-0.15382576,-0.003602028,0.36859325,0.053326093,1.0982282,0.13517788,1.0982282,"up","ERI3",79033.0,"0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004527 // exonuclease activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:44686765-44818707 (-) // 95.7 // p34.1"]
["11752646_a_at",-0.0037572384,0.12616396,0.043998003,-0.063795805,-0.06261492,0.0037572384,0.4476486,0.09381912,1.0690674,0.096352756,1.0690674,"up","KCNJ5",3762.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006813 // potassium ion transport // traceable author statement /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0008076 // voltage-gated potassium channel complex // traceable author statement /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030315 // T-tubule // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005242 // inward rectifier potassium channel activity // inferred from direct assay /// 0005242 // inward rectifier potassium channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0015467 // G-protein activated inward rectifier potassium channel activity // traceable author statement /// 0015467 // G-protein activated inward rectifier potassium channel activity // inferred from electronic annotation","chr11:128761363-128786748 (+) // 99.25 // q24.3"]
["11729281_s_at",-0.0069999695,0.089123726,-0.13271713,-0.05830574,0.14895916,0.0069994926,0.851199,0.6071733,-1.0348455,-0.049415354,1.0348455,"down","PTP4A3",11156.0,"0006470 // protein dephosphorylation // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation","0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0004727 // prenylated protein tyrosine phosphatase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation","chr8:142428008-142441620 (+) // 93.07 // q24.3"]
["11757713_x_at",0.024301529,-0.0022420883,0.06217861,0.0022420883,-0.02273655,-0.0604105,0.4624645,0.10255492,1.0388935,0.055047713,1.0388935,"up","ATXN2L",11273.0,"","0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation","","chr16:28847271-28848558 (+) // 83.31 // p11.2"]
["11744390_s_at",-0.0254879,-0.019145966,0.007255554,0.047551155,-0.007255554,0.021204948,0.5355714,0.15333258,-1.0231088,-0.03295963,1.0231088,"down","TIMM8B",26521.0,"0006626 // protein targeting to mitochondrion // traceable author statement /// 0006626 // protein targeting to mitochondrion // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0007605 // sensory perception of sound // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045039 // protein import into mitochondrial inner membrane // inferred from electronic annotation /// 0072321 // chaperone-mediated protein transport // traceable author statement","0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0042719 // mitochondrial intermembrane space protein transporter complex // traceable author statement /// 0042719 // mitochondrial intermembrane space protein transporter complex // inferred from electronic annotation","0008270 // zinc ion binding // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:111954814-111957522 (-) // 85.78 // q23.1"]
["11738207_a_at",0.007557869,-0.007557869,-0.09150934,0.042031765,-0.23182869,0.018991947,0.92935425,0.7902547,1.0184901,0.026431922,1.0184901,"up","C6orf70",55780.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr6:170151720-170181617 (+) // 98.22 // q27"]
["11722630_a_at",-0.1315031,-0.13270092,0.10451698,0.04665661,0.15250969,-0.04665661,0.70514345,0.34651172,-1.074798,-0.10406552,1.074798,"down","NARG2",79664.0,"","0005634 // nucleus // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation","chr15:60711807-60771344 (-) // 84.62 // q22.2"]
["11752942_s_at",-0.042737007,0.042737007,0.13163471,-0.16237116,-0.08990431,0.07850218,0.6768984,0.30844864,1.0731134,0.101802595,1.0731134,"up","DBP",1628.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0048511 // rhythmic process // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0000977 // RNA polymerase II regulatory region sequence-specific DNA binding // inferred from direct assay /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation","chr19:49133819-49140369 (-) // 88.81 // q13.33"]
["11721249_a_at",0.015363693,-0.04873967,0.006401539,-0.12704611,0.080628395,-0.006401539,0.9667583,0.898573,1.0059893,0.008614979,1.0059893,"up","GNG2",54331.0,"0006112 // energy reserve metabolic process // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007191 // adenylate cyclase-activating dopamine receptor signaling pathway // inferred from sequence or structural similarity /// 0007268 // synaptic transmission // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008283 // cell proliferation // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0071377 // cellular response to glucagon stimulus // traceable author statement /// 0071380 // cellular response to prostaglandin E stimulus // inferred from sequence or structural similarity /// 0071870 // cellular response to catecholamine stimulus // inferred from sequence or structural similarity","0005624 // membrane fraction // inferred from sequence or structural similarity /// 0005834 // heterotrimeric G-protein complex // inferred from sequence or structural similarity /// 0005834 // heterotrimeric G-protein complex // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation","chr14:52326839-52436513 (+) // 96.5 // q22.1"]
["11727683_a_at",-0.031568766,0.13520622,-0.124854565,0.49410582,0.031568766,-0.13856125,0.81915617,0.54069924,-1.0989381,-0.13611013,1.0989381,"down","AP3B2",8120.0,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006892 // post-Golgi vesicle-mediated transport // traceable author statement /// 0006897 // endocytosis // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030117 // membrane coat // inferred from electronic annotation /// 0030137 // COPI-coated vesicle // traceable author statement /// 0030665 // clathrin coated vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0044431 // Golgi apparatus part // inferred from electronic annotation","0005215 // transporter activity // traceable author statement /// 0008565 // protein transporter activity // inferred from electronic annotation","chr15:83328032-83378660 (-) // 97.85 // q25.2"]
["11736501_x_at",-0.0057229996,0.0043172836,-0.0035581589,-0.08175087,0.01706314,0.0035581589,0.8372103,0.57945013,1.0130616,0.018721962,1.0130616,"up","SS18",6760.0,"0000226 // microtubule cytoskeleton organization // inferred from electronic annotation /// 0000902 // cell morphogenesis // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007010 // cytoskeleton organization // inferred from electronic annotation /// 0007243 // intracellular protein kinase cascade // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0048013 // ephrin receptor signaling pathway // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005881 // cytoplasmic microtubule // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0030374 // ligand-dependent nuclear receptor transcription coactivator activity // inferred from direct assay","chr18:23596218-23670865 (-) // 90.84 // q11.2"]
["11756329_a_at",0.011249542,-0.0773263,-0.0693593,0.109025,-0.011249065,0.09952593,0.42824206,0.08137423,-1.0799111,-0.11091257,1.0799111,"down","EEFSEC",60678.0,"0001514 // selenocysteine incorporation // inferred from electronic annotation /// 0006184 // GTP catabolic process // non-traceable author statement /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006412 // translation // inferred from electronic annotation /// 0006414 // translational elongation // non-traceable author statement","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation","0000049 // tRNA binding // inferred from electronic annotation /// 0000166 // nucleotide binding // inferred from electronic annotation /// 0003746 // translation elongation factor activity // non-traceable author statement /// 0003924 // GTPase activity // non-traceable author statement /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation","chr3:127872343-128127429 (+) // 99.94 // q21.3"]
["11719163_a_at",-0.03290558,0.011688709,-0.011688709,0.06014967,0.14620829,-0.017587662,0.592479,0.20623714,-1.0525523,-0.073891975,1.0525523,"down","CLCN5",1184.0,"0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006821 // chloride transport // traceable author statement /// 0006821 // chloride transport // inferred from electronic annotation /// 0006897 // endocytosis // inferred from electronic annotation /// 0007588 // excretion // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from direct assay /// 0045177 // apical part of cell // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005247 // voltage-gated chloride channel activity // inferred from electronic annotation /// 0005254 // chloride channel activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0015297 // antiporter activity // inferred from electronic annotation","chrX:49687224-49863887 (+) // 92.28 // p11.23"]
["11740174_a_at",-0.0056946278,-0.021726847,0.09681821,0.0056946278,-0.08155632,0.16527557,0.98170614,0.938494,-1.0046357,-0.0066724354,1.0046357,"down","NRG3",10718.0,"0001558 // regulation of cell growth // non-traceable author statement /// 0007171 // activation of transmembrane receptor protein tyrosine kinase activity // non-traceable author statement /// 0007243 // intracellular protein kinase cascade // inferred from electronic annotation /// 0007389 // pattern specification process // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0030879 // mammary gland development // inferred from electronic annotation /// 0060596 // mammary placode formation // inferred from electronic annotation","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005102 // receptor binding // inferred from electronic annotation /// 0008083 // growth factor activity // non-traceable author statement /// 0008083 // growth factor activity // inferred from electronic annotation /// 0030297 // transmembrane receptor protein tyrosine kinase activator activity // non-traceable author statement /// 0030971 // receptor tyrosine kinase binding // non-traceable author statement","chr10:83635069-84747438 (+) // 95.34 // q23.1"]
["11733839_s_at",0.13272142,0.035502434,-0.058048725,-0.17607307,0.0,0.0,0.6722465,0.30142704,1.0683734,0.09541602,1.0683734,"up","ABHD2",11057.0,"0009611 // response to wounding // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0004091 // carboxylesterase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr15:89631380-89745591 (+) // 88.98 // q26.1"]
["11736092_at",-0.01244998,0.071986675,-0.047094584,0.012449741,-0.1518929,0.109796524,0.95933414,0.8756849,1.0097721,0.014029668,1.0097721,"up","GCA",25801.0,"0006944 // cellular membrane fusion // traceable author statement","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0005509 // calcium ion binding // inferred from direct assay /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005509 // calcium ion binding // traceable author statement /// 0042803 // protein homodimerization activity // inferred from physical interaction","chr2:163200589-163219631 (+) // 94.04 // q24.2"]
["11757018_a_at",0.038386345,0.031249046,0.23096943,-0.16523743,-0.031249046,-0.055470467,0.4177544,0.07581687,1.1361767,0.18418723,1.1361767,"up","COL12A1",1303.0,"0001501 // skeletal system development // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0030199 // collagen fibril organization // non-traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005581 // collagen // inferred from electronic annotation /// 0005595 // collagen type XII // non-traceable author statement /// 0005595 // collagen type XII // inferred from electronic annotation /// 0005595 // collagen type XII // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0031012 // extracellular matrix // inferred from direct assay","0030020 // extracellular matrix structural constituent conferring tensile strength // non-traceable author statement","chr6:75794042-75794572 (-) // 79.34 // q13"]
["11716170_at",0.1853056,0.14975166,-0.05471611,-0.20250177,-0.04472351,0.04472351,0.58267945,0.19664472,1.1180212,0.1609476,1.1180212,"up","LMNB2",84823.0,"","0005634 // nucleus // inferred from electronic annotation /// 0005637 // nuclear inner membrane // inferred from electronic annotation /// 0005638 // lamin filament // inferred from electronic annotation /// 0005652 // nuclear lamina // non-traceable author statement /// 0005882 // intermediate filament // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005198 // structural molecule activity // inferred from electronic annotation","chr19:2428163-2456994 (-) // 98.03 // p13.3"]
["11717244_at",0.0048007965,-0.051812172,0.031015396,-0.012532234,-0.0048007965,0.013604164,0.96136755,0.8810249,-1.0028384,-0.0040891063,1.0028384,"down","LSM4",25804.0,"0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0043928 // exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005688 // U6 snRNP // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0030532 // small nuclear ribonucleoprotein complex // traceable author statement","0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr19:18417716-18434084 (-) // 95.29 // p13.11"]
["11745979_a_at",-0.0141272545,0.01321888,0.023235798,-0.065039635,-0.013219357,0.025469303,0.75866324,0.4292131,1.0175072,0.025038997,1.0175072,"up","LIG1",3978.0,"0000084 // S phase of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0000722 // telomere maintenance via recombination // traceable author statement /// 0000723 // telomere maintenance // traceable author statement /// 0000724 // double-strand break repair via homologous recombination // traceable author statement /// 0006259 // DNA metabolic process // traceable author statement /// 0006260 // DNA replication // inferred from electronic annotation /// 0006266 // DNA ligation // inferred from direct assay /// 0006266 // DNA ligation // inferred from electronic annotation /// 0006271 // DNA strand elongation involved in DNA replication // traceable author statement /// 0006273 // lagging strand elongation // not recorded /// 0006281 // DNA repair // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006283 // transcription-coupled nucleotide-excision repair // traceable author statement /// 0006284 // base-excision repair // traceable author statement /// 0006289 // nucleotide-excision repair // not recorded /// 0006289 // nucleotide-excision repair // traceable author statement /// 0006297 // nucleotide-excision repair, DNA gap filling // traceable author statement /// 0006302 // double-strand break repair // traceable author statement /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0032201 // telomere maintenance via semi-conservative replication // traceable author statement /// 0033151 // V(D)J recombination // inferred from direct assay /// 0051103 // DNA ligation involved in DNA repair // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0005634 // nucleus // not recorded /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // not recorded /// 0005739 // mitochondrion // not recorded","0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0003909 // DNA ligase activity // inferred from direct assay /// 0003909 // DNA ligase activity // inferred from electronic annotation /// 0003910 // DNA ligase (ATP) activity // not recorded /// 0003910 // DNA ligase (ATP) activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:48618705-48673587 (-) // 89.62 // q13.33"]
["11753371_a_at",0.01811409,-0.01811409,-0.27399492,0.02750063,-0.05176592,0.20550394,0.64865655,0.27237573,-1.110912,-0.15174448,1.110912,"down","CYP4F2 /// CYP4F3","4051 /// 8529","0000038 // very long-chain fatty acid metabolic process // inferred from direct assay /// 0001676 // long-chain fatty acid metabolic process // inferred from direct assay /// 0003091 // renal water homeostasis // inferred from expression pattern /// 0003095 // pressure natriuresis // inferred from expression pattern /// 0006690 // icosanoid metabolic process // traceable author statement /// 0006691 // leukotriene metabolic process // traceable author statement /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0008217 // regulation of blood pressure // inferred from mutant phenotype /// 0017144 // drug metabolic process // inferred from mutant phenotype /// 0019369 // arachidonic acid metabolic process // inferred from direct assay /// 0019373 // epoxygenase P450 pathway // inferred from direct assay /// 0030195 // negative regulation of blood coagulation // inferred from mutant phenotype /// 0032304 // negative regulation of icosanoid secretion // inferred from mutant phenotype /// 0032305 // positive regulation of icosanoid secretion // inferred from mutant phenotype /// 0036101 // leukotriene B4 catabolic process // inferred from direct assay /// 0036101 // leukotriene B4 catabolic process // inferred from electronic annotation /// 0042360 // vitamin E metabolic process // inferred from direct assay /// 0042371 // vitamin K biosynthetic process // inferred from mutant phenotype /// 0044281 // small molecule metabolic process // traceable author statement /// 0055078 // sodium ion homeostasis // inferred from expression pattern /// 0055114 // oxidation-reduction process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005792 // microsome // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from direct assay","0004497 // monooxygenase activity // traceable author statement /// 0004497 // monooxygenase activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008392 // arachidonic acid epoxygenase activity // inferred from direct assay /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016705 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen // inferred from electronic annotation /// 0018685 // alkane 1-monooxygenase activity // inferred from direct assay /// 0020037 // heme binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047057 // vitamin-K-epoxide reductase (warfarin-sensitive) activity // inferred from mutant phenotype /// 0050051 // leukotriene-B4 20-monooxygenase activity // inferred from electronic annotation /// 0050051 // leukotriene-B4 20-monooxygenase activity // inferred from direct assay /// 0052869 // arachidonic acid omega-hydroxylase activity // inferred from direct assay /// 0052870 // tocopherol omega-hydroxylase activity // inferred from electronic annotation /// 0052871 // alpha-tocopherol omega-hydroxylase activity // inferred from electronic annotation /// 0052871 // alpha-tocopherol omega-hydroxylase activity // inferred from direct assay /// 0052872 // tocotrienol omega-hydroxylase activity // inferred from direct assay","chr19:15996732-16008881 (-) // 99.69 // p13.12"]
["11761391_at",0.0731771,0.021682024,0.03546357,-0.11921048,-0.16852283,-0.021682024,0.30989364,0.03290377,1.1069418,0.1465794,1.1069418,"up","MTTP",4547.0,"0006497 // protein lipidation // inferred from electronic annotation /// 0006629 // lipid metabolic process // traceable author statement /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006641 // triglyceride metabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // traceable author statement /// 0006869 // lipid transport // inferred from electronic annotation /// 0042157 // lipoprotein metabolic process // traceable author statement /// 0042157 // lipoprotein metabolic process // inferred from electronic annotation /// 0042632 // cholesterol homeostasis // inferred from electronic annotation /// 0042953 // lipoprotein transport // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0051592 // response to calcium ion // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0005791 // rough endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0031526 // brush border membrane // inferred from electronic annotation /// 0031528 // microvillus membrane // inferred from electronic annotation /// 0031988 // membrane-bounded vesicle // inferred from electronic annotation","0005319 // lipid transporter activity // inferred from electronic annotation /// 0005319 // lipid transporter activity // traceable author statement /// 0005488 // binding // traceable author statement /// 0008289 // lipid binding // inferred from electronic annotation /// 0034185 // apolipoprotein binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr4:100495863-100505342 (+) // 97.53 // q23"]
["11763856_a_at",0.005683899,0.020222187,0.10322523,-0.046470165,-0.005683899,-0.106266975,0.43460247,0.08531961,1.0686954,0.09585075,1.0686954,"up","HOMER3",9454.0,"0006605 // protein targeting // traceable author statement /// 0007216 // G-protein coupled glutamate receptor signaling pathway // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr19:19017821-19045206 (-) // 99.13 // p13.11"]
["11753112_x_at",0.053215504,0.14792919,-0.012746811,-0.021532059,-0.050983906,0.012747288,0.55949324,0.1742875,1.0590144,0.08272226,1.0590144,"up","MED25",81857.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0035563 // positive regulation of chromatin binding // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0048147 // negative regulation of fibroblast proliferation // inferred from mutant phenotype /// 0071158 // positive regulation of cell cycle arrest // inferred from mutant phenotype /// 2001178 // positive regulation of mediator complex assembly // inferred from mutant phenotype","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0042974 // retinoic acid receptor binding // inferred from physical interaction /// 0042974 // retinoic acid receptor binding // inferred from electronic annotation /// 0046965 // retinoid X receptor binding // inferred from physical interaction /// 0046965 // retinoid X receptor binding // inferred from electronic annotation","chr19:50321598-50340219 (+) // 98.93 // q13.33"]
["11743696_at",-0.042493343,0.02999401,-0.029993773,0.09007931,0.034044743,-0.2402916,0.9424477,0.82574,1.0171682,0.024558213,1.0171682,"up","CLEC14A",161198.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr14:38723306-38725575 (-) // 92.87 // q21.1"]
["11732217_a_at",0.020338058,0.010279655,0.0957737,-0.039782524,-0.010279655,-0.041659355,0.3970105,0.06522095,1.0516862,0.072704256,1.0516862,"up","BID",637.0,"0001836 // release of cytochrome c from mitochondria // inferred from direct assay /// 0001836 // release of cytochrome c from mitochondria // inferred from electronic annotation /// 0006626 // protein targeting to mitochondrion // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0008625 // induction of apoptosis via death domain receptors // traceable author statement /// 0008629 // induction of apoptosis by intracellular signals // traceable author statement /// 0008633 // activation of pro-apoptotic gene products // traceable author statement /// 0008637 // apoptotic mitochondrial changes // traceable author statement /// 0008637 // apoptotic mitochondrial changes // inferred from electronic annotation /// 0032355 // response to estradiol stimulus // inferred from electronic annotation /// 0032461 // positive regulation of protein oligomerization // inferred from direct assay /// 0032464 // positive regulation of protein homooligomerization // inferred from direct assay /// 0032464 // positive regulation of protein homooligomerization // inferred from electronic annotation /// 0034349 // glial cell apoptotic process // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0046902 // regulation of mitochondrial membrane permeability // inferred from electronic annotation /// 0051260 // protein homooligomerization // inferred from electronic annotation /// 0051402 // neuron apoptotic process // traceable author statement /// 0090150 // establishment of protein localization in membrane // inferred from direct assay /// 0090200 // positive regulation of release of cytochrome c from mitochondria // inferred from genetic interaction /// 0090200 // positive regulation of release of cytochrome c from mitochondria // inferred from mutant phenotype /// 0090200 // positive regulation of release of cytochrome c from mitochondria // inferred from electronic annotation /// 2000045 // regulation of G1/S transition of mitotic cell cycle // inferred from electronic annotation /// 2001238 // positive regulation of extrinsic apoptotic signaling pathway // inferred from mutant phenotype","0005624 // membrane fraction // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation /// 0032592 // integral to mitochondrial membrane // inferred from electronic annotation","0005123 // death receptor binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from electronic annotation","chr22:18216905-18257224 (-) // 93.85 // q11.21"]
["11723352_a_at",0.052640676,-0.027261972,-0.06099105,-0.05045581,0.027261972,0.050064325,0.8790971,0.67021894,-1.0145413,-0.02082755,1.0145413,"down","TMEM178A",130733.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr2:39893034-39945101 (+) // 93.25 // p22.1"]
["11762885_at",-0.03898859,0.21567082,-0.14214301,0.03898859,-0.114298105,0.1471932,0.9778538,0.9286592,-1.0086657,-0.012448077,1.0086657,"down","","","","","","chr11:35764740-35765785 (+) // 62.9 // p13"]
["11753121_s_at",0.15834045,0.15848207,0.04365349,-0.13380432,-0.04365349,-0.048464775,0.23477076,0.015379471,1.1450942,0.19546622,1.1450942,"up","CYP4Z1 /// CYP4Z2P","163720 /// 199974","0055114 // oxidation-reduction process // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004497 // monooxygenase activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from electronic annotation /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016705 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen // inferred from electronic annotation /// 0020037 // heme binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070330 // aromatase activity // inferred from electronic annotation","chr1:47533162-47564912 (+) // 95.41 // p33 /// chr1:47333662-47366106 (-) // 97.83 // p33"]
["11762080_at",0.0148124695,-0.07142639,-0.014812231,-0.32044291,0.19349384,0.06033659,0.9975896,0.9922888,-1.0011128,-0.0016045654,1.0011128,"down",-0.014812231,"","","0000160 // two-component signal transduction system (phosphorelay) // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0018106 // peptidyl-histidine phosphorylation // inferred from electronic annotation /// 0023014 // signal transduction by phosphorylation // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation","0000155 // two-component sensor activity // inferred from electronic annotation /// 0004673 // protein histidine kinase activity // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from electronic annotation"]
["11756630_a_at",-0.023700714,-0.04540634,-0.12432575,0.041152954,0.023700714,0.035203934,0.31379813,0.03431913,-1.0701627,-0.09783009,1.0701627,"down","TMED10",10972.0,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from direct assay /// 0006888 // ER to Golgi vesicle-mediated transport // traceable author statement /// 0006890 // retrograde vesicle-mediated transport, Golgi to ER // inferred from sequence or structural similarity /// 0007030 // Golgi organization // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0034205 // beta-amyloid formation // inferred from mutant phenotype /// 0035459 // cargo loading into vesicle // traceable author statement /// 0035964 // COPI-coated vesicle budding // inferred from direct assay /// 0045055 // regulated secretory pathway // inferred from sequence or structural similarity /// 0045055 // regulated secretory pathway // inferred from electronic annotation /// 0048199 // vesicle targeting, to, from or within Golgi // inferred from sequence or structural similarity /// 0048199 // vesicle targeting, to, from or within Golgi // inferred from electronic annotation /// 0048205 // COPI coating of Golgi vesicle // traceable author statement /// 0048208 // COPII vesicle coating // traceable author statement","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from sequence or structural similarity /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005801 // cis-Golgi network // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from sequence or structural similarity /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030137 // COPI-coated vesicle // inferred from sequence or structural similarity /// 0030140 // trans-Golgi network transport vesicle // inferred from sequence or structural similarity /// 0030658 // transport vesicle membrane // inferred from electronic annotation /// 0030667 // secretory granule membrane // inferred from sequence or structural similarity /// 0030667 // secretory granule membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0033116 // endoplasmic reticulum-Golgi intermediate compartment membrane // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0042589 // zymogen granule membrane // inferred from sequence or structural similarity /// 0042589 // zymogen granule membrane // inferred from electronic annotation /// 0070765 // gamma-secretase complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr14:75601202-75643318 (-) // 99.92 // q24.3"]
["11725219_a_at",-0.040006638,-0.03147793,0.0068798065,-0.0068798065,0.04113388,0.01817894,0.49528995,0.12291759,-1.0274104,-0.039012566,1.0274104,"down","SLK",9748.0,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay","chr10:105727469-105788031 (+) // 96.76 // q24.33"]
["11727978_at",-0.08766127,0.102152824,0.10722923,0.015237808,-0.024029732,-0.015237331,0.7965709,0.49776208,1.0342488,0.048583325,1.0342488,"up","SRGAP1",57522.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007266 // Rho protein signal transduction // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0016477 // cell migration // inferred from electronic annotation /// 0032321 // positive regulation of Rho GTPase activity // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005100 // Rho GTPase activator activity // inferred from electronic annotation /// 0017048 // Rho GTPase binding // inferred from electronic annotation","chr12:64237564-64542336 (+) // 88.07 // q14.2"]
["11736352_at",0.086894274,-0.027747631,0.02774787,-0.102502346,0.13655138,-0.22920346,0.7695959,0.44930738,1.0673374,0.09401629,1.0673374,"up","TMEM220",388335.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr17:10616612-10633671 (-) // 68.5 // p13.1"]
["11746047_x_at",0.17320108,-0.008005142,-0.070174694,0.008005142,0.15201902,-0.03025031,0.9699145,0.9055677,-1.0080619,-0.01158421,1.0080619,"down","KGFLP2",654466.0,"0001541 // ovarian follicle development // inferred from electronic annotation /// 0006656 // phosphatidylcholine biosynthetic process // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008654 // phospholipid biosynthetic process // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0031069 // hair follicle morphogenesis // inferred from electronic annotation /// 0042060 // wound healing // inferred from electronic annotation /// 0043129 // surfactant homeostasis // inferred from electronic annotation /// 0050679 // positive regulation of epithelial cell proliferation // inferred from electronic annotation /// 0060445 // branching involved in salivary gland morphogenesis // inferred from electronic annotation /// 0060665 // regulation of branching involved in salivary gland morphogenesis by mesenchymal-epithelial signaling // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation","0005111 // type 2 fibroblast growth factor receptor binding // inferred from electronic annotation /// 0008083 // growth factor activity // inferred from electronic annotation /// 0008201 // heparin binding // inferred from electronic annotation","chr9:46687437-46748386 (+) // 89.17 // p11.2 /// chr9:44245387-44306442 (+) // 87.46 // p11.2 /// chr9:41959735-42019604 (-) // 90.75 // p12 /// chr9:44341479-44402450 (-) // 88.67 // p11.2 /// chr9:46783424-46844349 (-) // 86.38 // p11.2"]
["11733686_a_at",-0.036007404,-0.14591122,0.06778908,0.04245138,0.030077934,-0.030077934,0.783237,0.4710363,-1.0368402,-0.05219356,1.0368402,"down","STRA6",64220.0,"0001568 // blood vessel development // inferred from mutant phenotype /// 0001822 // kidney development // inferred from mutant phenotype /// 0003184 // pulmonary valve morphogenesis // inferred from mutant phenotype /// 0003281 // ventricular septum development // inferred from mutant phenotype /// 0006810 // transport // inferred from electronic annotation /// 0007507 // heart development // inferred from mutant phenotype /// 0007612 // learning // inferred from mutant phenotype /// 0007631 // feeding behavior // inferred from mutant phenotype /// 0030324 // lung development // inferred from mutant phenotype /// 0030325 // adrenal gland development // inferred from mutant phenotype /// 0030540 // female genitalia development // inferred from mutant phenotype /// 0042297 // vocal learning // inferred from mutant phenotype /// 0043583 // ear development // inferred from mutant phenotype /// 0043585 // nose morphogenesis // inferred from mutant phenotype /// 0048286 // lung alveolus development // inferred from mutant phenotype /// 0048520 // positive regulation of behavior // inferred from mutant phenotype /// 0048546 // digestive tract morphogenesis // inferred from mutant phenotype /// 0048566 // embryonic digestive tract development // inferred from mutant phenotype /// 0048589 // developmental growth // inferred from mutant phenotype /// 0048745 // smooth muscle tissue development // inferred from mutant phenotype /// 0048844 // artery morphogenesis // inferred from mutant phenotype /// 0050890 // cognition // inferred from mutant phenotype /// 0050905 // neuromuscular process // inferred from mutant phenotype /// 0060322 // head development // inferred from mutant phenotype /// 0060323 // head morphogenesis // inferred from mutant phenotype /// 0060325 // face morphogenesis // inferred from mutant phenotype /// 0060426 // lung vasculature development // inferred from mutant phenotype /// 0060539 // diaphragm development // inferred from mutant phenotype /// 0060900 // embryonic camera-type eye formation // inferred from mutant phenotype /// 0061029 // eyelid development in camera-type eye // inferred from mutant phenotype /// 0061038 // uterus morphogenesis // inferred from mutant phenotype /// 0061143 // alveolar primary septum development // inferred from mutant phenotype /// 0061156 // pulmonary artery morphogenesis // inferred from mutant phenotype /// 0061205 // paramesonephric duct development // inferred from mutant phenotype","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay","0004872 // receptor activity // inferred from electronic annotation","chr15:74471809-74501371 (-) // 98.94 // q24.1"]
["11716317_at",0.06267834,0.015944004,-0.0074720383,0.0039482117,-0.003947735,-0.0058727264,0.6593463,0.28539076,1.0179553,0.025674216,1.0179553,"up","CYTH2",9266.0,"0006897 // endocytosis // traceable author statement /// 0007155 // cell adhesion // traceable author statement /// 0007229 // integrin-mediated signaling pathway // traceable author statement /// 0016192 // vesicle-mediated transport // not recorded /// 0030036 // actin cytoskeleton organization // traceable author statement /// 0030155 // regulation of cell adhesion // not recorded /// 0032012 // regulation of ARF protein signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005622 // intracellular // non-traceable author statement /// 0005624 // membrane fraction // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005802 // trans-Golgi network // not recorded /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005086 // ARF guanyl-nucleotide exchange factor activity // not recorded /// 0005086 // ARF guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005086 // ARF guanyl-nucleotide exchange factor activity // traceable author statement /// 0005178 // integrin binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation","chr19:48972464-48985234 (+) // 72.44 // q13.33"]
["11738287_at",-0.059696198,0.15015292,-0.1072247,0.058738947,-0.058738947,0.19834518,0.8216975,0.54483724,-1.0509576,-0.07170441,1.0509576,"down","CLEC6A",93978.0,"0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from sequence or structural similarity /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from electronic annotation /// 0045087 // innate immune response // inferred from sequence or structural similarity /// 0045087 // innate immune response // inferred from electronic annotation /// 0050715 // positive regulation of cytokine secretion // inferred from sequence or structural similarity /// 0050715 // positive regulation of cytokine secretion // inferred from electronic annotation /// 0050832 // defense response to fungus // inferred from sequence or structural similarity /// 0050832 // defense response to fungus // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0030246 // carbohydrate binding // inferred from sequence or structural similarity /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr12:8608521-8630946 (+) // 55.14 // p13.31"]
["11737921_a_at",-0.0396266,0.009674072,0.018497229,0.10655904,-0.11509824,-0.009674072,0.9926258,0.97460693,1.0015626,0.002252589,1.0015626,"up","MILR1",284021.0,"0033004 // negative regulation of mast cell activation // inferred from sequence or structural similarity /// 0043303 // mast cell degranulation // inferred from sequence or structural similarity","0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from sequence or structural similarity","chr17:62461568-62464759 (+) // 23.62 // q23.3"]
["11721069_a_at",-8.535385E-4,0.035917282,0.06274605,8.535385E-4,-0.13022327,-0.069610596,0.42313322,0.078631684,1.0709789,0.09893003,1.0709789,"up","DGKD",8527.0,"0006810 // transport // inferred from electronic annotation /// 0006897 // endocytosis // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // non-traceable author statement /// 0007205 // protein kinase C-activating G-protein coupled receptor signaling pathway // non-traceable author statement /// 0007205 // protein kinase C-activating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // non-traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0010033 // response to organic substance // inferred from direct assay /// 0015031 // protein transport // inferred from electronic annotation /// 0016049 // cell growth // non-traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0019932 // second-messenger-mediated signaling // non-traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0046339 // diacylglycerol metabolic process // inferred by curator /// 0046339 // diacylglycerol metabolic process // non-traceable author statement /// 0051260 // protein homooligomerization // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0004143 // diacylglycerol kinase activity // inferred from direct assay /// 0004143 // diacylglycerol kinase activity // traceable author statement /// 0004143 // diacylglycerol kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0019992 // diacylglycerol binding // non-traceable author statement /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from direct assay","chr2:234263153-234380744 (+) // 97.86 // q37.1"]
["11749930_a_at",0.061511993,-0.13767672,-0.123262405,0.06703758,-0.033383846,0.033383846,0.651864,0.27674794,-1.0635011,-0.08882155,1.0635011,"down","AP3M2",10947.0,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation","0005794 // Golgi apparatus // inferred from electronic annotation /// 0030119 // AP-type membrane coat adaptor complex // traceable author statement /// 0030131 // clathrin adaptor complex // inferred from electronic annotation","","chr8:42012131-42026633 (+) // 93.41 // p11.21"]
["11719985_a_at",0.04685211,-0.021233559,0.083251,-2.0980835E-5,-0.10851669,2.0980835E-5,0.5871909,0.20100294,1.0515096,0.072462045,1.0515096,"up","BLOC1S2",282991.0,"0007020 // microtubule nucleation // non-traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0032438 // melanosome organization // non-traceable author statement /// 0042981 // regulation of apoptotic process // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // not recorded /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0060155 // platelet dense granule organization // non-traceable author statement","0000930 // gamma-tubulin complex // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005813 // centrosome // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0031083 // BLOC-1 complex // inferred from direct assay /// 0055037 // recycling endosome // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from electronic annotation /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0043015 // gamma-tubulin binding // inferred from direct assay","chr10:102033712-102046430 (-) // 74.14 // q24.31"]
["11751836_a_at",-0.14888287,0.059214115,-0.11051655,0.20238781,-0.055028915,0.055028915,0.626631,0.2436642,-1.0974772,-0.13419096,1.0974772,"down","GPX6",257202.0,"0006979 // response to oxidative stress // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","0004601 // peroxidase activity // inferred from electronic annotation /// 0004602 // glutathione peroxidase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation","chr6:28471962-28483564 (-) // 100.0 // p22.1"]
["11746862_x_at",0.22339773,0.10099983,0.025928974,-0.15071106,-0.025928974,-0.16951895,0.31260005,0.033648543,1.1745937,0.23216179,1.1745937,"up","ARSJ",79642.0,"0008152 // metabolic process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004065 // arylsulfatase activity // traceable author statement /// 0008484 // sulfuric ester hydrolase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr4:114821399-114900857 (-) // 93.05 // q26"]
["11758143_s_at",0.0038194656,0.0012807846,-0.15093613,-0.071877,0.06978369,-0.0012812614,0.8025327,0.508603,-1.0334632,-0.047487073,1.0334632,"down","DUSP8 /// GLUD1P3","1850 /// 2749","0000188 // inactivation of MAPK activity // not recorded /// 0000188 // inactivation of MAPK activity // traceable author statement /// 0006470 // protein dephosphorylation // not recorded /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0006470 // protein dephosphorylation // traceable author statement /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // traceable author statement /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation","0005634 // nucleus // not recorded /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // not recorded /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // traceable author statement /// 0008138 // protein tyrosine/serine/threonine phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0017017 // MAP kinase tyrosine/serine/threonine phosphatase activity // not recorded /// 0017017 // MAP kinase tyrosine/serine/threonine phosphatase activity // inferred from electronic annotation","chr10:75493120-75493786 (+) // 91.17 // q22.2"]
["11735684_at",0.025445938,-0.025445461,0.0680418,-0.32373428,0.15950537,-0.08613491,0.795865,0.49662814,1.0763412,0.10613542,1.0763412,"up","PPP1R3G",648791.0,"","","","chr6:5085719-5087455 (+) // 99.48 // p25.1"]
["11738173_at",-0.047570705,-0.026607513,-0.2482562,0.09428501,0.0980463,0.026607513,0.41143623,0.07223951,-1.1332434,-0.18045782,1.1332434,"down","TMC2",117532.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr20:2517252-2622430 (+) // 99.59 // p13"]
["11758675_s_at",0.06266165,0.041523933,0.14661694,-0.07706022,-0.041523933,-0.055116177,0.22404106,0.013738645,1.1030521,0.14150098,1.1030521,"up","RABL2A /// RABL2B","11158 /// 11159","0006184 // GTP catabolic process // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation","","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0005525 // GTP binding // inferred from electronic annotation","chr2:114395643-114398943 (+) // 94.91 // q13 /// chr22:51208332-51211276 (-) // 91.27 // q13.33"]
["11722799_a_at",-0.04483795,-0.06845093,0.13108253,0.02300644,-0.015317917,0.015317917,0.9937745,0.97964865,-1.0012051,-0.0017375259,1.0012051,"down","SS18",6760.0,"0000226 // microtubule cytoskeleton organization // inferred from electronic annotation /// 0000902 // cell morphogenesis // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007010 // cytoskeleton organization // inferred from electronic annotation /// 0007243 // intracellular protein kinase cascade // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0048013 // ephrin receptor signaling pathway // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005881 // cytoplasmic microtubule // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0030374 // ligand-dependent nuclear receptor transcription coactivator activity // inferred from direct assay","chr18:23596216-23670601 (-) // 89.25 // q11.2"]
["11737223_a_at",0.02817154,-0.019057274,0.019057274,0.20006609,-0.18283081,-0.09241724,0.9269923,0.7820741,1.0241672,0.03445123,1.0241672,"up","ARTN",9048.0,"0007165 // signal transduction // traceable author statement /// 0007405 // neuroblast proliferation // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007411 // axon guidance // inferred from electronic annotation /// 0007422 // peripheral nervous system development // inferred from electronic annotation /// 0050930 // induction of positive chemotaxis // inferred from electronic annotation /// 0061146 // Peyer's patch morphogenesis // inferred from electronic annotation /// 0097021 // lymphocyte migration into lymphoid organs // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation","0005102 // receptor binding // traceable author statement /// 0005102 // receptor binding // inferred from electronic annotation /// 0008083 // growth factor activity // inferred from electronic annotation","chr1:44398991-44402912 (+) // 95.2 // p34.1"]
["11717089_x_at",-0.010637283,0.010637283,0.044021606,0.028966904,-0.015169144,-0.036087036,0.7561766,0.42508876,1.015439,0.022103623,1.015439,"up","RBM39",9584.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006396 // RNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr20:34291328-34330238 (-) // 83.17 // q11.22"]
["11730220_a_at",-0.01020813,-0.038975716,0.16797161,0.01020813,0.09271622,-0.06663895,0.91186255,0.74655944,1.0192449,0.02750075,1.0192449,"up","SPG20",23111.0,"0008219 // cell death // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0031625 // ubiquitin protein ligase binding // inferred from physical interaction","chr13:36875776-36920646 (-) // 78.83 // q13.3"]
["11755823_a_at",0.023155212,0.051358223,-0.03549671,-0.023155212,-0.024970531,0.09510541,0.987229,0.9578958,-1.0018415,-0.0026543445,1.0018415,"down","SYT9",143425.0,"0006810 // transport // inferred from electronic annotation /// 0017158 // regulation of calcium ion-dependent exocytosis // inferred from electronic annotation /// 0050796 // regulation of insulin secretion // inferred from electronic annotation","0008021 // synaptic vesicle // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030667 // secretory granule membrane // inferred from electronic annotation /// 0030672 // synaptic vesicle membrane // inferred from electronic annotation /// 0031045 // dense core granule // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:7273400-7490268 (+) // 99.75 // p15.4"]
["11729361_x_at",0.09740567,0.052571774,-0.030595303,-0.0456357,-0.09440446,0.030595303,0.60499376,0.21805605,1.0542928,0.07627559,1.0542928,"up","DIO1",1733.0,"0006590 // thyroid hormone generation // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042446 // hormone biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004800 // thyroxine 5'-deiodinase activity // inferred from electronic annotation /// 0004800 // thyroxine 5'-deiodinase activity // traceable author statement /// 0008430 // selenium binding // inferred from electronic annotation /// 0008430 // selenium binding // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation","chr1:54359859-54376759 (+) // 98.99 // p32.3"]
["11752201_s_at",-0.007906914,0.007906914,-0.09717035,0.1650033,-0.007906914,0.038057804,0.57251847,0.18647458,-1.0698744,-0.09744144,1.0698744,"down","SP140 /// SP140L","11262 /// 93349","0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006952 // defense response // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005635 // nuclear envelope // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:231090444-231223762 (+) // 99.66 // q37.1"]
["11738170_a_at",-0.031053543,0.0,0.029939175,-0.1465652,0.034086466,0.0,0.8282141,0.5579274,1.0260645,0.037121445,1.0260645,"up","ADCYAP1",116.0,"0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // traceable author statement /// 0007190 // activation of adenylate cyclase activity // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0007565 // female pregnancy // traceable author statement /// 0008277 // regulation of G-protein coupled receptor protein signaling pathway // inferred from direct assay /// 0010579 // positive regulation of adenylate cyclase activity involved in G-protein coupled receptor signaling pathway // inferred from direct assay /// 0032880 // regulation of protein localization // inferred from direct assay /// 0045786 // negative regulation of cell cycle // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005625 // soluble fraction // traceable author statement","0005057 // receptor signaling protein activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from physical interaction /// 0005179 // hormone activity // inferred from electronic annotation /// 0005184 // neuropeptide hormone activity // traceable author statement /// 0016521 // pituitary adenylate cyclase activating polypeptide activity // inferred from direct assay /// 0051428 // peptide hormone receptor binding // inferred from direct assay /// 0051428 // peptide hormone receptor binding // inferred from physical interaction","chr18:905296-912173 (+) // 94.59 // p11.32"]
["11738330_at",9.0169907E-4,0.055835724,-0.13113308,-9.0169907E-4,0.07174301,-0.13018799,0.9862097,0.953605,-1.003483,-0.005016258,1.003483,"down","IL17REL",400935.0,"","","","chr22:50432941-50451088 (-) // 97.16 // q13.33"]
["11722108_at",0.16313171,-0.12021446,-0.04466915,-0.10319376,0.07522488,0.04466915,0.9863795,0.95438457,-1.0042725,-0.006150728,1.0042725,"down","PCNX",22990.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr14:71374121-71582098 (+) // 96.22 // q24.2"]
["11755984_a_at",-0.010447502,0.046762466,0.21702194,0.010447979,-0.08592701,-0.18365145,0.49875283,0.12532702,1.1257,0.1708224,1.1257,"up","TRIML2",205860.0,"0016567 // protein ubiquitination // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation","chr4:189012526-189022404 (-) // 83.98 // q35.2"]
["11721797_at",0.039437294,0.0016822815,0.089912415,-0.0950222,-0.055229187,-0.0016822815,0.39486134,0.06432593,1.0675635,0.09432193,1.0675635,"up","SUMO3",6612.0,"0016925 // protein sumoylation // inferred from direct assay /// 0016925 // protein sumoylation // inferred from electronic annotation","0000776 // kinetochore // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0019789 // SUMO ligase activity // inferred from electronic annotation","chr21:46225533-46238945 (-) // 69.03 // q22.3"]
["11747574_a_at",0.09795046,-0.06573725,0.27320337,0.040976048,-0.040976048,-0.047356606,0.6804881,0.31280956,1.0849218,0.117591105,1.0849218,"up","C1orf109",54955.0,"","","","chr1:38147359-38157921 (-) // 88.62 // p34.3"]
["11754236_a_at",-0.09758282,0.0,0.04218006,0.0,-0.03359604,0.032500267,0.8967265,0.7115086,-1.0126266,-0.018102355,1.0126266,"down","PTPRF",5792.0,"0001960 // negative regulation of cytokine-mediated signaling pathway // inferred from electronic annotation /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from electronic annotation /// 0007185 // transmembrane receptor protein tyrosine phosphatase signaling pathway // traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0031345 // negative regulation of cell projection organization // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from direct assay /// 0035335 // peptidyl-tyrosine dephosphorylation // traceable author statement /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation /// 0042059 // negative regulation of epidermal growth factor receptor signaling pathway // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043525 // positive regulation of neuron apoptotic process // inferred from electronic annotation /// 0046627 // negative regulation of insulin receptor signaling pathway // inferred from electronic annotation /// 0050775 // positive regulation of dendrite morphogenesis // inferred from electronic annotation /// 0050803 // regulation of synapse structure and activity // inferred from electronic annotation /// 0051387 // negative regulation of nerve growth factor receptor signaling pathway // inferred from electronic annotation","0005624 // membrane fraction // inferred from electronic annotation /// 0005626 // insoluble fraction // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030426 // growth cone // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0060076 // excitatory synapse // inferred from electronic annotation","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from direct assay /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0005001 // transmembrane receptor protein tyrosine phosphatase activity // inferred from electronic annotation /// 0005001 // transmembrane receptor protein tyrosine phosphatase activity // traceable author statement /// 0005158 // insulin receptor binding // inferred from electronic annotation /// 0008201 // heparin binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0030971 // receptor tyrosine kinase binding // inferred from electronic annotation /// 0042301 // phosphate ion binding // inferred from electronic annotation","chr1:43996544-44089334 (+) // 94.56 // p34.2"]
["11726708_a_at",-0.028220177,0.115207195,0.010837078,0.03367567,-0.010837078,-0.045606613,0.7727782,0.4544208,1.0282545,0.0401974,1.0282545,"up","FAM195B",348262.0,"","","","chr17:79780302-79782432 (-) // 80.35 // q25.3"]
["11731586_at",-0.01786089,0.01786089,-0.15073323,-0.055960655,0.10592985,0.26839828,0.6041186,0.21688095,-1.114477,-0.15636688,1.114477,"down","DOK3",79930.0,"0007265 // Ras protein signal transduction // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005158 // insulin receptor binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation","chr5:176930087-176937404 (-) // 91.2 // q35.3"]
["11731926_a_at",-0.038482428,0.01944232,0.15137863,0.00834012,-0.00834012,-0.023978472,0.7472909,0.41198078,1.036777,0.052105647,1.036777,"up","TRPM3",80036.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // inferred from direct assay /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0070588 // calcium ion transmembrane transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005261 // cation channel activity // inferred from direct assay /// 0005262 // calcium channel activity // inferred from electronic annotation","chr9:73398775-73483989 (-) // 97.9 // q21.12"]
["11721647_a_at",-0.01854992,-0.11438894,-0.06280184,0.01854992,0.077290535,0.03193903,0.30104834,0.030582132,-1.0776137,-0.10784011,1.0776137,"down","CTNND1 /// TMX2-CTNND1","100528016 /// 1500","0001738 // morphogenesis of a polarized epithelium // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007155 // cell adhesion // non-traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007435 // salivary gland morphogenesis // inferred from electronic annotation /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0016337 // cell-cell adhesion // inferred from electronic annotation /// 0030216 // keratinocyte differentiation // inferred from electronic annotation /// 0034329 // cell junction assembly // traceable author statement /// 0034332 // adherens junction organization // traceable author statement /// 0045216 // cell-cell junction organization // traceable author statement /// 0060690 // epithelial cell differentiation involved in salivary gland development // inferred from electronic annotation /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from mutant phenotype","0005624 // membrane fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from mutant phenotype /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from mutant phenotype /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from direct assay /// 0005913 // cell-cell adherens junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030496 // midbody // inferred from direct assay","0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0019903 // protein phosphatase binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0042153 // RPTP-like protein binding // inferred from electronic annotation /// 0045296 // cadherin binding // inferred from physical interaction","chr11:57529233-57587018 (+) // 97.84 // q12.1"]
["11750767_x_at",0.03604698,-0.04646063,-0.10221434,0.06429863,-0.03604698,0.05743265,0.64590144,0.26922694,-1.0468858,-0.06610414,1.0468858,"down","SLC17A7",57030.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006811 // ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0006817 // phosphate ion transport // traceable author statement /// 0006817 // phosphate ion transport // inferred from electronic annotation /// 0006836 // neurotransmitter transport // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007268 // synaptic transmission // inferred from electronic annotation /// 0007269 // neurotransmitter secretion // traceable author statement /// 0007616 // long-term memory // inferred from electronic annotation /// 0014047 // glutamate secretion // traceable author statement /// 0015813 // L-glutamate transport // traceable author statement /// 0035249 // synaptic transmission, glutamatergic // inferred from electronic annotation /// 0042137 // sequestering of neurotransmitter // inferred from electronic annotation /// 0044341 // sodium-dependent phosphate transport // traceable author statement /// 0044341 // sodium-dependent phosphate transport // inferred from electronic annotation /// 0051938 // L-glutamate import // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0060079 // regulation of excitatory postsynaptic membrane potential // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0019717 // synaptosome // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030672 // synaptic vesicle membrane // traceable author statement /// 0030672 // synaptic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0048786 // presynaptic active zone // inferred from electronic annotation /// 0060076 // excitatory synapse // inferred from electronic annotation /// 0060203 // clathrin sculpted glutamate transport vesicle membrane // traceable author statement","0005313 // L-glutamate transmembrane transporter activity // traceable author statement /// 0005315 // inorganic phosphate transmembrane transporter activity // inferred from electronic annotation /// 0015293 // symporter activity // inferred from electronic annotation /// 0015319 // sodium:inorganic phosphate symporter activity // inferred from direct assay /// 0015321 // sodium-dependent phosphate transmembrane transporter activity // inferred from electronic annotation /// 0015321 // sodium-dependent phosphate transmembrane transporter activity // traceable author statement","chr19:49933242-49945617 (-) // 99.96 // q13.33"]
["11730863_at",0.053726673,-0.008247852,0.0013055801,-0.0013055801,0.053726673,-0.032208443,0.9307183,0.7935648,1.0061582,0.008857207,1.0061582,"up","CTTNBP2NL",55917.0,"","0015629 // actin cytoskeleton // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr1:112938652-113003786 (+) // 89.04 // p13.2"]
["11738942_at",0.036658525,-0.0125153065,-0.065157175,-0.09576678,0.2454102,0.0125153065,0.82609826,0.5535593,-1.0480621,-0.06772418,1.0480621,"down","KRTAP27-1",643812.0,"","0005882 // intermediate filament // inferred from electronic annotation","","chr21:31709330-31710012 (-) // 100.0 // q22.11"]
["11717122_s_at",0.025082588,0.046267986,-0.025082588,-0.19616365,-0.05385685,0.027864933,0.6415995,0.2632313,1.0639826,0.08947457,1.0639826,"up","C6orf106",64771.0,"","","","chr6:34555064-34664625 (-) // 97.04 // p21.31"]
["11747809_a_at",0.07712841,-0.032173157,0.07287884,0.032173157,-0.10102749,-0.29387856,0.57435817,0.1885159,1.1174335,0.16018903,1.1174335,"up","PFKFB4",5210.0,"0005975 // carbohydrate metabolic process // traceable author statement /// 0006000 // fructose metabolic process // inferred from electronic annotation /// 0006003 // fructose 2,6-bisphosphate metabolic process // inferred from electronic annotation /// 0006003 // fructose 2,6-bisphosphate metabolic process // non-traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006096 // glycolysis // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement","0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0003873 // 6-phosphofructo-2-kinase activity // inferred from electronic annotation /// 0003873 // 6-phosphofructo-2-kinase activity // non-traceable author statement /// 0004331 // fructose-2,6-bisphosphate 2-phosphatase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from electronic annotation","chr3:48556927-48598605 (-) // 98.76 // p21.31"]
["11750638_a_at",0.052983284,0.006752014,0.13712597,-0.022418976,-0.038960457,-0.006752014,0.43760675,0.08776114,1.0631394,0.08833083,1.0631394,"up","SF3A1",10291.0,"0000389 // nuclear mRNA 3'-splice site recognition // traceable author statement /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred from direct assay /// 0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0006396 // RNA processing // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from mutant phenotype /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from direct assay /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005684 // U2-type spliceosomal complex // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay","0003723 // RNA binding // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr22:30730124-30752911 (-) // 98.73 // q12.2"]
["11761170_at",-0.2588327,-0.2929244,-0.1124084,0.11240816,0.24131155,0.15897131,0.14570753,0.0042411936,-1.312471,-0.3922856,1.312471,"down","ACAN",176.0,"0001501 // skeletal system development // non-traceable author statement /// 0001502 // cartilage condensation // inferred from electronic annotation /// 0001503 // ossification // inferred from electronic annotation /// 0002063 // chondrocyte development // inferred from electronic annotation /// 0006508 // proteolysis // non-traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007417 // central nervous system development // inferred from electronic annotation /// 0009314 // response to radiation // inferred from electronic annotation /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0009629 // response to gravity // inferred from electronic annotation /// 0009749 // response to glucose stimulus // inferred from electronic annotation /// 0010259 // multicellular organismal aging // inferred from electronic annotation /// 0010447 // response to acidity // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0021510 // spinal cord development // inferred from electronic annotation /// 0030166 // proteoglycan biosynthetic process // inferred from electronic annotation /// 0030199 // collagen fibril organization // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0060591 // chondroblast differentiation // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005604 // basement membrane // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from electronic annotation /// 0072534 // perineuronal net // inferred from electronic annotation","0005201 // extracellular matrix structural constituent // traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005540 // hyaluronic acid binding // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr15:89346673-89394754 (+) // 82.25 // q26.1"]
["11728526_at",-0.05429554,-0.18127155,-0.005905628,0.005905628,0.03122282,0.21547699,0.4951287,0.122241005,-1.1209273,-0.16469276,1.1209273,"down","PEX5L",51555.0,"0016558 // protein import into peroxisome matrix // not recorded /// 0042391 // regulation of membrane potential // inferred from electronic annotation /// 0043949 // regulation of cAMP-mediated signaling // inferred from sequence or structural similarity /// 0045055 // regulated secretory pathway // inferred from electronic annotation /// 0045185 // maintenance of protein location // inferred from electronic annotation /// 0051461 // positive regulation of corticotropin secretion // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005778 // peroxisomal membrane // not recorded /// 0005829 // cytosol // not recorded /// 0016020 // membrane // inferred from electronic annotation /// 0017071 // intracellular cyclic nucleotide activated cation channel complex // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0051286 // cell tip // inferred from electronic annotation","0000268 // peroxisome targeting sequence binding // inferred from direct assay /// 0005052 // peroxisome matrix targeting signal-1 binding // not recorded /// 0005221 // intracellular cyclic nucleotide activated cation channel activity // inferred from electronic annotation /// 0017137 // Rab GTPase binding // inferred from electronic annotation /// 0031267 // small GTPase binding // inferred from physical interaction","chr3:179517849-179754841 (-) // 97.57 // q26.33"]
["11736375_a_at",-0.001298666,0.001298666,-0.15620375,-0.0953033,0.09310293,0.04858899,0.7591431,0.4305269,-1.0479217,-0.06753086,1.0479217,"down","CD86",942.0,"0002224 // toll-like receptor signaling pathway // inferred from electronic annotation /// 0006955 // immune response // traceable author statement /// 0007267 // cell-cell signaling // inferred by curator /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0031295 // T cell costimulation // traceable author statement /// 0042110 // T cell activation // inferred by curator /// 0042113 // B cell activation // inferred from electronic annotation /// 0043017 // positive regulation of lymphotoxin A biosynthetic process // non-traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045086 // positive regulation of interleukin-2 biosynthetic process // non-traceable author statement /// 0045404 // positive regulation of interleukin-4 biosynthetic process // non-traceable author statement /// 0045630 // positive regulation of T-helper 2 cell differentiation // non-traceable author statement /// 0045893 // positive regulation of transcription, DNA-dependent // non-traceable author statement /// 0051607 // defense response to virus // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // non-traceable author statement /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred by curator /// 0016021 // integral to membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation","0004872 // receptor activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0015026 // coreceptor activity // non-traceable author statement","chr3:121774179-121839982 (+) // 97.2 // q13.33"]
["11740470_x_at",-0.006300926,-0.05210209,-0.007923126,0.035964966,0.006300926,0.02875042,0.38186878,0.058685675,-1.0322417,-0.04578082,1.0322417,"down","HM13",81502.0,"0006508 // proteolysis // inferred from electronic annotation /// 0006509 // membrane protein ectodomain proteolysis // inferred from mutant phenotype /// 0031293 // membrane protein intracellular domain proteolysis // inferred from mutant phenotype /// 0033619 // membrane protein proteolysis // inferred from direct assay","0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005791 // rough endoplasmic reticulum // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0071458 // integral to cytosolic side of endoplasmic reticulum membrane // inferred from direct assay /// 0071556 // integral to lumenal side of endoplasmic reticulum membrane // inferred from direct assay","0004190 // aspartic-type endopeptidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from direct assay /// 0008233 // peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042500 // aspartic endopeptidase activity, intramembrane cleaving // inferred from mutant phenotype /// 0042803 // protein homodimerization activity // inferred from direct assay","chr20:30102240-30157368 (+) // 99.37 // q11.21"]
["11761030_x_at",0.15454865,-0.26706743,-0.04658699,-0.25841904,0.10549474,0.04658699,0.975127,0.92069495,-1.0122668,-0.017589523,1.0122668,"down","SLC11A1",6556.0,"0000060 // protein import into nucleus, translocation // inferred from electronic annotation /// 0001818 // negative regulation of cytokine production // inferred from sequence or structural similarity /// 0001818 // negative regulation of cytokine production // inferred from electronic annotation /// 0001819 // positive regulation of cytokine production // inferred from sequence or structural similarity /// 0001819 // positive regulation of cytokine production // inferred from electronic annotation /// 0002309 // T cell proliferation involved in immune response // inferred from sequence or structural similarity /// 0002309 // T cell proliferation involved in immune response // inferred from electronic annotation /// 0002369 // T cell cytokine production // inferred from sequence or structural similarity /// 0002369 // T cell cytokine production // inferred from electronic annotation /// 0002606 // positive regulation of dendritic cell antigen processing and presentation // inferred from sequence or structural similarity /// 0002606 // positive regulation of dendritic cell antigen processing and presentation // inferred from electronic annotation /// 0002827 // positive regulation of T-helper 1 type immune response // inferred from sequence or structural similarity /// 0002827 // positive regulation of T-helper 1 type immune response // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006826 // iron ion transport // inferred from mutant phenotype /// 0006826 // iron ion transport // inferred from electronic annotation /// 0006828 // manganese ion transport // inferred from sequence or structural similarity /// 0006828 // manganese ion transport // inferred from electronic annotation /// 0006876 // cellular cadmium ion homeostasis // inferred from genetic interaction /// 0006879 // cellular iron ion homeostasis // inferred from mutant phenotype /// 0006909 // phagocytosis // inferred from sequence or structural similarity /// 0006909 // phagocytosis // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from sequence or structural similarity /// 0006954 // inflammatory response // inferred from electronic annotation /// 0006955 // immune response // non-traceable author statement /// 0007035 // vacuolar acidification // inferred from sequence or structural similarity /// 0007035 // vacuolar acidification // inferred from electronic annotation /// 0009617 // response to bacterium // inferred from direct assay /// 0010628 // positive regulation of gene expression // inferred from sequence or structural similarity /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0015707 // nitrite transport // inferred from sequence or structural similarity /// 0015707 // nitrite transport // inferred from electronic annotation /// 0032147 // activation of protein kinase activity // inferred from sequence or structural similarity /// 0032147 // activation of protein kinase activity // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from sequence or structural similarity /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0032623 // interleukin-2 production // inferred from sequence or structural similarity /// 0032623 // interleukin-2 production // inferred from electronic annotation /// 0032632 // interleukin-3 production // inferred from sequence or structural similarity /// 0032632 // interleukin-3 production // inferred from electronic annotation /// 0032729 // positive regulation of interferon-gamma production // inferred from sequence or structural similarity /// 0032729 // positive regulation of interferon-gamma production // inferred from electronic annotation /// 0034341 // response to interferon-gamma // inferred from sequence or structural similarity /// 0034341 // response to interferon-gamma // inferred from electronic annotation /// 0042060 // wound healing // inferred from sequence or structural similarity /// 0042060 // wound healing // inferred from electronic annotation /// 0042116 // macrophage activation // inferred from sequence or structural similarity /// 0042116 // macrophage activation // inferred from electronic annotation /// 0042742 // defense response to bacterium // inferred from sequence or structural similarity /// 0042742 // defense response to bacterium // inferred from electronic annotation /// 0042832 // defense response to protozoan // inferred from sequence or structural similarity /// 0042832 // defense response to protozoan // inferred from electronic annotation /// 0043091 // L-arginine import // inferred from sequence or structural similarity /// 0043091 // L-arginine import // inferred from electronic annotation /// 0045342 // MHC class II biosynthetic process // inferred from sequence or structural similarity /// 0045342 // MHC class II biosynthetic process // inferred from electronic annotation /// 0045730 // respiratory burst // inferred from sequence or structural similarity /// 0045730 // respiratory burst // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048002 // antigen processing and presentation of peptide antigen // inferred from sequence or structural similarity /// 0048002 // antigen processing and presentation of peptide antigen // inferred from electronic annotation /// 0048255 // mRNA stabilization // inferred from sequence or structural similarity /// 0048255 // mRNA stabilization // inferred from electronic annotation /// 0050766 // positive regulation of phagocytosis // inferred from sequence or structural similarity /// 0050766 // positive regulation of phagocytosis // inferred from electronic annotation /// 0050829 // defense response to Gram-negative bacterium // inferred from sequence or structural similarity /// 0050829 // defense response to Gram-negative bacterium // inferred from electronic annotation /// 0055072 // iron ion homeostasis // inferred from sequence or structural similarity /// 0055072 // iron ion homeostasis // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0060586 // multicellular organismal iron ion homeostasis // inferred from sequence or structural similarity /// 0060586 // multicellular organismal iron ion homeostasis // inferred from electronic annotation /// 0070574 // cadmium ion transmembrane transport // inferred from genetic interaction /// 0070839 // divalent metal ion export // inferred from sequence or structural similarity /// 0070839 // divalent metal ion export // inferred from electronic annotation /// 0071421 // manganese ion transmembrane transport // inferred from sequence or structural similarity /// 0071421 // manganese ion transmembrane transport // inferred from electronic annotation","0005764 // lysosome // inferred from sequence or structural similarity /// 0005764 // lysosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from sequence or structural similarity /// 0005770 // late endosome // inferred from electronic annotation /// 0005773 // vacuole // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from mutant phenotype /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0009279 // cell outer membrane // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030670 // phagocytic vesicle membrane // inferred from direct assay /// 0030670 // phagocytic vesicle membrane // inferred from electronic annotation /// 0031902 // late endosome membrane // traceable author statement /// 0070821 // tertiary granule membrane // inferred from direct assay","0005215 // transporter activity // inferred from electronic annotation /// 0005384 // manganese ion transmembrane transporter activity // inferred from sequence or structural similarity /// 0005384 // manganese ion transmembrane transporter activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046915 // transition metal ion transmembrane transporter activity // inferred from genetic interaction /// 0051139 // metal ion:hydrogen antiporter activity // inferred from genetic interaction","chr2:219246973-219252721 (+) // 84.15 // q35"]
["11759173_at",0.22916913,0.08007431,0.0052547455,-0.005254984,-0.1481278,-0.0514009,0.4431037,0.09105632,1.1274738,0.17309394,1.1274738,"up","KRTAP20-1",337975.0,"","0005882 // intermediate filament // inferred from electronic annotation","","chr21:31988743-31989018 (+) // 100.0 // q22.11"]
["11716441_at",-0.108771324,-0.086019516,0.011116028,-0.011116028,0.11172104,0.021440506,0.49398455,0.12145922,-1.0731909,-0.10190676,1.0731909,"down","USO1",8615.0,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006944 // cellular membrane fusion // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0045056 // transcytosis // inferred from electronic annotation /// 0048193 // Golgi vesicle transport // inferred from electronic annotation /// 0048280 // vesicle fusion with Golgi apparatus // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0000139 // Golgi membrane // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0008565 // protein transporter activity // inferred from electronic annotation","chr4:76649705-76735431 (+) // 94.85 // q21.1"]
["11756038_x_at",0.0293293,0.015892506,-0.0688467,0.0739789,-0.015892506,-0.08268833,0.9984952,0.9955439,1.0002258,3.2569838E-4,1.0002258,"up","ATP2B4",493.0,"0003407 // neural retina development // inferred from electronic annotation /// 0006754 // ATP biosynthetic process // inferred from electronic annotation /// 0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0034220 // ion transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0070588 // calcium ion transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0005388 // calcium-transporting ATPase activity // inferred from electronic annotation /// 0005388 // calcium-transporting ATPase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0015662 // ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016820 // hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances // inferred from electronic annotation /// 0030165 // PDZ domain binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:203691769-203708746 (+) // 100.0 // q32.1"]
["11757353_a_at",0.025521278,0.05300474,-0.11207104,-0.05300474,-0.025521278,0.14704132,0.8892958,0.6953313,-1.0238612,-0.034020107,1.0238612,"down","FBXO25",26260.0,"0016567 // protein ubiquitination // inferred from sequence or structural similarity /// 0016567 // protein ubiquitination // non-traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation","0000151 // ubiquitin ligase complex // non-traceable author statement /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0019005 // SCF ubiquitin ligase complex // inferred from sequence or structural similarity","0003779 // actin binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein ligase activity // non-traceable author statement","chr8:413035-419054 (+) // 96.19 // p23.3"]
["11732587_at",0.0341444,0.21566749,-0.03414464,-0.108973265,0.11633444,-0.03414464,0.7785482,0.4631885,1.0576167,0.08081687,1.0576167,"up","GRID1",2894.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0035235 // ionotropic glutamate receptor signaling pathway // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030288 // outer membrane-bounded periplasmic space // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004970 // ionotropic glutamate receptor activity // inferred from electronic annotation /// 0005215 // transporter activity // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005234 // extracellular-glutamate-gated ion channel activity // inferred from electronic annotation","chr10:87359310-88126458 (-) // 95.43 // q23.1"]
["11736710_a_at",0.008628845,0.0,0.2433157,0.0,-0.19583225,-0.16783428,0.4762926,0.11060943,1.1528491,0.20520365,1.1528491,"up","DENND4A",10260.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation","chr15:65952958-66084631 (-) // 99.5 // q22.31"]
["11741825_at",0.029679298,-0.083283424,0.23425674,-0.029679298,0.04409933,-0.19471264,0.7142709,0.36081952,1.0869722,0.12031509,1.0869722,"up","GBX1",2636.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0000228 // nuclear chromosome // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr7:150845675-150864867 (-) // 90.13 // q36.1"]
["11721495_a_at",0.010306358,0.0018825531,0.051154137,-0.008383751,-0.0018825531,-0.068935394,0.5236698,0.1441505,1.0334831,0.047514863,1.0334831,"up","SFT2D3 /// WDR33","55339 /// 84826","0006301 // postreplication repair // non-traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0007283 // spermatogenesis // non-traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation","0005581 // collagen // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr2:128461762-128568761 (-) // 95.37 // q14.3"]
["11753478_x_at",-0.12439823,0.003610611,-0.003610611,0.003610611,0.30957127,-0.08192301,0.73945296,0.39962506,-1.085645,-0.11855237,1.085645,"down","CCDC24",149473.0,"","","","chr1:44457550-44461832 (+) // 99.88 // p34.1"]
["11717014_x_at",0.019957542,0.010266304,0.0036344528,-0.026298523,-0.0036344528,-0.06641483,0.43180546,0.083904624,1.0305411,0.04340199,1.0305411,"up","SNRPF",6636.0,"0000387 // spliceosomal snRNP assembly // traceable author statement /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006396 // RNA processing // inferred from electronic annotation /// 0006397 // mRNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008334 // histone mRNA metabolic process // traceable author statement /// 0008380 // RNA splicing // inferred from mutant phenotype /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0034660 // ncRNA metabolic process // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from direct assay /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005683 // U7 snRNP // inferred from direct assay /// 0005689 // U12-type spliceosomal complex // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0030532 // small nuclear ribonucleoprotein complex // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay","0003723 // RNA binding // inferred from mutant phenotype /// 0003723 // RNA binding // inferred from electronic annotation","chr12:96252743-96260876 (+) // 89.32 // q23.1"]
["11758209_s_at",-0.034456253,-0.03380871,-0.02066946,0.032852173,0.05310774,0.02066946,0.13506666,0.003391643,-1.0462213,-0.06518798,1.0462213,"down","ZNF644",84146.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:91406469-91487522 (-) // 100.0 // p22.2"]
["11736588_a_at",-0.01628685,0.095644474,0.08829212,-0.11831212,0.016287088,-0.16650319,0.44265085,0.09085119,1.1060317,0.14539267,1.1060317,"up","CTNNA3",29119.0,"0007155 // cell adhesion // inferred from electronic annotation /// 0016337 // cell-cell adhesion // inferred from electronic annotation /// 0016337 // cell-cell adhesion // inferred from physical interaction","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005916 // fascia adherens // inferred from direct assay /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation","0005198 // structural molecule activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0045296 // cadherin binding // inferred from electronic annotation /// 0045296 // cadherin binding // traceable author statement","chr10:67679790-69455951 (-) // 95.63 // q21.3"]
["11721827_a_at",0.005176544,0.02103281,0.14303398,-0.005177021,-0.04667902,-0.106750965,0.46961913,0.10627487,1.0786923,0.10928341,1.0786923,"up","ZWILCH",55055.0,"0000087 // M phase of mitotic cell cycle // traceable author statement /// 0000236 // mitotic prometaphase // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0007093 // mitotic cell cycle checkpoint // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from direct assay /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0005515 // protein binding // inferred from physical interaction","chr15:66797430-66841897 (+) // 97.49 // q22.31"]
["11762850_at",-0.17202711,0.09472895,0.038511753,-0.038511753,0.09281969,-0.04244566,0.95558506,0.86413753,-1.0117711,-0.016882911,1.0117711,"down","ESPNP",284729.0,"","","0003779 // actin binding // inferred from electronic annotation","chr1:6497627-6501491 (+) // 87.02 // p36.31 /// chr1:17033418-17037114 (-) // 80.36 // p36.13"]
["11749410_x_at",-0.05885601,0.093753815,0.17901468,-0.08387995,0.026058674,-0.026058674,0.6422963,0.26410618,1.071227,0.09926417,1.071227,"up","DMKN",93099.0,"","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation","","chr19:35989617-36001337 (-) // 97.9 // q13.12"]
["11729479_a_at",-0.0051517487,0.0051517487,0.18549585,-0.12630725,0.11288738,-0.21080184,0.6719965,0.30074522,1.0992904,0.13657251,1.0992904,"up","CLEC12A",160364.0,"","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr12:10124007-10138056 (+) // 56.83 // p13.2"]
["11762916_at",-0.014037132,-0.002523899,0.06849003,0.002523899,0.06390715,-0.017647743,0.99333394,0.9779133,1.000727,0.001048541,1.000727,"up","IZUMO1",284359.0,"0007155 // cell adhesion // inferred by curator /// 0007342 // fusion of sperm to egg plasma membrane // inferred from direct assay /// 0007342 // fusion of sperm to egg plasma membrane // inferred from electronic annotation","0002080 // acrosomal membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation","0042803 // protein homodimerization activity // inferred from sequence or structural similarity /// 0042803 // protein homodimerization activity // inferred from electronic annotation","chr19:49244164-49249116 (-) // 99.7 // q13.33"]
["11722794_at",0.0922966,0.02283001,0.054320335,-0.02283001,-0.040730476,-0.11155605,0.28754663,0.02712759,1.0828658,0.11485451,1.0828658,"up","GDE1",51573.0,"0006071 // glycerol metabolic process // inferred from electronic annotation /// 0006629 // lipid metabolic process // traceable author statement /// 0006629 // lipid metabolic process // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0008081 // phosphoric diester hydrolase activity // inferred from electronic annotation /// 0008889 // glycerophosphodiester phosphodiesterase activity // traceable author statement /// 0008889 // glycerophosphodiester phosphodiesterase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047395 // glycerophosphoinositol glycerophosphodiesterase activity // inferred from electronic annotation","chr16:19513014-19533439 (-) // 76.04 // p12.3"]
["11756183_x_at",0.021371841,0.040543556,0.038957596,-0.021371841,-0.04890442,-0.030755043,0.123146504,0.002685065,1.047755,0.06730141,1.047755,"up","SLC25A11",8402.0,"0005975 // carbohydrate metabolic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006094 // gluconeogenesis // traceable author statement /// 0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0015742 // alpha-ketoglutarate transport // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation /// 0015367 // oxoglutarate:malate antiporter activity // traceable author statement","chr17:4840612-4843465 (-) // 98.55 // p13.2"]
["11745559_a_at",-0.024616718,0.12941289,-0.07241893,0.013789654,-0.013789654,0.09868693,0.92070895,0.76691264,-1.0154388,-0.022103284,1.0154388,"down","C2orf73",129852.0,"","","","chr2:54558070-54588714 (+) // 90.54 // p16.2"]
["11760650_a_at",-0.059324503,0.18210912,-0.17420173,0.07551265,-0.23810959,0.059324503,0.9721287,0.91167575,1.0120531,0.017285032,1.0120531,"up","ANKRD37",353322.0,"","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","","chr4:186317964-186321782 (+) // 99.59 // q35.1"]
["11763416_at",0.33867645,-0.16251802,0.06304312,0.13861942,-0.070446014,-0.06304312,0.87063,0.65189475,1.0555711,0.07802373,1.0555711,"up","KBTBD3",143879.0,"","","","chr11:105944802-105948155 (-) // 59.3 // q22.3"]
["AFFX-DapX-5_at",-5.5122375E-4,-0.05844164,5.5122375E-4,0.048916817,-0.0028243065,0.047480106,0.49412388,0.121689014,-1.0357468,-0.05067138,1.0357468,"down",5.5122375E-4,"","","0001680 // tRNA 3'-terminal CCA addition // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006396 // RNA processing // inferred from electronic annotation /// 0006464 // cellular protein modification process // inferred from electronic annotation /// 0008033 // tRNA processing // inferred from electronic annotation /// 0008652 // cellular amino acid biosynthetic process // inferred from electronic annotation /// 0009058 // biosynthetic process // inferred from electronic annotation /// 0009085 // lysine biosynthetic process // inferred from electronic annotation /// 0009089 // lysine biosynthetic process via diaminopimelate // inferred from electronic annotation /// 0019242 // methylglyoxal biosynthetic process // inferred from electronic annotation /// 0019877 // diaminopimelate biosynthetic process // inferred from electronic annotation /// 0042245 // RNA repair // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004077 // biotin-[acetyl-CoA-carboxylase] ligase activity // inferred from electronic annotation /// 0004810 // tRNA adenylyltransferase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008839 // dihydrodipicolinate reductase activity // inferred from electronic annotation /// 0008929 // methylglyoxal synthase activity // inferred from electronic annotation /// 0016437 // tRNA cytidylyltransferase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0016779 // nucleotidyltransferase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0052927 // CTP:tRNA cytidylyltransferase activity // inferred from electronic annotation /// 0052928 // CTP:3'-cytidine-tRNA cytidylyltransferase activity // inferred from electronic annotation /// 0052929 // ATP:3'-cytidine-cytidine-tRNA adenylyltransferase activity // inferred from electronic annotation /// 0070402 // NADPH binding // inferred from electronic annotation"]
["11721707_at",0.11700249,0.053494453,0.060873985,-0.12200546,-0.09176493,-0.05349493,0.1449083,0.0041423324,1.1221085,0.16621213,1.1221085,"up","GPAM",57678.0,"0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006637 // acyl-CoA metabolic process // inferred from electronic annotation /// 0006641 // triglyceride metabolic process // inferred from electronic annotation /// 0006650 // glycerophospholipid metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008654 // phospholipid biosynthetic process // inferred from electronic annotation /// 0009749 // response to glucose stimulus // inferred from electronic annotation /// 0009750 // response to fructose stimulus // inferred from electronic annotation /// 0010867 // positive regulation of triglyceride biosynthetic process // inferred from electronic annotation /// 0014823 // response to activity // inferred from electronic annotation /// 0016024 // CDP-diacylglycerol biosynthetic process // inferred from electronic annotation /// 0019432 // triglyceride biosynthetic process // inferred from direct assay /// 0019432 // triglyceride biosynthetic process // traceable author statement /// 0031667 // response to nutrient levels // inferred from electronic annotation /// 0032869 // cellular response to insulin stimulus // inferred from electronic annotation /// 0040018 // positive regulation of multicellular organism growth // inferred from electronic annotation /// 0042104 // positive regulation of activated T cell proliferation // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044255 // cellular lipid metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046686 // response to cadmium ion // inferred from electronic annotation /// 0050707 // regulation of cytokine secretion // inferred from electronic annotation /// 0051607 // defense response to virus // inferred from electronic annotation /// 0055089 // fatty acid homeostasis // inferred from electronic annotation /// 0055091 // phospholipid homeostasis // inferred from electronic annotation /// 0070236 // negative regulation of activation-induced cell death of T cells // inferred from electronic annotation /// 0070970 // interleukin-2 secretion // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // traceable author statement /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation","0004366 // glycerol-3-phosphate O-acyltransferase activity // inferred from electronic annotation /// 0004366 // glycerol-3-phosphate O-acyltransferase activity // inferred from mutant phenotype /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation","chr10:113909623-113975153 (-) // 91.52 // q25.2"]
["11732475_a_at",0.015607834,-0.015607834,0.042960167,-0.02516079,0.06045866,-0.05214262,0.8597586,0.6269356,1.0139138,0.019934934,1.0139138,"up","C14orf180",400258.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr14:105046020-105056184 (+) // 95.55 // q32.33"]
["11721186_a_at",0.016541004,-0.028870583,0.010373116,-0.010373592,0.0129776,-0.043566227,0.8379635,0.58152753,1.009053,0.013001941,1.009053,"up","RABGGTA",5875.0,"0006464 // cellular protein modification process // traceable author statement /// 0007601 // visual perception // traceable author statement /// 0018342 // protein prenylation // inferred from electronic annotation /// 0018344 // protein geranylgeranylation // inferred from electronic annotation","","0004659 // prenyltransferase activity // inferred from electronic annotation /// 0004663 // Rab geranylgeranyltransferase activity // inferred from electronic annotation /// 0004663 // Rab geranylgeranyltransferase activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008318 // protein prenyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr14:24734743-24740743 (-) // 94.73 // q12"]
["11761351_x_at",0.052567482,0.082461834,0.039173126,-0.19400024,-0.039173126,-0.16522074,0.24799073,0.017893288,1.1414483,0.19086546,1.1414483,"up","SYNGR1",9145.0,"0006605 // protein targeting // inferred from electronic annotation /// 0048169 // regulation of long-term neuronal synaptic plasticity // inferred from sequence or structural similarity /// 0048169 // regulation of long-term neuronal synaptic plasticity // inferred from electronic annotation /// 0048172 // regulation of short-term neuronal synaptic plasticity // inferred from sequence or structural similarity /// 0048172 // regulation of short-term neuronal synaptic plasticity // inferred from electronic annotation","0005887 // integral to plasma membrane // traceable author statement /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030672 // synaptic vesicle membrane // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","","chr22:39745995-39773958 (+) // 94.81 // q13.1"]
["11742028_a_at",-0.012069941,-0.07906175,0.0,0.0,0.38072252,0.20227313,0.48676106,0.11691457,-1.1685417,-0.22470918,1.1685417,"down","ANGPT2",285.0,"0001525 // angiogenesis // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007281 // germ cell development // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0009314 // response to radiation // inferred from electronic annotation /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0009749 // response to glucose stimulus // inferred from electronic annotation /// 0010812 // negative regulation of cell-substrate adhesion // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0014823 // response to activity // inferred from electronic annotation /// 0016525 // negative regulation of angiogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0031100 // organ regeneration // inferred from electronic annotation /// 0043537 // negative regulation of blood vessel endothelial cell migration // inferred from direct assay /// 0045766 // positive regulation of angiogenesis // inferred from electronic annotation /// 0048014 // Tie receptor signaling pathway // inferred from direct assay /// 0048514 // blood vessel morphogenesis // inferred from electronic annotation /// 0050900 // leukocyte migration // traceable author statement /// 0050928 // negative regulation of positive chemotaxis // inferred from direct assay /// 0060135 // maternal process involved in female pregnancy // inferred from electronic annotation /// 0072012 // glomerulus vasculature development // inferred from sequence or structural similarity","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005102 // receptor binding // traceable author statement /// 0005102 // receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0030971 // receptor tyrosine kinase binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:6357176-6420784 (-) // 93.82 // p23.1"]
["11728147_s_at",0.047339678,-0.005364895,0.003726244,-0.003726244,0.075249195,-0.0914588,0.8874984,0.68900144,1.015281,0.021879025,1.015281,"up","AQP11",282679.0,"0001822 // kidney development // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from direct assay /// 0006833 // water transport // inferred from direct assay /// 0015793 // glycerol transport // inferred from direct assay /// 0015840 // urea transport // inferred from direct assay /// 0048388 // endosomal lumen acidification // inferred from electronic annotation /// 0051260 // protein homooligomerization // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation","chr11:77300679-77320913 (+) // 95.14 // q14.1"]
["11719192_a_at",-0.5072408,-0.047015667,0.14980459,0.026370049,0.0034890175,-0.0034890175,0.7993054,0.50210005,-1.1046637,-0.14360726,1.1046637,"down","FBXO9",26268.0,"0016567 // protein ubiquitination // non-traceable author statement","0000151 // ubiquitin ligase complex // non-traceable author statement","0004842 // ubiquitin-protein ligase activity // non-traceable author statement","chr6:52930191-52965839 (+) // 79.17 // p12.1"]
["11760444_x_at",-0.040138245,-0.08015537,-0.11522102,0.081851006,0.0401392,0.06463146,0.15223473,0.004787005,-1.1024492,-0.14071214,1.1024492,"down","HLA-C",3107.0,"0001539 // ciliary or flagellar motility // non-traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // inferred from electronic annotation /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0002480 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-independent // traceable author statement /// 0006955 // immune response // inferred from electronic annotation /// 0006955 // immune response // non-traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0019882 // antigen processing and presentation // inferred from electronic annotation /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0050776 // regulation of immune response // traceable author statement /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060337 // type I interferon-mediated signaling pathway // traceable author statement","0000139 // Golgi membrane // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005858 // axonemal dynein complex // non-traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0012507 // ER to Golgi transport vesicle membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016020 // membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030670 // phagocytic vesicle membrane // traceable author statement /// 0031901 // early endosome membrane // traceable author statement /// 0042612 // MHC class I protein complex // inferred from electronic annotation /// 0071556 // integral to lumenal side of endoplasmic reticulum membrane // traceable author statement","0003777 // microtubule motor activity // non-traceable author statement /// 0032393 // MHC class I receptor activity // non-traceable author statement /// 0032395 // MHC class II receptor activity // non-traceable author statement","chr6:31236577-31239869 (-) // 95.36 // p21.33"]
["11747828_x_at",-0.005086899,-0.015177727,-0.053682327,0.025678635,0.005086899,0.0065193176,0.43277365,0.08431548,-1.026033,-0.037077192,1.026033,"down","AMD1",262.0,"0006557 // S-adenosylmethioninamine biosynthetic process // inferred from electronic annotation /// 0006595 // polyamine metabolic process // traceable author statement /// 0006596 // polyamine biosynthetic process // inferred from electronic annotation /// 0006597 // spermine biosynthetic process // inferred from electronic annotation /// 0006597 // spermine biosynthetic process // non-traceable author statement /// 0008295 // spermidine biosynthetic process // inferred from electronic annotation /// 0008295 // spermidine biosynthetic process // non-traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005829 // cytosol // traceable author statement","0004014 // adenosylmethionine decarboxylase activity // inferred from electronic annotation /// 0004014 // adenosylmethionine decarboxylase activity // traceable author statement /// 0016829 // lyase activity // inferred from electronic annotation /// 0016831 // carboxy-lyase activity // inferred from electronic annotation","chr6:111135798-111214986 (+) // 99.61 // q21"]
["11746462_a_at",-0.0033388138,0.023564339,0.089146614,-0.008862495,-0.07287693,0.0033388138,0.5433164,0.15917572,1.0443395,0.06259084,1.0443395,"up","LMO7",4008.0,"0016567 // protein ubiquitination // non-traceable author statement","0000151 // ubiquitin ligase complex // non-traceable author statement /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // traceable author statement","0004842 // ubiquitin-protein ligase activity // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr13:76334794-76432288 (+) // 99.44 // q22.2"]
["11715424_x_at",4.119873E-4,0.05400753,-0.067362785,0.02810669,-0.056643486,-4.119873E-4,0.9706891,0.9073422,1.0037049,0.0053351717,1.0037049,"up","BCAP31",10134.0,"0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006921 // cellular component disassembly involved in apoptotic process // traceable author statement /// 0006955 // immune response // non-traceable author statement /// 0006955 // immune response // inferred from electronic annotation /// 0007204 // elevation of cytosolic calcium ion concentration // inferred from mutant phenotype /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0032471 // reduction of endoplasmic reticulum calcium ion concentration // inferred from mutant phenotype /// 0035584 // calcium-mediated signaling using intracellular calcium source // inferred from mutant phenotype /// 0043280 // positive regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from mutant phenotype /// 0051561 // elevation of mitochondrial calcium ion concentration // inferred from mutant phenotype /// 2001244 // positive regulation of intrinsic apoptotic signaling pathway // inferred from mutant phenotype","0000139 // Golgi membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005811 // lipid particle // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0033116 // endoplasmic reticulum-Golgi intermediate compartment membrane // inferred from electronic annotation /// 0071556 // integral to lumenal side of endoplasmic reticulum membrane // traceable author statement","0004872 // receptor activity // inferred from electronic annotation /// 0005102 // receptor binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chrX:152965951-152989802 (-) // 56.42 // q28"]
["11742564_s_at",-0.19946337,0.044781923,-0.09895897,-0.044781685,0.21372366,0.13970709,0.5284758,0.14748536,-1.1387333,-0.18742986,1.1387333,"down","LOC727924 /// OR4N4","283694 /// 727924","0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr15:22382472-22383423 (+) // 99.47 // q11.2"]
["11744293_a_at",-0.03710413,0.14571524,-0.085466385,-0.024688244,0.024688244,0.16533566,0.8599457,0.6282726,-1.0333987,-0.04739704,1.0333987,"down","CYTH1",9267.0,"0016192 // vesicle-mediated transport // not recorded /// 0016192 // vesicle-mediated transport // traceable author statement /// 0030155 // regulation of cell adhesion // inferred from direct assay /// 0032012 // regulation of ARF protein signal transduction // inferred from electronic annotation /// 0090162 // establishment of epithelial cell polarity // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005802 // trans-Golgi network // not recorded /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005923 // tight junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005086 // ARF guanyl-nucleotide exchange factor activity // not recorded /// 0005086 // ARF guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005086 // ARF guanyl-nucleotide exchange factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation","chr17:76670129-76778398 (-) // 98.52 // q25.3"]
["11742642_x_at",-0.011808634,-0.060693502,0.011808634,-0.028833628,0.03457737,0.015529394,0.7332589,0.39106277,-1.0191188,-0.027322218,1.0191188,"down","","","","","","chr9:69425667-69448861 (+) // 96.29 // q21.11 /// chr9:42411968-42435225 (+) // 95.52 // p12 /// chr9:43066676-43089866 (-) // 95.39 // p12 /// chr9:44050737-44074818 (-) // 94.88 // p11.2"]
["11722210_a_at",0.14676476,0.010812759,-0.010813236,-0.11487484,-0.11919165,0.054081917,0.6083277,0.22216815,1.0784179,0.10891634,1.0784179,"up","PTGS1",5742.0,"0001516 // prostaglandin biosynthetic process // inferred from sequence or structural similarity /// 0001516 // prostaglandin biosynthetic process // inferred from electronic annotation /// 0006629 // lipid metabolic process // non-traceable author statement /// 0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0006692 // prostanoid metabolic process // traceable author statement /// 0006693 // prostaglandin metabolic process // inferred from electronic annotation /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0008217 // regulation of blood pressure // inferred from sequence or structural similarity /// 0008217 // regulation of blood pressure // inferred from electronic annotation /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0010243 // response to organic nitrogen // inferred from electronic annotation /// 0010700 // negative regulation of norepinephrine secretion // inferred from electronic annotation /// 0019371 // cyclooxygenase pathway // inferred from direct assay /// 0032811 // negative regulation of epinephrine secretion // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0045907 // positive regulation of vasoconstriction // inferred from electronic annotation /// 0045987 // positive regulation of smooth muscle contraction // inferred from electronic annotation /// 0051412 // response to corticosterone stimulus // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0001750 // photoreceptor outer segment // inferred from electronic annotation /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from sequence or structural similarity /// 0005792 // microsome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0044444 // cytoplasmic part // inferred from direct assay /// 0044444 // cytoplasmic part // inferred from electronic annotation","0004601 // peroxidase activity // inferred from electronic annotation /// 0004666 // prostaglandin-endoperoxide synthase activity // inferred from direct assay /// 0004666 // prostaglandin-endoperoxide synthase activity // inferred from electronic annotation /// 0004666 // prostaglandin-endoperoxide synthase activity // traceable author statement /// 0008289 // lipid binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016702 // oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen // inferred from electronic annotation /// 0020037 // heme binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:125133228-125157982 (+) // 78.08 // q33.2"]
["11732330_s_at",0.04003334,0.0027942657,0.034053802,-0.026706696,-0.058796883,-0.0027942657,0.36165383,0.050589178,1.0389022,0.055059798,1.0389022,"up","MAP7D1",55700.0,"","0005737 // cytoplasm // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation","","chr1:36621801-36646448 (+) // 93.77 // p34.3"]
["11759145_s_at",-0.18447208,0.025676727,0.1650877,-0.025676727,0.09955263,-0.22519302,0.9021109,0.7242727,1.0370867,0.052536543,1.0370867,"up","IL1RL1",9173.0,"0002826 // negative regulation of T-helper 1 type immune response // inferred from electronic annotation /// 0006955 // immune response // non-traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0032689 // negative regulation of interferon-gamma production // inferred from electronic annotation /// 0032754 // positive regulation of interleukin-5 production // inferred from electronic annotation /// 0038172 // interleukin-33-mediated signaling pathway // inferred from electronic annotation /// 0043032 // positive regulation of macrophage activation // inferred from electronic annotation /// 0043124 // negative regulation of I-kappaB kinase/NF-kappaB cascade // inferred from electronic annotation /// 0045087 // innate immune response // inferred from electronic annotation /// 0050729 // positive regulation of inflammatory response // inferred from electronic annotation /// 0090197 // positive regulation of chemokine secretion // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031224 // intrinsic to membrane // inferred from electronic annotation","0002113 // interleukin-33 binding // inferred from electronic annotation /// 0002114 // interleukin-33 receptor activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0004896 // cytokine receptor activity // traceable author statement /// 0004908 // interleukin-1 receptor activity // inferred from electronic annotation /// 0005057 // receptor signaling protein activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr2:102953607-102962560 (+) // 78.09 // q12.1"]
["11735436_at",-0.06137252,0.076114416,-0.028266191,0.028266191,0.034902573,-0.04659748,0.9499025,0.84772,-1.0069778,-0.010031872,1.0069778,"down","FHAD1",114827.0,"","","","chr1:15573729-15724623 (+) // 92.01 // p36.21"]
["11752134_a_at",-0.11544275,0.0042290688,-0.0042290688,0.029202938,0.20059681,-0.026525497,0.62935835,0.24720025,-1.0764184,-0.106238954,1.0764184,"down","MED12L",116931.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0016592 // mediator complex // inferred from electronic annotation","0001104 // RNA polymerase II transcription cofactor activity // inferred from electronic annotation /// 0008013 // beta-catenin binding // inferred from electronic annotation","chr3:150804180-150911532 (+) // 100.0 // q25.1"]
["11740377_a_at",-0.0046191216,-0.028163433,0.0046191216,-0.06092596,0.012590885,0.017188549,0.99211407,0.972512,1.0006895,9.944049E-4,1.0006895,"up","PXMP4",11264.0,"","0005777 // peroxisome // inferred from direct assay /// 0005777 // peroxisome // inferred from electronic annotation /// 0005778 // peroxisomal membrane // inferred from direct assay /// 0005778 // peroxisomal membrane // inferred from sequence or structural similarity /// 0005778 // peroxisomal membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr20:32290550-32308236 (-) // 40.62 // q11.22"]
["11731990_a_at",-0.20039368,-0.07893634,-0.069625616,0.23972607,0.11616111,0.069625616,0.24493292,0.017335469,-1.1959492,-0.2581561,1.1959492,"down","CYP3A43",64816.0,"0006805 // xenobiotic metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0004497 // monooxygenase activity // inferred from electronic annotation /// 0004497 // monooxygenase activity // inferred from sequence or structural similarity /// 0005506 // iron ion binding // inferred from electronic annotation /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016705 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen // inferred from electronic annotation /// 0016712 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen // inferred from electronic annotation /// 0020037 // heme binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070330 // aromatase activity // inferred from electronic annotation","chr7:99425635-99464178 (+) // 100.0 // q22.1"]
["11716772_at",-0.007027149,-0.09042692,-0.17493582,0.0070266724,0.043869495,0.013698578,0.43653503,0.087012365,-1.0809712,-0.11232814,1.0809712,"down","C11orf68",83638.0,"","","","chr11:65684280-65686588 (-) // 93.53 // q13.1"]
["11715728_a_at",-0.08936405,-0.11559868,-0.04993248,0.07170105,0.04993248,0.1250124,0.15152523,0.004694793,-1.1228619,-0.16718045,1.1228619,"down","ITGB1",3688.0,"0000082 // G1/S transition of mitotic cell cycle // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001708 // cell fate specification // inferred from electronic annotation /// 0001894 // tissue homeostasis // inferred from electronic annotation /// 0002042 // cell migration involved in sprouting angiogenesis // inferred from electronic annotation /// 0006874 // cellular calcium ion homeostasis // inferred from electronic annotation /// 0006968 // cellular defense response // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // traceable author statement /// 0007159 // leukocyte cell-cell adhesion // inferred from direct assay /// 0007160 // cell-matrix adhesion // inferred from electronic annotation /// 0007160 // cell-matrix adhesion // inferred from mutant phenotype /// 0007161 // calcium-independent cell-matrix adhesion // inferred from genetic interaction /// 0007229 // integrin-mediated signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008277 // regulation of G-protein coupled receptor protein signaling pathway // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0008354 // germ cell migration // inferred from electronic annotation /// 0010811 // positive regulation of cell-substrate adhesion // inferred from electronic annotation /// 0010976 // positive regulation of neuron projection development // inferred from electronic annotation /// 0014823 // response to activity // inferred from electronic annotation /// 0016477 // cell migration // traceable author statement /// 0030183 // B cell differentiation // inferred by curator /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from electronic annotation /// 0031345 // negative regulation of cell projection organization // inferred from electronic annotation /// 0031667 // response to nutrient levels // inferred from electronic annotation /// 0032594 // protein transport within lipid bilayer // inferred from electronic annotation /// 0033631 // cell-cell adhesion mediated by integrin // inferred from expression pattern /// 0034329 // cell junction assembly // traceable author statement /// 0034698 // response to gonadotropin stimulus // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from genetic interaction /// 0043410 // positive regulation of MAPK cascade // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045214 // sarcomere organization // inferred from electronic annotation /// 0045596 // negative regulation of cell differentiation // inferred from electronic annotation /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from electronic annotation /// 0045807 // positive regulation of endocytosis // inferred from electronic annotation /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0050776 // regulation of immune response // traceable author statement /// 0050900 // leukocyte migration // traceable author statement /// 0051726 // regulation of cell cycle // inferred from electronic annotation /// 0055007 // cardiac muscle cell differentiation // inferred from electronic annotation /// 0060135 // maternal process involved in female pregnancy // inferred from electronic annotation /// 0070830 // tight junction assembly // inferred from electronic annotation /// 0071260 // cellular response to mechanical stimulus // inferred from electronic annotation /// 0071305 // cellular response to vitamin D // inferred from electronic annotation /// 0071479 // cellular response to ionizing radiation // inferred from electronic annotation /// 0071559 // response to transforming growth factor beta stimulus // inferred from electronic annotation","0001669 // acrosomal vesicle // inferred from electronic annotation /// 0001726 // ruffle // traceable author statement /// 0005604 // basement membrane // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from electronic annotation /// 0005912 // adherens junction // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0005925 // focal adhesion // inferred from electronic annotation /// 0008305 // integrin complex // non-traceable author statement /// 0008305 // integrin complex // inferred from electronic annotation /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0009986 // cell surface // inferred from electronic annotation /// 0014704 // intercalated disc // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0030056 // hemidesmosome // inferred from electronic annotation /// 0031594 // neuromuscular junction // inferred from direct assay /// 0031594 // neuromuscular junction // inferred from electronic annotation /// 0032154 // cleavage furrow // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from direct assay /// 0034667 // alpha3-beta1 integrin complex // inferred from electronic annotation /// 0034678 // alpha8-beta1 integrin complex // traceable author statement /// 0034679 // alpha9-beta1 integrin complex // inferred from electronic annotation /// 0035748 // myelin sheath abaxonal region // inferred from electronic annotation /// 0042383 // sarcolemma // inferred from direct assay /// 0042383 // sarcolemma // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0045121 // membrane raft // inferred from electronic annotation","0001948 // glycoprotein binding // inferred from electronic annotation /// 0001968 // fibronectin binding // inferred from electronic annotation /// 0002020 // protease binding // inferred from electronic annotation /// 0003779 // actin binding // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from electronic annotation /// 0005178 // integrin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005518 // collagen binding // inferred from electronic annotation /// 0019900 // kinase binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0042277 // peptide binding // inferred from electronic annotation /// 0043236 // laminin binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // non-traceable author statement /// 0051393 // alpha-actinin binding // inferred from electronic annotation","chr10:33189246-33225116 (-) // 85.61 // p11.22"]
["11744671_x_at",-0.0054330826,0.016007423,0.12385082,-0.0116586685,-0.017939568,0.0054330826,0.6414849,0.26289257,1.0373217,0.05286336,1.0373217,"up","CTBP2",1488.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0019079 // viral genome replication // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0050872 // white fat cell differentiation // inferred from sequence or structural similarity /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0017053 // transcriptional repressor complex // inferred from sequence or structural similarity /// 0030054 // cell junction // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016616 // oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0048037 // cofactor binding // inferred from electronic annotation /// 0051287 // NAD binding // inferred from electronic annotation","chr10:126677704-126694696 (-) // 98.9 // q26.13"]
["11717010_a_at",-0.033815384,-0.03950596,-0.04495716,0.115558624,0.04259777,0.033815384,0.24106751,0.016660552,-1.0743147,-0.10341668,1.0743147,"down","MCFD2",90411.0,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0019752 // carboxylic acid metabolic process // inferred from electronic annotation /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0012507 // ER to Golgi transport vesicle membrane // traceable author statement","0005509 // calcium ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:47129012-47136317 (-) // 42.22 // p21"]
["11738960_x_at",-0.11670709,0.010713816,-0.047915936,0.023173809,0.044267654,-0.010713816,0.53833723,0.15527363,-1.0498712,-0.07021236,1.0498712,"down","CARD17",440068.0,"0006508 // proteolysis // inferred from electronic annotation /// 0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0004197 // cysteine-type endopeptidase activity // inferred from electronic annotation /// 0004869 // cysteine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation","chr11:104963195-104971507 (-) // 95.06 // q22.3"]
["11732944_a_at",-0.034164906,0.045541763,-0.11131048,-0.017548561,0.017548561,0.04291725,0.7274455,0.38228625,-1.0335563,-0.047617037,1.0335563,"down","CCDC48",79825.0,"","","","chr3:128720149-128759583 (+) // 89.27 // q21.3"]
["11740789_at",0.020197392,-0.11587429,0.10028124,0.05490589,-0.020197392,-0.059250355,0.96667874,0.89838654,1.0067569,0.009715362,1.0067569,"up","CDH12",1010.0,"0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // non-traceable author statement /// 0007156 // homophilic cell adhesion // inferred from electronic annotation /// 0016337 // cell-cell adhesion // non-traceable author statement /// 0034329 // cell junction assembly // traceable author statement /// 0034332 // adherens junction organization // traceable author statement /// 0045216 // cell-cell junction organization // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr5:21750974-22853731 (-) // 97.51 // p14.3"]
["11742583_at",-0.11677265,0.043165207,0.13968706,-0.11647248,0.22280908,-0.043165445,0.99812955,0.9942902,1.0006722,9.6948433E-4,1.0006722,"up","OR10G3",26533.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr14:22037933-22038875 (-) // 100.0 // q11.2"]
["11723922_a_at",0.020456314,0.09805298,-0.025592804,-0.018523693,-0.11236048,0.01852417,0.64461607,0.2669555,1.0485717,0.06842552,1.0485717,"up","IPO13",9670.0,"0006606 // protein import into nucleus // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008565 // protein transporter activity // inferred from electronic annotation","chr1:44412477-44433693 (+) // 98.72 // p34.1"]
["11738470_at",-0.15743017,-0.068268776,0.010907173,0.0498724,0.011820316,-0.010907173,0.5460203,0.16235077,-1.0632831,-0.08852575,1.0632831,"down","KRT84",3890.0,"0001942 // hair follicle development // non-traceable author statement /// 0035878 // nail development // non-traceable author statement /// 0045616 // regulation of keratinocyte differentiation // inferred from electronic annotation","0005882 // intermediate filament // inferred from electronic annotation /// 0045095 // keratin filament // inferred from direct assay /// 0045095 // keratin filament // inferred from electronic annotation /// 0045111 // intermediate filament cytoskeleton // inferred from electronic annotation","0005198 // structural molecule activity // inferred from electronic annotation /// 0005200 // structural constituent of cytoskeleton // non-traceable author statement /// 0030280 // structural constituent of epidermis // non-traceable author statement /// 0030280 // structural constituent of epidermis // inferred from electronic annotation","chr12:52771595-52779436 (-) // 100.0 // q13.13"]
["11757246_at",0.040020227,0.040020227,-0.10835743,-0.040020227,0.08052206,-0.053914785,0.9830181,0.9430367,-1.0034494,-0.0049679265,1.0034494,"down","MT1IP",644314.0,"","","0046872 // metal ion binding // inferred from electronic annotation","chr16:56709648-56711653 (+) // 76.21 // q13"]
["11749613_a_at",-0.0010490417,-0.081059456,0.06092167,0.0010490417,-0.0023021698,0.0068445206,0.9471653,0.83901644,-1.0062063,-0.008926091,1.0062063,"down","OCIAD1",54940.0,"","0005739 // mitochondrion // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr4:48833075-48854521 (+) // 72.28 // p11"]
["11726810_s_at",-0.04385996,-0.06030655,0.05747223,-0.09965658,0.04385996,0.107515335,0.8790971,0.6701325,-1.0229987,-0.0328043,1.0229987,"down","C19orf77",284422.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr19:3474409-3480540 (-) // 87.8 // p13.3"]
["11741169_at",-0.009832859,0.009832859,-0.3588128,0.06376696,0.105409145,-0.023998737,0.6327441,0.25223938,-1.1234974,-0.16799673,1.1234974,"down","MC2R",4158.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007187 // G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger // traceable author statement /// 0030819 // positive regulation of cAMP biosynthetic process // inferred from direct assay","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004977 // melanocortin receptor activity // traceable author statement /// 0004977 // melanocortin receptor activity // inferred from electronic annotation /// 0004978 // corticotropin receptor activity // inferred from electronic annotation /// 0004978 // corticotropin receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr18:13882042-13915706 (-) // 94.64 // p11.21"]
["11748156_a_at",-0.025671005,-0.026790619,0.039133072,-0.045186996,0.025671005,0.082407,0.84001017,0.58522433,-1.0177665,-0.025406577,1.0177665,"down","TIA1",7072.0,"0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // traceable author statement /// 0017148 // negative regulation of translation // inferred from electronic annotation /// 0042036 // negative regulation of cytokine biosynthetic process // inferred from electronic annotation /// 0048024 // regulation of nuclear mRNA splicing, via spliceosome // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008143 // poly(A) RNA binding // traceable author statement /// 0017091 // AU-rich element binding // inferred from electronic annotation","chr2:70456091-70475789 (-) // 99.88 // p13.3"]
["11720895_at",0.0053958893,0.051143646,0.09017658,-0.0053958893,-0.13699341,-0.025053978,0.44680822,0.09336408,1.0752856,0.10471983,1.0752856,"up","SOS1",6654.0,"0006915 // apoptotic process // traceable author statement /// 0007165 // signal transduction // non-traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007265 // Ras protein signal transduction // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0032321 // positive regulation of Rho GTPase activity // traceable author statement /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0050900 // leukocyte migration // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement","0003677 // DNA binding // inferred from electronic annotation /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005088 // Ras guanyl-nucleotide exchange factor activity // not recorded /// 0005088 // Ras guanyl-nucleotide exchange factor activity // traceable author statement /// 0005088 // Ras guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // traceable author statement /// 0005100 // Rho GTPase activator activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation","chr2:39208540-39347604 (-) // 99.33 // p22.1"]
["11745008_a_at",-0.012956619,0.012956619,-0.024276257,-0.071107864,0.14357615,0.14307117,0.6937195,0.33102974,-1.056973,-0.07993849,1.056973,"down","KATNB1",10300.0,"0006605 // protein targeting // non-traceable author statement /// 0007026 // negative regulation of microtubule depolymerization // inferred from mutant phenotype /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0010942 // positive regulation of cell death // inferred from electronic annotation /// 0010976 // positive regulation of neuron projection development // inferred from electronic annotation /// 0031117 // positive regulation of microtubule depolymerization // inferred from mutant phenotype /// 0051013 // microtubule severing // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0000922 // spindle pole // inferred from direct assay /// 0000922 // spindle pole // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0008352 // katanin complex // inferred from direct assay /// 0008352 // katanin complex // traceable author statement /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0030424 // axon // inferred from electronic annotation /// 0030426 // growth cone // inferred from electronic annotation /// 0030496 // midbody // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation","0008017 // microtubule binding // non-traceable author statement /// 0008568 // microtubule-severing ATPase activity // inferred from direct assay /// 0045502 // dynein binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from physical interaction","chr16:57771113-57791156 (+) // 97.75 // q21"]
["11744775_x_at",-0.008831978,-0.024260521,0.051636696,0.013044357,0.008831978,-0.020074844,0.94617194,0.83679277,1.0038759,0.0055808634,1.0038759,"up","BZW1",9689.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016070 // RNA metabolic process // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay","","chr2:201676271-201688742 (+) // 98.12 // q33.1"]
["11759392_at",0.059517384,-0.10390234,-0.1676693,0.066905975,0.2011857,-0.059517384,0.621625,0.23817775,-1.1020652,-0.14020959,1.1020652,"down","KRTAP21-2",337978.0,"","0005882 // intermediate filament // inferred from electronic annotation","","chr21:32119111-32119551 (-) // 64.17 // q22.11"]
["11726816_at",0.050715446,0.006128788,0.04097557,-0.38795376,-0.0462265,-0.006128788,0.60262305,0.21512404,1.1323942,0.17937626,1.1323942,"up","GPRIN1",114787.0,"0031175 // neuron projection development // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030426 // growth cone // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0051219 // phosphoprotein binding // inferred from electronic annotation","chr5:176022804-176037147 (-) // 94.4 // q35.2"]
["11756223_s_at",0.0018959045,0.004869461,0.007593155,-0.048505783,-0.0018959045,-0.061385155,0.42824206,0.0813672,1.0295746,0.042048413,1.0295746,"up","DDX21",9188.0,"","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005730 // nucleolus // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0004004 // ATP-dependent RNA helicase activity // traceable author statement /// 0004386 // helicase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr10:70742786-70744043 (+) // 94.27 // q22.1"]
["11740724_a_at",-0.084929466,-0.11697292,0.23272681,-0.25244212,0.1119709,0.08492923,0.95687973,0.8674743,1.0201553,0.028788807,1.0201553,"up","MOGAT3",346606.0,"0006071 // glycerol metabolic process // inferred from electronic annotation /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0019432 // triglyceride biosynthetic process // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003846 // 2-acylglycerol O-acyltransferase activity // inferred from electronic annotation /// 0004144 // diacylglycerol O-acyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0016747 // transferase activity, transferring acyl groups other than amino-acyl groups // inferred from electronic annotation","chr7:100838840-100844303 (-) // 81.17 // q22.1"]
["11760956_x_at",-0.11516285,0.031183243,0.24545765,-0.031183243,0.0443573,-0.0647459,0.8252704,0.5522334,1.0504566,0.07101662,1.0504566,"up","GGNBP2",79893.0,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","","chr17:34900767-34938524 (+) // 72.13 // q12"]
["11757496_s_at",-0.13158941,5.9080124E-4,-0.08329725,-5.9080124E-4,0.05306101,0.053429127,0.39907488,0.06630378,-1.0767862,-0.10673177,1.0767862,"down","RAPGEFL1",51195.0,"0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005624 // membrane fraction // traceable author statement","0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005085 // guanyl-nucleotide exchange factor activity // traceable author statement","chr17:38351402-38351900 (+) // 98.61 // q21.1"]
["11724328_a_at",0.05771637,0.033135414,0.056344986,-0.03617096,-0.033135414,-0.040337563,0.077496395,4.8537465E-4,1.061139,0.08561363,1.061139,"up","UBE2C",11065.0,"0000075 // cell cycle checkpoint // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0007049 // cell cycle // non-traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007051 // spindle organization // non-traceable author statement /// 0007067 // mitosis // inferred from electronic annotation /// 0007094 // mitotic cell cycle spindle assembly checkpoint // traceable author statement /// 0008054 // cyclin catabolic process // inferred from direct assay /// 0010458 // exit from mitosis // inferred from mutant phenotype /// 0010994 // free ubiquitin chain polymerization // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0031536 // positive regulation of exit from mitosis // inferred from mutant phenotype /// 0048015 // phosphatidylinositol-mediated signaling // non-traceable author statement /// 0051301 // cell division // inferred from electronic annotation /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051488 // activation of anaphase-promoting complex activity // traceable author statement /// 0070936 // protein K48-linked ubiquitination // inferred from direct assay /// 0070979 // protein K11-linked ubiquitination // inferred from direct assay","0005654 // nucleoplasm // traceable author statement /// 0005680 // anaphase-promoting complex // inferred from direct assay /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation","chr20:44441289-44445594 (+) // 91.52 // q13.12"]
["11717175_a_at",0.07024193,0.13366127,-0.0015354156,-0.010220051,-0.1520729,0.0015354156,0.5003026,0.12681797,1.0875199,0.121041775,1.0875199,"up","ABL1",25.0,"0000115 // regulation of transcription involved in S phase of mitotic cell cycle // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006298 // mismatch repair // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006464 // cellular protein modification process // non-traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006897 // endocytosis // inferred from electronic annotation /// 0006914 // autophagy // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0006975 // DNA damage induced protein phosphorylation // inferred from direct assay /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008630 // DNA damage response, signal transduction resulting in induction of apoptosis // traceable author statement /// 0010506 // regulation of autophagy // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from sequence or structural similarity /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030100 // regulation of endocytosis // traceable author statement /// 0030155 // regulation of cell adhesion // traceable author statement /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0042692 // muscle cell differentiation // traceable author statement /// 0042770 // signal transduction in response to DNA damage // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0051149 // positive regulation of muscle cell differentiation // traceable author statement /// 0051353 // positive regulation of oxidoreductase activity // inferred from direct assay /// 0051726 // regulation of cell cycle // inferred from electronic annotation /// 0071901 // negative regulation of protein serine/threonine kinase activity // inferred from direct assay /// 2000145 // regulation of cell motility // traceable author statement /// 2000249 // regulation of actin cytoskeleton reorganization // traceable author statement /// 2001020 // regulation of response to DNA damage stimulus // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from direct assay /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003785 // actin monomer binding // traceable author statement /// 0004515 // nicotinate-nucleotide adenylyltransferase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // traceable author statement /// 0004715 // non-membrane spanning protein tyrosine kinase activity // inferred from direct assay /// 0004715 // non-membrane spanning protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0030145 // manganese ion binding // inferred from direct assay /// 0030145 // manganese ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051019 // mitogen-activated protein kinase binding // inferred from physical interaction /// 0070064 // proline-rich region binding // inferred from physical interaction","chr9:133588219-133763060 (+) // 99.67 // q34.12"]
["11725787_a_at",-0.05959463,-0.08190441,0.23998308,0.03719759,0.1789589,-0.037197113,0.94589955,0.8362211,-1.0187677,-0.026825145,1.0187677,"down","TMA16",55319.0,"","","","chr4:164415612-164441691 (+) // 94.2 // q32.2"]
["11716230_s_at",-0.025443554,0.03309822,0.025443554,-0.05550623,-0.054131985,0.03761053,0.72871244,0.38397002,1.0245867,0.035042036,1.0245867,"up","TMEM167B",56900.0,"","0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr1:109632424-109639556 (+) // 86.76 // p13.3"]
["11750249_a_at",-0.11315775,-0.101408005,0.15500641,0.4601078,-0.07300639,0.07300639,0.7351281,0.39400816,-1.1275742,-0.17322238,1.1275742,"down","FAM221B",392307.0,"","","","chr9:35817014-35828729 (-) // 71.26 // p13.3"]
["11747771_a_at",-0.2062962,-0.037023783,0.19193053,0.03079772,-0.011250496,0.011250496,0.9422414,0.8249385,-1.0191708,-0.027395794,1.0191708,"down","DGKB",1607.0,"0007205 // protein kinase C-activating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0035556 // intracellular signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004143 // diacylglycerol kinase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:14188216-14942533 (-) // 97.87 // p21.2"]
["11718042_at",-0.05420351,-0.015607357,-0.06898737,0.062078,0.015607357,0.061790943,0.22452258,0.013882001,-1.066407,-0.092758104,1.066407,"down","MED17",9440.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // inferred from direct assay /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0030518 // intracellular steroid hormone receptor signaling pathway // inferred from direct assay /// 0030521 // androgen receptor signaling pathway // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from direct assay /// 0016592 // mediator complex // inferred from direct assay /// 0016592 // mediator complex // inferred from electronic annotation","0001104 // RNA polymerase II transcription cofactor activity // inferred from direct assay /// 0001104 // RNA polymerase II transcription cofactor activity // inferred from electronic annotation /// 0003712 // transcription cofactor activity // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0003713 // transcription coactivator activity // traceable author statement /// 0004872 // receptor activity // inferred from direct assay /// 0030374 // ligand-dependent nuclear receptor transcription coactivator activity // non-traceable author statement /// 0042809 // vitamin D receptor binding // non-traceable author statement /// 0046966 // thyroid hormone receptor binding // inferred from direct assay","chr11:93517392-93546597 (+) // 91.76 // q21"]
["11751646_a_at",0.025785446,-0.065888405,-0.031733513,0.016386032,-0.007710457,0.007710457,0.7060605,0.3476485,-1.0205929,-0.02940755,1.0205929,"down","MAT2B",27430.0,"0000096 // sulfur amino acid metabolic process // traceable author statement /// 0006556 // S-adenosylmethionine biosynthetic process // inferred from direct assay /// 0006556 // S-adenosylmethionine biosynthetic process // inferred from electronic annotation /// 0006730 // one-carbon metabolic process // inferred from electronic annotation /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0032259 // methylation // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044237 // cellular metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0045226 // extracellular polysaccharide biosynthetic process // inferred from electronic annotation","0005622 // intracellular // inferred by curator /// 0005634 // nucleus // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0048269 // methionine adenosyltransferase complex // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008831 // dTDP-4-dehydrorhamnose reductase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0048270 // methionine adenosyltransferase regulator activity // inferred from direct assay /// 0050662 // coenzyme binding // inferred from electronic annotation","chr5:162932953-162945555 (+) // 99.7 // q34"]
["11758844_at",-0.050561905,0.043971777,-0.0859983,-0.005976677,0.16852856,0.005976677,0.6483429,0.2718628,-1.0621879,-0.087039016,1.0621879,"down","RAB4A /// SPHAR","10638 /// 5867","0006184 // GTP catabolic process // inferred from direct assay /// 0006184 // GTP catabolic process // traceable author statement /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006260 // DNA replication // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0030100 // regulation of endocytosis // inferred from electronic annotation /// 0032781 // positive regulation of ATPase activity // inferred from electronic annotation","0005625 // soluble fraction // inferred from electronic annotation /// 0005626 // insoluble fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0032593 // insulin-responsive compartment // inferred from electronic annotation /// 0055037 // recycling endosome // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0001671 // ATPase activator activity // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from direct assay /// 0003924 // GTPase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from direct assay /// 0005525 // GTP binding // inferred from electronic annotation /// 0008565 // protein transporter activity // inferred from electronic annotation /// 0019003 // GDP binding // inferred from direct assay /// 0019905 // syntaxin binding // inferred from electronic annotation /// 0035255 // ionotropic glutamate receptor binding // inferred from electronic annotation /// 0051117 // ATPase binding // inferred from electronic annotation","chr1:229406808-229441638 (+) // 98.86 // q42.13"]
["11722896_a_at",0.10912132,-0.04367733,-0.02915144,-0.071012974,0.02915144,0.034778595,0.94039696,0.8202462,1.0100722,0.014458465,1.0100722,"up","PIK3C2A",5286.0,"0006661 // phosphatidylinositol biosynthetic process // traceable author statement /// 0006887 // exocytosis // traceable author statement /// 0006887 // exocytosis // inferred from electronic annotation /// 0006897 // endocytosis // inferred from mutant phenotype /// 0006897 // endocytosis // inferred from electronic annotation /// 0007154 // cell communication // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0014829 // vascular smooth muscle contraction // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0036092 // phosphatidylinositol-3-phosphate biosynthetic process // traceable author statement /// 0036092 // phosphatidylinositol-3-phosphate biosynthetic process // inferred from electronic annotation /// 0046854 // phosphatidylinositol phosphorylation // traceable author statement /// 0046854 // phosphatidylinositol phosphorylation // inferred from electronic annotation /// 0048008 // platelet-derived growth factor receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // inferred from electronic annotation /// 0048268 // clathrin coat assembly // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030136 // clathrin-coated vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031982 // vesicle // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016303 // 1-phosphatidylinositol-3-kinase activity // inferred from electronic annotation /// 0016303 // 1-phosphatidylinositol-3-kinase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0016773 // phosphotransferase activity, alcohol group as acceptor // inferred from electronic annotation /// 0035004 // phosphatidylinositol 3-kinase activity // traceable author statement /// 0035005 // 1-phosphatidylinositol-4-phosphate 3-kinase activity // inferred from electronic annotation /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation","chr11:17108118-17229543 (-) // 95.37 // p15.1"]
["11747456_a_at",0.08874178,0.0019769669,-0.1082468,-0.123812675,0.1174984,-0.0019769669,0.99262154,0.97435117,-1.0021365,-0.003078985,1.0021365,"down","GPT",2875.0,"0006094 // gluconeogenesis // non-traceable author statement /// 0006807 // nitrogen compound metabolic process // non-traceable author statement /// 0008652 // cellular amino acid biosynthetic process // traceable author statement /// 0009058 // biosynthetic process // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042853 // L-alanine catabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement","0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0003824 // catalytic activity // inferred from electronic annotation /// 0004021 // L-alanine:2-oxoglutarate aminotransferase activity // not recorded /// 0004021 // L-alanine:2-oxoglutarate aminotransferase activity // non-traceable author statement /// 0004021 // L-alanine:2-oxoglutarate aminotransferase activity // inferred from electronic annotation /// 0008483 // transaminase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016847 // 1-aminocyclopropane-1-carboxylate synthase activity // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation","chr8:145729508-145731788 (+) // 99.33 // q24.3"]
["11754187_s_at",-0.022149086,0.008146286,0.0593853,-0.008146286,0.047756195,-0.05193329,0.8629982,0.6341037,1.0134221,0.01923524,1.0134221,"up","EIF2AK1",27102.0,"0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006418 // tRNA aminoacylation for protein translation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006950 // response to stress // inferred from expression pattern /// 0006950 // response to stress // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0009605 // response to external stimulus // inferred from expression pattern /// 0010467 // gene expression // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0017148 // negative regulation of translation // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0031398 // positive regulation of protein ubiquitination // inferred from electronic annotation /// 0045993 // negative regulation of translational initiation by iron // non-traceable author statement /// 0046777 // protein autophosphorylation // inferred from sequence or structural similarity /// 0046777 // protein autophosphorylation // inferred from electronic annotation /// 0046986 // negative regulation of hemoglobin biosynthetic process // inferred from sequence or structural similarity /// 0046986 // negative regulation of hemoglobin biosynthetic process // inferred from electronic annotation /// 0060510 // Type II pneumocyte differentiation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004694 // eukaryotic translation initiation factor 2alpha kinase activity // inferred from direct assay /// 0004694 // eukaryotic translation initiation factor 2alpha kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0020037 // heme binding // inferred from sequence or structural similarity /// 0020037 // heme binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from sequence or structural similarity /// 0042803 // protein homodimerization activity // inferred from electronic annotation","chr7:6063403-6098809 (-) // 95.77 // p22.1"]
["11721459_a_at",-0.07688475,-2.1409988E-4,-0.01570034,2.1362305E-4,0.0054159164,0.03553915,0.5433703,0.1593619,-1.0314372,-0.044655927,1.0314372,"down","TAPBPL",55080.0,"0019885 // antigen processing and presentation of endogenous peptide antigen via MHC class I // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr12:6560837-6571468 (+) // 98.12 // p13.31"]
["11724701_x_at",0.04778266,0.017259836,-0.050311804,-0.017259836,-0.085918665,0.020582676,0.79226273,0.48839763,1.0227419,0.03244213,1.0227419,"up","AS3MT /// C10orf32-AS3MT","100528007 /// 57412","0009404 // toxin metabolic process // inferred from sequence or structural similarity /// 0009404 // toxin metabolic process // inferred from electronic annotation /// 0018872 // arsonoacetate metabolic process // inferred from sequence or structural similarity /// 0018872 // arsonoacetate metabolic process // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation /// 0046685 // response to arsenic-containing substance // inferred from electronic annotation","0005625 // soluble fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // inferred from electronic annotation","0008168 // methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0030791 // arsenite methyltransferase activity // inferred from sequence or structural similarity /// 0030791 // arsenite methyltransferase activity // inferred from electronic annotation /// 0030792 // methylarsonite methyltransferase activity // inferred from sequence or structural similarity /// 0030792 // methylarsonite methyltransferase activity // inferred from electronic annotation","chr10:104629226-104661652 (+) // 74.44 // q24.32"]
["11730108_a_at",0.008852959,-0.008852959,0.038649082,-0.08485651,0.049702168,-0.066553116,0.7077823,0.351024,1.0329608,0.046785466,1.0329608,"up","ZNF793",390927.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:37997819-38034235 (+) // 49.82 // q13.12"]
["11723275_at",-0.005027294,0.005027294,-0.08143473,0.20815778,0.23653555,-0.1002717,0.64771885,0.2710302,-1.1033971,-0.14195213,1.1033971,"down","LOC644172 /// MAPK8IP1","644172 /// 9479","0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006469 // negative regulation of protein kinase activity // traceable author statement /// 0006916 // anti-apoptosis // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007258 // JUN phosphorylation // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from sequence or structural similarity /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0043508 // negative regulation of JUN kinase activity // inferred from electronic annotation /// 0046328 // regulation of JNK cascade // inferred from sequence or structural similarity /// 0046328 // regulation of JNK cascade // inferred from electronic annotation /// 0046329 // negative regulation of JNK cascade // inferred from electronic annotation","0005624 // membrane fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0044294 // dendritic growth cone // inferred from electronic annotation /// 0044295 // axonal growth cone // inferred from electronic annotation /// 0044297 // cell body // inferred from electronic annotation /// 0044302 // dentate gyrus mossy fiber // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0004860 // protein kinase inhibitor activity // traceable author statement /// 0005078 // MAP-kinase scaffold activity // inferred from physical interaction /// 0005078 // MAP-kinase scaffold activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008432 // JUN kinase binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0019894 // kinesin binding // inferred from physical interaction /// 0019894 // kinesin binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0031434 // mitogen-activated protein kinase kinase binding // inferred from electronic annotation /// 0031435 // mitogen-activated protein kinase kinase kinase binding // inferred from electronic annotation","chr11:45907201-45928016 (+) // 93.43 // p11.2"]
["11750026_a_at",0.020541191,-0.020541191,0.040938377,-0.042067528,0.024590492,-0.0398674,0.6802155,0.31245968,1.0229679,0.032760922,1.0229679,"up","DNM1L",10059.0,"0003374 // dynamin polymerization involved in mitochondrial fission // inferred from direct assay /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006921 // cellular component disassembly involved in apoptotic process // traceable author statement /// 0010821 // regulation of mitochondrion organization // inferred from mutant phenotype /// 0016559 // peroxisome fission // inferred from direct assay /// 0016559 // peroxisome fission // inferred from mutant phenotype /// 0043653 // mitochondrial fragmentation involved in apoptotic process // inferred from mutant phenotype /// 0050714 // positive regulation of protein secretion // inferred from direct assay /// 0051289 // protein homotetramerization // inferred from direct assay /// 0070584 // mitochondrion morphogenesis // inferred from mutant phenotype /// 0090141 // positive regulation of mitochondrial fission // traceable author statement /// 0090149 // membrane fission involved in mitochondrial fission // inferred from direct assay /// 0090200 // positive regulation of release of cytochrome c from mitochondria // inferred from mutant phenotype /// 1900063 // regulation of peroxisome organization // inferred from mutant phenotype /// 2001244 // positive regulation of intrinsic apoptotic signaling pathway // inferred from mutant phenotype","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from direct assay /// 0005741 // mitochondrial outer membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction","chr12:32832253-32883995 (+) // 100.0 // p11.21"]
["11753468_x_at",0.08255029,0.03008318,-0.12995005,0.2377944,-0.03008318,-0.16300821,0.9626583,0.8849293,-1.0144327,-0.020673111,1.0144327,"down","AMT",275.0,"0006546 // glycine catabolic process // inferred from electronic annotation /// 0006546 // glycine catabolic process // traceable author statement /// 0032259 // methylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005739 // mitochondrion // traceable author statement","0004047 // aminomethyltransferase activity // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008483 // transaminase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr3:49454962-49459884 (-) // 100.0 // p21.31"]
["11756584_s_at",0.06254959,0.021828651,-0.00541687,-0.11960602,-0.07642555,0.00541687,0.45368788,0.09712042,1.064266,0.08985873,1.064266,"up","TOX4",9878.0,"","0000785 // chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0072357 // PTW/PP1 phosphatase complex // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr14:21957357-21965111 (+) // 98.89 // q11.2"]
["11758238_s_at",0.01666832,0.060415268,-0.15319633,0.032793045,-0.01666832,-0.027534485,0.92060405,0.7661274,-1.0150619,-0.021567645,1.0150619,"down","ABCC4",10257.0,"0002576 // platelet degranulation // traceable author statement /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031088 // platelet dense granule membrane // inferred from direct assay /// 0031088 // platelet dense granule membrane // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0005254 // chloride channel activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016404 // 15-hydroxyprostaglandin dehydrogenase (NAD+) activity // non-traceable author statement /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0042626 // ATPase activity, coupled to transmembrane movement of substances // inferred from electronic annotation","chr13:95672089-95672621 (-) // 91.71 // q32.1"]
["11719961_s_at",0.0052633286,0.035446167,0.028475761,-0.08731842,-0.0052633286,-0.024059296,0.42389822,0.07916584,1.0438701,0.06194218,1.0438701,"up","CTBP1",1487.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0019079 // viral genome replication // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0031065 // positive regulation of histone deacetylation // inferred from mutant phenotype /// 0034401 // regulation of transcription by chromatin organization // inferred from mutant phenotype /// 0035067 // negative regulation of histone acetylation // inferred from mutant phenotype /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0050872 // white fat cell differentiation // inferred from sequence or structural similarity /// 0050872 // white fat cell differentiation // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from mutant phenotype /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0090241 // negative regulation of histone H4 acetylation // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0017053 // transcriptional repressor complex // inferred from direct assay /// 0017053 // transcriptional repressor complex // inferred from sequence or structural similarity /// 0017053 // transcriptional repressor complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0001106 // RNA polymerase II transcription corepressor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // traceable author statement /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016616 // oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0048037 // cofactor binding // inferred from electronic annotation /// 0051287 // NAD binding // inferred from sequence or structural similarity /// 0051287 // NAD binding // inferred from electronic annotation","chr4:1205232-1242909 (-) // 88.65 // p16.3"]
["11754371_a_at",0.005683899,-0.047989845,0.066372395,-0.005683899,0.025788784,-0.07185316,0.8450163,0.59494144,1.0176712,0.025271554,1.0176712,"up","FAM102A",399665.0,"","","","chr9:130703155-130712998 (-) // 98.81 // q34.11"]
["11732896_a_at",-0.11665106,0.09224081,0.03818941,0.17785788,-0.11665106,-0.03818941,0.9934663,0.9786264,-1.0021368,-0.0030795,1.0021368,"down","HSD11B1L",374875.0,"0008152 // metabolic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation","chr19:5681034-5688532 (+) // 92.23 // p13.3"]
["11751767_a_at",-0.061009407,-0.07170534,0.04826927,0.08919859,0.014122009,-0.014122009,0.67430824,0.30458882,-1.040936,-0.05788136,1.040936,"down","CKM",1158.0,"0006600 // creatine metabolic process // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046314 // phosphocreatine biosynthetic process // inferred from electronic annotation","0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004111 // creatine kinase activity // inferred from electronic annotation /// 0004111 // creatine kinase activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr19:45809917-45826132 (-) // 71.68 // q13.32"]
["11731861_at",-0.043827534,0.02708149,-0.02708149,0.1749003,-0.038024902,0.091397285,0.62196016,0.23855971,-1.0648868,-0.09070009,1.0648868,"down","ZNF720",124411.0,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation","chr16:31724549-31772886 (+) // 75.48 // p11.2"]
["11763778_a_at",0.23451042,-0.059428215,0.0,0.2748785,-0.113399506,0.0,0.9931564,0.97672415,1.003148,0.0045344126,1.003148,"up","MCM3AP-AS1",114044.0,"","","","chr21:47649147-47662899 (+) // 71.32 // q22.3"]
["11736704_a_at",0.031270266,0.22946191,-0.0019433498,0.0019435883,-0.16472363,-0.27352858,0.45519587,0.09819956,1.1742171,0.23169917,1.1742171,"up","C6",729.0,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from electronic annotation /// 0006955 // immune response // inferred from electronic annotation /// 0006956 // complement activation // traceable author statement /// 0006958 // complement activation, classical pathway // inferred from electronic annotation /// 0019835 // cytolysis // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005579 // membrane attack complex // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr5:41142338-41261588 (-) // 94.18 // p13.1"]
["11725854_a_at",-0.019460678,0.028900623,-0.036665916,-0.092321396,0.019460201,0.090847015,0.9346873,0.80387557,-1.0105009,-0.015070618,1.0105009,"down","KIAA0564",23078.0,"0006200 // ATP catabolic process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation","chr13:42293472-42535221 (-) // 98.77 // q14.11"]
["11731665_a_at",-0.08736181,-0.04932213,0.012556553,-0.012556553,0.040179253,0.018772602,0.54314613,0.15908867,-1.0401856,-0.05684093,1.0401856,"down","PDGFB",5155.0,"0001568 // blood vessel development // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001892 // embryonic placenta development // inferred from sequence or structural similarity /// 0001892 // embryonic placenta development // inferred from electronic annotation /// 0001938 // positive regulation of endothelial cell proliferation // inferred from direct assay /// 0001938 // positive regulation of endothelial cell proliferation // inferred from electronic annotation /// 0002548 // monocyte chemotaxis // inferred from direct assay /// 0002576 // platelet degranulation // traceable author statement /// 0003104 // positive regulation of glomerular filtration // inferred from sequence or structural similarity /// 0003104 // positive regulation of glomerular filtration // inferred from electronic annotation /// 0006260 // DNA replication // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006929 // substrate-dependent cell migration // inferred from electronic annotation /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from sequence or structural similarity /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007507 // heart development // inferred from sequence or structural similarity /// 0007507 // heart development // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0009611 // response to wounding // inferred from direct assay /// 0009611 // response to wounding // non-traceable author statement /// 0010033 // response to organic substance // inferred from electronic annotation /// 0010512 // negative regulation of phosphatidylinositol biosynthetic process // inferred from direct assay /// 0010544 // negative regulation of platelet activation // inferred from direct assay /// 0014068 // positive regulation of phosphatidylinositol 3-kinase cascade // inferred from direct assay /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0014911 // positive regulation of smooth muscle cell migration // inferred from direct assay /// 0014911 // positive regulation of smooth muscle cell migration // inferred from electronic annotation /// 0016049 // cell growth // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from direct assay /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0030031 // cell projection assembly // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030097 // hemopoiesis // inferred from mutant phenotype /// 0030168 // platelet activation // traceable author statement /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // inferred from electronic annotation /// 0031954 // positive regulation of protein autophosphorylation // inferred from direct assay /// 0032147 // activation of protein kinase activity // inferred from direct assay /// 0032148 // activation of protein kinase B activity // inferred from direct assay /// 0032355 // response to estradiol stimulus // inferred from electronic annotation /// 0032868 // response to insulin stimulus // inferred from electronic annotation /// 0035793 // positive regulation of metanephric mesenchymal cell migration by platelet-derived growth factor receptor-beta signaling pathway // inferred from direct assay /// 0038001 // paracrine signaling // inferred from sequence or structural similarity /// 0038001 // paracrine signaling // inferred from electronic annotation /// 0042060 // wound healing // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0043406 // positive regulation of MAP kinase activity // inferred from direct assay /// 0043406 // positive regulation of MAP kinase activity // inferred from electronic annotation /// 0043410 // positive regulation of MAPK cascade // inferred from mutant phenotype /// 0043536 // positive regulation of blood vessel endothelial cell migration // inferred from direct assay /// 0043552 // positive regulation of phosphatidylinositol 3-kinase activity // inferred from direct assay /// 0043627 // response to estrogen stimulus // inferred from electronic annotation /// 0045737 // positive regulation of cyclin-dependent protein kinase activity // inferred from direct assay /// 0045740 // positive regulation of DNA replication // inferred from direct assay /// 0045743 // positive regulation of fibroblast growth factor receptor signaling pathway // inferred from electronic annotation /// 0045840 // positive regulation of mitosis // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from direct assay /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from electronic annotation /// 0048146 // positive regulation of fibroblast proliferation // inferred from direct assay /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from direct assay /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from electronic annotation /// 0050730 // regulation of peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0050921 // positive regulation of chemotaxis // inferred from direct assay /// 0051781 // positive regulation of cell division // inferred from electronic annotation /// 0060326 // cell chemotaxis // inferred from direct assay /// 0060445 // branching involved in salivary gland morphogenesis // inferred from electronic annotation /// 0060664 // epithelial cell proliferation involved in salivary gland morphogenesis // inferred from electronic annotation /// 0061098 // positive regulation of protein tyrosine kinase activity // inferred from direct assay /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from direct assay /// 0071506 // cellular response to mycophenolic acid // inferred from sequence or structural similarity /// 0071506 // cellular response to mycophenolic acid // inferred from electronic annotation /// 0072126 // positive regulation of glomerular mesangial cell proliferation // inferred from direct assay /// 0072255 // metanephric glomerular mesangial cell development // inferred from sequence or structural similarity /// 0072255 // metanephric glomerular mesangial cell development // inferred from electronic annotation /// 0072262 // metanephric glomerular mesangial cell proliferation involved in metanephros development // inferred from electronic annotation /// 0072264 // metanephric glomerular endothelium development // inferred from electronic annotation /// 0072593 // reactive oxygen species metabolic process // inferred from mutant phenotype /// 0090280 // positive regulation of calcium ion import // inferred from direct assay /// 1900127 // positive regulation of hyaluronan biosynthetic process // inferred from direct assay /// 2000379 // positive regulation of reactive oxygen species metabolic process // inferred from direct assay /// 2000573 // positive regulation of DNA biosynthetic process // inferred from direct assay /// 2000591 // positive regulation of metanephric mesenchymal cell migration // inferred from direct assay /// 2000591 // positive regulation of metanephric mesenchymal cell migration // inferred from electronic annotation","0000139 // Golgi membrane // traceable author statement /// 0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from sequence or structural similarity /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0031093 // platelet alpha granule lumen // traceable author statement","0005161 // platelet-derived growth factor receptor binding // inferred from direct assay /// 0005161 // platelet-derived growth factor receptor binding // inferred from physical interaction /// 0005161 // platelet-derived growth factor receptor binding // non-traceable author statement /// 0005161 // platelet-derived growth factor receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005518 // collagen binding // inferred from direct assay /// 0008083 // growth factor activity // inferred from electronic annotation /// 0016176 // superoxide-generating NADPH oxidase activator activity // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0043498 // cell surface binding // inferred from direct assay /// 0043498 // cell surface binding // inferred from electronic annotation /// 0043499 // eukaryotic cell surface binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from physical interaction /// 0048407 // platelet-derived growth factor binding // inferred from physical interaction","chr22:39619363-39641060 (-) // 87.72 // q13.1"]
["11750949_a_at",0.01659584,0.019999504,-0.09647274,-0.119296074,0.11607313,-0.01659584,0.9585838,0.8726128,-1.0092984,-0.013352834,1.0092984,"down","NMT2",9397.0,"0006499 // N-terminal protein myristoylation // inferred from electronic annotation /// 0009249 // protein lipoylation // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0046788 // egress of virus within host cell // traceable author statement","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay","0003824 // catalytic activity // traceable author statement /// 0004379 // glycylpeptide N-tetradecanoyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation","chr10:15151019-15202124 (-) // 97.54 // p13"]
["11750948_a_at",0.040928364,-0.1603384,-0.1514802,0.015839577,0.09227419,-0.015839577,0.5577993,0.17298518,-1.0875297,-0.121054746,1.0875297,"down","MYCN",4613.0,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement","0000785 // chromatin // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr2:16080685-16086607 (+) // 95.97 // p24.3"]
["11727571_a_at",0.20859528,-0.1394093,-0.007427454,-0.0024166107,0.0024168491,0.3588643,0.83008933,0.56204414,-1.0710571,-0.09903537,1.0710571,"down","MARK1",4139.0,"0000226 // microtubule cytoskeleton organization // inferred from electronic annotation /// 0001764 // neuron migration // inferred from sequence or structural similarity /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0007010 // cytoskeleton organization // inferred from sequence or structural similarity /// 0007010 // cytoskeleton organization // inferred from electronic annotation /// 0007243 // intracellular protein kinase cascade // inferred from direct assay /// 0007243 // intracellular protein kinase cascade // inferred from electronic annotation /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from sequence or structural similarity /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from direct assay /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0001786 // phosphatidylserine binding // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0005546 // phosphatidylinositol-4,5-bisphosphate binding // inferred from direct assay /// 0008289 // lipid binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050321 // tau-protein kinase activity // inferred from sequence or structural similarity /// 0050321 // tau-protein kinase activity // inferred from electronic annotation /// 0070300 // phosphatidic acid binding // inferred from direct assay","chr1:220701567-220837798 (+) // 97.53 // q41"]
["11745088_x_at",0.015072346,-0.018418312,-0.015072823,-0.081463814,0.0535717,0.01949501,0.9823122,0.94031113,-1.0023181,-0.0033405041,1.0023181,"down","RPH3AL",9501.0,"0006886 // intracellular protein transport // inferred from electronic annotation /// 0006887 // exocytosis // inferred from electronic annotation /// 0006887 // exocytosis // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030658 // transport vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0008092 // cytoskeletal protein binding // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0017137 // Rab GTPase binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:62292-202888 (-) // 82.33 // p13.3"]
["11722041_s_at",0.035465717,-0.0017929077,0.024796009,-0.07885313,0.0017924309,-0.16636944,0.48139971,0.113429606,1.0722438,0.10063299,1.0722438,"up","TEX2",55852.0,"0006665 // sphingolipid metabolic process // non-traceable author statement /// 0007165 // signal transduction // non-traceable author statement","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0005543 // phospholipid binding // inferred from electronic annotation","chr17:62224794-62340660 (-) // 97.94 // q23.3"]
["11746497_a_at",0.042355537,0.07302904,-0.06328344,-0.06271982,0.005883217,-0.005883217,0.77379394,0.455817,1.0268843,0.038273666,1.0268843,"up","MSI2",124540.0,"0048864 // stem cell development // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005844 // polysome // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003727 // single-stranded RNA binding // inferred from electronic annotation /// 0008266 // poly(U) RNA binding // inferred from electronic annotation","chr17:55333211-55757482 (+) // 95.86 // q22"]
["11744912_a_at",-0.09750056,-0.09106517,0.09106541,0.16736937,0.22596383,-0.10595131,0.7027061,0.34348252,-1.0930005,-0.1282941,1.0930005,"down","NFATC4",4776.0,"0001569 // patterning of blood vessels // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006954 // inflammatory response // traceable author statement /// 0007507 // heart development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0034644 // cellular response to UV // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0045333 // cellular respiration // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0051145 // smooth muscle cell differentiation // inferred from electronic annotation /// 0055001 // muscle cell development // inferred from electronic annotation /// 0071285 // cellular response to lithium ion // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0045111 // intermediate filament cytoskeleton // inferred from direct assay","0000981 // sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003713 // transcription coactivator activity // traceable author statement","chr14:24837349-24847261 (+) // 98.33 // q12"]
["11746956_a_at",0.048831463,1.8167496E-4,-0.1775999,-1.8167496E-4,0.07927704,-0.02654171,0.78280026,0.47036162,-1.0427405,-0.06038012,1.0427405,"down","ABHD2",11057.0,"0009611 // response to wounding // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0004091 // carboxylesterase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr15:89631710-89745591 (+) // 91.33 // q26.1"]
["11743336_a_at",0.0064840317,-0.0064840317,0.019625664,-0.021036148,0.024139404,-0.036657333,0.75217354,0.41963726,1.012363,0.017726624,1.012363,"up","UIMC1",51720.0,"0006281 // DNA repair // inferred from electronic annotation /// 0006302 // double-strand break repair // inferred from mutant phenotype /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0010212 // response to ionizing radiation // inferred from mutant phenotype /// 0016568 // chromatin modification // inferred from electronic annotation /// 0031572 // G2/M transition DNA damage checkpoint // inferred from mutant phenotype /// 0045739 // positive regulation of DNA repair // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0070537 // histone H2A K63-linked deubiquitination // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0070531 // BRCA1-A complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0042393 // histone binding // inferred from direct assay /// 0046965 // retinoid X receptor binding // inferred from electronic annotation /// 0070530 // K63-linked polyubiquitin binding // inferred from direct assay","chr5:176332008-176433443 (-) // 96.99 // q35.2"]
["11719196_s_at",-0.075335026,0.009198189,-0.13070631,0.07578707,-0.009198189,0.059766293,0.44100115,0.089636825,-1.0775335,-0.1077327,1.0775335,"down","FAM127B",26071.0,"","","","chrX:134184907-134186221 (-) // 95.96 // q26.3"]
["11744925_a_at",0.16349411,0.0151228905,-0.04114294,0.02803564,-0.015723228,-0.015123367,0.7964562,0.4974324,1.0329437,0.046761658,1.0329437,"up","TUBGCP3",10426.0,"0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000226 // microtubule cytoskeleton organization // inferred from electronic annotation /// 0000278 // mitotic cell cycle // traceable author statement /// 0007020 // microtubule nucleation // non-traceable author statement /// 0007020 // microtubule nucleation // inferred from electronic annotation /// 0007338 // single fertilization // non-traceable author statement","0000922 // spindle pole // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005813 // centrosome // non-traceable author statement /// 0005814 // centriole // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // non-traceable author statement /// 0005827 // polar microtubule // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation","0005198 // structural molecule activity // non-traceable author statement /// 0005200 // structural constituent of cytoskeleton // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0043015 // gamma-tubulin binding // inferred from direct assay","chr13:113153122-113242440 (-) // 98.14 // q34"]
["11751615_a_at",-0.022379875,-0.006542206,-0.1317997,0.079315186,0.006542206,0.023739815,0.48594528,0.11632361,-1.0644486,-0.09010628,1.0644486,"down","TM9SF3",56889.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005488 // binding // inferred from direct assay","chr10:98281921-98319442 (-) // 100.0 // q24.1"]
["11760488_at",0.019919395,0.06490445,-0.0904932,-0.23860335,0.057008743,-0.019919157,0.8237948,0.5489551,1.0462891,0.06528152,1.0462891,"up","SNTB1",6641.0,"0006936 // muscle contraction // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016010 // dystrophin-associated glycoprotein complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0042383 // sarcolemma // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0030165 // PDZ domain binding // inferred from electronic annotation","chr8:121823528-121824620 (+) // 91.01 // q24.12"]
["11761709_x_at",-5.171299E-4,5.168915E-4,-0.107656,-0.21086693,0.1463995,0.061600447,0.92407584,0.77380365,-1.0245069,-0.034929737,1.0245069,"down","WDR13",64743.0,"","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","","chrX:48455922-48459480 (+) // 76.58 // p11.23"]
["11755505_a_at",-0.011651516,-0.07512283,-0.019553661,0.10608101,0.011651516,0.037436485,0.3966469,0.06510004,-1.0622811,-0.087165624,1.0622811,"down","ZSWIM7",125150.0,"0000724 // double-strand break repair via homologous recombination // inferred from mutant phenotype /// 0006281 // DNA repair // inferred from electronic annotation /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0050821 // protein stabilization // inferred from mutant phenotype","0005634 // nucleus // inferred from electronic annotation /// 0097196 // Shu complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:15881044-15902984 (-) // 88.47 // p12"]
["11728314_at",-0.07532692,-0.002462387,0.15898037,0.06506729,0.002462387,-0.016875267,0.9660779,0.89656806,1.0070804,0.010178916,1.0070804,"up","ZNF148",7707.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006461 // protein complex assembly // inferred from electronic annotation /// 0006968 // cellular defense response // traceable author statement /// 0007276 // gamete generation // inferred from electronic annotation /// 0010629 // negative regulation of gene expression // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:124944404-125094198 (-) // 96.37 // q21.2"]
["11754000_x_at",-0.009190559,-9.6416473E-4,0.08776379,9.6416473E-4,0.022878647,-0.019186974,0.8008159,0.5060629,1.0169986,0.024317762,1.0169986,"up","CD58",965.0,"0007155 // cell adhesion // non-traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0016337 // cell-cell adhesion // non-traceable author statement /// 0050900 // leukocyte migration // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031225 // anchored to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr1:117057155-117113624 (-) // 99.64 // p13.1"]
["11756184_a_at",-0.12737012,0.03782749,-0.11083484,-0.03782749,0.19538069,0.085231304,0.5430556,0.15878972,-1.1078179,-0.14772074,1.1078179,"down","UNC5CL",222643.0,"0007165 // signal transduction // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr6:40994629-40999879 (-) // 85.5 // p21.1"]
["11741308_a_at",-0.027636051,-0.09561682,-0.17561197,0.15322542,0.027635574,0.10577154,0.28221,0.025659524,-1.1448557,-0.19516581,1.1448557,"down","XPR1",9213.0,"0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0009615 // response to virus // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // traceable author statement /// 0004930 // G-protein coupled receptor activity // traceable author statement","chr1:180601145-180859413 (+) // 95.94 // q25.3"]
["11735180_a_at",0.03136015,-0.016610622,-0.035325527,0.016610622,0.32757282,-0.11031628,0.82637054,0.55430984,-1.0605513,-0.084814385,1.0605513,"down","DLX2",1746.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007420 // brain development // traceable author statement /// 0009954 // proximal/distal pattern formation // inferred from electronic annotation /// 0021766 // hippocampus development // inferred from electronic annotation /// 0021772 // olfactory bulb development // inferred from electronic annotation /// 0021879 // forebrain neuron differentiation // inferred from electronic annotation /// 0021882 // regulation of transcription from RNA polymerase II promoter involved in forebrain neuron fate commitment // inferred from electronic annotation /// 0021892 // cerebral cortex GABAergic interneuron differentiation // inferred from electronic annotation /// 0021893 // cerebral cortex GABAergic interneuron fate commitment // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0042475 // odontogenesis of dentin-containing tooth // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048701 // embryonic cranial skeleton morphogenesis // inferred from electronic annotation /// 0048706 // embryonic skeletal system development // inferred from electronic annotation /// 0048715 // negative regulation of oligodendrocyte differentiation // inferred from electronic annotation /// 0048755 // branching morphogenesis of a nerve // inferred from electronic annotation /// 0051216 // cartilage development // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0000976 // transcription regulatory region sequence-specific DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003727 // single-stranded RNA binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr2:172964166-172967628 (-) // 92.85 // q31.1"]
["11728829_at",-0.00481987,0.021097183,0.023486137,-0.06794834,0.00481987,-0.10941315,0.47559902,0.11023509,1.0502759,0.07076839,1.0502759,"up","INHBB",3625.0,"0001541 // ovarian follicle development // non-traceable author statement /// 0006952 // defense response // traceable author statement /// 0009267 // cellular response to starvation // inferred from sequence or structural similarity /// 0009267 // cellular response to starvation // inferred from electronic annotation /// 0009605 // response to external stimulus // inferred from direct assay /// 0030154 // cell differentiation // non-traceable author statement /// 0032869 // cellular response to insulin stimulus // inferred from sequence or structural similarity /// 0032869 // cellular response to insulin stimulus // inferred from electronic annotation /// 0032924 // activin receptor signaling pathway // inferred from direct assay /// 0040007 // growth // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0044320 // cellular response to leptin stimulus // inferred from electronic annotation /// 0045444 // fat cell differentiation // inferred from sequence or structural similarity /// 0045444 // fat cell differentiation // inferred from electronic annotation /// 0046676 // negative regulation of insulin secretion // inferred from sequence or structural similarity /// 0046676 // negative regulation of insulin secretion // inferred from electronic annotation /// 0046881 // positive regulation of follicle-stimulating hormone secretion // inferred from physical interaction /// 0046882 // negative regulation of follicle-stimulating hormone secretion // inferred from physical interaction /// 0048178 // negative regulation of hepatocyte growth factor biosynthetic process // inferred from direct assay /// 0048599 // oocyte development // inferred from electronic annotation /// 0060279 // positive regulation of ovulation // inferred from sequence or structural similarity /// 0060279 // positive regulation of ovulation // inferred from electronic annotation /// 0071397 // cellular response to cholesterol // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0005125 // cytokine activity // traceable author statement /// 0005179 // hormone activity // traceable author statement /// 0005179 // hormone activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046789 // host cell surface receptor binding // traceable author statement","chr2:121103717-121109383 (+) // 96.62 // q14.2"]
["11726150_s_at",5.0640106E-4,0.011792183,0.025096893,-0.0119457245,-5.0640106E-4,-0.0952301,0.5759172,0.19016036,1.0340883,0.048359316,1.0340883,"up","PPIP5K2",23262.0,"0006020 // inositol metabolic process // inferred from sequence or structural similarity /// 0016310 // phosphorylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000827 // inositol-1,3,4,5,6-pentakisphosphate kinase activity // inferred from sequence or structural similarity /// 0000832 // inositol hexakisphosphate 5-kinase activity // inferred from sequence or structural similarity /// 0000832 // inositol hexakisphosphate 5-kinase activity // inferred from electronic annotation /// 0003993 // acid phosphatase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0033857 // diphosphoinositol-pentakisphosphate kinase activity // inferred from sequence or structural similarity /// 0033857 // diphosphoinositol-pentakisphosphate kinase activity // inferred from electronic annotation /// 0052723 // inositol hexakisphosphate 1-kinase activity // inferred from electronic annotation /// 0052724 // inositol hexakisphosphate 3-kinase activity // inferred from electronic annotation","chr5:102465256-102539222 (+) // 98.3 // q21.1"]
["11740286_a_at",-0.021890163,0.0025632381,-0.0025632381,0.24664664,-0.117259026,0.020657778,0.85559285,0.61849284,-1.0405252,-0.057311904,1.0405252,"down","ZNF626",199777.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:20802744-20844402 (-) // 71.03 // p12"]
["11757538_a_at",0.14294958,0.0026955605,0.16549253,-0.0026950836,-0.06691122,-0.03378439,0.39279395,0.06333501,1.100513,0.13817616,1.100513,"up","GOT1",2805.0,"0000096 // sulfur amino acid metabolic process // traceable author statement /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006094 // gluconeogenesis // traceable author statement /// 0006103 // 2-oxoglutarate metabolic process // inferred from sequence or structural similarity /// 0006107 // oxaloacetate metabolic process // inferred from electronic annotation /// 0006114 // glycerol biosynthetic process // inferred from electronic annotation /// 0006520 // cellular amino acid metabolic process // inferred from electronic annotation /// 0006531 // aspartate metabolic process // inferred from sequence or structural similarity /// 0006531 // aspartate metabolic process // inferred from electronic annotation /// 0006532 // aspartate biosynthetic process // inferred from electronic annotation /// 0006533 // aspartate catabolic process // inferred from direct assay /// 0006536 // glutamate metabolic process // inferred from sequence or structural similarity /// 0006595 // polyamine metabolic process // traceable author statement /// 0008652 // cellular amino acid biosynthetic process // traceable author statement /// 0009058 // biosynthetic process // inferred from electronic annotation /// 0019509 // L-methionine salvage from methylthioadenosine // traceable author statement /// 0019550 // glutamate catabolic process to aspartate // inferred from electronic annotation /// 0019551 // glutamate catabolic process to 2-oxoglutarate // inferred from electronic annotation /// 0032869 // cellular response to insulin stimulus // inferred from expression pattern /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0043648 // dicarboxylic acid metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0051384 // response to glucocorticoid stimulus // inferred from expression pattern /// 0055089 // fatty acid homeostasis // inferred from electronic annotation","0005625 // soluble fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0043679 // axon terminus // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004069 // L-aspartate:2-oxoglutarate aminotransferase activity // inferred from direct assay /// 0004069 // L-aspartate:2-oxoglutarate aminotransferase activity // inferred from sequence or structural similarity /// 0004069 // L-aspartate:2-oxoglutarate aminotransferase activity // traceable author statement /// 0004069 // L-aspartate:2-oxoglutarate aminotransferase activity // inferred from electronic annotation /// 0004609 // phosphatidylserine decarboxylase activity // inferred from electronic annotation /// 0008483 // transaminase activity // traceable author statement /// 0008483 // transaminase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation /// 0031406 // carboxylic acid binding // inferred from electronic annotation /// 0080130 // L-phenylalanine:2-oxoglutarate aminotransferase activity // inferred from electronic annotation","chr10:101156684-101163803 (-) // 89.41 // q24.2"]
["11762390_at",0.00961113,-0.009610891,-0.088994026,-0.21047401,0.00961113,0.117242336,0.9959061,0.98670787,-1.0012423,-0.0017911189,1.0012423,"down","LRRTM1",347730.0,"","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030424 // axon // inferred from direct assay /// 0030426 // growth cone // inferred from direct assay","","chr2:80525305-80531852 (-) // 93.86 // p12"]
["11759384_at",-0.016398668,0.034074068,0.016398668,-0.15303612,0.040752888,-0.038309097,0.7072425,0.34961933,1.0435903,0.06155545,1.0435903,"up","DEFB128",245939.0,"0006952 // defense response // inferred from electronic annotation /// 0042742 // defense response to bacterium // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","","chr20:168493-170322 (-) // 100.0 // p13"]
["11761913_at",-0.14679289,0.11615014,0.0090146065,-0.0090146065,-0.06622386,0.105306864,0.9541058,0.85976726,-1.012016,-0.017232182,1.012016,"down","","","","","","chr5:75440845-75442622 (+) // 67.13 // q13.3"]
["11746414_a_at",0.0393219,0.011872292,0.14573383,-0.011872292,-0.031422615,-0.055675507,0.42884532,0.08224985,1.0707582,0.09863275,1.0707582,"up","FAM107B",83641.0,"","","","chr10:14561519-14646417 (-) // 93.85 // p13"]
["11717970_at",0.07049847,-0.12355089,0.005674839,-0.005675316,0.023758888,-0.011251926,0.9227449,0.7711789,-1.0126038,-0.018069746,1.0126038,"down","FAM20B",9917.0,"0016310 // phosphorylation // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016773 // phosphotransferase activity, alcohol group as acceptor // inferred from direct assay","chr1:178995030-179045701 (+) // 87.94 // q25.2"]
["11746258_a_at",-0.18556309,0.093832016,-0.08265114,0.015705109,0.13792229,-0.015705109,0.69367206,0.330573,-1.0748248,-0.104101524,1.0748248,"down","SP8",221833.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0009953 // dorsal/ventral pattern formation // inferred from electronic annotation /// 0009954 // proximal/distal pattern formation // inferred from electronic annotation /// 0030326 // embryonic limb morphogenesis // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:20821595-20826509 (-) // 94.84 // p21.1"]
["11738692_at",-0.2531104,-0.073548555,0.13900328,0.03066492,0.08324695,-0.03066492,0.791561,0.48680925,-1.0645921,-0.0903008,1.0645921,"down","OR5H6",79295.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr3:97983087-97984200 (+) // 100.0 // q11.2"]
["11727388_x_at",-0.062197685,0.0,0.074116945,0.0,0.059013605,-0.013391972,0.93898076,0.8161324,-1.0078173,-0.011234081,1.0078173,"down","RSU1",6251.0,"0007165 // signal transduction // traceable author statement /// 0007265 // Ras protein signal transduction // inferred from electronic annotation /// 0034329 // cell junction assembly // traceable author statement","0005829 // cytosol // traceable author statement","","chr10:16633139-16859527 (-) // 70.75 // p13"]
["11757335_s_at",0.024658203,-0.13557625,0.0018796921,0.04176712,-0.0018796921,-0.12684107,0.9755149,0.9225376,-1.0051157,-0.007361649,1.0051157,"down","MTIF3",219402.0,"0006412 // translation // inferred from sequence or structural similarity /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred from electronic annotation /// 0006446 // regulation of translational initiation // inferred from sequence or structural similarity /// 0032790 // ribosome disassembly // inferred from sequence or structural similarity","0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005739 // mitochondrion // inferred from electronic annotation","0003743 // translation initiation factor activity // inferred from electronic annotation /// 0008135 // translation factor activity, nucleic acid binding // inferred from sequence or structural similarity /// 0043024 // ribosomal small subunit binding // inferred from sequence or structural similarity","chr13:28009779-28014286 (-) // 96.77 // q12.2"]
["11745415_a_at",0.008196831,0.055267334,0.087711334,-0.008196831,-0.19593143,-0.023812294,0.49386328,0.1213287,1.0915453,0.12637205,1.0915453,"up","DIAPH1",1729.0,"0007010 // cytoskeleton organization // inferred from mutant phenotype /// 0007605 // sensory perception of sound // inferred from electronic annotation /// 0007605 // sensory perception of sound // traceable author statement /// 0008360 // regulation of cell shape // inferred from mutant phenotype /// 0016043 // cellular component organization // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030041 // actin filament polymerization // inferred from electronic annotation /// 0032886 // regulation of microtubule-based process // inferred from mutant phenotype /// 0035372 // protein localization to microtubule // inferred from mutant phenotype /// 0051279 // regulation of release of sequestered calcium ion into cytosol // inferred from mutant phenotype /// 0071420 // cellular response to histamine // inferred from mutant phenotype","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0072686 // mitotic spindle // inferred from direct assay","0003779 // actin binding // inferred from electronic annotation /// 0005102 // receptor binding // non-traceable author statement /// 0005522 // profilin binding // inferred from electronic annotation /// 0017048 // Rho GTPase binding // inferred from electronic annotation /// 0044325 // ion channel binding // inferred from physical interaction","chr5:140894588-140998496 (-) // 98.16 // q31.3"]
["11740203_a_at",-0.11624336,-0.218678,0.08045006,0.031454563,0.009100914,-0.009100914,0.70187324,0.34236124,-1.0682939,-0.09530864,1.0682939,"down","C10orf32 /// C10orf32-AS3MT","100528007 /// 119032","","","","chr10:104613966-104624718 (+) // 96.14 // q24.32"]
["11729308_at",-0.102508545,-0.056540012,-0.02844286,0.062216282,0.04593277,0.02844286,0.20029292,0.010334997,-1.0777539,-0.108027786,1.0777539,"down","CLMP",79827.0,"","0005624 // membrane fraction // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005923 // tight junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","","chr11:122942175-123066013 (-) // 88.85 // q24.1"]
["11751872_x_at",-0.033303738,-0.06588125,0.0333035,-0.11802578,0.05967045,0.06588125,0.9064031,0.7333984,-1.0171053,-0.024469106,1.0171053,"down","EPGN",255324.0,"0000165 // MAPK cascade // inferred from sequence or structural similarity /// 0000187 // activation of MAPK activity // inferred from sequence or structural similarity /// 0001525 // angiogenesis // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0043406 // positive regulation of MAP kinase activity // inferred from direct assay /// 0045741 // positive regulation of epidermal growth factor-activated receptor activity // inferred from direct assay /// 0045840 // positive regulation of mitosis // inferred from direct assay /// 0050679 // positive regulation of epithelial cell proliferation // inferred from sequence or structural similarity","0005576 // extracellular region // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004708 // MAP kinase kinase activity // inferred from sequence or structural similarity /// 0005154 // epidermal growth factor receptor binding // inferred from direct assay /// 0008083 // growth factor activity // inferred from direct assay /// 0008083 // growth factor activity // inferred from electronic annotation","chr4:75174250-75178024 (+) // 73.4 // q13.3"]
["11716125_a_at",-0.0029530525,0.031514168,-0.047322273,0.069069386,0.0029530525,-0.0338068,0.8655363,0.6414989,-1.0132514,-0.018992202,1.0132514,"down","ZYX",7791.0,"0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation","0001725 // stress fiber // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0005913 // cell-cell adherens junction // inferred from direct assay /// 0005925 // focal adhesion // inferred from direct assay /// 0005925 // focal adhesion // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:143078172-143088204 (+) // 90.7 // q34"]
["11726095_at",-0.015349388,-0.14271688,0.062145233,-0.011134148,0.0111346245,0.049865723,0.7877809,0.479099,-1.0342578,-0.048595794,1.0342578,"down","RBMXL1",494115.0,"0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation","chr1:89445516-89458516 (-) // 81.3 // p22.2"]
["11733996_a_at",0.011998177,-0.0241251,0.07074547,-0.033958435,0.028803825,-0.011998177,0.79251975,0.48920384,1.0176611,0.025257189,1.0176611,"up","NADKD1",133686.0,"0008152 // metabolic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation","0003951 // NAD+ kinase activity // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr5:36192694-36242144 (-) // 84.02 // p13.2"]
["11753935_a_at",-0.14315319,-0.002363205,-0.12511563,0.11606383,0.020541906,0.002363205,0.41312322,0.07326568,-1.0992608,-0.1365337,1.0992608,"down","ATP6V1G3",127124.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0015992 // proton transport // inferred from electronic annotation /// 0033572 // transferrin transport // traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016471 // vacuolar proton-transporting V-type ATPase complex // inferred from electronic annotation","0008553 // hydrogen-exporting ATPase activity, phosphorylative mechanism // inferred from electronic annotation /// 0016820 // hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances // inferred from electronic annotation /// 0051117 // ATPase binding // inferred from physical interaction","chr1:198492353-198509805 (-) // 94.17 // q31.3"]
["11751327_a_at",0.004848957,-0.002006054,-0.051244736,0.023612976,0.002006054,-0.012229443,0.7215571,0.37208778,-1.0143793,-0.020597158,1.0143793,"down","FAM114A2",10827.0,"","","0017076 // purine nucleotide binding // non-traceable author statement","chr5:153372514-153418467 (-) // 99.71 // q33.2"]
["11758461_s_at",-0.10534811,0.04869485,0.062152863,-0.1037786,0.25311565,-0.04869461,0.9364887,0.80964065,-1.0222261,-0.031714324,1.0222261,"down","OPN1MW",2652.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007601 // visual perception // inferred from electronic annotation /// 0007601 // visual perception // traceable author statement /// 0007602 // phototransduction // inferred from electronic annotation /// 0018298 // protein-chromophore linkage // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation","0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0009881 // photoreceptor activity // inferred from electronic annotation /// 0009881 // photoreceptor activity // traceable author statement","chrX:153499015-153499469 (+) // 95.98 // q28 /// chrX:153461897-153462351 (+) // 95.98 // q28 /// chrX:153424767-153425221 (+) // 95.98 // q28"]
["11718965_s_at",0.013985634,0.07691288,0.06334305,-0.024882317,-0.08333874,-0.013985634,0.30989364,0.032898746,1.0659571,0.09214933,1.0659571,"up","NUFIP2",57532.0,"","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0042788 // polysomal ribosome // inferred from direct assay","0003723 // RNA binding // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr17:27582857-27621166 (-) // 94.03 // q11.2"]
["11722136_at",0.042001963,0.010039568,-0.023136377,0.006023884,-0.05137348,-0.006023884,0.7108356,0.35606942,1.0187213,0.026759475,1.0187213,"up","GUCY1A3",2982.0,"0006182 // cGMP biosynthetic process // traceable author statement /// 0006182 // cGMP biosynthetic process // inferred from electronic annotation /// 0007263 // nitric oxide mediated signal transduction // traceable author statement /// 0007263 // nitric oxide mediated signal transduction // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008015 // blood circulation // traceable author statement /// 0008217 // regulation of blood pressure // inferred from electronic annotation /// 0009190 // cyclic nucleotide biosynthetic process // inferred from electronic annotation /// 0009635 // response to herbicide // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0030828 // positive regulation of cGMP biosynthetic process // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0052565 // response to defense-related host nitric oxide production // inferred from electronic annotation /// 0060087 // relaxation of vascular smooth muscle // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0008074 // guanylate cyclase complex, soluble // traceable author statement /// 0008074 // guanylate cyclase complex, soluble // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004383 // guanylate cyclase activity // inferred from electronic annotation /// 0004383 // guanylate cyclase activity // traceable author statement /// 0004872 // receptor activity // traceable author statement /// 0005525 // GTP binding // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0016849 // phosphorus-oxygen lyase activity // inferred from electronic annotation /// 0020037 // heme binding // inferred from electronic annotation /// 0043167 // ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr4:156587876-156658211 (+) // 95.18 // q32.1"]
["11754142_x_at",0.030958176,0.024972916,0.035964966,-0.042390823,-0.024971962,-0.04072094,0.07745464,4.7826025E-4,1.0472893,0.06665996,1.0472893,"up","LOC100506248 /// LOC728026 /// MIR1244-1 /// MIR1244-2 /// MIR1244-3 /// PTMA","100302285 /// 100422872 /// 100422885 /// 100506248 /// 5757 /// 728026","0006351 // transcription, DNA-dependent // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement","","chr13:82264085-82264560 (+) // 71.46 // q31.1 /// chr2:232573299-232577586 (+) // 81.67 // q37.1 /// chr3:116745427-116745909 (+) // 76.88 // q13.31 /// chr5:118309373-118309845 (+) // 73.13 // q23.1"]
["11745031_at",-0.0049796104,0.0049796104,-0.12868333,0.005716324,0.13913369,-0.078599215,0.76626945,0.44400036,-1.046069,-0.06497805,1.046069,"down","PPP1R2P9",80316.0,"0006470 // protein dephosphorylation // non-traceable author statement /// 0009966 // regulation of signal transduction // inferred from electronic annotation /// 0043666 // regulation of phosphoprotein phosphatase activity // inferred from electronic annotation","","0004864 // protein phosphatase inhibitor activity // non-traceable author statement /// 0004864 // protein phosphatase inhibitor activity // inferred from electronic annotation","chrX:42636618-42637498 (-) // 96.58 // p11.3"]
["11723059_a_at",0.087831974,0.013339996,0.07586479,-0.05628252,-0.013339996,-0.08759451,0.2770934,0.024247035,1.0802895,0.11141796,1.0802895,"up","TAP2",6891.0,"0001916 // positive regulation of T cell mediated cytotoxicity // not recorded /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0002481 // antigen processing and presentation of exogenous protein antigen via MHC class Ib, TAP-dependent // not recorded /// 0002485 // antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway, TAP-dependent // not recorded /// 0002489 // antigen processing and presentation of endogenous peptide antigen via MHC class Ib via ER pathway, TAP-dependent // not recorded /// 0002489 // antigen processing and presentation of endogenous peptide antigen via MHC class Ib via ER pathway, TAP-dependent // inferred from mutant phenotype /// 0002504 // antigen processing and presentation of peptide or polysaccharide antigen via MHC class II // inferred from electronic annotation /// 0002591 // positive regulation of antigen processing and presentation of peptide antigen via MHC class I // not recorded /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006952 // defense response // traceable author statement /// 0006955 // immune response // inferred from electronic annotation /// 0006968 // cellular defense response // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0015833 // peptide transport // not recorded /// 0015833 // peptide transport // inferred from genetic interaction /// 0015833 // peptide transport // inferred from electronic annotation /// 0015833 // peptide transport // traceable author statement /// 0019060 // intracellular transport of viral proteins in host cell // inferred from mutant phenotype /// 0019882 // antigen processing and presentation // inferred from electronic annotation /// 0019885 // antigen processing and presentation of endogenous peptide antigen via MHC class I // inferred from direct assay /// 0019885 // antigen processing and presentation of endogenous peptide antigen via MHC class I // inferred from mutant phenotype /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0046967 // cytosol to ER transport // inferred from mutant phenotype /// 0046968 // peptide antigen transport // inferred from direct assay /// 0046968 // peptide antigen transport // inferred from mutant phenotype /// 0055085 // transmembrane transport // not recorded /// 0055085 // transmembrane transport // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005743 // mitochondrial inner membrane // not recorded /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005886 // plasma membrane // not recorded /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030176 // integral to endoplasmic reticulum membrane // inferred from direct assay /// 0030670 // phagocytic vesicle membrane // traceable author statement /// 0042613 // MHC class II protein complex // inferred from electronic annotation /// 0042825 // TAP complex // not recorded /// 0042825 // TAP complex // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0005215 // transporter activity // inferred from direct assay /// 0005215 // transporter activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0015197 // peptide transporter activity // inferred from electronic annotation /// 0015197 // peptide transporter activity // inferred from genetic interaction /// 0015197 // peptide transporter activity // traceable author statement /// 0015421 // oligopeptide-transporting ATPase activity // not recorded /// 0015433 // peptide antigen-transporting ATPase activity // inferred from mutant phenotype /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0042288 // MHC class I protein binding // not recorded /// 0042605 // peptide antigen binding // not recorded /// 0042626 // ATPase activity, coupled to transmembrane movement of substances // inferred from electronic annotation /// 0046978 // TAP1 binding // not recorded /// 0046978 // TAP1 binding // inferred from physical interaction /// 0046979 // TAP2 binding // not recorded /// 0046980 // tapasin binding // not recorded /// 0046980 // tapasin binding // inferred from sequence or structural similarity","chr6:32793047-32806547 (-) // 76.62 // p21.32"]
["11744559_a_at",-0.005335808,0.03756523,0.12814045,-0.013583183,-0.020412445,0.005335808,0.5768416,0.19110452,1.0446429,0.06300989,1.0446429,"up","SLC25A37",51312.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0055072 // iron ion homeostasis // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr8:23398982-23429734 (+) // 90.67 // p21.2"]
["11723074_x_at",-0.036934853,-0.027371407,0.019899368,0.0071983337,0.1269598,-0.0071983337,0.6569549,0.28224277,-1.0403885,-0.05712231,1.0403885,"down","BCL9L",283149.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0010718 // positive regulation of epithelial to mesenchymal transition // inferred from mutant phenotype /// 0022604 // regulation of cell morphogenesis // inferred from mutant phenotype /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // inferred from mutant phenotype /// 0035019 // somatic stem cell maintenance // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype","0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0003713 // transcription coactivator activity // non-traceable author statement /// 0008013 // beta-catenin binding // inferred from direct assay /// 0008013 // beta-catenin binding // inferred from electronic annotation","chr11:118729970-118781613 (-) // 98.06 // q23.3"]
["11744426_x_at",0.0287714,0.008475304,-0.0047130585,0.0047130585,-0.0064496994,-0.013414383,0.61057276,0.22464226,1.0110784,0.01589481,1.0110784,"up","KIAA0101",9768.0,"","0005634 // nucleus // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation","","chr15:64657212-64673650 (-) // 74.68 // q22.31"]
["11733111_a_at",0.13463593,0.060857773,-0.09553957,-0.028919697,-0.0796361,0.02891922,0.7814972,0.46810725,1.0423672,0.05986362,1.0423672,"up","TLK1",9874.0,"0001672 // regulation of chromatin assembly or disassembly // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006468 // protein phosphorylation // non-traceable author statement /// 0006886 // intracellular protein transport // inferred from direct assay /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // non-traceable author statement /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0005524 // ATP binding // non-traceable author statement /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr2:171847332-172017450 (-) // 94.05 // q31.1"]
["11753315_a_at",-0.043447018,-0.0055565834,0.005556822,0.080728054,0.019891262,-0.037965298,0.7377415,0.39719197,-1.0248175,-0.03536697,1.0248175,"down","CELF2",10659.0,"0006376 // mRNA splice site selection // inferred from electronic annotation /// 0006396 // RNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008016 // regulation of heart contraction // traceable author statement","0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement","chr10:11207418-11317373 (+) // 99.7 // p14"]
["11749547_a_at",-0.15661955,0.018014431,-0.11136389,0.07567549,-0.018014908,0.043641567,0.48927692,0.118675545,-1.0845454,-0.11709041,1.0845454,"down","TMEM129",92305.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr4:1718094-1722867 (-) // 91.3 // p16.3"]
["11718516_s_at",-0.03584671,-0.018377304,0.10274696,0.007663727,0.1725626,-0.007663727,0.8466804,0.5980126,-1.0290738,-0.041346498,1.0290738,"down","TAF9",6880.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006352 // transcription initiation, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006368 // transcription elongation from RNA polymerase II promoter // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred by curator /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030307 // positive regulation of cell growth // inferred from mutant phenotype /// 0032435 // negative regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043966 // histone H3 acetylation // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0060760 // positive regulation of response to cytokine stimulus // inferred from mutant phenotype /// 0070555 // response to interleukin-1 // inferred from mutant phenotype","0000125 // PCAF complex // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005669 // transcription factor TFIID complex // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0015030 // Cajal body // inferred from direct assay /// 0015030 // Cajal body // inferred from electronic annotation /// 0030914 // STAGA complex // inferred from direct assay /// 0033276 // transcription factor TFTC complex // inferred from direct assay /// 0070761 // pre-snoRNP complex // inferred from direct assay /// 0071339 // MLL1 complex // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0002039 // p53 binding // inferred from physical interaction /// 0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from mutant phenotype /// 0004017 // adenylate kinase activity // inferred from direct assay /// 0004017 // adenylate kinase activity // inferred from electronic annotation /// 0004402 // histone acetyltransferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0033613 // activating transcription factor binding // inferred from physical interaction /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0070742 // C2H2 zinc finger domain binding // inferred from physical interaction","chr5:68660569-68665840 (-) // 91.02 // q13.2"]
["11760781_at",-0.0012338161,-0.0486176,-0.12845302,0.0826695,0.011695623,0.0012338161,0.48031008,0.112821616,-1.0653305,-0.091301076,1.0653305,"down","DCAF5",8816.0,"0016567 // protein ubiquitination // inferred by curator /// 0016567 // protein ubiquitination // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0080008 // CUL4-RING ubiquitin ligase complex // inferred from direct assay","","chr14:69555923-69619700 (-) // 87.96 // q24.1"]
["11760739_at",0.024733543,-0.12667418,0.14650917,-0.25406432,0.03977394,-0.024733543,0.78392637,0.47191325,1.0677181,0.09453086,1.0677181,"up","LOC100289533",1.00289533E8,"","","","chr18:21977239-21981171 (+) // 86.54 // q11.2"]
["11755456_a_at",-0.006583214,0.0031251907,0.054937363,0.0023765564,-0.0023765564,-0.008993149,0.7117803,0.35697812,1.0140702,0.02015746,1.0140702,"up","AP2S1",1175.0,"0006810 // transport // non-traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0015031 // protein transport // non-traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016032 // viral reproduction // traceable author statement /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0030100 // regulation of endocytosis // traceable author statement /// 0042059 // negative regulation of epidermal growth factor receptor signaling pathway // traceable author statement /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048268 // clathrin coat assembly // traceable author statement /// 0050690 // regulation of defense response to virus by virus // traceable author statement","0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005905 // coated pit // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030117 // membrane coat // inferred from electronic annotation /// 0030122 // AP-2 adaptor complex // traceable author statement /// 0030122 // AP-2 adaptor complex // inferred from electronic annotation /// 0030666 // endocytic vesicle membrane // traceable author statement","0005215 // transporter activity // non-traceable author statement /// 0008565 // protein transporter activity // non-traceable author statement /// 0008565 // protein transporter activity // inferred from electronic annotation","chr19:47341574-47354045 (-) // 97.76 // q13.32"]
["11722311_a_at",0.023674011,-0.021142483,0.07674599,0.01503706,-0.015037537,-0.10041332,0.6318972,0.25110862,1.0423914,0.059897114,1.0423914,"up","COQ2",27235.0,"0006071 // glycerol metabolic process // inferred from genetic interaction /// 0006744 // ubiquinone biosynthetic process // inferred from direct assay /// 0006744 // ubiquinone biosynthetic process // inferred from electronic annotation /// 0008299 // isoprenoid biosynthetic process // inferred from electronic annotation /// 0009058 // biosynthetic process // inferred from electronic annotation","0005739 // mitochondrion // inferred from reviewed computational analysis /// 0005739 // mitochondrion // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from reviewed computational analysis /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation","0002083 // 4-hydroxybenzoate decaprenyltransferase activity // inferred from electronic annotation /// 0004659 // prenyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0047293 // 4-hydroxybenzoate nonaprenyltransferase activity // inferred from electronic annotation","chr4:84184976-84206067 (-) // 96.87 // q21.23"]
["11735097_x_at",0.0055770874,0.06626892,0.0650444,-0.08161545,-0.0177145,-0.0055770874,0.3846101,0.05974518,1.0574571,0.08059912,1.0574571,"up","MLX",6945.0,"0006112 // energy reserve metabolic process // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006913 // nucleocytoplasmic transport // inferred from electronic annotation /// 0031325 // positive regulation of cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0008134 // transcription factor binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from physical interaction","chr17:40719077-40725257 (+) // 97.79 // q21.2"]
["11759405_x_at",-0.034503937,-0.030025482,0.0033683777,0.04166603,0.027103424,-0.0033683777,0.42081732,0.07742459,-1.0296738,-0.042187385,1.0296738,"down","STX10",8677.0,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0042147 // retrograde transport, endosome to Golgi // inferred from direct assay /// 0048193 // Golgi vesicle transport // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0000139 // Golgi membrane // traceable author statement /// 0005622 // intracellular // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005484 // SNAP receptor activity // inferred from electronic annotation","chr19:13254875-13261188 (-) // 97.89 // p13.2"]
["11738713_x_at",0.027569056,0.17914534,-0.061641693,-0.027569056,0.03938389,-0.034400225,0.7940075,0.49280277,1.0394973,0.05588595,1.0394973,"up","OR52K2",119774.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr11:4470524-4471591 (+) // 100.0 // p15.4"]
["11730613_at",-0.012765884,-0.08332348,0.026198387,-0.1074357,0.012766361,0.017139912,0.9889018,0.96322185,1.0017664,0.0025461907,1.0017664,"up","MBOAT7",79143.0,"0006644 // phospholipid metabolic process // inferred from electronic annotation /// 0008654 // phospholipid biosynthetic process // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0016747 // transferase activity, transferring acyl groups other than amino-acyl groups // inferred from electronic annotation","chr19:54681993-54693733 (-) // 82.66 // q13.42"]
["11747132_at",0.0745492,0.009983063,-0.141438,-0.053411484,0.07488918,-0.009983063,0.924311,0.77417946,-1.0159293,-0.022800066,1.0159293,"down","","","","","","chr22:38820292-38823906 (+) // 83.5 // q13.1"]
["11751971_a_at",-0.04617262,-0.009061098,0.0028316975,0.23062277,0.028326273,-0.0028316975,0.6234553,0.24039142,-1.0738852,-0.102839775,1.0738852,"down","PAPPA2",60676.0,"0001558 // regulation of cell growth // non-traceable author statement /// 0006508 // proteolysis // inferred from direct assay /// 0006508 // proteolysis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005622 // intracellular // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from direct assay /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // non-traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:176432306-176660008 (+) // 93.33 // q25.2"]
["11731050_at",-0.120355606,0.045561314,-0.04556179,-0.067762375,0.07578373,0.18580961,0.66942775,0.29837275,-1.0752923,-0.10472895,1.0752923,"down","KIAA1377",57562.0,"","","0005515 // protein binding // inferred from physical interaction","chr11:101785745-101871793 (+) // 77.92 // q22.1"]
["11728743_a_at",0.06374073,0.016963005,-0.12602901,0.2631588,-0.016963005,-0.10458517,0.8670495,0.6435998,-1.0441377,-0.062312007,1.0441377,"down","ARAP3",64411.0,"0007010 // cytoskeleton organization // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0008360 // regulation of cell shape // inferred from sequence or structural similarity /// 0016192 // vesicle-mediated transport // traceable author statement /// 0030336 // negative regulation of cell migration // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // inferred from sequence or structural similarity /// 0032312 // regulation of ARF GTPase activity // inferred from electronic annotation /// 0032321 // positive regulation of Rho GTPase activity // inferred from sequence or structural similarity /// 0032321 // positive regulation of Rho GTPase activity // inferred from electronic annotation /// 0035021 // negative regulation of Rac protein signal transduction // inferred from electronic annotation /// 0035024 // negative regulation of Rho protein signal transduction // inferred from electronic annotation /// 0035024 // negative regulation of Rho protein signal transduction // inferred from sequence or structural similarity /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0001726 // ruffle // inferred from sequence or structural similarity /// 0001726 // ruffle // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred by curator /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from sequence or structural similarity /// 0030027 // lamellipodium // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005100 // Rho GTPase activator activity // inferred from electronic annotation /// 0005100 // Rho GTPase activator activity // inferred from sequence or structural similarity /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0005547 // phosphatidylinositol-3,4,5-trisphosphate binding // inferred from direct assay /// 0008060 // ARF GTPase activator activity // inferred from sequence or structural similarity /// 0008060 // ARF GTPase activator activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0030675 // Rac GTPase activator activity // inferred from sequence or structural similarity /// 0043325 // phosphatidylinositol-3,4-bisphosphate binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr5:141032844-141060409 (-) // 91.61 // q31.3"]
["11731477_at",-0.07968807,-0.051384926,-0.0033273697,0.024909973,0.030509949,0.0033273697,0.36933693,0.053671435,-1.0456374,-0.064382605,1.0456374,"down","CHMP1B",57132.0,"0006810 // transport // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031902 // late endosome membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from physical interaction","chr18:11850937-11854448 (+) // 91.22 // p11.21"]
["11721568_a_at",-0.0029764175,0.051989555,0.0040225983,0.0029764175,-0.025577545,-0.1727829,0.6068114,0.22080252,1.0590763,0.08280654,1.0590763,"up","C9orf3 /// LOC100507319","100507319 /// 84909","0006508 // proteolysis // inferred from direct assay /// 0006508 // proteolysis // inferred from electronic annotation /// 0019370 // leukotriene biosynthetic process // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0004177 // aminopeptidase activity // inferred from direct assay /// 0004177 // aminopeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from direct assay /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:97488714-97849500 (+) // 80.89 // q22.32"]
["11749336_a_at",-0.0017375946,0.02715683,0.01639843,-0.01009655,0.0017375946,-0.019075394,0.4413716,0.08987565,1.0161293,0.023083929,1.0161293,"up","MRPL47",57129.0,"0006412 // translation // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005761 // mitochondrial ribosome // inferred from electronic annotation /// 0005840 // ribosome // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003735 // structural constituent of ribosome // inferred from electronic annotation","chr3:179306256-179322416 (-) // 95.24 // q26.33"]
["11763741_x_at",-0.019973755,-0.02283287,0.0028877258,-0.002828598,0.002828598,0.025829315,0.51971185,0.14082317,-1.0153071,-0.021916121,1.0153071,"down","ACTR6",64431.0,"","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation","","chr12:100593642-100635625 (+) // 83.16 // q23.1"]
["11764061_s_at",-0.02111721,-0.05660534,-0.057135582,0.025143623,0.08799076,0.02111721,0.2667097,0.0221699,-1.0641513,-0.08970327,1.0641513,"down","NDUFB3",4709.0,"0006120 // mitochondrial electron transport, NADH to ubiquinone // non-traceable author statement /// 0006120 // mitochondrial electron transport, NADH to ubiquinone // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0022900 // electron transport chain // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005747 // mitochondrial respiratory chain complex I // inferred from direct assay /// 0005747 // mitochondrial respiratory chain complex I // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0070469 // respiratory chain // inferred from electronic annotation","0008137 // NADH dehydrogenase (ubiquinone) activity // non-traceable author statement /// 0008137 // NADH dehydrogenase (ubiquinone) activity // inferred from electronic annotation /// 0008137 // NADH dehydrogenase (ubiquinone) activity // traceable author statement","chr2:201950201-201950502 (+) // 68.8 // q33.1"]
["11763866_at",-0.0040421486,-0.10633087,0.088270664,0.1785481,0.0040421486,-0.054914713,0.8512936,0.6080238,-1.0352118,-0.049925968,1.0352118,"down","","","","","","chr14:36010306-36011764 (+) // 69.2 // q13.2"]
["11761020_at",0.023189306,0.4137776,-0.1635375,-0.027139187,0.092218876,-0.023189306,0.8840444,0.68119395,1.0549537,0.07717968,1.0549537,"up","RTCA",8634.0,"0006396 // RNA processing // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0003824 // catalytic activity // inferred from electronic annotation /// 0003963 // RNA-3'-phosphate cyclase activity // inferred from electronic annotation /// 0003963 // RNA-3'-phosphate cyclase activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation","chr1:100731713-100739511 (+) // 99.83 // p21.2"]
["11761587_x_at",0.2656603,-0.16952944,0.056681156,-0.056681633,0.20869827,-0.08202791,0.9570665,0.86839247,1.0193205,0.027607726,1.0193205,"up","PIGQ",9091.0,"0005975 // carbohydrate metabolic process // traceable author statement /// 0006501 // C-terminal protein lipidation // traceable author statement /// 0006506 // GPI anchor biosynthetic process // inferred from electronic annotation /// 0016254 // preassembly of GPI anchor in ER membrane // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0000506 // glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0017176 // phosphatidylinositol N-acetylglucosaminyltransferase activity // inferred from electronic annotation","chr16:622505-633095 (+) // 99.42 // p13.3"]
["11758365_s_at",-0.06409931,0.054528236,-0.079613686,-0.02741003,0.02741003,0.124014854,0.67875975,0.31061584,-1.050493,-0.07106655,1.050493,"down",-0.079613686,"TTLL8",164714.0,"0006464 // cellular protein modification process // inferred from electronic annotation /// 0018094 // protein polyglycylation // inferred from sequence or structural similarity","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005929 // cilium // inferred from sequence or structural similarity /// 0005929 // cilium // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from sequence or structural similarity /// 0035085 // cilium axoneme // inferred from sequence or structural similarity /// 0035085 // cilium axoneme // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0004835 // tubulin-tyrosine ligase activity // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0070735 // protein-glycine ligase activity // inferred from sequence or structural similarity /// 0070736 // protein-glycine ligase activity, initiating // inferred from sequence or structural similarity"]
["11726074_a_at",0.056766987,1.616478E-4,-1.616478E-4,0.04448366,-0.07455826,-0.087087154,0.6511876,0.27603278,1.0410044,0.057976194,1.0410044,"up","ARHGEF7",8874.0,"0006915 // apoptotic process // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0042059 // negative regulation of epidermal growth factor receptor signaling pathway // traceable author statement /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0043547 // positive regulation of GTPase activity // inferred from direct assay /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0001726 // ruffle // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005925 // focal adhesion // inferred from electronic annotation /// 0005938 // cell cortex // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043005 // neuron projection // inferred from direct assay /// 0043025 // neuronal cell body // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay","0005085 // guanyl-nucleotide exchange factor activity // inferred from direct assay /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction","chr13:111767623-111947542 (+) // 96.56 // q34"]
["11731738_a_at",-0.10169053,0.0049779415,-0.047497272,-0.00497818,0.048948526,0.21442533,0.5178732,0.13919997,-1.0974854,-0.13420178,1.0974854,"down","PGAP1",80055.0,"0006501 // C-terminal protein lipidation // traceable author statement /// 0006505 // GPI anchor metabolic process // inferred from electronic annotation /// 0006506 // GPI anchor biosynthetic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0007605 // sensory perception of sound // inferred from electronic annotation /// 0009880 // embryonic pattern specification // inferred from electronic annotation /// 0009948 // anterior/posterior axis specification // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0015798 // myo-inositol transport // inferred from sequence or structural similarity /// 0015798 // myo-inositol transport // inferred from electronic annotation /// 0016255 // attachment of GPI anchor to protein // traceable author statement /// 0021871 // forebrain regionalization // inferred from electronic annotation /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0060322 // head development // inferred from electronic annotation /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from sequence or structural similarity /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031227 // intrinsic to endoplasmic reticulum membrane // inferred from electronic annotation","0004518 // nuclease activity // inferred from sequence or structural similarity /// 0004518 // nuclease activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016788 // hydrolase activity, acting on ester bonds // inferred from electronic annotation /// 0042578 // phosphoric ester hydrolase activity // inferred from sequence or structural similarity /// 0042578 // phosphoric ester hydrolase activity // inferred from electronic annotation","chr2:197697727-197791454 (-) // 90.79 // q33.1"]
["11717444_at",0.013835907,0.0101594925,0.06625366,-0.0101594925,-0.101825714,-0.09683037,0.35073963,0.045863494,1.0715419,0.09968827,1.0715419,"up","BYSL",705.0,"0007155 // cell adhesion // traceable author statement /// 0007565 // female pregnancy // traceable author statement /// 0042254 // ribosome biogenesis // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr6:41888925-41901089 (+) // 90.77 // p21.1"]
["11757271_s_at",-0.08047962,0.008055687,0.07156658,-0.021367073,0.031022072,-0.008055687,0.9959061,0.98688006,-1.0005678,-8.189209E-4,1.0005678,"down","SNX6",58533.0,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from mutant phenotype /// 0006886 // intracellular protein transport // non-traceable author statement /// 0007154 // cell communication // inferred from electronic annotation /// 0007175 // negative regulation of epidermal growth factor-activated receptor activity // non-traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // inferred from direct assay /// 0042147 // retrograde transport, endosome to Golgi // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay","0005622 // intracellular // inferred from mutant phenotype /// 0005622 // intracellular // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from direct assay /// 0031901 // early endosome membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008289 // lipid binding // inferred from electronic annotation /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from physical interaction","chr14:35010055-35011226 (+) // 73.56 // q13.1 /// chr14:35030300-35031471 (-) // 73.56 // q13.1"]
["11718660_a_at",-0.003165245,9.765625E-4,-9.765625E-4,0.06225586,-0.0053987503,0.084365845,0.5312131,0.14956057,-1.0339235,-0.048129454,1.0339235,"down","NENF",29937.0,"0043410 // positive regulation of MAPK cascade // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation","0008083 // growth factor activity // inferred from electronic annotation /// 0020037 // heme binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:212606228-212619721 (+) // 78.79 // q32.3"]
["11743311_a_at",-0.009984016,-0.03278494,0.07589054,0.018518925,-0.048197746,0.009984016,0.882171,0.67635787,1.012278,0.017605493,1.012278,"up","PILRB",29990.0,"0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // traceable author statement /// 0007171 // activation of transmembrane receptor protein tyrosine kinase activity // non-traceable author statement","0005887 // integral to plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr7:99933709-99965444 (+) // 80.35 // q22.1"]
["11762887_a_at",-0.0033035278,0.0033040047,-0.021402836,0.03512287,-0.041328907,0.26755524,0.71982753,0.3689633,-1.0675107,-0.09425056,1.0675107,"down","DIO3OS /// MIR1247","100302145 /// 64150","","","","chr14:102023638-102026683 (-) // 95.74 // q32.31"]
["11724562_x_at",-0.052586555,-0.044924736,-0.0069742203,0.032999992,0.0069742203,0.03410244,0.27202502,0.02330446,-1.0421195,-0.059520725,1.0421195,"down","RHOF",54509.0,"0006184 // GTP catabolic process // non-traceable author statement /// 0007015 // actin filament organization // inferred from direct assay /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // non-traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // non-traceable author statement /// 0005525 // GTP binding // inferred from electronic annotation","chr12:122215659-122231600 (-) // 78.47 // q24.31"]
["11754288_a_at",-0.005004883,0.0050115585,0.042788506,-0.013007164,-0.091156006,0.005004883,0.6097318,0.22382139,1.033342,0.047317818,1.033342,"up","LMAN2L",81562.0,"0006457 // protein folding // non-traceable author statement /// 0006888 // ER to Golgi vesicle-mediated transport // traceable author statement /// 0015031 // protein transport // inferred from mutant phenotype","0000139 // Golgi membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030134 // ER to Golgi transport vesicle // non-traceable author statement","0005537 // mannose binding // traceable author statement /// 0030246 // carbohydrate binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:97371665-97405809 (-) // 95.48 // q11.2"]
["11725434_a_at",0.1801548,-0.022880554,-0.059973717,0.022880077,0.06776905,-0.04205942,0.9506922,0.8511866,1.0113182,0.016237006,1.0113182,"up","RUNDC3A",10900.0,"0007264 // small GTPase mediated signal transduction // traceable author statement","","0005083 // small GTPase regulator activity // traceable author statement","chr17:42384755-42396023 (+) // 84.41 // q21.31"]
["11734233_at",0.069236755,0.10102272,-0.15654564,0.0927906,-0.069236755,-0.12285519,0.9072413,0.73503846,1.026456,0.037671782,1.026456,"up","C14orf176",643382.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr14:21567095-21571882 (+) // 92.68 // q11.2"]
["11749251_a_at",0.040317535,-0.040317535,0.054601192,-0.050563812,-0.12043905,0.047962666,0.71264094,0.3582177,1.0418978,0.05921373,1.0418978,"up","REXO4",57109.0,"0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004527 // exonuclease activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr9:136271757-136283130 (-) // 99.6 // q34.2"]
["11759531_x_at",-0.18609166,0.0034930706,-0.0034928322,0.2613759,-0.024717093,0.086360216,0.5624708,0.17759365,-1.1248273,-0.16970347,1.1248273,"down","NUDT22",84304.0,"","","0016787 // hydrolase activity // inferred from electronic annotation","chr11:63997013-64001752 (+) // 98.79 // q13.1"]
["11749156_x_at",-0.034395218,0.0054388046,-0.0054388046,0.06990337,-0.037115097,0.05284691,0.6856754,0.319897,-1.028121,-0.040010057,1.028121,"down","ORC3",23595.0,"0000075 // cell cycle checkpoint // traceable author statement /// 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000084 // S phase of mitotic cell cycle // traceable author statement /// 0000216 // M/G1 transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006260 // DNA replication // traceable author statement /// 0006260 // DNA replication // inferred from electronic annotation","0000808 // origin recognition complex // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005664 // nuclear origin of replication recognition complex // inferred from direct assay /// 0005664 // nuclear origin of replication recognition complex // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003688 // DNA replication origin binding // traceable author statement","chr6:88299853-88376885 (+) // 97.86 // q15"]
["11745516_a_at",0.17121887,-0.005109787,0.06177616,-0.012033939,-0.08747864,0.005109787,0.52019334,0.14139582,1.077307,0.107429415,1.077307,"up","STX16",8675.0,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006891 // intra-Golgi vesicle-mediated transport // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0042147 // retrograde transport, endosome to Golgi // inferred from direct assay","0000139 // Golgi membrane // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005792 // microsome // traceable author statement /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005794 // Golgi apparatus // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031201 // SNARE complex // traceable author statement","0005484 // SNAP receptor activity // inferred from direct assay /// 0005484 // SNAP receptor activity // inferred from electronic annotation /// 0005484 // SNAP receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr20:57226308-57251581 (+) // 95.58 // q13.32"]
["11749173_a_at",-0.0014505386,0.0014505386,-0.020548344,0.040731907,-0.13968325,0.02059269,0.9152616,0.75434047,1.0134466,0.019270029,1.0134466,"up","PPP2R5D",5528.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement","0000159 // protein phosphatase type 2A complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008601 // protein phosphatase type 2A regulator activity // inferred from electronic annotation /// 0008601 // protein phosphatase type 2A regulator activity // traceable author statement","chr6:42952281-42979142 (+) // 94.35 // p21.1"]
["11743670_s_at",0.018379688,-0.16062307,0.069980145,0.03064394,-0.018379688,-0.04271555,0.95321304,0.85813123,-1.0097075,-0.013937352,1.0097075,"down","ZNF292",23036.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:87865266-87973914 (+) // 98.71 // q14.3"]
["11739617_x_at",-0.012383461,0.010498047,0.062130928,-0.015500069,0.051639557,-0.010498047,0.9036091,0.7274919,1.0080273,0.011534733,1.0080273,"up","CD44",960.0,"0007155 // cell adhesion // inferred from electronic annotation /// 0007160 // cell-matrix adhesion // non-traceable author statement /// 0016337 // cell-cell adhesion // non-traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0030214 // hyaluronan catabolic process // inferred from direct assay /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from direct assay /// 0034116 // positive regulation of heterotypic cell-cell adhesion // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from mutant phenotype /// 0043518 // negative regulation of DNA damage response, signal transduction by p53 class mediator // inferred from direct assay /// 0044344 // cellular response to fibroblast growth factor stimulus // inferred from direct assay /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0051216 // cartilage development // inferred from expression pattern /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from direct assay /// 0070487 // monocyte aggregation // inferred from mutant phenotype /// 1900625 // positive regulation of monocyte aggregation // inferred from mutant phenotype","0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004415 // hyalurononglucosaminidase activity // inferred from direct assay /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005518 // collagen binding // non-traceable author statement /// 0005540 // hyaluronic acid binding // inferred from direct assay /// 0005540 // hyaluronic acid binding // inferred from electronic annotation /// 0005540 // hyaluronic acid binding // non-traceable author statement","chr11:35160416-35253948 (+) // 97.54 // p13"]
["11723796_a_at",0.06935692,0.009570599,0.057018757,-0.04147768,-0.009571075,-0.016229153,0.30076388,0.030501217,1.0480746,0.06774141,1.0480746,"up","SFMBT1",51460.0,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","","chr3:52938170-53079301 (-) // 97.73 // p21.1"]
["11716309_a_at",-0.007659912,-0.26290274,0.21092129,0.20972204,-0.046470642,0.007659912,0.87047976,0.6512414,-1.0547132,-0.07685082,1.0547132,"down","CYBRD1",79901.0,"0006879 // cellular iron ion homeostasis // traceable author statement /// 0010039 // response to iron ion // inferred from electronic annotation /// 0022900 // electron transport chain // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031526 // brush border membrane // inferred from electronic annotation","0000293 // ferric-chelate reductase activity // inferred from direct assay /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016722 // oxidoreductase activity, oxidizing metal ions // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:172378742-172414639 (+) // 89.4 // q31.1"]
["11742561_at",-0.093798876,0.061356068,-0.061356068,-0.19965172,0.06875014,0.09504199,0.95530236,0.8634564,-1.0134768,-0.019313132,1.0134768,"down","OR2G2",81470.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr1:247751661-247752615 (+) // 93.5 // q44"]
["11746718_at",-0.03142214,0.09077978,0.22166872,-0.1149044,-0.027243137,0.027243137,0.57693064,0.19120201,1.0957942,0.13197687,1.0957942,"up","KDM4C",23081.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0016568 // chromatin modification // inferred from electronic annotation /// 0033169 // histone H3-K9 demethylation // inferred from direct assay /// 0033169 // histone H3-K9 demethylation // inferred from mutant phenotype /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0000790 // nuclear chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016702 // oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from electronic annotation /// 0032454 // histone demethylase activity (H3-K9 specific) // inferred from direct assay /// 0032454 // histone demethylase activity (H3-K9 specific) // inferred from mutant phenotype /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050681 // androgen receptor binding // inferred from physical interaction /// 0050681 // androgen receptor binding // inferred from electronic annotation","chr9:6720862-7077263 (+) // 96.93 // p24.1"]
["11750779_a_at",-0.20544958,0.23664236,-0.11552191,-0.02002287,0.02002287,0.2578087,0.80688787,0.5162478,-1.082259,-0.11404587,1.082259,"down","SLC2A5",6518.0,"0005975 // carbohydrate metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0008643 // carbohydrate transport // inferred from electronic annotation /// 0008645 // hexose transport // traceable author statement /// 0015755 // fructose transport // traceable author statement /// 0015755 // fructose transport // inferred from electronic annotation /// 0015758 // glucose transport // traceable author statement /// 0015758 // glucose transport // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation /// 0005353 // fructose transmembrane transporter activity // inferred from electronic annotation /// 0005353 // fructose transmembrane transporter activity // traceable author statement /// 0005355 // glucose transmembrane transporter activity // inferred from electronic annotation /// 0005355 // glucose transmembrane transporter activity // traceable author statement /// 0022857 // transmembrane transporter activity // inferred from electronic annotation /// 0022891 // substrate-specific transmembrane transporter activity // inferred from electronic annotation","chr1:9097171-9145204 (-) // 94.34 // p36.23"]
["11727209_a_at",0.03885269,0.0399971,0.14498329,-0.0695858,-0.03885269,-0.07666206,0.2639582,0.021224078,1.0990913,0.13631122,1.0990913,"up","GLRX2",51022.0,"0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006467 // protein thiol-disulfide exchange // traceable author statement /// 0006749 // glutathione metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006915 // apoptotic process // non-traceable author statement /// 0009266 // response to temperature stimulus // non-traceable author statement /// 0009966 // regulation of signal transduction // non-traceable author statement /// 0010033 // response to organic substance // inferred from direct assay /// 0022900 // electron transport chain // inferred from electronic annotation /// 0030154 // cell differentiation // non-traceable author statement /// 0042262 // DNA protection // non-traceable author statement /// 0042542 // response to hydrogen peroxide // inferred from direct assay /// 0045454 // cell redox homeostasis // traceable author statement /// 0045454 // cell redox homeostasis // inferred from electronic annotation /// 0051775 // response to redox state // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation","0008794 // arsenate reductase (glutaredoxin) activity // traceable author statement /// 0009055 // electron carrier activity // non-traceable author statement /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0015035 // protein disulfide oxidoreductase activity // inferred from electronic annotation /// 0015038 // glutathione disulfide oxidoreductase activity // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation /// 0051537 // 2 iron, 2 sulfur cluster binding // inferred from electronic annotation","chr1:193065600-193075244 (-) // 95.82 // q31.2"]
["11733228_at",0.0,0.0,-0.18530369,0.24500275,-0.1250968,0.093091965,0.70319146,0.34427127,-1.0963947,-0.1327672,1.0963947,"down","DNMT3L",29947.0,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0006306 // DNA methylation // non-traceable author statement /// 0006349 // regulation of gene expression by genetic imprinting // non-traceable author statement /// 0007283 // spermatogenesis // non-traceable author statement /// 0043085 // positive regulation of catalytic activity // inferred from direct assay /// 0043085 // positive regulation of catalytic activity // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay","0000794 // condensed nuclear chromosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005720 // nuclear heterochromatin // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008047 // enzyme activator activity // inferred from direct assay /// 0008047 // enzyme activator activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr21:45666222-45682099 (-) // 90.49 // q22.3"]
["11718654_s_at",-0.007349968,0.007349968,0.1625061,-0.014355183,-0.032624245,0.009754658,0.6690992,0.2980231,1.047229,0.066577025,1.047229,"up","PKD2",5311.0,"0001658 // branching involved in ureteric bud morphogenesis // inferred from expression pattern /// 0001822 // kidney development // inferred from electronic annotation /// 0001889 // liver development // inferred from expression pattern /// 0001892 // embryonic placenta development // inferred from sequence or structural similarity /// 0001892 // embryonic placenta development // inferred from electronic annotation /// 0003127 // detection of nodal flow // inferred from sequence or structural similarity /// 0003127 // detection of nodal flow // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from sequence or structural similarity /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0006874 // cellular calcium ion homeostasis // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from sequence or structural similarity /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0007259 // JAK-STAT cascade // inferred from sequence or structural similarity /// 0007259 // JAK-STAT cascade // inferred from electronic annotation /// 0007368 // determination of left/right symmetry // inferred from sequence or structural similarity /// 0007368 // determination of left/right symmetry // inferred from electronic annotation /// 0007507 // heart development // inferred from expression pattern /// 0007507 // heart development // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // non-traceable author statement /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0021510 // spinal cord development // inferred from expression pattern /// 0021915 // neural tube development // inferred from expression pattern /// 0030814 // regulation of cAMP metabolic process // inferred from sequence or structural similarity /// 0030814 // regulation of cAMP metabolic process // inferred from electronic annotation /// 0031587 // positive regulation of inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity // inferred from mutant phenotype /// 0031659 // positive regulation of cyclin-dependent protein kinase activity involved in G1/S // inferred from direct assay /// 0034614 // cellular response to reactive oxygen species // non-traceable author statement /// 0035502 // metanephric ureteric bud development // inferred from expression pattern /// 0035725 // sodium ion transmembrane transport // inferred from direct assay /// 0035904 // aorta development // inferred from expression pattern /// 0042127 // regulation of cell proliferation // inferred from mutant phenotype /// 0042994 // cytoplasmic sequestering of transcription factor // inferred from mutant phenotype /// 0045429 // positive regulation of nitric oxide biosynthetic process // inferred from mutant phenotype /// 0045429 // positive regulation of nitric oxide biosynthetic process // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0050982 // detection of mechanical stimulus // inferred from sequence or structural similarity /// 0050982 // detection of mechanical stimulus // inferred from electronic annotation /// 0051209 // release of sequestered calcium ion into cytosol // inferred from direct assay /// 0051209 // release of sequestered calcium ion into cytosol // inferred from mutant phenotype /// 0051209 // release of sequestered calcium ion into cytosol // inferred from electronic annotation /// 0051298 // centrosome duplication // non-traceable author statement /// 0051925 // regulation of calcium ion transport via voltage-gated calcium channel activity // inferred from direct assay /// 0060315 // negative regulation of ryanodine-sensitive calcium-release channel activity // inferred from sequence or structural similarity /// 0060315 // negative regulation of ryanodine-sensitive calcium-release channel activity // inferred from electronic annotation /// 0060674 // placenta blood vessel development // inferred from sequence or structural similarity /// 0060674 // placenta blood vessel development // inferred from electronic annotation /// 0061333 // renal tubule morphogenesis // inferred from sequence or structural similarity /// 0061333 // renal tubule morphogenesis // inferred from electronic annotation /// 0061371 // determination of heart left/right asymmetry // inferred from mutant phenotype /// 0061441 // renal artery morphogenesis // inferred from expression pattern /// 0070588 // calcium ion transmembrane transport // inferred from direct assay /// 0070588 // calcium ion transmembrane transport // inferred from electronic annotation /// 0071158 // positive regulation of cell cycle arrest // inferred from mutant phenotype /// 0071464 // cellular response to hydrostatic pressure // inferred from direct assay /// 0071470 // cellular response to osmotic stress // inferred from direct assay /// 0071498 // cellular response to fluid shear stress // inferred from mutant phenotype /// 0071498 // cellular response to fluid shear stress // inferred from electronic annotation /// 0071805 // potassium ion transmembrane transport // inferred from sequence or structural similarity /// 0071805 // potassium ion transmembrane transport // inferred from electronic annotation /// 0072075 // metanephric mesenchyme development // inferred from expression pattern /// 0072164 // mesonephric tubule development // inferred from expression pattern /// 0072177 // mesonephric duct development // inferred from expression pattern /// 0072208 // metanephric smooth muscle tissue development // inferred from expression pattern /// 0072214 // metanephric cortex development // inferred from expression pattern /// 0072218 // metanephric ascending thin limb development // inferred from expression pattern /// 0072219 // metanephric cortical collecting duct development // inferred from expression pattern /// 0072235 // metanephric distal tubule development // inferred from expression pattern /// 0072284 // metanephric S-shaped body morphogenesis // inferred from expression pattern /// 0090279 // regulation of calcium ion import // inferred from direct assay /// 2000134 // negative regulation of G1/S transition of mitotic cell cycle // inferred from mutant phenotype","0002133 // polycystin complex // inferred from sequence or structural similarity /// 0002133 // polycystin complex // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from mutant phenotype /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from mutant phenotype /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0005911 // cell-cell junction // inferred from sequence or structural similarity /// 0005911 // cell-cell junction // inferred from electronic annotation /// 0005929 // cilium // inferred from sequence or structural similarity /// 0005929 // cilium // inferred from electronic annotation /// 0005932 // microtubule basal body // inferred from direct assay /// 0009925 // basal plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from direct assay /// 0031512 // motile primary cilium // inferred from sequence or structural similarity /// 0031512 // motile primary cilium // inferred from electronic annotation /// 0031513 // nonmotile primary cilium // inferred from sequence or structural similarity /// 0031513 // nonmotile primary cilium // inferred from electronic annotation /// 0031941 // filamentous actin // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation /// 0044441 // cilium part // inferred from electronic annotation /// 0045180 // basal cortex // inferred from direct assay /// 0045180 // basal cortex // inferred from electronic annotation /// 0071458 // integral to cytosolic side of endoplasmic reticulum membrane // inferred from direct assay /// 0071556 // integral to lumenal side of endoplasmic reticulum membrane // inferred from direct assay /// 0072686 // mitotic spindle // inferred from direct assay /// 0072686 // mitotic spindle // inferred from electronic annotation","0005102 // receptor binding // inferred from physical interaction /// 0005102 // receptor binding // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from direct assay /// 0005245 // voltage-gated calcium channel activity // inferred from direct assay /// 0005248 // voltage-gated sodium channel activity // inferred from direct assay /// 0005262 // calcium channel activity // inferred from electronic annotation /// 0005267 // potassium channel activity // inferred from sequence or structural similarity /// 0005267 // potassium channel activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from sequence or structural similarity /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008092 // cytoskeletal protein binding // inferred from direct assay /// 0015267 // channel activity // inferred from electronic annotation /// 0022843 // voltage-gated cation channel activity // inferred from direct assay /// 0042802 // identical protein binding // inferred from sequence or structural similarity /// 0042802 // identical protein binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0042805 // actinin binding // inferred from direct assay /// 0043398 // HLH domain binding // inferred from physical interaction /// 0044325 // ion channel binding // inferred from physical interaction /// 0048763 // calcium-induced calcium release activity // inferred from direct assay /// 0051117 // ATPase binding // inferred from sequence or structural similarity /// 0051117 // ATPase binding // inferred from electronic annotation","chr4:88928798-88998929 (+) // 94.46 // q22.1"]
["11718584_a_at",-0.033738136,-0.03928423,-0.028521538,0.040608406,0.05212021,0.028521061,0.082850434,5.803472E-4,-1.0528241,-0.074264474,1.0528241,"down","SAP30BP",29115.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0045111 // intermediate filament cytoskeleton // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr17:73663195-73704139 (+) // 86.96 // q25.1"]
["11726943_at",-0.033887148,-0.08837366,0.16001296,0.042083263,0.03388691,-0.042966843,0.99544376,0.9851785,1.0010978,0.0015829195,1.0010978,"up","ZKSCAN2",342357.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016032 // viral reproduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:25247323-25268880 (-) // 89.18 // p12.1"]
["11730034_at",-0.0036492348,0.069672346,-0.31087136,0.094753265,-0.016558647,0.0036492348,0.7529205,0.42073312,-1.0784037,-0.108897366,1.0784037,"down","CDHR2",54825.0,"0007155 // cell adhesion // inferred from direct assay /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from electronic annotation /// 0030308 // negative regulation of cell growth // inferred from direct assay","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr5:175969511-176022975 (+) // 98.47 // q35.2"]
["11735046_at",-0.106978655,-0.098747015,0.05164218,0.03132367,-0.03132367,0.081638575,0.6449493,0.2674296,-1.0559738,-0.078573994,1.0559738,"down","ATP6V0D2",245972.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0015991 // ATP hydrolysis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport // inferred from electronic annotation /// 0033572 // transferrin transport // traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0010008 // endosome membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016324 // apical plasma membrane // inferred from direct assay /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0016471 // vacuolar proton-transporting V-type ATPase complex // inferred from direct assay /// 0033177 // proton-transporting two-sector ATPase complex, proton-transporting domain // inferred from electronic annotation /// 0033179 // proton-transporting V-type ATPase, V0 domain // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0015078 // hydrogen ion transmembrane transporter activity // inferred from electronic annotation","chr8:87111065-87166457 (+) // 70.76 // q21.3"]
["11742522_at",-0.01316452,0.15151024,0.08205533,-0.009959698,-0.1356101,0.009959459,0.5267349,0.14652558,1.0857338,0.11867039,1.0857338,"up","OR5T3",390154.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr11:56019675-56020698 (+) // 100.0 // q12.1"]
["11738198_at",0.06347084,0.14587116,0.0016367435,-0.0016367435,-0.10049772,-0.067025185,0.40177548,0.067431495,1.0918032,0.12671281,1.0918032,"up","PDE6B",5158.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0007601 // visual perception // inferred from electronic annotation /// 0007601 // visual perception // traceable author statement /// 0007603 // phototransduction, visible light // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0009583 // detection of light stimulus // inferred from electronic annotation /// 0046037 // GMP metabolic process // inferred from mutant phenotype /// 0050896 // response to stimulus // inferred from electronic annotation /// 0051480 // cytosolic calcium ion homeostasis // inferred from mutant phenotype /// 0060041 // retina development in camera-type eye // inferred from electronic annotation","0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004114 // 3',5'-cyclic-nucleotide phosphodiesterase activity // inferred from electronic annotation /// 0008081 // phosphoric diester hydrolase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047555 // 3',5'-cyclic-GMP phosphodiesterase activity // inferred from mutant phenotype /// 0047555 // 3',5'-cyclic-GMP phosphodiesterase activity // inferred from electronic annotation","chr4:646965-664680 (+) // 88.51 // p16.3"]
["11737809_at",0.0,0.04421401,-0.14123416,-0.06306052,0.35138988,0.0,0.7474587,0.41243145,-1.0931185,-0.12844987,1.0931185,"down","KCNH7",90134.0,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007623 // circadian rhythm // inferred from electronic annotation /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0051291 // protein heterooligomerization // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0071805 // potassium ion transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005242 // inward rectifier potassium channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005249 // voltage-gated potassium channel activity // inferred from electronic annotation /// 0005267 // potassium channel activity // inferred from electronic annotation","chr2:163227916-163695390 (-) // 97.44 // q24.2"]
["11749712_a_at",-0.05218458,-0.010032177,0.20716095,0.010032177,-0.105314255,0.013847828,0.7673541,0.44596058,1.0536965,0.0754594,1.0536965,"up","PDE1B",5153.0,"0001505 // regulation of neurotransmitter levels // inferred from electronic annotation /// 0001975 // response to amphetamine // inferred from electronic annotation /// 0006198 // cAMP catabolic process // inferred from direct assay /// 0006198 // cAMP catabolic process // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007202 // activation of phospholipase C activity // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008542 // visual learning // inferred from electronic annotation /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0030224 // monocyte differentiation // inferred from expression pattern /// 0036006 // cellular response to macrophage colony-stimulating factor stimulus // inferred from direct assay /// 0042053 // regulation of dopamine metabolic process // inferred from electronic annotation /// 0042428 // serotonin metabolic process // inferred from electronic annotation /// 0046069 // cGMP catabolic process // inferred from direct assay /// 0046069 // cGMP catabolic process // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0097011 // cellular response to granulocyte macrophage colony-stimulating factor stimulus // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0043025 // neuronal cell body // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004112 // cyclic-nucleotide phosphodiesterase activity // inferred from electronic annotation /// 0004114 // 3',5'-cyclic-nucleotide phosphodiesterase activity // inferred from electronic annotation /// 0004115 // 3',5'-cyclic-AMP phosphodiesterase activity // inferred from electronic annotation /// 0004117 // calmodulin-dependent cyclic-nucleotide phosphodiesterase activity // traceable author statement /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0008081 // phosphoric diester hydrolase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0048101 // calcium- and calmodulin-regulated 3',5'-cyclic-GMP phosphodiesterase activity // inferred from electronic annotation","chr12:54943384-54972044 (+) // 97.72 // q13.2"]
["11759500_at",0.07091904,0.11022282,0.1405487,-0.100361824,-0.0809412,-0.07091904,0.08833107,9.5135404E-4,1.1417954,0.19130415,1.1417954,"up","TNPO3",23534.0,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0035048 // splicing factor protein import into nucleus // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0004872 // receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr7:128594235-128695245 (-) // 95.83 // q32.1"]
["11760714_at",-0.05657792,-0.11149645,-0.06070757,0.14033532,0.05657792,0.063583374,0.17633295,0.007090766,-1.1196849,-0.16309284,1.1196849,"down","","","","","","chr9:32463819-32464974 (+) // 64.12 // p21.1"]
["11762213_x_at",-0.030815125,-0.06097603,0.030815125,0.03599882,-0.12493634,0.12900019,0.88795346,0.6915952,-1.0236195,-0.033679582,1.0236195,"down","","","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:20959109-20977395 (+) // 59.39 // p12"]
["11762572_x_at",-0.30054379,-0.0289042,-0.3276744,0.028904438,0.07509184,0.045173407,0.35854292,0.0493315,-1.2047752,-0.268764,1.2047752,"down","MTHFD2L",441024.0,"0000105 // histidine biosynthetic process // inferred from electronic annotation /// 0006164 // purine nucleotide biosynthetic process // inferred from electronic annotation /// 0006730 // one-carbon metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008652 // cellular amino acid biosynthetic process // inferred from electronic annotation /// 0009086 // methionine biosynthetic process // inferred from electronic annotation /// 0009396 // folic acid-containing compound biosynthetic process // inferred from electronic annotation /// 0035999 // tetrahydrofolate interconversion // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004477 // methenyltetrahydrofolate cyclohydrolase activity // inferred from electronic annotation /// 0004487 // methylenetetrahydrofolate dehydrogenase (NAD+) activity // inferred from electronic annotation /// 0004488 // methylenetetrahydrofolate dehydrogenase (NADP+) activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr4:75023824-75049177 (+) // 44.21 // q13.3"]
["11730477_at",-0.05868125,0.15979838,-0.0029087067,0.0,0.0,0.16706395,0.9342806,0.8027616,-1.0160363,-0.022951907,1.0160363,"down","RNF125",54941.0,"0016567 // protein ubiquitination // inferred from electronic annotation /// 0032480 // negative regulation of type I interferon production // traceable author statement /// 0045087 // innate immune response // traceable author statement","0005622 // intracellular // inferred from electronic annotation","0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr18:29598334-29653159 (+) // 70.09 // q12.1"]
["11753298_x_at",0.002398491,-0.0034890175,0.02171421,0.037005424,-0.002398491,-0.08285332,0.82879996,0.55920917,1.0160396,0.022956645,1.0160396,"up","BIRC7",79444.0,"0006309 // apoptotic DNA fragmentation // non-traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from mutant phenotype /// 0006916 // anti-apoptosis // non-traceable author statement /// 0007257 // activation of JUN kinase activity // non-traceable author statement /// 0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from direct assay /// 0042127 // regulation of cell proliferation // inferred from direct assay /// 0070247 // regulation of natural killer cell apoptotic process // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation","0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0004869 // cysteine-type endopeptidase inhibitor activity // traceable author statement /// 0004869 // cysteine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0019899 // enzyme binding // non-traceable author statement /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr20:61867448-61870957 (+) // 99.8 // q13.33"]
["11749396_s_at",0.011752605,-0.0055594444,-0.011752605,0.09357548,0.0055594444,-0.05370426,0.89879674,0.715051,-1.0118508,-0.016996624,1.0118508,"down","DEXI /// LOC100289656","100289656 /// 28955","","","","chr15:29033388-29034538 (+) // 100.0 // q13.1 /// chr15:23157963-23159115 (-) // 98.77 // q11.2"]
["11759015_at",0.03775549,0.050047398,-0.05241537,-0.037755966,-0.07873106,0.19319725,0.963313,0.8865181,-1.0095932,-0.013774168,1.0095932,"down","SPECC1",92521.0,"","0005634 // nucleus // inferred from electronic annotation","","chr17:20059301-20142743 (+) // 83.91 // p11.2"]
["11759693_at",0.07323837,0.17257738,-0.07323861,0.14231777,-0.10218477,-0.11917353,0.7930979,0.49048597,1.0598592,0.08387256,1.0598592,"up","RTKN2",219790.0,"0007165 // signal transduction // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0030097 // hemopoiesis // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation","0005543 // phospholipid binding // inferred from electronic annotation","chr10:63997910-64028622 (-) // 93.69 // q21.2"]
["11733500_a_at",0.05798912,-0.052204132,-0.147645,-0.09799147,0.14647341,0.052204132,0.76007193,0.43243855,-1.0576401,-0.080848746,1.0576401,"down","ZBTB25",7597.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0010467 // gene expression // inferred from expression pattern","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr14:64952744-64970563 (-) // 88.6 // q23.3"]
["11742310_at",-0.062675714,-0.11292553,0.03584361,0.10820222,0.044088364,-0.03584361,0.61587447,0.230116,-1.060983,-0.08540146,1.060983,"down","OR1I1",126370.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr19:15197790-15199032 (+) // 84.54 // p13.12"]
["11721500_at",-0.09609699,-0.058111668,0.16613531,0.062646866,0.058111668,-0.12668657,0.98695356,0.9566426,1.0041338,0.0059515494,1.0041338,"up","SWAP70",23075.0,"0016444 // somatic cell DNA recombination // inferred from electronic annotation /// 0045190 // isotype switching // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation","chr11:9685623-9774501 (+) // 91.53 // p15.4"]
["11754731_a_at",0.02183342,-0.02183342,0.04657936,-0.0317955,0.026742935,-0.052015305,0.69096786,0.32677543,1.0242367,0.03454913,1.0242367,"up","MTA3",57504.0,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:42929417-42936352 (+) // 72.71 // p21"]
["11740357_a_at",0.11924648,0.097931385,-0.07771492,-0.2400384,-0.28979468,0.07771492,0.5925403,0.20652887,1.1464661,0.19719374,1.1464661,"up","MLPH",79083.0,"0006605 // protein targeting // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0030318 // melanocyte differentiation // inferred from electronic annotation /// 0032400 // melanosome localization // inferred from electronic annotation /// 0043473 // pigmentation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0017022 // myosin binding // inferred from electronic annotation /// 0017137 // Rab GTPase binding // inferred from electronic annotation /// 0031489 // myosin V binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051010 // microtubule plus-end binding // inferred from electronic annotation","chr2:238395877-238463960 (+) // 88.92 // q37.3"]
["11738278_x_at",-0.040646553,-0.051062822,-0.25219417,0.072873354,0.04064679,0.41002607,0.46148896,0.101926684,-1.2219201,-0.28915,1.2219201,"down","TRIM34 /// TRIM6-TRIM34","445372 /// 53840","0070206 // protein trimerization // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:5653339-5662524 (+) // 98.48 // p15.4"]
["11731191_at",-0.101018906,0.02089405,-0.02089405,0.036898136,-0.048069,0.122458935,0.67752177,0.3094782,-1.0502764,-0.07076905,1.0502764,"down","KIAA2022",340533.0,"0000084 // S phase of mitotic cell cycle // not recorded /// 0006287 // base-excision repair, gap-filling // not recorded /// 0006297 // nucleotide-excision repair, DNA gap filling // not recorded /// 0007346 // regulation of mitotic cell cycle // not recorded /// 0019985 // translesion synthesis // not recorded /// 0043137 // DNA replication, removal of RNA primer // not recorded /// 0045004 // DNA replication proofreading // not recorded","0005634 // nucleus // not recorded /// 0043625 // delta DNA polymerase complex // not recorded","0003887 // DNA-directed DNA polymerase activity // not recorded /// 0008408 // 3'-5' exonuclease activity // not recorded","chrX:73952683-74145287 (-) // 93.04 // q13.3"]
["11763777_at",0.31257224,-0.012430191,-0.059189558,0.043970346,0.012430191,-0.038728237,0.8320926,0.5667394,1.0529425,0.07442667,1.0529425,"up","C1orf38",9473.0,"0006954 // inflammatory response // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement","","","chr1:28210660-28212420 (+) // 64.54 // p35.3"]
["11719261_s_at",0.0141506195,0.0715456,0.0141506195,-0.0141506195,-0.042702675,-0.025813103,0.34239227,0.043334123,1.0430713,0.060837734,1.0430713,"up","LMNA",4000.0,"0006915 // apoptotic process // traceable author statement /// 0006921 // cellular component disassembly involved in apoptotic process // traceable author statement /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0006997 // nucleus organization // inferred from electronic annotation /// 0006998 // nuclear envelope organization // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0007517 // muscle organ development // inferred from mutant phenotype /// 0030334 // regulation of cell migration // inferred from sequence or structural similarity /// 0030334 // regulation of cell migration // inferred from electronic annotation /// 0030951 // establishment or maintenance of microtubule cytoskeleton polarity // inferred from sequence or structural similarity /// 0030951 // establishment or maintenance of microtubule cytoskeleton polarity // inferred from electronic annotation /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0034504 // protein localization to nucleus // inferred from sequence or structural similarity /// 0034504 // protein localization to nucleus // inferred from electronic annotation /// 0035105 // sterol regulatory element binding protein import into nucleus // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from sequence or structural similarity /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0055015 // ventricular cardiac muscle cell development // inferred from electronic annotation /// 0071456 // cellular response to hypoxia // inferred from expression pattern /// 0090343 // positive regulation of cell aging // inferred from direct assay","0005626 // insoluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from direct assay /// 0005635 // nuclear envelope // traceable author statement /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005638 // lamin filament // inferred from electronic annotation /// 0005638 // lamin filament // traceable author statement /// 0005652 // nuclear lamina // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005882 // intermediate filament // inferred from electronic annotation /// 0005882 // intermediate filament // traceable author statement /// 0016363 // nuclear matrix // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0005198 // structural molecule activity // inferred from electronic annotation /// 0005198 // structural molecule activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr1:156052368-156109878 (+) // 78.66 // q22"]
["11758910_at",0.049468994,0.08232689,-0.04143715,-0.04071188,-0.04009819,0.04009819,0.73474985,0.3933725,1.0307469,0.043690175,1.0307469,"up","RTKN",6242.0,"0006915 // apoptotic process // inferred from electronic annotation /// 0007165 // signal transduction // inferred from direct assay /// 0007165 // signal transduction // inferred from electronic annotation /// 0007266 // Rho protein signal transduction // inferred from direct assay /// 0045767 // regulation of anti-apoptosis // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005095 // GTPase inhibitor activity // inferred from direct assay /// 0005095 // GTPase inhibitor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0017048 // Rho GTPase binding // inferred from electronic annotation /// 0017049 // GTP-Rho binding // inferred from direct assay /// 0017049 // GTP-Rho binding // inferred from electronic annotation","chr2:74653009-74669546 (-) // 98.04 // p13.1"]
["11750150_s_at",-0.00823307,-0.017626762,0.00823307,0.35507965,0.16647339,-0.030082703,0.5891152,0.20251328,-1.1248238,-0.16969903,1.1248238,"down","ZNF815P /// ZNF890P","401303 /// 645700","0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation","chr7:5862790-5887498 (+) // 90.78 // p22.1"]
["11760467_at",-0.17544651,0.034125328,-0.043204784,0.07082796,-0.034125328,0.096684456,0.6068114,0.22074483,-1.0762185,-0.10597099,1.0762185,"down","LOC613206",613206.0,"","","","chr9:127020588-127027106 (-) // 78.5 // q33.3"]
["11728852_a_at",-0.16865993,0.03426099,-0.028023243,-0.12973666,0.12414169,0.028023243,0.82570195,0.55307573,-1.0436347,-0.061616752,1.0436347,"down","TUB",7275.0,"0006909 // phagocytosis // inferred from electronic annotation /// 0050766 // positive regulation of phagocytosis // inferred from direct assay /// 0050896 // response to stimulus // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","","chr11:8060179-8128759 (+) // 94.08 // p15.4"]
["11757826_a_at",0.06626034,-0.019746304,-0.034235,0.019746304,-0.0541234,0.045336723,0.99764955,0.99237806,1.0003049,4.3986455E-4,1.0003049,"up","DHX8",1659.0,"0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0006396 // RNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005681 // spliceosomal complex // traceable author statement /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0004004 // ATP-dependent RNA helicase activity // traceable author statement /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr17:41598768-41622167 (+) // 97.1 // q21.31"]
["11758335_s_at",0.048516273,0.043183327,0.012738228,-0.03691387,-0.012738228,-0.043107033,0.20083624,0.010531804,1.0466161,0.06573232,1.0466161,"up","FDX1",2230.0,"0006091 // generation of precursor metabolites and energy // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0022900 // electron transport chain // inferred from electronic annotation /// 0030325 // adrenal gland development // inferred from electronic annotation /// 0034698 // response to gonadotropin stimulus // inferred from electronic annotation /// 0044320 // cellular response to leptin stimulus // inferred from electronic annotation /// 0044321 // response to leptin stimulus // inferred from electronic annotation /// 0050790 // regulation of catalytic activity // inferred from electronic annotation /// 0051353 // positive regulation of oxidoreductase activity // inferred from electronic annotation /// 0070995 // NADPH oxidation // inferred from electronic annotation /// 0071407 // cellular response to organic cyclic compound // inferred from electronic annotation /// 0071872 // cellular response to epinephrine stimulus // inferred from electronic annotation","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005739 // mitochondrion // traceable author statement /// 0005759 // mitochondrial matrix // inferred from electronic annotation /// 0030061 // mitochondrial crista // inferred from electronic annotation","0005506 // iron ion binding // inferred from electronic annotation /// 0005506 // iron ion binding // traceable author statement /// 0008386 // cholesterol monooxygenase (side-chain-cleaving) activity // inferred from electronic annotation /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0009055 // electron carrier activity // traceable author statement /// 0015039 // NADPH-adrenodoxin reductase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation /// 0051537 // 2 iron, 2 sulfur cluster binding // inferred from electronic annotation","chr11:110306581-110333510 (+) // 90.05 // q22.3"]
["11760377_a_at",0.12697697,-0.20613241,0.047471046,0.020903587,-0.047471046,-0.020903587,0.9883912,0.9614778,1.0036541,0.0052621756,1.0036541,"up","EFCAB11",90141.0,"","","0005509 // calcium ion binding // inferred from electronic annotation","chr14:90389555-90421094 (-) // 99.85 // q32.11"]
["11719531_a_at",-0.18491602,0.014756203,-0.0350399,0.027163506,0.08474827,-0.014756203,0.5914903,0.20463565,-1.0723568,-0.10078503,1.0723568,"down","MMP19",4327.0,"0001525 // angiogenesis // inferred from electronic annotation /// 0001541 // ovarian follicle development // inferred from electronic annotation /// 0001542 // ovulation from ovarian follicle // inferred from electronic annotation /// 0001554 // luteolysis // inferred from electronic annotation /// 0006508 // proteolysis // non-traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009725 // response to hormone stimulus // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030574 // collagen catabolic process // inferred from electronic annotation /// 0051591 // response to cAMP // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // non-traceable author statement /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from electronic annotation","0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:56229214-56236767 (-) // 88.48 // q13.2"]
["11715240_at",-0.05025339,-0.0753274,0.07496071,0.050252914,0.09159756,-0.22440529,0.97721744,0.9272452,1.0074058,0.010644882,1.0074058,"up","ZNF184",7738.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008270 // zinc ion binding // non-traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:27418521-27440897 (-) // 95.7 // p22.1"]
["11716451_s_at",-7.944107E-4,0.15873194,-0.0045490265,7.944107E-4,0.039969444,-0.04226446,0.7587941,0.42962977,1.036435,0.05162965,1.036435,"up","RFTN1",23180.0,"","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0045121 // membrane raft // inferred from direct assay","","chr3:16357240-16555501 (-) // 98.17 // p25.1"]
["11723063_a_at",-0.021348,0.016778946,0.031492233,0.019503593,-0.019441605,-0.016778946,0.8030909,0.51012814,1.010134,0.014546661,1.010134,"up","GCHFR",2644.0,"0006461 // protein complex assembly // inferred from electronic annotation /// 0006809 // nitric oxide biosynthetic process // traceable author statement /// 0009890 // negative regulation of biosynthetic process // inferred from electronic annotation /// 0042133 // neurotransmitter metabolic process // traceable author statement /// 0043105 // negative regulation of GTP cyclohydrolase I activity // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046209 // nitric oxide metabolic process // traceable author statement /// 0050999 // regulation of nitric-oxide synthase activity // traceable author statement /// 0051291 // protein heterooligomerization // inferred from electronic annotation","0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030425 // dendrite // inferred from direct assay /// 0031965 // nuclear membrane // inferred from direct assay /// 0031965 // nuclear membrane // inferred from electronic annotation /// 0042470 // melanosome // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation","0004857 // enzyme inhibitor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016597 // amino acid binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from electronic annotation /// 0030742 // GTP-dependent protein binding // inferred from electronic annotation","chr15:41056217-41060088 (+) // 97.71 // q15.1"]
["11744453_s_at",-0.045999527,-0.063020706,0.009278297,-0.009278297,0.020015717,0.026917458,0.5106124,0.1347161,-1.0322547,-0.04579898,1.0322547,"down","TMBIM4",51643.0,"0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from mutant phenotype /// 0050848 // regulation of calcium-mediated signaling // inferred from direct assay","0005794 // Golgi apparatus // inferred from electronic annotation /// 0005795 // Golgi stack // inferred from direct assay /// 0005795 // Golgi stack // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr12:66531613-66563766 (-) // 95.95 // q14.3"]
["11760844_a_at",-0.10147476,0.00582695,-0.13796473,0.12078667,-0.00582695,0.12445402,0.3868667,0.060469452,-1.1154883,-0.15767537,1.1154883,"down","RPN2",6185.0,"0006412 // translation // traceable author statement /// 0006464 // cellular protein modification process // traceable author statement /// 0006487 // protein N-linked glycosylation // inferred from electronic annotation /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0018279 // protein N-linked glycosylation via asparagine // inferred from electronic annotation /// 0018279 // protein N-linked glycosylation via asparagine // non-traceable author statement /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0008250 // oligosaccharyltransferase complex // inferred from electronic annotation /// 0008250 // oligosaccharyltransferase complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004579 // dolichyl-diphosphooligosaccharide-protein glycotransferase activity // inferred from electronic annotation /// 0004579 // dolichyl-diphosphooligosaccharide-protein glycotransferase activity // non-traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation","chr20:35827038-35857423 (+) // 96.15 // q11.23"]
["11718531_a_at",0.018158913,0.043340683,0.087711334,-0.070399284,-0.033154488,-0.018158913,0.27701604,0.024232944,1.0645974,0.090307906,1.0645974,"up","CAD",790.0,"0006206 // pyrimidine base metabolic process // traceable author statement /// 0006207 // 'de novo' pyrimidine base biosynthetic process // inferred from sequence or structural similarity /// 0006207 // 'de novo' pyrimidine base biosynthetic process // inferred from electronic annotation /// 0006221 // pyrimidine nucleotide biosynthetic process // inferred from electronic annotation /// 0006520 // cellular amino acid metabolic process // inferred from electronic annotation /// 0006541 // glutamine metabolic process // inferred from sequence or structural similarity /// 0006543 // glutamine catabolic process // inferred from electronic annotation /// 0006807 // nitrogen compound metabolic process // inferred from electronic annotation /// 0007565 // female pregnancy // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0014075 // response to amine stimulus // inferred from electronic annotation /// 0017144 // drug metabolic process // inferred from sequence or structural similarity /// 0017144 // drug metabolic process // inferred from electronic annotation /// 0018107 // peptidyl-threonine phosphorylation // inferred from sequence or structural similarity /// 0031000 // response to caffeine // inferred from electronic annotation /// 0031100 // organ regeneration // inferred from electronic annotation /// 0033574 // response to testosterone stimulus // inferred from electronic annotation /// 0044205 // 'de novo' UMP biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046134 // pyrimidine nucleoside biosynthetic process // traceable author statement /// 0046777 // protein autophosphorylation // inferred from sequence or structural similarity /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement /// 0070409 // carbamoyl phosphate biosynthetic process // inferred from electronic annotation","0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016363 // nuclear matrix // inferred from direct assay /// 0042995 // cell projection // inferred from sequence or structural similarity /// 0043025 // neuronal cell body // inferred from sequence or structural similarity /// 0043195 // terminal button // inferred from sequence or structural similarity /// 0043234 // protein complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004070 // aspartate carbamoyltransferase activity // inferred from sequence or structural similarity /// 0004070 // aspartate carbamoyltransferase activity // traceable author statement /// 0004070 // aspartate carbamoyltransferase activity // inferred from electronic annotation /// 0004088 // carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity // inferred from sequence or structural similarity /// 0004088 // carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity // traceable author statement /// 0004088 // carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity // inferred from electronic annotation /// 0004151 // dihydroorotase activity // inferred from sequence or structural similarity /// 0004151 // dihydroorotase activity // traceable author statement /// 0004151 // dihydroorotase activity // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from sequence or structural similarity /// 0005524 // ATP binding // inferred from sequence or structural similarity /// 0005524 // ATP binding // inferred from electronic annotation /// 0016597 // amino acid binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016743 // carboxyl- or carbamoyltransferase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016810 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds // inferred from electronic annotation /// 0016812 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from sequence or structural similarity /// 0042802 // identical protein binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070335 // aspartate binding // inferred from sequence or structural similarity","chr2:27440257-27468832 (+) // 94.29 // p23.3"]
["11729274_a_at",-0.017938137,0.017938137,-0.10703993,0.15113926,-0.05251932,0.19465733,0.5762932,0.19052465,-1.0969054,-0.13343905,1.0969054,"down","GBP5",115362.0,"0006184 // GTP catabolic process // inferred from electronic annotation /// 0071346 // cellular response to interferon-gamma // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation","chr1:89724632-89736546 (-) // 76.63 // p22.2"]
["11726372_a_at",0.028199673,0.04144478,0.0047683716,-0.0047683716,-0.16963959,-0.11674547,0.4077604,0.07057281,1.0881333,0.12185535,1.0881333,"up","STAU2",27067.0,"0006810 // transport // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0003725 // double-stranded RNA binding // inferred from electronic annotation /// 0003725 // double-stranded RNA binding // traceable author statement","chr8:74461658-74659857 (-) // 96.22 // q21.11"]
["11739071_a_at",0.05013275,0.012238979,0.088265896,-0.08463335,-0.012238979,-0.03173542,0.33044007,0.039128333,1.0666462,0.09308174,1.0666462,"up","EPDR1",54749.0,"0007160 // cell-matrix adhesion // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr7:37960162-37991623 (+) // 78.7 // p14.1"]
["11731510_at",-0.07132959,-2.7179718E-4,0.14993429,0.02913189,2.7179718E-4,-0.10547972,0.81904787,0.5404202,1.0363201,0.05146968,1.0363201,"up","DBT",1629.0,"0008152 // metabolic process // inferred from electronic annotation /// 0009083 // branched chain family amino acid catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046949 // fatty-acyl-CoA biosynthetic process // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005739 // mitochondrion // traceable author statement /// 0005759 // mitochondrial matrix // traceable author statement /// 0005759 // mitochondrial matrix // inferred from electronic annotation /// 0005947 // mitochondrial alpha-ketoglutarate dehydrogenase complex // traceable author statement /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0042645 // mitochondrial nucleoid // inferred from direct assay","0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0043754 // dihydrolipoyllysine-residue (2-methylpropanoyl)transferase activity // inferred from electronic annotation /// 0048037 // cofactor binding // inferred from electronic annotation","chr1:100652477-100715409 (-) // 67.23 // p21.2"]
["11745348_x_at",-0.02096653,0.046071053,-5.6934357E-4,0.10155201,5.6934357E-4,-0.032613754,0.9157563,0.7555562,-1.010445,-0.014990794,1.010445,"down","C15orf27",123591.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr15:76352298-76497303 (+) // 98.61 // q24.2"]
["11753686_s_at",-0.033403397,0.012882233,-0.07041836,0.03865528,0.027748108,-0.012882233,0.5532993,0.16925503,-1.0339408,-0.04815357,1.0339408,"down","AGTRAP",57085.0,"0001666 // response to hypoxia // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0008217 // regulation of blood pressure // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004945 // angiotensin type II receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr1:11796265-11810249 (+) // 99.58 // p36.22"]
["11735824_at",0.1031754,-0.046370745,-0.057689667,0.15540028,0.0055127144,-0.0055127144,0.8072258,0.5167912,-1.0367694,-0.05209503,1.0367694,"down","RRH",10692.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007601 // visual perception // inferred from electronic annotation /// 0007601 // visual perception // traceable author statement /// 0007602 // phototransduction // inferred from electronic annotation /// 0018298 // protein-chromophore linkage // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation","0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement /// 0009881 // photoreceptor activity // inferred from electronic annotation","chr4:110749149-110765867 (+) // 90.56 // q25"]
["11720697_a_at",-0.0131139755,0.09815121,0.0556612,-0.016008377,-0.0029859543,0.0029859543,0.5732189,0.18752792,1.0368704,0.052235525,1.0368704,"up","HDAC7",51564.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001570 // vasculogenesis // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007043 // cell-cell junction assembly // inferred from electronic annotation /// 0007219 // Notch signaling pathway // traceable author statement /// 0016568 // chromatin modification // inferred from electronic annotation /// 0016575 // histone deacetylation // inferred from electronic annotation /// 0032703 // negative regulation of interleukin-2 production // inferred from direct assay /// 0045668 // negative regulation of osteoblast differentiation // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0090050 // positive regulation of cell migration involved in sprouting angiogenesis // inferred from mutant phenotype","0000118 // histone deacetylase complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0003682 // chromatin binding // inferred from electronic annotation /// 0003714 // transcription corepressor activity // inferred from electronic annotation /// 0004407 // histone deacetylase activity // inferred from electronic annotation /// 0005080 // protein kinase C binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0031078 // histone deacetylase activity (H3-K14 specific) // inferred from electronic annotation /// 0032041 // NAD-dependent histone deacetylase activity (H3-K14 specific) // inferred from electronic annotation /// 0032129 // histone deacetylase activity (H3-K9 specific) // inferred from electronic annotation /// 0033613 // activating transcription factor binding // inferred from physical interaction /// 0034739 // histone deacetylase activity (H4-K16 specific) // inferred from electronic annotation /// 0046969 // NAD-dependent histone deacetylase activity (H3-K9 specific) // inferred from electronic annotation /// 0046970 // NAD-dependent histone deacetylase activity (H4-K16 specific) // inferred from electronic annotation /// 0070491 // repressing transcription factor binding // inferred from physical interaction /// 0071889 // 14-3-3 protein binding // inferred from direct assay","chr12:48176508-48213763 (-) // 96.95 // q13.11"]
["11726960_a_at",-0.0043416023,0.10131645,0.0043416023,-0.020140886,-0.0341897,0.0830102,0.87196344,0.6542859,1.0169243,0.024212234,1.0169243,"up","GRIN2A",2903.0,"0001508 // regulation of action potential // inferred from electronic annotation /// 0001964 // startle response // inferred from electronic annotation /// 0001975 // response to amphetamine // inferred from electronic annotation /// 0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0007215 // glutamate receptor signaling pathway // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007268 // synaptic transmission // inferred from electronic annotation /// 0007611 // learning or memory // traceable author statement /// 0007611 // learning or memory // inferred from electronic annotation /// 0007612 // learning // inferred from electronic annotation /// 0007613 // memory // inferred from electronic annotation /// 0008104 // protein localization // inferred from electronic annotation /// 0008542 // visual learning // inferred from electronic annotation /// 0009416 // response to light stimulus // inferred from electronic annotation /// 0009611 // response to wounding // inferred from electronic annotation /// 0009743 // response to carbohydrate stimulus // inferred from electronic annotation /// 0010042 // response to manganese ion // inferred from electronic annotation /// 0010942 // positive regulation of cell death // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0014075 // response to amine stimulus // inferred from electronic annotation /// 0019233 // sensory perception of pain // inferred from electronic annotation /// 0021510 // spinal cord development // inferred from electronic annotation /// 0021766 // hippocampus development // inferred from electronic annotation /// 0021987 // cerebral cortex development // inferred from electronic annotation /// 0022008 // neurogenesis // inferred from electronic annotation /// 0030431 // sleep // inferred from electronic annotation /// 0033058 // directional locomotion // inferred from electronic annotation /// 0035235 // ionotropic glutamate receptor signaling pathway // inferred from electronic annotation /// 0040011 // locomotion // inferred from electronic annotation /// 0042177 // negative regulation of protein catabolic process // inferred from electronic annotation /// 0042220 // response to cocaine // inferred from electronic annotation /// 0042391 // regulation of membrane potential // inferred from electronic annotation /// 0042417 // dopamine metabolic process // inferred from electronic annotation /// 0042428 // serotonin metabolic process // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0045471 // response to ethanol // inferred from direct assay /// 0045471 // response to ethanol // inferred from electronic annotation /// 0048167 // regulation of synaptic plasticity // inferred from electronic annotation /// 0048169 // regulation of long-term neuronal synaptic plasticity // inferred from electronic annotation /// 0048511 // rhythmic process // inferred from electronic annotation /// 0050804 // regulation of synaptic transmission // inferred from electronic annotation /// 0051592 // response to calcium ion // inferred from electronic annotation /// 0051597 // response to methylmercury // inferred from electronic annotation /// 0051707 // response to other organism // inferred from electronic annotation /// 0051930 // regulation of sensory perception of pain // inferred from electronic annotation /// 0060078 // regulation of postsynaptic membrane potential // inferred from electronic annotation /// 0060079 // regulation of excitatory postsynaptic membrane potential // inferred from electronic annotation /// 0060359 // response to ammonium ion // inferred from electronic annotation /// 0060992 // response to fungicide // inferred from electronic annotation /// 0070588 // calcium ion transmembrane transport // inferred from electronic annotation /// 0071230 // cellular response to amino acid stimulus // inferred from electronic annotation /// 0071286 // cellular response to magnesium ion // inferred from electronic annotation /// 0071287 // cellular response to manganese ion // inferred from electronic annotation /// 0071294 // cellular response to zinc ion // inferred from electronic annotation /// 0071359 // cellular response to dsRNA // inferred from electronic annotation /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation /// 0071396 // cellular response to lipid // inferred from electronic annotation","0005624 // membrane fraction // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from sequence or structural similarity /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0017146 // N-methyl-D-aspartate selective glutamate receptor complex // inferred from direct assay /// 0017146 // N-methyl-D-aspartate selective glutamate receptor complex // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030288 // outer membrane-bounded periplasmic space // inferred from electronic annotation /// 0042734 // presynaptic membrane // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043195 // terminal button // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004970 // ionotropic glutamate receptor activity // inferred from electronic annotation /// 0004972 // N-methyl-D-aspartate selective glutamate receptor activity // inferred from electronic annotation /// 0004972 // N-methyl-D-aspartate selective glutamate receptor activity // traceable author statement /// 0005215 // transporter activity // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005234 // extracellular-glutamate-gated ion channel activity // inferred from electronic annotation /// 0005261 // cation channel activity // inferred from electronic annotation /// 0005262 // calcium channel activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from sequence or structural similarity /// 0016595 // glutamate binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0022843 // voltage-gated cation channel activity // inferred from electronic annotation /// 0035254 // glutamate receptor binding // inferred from electronic annotation /// 0042165 // neurotransmitter binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050839 // cell adhesion molecule binding // inferred from electronic annotation /// 0051117 // ATPase binding // inferred from electronic annotation","chr16:9847260-10276263 (-) // 96.57 // p13.2"]
["11735515_at",0.01444149,-0.15440607,0.08545232,-0.19544148,-0.0043945312,0.004394293,0.87061816,0.6518442,1.0330975,0.046976425,1.0330975,"up","PATE4",399968.0,"0009611 // response to wounding // inferred from electronic annotation /// 0050804 // regulation of synaptic transmission // inferred from electronic annotation","0001669 // acrosomal vesicle // inferred from electronic annotation /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","","chr11:125703210-125709967 (+) // 53.04 // q24.2"]
["11728352_x_at",-0.017626762,0.017626762,0.051053047,-0.0449543,-0.051062584,0.1361084,0.98715717,0.957555,1.0025358,0.0036537843,1.0025358,"up","EFEMP2",30008.0,"0007596 // blood coagulation // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005604 // basement membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0005201 // extracellular matrix structural constituent // traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr11:65633917-65640340 (-) // 89.59 // q13.1"]
["11759108_at",-0.009640217,0.19588614,-0.009640217,0.009639978,0.087082386,-0.37563276,0.7342273,0.3927135,1.1109846,0.15183876,1.1109846,"up","KRIT1",889.0,"0001525 // angiogenesis // inferred from electronic annotation /// 0001937 // negative regulation of endothelial cell proliferation // inferred from mutant phenotype /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0010596 // negative regulation of endothelial cell migration // inferred from mutant phenotype /// 0016525 // negative regulation of angiogenesis // inferred from mutant phenotype /// 0016525 // negative regulation of angiogenesis // inferred from electronic annotation /// 0032092 // positive regulation of protein binding // inferred from electronic annotation /// 0045454 // cell redox homeostasis // inferred from mutant phenotype /// 0045454 // cell redox homeostasis // inferred from electronic annotation /// 2000114 // regulation of establishment of cell polarity // inferred from mutant phenotype /// 2000114 // regulation of establishment of cell polarity // inferred from electronic annotation /// 2000352 // negative regulation of endothelial cell apoptotic process // inferred from mutant phenotype","0005856 // cytoskeleton // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0005083 // small GTPase regulator activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr7:91828282-91875237 (-) // 83.25 // q21.2"]
["11744289_a_at",-0.020607948,0.027058601,0.03832054,-0.07004452,-0.054551125,0.020607948,0.59700817,0.21087158,1.0349681,0.049586352,1.0349681,"up","JMJD6",23210.0,"0001568 // blood vessel development // inferred from electronic annotation /// 0001822 // kidney development // inferred from electronic annotation /// 0002040 // sprouting angiogenesis // inferred from sequence or structural similarity /// 0002040 // sprouting angiogenesis // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0018395 // peptidyl-lysine hydroxylation to 5-hydroxy-L-lysine // inferred from direct assay /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0033077 // T cell differentiation in thymus // inferred from electronic annotation /// 0042116 // macrophage activation // inferred from electronic annotation /// 0043277 // apoptotic cell clearance // inferred from electronic annotation /// 0043654 // recognition of apoptotic cell // inferred from electronic annotation /// 0048024 // regulation of nuclear mRNA splicing, via spliceosome // inferred from mutant phenotype /// 0048024 // regulation of nuclear mRNA splicing, via spliceosome // inferred from electronic annotation /// 0048821 // erythrocyte development // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0060041 // retina development in camera-type eye // inferred from electronic annotation /// 0070078 // histone H3-R2 demethylation // inferred from direct assay /// 0070079 // histone H4-R3 demethylation // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation","0003723 // RNA binding // traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0003727 // single-stranded RNA binding // inferred from direct assay /// 0004872 // receptor activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016702 // oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen // inferred from electronic annotation /// 0033746 // histone demethylase activity (H3-R2 specific) // inferred from direct assay /// 0033749 // histone demethylase activity (H4-R3 specific) // inferred from direct assay /// 0042802 // identical protein binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070815 // peptidyl-lysine 5-dioxygenase activity // inferred from direct assay","chr17:74714532-74722881 (-) // 97.67 // q25.1"]
["11748286_s_at",-0.052553654,-0.026346207,-0.16721249,0.02634573,0.109612465,0.08339167,0.31869236,0.0355731,-1.1135405,-0.15515406,1.1135405,"down","FAM219B",57184.0,"","","","chr15:75194162-75199221 (-) // 99.94 // q24.1"]
["11753441_a_at",-0.26460266,-0.02376604,0.26102686,0.066643715,-0.031410217,0.02376604,0.95452774,0.8613263,-1.0201494,-0.028780378,1.0201494,"down","HILS1",373861.0,"0006334 // nucleosome assembly // inferred from electronic annotation /// 0006338 // chromatin remodeling // non-traceable author statement /// 0006342 // chromatin silencing // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007281 // germ cell development // inferred from direct assay /// 0007283 // spermatogenesis // inferred from direct assay /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030261 // chromosome condensation // inferred from direct assay","0000786 // nucleosome // inferred from direct assay /// 0000786 // nucleosome // inferred from electronic annotation /// 0001673 // male germ cell nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0042393 // histone binding // inferred from direct assay","chr17:48248810-48249837 (-) // 98.28 // q21.33"]
["11715517_s_at",0.035125732,0.04445362,0.050171852,-0.035125732,-0.12534237,-0.0911026,0.18676919,0.008851638,1.0921018,0.12710735,1.0921018,"up","SLC25A39",51629.0,"0006783 // heme biosynthetic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr17:42396995-42402195 (-) // 72.66 // q21.31"]
["11735519_a_at",0.0,0.09890032,0.17507482,0.0,-0.061787605,-0.1499083,0.4116161,0.072452314,1.1187521,0.16189042,1.1187521,"up","ART5",116969.0,"0006471 // protein ADP-ribosylation // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation","0003950 // NAD+ ADP-ribosyltransferase activity // inferred from electronic annotation /// 0003953 // NAD+ nucleosidase activity // inferred from electronic annotation /// 0003956 // NAD(P)+-protein-arginine ADP-ribosyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation","chr11:3659735-3663511 (-) // 97.31 // p15.4"]
["11756363_a_at",0.049886227,-0.014885426,-0.0017666817,-0.0784111,0.24757099,0.0017662048,0.8790971,0.670211,-1.032325,-0.045897275,1.032325,"down","NCKAP1L",3071.0,"0001782 // B cell homeostasis // inferred from sequence or structural similarity /// 0001782 // B cell homeostasis // inferred from electronic annotation /// 0002262 // myeloid cell homeostasis // inferred from sequence or structural similarity /// 0002262 // myeloid cell homeostasis // inferred from electronic annotation /// 0006461 // protein complex assembly // inferred from sequence or structural similarity /// 0006461 // protein complex assembly // inferred from electronic annotation /// 0030011 // maintenance of cell polarity // inferred from mutant phenotype /// 0030593 // neutrophil chemotaxis // inferred from direct assay /// 0030838 // positive regulation of actin filament polymerization // inferred from mutant phenotype /// 0030838 // positive regulation of actin filament polymerization // inferred from electronic annotation /// 0030866 // cortical actin cytoskeleton organization // inferred from mutant phenotype /// 0030890 // positive regulation of B cell proliferation // inferred from mutant phenotype /// 0032700 // negative regulation of interleukin-17 production // inferred from sequence or structural similarity /// 0032700 // negative regulation of interleukin-17 production // inferred from electronic annotation /// 0032715 // negative regulation of interleukin-6 production // inferred from sequence or structural similarity /// 0032715 // negative regulation of interleukin-6 production // inferred from electronic annotation /// 0032855 // positive regulation of Rac GTPase activity // inferred from mutant phenotype /// 0033630 // positive regulation of cell adhesion mediated by integrin // inferred from sequence or structural similarity /// 0033630 // positive regulation of cell adhesion mediated by integrin // inferred from electronic annotation /// 0035509 // negative regulation of myosin-light-chain-phosphatase activity // inferred from mutant phenotype /// 0042102 // positive regulation of T cell proliferation // inferred from sequence or structural similarity /// 0042102 // positive regulation of T cell proliferation // inferred from electronic annotation /// 0042221 // response to chemical stimulus // inferred from direct assay /// 0042327 // positive regulation of phosphorylation // inferred from mutant phenotype /// 0042493 // response to drug // inferred from mutant phenotype /// 0043029 // T cell homeostasis // inferred from sequence or structural similarity /// 0043029 // T cell homeostasis // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043372 // positive regulation of CD4-positive, alpha-beta T cell differentiation // inferred from sequence or structural similarity /// 0043372 // positive regulation of CD4-positive, alpha-beta T cell differentiation // inferred from electronic annotation /// 0043378 // positive regulation of CD8-positive, alpha-beta T cell differentiation // inferred from sequence or structural similarity /// 0043378 // positive regulation of CD8-positive, alpha-beta T cell differentiation // inferred from electronic annotation /// 0045579 // positive regulation of B cell differentiation // inferred from sequence or structural similarity /// 0045579 // positive regulation of B cell differentiation // inferred from electronic annotation /// 0045588 // positive regulation of gamma-delta T cell differentiation // inferred from sequence or structural similarity /// 0045588 // positive regulation of gamma-delta T cell differentiation // inferred from electronic annotation /// 0045621 // positive regulation of lymphocyte differentiation // inferred from sequence or structural similarity /// 0045621 // positive regulation of lymphocyte differentiation // inferred from electronic annotation /// 0045648 // positive regulation of erythrocyte differentiation // inferred from sequence or structural similarity /// 0045648 // positive regulation of erythrocyte differentiation // inferred from electronic annotation /// 0045860 // positive regulation of protein kinase activity // inferred from mutant phenotype /// 0048821 // erythrocyte development // inferred from expression pattern /// 0050853 // B cell receptor signaling pathway // inferred from mutant phenotype /// 0060100 // positive regulation of phagocytosis, engulfment // inferred from sequence or structural similarity /// 0060100 // positive regulation of phagocytosis, engulfment // inferred from electronic annotation /// 0070358 // actin polymerization-dependent cell motility // inferred from mutant phenotype /// 0090023 // positive regulation of neutrophil chemotaxis // inferred from sequence or structural similarity /// 0090023 // positive regulation of neutrophil chemotaxis // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005829 // cytosol // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031209 // SCAR complex // inferred from direct assay /// 0031209 // SCAR complex // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0030295 // protein kinase activator activity // inferred from mutant phenotype /// 0030675 // Rac GTPase activator activity // inferred from mutant phenotype /// 0032403 // protein complex binding // inferred from direct assay","chr12:54891541-54936799 (+) // 92.08 // q13.13"]
["11756618_x_at",-0.015202045,-0.036993504,-0.10248041,0.057388306,0.027861595,0.015202522,0.3409682,0.04293222,-1.0607193,-0.08504286,1.0607193,"down","TAPBP",6892.0,"0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006461 // protein complex assembly // traceable author statement /// 0006890 // retrograde vesicle-mediated transport, Golgi to ER // non-traceable author statement /// 0006955 // immune response // traceable author statement /// 0019885 // antigen processing and presentation of endogenous peptide antigen via MHC class I // inferred from electronic annotation /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0050823 // peptide antigen stabilization // inferred from sequence or structural similarity","0000139 // Golgi membrane // inferred from direct assay /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030670 // phagocytic vesicle membrane // traceable author statement /// 0042824 // MHC class I peptide loading complex // non-traceable author statement /// 0042825 // TAP complex // inferred from direct assay /// 0071556 // integral to lumenal side of endoplasmic reticulum membrane // traceable author statement","0005515 // protein binding // inferred from physical interaction /// 0015433 // peptide antigen-transporting ATPase activity // traceable author statement /// 0042288 // MHC class I protein binding // traceable author statement /// 0042605 // peptide antigen binding // traceable author statement /// 0046978 // TAP1 binding // inferred from physical interaction /// 0046978 // TAP1 binding // traceable author statement /// 0046979 // TAP2 binding // inferred from physical interaction /// 0046979 // TAP2 binding // traceable author statement /// 0051082 // unfolded protein binding // traceable author statement","chr6:33271731-33282028 (-) // 91.37 // p21.32"]
["11716242_a_at",-0.01044178,0.053771973,0.057242393,0.0017557144,-0.094397545,-0.0017557144,0.5491147,0.16590782,1.0460777,0.06499005,1.0460777,"up","PES1",23481.0,"0000089 // mitotic metaphase // inferred from electronic annotation /// 0000463 // maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) // inferred from mutant phenotype /// 0000466 // maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) // inferred from mutant phenotype /// 0006364 // rRNA processing // inferred from mutant phenotype /// 0006364 // rRNA processing // inferred from electronic annotation /// 0007000 // nucleolus organization // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from mutant phenotype /// 0008283 // cell proliferation // non-traceable author statement /// 0033365 // protein localization to organelle // inferred from electronic annotation /// 0042254 // ribosome biogenesis // inferred from electronic annotation /// 0042273 // ribosomal large subunit biogenesis // inferred by curator /// 0051726 // regulation of cell cycle // inferred from mutant phenotype","0000793 // condensed chromosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0030687 // preribosome, large subunit precursor // inferred from direct assay /// 0070545 // PeBoW complex // inferred from direct assay /// 0070545 // PeBoW complex // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr22:30972611-31003070 (-) // 93.34 // q12.2"]
["11724558_at",-0.041787863,0.024110556,0.054688215,-0.024110794,0.04317522,-0.05730772,0.834888,0.5740458,1.0175395,0.025084801,1.0175395,"up","GNA15",2769.0,"0006184 // GTP catabolic process // traceable author statement /// 0006471 // protein ADP-ribosylation // inferred from electronic annotation /// 0007165 // signal transduction // inferred from genetic interaction /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007188 // adenylate cyclase-modulating G-protein coupled receptor signaling pathway // not recorded /// 0007200 // phospholipase C-activating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007202 // activation of phospholipase C activity // traceable author statement /// 0007204 // elevation of cytosolic calcium ion concentration // inferred from genetic interaction /// 0007204 // elevation of cytosolic calcium ion concentration // inferred from electronic annotation /// 0007207 // phospholipase C-activating G-protein coupled acetylcholine receptor signaling pathway // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0032957 // inositol trisphosphate metabolic process // inferred from electronic annotation /// 0060158 // phospholipase C-activating dopamine receptor signaling pathway // not recorded","0005834 // heterotrimeric G-protein complex // not recorded /// 0005834 // heterotrimeric G-protein complex // non-traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0031234 // extrinsic to internal side of plasma membrane // not recorded","0000166 // nucleotide binding // inferred from electronic annotation /// 0001664 // G-protein coupled receptor binding // not recorded /// 0003924 // GTPase activity // traceable author statement /// 0004871 // signal transducer activity // inferred from genetic interaction /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005525 // GTP binding // non-traceable author statement /// 0005525 // GTP binding // inferred from electronic annotation /// 0019001 // guanyl nucleotide binding // inferred from electronic annotation /// 0031683 // G-protein beta/gamma-subunit complex binding // not recorded /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:3136026-3163747 (+) // 97.68 // p13.3"]
["11727651_at",0.009431362,-0.009431362,0.030938625,-0.042780876,0.1165483,-0.013121128,0.95130205,0.85350585,-1.0068876,-0.009902578,1.0068876,"down","SRRM4",84530.0,"0006397 // mRNA processing // inferred from sequence or structural similarity /// 0006397 // mRNA processing // inferred from electronic annotation /// 0007399 // nervous system development // inferred from sequence or structural similarity /// 0007399 // nervous system development // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from sequence or structural similarity /// 0030154 // cell differentiation // inferred from electronic annotation /// 0043484 // regulation of RNA splicing // inferred from sequence or structural similarity /// 0043484 // regulation of RNA splicing // inferred from electronic annotation","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0003729 // mRNA binding // inferred from sequence or structural similarity /// 0003729 // mRNA binding // inferred from electronic annotation","chr12:119419290-119600856 (+) // 90.91 // q24.23"]
["11742447_x_at",-0.07512617,0.2532935,-0.12966728,0.07512617,-0.13486028,0.09482813,0.99302655,0.97613096,1.0031023,0.0044687483,1.0031023,"up","RNF222",643904.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:8294024-8301144 (-) // 83.91 // p13.1"]
["11736813_at",0.016154528,-0.116200924,-0.16010284,-0.01615429,0.07276368,0.17839503,0.4575047,0.099479504,-1.1212059,-0.16505127,1.1212059,"down","PDCD1LG2",80380.0,"0006955 // immune response // non-traceable author statement /// 0031295 // T cell costimulation // traceable author statement /// 0042102 // positive regulation of T cell proliferation // inferred from electronic annotation /// 0042130 // negative regulation of T cell proliferation // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation","chr9:5510526-5571282 (+) // 97.42 // p24.1"]
["11726057_a_at",-0.023219109,-0.091156006,-0.11088133,0.023218632,0.12074566,0.07376766,0.251915,0.018854737,-1.1077734,-0.14766283,1.1077734,"down","SMEK2",57223.0,"","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation","","chr2:55775014-55844796 (-) // 96.01 // p16.1"]
["11726123_a_at",-0.07884359,0.058707714,0.15586233,0.035224438,-0.06233263,-0.035224438,0.75469166,0.42292985,1.0468246,0.0660197,1.0468246,"up","EVPL",2125.0,"0008544 // epidermis development // traceable author statement /// 0018149 // peptide cross-linking // inferred from direct assay /// 0030216 // keratinocyte differentiation // inferred from direct assay /// 0031424 // keratinization // inferred from electronic annotation","0001533 // cornified envelope // inferred from direct assay /// 0001533 // cornified envelope // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030057 // desmosome // inferred from electronic annotation","0005198 // structural molecule activity // inferred from direct assay /// 0005198 // structural molecule activity // traceable author statement /// 0030674 // protein binding, bridging // inferred from direct assay","chr17:74002926-74023533 (-) // 98.84 // q25.1"]
["11756989_x_at",0.04359913,0.013869286,0.045817375,-0.013869286,-0.059132576,-0.023435593,0.24821177,0.017978106,1.0472271,0.066574395,1.0472271,"up","KRT8",3856.0,"0007010 // cytoskeleton organization // non-traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005882 // intermediate filament // non-traceable author statement /// 0005882 // intermediate filament // inferred from electronic annotation /// 0016363 // nuclear matrix // inferred from electronic annotation /// 0045095 // keratin filament // inferred from electronic annotation","0005198 // structural molecule activity // non-traceable author statement /// 0005198 // structural molecule activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr8:62490714-62492428 (+) // 97.07 // q12.3 /// chr12:53291013-53298829 (-) // 95.82 // q13.13"]
["11750152_a_at",1.5306473E-4,0.12033987,-0.0823617,-1.5306473E-4,-0.1519723,0.08248091,0.8967265,0.71144545,1.0252141,0.03592519,1.0252141,"up","SLC23A2",9962.0,"0006139 // nucleobase-containing compound metabolic process // traceable author statement /// 0006766 // vitamin metabolic process // traceable author statement /// 0006767 // water-soluble vitamin metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0015851 // nucleobase transport // traceable author statement /// 0015882 // L-ascorbic acid transport // inferred from direct assay /// 0015882 // L-ascorbic acid transport // inferred from electronic annotation /// 0015993 // molecular hydrogen transport // non-traceable author statement /// 0019852 // L-ascorbic acid metabolic process // non-traceable author statement /// 0019852 // L-ascorbic acid metabolic process // traceable author statement /// 0019852 // L-ascorbic acid metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0070904 // transepithelial L-ascorbic acid transport // inferred from direct assay","0005624 // membrane fraction // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0009925 // basal plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from direct assay /// 0016324 // apical plasma membrane // inferred from direct assay","0005215 // transporter activity // inferred from electronic annotation /// 0008520 // L-ascorbate:sodium symporter activity // inferred from electronic annotation /// 0008523 // sodium-dependent multivitamin transmembrane transporter activity // non-traceable author statement /// 0015205 // nucleobase transmembrane transporter activity // traceable author statement /// 0015229 // L-ascorbic acid transporter activity // inferred from direct assay /// 0015229 // L-ascorbic acid transporter activity // inferred from electronic annotation /// 0015293 // symporter activity // inferred from electronic annotation /// 0070890 // sodium-dependent L-ascorbate transmembrane transporter activity // inferred from direct assay","chr20:4850234-4951562 (-) // 94.17 // p13"]
["11733726_a_at",-0.11697388,0.0016102791,-0.272501,0.04866934,0.07099533,-0.0016102791,0.47447816,0.10955988,-1.1239982,-0.16863967,1.1239982,"down","SNAP25",6616.0,"0001504 // neurotransmitter uptake // non-traceable author statement /// 0006112 // energy reserve metabolic process // traceable author statement /// 0007268 // synaptic transmission // non-traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007269 // neurotransmitter secretion // non-traceable author statement /// 0007269 // neurotransmitter secretion // traceable author statement /// 0007269 // neurotransmitter secretion // inferred from electronic annotation /// 0007409 // axonogenesis // inferred from electronic annotation /// 0007616 // long-term memory // inferred from electronic annotation /// 0014047 // glutamate secretion // traceable author statement /// 0016081 // synaptic vesicle docking involved in exocytosis // non-traceable author statement /// 0016197 // endosomal transport // inferred from electronic annotation /// 0030252 // growth hormone secretion // inferred from electronic annotation /// 0030431 // sleep // inferred from electronic annotation /// 0032024 // positive regulation of insulin secretion // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046887 // positive regulation of hormone secretion // inferred from electronic annotation /// 0048791 // calcium ion-dependent exocytosis of neurotransmitter // inferred from electronic annotation /// 0050796 // regulation of insulin secretion // traceable author statement /// 0051963 // regulation of synapse assembly // inferred from electronic annotation","0005625 // soluble fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0008076 // voltage-gated potassium channel complex // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030175 // filopodium // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030426 // growth cone // inferred from sequence or structural similarity /// 0030426 // growth cone // inferred from electronic annotation /// 0031201 // SNARE complex // inferred from sequence or structural similarity /// 0031201 // SNARE complex // inferred from electronic annotation /// 0043005 // neuron projection // inferred from sequence or structural similarity /// 0043005 // neuron projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043229 // intracellular organelle // inferred from electronic annotation /// 0044295 // axonal growth cone // inferred from electronic annotation /// 0045121 // membrane raft // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0070032 // synaptobrevin 2-SNAP-25-syntaxin-1a-complexin I complex // inferred from electronic annotation /// 0070044 // synaptobrevin 2-SNAP-25-syntaxin-1a complex // inferred from electronic annotation","0000149 // SNARE binding // inferred from electronic annotation /// 0005249 // voltage-gated potassium channel activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0017022 // myosin binding // inferred from electronic annotation /// 0017075 // syntaxin-1 binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from electronic annotation","chr20:10199473-10288065 (+) // 94.92 // p12.2"]
["11719702_a_at",0.05413294,0.07286692,-0.022864819,-0.058176517,-0.040091038,0.022864342,0.5785284,0.19250314,1.0423546,0.05984613,1.0423546,"up","FARP1",10160.0,"0010923 // negative regulation of phosphatase activity // inferred from direct assay /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005856 // cytoskeleton // traceable author statement /// 0019898 // extrinsic to membrane // inferred from electronic annotation","0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // traceable author statement /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0008092 // cytoskeletal protein binding // inferred from electronic annotation","chr13:98795363-99102023 (+) // 94.6 // q32.2"]
["11743917_a_at",0.17798805,0.13900423,0.16436815,-0.2108264,-0.16518116,-0.1390047,0.054926757,1.5530396E-4,1.2588656,0.33212426,1.2588656,"up","FKBP5",2289.0,"0000413 // protein peptidyl-prolyl isomerization // not recorded /// 0000413 // protein peptidyl-prolyl isomerization // inferred from electronic annotation /// 0006457 // protein folding // inferred from electronic annotation /// 0006457 // protein folding // traceable author statement /// 0018208 // peptidyl-proline modification // not recorded","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // not recorded","0003755 // peptidyl-prolyl cis-trans isomerase activity // not recorded /// 0003755 // peptidyl-prolyl cis-trans isomerase activity // inferred from electronic annotation /// 0005528 // FK506 binding // not recorded /// 0005528 // FK506 binding // traceable author statement /// 0016853 // isomerase activity // inferred from electronic annotation /// 0031072 // heat shock protein binding // inferred from physical interaction","chr6:35540716-35696360 (-) // 88.54 // p21.31"]
["11736807_at",0.012316465,-0.012316704,-0.01578021,0.09871507,-0.13728905,0.016004562,0.9928607,0.9756547,1.0015699,0.0022630636,1.0015699,"up","GABRA4",2557.0,"0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006821 // chloride transport // inferred from electronic annotation /// 0007214 // gamma-aminobutyric acid signaling pathway // inferred from electronic annotation /// 0007214 // gamma-aminobutyric acid signaling pathway // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007417 // central nervous system development // inferred from electronic annotation /// 0034220 // ion transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 2001023 // regulation of response to drug // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0034707 // chloride channel complex // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004890 // GABA-A receptor activity // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005230 // extracellular ligand-gated ion channel activity // inferred from electronic annotation /// 0005254 // chloride channel activity // inferred from electronic annotation /// 0008503 // benzodiazepine receptor activity // traceable author statement","chr4:46920916-46996424 (-) // 83.89 // p12"]
["11746675_a_at",0.040351868,0.13551569,-0.10281372,-0.04035139,-0.20273972,0.05643797,0.7674036,0.4460713,1.061842,0.08656906,1.061842,"up","ZNF232",7775.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016032 // viral reproduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:5009223-5026411 (-) // 91.98 // p13.2"]
["11735858_a_at",-0.0024306774,0.0024309158,0.17028594,-0.10928631,0.04964304,-0.11575699,0.6031807,0.21565294,1.0831468,0.1152288,1.0831468,"up","RIIAD1",284485.0,"0007165 // signal transduction // inferred from electronic annotation","","0008603 // cAMP-dependent protein kinase regulator activity // inferred from electronic annotation","chr1:151694074-151702076 (+) // 81.82 // q21.3"]
["11734878_at",0.030529976,0.062483072,-0.094511986,0.21069169,-0.030529976,-0.030771017,0.85607517,0.6196273,-1.0354778,-0.050296564,1.0354778,"down","TMEM30B",161291.0,"0070863 // positive regulation of protein exit from endoplasmic reticulum // inferred from direct assay","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr14:61744087-61748558 (-) // 92.78 // q23.1"]
["11754921_a_at",-0.073571205,0.06038332,-0.069904804,0.12989044,-0.06038332,0.08711004,0.6949469,0.33250928,-1.0569472,-0.07990335,1.0569472,"down","TMEM168",64418.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030133 // transport vesicle // inferred from direct assay","","chr7:112407140-112430448 (-) // 99.25 // q31.1"]
["11764075_at",0.09964752,-0.006361723,0.16002202,0.006361723,-0.09351921,-0.18743777,0.4192104,0.076513164,1.1297219,0.17596765,1.1297219,"up","","","","","","chr10:48382335-48382847 (+) // 17.3 // q11.22"]
["AFFX-BkGr-GC21_at",-0.021260262,0.019353867,-0.07928753,-0.017930984,0.061992645,0.017930508,0.6422963,0.26427516,-1.0336363,-0.047728684,1.0336363,"down",-0.017930984,0.061992645,0.017930508,-0.021260262,0.019353867,-0.07928753]
["11719396_a_at",-0.087732315,-0.03476715,0.020421028,-0.0012750626,0.08576727,0.0012745857,0.60058916,0.21327192,-1.0443571,-0.062615044,1.0443571,"down","EXTL2",2135.0,"0006044 // N-acetylglucosamine metabolic process // inferred from direct assay /// 0015012 // heparan sulfate proteoglycan biosynthetic process // inferred from electronic annotation /// 0019276 // UDP-N-acetylgalactosamine metabolic process // inferred from direct assay","0005576 // extracellular region // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031227 // intrinsic to endoplasmic reticulum membrane // inferred from electronic annotation","0001888 // glucuronyl-galactosyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity // inferred from direct assay /// 0001888 // glucuronyl-galactosyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0016758 // transferase activity, transferring hexosyl groups // inferred from electronic annotation /// 0035248 // alpha-1,4-N-acetylgalactosaminyltransferase activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:101337942-101361558 (-) // 94.11 // p21.2"]
["11752772_a_at",-0.008822441,0.06664801,-0.34154868,0.10418463,0.008822441,-0.041461468,0.75389475,0.42186552,-1.0855476,-0.11842294,1.0855476,"down","KLHL3",26249.0,"0016567 // protein ubiquitination // inferred from electronic annotation /// 0016567 // protein ubiquitination // traceable author statement /// 0070294 // renal sodium ion absorption // inferred from mutant phenotype /// 0072156 // distal tubule morphogenesis // inferred from mutant phenotype","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0031463 // Cul3-RING ubiquitin ligase complex // traceable author statement","0003779 // actin binding // inferred from electronic annotation /// 0005198 // structural molecule activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr5:136957627-137042116 (-) // 99.87 // q31.2"]
["11740464_a_at",-0.18999672,0.013143063,-0.20995903,0.021234035,-0.013143063,0.13133287,0.4643318,0.10367885,-1.129287,-0.1754122,1.129287,"down","PLCH1",23007.0,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0016042 // lipid catabolic process // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0048015 // phosphatidylinositol-mediated signaling // inferred from direct assay","0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0004435 // phosphatidylinositol phospholipase C activity // inferred from electronic annotation /// 0004629 // phospholipase C activity // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0008081 // phosphoric diester hydrolase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050429 // calcium-dependent phospholipase C activity // inferred from direct assay","chr3:155197670-155394205 (-) // 98.98 // q25.31"]
["11744568_at",0.026847124,-0.0060768127,-0.07280803,-0.035888672,0.0060768127,0.022119522,0.8862612,0.68646866,-1.0102986,-0.0147817675,1.0102986,"down","STGC3",474171.0,"","","","chr3:49297517-49298811 (+) // 75.19 // p21.31"]
["11719241_x_at",-0.032596588,0.008446217,-0.2629919,-0.008446693,0.015861988,0.103633404,0.6050353,0.21874513,-1.0963666,-0.13273033,1.0963666,"down","CAMK2N1",55450.0,"0006469 // negative regulation of protein kinase activity // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0004860 // protein kinase inhibitor activity // inferred from electronic annotation /// 0008427 // calcium-dependent protein kinase inhibitor activity // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation","chr1:20808883-20812728 (-) // 67.48 // p36.12"]
["11745699_a_at",0.013198614,0.009167671,0.08300328,-0.009167671,-0.08359885,-0.035316706,0.4148869,0.07421257,1.0554203,0.07781761,1.0554203,"up","KLRF1",51348.0,"0007166 // cell surface receptor signaling pathway // traceable author statement","0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // traceable author statement /// 0030246 // carbohydrate binding // inferred from electronic annotation /// 0032393 // MHC class I receptor activity // traceable author statement","chr12:9980116-9997256 (+) // 100.0 // p13.31"]
["11741329_x_at",0.23699641,0.0086119175,-0.035162926,-0.0086119175,0.05542016,-0.11935043,0.7344012,0.39297417,1.0675689,0.09432918,1.0675689,"up","GAGE1",2543.0,"0006968 // cellular defense response // traceable author statement","","","chrX:49363615-49370958 (+) // 66.53 // p11.23"]
["11750174_a_at",0.009739399,-0.009739399,0.06912804,0.019079447,-0.030398369,-0.051628113,0.62068313,0.236539,1.0309862,0.044025008,1.0309862,"up","LOC645954",645954.0,"","","0003779 // actin binding // inferred from electronic annotation","chr10:30984849-31005942 (+) // 94.02 // p11.23"]
["11722617_at",0.026910782,-0.04240036,-0.026041508,0.026041508,0.05337715,-0.090513706,0.9492569,0.84554833,-1.007057,-0.010145273,1.007057,"down","RIPK4",54101.0,"0002009 // morphogenesis of an epithelium // inferred from mutant phenotype /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from direct assay /// 0016310 // phosphorylation // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005524 // ATP binding // non-traceable author statement /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr21:43159532-43187282 (-) // 98.76 // q22.3"]
["11730810_at",-0.008555889,0.1808064,0.008555889,-0.19010425,-0.1294055,0.25332808,0.85450214,0.615489,1.0587261,0.08232936,1.0587261,"up","LRRTM2",26045.0,"","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","","chr5:138204674-138211057 (-) // 99.14 // q31.2"]
["11748480_a_at",-0.052177906,0.0019497871,-0.106266975,0.056228638,0.11283064,-0.0019497871,0.41998962,0.0769324,-1.0776347,-0.1078682,1.0776347,"down","TTYH2",94015.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006821 // chloride transport // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0034707 // chloride channel complex // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005254 // chloride channel activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr17:72211756-72256790 (+) // 99.21 // q25.1"]
["11753924_a_at",0.037083626,0.010225296,0.10506153,-0.010225296,-0.024217606,-0.014432907,0.42258888,0.07836565,1.0475957,0.0670821,1.0475957,"up","ATG3",64422.0,"0000045 // autophagic vacuole assembly // inferred from sequence or structural similarity /// 0000045 // autophagic vacuole assembly // inferred from electronic annotation /// 0006464 // cellular protein modification process // inferred from direct assay /// 0006612 // protein targeting to membrane // inferred from sequence or structural similarity /// 0006810 // transport // inferred from electronic annotation /// 0006914 // autophagy // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from direct assay /// 0043653 // mitochondrial fragmentation involved in apoptotic process // inferred from sequence or structural similarity /// 0043653 // mitochondrial fragmentation involved in apoptotic process // inferred from electronic annotation","0000153 // cytoplasmic ubiquitin ligase complex // inferred from physical interaction /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0016874 // ligase activity // inferred from electronic annotation /// 0019776 // Atg8 ligase activity // inferred from sequence or structural similarity /// 0019776 // Atg8 ligase activity // inferred from electronic annotation /// 0019777 // Atg12 ligase activity // inferred from sequence or structural similarity /// 0019777 // Atg12 ligase activity // inferred from electronic annotation /// 0019787 // small conjugating protein ligase activity // inferred from direct assay /// 0019899 // enzyme binding // inferred from physical interaction","chr3:112251391-112280748 (-) // 95.01 // q13.2"]
["11718526_a_at",-0.011434078,0.0018677711,-0.15532398,-0.0018677711,0.16238737,0.075101376,0.49901053,0.12579146,-1.0969546,-0.1335038,1.0969546,"down","ESRRA",2101.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0030278 // regulation of ossification // inferred from electronic annotation /// 0030522 // intracellular receptor mediated signaling pathway // traceable author statement /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0043401 // steroid hormone mediated signaling pathway // inferred from electronic annotation /// 0045667 // regulation of osteoblast differentiation // inferred from electronic annotation /// 0045670 // regulation of osteoclast differentiation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0051216 // cartilage development // inferred from electronic annotation","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003707 // steroid hormone receptor activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004879 // ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity // traceable author statement /// 0005496 // steroid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:64072999-64084215 (+) // 94.19 // q13.1"]
["11740504_at",-0.09491849,0.05091262,0.042220116,-0.22795558,-0.017515182,0.017515182,0.76962423,0.44952008,1.0536457,0.07538987,1.0536457,"up","ZNF680",340252.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:63985576-64023505 (-) // 40.43 // q11.21"]
["11723589_at",-0.028235435,-0.051721096,-0.076818466,0.18386555,0.028235435,0.11980009,0.28447893,0.026181621,-1.1195291,-0.16289206,1.1195291,"down","RC3H1",149041.0,"0000956 // nuclear-transcribed mRNA catabolic process // inferred from sequence or structural similarity /// 0000956 // nuclear-transcribed mRNA catabolic process // inferred from electronic annotation /// 0002634 // regulation of germinal center formation // inferred from sequence or structural similarity /// 0002634 // regulation of germinal center formation // inferred from electronic annotation /// 0002635 // negative regulation of germinal center formation // inferred from sequence or structural similarity /// 0002635 // negative regulation of germinal center formation // inferred from electronic annotation /// 0010608 // posttranscriptional regulation of gene expression // inferred from sequence or structural similarity /// 0010608 // posttranscriptional regulation of gene expression // inferred from electronic annotation /// 0016567 // protein ubiquitination // traceable author statement /// 0030889 // negative regulation of B cell proliferation // inferred from sequence or structural similarity /// 0030889 // negative regulation of B cell proliferation // inferred from electronic annotation /// 0033962 // cytoplasmic mRNA processing body assembly // inferred from sequence or structural similarity /// 0033962 // cytoplasmic mRNA processing body assembly // inferred from electronic annotation /// 0043488 // regulation of mRNA stability // inferred from sequence or structural similarity /// 0043488 // regulation of mRNA stability // inferred from electronic annotation /// 0045623 // negative regulation of T-helper cell differentiation // inferred from sequence or structural similarity /// 0045623 // negative regulation of T-helper cell differentiation // inferred from electronic annotation /// 0046007 // negative regulation of activated T cell proliferation // inferred from sequence or structural similarity /// 0046007 // negative regulation of activated T cell proliferation // inferred from electronic annotation /// 0050856 // regulation of T cell receptor signaling pathway // inferred from sequence or structural similarity /// 0050856 // regulation of T cell receptor signaling pathway // inferred from electronic annotation","0000932 // cytoplasmic mRNA processing body // inferred from sequence or structural similarity /// 0000932 // cytoplasmic mRNA processing body // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0010494 // cytoplasmic stress granule // inferred from sequence or structural similarity /// 0010494 // cytoplasmic stress granule // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003730 // mRNA 3'-UTR binding // inferred from sequence or structural similarity /// 0003730 // mRNA 3'-UTR binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein ligase activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:173900223-173962345 (-) // 96.48 // q25.1"]
["11734729_a_at",-0.113315105,0.028025866,0.0,0.0,0.024491787,-0.028026104,0.8393232,0.58380824,-1.019069,-0.027251676,1.019069,"down","SLC39A12",221074.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006829 // zinc ion transport // inferred from electronic annotation /// 0030001 // metal ion transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0046873 // metal ion transmembrane transporter activity // inferred from electronic annotation","chr10:18240767-18332212 (+) // 98.53 // p12.33"]
["11732496_a_at",-0.027618885,0.021882534,0.022583485,0.03290081,-0.021882534,-0.029445171,0.8796587,0.67140424,1.0081834,0.011758048,1.0081834,"up","AP1S3",130340.0,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006892 // post-Golgi vesicle-mediated transport // traceable author statement /// 0006897 // endocytosis // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016032 // viral reproduction // traceable author statement /// 0016044 // cellular membrane organization // traceable author statement /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0050690 // regulation of defense response to virus by virus // traceable author statement","0000139 // Golgi membrane // traceable author statement /// 0005765 // lysosomal membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005905 // coated pit // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030117 // membrane coat // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // traceable author statement /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0008565 // protein transporter activity // inferred from electronic annotation","chr2:224620046-224702452 (-) // 66.32 // q36.1"]
["11732011_at",0.018954515,-0.018954039,0.017907381,-0.18031812,0.019942284,-0.017907381,0.7105224,0.3556702,1.0463729,0.06539707,1.0463729,"up","TNFAIP8L3",388121.0,"","","","chr15:51348797-51397473 (-) // 78.83 // q21.2"]
["11734867_a_at",0.028362274,0.028697968,-0.028729916,0.07929754,-0.028362513,-0.16676974,0.82422155,0.5501104,1.0338702,0.048055097,1.0338702,"up","LOC100505861 /// TPRG1","100505861 /// 285386","","0005737 // cytoplasm // inferred from electronic annotation","","chr3:188889762-189041347 (+) // 75.84 // q28"]
["11739060_s_at",-0.057349205,-0.09043789,-0.0065164566,0.039772034,0.0065164566,0.03375721,0.33860156,0.041892525,-1.0556389,-0.07811643,1.0556389,"down","SLC7A5",8140.0,"0003333 // amino acid transmembrane transport // inferred from sequence or structural similarity /// 0003333 // amino acid transmembrane transport // inferred from electronic annotation /// 0006520 // cellular amino acid metabolic process // traceable author statement /// 0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006865 // amino acid transport // traceable author statement /// 0006865 // amino acid transport // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0015804 // neutral amino acid transport // inferred from sequence or structural similarity /// 0015804 // neutral amino acid transport // traceable author statement /// 0015807 // L-amino acid transport // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0050900 // leukocyte migration // traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation","0015171 // amino acid transmembrane transporter activity // inferred from sequence or structural similarity /// 0015171 // amino acid transmembrane transporter activity // inferred from electronic annotation /// 0015175 // neutral amino acid transmembrane transporter activity // traceable author statement /// 0015179 // L-amino acid transmembrane transporter activity // inferred from electronic annotation /// 0042605 // peptide antigen binding // inferred from sequence or structural similarity","chr16:87863628-87903105 (-) // 92.7 // q24.2"]
["11742067_s_at",0.034520864,0.0023956299,-0.03562641,-0.17165494,0.0678072,-0.0023956299,0.87140715,0.65303934,1.0251567,0.0358445,1.0251567,"up","LRRTM4",80059.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr2:76974851-77749502 (-) // 98.64 // p12"]
["11743847_x_at",-0.10872555,-0.17182541,-0.046566963,0.117669106,0.17695332,0.046566963,0.21895388,0.01300111,-1.1669713,-0.22276911,1.1669713,"down","CFH",3075.0,"0006956 // complement activation // traceable author statement /// 0006957 // complement activation, alternative pathway // inferred from electronic annotation /// 0030449 // regulation of complement activation // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement","","chr1:196620883-196716632 (+) // 96.79 // q31.3"]
["11759240_x_at",0.019613028,-0.11477232,0.046849728,-0.104067326,0.019613028,-0.019613028,0.92566466,0.7788184,1.0129662,0.018585972,1.0129662,"up","PCDHGA8",9708.0,"0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr5:140769385-140776198 (+) // 89.15 // q31.3"]
["11723039_x_at",-0.015203476,0.027303696,0.015203476,-0.019929886,0.01875019,-0.06922054,0.6829458,0.31576774,1.0228311,0.032567907,1.0228311,"up","SRSF3",6428.0,"0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0031124 // mRNA 3'-end processing // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0016607 // nuclear speck // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0043274 // phospholipase binding // inferred from electronic annotation","chr6:36562089-36572244 (+) // 95.77 // p21.31"]
["11747978_a_at",0.049632072,0.042075157,-0.13998699,0.07400417,-0.042075157,-0.0679059,0.9876092,0.95945144,-1.0028466,-0.0041009397,1.0028466,"down","MYRIP",25924.0,"0006886 // intracellular protein transport // inferred from electronic annotation /// 0032024 // positive regulation of insulin secretion // inferred from sequence or structural similarity","0001750 // photoreceptor outer segment // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0030133 // transport vesicle // inferred from electronic annotation /// 0031045 // dense core granule // inferred from sequence or structural similarity /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // non-traceable author statement /// 0017022 // myosin binding // inferred from electronic annotation /// 0017137 // Rab GTPase binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:40141501-40299833 (+) // 99.96 // p22.1"]
["11742223_a_at",0.16678524,0.061201096,0.26147223,-0.061201572,-0.14182138,-0.17276001,0.21566616,0.012419435,1.2212968,0.28841382,1.2212968,"up","NOP14",8602.0,"0000447 // endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) // inferred from sequence or structural similarity /// 0000462 // maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) // inferred from sequence or structural similarity /// 0000472 // endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) // inferred from sequence or structural similarity /// 0000480 // endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) // inferred from sequence or structural similarity /// 0006364 // rRNA processing // inferred from sequence or structural similarity /// 0006364 // rRNA processing // inferred from electronic annotation /// 0042254 // ribosome biogenesis // inferred from electronic annotation /// 0042274 // ribosomal small subunit biogenesis // inferred from sequence or structural similarity","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from sequence or structural similarity /// 0005730 // nucleolus // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from sequence or structural similarity /// 0030686 // 90S preribosome // inferred from sequence or structural similarity /// 0030692 // Noc4p-Nop14p complex // inferred from sequence or structural similarity /// 0032040 // small-subunit processome // inferred from sequence or structural similarity","0030515 // snoRNA binding // inferred from sequence or structural similarity","chr4:2939665-2965118 (-) // 97.99 // p16.3"]
["11739255_x_at",-0.07143736,-0.007814407,0.1092968,-0.06465483,0.1498847,0.007814407,0.9371797,0.8111599,-1.0146624,-0.02099977,1.0146624,"down","FAM84B",157638.0,"","0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr8:127564682-127570706 (-) // 94.05 // q24.21"]
["11725098_s_at",0.058643818,-0.039176464,-0.21245718,0.06765747,0.039176464,-0.054130554,0.7407821,0.4016975,-1.0584093,-0.08189769,1.0584093,"down","RABL3",285282.0,"0007264 // small GTPase mediated signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation","chr3:120405529-120461384 (-) // 75.98 // q13.33"]
["11744276_a_at",-0.087304115,-0.051351547,-0.07807732,0.09705639,0.051351547,0.11806202,0.113419406,0.0019987794,-1.1181142,-0.16106759,1.1181142,"down","CAPG",822.0,"0006461 // protein complex assembly // non-traceable author statement /// 0030031 // cell projection assembly // inferred from electronic annotation /// 0051016 // barbed-end actin filament capping // traceable author statement /// 0051693 // actin filament capping // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0008290 // F-actin capping protein complex // traceable author statement /// 0031965 // nuclear membrane // inferred from direct assay /// 0042470 // melanosome // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation","chr2:85621889-85637820 (-) // 95.71 // p11.2"]
["11725525_at",0.008071899,-0.05393982,0.046300888,-0.008071899,-0.08493233,0.023381233,0.856008,0.61947286,1.0163181,0.023352,1.0163181,"up","DSG2",1829.0,"0006915 // apoptotic process // inferred from direct assay /// 0006915 // apoptotic process // traceable author statement /// 0006921 // cellular component disassembly involved in apoptotic process // traceable author statement /// 0007155 // cell adhesion // inferred from direct assay /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from electronic annotation /// 0097194 // execution phase of apoptosis // inferred from direct assay","0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005911 // cell-cell junction // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030057 // desmosome // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr18:29078026-29128971 (+) // 90.77 // q12.1"]
["11754578_x_at",-0.017723083,0.062139988,-0.018809795,0.05944848,0.0023722649,-0.0023722649,0.9143568,0.7522706,-1.0078497,-0.011280497,1.0078497,"down","C1orf101",257044.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr1:244624712-244803658 (+) // 98.35 // q44"]
["11743509_a_at",-0.06124735,0.008249283,0.05457115,-0.008249283,0.06008339,-0.055983543,0.9910921,0.969964,1.0013231,0.0019075738,1.0013231,"up","UFL1",23376.0,"0031397 // negative regulation of protein ubiquitination // inferred from direct assay /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from mutant phenotype /// 0071569 // protein ufmylation // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0016874 // ligase activity // inferred from electronic annotation /// 0071568 // UFM1 conjugating enzyme activity // inferred from direct assay","chr6:96969683-97003280 (+) // 97.56 // q16.1"]
["11733446_at",-0.07156086,0.019201279,0.1294713,0.005402565,-0.005402565,-0.03323841,0.8327625,0.5683621,1.0258241,0.036783326,1.0258241,"up","MMS22L",253714.0,"0000724 // double-strand break repair via homologous recombination // inferred from mutant phenotype /// 0006281 // DNA repair // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0031297 // replication fork processing // inferred from mutant phenotype","0005634 // nucleus // inferred from electronic annotation /// 0035101 // FACT complex // inferred from direct assay /// 0042555 // MCM complex // inferred from direct assay /// 0043596 // nuclear replication fork // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr6:97590036-97731052 (-) // 90.35 // q16.1"]
["11715135_s_at",-0.04550886,-0.19430733,-0.031707287,0.031707287,0.113470554,0.037868977,0.38587052,0.06014849,-1.1107417,-0.1515234,1.1107417,"down","SNAPC5",10302.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006383 // transcription from RNA polymerase III promoter // traceable author statement /// 0006384 // transcription initiation from RNA polymerase III promoter // traceable author statement /// 0010467 // gene expression // traceable author statement","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement","chr15:66782665-66790146 (-) // 86.11 // q22.31"]
["11717627_a_at",-0.031956673,-3.900528E-4,0.009478569,-0.01351738,0.081697464,3.900528E-4,0.7380753,0.39766234,-1.0213515,-0.030479396,1.0213515,"down","BIRC2",329.0,"0000209 // protein polyubiquitination // inferred from direct assay /// 0001890 // placenta development // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // traceable author statement /// 0006921 // cellular component disassembly involved in apoptotic process // traceable author statement /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0034121 // regulation of toll-like receptor signaling pathway // traceable author statement /// 0038061 // NIK/NF-kappaB cascade // traceable author statement /// 0039535 // regulation of RIG-I signaling pathway // traceable author statement /// 0042127 // regulation of cell proliferation // traceable author statement /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from expression pattern /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0045088 // regulation of innate immune response // traceable author statement /// 0045595 // regulation of cell differentiation // traceable author statement /// 0050727 // regulation of inflammatory response // traceable author statement /// 0051726 // regulation of cell cycle // inferred from direct assay /// 0070266 // necroptosis // inferred from electronic annotation /// 0070424 // regulation of nucleotide-binding oligomerization domain containing signaling pathway // traceable author statement /// 2000116 // regulation of cysteine-type endopeptidase activity // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0009898 // internal side of plasma membrane // inferred from sequence or structural similarity /// 0009898 // internal side of plasma membrane // inferred from electronic annotation /// 0035631 // CD40 receptor complex // inferred from sequence or structural similarity /// 0035631 // CD40 receptor complex // inferred from electronic annotation","0003713 // transcription coactivator activity // inferred from mutant phenotype /// 0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from physical interaction","chr11:102217663-102249401 (+) // 98.92 // q22.2"]
["11725602_at",0.009209633,0.02329731,0.078681946,-0.07695198,-0.009209633,-0.0360775,0.37173688,0.054727618,1.0554142,0.0778093,1.0554142,"up","DENND5B",160518.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr12:31535160-31743952 (-) // 84.17 // p11.21"]
["11726073_a_at",0.10378218,-0.18449378,0.050933838,-0.11181188,-0.050933838,0.24885511,0.93306935,0.79960185,-1.0271373,-0.038629014,1.0271373,"down","ARHGEF7",8874.0,"0006915 // apoptotic process // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0042059 // negative regulation of epidermal growth factor receptor signaling pathway // traceable author statement /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0043547 // positive regulation of GTPase activity // inferred from direct assay /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0001726 // ruffle // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005925 // focal adhesion // inferred from electronic annotation /// 0005938 // cell cortex // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043005 // neuron projection // inferred from direct assay /// 0043025 // neuronal cell body // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay","0005085 // guanyl-nucleotide exchange factor activity // inferred from direct assay /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction","chr13:111767623-111947542 (+) // 96.56 // q34"]
["11752066_a_at",0.10447121,0.11048126,-0.15261173,-0.10447121,0.13313103,-0.153409,0.86550677,0.64116967,1.0441748,0.062363233,1.0441748,"up","RAI1",10743.0,"0001501 // skeletal system development // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0040015 // negative regulation of multicellular organism growth // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:17685445-17714717 (+) // 95.66 // p11.2"]
["11755284_s_at",0.0087099075,-0.008440971,0.08561134,-0.011404991,0.008440971,-0.04296589,0.63037467,0.24856283,1.0309231,0.04393676,1.0309231,"up","TSPAN13",27075.0,"","0005624 // membrane fraction // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr7:16793327-16824105 (+) // 98.02 // p21.1"]
["11730070_at",-0.024824858,0.06492376,-0.024824858,-0.13784266,0.024824858,0.1334033,0.99533445,0.9848438,-1.0011817,-0.0017038574,1.0011817,"down","KIAA1239",57495.0,"","","","chr4:37246689-37451081 (+) // 97.41 // p14"]
["11725271_a_at",0.07823086,-0.007246971,0.101293564,-0.09988308,0.007246971,-0.16561413,0.41765395,0.07576759,1.1045886,0.14350918,1.1045886,"up","PIGA",5277.0,"0006501 // C-terminal protein lipidation // traceable author statement /// 0006506 // GPI anchor biosynthetic process // traceable author statement /// 0006506 // GPI anchor biosynthetic process // inferred from electronic annotation /// 0009058 // biosynthetic process // inferred from electronic annotation /// 0009893 // positive regulation of metabolic process // traceable author statement /// 0016254 // preassembly of GPI anchor in ER membrane // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0000506 // glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008194 // UDP-glycosyltransferase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0017176 // phosphatidylinositol N-acetylglucosaminyltransferase activity // traceable author statement /// 0017176 // phosphatidylinositol N-acetylglucosaminyltransferase activity // inferred from electronic annotation","chrX:15337577-15350115 (-) // 97.53 // p22.2"]
["11756973_a_at",0.03974247,-0.0070824623,0.16956711,-0.07272005,0.0070819855,-0.08152628,0.49663258,0.12368955,1.0840745,0.1164639,1.0840745,"up","RAD18",56852.0,"0006281 // DNA repair // non-traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0009411 // response to UV // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0045910 // negative regulation of DNA recombination // inferred from electronic annotation","0000785 // chromatin // inferred from electronic annotation /// 0001741 // XY body // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005657 // replication fork // inferred from direct assay","0000403 // Y-form DNA binding // inferred from direct assay /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003684 // damaged DNA binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:8922947-9005115 (-) // 100.0 // p25.3"]
["11720565_a_at",0.10556698,0.08766365,0.12730122,-0.08766365,-0.16626549,-0.13996124,0.08459432,7.641818E-4,1.1794716,0.23814069,1.1794716,"up","NAV2",89797.0,"","0005634 // nucleus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation","chr11:19734880-20143147 (+) // 98.11 // p15.1"]
["11754979_x_at",0.017394066,-0.0062303543,0.09629059,0.0031690598,-0.12387276,-0.0031690598,0.59582734,0.20983931,1.0549021,0.07710908,1.0549021,"up","ARIH2",10425.0,"0000209 // protein polyubiquitination // inferred from direct assay /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0007275 // multicellular organismal development // traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0042787 // protein ubiquitination involved in ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0048588 // developmental cell growth // inferred from direct assay /// 0070534 // protein K63-linked ubiquitination // inferred from direct assay /// 0070936 // protein K48-linked ubiquitination // inferred from direct assay /// 0071425 // hemopoietic stem cell proliferation // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008270 // zinc ion binding // traceable author statement /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:48963947-49021112 (+) // 87.83 // p21.31"]
["11728223_at",-0.10299015,0.012961388,-5.1021576E-4,5.106926E-4,-0.054101467,0.057014465,0.8266419,0.5549709,-1.0219474,-0.03132092,1.0219474,"down","UBE2J1",51465.0,"0016567 // protein ubiquitination // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation","chr6:90036194-90062615 (-) // 92.57 // q15"]
["11732498_at",-0.012571812,0.024916172,-0.02927494,-0.018970966,0.012571812,0.021784306,0.857607,0.62249535,-1.0074944,-0.010771891,1.0074944,"down","HCN2",610.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // traceable author statement /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0006936 // muscle contraction // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007420 // brain development // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0009725 // response to hormone stimulus // inferred from electronic annotation /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0035725 // sodium ion transmembrane transport // inferred from electronic annotation /// 0042391 // regulation of membrane potential // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0045823 // positive regulation of heart contraction // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0071805 // potassium ion transmembrane transport // inferred from electronic annotation","0005624 // membrane fraction // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0008076 // voltage-gated potassium channel complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043198 // dendritic shaft // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005249 // voltage-gated potassium channel activity // inferred from electronic annotation /// 0005261 // cation channel activity // traceable author statement /// 0005267 // potassium channel activity // inferred from electronic annotation /// 0005272 // sodium channel activity // inferred from electronic annotation /// 0030552 // cAMP binding // inferred from electronic annotation /// 0032947 // protein complex scaffold // inferred from electronic annotation","chr19:589892-617159 (+) // 77.3 // p13.3"]
["11763137_at",-0.24489045,0.1284461,0.30481696,0.0041320324,-0.0041320324,-0.02767682,0.88383573,0.680236,1.0511849,0.07201645,1.0511849,"up","HSP90AA6P",441051.0,"0006457 // protein folding // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation","","0005524 // ATP binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // inferred from electronic annotation","chr4:171525947-171526135 (-) // 61.44 // q33"]
["11717551_a_at",-0.010172367,-0.114332676,-0.09455347,0.104194164,0.010172367,0.10549402,0.3032464,0.031125808,-1.1067324,-0.14630638,1.1067324,"down","LOXL1",4016.0,"0018277 // protein deamination // traceable author statement /// 0055114 // oxidation-reduction process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from electronic annotation","0005507 // copper ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016641 // oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr15:74218510-74244477 (+) // 95.99 // q24.1"]
["11750148_a_at",0.045205593,0.1842084,0.04847765,-0.045205593,-0.08668375,-0.094955444,0.2810659,0.025301011,1.1236911,0.16824546,1.1236911,"up","SNED1",25992.0,"0007160 // cell-matrix adhesion // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr2:242002794-242026875 (+) // 95.87 // q37.3"]
["11756759_a_at",0.020123482,0.22750473,-0.035371304,-0.100437164,-0.020123482,0.17443705,0.8784224,0.6680954,1.0372715,0.05279356,1.0372715,"up","IFT172",26160.0,"0001841 // neural tube formation // inferred from electronic annotation /// 0007224 // smoothened signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007368 // determination of left/right symmetry // inferred from electronic annotation /// 0009953 // dorsal/ventral pattern formation // inferred from electronic annotation /// 0016485 // protein processing // inferred from electronic annotation /// 0042384 // cilium assembly // inferred from sequence or structural similarity /// 0042384 // cilium assembly // inferred from electronic annotation","0005929 // cilium // inferred from sequence or structural similarity /// 0005929 // cilium // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","","chr2:27693679-27712545 (-) // 97.87 // p23.3"]
["11753037_x_at",-0.13446212,0.039676428,-0.029290915,-0.07072139,0.21865463,0.029291153,0.7179778,0.3669037,-1.0720956,-0.1004336,1.0720956,"down","ANKS1B",56899.0,"","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0015030 // Cajal body // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0046875 // ephrin receptor binding // inferred from physical interaction","chr12:99139516-99548270 (-) // 100.0 // q23.1"]
["11739263_x_at",-0.119419575,-0.25163555,0.22959518,-0.010205746,0.2107706,0.010205746,0.80000144,0.50355774,-1.0847858,-0.11741022,1.0847858,"down","VPS4B",9525.0,"0006200 // ATP catabolic process // inferred from direct assay /// 0006200 // ATP catabolic process // inferred from mutant phenotype /// 0006810 // transport // inferred from electronic annotation /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0007032 // endosome organization // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016044 // cellular membrane organization // traceable author statement /// 0016197 // endosomal transport // inferred from direct assay /// 0016197 // endosomal transport // inferred from mutant phenotype /// 0016197 // endosomal transport // traceable author statement /// 0030301 // cholesterol transport // inferred from electronic annotation /// 0032367 // intracellular cholesterol transport // inferred from mutant phenotype /// 0032510 // endosome to lysosome transport via multivesicular body sorting pathway // inferred from mutant phenotype /// 0033993 // response to lipid // inferred from direct assay /// 0051301 // cell division // inferred from electronic annotation","0005622 // intracellular // inferred from mutant phenotype /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005764 // lysosome // inferred from direct assay /// 0005768 // endosome // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0005770 // late endosome // inferred from direct assay /// 0005774 // vacuolar membrane // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0031902 // late endosome membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from mutant phenotype /// 0005524 // ATP binding // inferred from electronic annotation /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0016887 // ATPase activity // inferred from direct assay /// 0016887 // ATPase activity // inferred from mutant phenotype /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0042623 // ATPase activity, coupled // non-traceable author statement","chr18:61056426-61089752 (-) // 89.46 // q21.33"]
["11741460_s_at",-0.055384636,0.16053629,-0.007153511,0.22265387,0.007153511,-0.058237076,0.943942,0.8302006,-1.0171441,-0.02452406,1.0171441,"down","CYP4A11",1579.0,"0001676 // long-chain fatty acid metabolic process // inferred from direct assay /// 0003091 // renal water homeostasis // inferred from expression pattern /// 0003095 // pressure natriuresis // inferred from expression pattern /// 0006631 // fatty acid metabolic process // traceable author statement /// 0006691 // leukotriene metabolic process // inferred from direct assay /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0019369 // arachidonic acid metabolic process // inferred from direct assay /// 0019373 // epoxygenase P450 pathway // inferred from direct assay /// 0032305 // positive regulation of icosanoid secretion // inferred from mutant phenotype /// 0036101 // leukotriene B4 catabolic process // inferred from direct assay /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055078 // sodium ion homeostasis // inferred from expression pattern /// 0055114 // oxidation-reduction process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from direct assay /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from direct assay","0004497 // monooxygenase activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from electronic annotation /// 0008392 // arachidonic acid epoxygenase activity // inferred from direct assay /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016705 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen // inferred from electronic annotation /// 0018685 // alkane 1-monooxygenase activity // inferred from direct assay /// 0018685 // alkane 1-monooxygenase activity // inferred from electronic annotation /// 0018685 // alkane 1-monooxygenase activity // traceable author statement /// 0020037 // heme binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050051 // leukotriene-B4 20-monooxygenase activity // inferred from direct assay /// 0052869 // arachidonic acid omega-hydroxylase activity // inferred from electronic annotation","chr1:47603096-47615407 (+) // 66.27 // p33 /// chr1:47394851-47407166 (-) // 64.36 // p33"]
["11733205_a_at",0.15624428,0.02235508,0.0896759,-0.02235508,-0.18890476,-0.18201494,0.29791987,0.029813165,1.1651508,0.22051664,1.1651508,"up","AFAP1L1",134265.0,"","0002102 // podosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0071437 // invadopodium // inferred from electronic annotation","0005543 // phospholipid binding // inferred from electronic annotation","chr5:148651400-148721365 (+) // 86.7 // q32"]
["11757944_s_at",-0.010727882,0.010727882,-0.015480995,0.046312332,-0.030947685,0.086494446,0.69374025,0.33109084,-1.0274822,-0.03911333,1.0274822,"down","SMCR7L",54471.0,"0008053 // mitochondrial fusion // inferred from mutant phenotype","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from direct assay /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr22:39913105-39914138 (+) // 96.72 // q13.1"]
["11725485_at",0.31999326,0.27349305,-0.0039043427,-0.07413483,-0.060371876,0.0039043427,0.4287477,0.08205021,1.1810429,0.24006137,1.1810429,"up","DIRC2",84925.0,"0006810 // transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr3:122513641-122600032 (+) // 96.32 // q21.1"]
["11745889_a_at",0.048654556,-0.048654556,-0.079422,-0.193964,0.08728886,0.061829567,0.9721287,0.91182697,-1.0080209,-0.01152552,1.0080209,"down","KIDINS220",57498.0,"0000186 // activation of MAPKK activity // traceable author statement /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048813 // dendrite morphogenesis // inferred from electronic annotation","0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0016301 // kinase activity // inferred from electronic annotation","chr2:8869058-8911309 (-) // 98.17 // p25.1"]
["11727900_at",-0.19626045,0.068505764,-0.043895006,0.15403724,-0.05239606,0.043895006,0.6984407,0.33774582,-1.0760376,-0.10572855,1.0760376,"down","DMRT1",1761.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0000902 // cell morphogenesis // inferred from electronic annotation /// 0002176 // male germ cell proliferation // inferred from sequence or structural similarity /// 0003006 // developmental process involved in reproduction // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0007530 // sex determination // traceable author statement /// 0007548 // sex differentiation // inferred from electronic annotation /// 0008354 // germ cell migration // inferred from electronic annotation /// 0008584 // male gonad development // traceable author statement /// 0008584 // male gonad development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030238 // male sex determination // inferred from sequence or structural similarity /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0045835 // negative regulation of meiosis // inferred from sequence or structural similarity /// 0045840 // positive regulation of mitosis // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0046661 // male sex differentiation // inferred from sequence or structural similarity /// 0060008 // Sertoli cell differentiation // inferred from sequence or structural similarity /// 0060008 // Sertoli cell differentiation // inferred from electronic annotation","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation","0000987 // core promoter proximal region sequence-specific DNA binding // inferred from sequence or structural similarity /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:841644-969090 (+) // 96.33 // p24.3"]
["11721878_x_at",-0.02230835,-0.030150414,0.10055256,-0.014890671,0.014890671,0.017638206,0.9427819,0.8272521,1.0070616,0.010151934,1.0070616,"up","MT1F",4494.0,"0045926 // negative regulation of growth // inferred from sequence or structural similarity /// 0071276 // cellular response to cadmium ion // inferred from expression pattern /// 0071294 // cellular response to zinc ion // inferred from sequence or structural similarity","0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // non-traceable author statement /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity","0005507 // copper ion binding // non-traceable author statement /// 0008270 // zinc ion binding // inferred from sequence or structural similarity /// 0008270 // zinc ion binding // non-traceable author statement /// 0046870 // cadmium ion binding // non-traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:56691605-56693473 (+) // 84.83 // q12.2"]
["11738309_at",-0.060378075,-0.31550264,0.060378313,0.12221217,-0.13771057,0.08173752,0.7431845,0.40585893,-1.0922077,-0.12724718,1.0922077,"down","SHANK2",22941.0,"0007420 // brain development // inferred from electronic annotation /// 0035556 // intracellular signal transduction // non-traceable author statement","0005622 // intracellular // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from electronic annotation /// 0008328 // ionotropic glutamate receptor complex // inferred from sequence or structural similarity /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0019717 // synaptosome // inferred from sequence or structural similarity /// 0030054 // cell junction // inferred from electronic annotation /// 0030426 // growth cone // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from sequence or structural similarity /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from sequence or structural similarity /// 0045211 // postsynaptic membrane // inferred from electronic annotation /// 0060170 // cilium membrane // inferred from sequence or structural similarity","0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0030160 // GKAP/Homer scaffold activity // non-traceable author statement /// 0035255 // ionotropic glutamate receptor binding // inferred from sequence or structural similarity","chr11:70335117-70507945 (-) // 99.53 // q13.3"]
["11725638_a_at",0.053560257,0.055791855,0.027561188,-0.04228115,-0.027561188,-0.049981117,0.10520927,0.0015740389,1.0611135,0.08557895,1.0611135,"up","EIF3J",8669.0,"0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred by curator /// 0006413 // translational initiation // traceable author statement /// 0006413 // translational initiation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005852 // eukaryotic translation initiation factor 3 complex // inferred from direct assay","0003743 // translation initiation factor activity // inferred by curator /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr15:44829254-44855001 (+) // 91.33 // q21.1"]
["11736969_at",-0.20641208,-0.3610921,0.1747849,-0.03532958,0.03532958,0.32991362,0.6579934,0.2834558,-1.1817113,-0.24087763,1.1817113,"down","TMEM213",155006.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr7:138482696-138490767 (+) // 77.55 // q34"]
["11751415_a_at",0.006627083,0.049075127,0.03367901,-0.050221443,-0.12070942,-0.006627083,0.39895287,0.06618927,1.0636177,0.0889797,1.0636177,"up","TSC22D3",1831.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from electronic annotation /// 0006970 // response to osmotic stress // inferred from electronic annotation /// 0007589 // body fluid secretion // inferred from electronic annotation /// 0048642 // negative regulation of skeletal muscle tissue development // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0043426 // MRF binding // inferred from electronic annotation","chrX:106957213-107018890 (-) // 99.77 // q22.3"]
["11751724_a_at",0.04583931,0.0070967674,-0.042993307,-0.007097006,-0.09655285,0.039390087,0.86086184,0.62978244,1.0172923,0.024734214,1.0172923,"up","ZNF542",147947.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:56879507-56888735 (+) // 92.38 // q13.43"]
["11733871_a_at",-0.018050194,0.018050194,0.122820854,-0.051231384,0.120780945,-0.034932137,0.88845134,0.6928373,1.0205884,0.029401146,1.0205884,"up","LOC100652805 /// LOC100653302 /// PGK1","100652805 /// 100653302 /// 5230","0005975 // carbohydrate metabolic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006094 // gluconeogenesis // traceable author statement /// 0006096 // glycolysis // inferred from electronic annotation /// 0006096 // glycolysis // traceable author statement /// 0016310 // phosphorylation // inferred from sequence or structural similarity /// 0016310 // phosphorylation // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0004618 // phosphoglycerate kinase activity // not recorded /// 0004618 // phosphoglycerate kinase activity // inferred from sequence or structural similarity /// 0004618 // phosphoglycerate kinase activity // inferred from electronic annotation /// 0004618 // phosphoglycerate kinase activity // traceable author statement /// 0005524 // ATP binding // inferred from sequence or structural similarity /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chrX:77359665-77382323 (+) // 82.0 // q21.1"]
["11753344_a_at",0.068451166,0.07545185,-0.11765742,-0.20570612,-0.068451166,0.17611504,0.91902924,0.7629846,1.0291328,0.04142922,1.0291328,"up","LINC00340",401237.0,"","","","chr6:21666645-21979247 (+) // 99.69 // p22.3"]
["11760948_at",-0.012085199,0.013075829,-0.078881025,-0.050651073,0.012085438,0.15293455,0.73124784,0.38752392,-1.0454228,-0.06408652,1.0454228,"down","ANAPC2",29882.0,"0000075 // cell cycle checkpoint // traceable author statement /// 0000079 // regulation of cyclin-dependent protein kinase activity // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0007094 // mitotic cell cycle spindle assembly checkpoint // traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0008054 // cyclin catabolic process // traceable author statement /// 0016567 // protein ubiquitination // traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0031915 // positive regulation of synaptic plasticity // inferred from sequence or structural similarity /// 0031915 // positive regulation of synaptic plasticity // inferred from electronic annotation /// 0045773 // positive regulation of axon extension // inferred from electronic annotation /// 0050775 // positive regulation of dendrite morphogenesis // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0070979 // protein K11-linked ubiquitination // inferred from direct assay /// 0090129 // positive regulation of synapse maturation // inferred from sequence or structural similarity /// 0090129 // positive regulation of synapse maturation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005680 // anaphase-promoting complex // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0031461 // cullin-RING ubiquitin ligase complex // inferred from electronic annotation","0004842 // ubiquitin-protein ligase activity // traceable author statement /// 0031625 // ubiquitin protein ligase binding // inferred from electronic annotation","chr9:140080909-140083004 (-) // 94.58 // q34.3"]
["11754580_s_at",-0.29112387,0.0055384636,-0.08917093,0.010668278,0.021821499,-0.0055384636,0.5885992,0.20211016,-1.0972579,-0.1339026,1.0972579,"down","CCDC92",80212.0,"","","","chr12:124420955-124424205 (-) // 93.15 // q24.31"]
["11743717_at",0.020182371,-0.004608631,-0.18220472,-0.031311035,0.06509757,0.004608631,0.72726977,0.38213503,-1.048511,-0.06834204,1.048511,"down","SMTNL1",219537.0,"0014823 // response to activity // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0045907 // positive regulation of vasoconstriction // inferred from sequence or structural similarity /// 0045907 // positive regulation of vasoconstriction // inferred from electronic annotation /// 0045908 // negative regulation of vasodilation // inferred from sequence or structural similarity /// 0045908 // negative regulation of vasodilation // inferred from electronic annotation /// 0048644 // muscle organ morphogenesis // inferred from electronic annotation","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0030016 // myofibril // inferred from electronic annotation /// 0031430 // M band // inferred from electronic annotation /// 0031674 // I band // inferred from electronic annotation /// 0043292 // contractile fiber // inferred from direct assay /// 0043292 // contractile fiber // inferred from electronic annotation","0005516 // calmodulin binding // inferred from electronic annotation /// 0008157 // protein phosphatase 1 binding // inferred from electronic annotation","chr11:57308978-57318408 (+) // 91.92 // q12.1"]
["11747282_x_at",-0.023498535,0.0058164597,0.008856773,-0.009426117,0.042551994,-0.0058164597,0.83484083,0.57354796,-1.0083839,-0.012044947,1.0083839,"down","ANXA2 /// ANXA2P2","302 /// 304","0001501 // skeletal system development // traceable author statement /// 0001525 // angiogenesis // inferred from electronic annotation /// 0001525 // angiogenesis // inferred from expression pattern /// 0007589 // body fluid secretion // inferred from electronic annotation /// 0030199 // collagen fibril organization // inferred from electronic annotation /// 0031340 // positive regulation of vesicle fusion // inferred from direct assay /// 0042730 // fibrinolysis // inferred from electronic annotation /// 0051099 // positive regulation of binding // inferred from electronic annotation /// 0071229 // cellular response to acid // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005604 // basement membrane // inferred from electronic annotation /// 0005625 // soluble fraction // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0005811 // lipid particle // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0019897 // extrinsic to plasma membrane // inferred from electronic annotation /// 0030496 // midbody // inferred from direct assay /// 0031012 // extracellular matrix // inferred from sequence or structural similarity /// 0035749 // myelin sheath adaxonal region // inferred from electronic annotation /// 0042383 // sarcolemma // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0043220 // Schmidt-Lanterman incisure // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0004859 // phospholipase inhibitor activity // inferred from electronic annotation /// 0004859 // phospholipase inhibitor activity // traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005544 // calcium-dependent phospholipid binding // inferred from electronic annotation /// 0005544 // calcium-dependent phospholipid binding // inferred from direct assay /// 0005546 // phosphatidylinositol-4,5-bisphosphate binding // inferred from electronic annotation /// 0008092 // cytoskeletal protein binding // inferred from electronic annotation /// 0017137 // Rab GTPase binding // inferred from electronic annotation","chr15:60639762-60690185 (-) // 76.7 // q22.2"]
["11747930_x_at",0.0042333603,0.0126981735,-0.033951283,7.634163E-4,-0.10649967,-7.634163E-4,0.7880094,0.4795379,1.0208894,0.02982658,1.0208894,"up","UBAP1",51271.0,"","0005737 // cytoplasm // inferred from direct assay","","chr9:34179039-34252052 (+) // 99.1 // p13.3"]
["11743092_at",-0.124387264,-0.06533623,0.14283562,-7.286072E-4,0.15040112,7.286072E-4,0.8130416,0.5281012,-1.0466384,-0.06576306,1.0466384,"down","THEM4",117145.0,"0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","","chr1:151846064-151882284 (-) // 68.5 // q21.3"]
["11724376_at",-0.035077095,0.0026164055,-0.24853945,0.06843901,0.0110993385,-0.0026164055,0.6031076,0.2155412,-1.0862132,-0.11930734,1.0862132,"down","PAG1",55824.0,"0007165 // signal transduction // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0035556 // intracellular signal transduction // inferred from direct assay /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0050863 // regulation of T cell activation // inferred from direct assay /// 0050868 // negative regulation of T cell activation // inferred from electronic annotation","0005622 // intracellular // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0045121 // membrane raft // inferred from direct assay","0005070 // SH3/SH2 adaptor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0042169 // SH2 domain binding // inferred from direct assay","chr8:81880044-82024303 (-) // 93.69 // q21.13"]
["11746987_a_at",0.03202486,-0.07628679,0.0014820099,-0.08426833,-0.0014820099,0.06593561,0.96554095,0.89430624,-1.0053202,-0.0076550683,1.0053202,"down","ADAM2",2515.0,"0006508 // proteolysis // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007229 // integrin-mediated signaling pathway // inferred from electronic annotation /// 0007342 // fusion of sperm to egg plasma membrane // traceable author statement /// 0008542 // visual learning // inferred from electronic annotation /// 0030534 // adult behavior // inferred from electronic annotation","0001669 // acrosomal vesicle // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0005178 // integrin binding // traceable author statement /// 0008237 // metallopeptidase activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation","chr8:39601256-39695728 (-) // 99.18 // p11.22"]
["11738814_a_at",0.019172668,0.11705637,0.33205414,-0.050045967,-0.019172668,-0.09100342,0.44383284,0.09144025,1.1562887,0.2095017,1.1562887,"up","NFATC2",4773.0,"0001816 // cytokine production // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from mutant phenotype /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0030890 // positive regulation of B cell proliferation // inferred from mutant phenotype /// 0042493 // response to drug // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0050853 // B cell receptor signaling pathway // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0015629 // actin cytoskeleton // inferred from direct assay","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from electronic annotation","chr20:50007764-50179168 (-) // 100.0 // q13.2"]
["11761983_at",-0.12791061,0.034178257,0.10740328,-0.21192312,0.020576715,-0.020576715,0.7940075,0.4931815,1.0535057,0.07519806,1.0535057,"up","IQCF1",132141.0,"","","","chr3:51842522-51937384 (-) // 32.45 // p21.2"]
["11741349_at",0.057742596,-0.092440605,-0.17109656,0.072451115,-0.057742596,0.16324043,0.6234553,0.24031265,-1.092713,-0.12791452,1.092713,"down","SLFN12L",1.00506736E8,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005524 // ATP binding // inferred from electronic annotation","chr17:33801921-33864880 (-) // 93.36 // q12"]
["11739320_x_at",0.015540123,-0.071876526,-0.01838684,-0.015540123,0.105410576,0.043445587,0.5695585,0.18376102,-1.0492413,-0.0693465,1.0492413,"down","ATG12",9140.0,"0000045 // autophagic vacuole assembly // inferred from sequence or structural similarity /// 0000045 // autophagic vacuole assembly // inferred from electronic annotation /// 0006914 // autophagy // inferred from electronic annotation /// 0032480 // negative regulation of type I interferon production // traceable author statement /// 0045087 // innate immune response // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0034045 // pre-autophagosomal structure membrane // inferred from sequence or structural similarity","0005515 // protein binding // inferred from physical interaction","chr5:115165814-115177555 (-) // 79.22 // q22.3"]
["11736079_a_at",0.059697628,0.029159069,0.037484646,-0.029159546,-0.05674076,-0.04545355,0.11455932,0.0020997482,1.0613484,0.08589837,1.0613484,"up","NEK9",91754.0,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr14:75548728-75593778 (-) // 99.18 // q24.3"]
["11749559_x_at",-0.027490139,0.099935055,0.027490139,0.0920558,-0.17911339,-0.33055234,0.6326368,0.25211975,1.1270214,0.17251495,1.1270214,"up","CYP4F8",11283.0,"0006690 // icosanoid metabolic process // traceable author statement /// 0006693 // prostaglandin metabolic process // traceable author statement /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004497 // monooxygenase activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from electronic annotation /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016705 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen // inferred from electronic annotation /// 0018685 // alkane 1-monooxygenase activity // traceable author statement /// 0020037 // heme binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070330 // aromatase activity // inferred from electronic annotation","chr19:15726028-15740167 (+) // 99.21 // p13.12"]
["11727496_x_at",-0.048988342,-0.05911827,-0.0067796707,0.006778717,0.040714264,0.026688576,0.29352236,0.028552989,-1.0446521,-0.06302257,1.0446521,"down","C17orf76-AS1 /// SNORD49A /// SNORD49B /// SNORD65","125144 /// 26800 /// 692087 /// 692106","","0005739 // mitochondrion // inferred from electronic annotation","","chr17:16342170-16345332 (+) // 78.66 // p11.2"]
["11745727_a_at",0.055330753,-0.028419495,0.12163687,0.028419971,-0.048205853,-0.089529514,0.58238375,0.19628525,1.0613897,0.085954435,1.0613897,"up","TCF12",6938.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006955 // immune response // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007517 // muscle organ development // traceable author statement /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0070888 // E-box binding // inferred from electronic annotation","chr15:57210486-57580712 (+) // 99.14 // q21.3"]
["11718720_a_at",-0.008888245,-0.053757668,-0.15214348,0.03252983,0.008888245,0.023403168,0.45028526,0.0953261,-1.0667362,-0.09320348,1.0667362,"down","BRD8",10902.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0016568 // chromatin modification // inferred from electronic annotation /// 0040008 // regulation of growth // inferred from electronic annotation /// 0043967 // histone H4 acetylation // inferred from direct assay /// 0043968 // histone H2A acetylation // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0035267 // NuA4 histone acetyltransferase complex // inferred from direct assay","0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0004887 // thyroid hormone receptor activity // traceable author statement","chr5:137492572-137514358 (-) // 99.23 // q31.2"]
["11762316_at",0.032981873,0.09797716,-0.2252407,-0.061154842,-0.032981634,0.13067985,0.9023329,0.72473437,-1.0306885,-0.043608412,1.0306885,"down","GLYATL1",92292.0,"","0005739 // mitochondrion // inferred from electronic annotation","0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0047961 // glycine N-acyltransferase activity // inferred from electronic annotation","chr11:58714516-58723133 (+) // 64.21 // q12.1"]
["11733733_a_at",0.062503815,-0.0433712,0.108253956,-0.039659023,0.039659023,-0.058561325,0.68274623,0.31542563,1.0438994,0.06198271,1.0438994,"up","DPH5",51611.0,"0008152 // metabolic process // inferred from electronic annotation /// 0017183 // peptidyl-diphthamide biosynthetic process from peptidyl-histidine // inferred from electronic annotation /// 0017183 // peptidyl-diphthamide biosynthetic process from peptidyl-histidine // non-traceable author statement /// 0032259 // methylation // inferred from electronic annotation","","0004164 // diphthine synthase activity // inferred from electronic annotation /// 0004164 // diphthine synthase activity // non-traceable author statement /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr1:101455182-101491363 (-) // 79.53 // p21.2"]
["11757240_x_at",-0.17995787,-0.006974697,0.006974697,0.029233456,-0.07272816,0.006974697,0.80791533,0.5185378,-1.0336964,-0.04781254,1.0336964,"down","LOC100130557",1.00130557E8,"","","","chr1:41154801-41157933 (-) // 62.19 // p34.2"]
["11737662_a_at",0.01777625,-0.07584858,-0.017776012,0.14083314,0.02293539,-0.12593937,0.8782479,0.6675205,-1.026613,-0.03789243,1.026613,"down","TET2",54790.0,"0001822 // kidney development // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0030099 // myeloid cell differentiation // inferred from mutant phenotype /// 0055114 // oxidation-reduction process // inferred from electronic annotation","","0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016702 // oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen // inferred from electronic annotation /// 0016706 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070579 // methylcytosine dioxygenase activity // inferred from mutant phenotype /// 0070579 // methylcytosine dioxygenase activity // inferred from sequence or structural similarity","chr4:106067942-106163928 (+) // 74.01 // q24"]
["11757322_a_at",0.06249714,0.033346176,0.073539734,-0.1431756,-0.033346176,-0.10435963,0.2116233,0.011936077,1.1096373,0.15008813,1.1096373,"up","HAUS7",55559.0,"0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0051225 // spindle assembly // inferred from mutant phenotype /// 0051297 // centrosome organization // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation","0000502 // proteasome complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0070652 // HAUS complex // inferred from direct assay","0031996 // thioesterase binding // inferred from physical interaction /// 0031996 // thioesterase binding // inferred from sequence or structural similarity","chrX:152713127-152722011 (-) // 95.68 // q28"]
["11743604_s_at",0.006207466,-0.006207466,0.17922878,-0.052363396,0.015447617,-0.096105576,0.5871909,0.20104472,1.0748113,0.10408345,1.0748113,"up","RRM1",6240.0,"0006260 // DNA replication // inferred from electronic annotation /// 0006260 // DNA replication // non-traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0009263 // deoxyribonucleotide biosynthetic process // inferred from sequence or structural similarity /// 0009263 // deoxyribonucleotide biosynthetic process // inferred from electronic annotation /// 0015949 // nucleobase-containing small molecule interconversion // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051259 // protein oligomerization // inferred from electronic annotation /// 0051290 // protein heterotetramerization // inferred from electronic annotation /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005971 // ribonucleoside-diphosphate reductase complex // non-traceable author statement /// 0005971 // ribonucleoside-diphosphate reductase complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004748 // ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor // inferred from sequence or structural similarity /// 0004748 // ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor // non-traceable author statement /// 0004748 // ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0017076 // purine nucleotide binding // inferred from electronic annotation","chr11:4115594-4160106 (+) // 94.08 // p15.4"]
["11761961_s_at",0.14317703,-0.023282528,0.12904263,-0.04740143,-0.18343234,0.02328229,0.50739026,0.13257669,1.1112342,0.1521629,1.1112342,"up","MT1DP",326343.0,"","","0046872 // metal ion binding // inferred from electronic annotation","chr16:56677598-56679158 (+) // 87.36 // q12.2"]
["11738054_a_at",-0.031628847,-0.008933306,0.07085419,0.030372858,0.008933306,-0.0742712,0.87047976,0.650883,1.0151918,0.02175231,1.0151918,"up","ITGB1BP2",26548.0,"0007165 // signal transduction // traceable author statement /// 0007517 // muscle organ development // traceable author statement","0030018 // Z disc // inferred from electronic annotation","0005178 // integrin binding // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chrX:70521583-70525220 (+) // 98.4 // q13.1"]
["11726142_a_at",0.0070853233,0.010512829,0.109544754,-0.0070858,-0.17378712,-0.017236233,0.5467725,0.16325136,1.078045,0.108417414,1.078045,"up","FMN2",56776.0,"0007132 // meiotic metaphase I // inferred from sequence or structural similarity /// 0007132 // meiotic metaphase I // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0016043 // cellular component organization // inferred from electronic annotation /// 0016344 // meiotic chromosome movement towards spindle pole // inferred from sequence or structural similarity /// 0016344 // meiotic chromosome movement towards spindle pole // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0040038 // polar body extrusion after meiotic divisions // inferred from sequence or structural similarity /// 0040038 // polar body extrusion after meiotic divisions // inferred from electronic annotation /// 0048477 // oogenesis // inferred from sequence or structural similarity /// 0048477 // oogenesis // inferred from electronic annotation /// 0051295 // establishment of meiotic spindle localization // inferred from sequence or structural similarity /// 0051295 // establishment of meiotic spindle localization // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation","chr1:240255184-240638489 (+) // 98.08 // q43"]
["11729374_at",0.0011920929,0.18639898,-0.08655119,0.17206764,-0.043088913,-0.0011920929,0.9805687,0.93578357,-1.006199,-0.008915664,1.006199,"down","KRT34 /// LOC100653049","100653049 /// 3885","0008544 // epidermis development // traceable author statement","0005882 // intermediate filament // inferred from electronic annotation","0005198 // structural molecule activity // inferred from electronic annotation /// 0005198 // structural molecule activity // non-traceable author statement","chr17:39533916-39538655 (-) // 97.42 // q21.2"]
["11735500_a_at",0.019194841,-0.027235508,0.17020679,0.021550179,-0.095086336,-0.019194841,0.65826863,0.2838571,1.0606625,0.084965676,1.0606625,"up","BTN1A1",696.0,"","0005576 // extracellular region // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // traceable author statement","chr6:26501455-26510650 (+) // 98.36 // p22.2"]
["11726743_at",-0.061289787,-0.0040402412,0.0040402412,0.09274268,0.06572819,-0.08504677,0.7924301,0.4890783,-1.031615,-0.044904683,1.031615,"down","F2RL2",2151.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0007596 // blood coagulation // inferred from electronic annotation /// 0007599 // hemostasis // inferred from electronic annotation /// 0009611 // response to wounding // traceable author statement /// 0009611 // response to wounding // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0070493 // thrombin receptor signaling pathway // traceable author statement /// 0070493 // thrombin receptor signaling pathway // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation","0004435 // phosphatidylinositol phospholipase C activity // traceable author statement /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0015057 // thrombin receptor activity // inferred from electronic annotation /// 0015057 // thrombin receptor activity // traceable author statement","chr5:75911307-75919259 (-) // 76.68 // q13.3"]
["11744619_a_at",-0.017133236,-0.05468321,-0.041168213,0.038968563,0.017133236,0.037054062,0.16645323,0.006166893,-1.048781,-0.06871351,1.048781,"down","SNX24",28966.0,"0006810 // transport // inferred from electronic annotation /// 0007154 // cell communication // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0008289 // lipid binding // inferred from electronic annotation /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation","chr5:122181307-122337840 (+) // 90.72 // q23.2"]
["11729293_a_at",-0.16777945,-0.016028404,0.033495426,0.016028881,0.10614967,-0.03626871,0.703168,0.3441312,-1.0560958,-0.07874076,1.0560958,"down","SPPL2B",56928.0,"0006508 // proteolysis // inferred from electronic annotation /// 0006509 // membrane protein ectodomain proteolysis // inferred from direct assay /// 0031293 // membrane protein intracellular domain proteolysis // inferred from direct assay /// 0031293 // membrane protein intracellular domain proteolysis // inferred from mutant phenotype /// 0050776 // regulation of immune response // inferred from mutant phenotype","0000139 // Golgi membrane // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0010008 // endosome membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030660 // Golgi-associated vesicle membrane // inferred from direct assay /// 0071458 // integral to cytosolic side of endoplasmic reticulum membrane // inferred from direct assay /// 0071556 // integral to lumenal side of endoplasmic reticulum membrane // inferred from direct assay","0004190 // aspartic-type endopeptidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042500 // aspartic endopeptidase activity, intramembrane cleaving // inferred from mutant phenotype /// 0042803 // protein homodimerization activity // inferred from direct assay","chr19:2328628-2355099 (+) // 95.76 // p13.3"]
["11754784_x_at",0.037364483,0.072147846,-0.16795778,0.01664114,-0.01664114,-0.20294952,0.8748151,0.65952504,1.0339512,0.048168045,1.0339512,"up","KIAA0895L",653319.0,"0006887 // exocytosis // inferred from electronic annotation /// 0006887 // exocytosis // inferred from sequence or structural similarity /// 0030072 // peptide hormone secretion // inferred from electronic annotation /// 0030072 // peptide hormone secretion // inferred from sequence or structural similarity","0000145 // exocyst // inferred from electronic annotation /// 0000145 // exocyst // inferred from sequence or structural similarity /// 0030133 // transport vesicle // inferred from electronic annotation /// 0030141 // secretory granule // inferred from electronic annotation /// 0030141 // secretory granule // inferred from sequence or structural similarity /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","","chr16:67209506-67213455 (-) // 91.82 // q22.1"]
["11759210_x_at",-0.024117708,0.11571884,-0.04128599,-0.04821539,0.024117947,0.060318947,0.9823221,0.94043756,1.0032617,0.00469796,1.0032617,"up","AKD1",221264.0,"0006139 // nucleobase-containing compound metabolic process // inferred from electronic annotation","","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0019205 // nucleobase-containing compound kinase activity // inferred from electronic annotation","chr6:109870886-110012415 (-) // 89.82 // q21"]
["11763596_a_at",-0.06963277,-0.11489773,-0.14040995,0.2282641,0.06963277,0.08260751,0.21830897,0.012817006,-1.1770277,-0.23514827,1.1770277,"down","JAKMIP3",282973.0,"","0005794 // Golgi apparatus // inferred from electronic annotation","0008017 // microtubule binding // inferred from electronic annotation /// 0019900 // kinase binding // inferred from electronic annotation","chr10:133975286-133996696 (+) // 99.96 // q26.3"]
["11744682_x_at",0.059007645,0.028043747,0.013720512,-0.05881691,-0.013719559,-0.03559494,0.25898695,0.020260137,1.0494508,0.06963447,1.0494508,"up","EIF5A",1984.0,"0006406 // mRNA export from nucleus // inferred from mutant phenotype /// 0006412 // translation // inferred from electronic annotation /// 0006414 // translational elongation // inferred from sequence or structural similarity /// 0006414 // translational elongation // inferred from electronic annotation /// 0006452 // translational frameshifting // inferred from electronic annotation /// 0006611 // protein export from nucleus // inferred from mutant phenotype /// 0006810 // transport // inferred from electronic annotation /// 0006913 // nucleocytoplasmic transport // inferred from direct assay /// 0006913 // nucleocytoplasmic transport // inferred from mutant phenotype /// 0006917 // induction of apoptosis // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from genetic interaction /// 0008612 // peptidyl-lysine modification to hypusine // traceable author statement /// 0008612 // peptidyl-lysine modification to hypusine // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045901 // positive regulation of translational elongation // inferred from sequence or structural similarity /// 0045901 // positive regulation of translational elongation // inferred from electronic annotation /// 0045905 // positive regulation of translational termination // inferred from electronic annotation /// 0051028 // mRNA transport // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005642 // annulate lamellae // inferred from direct assay /// 0005643 // nuclear pore // inferred from direct assay /// 0005643 // nuclear pore // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0003723 // RNA binding // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0003746 // translation elongation factor activity // inferred from sequence or structural similarity /// 0003746 // translation elongation factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0017070 // U6 snRNA binding // inferred from direct assay /// 0043022 // ribosome binding // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from physical interaction","chr17:7210928-7215772 (+) // 85.4 // p13.1"]
["11754620_s_at",0.03236866,0.13058329,0.15957451,-0.073673725,-0.03236866,-0.09023571,0.23043531,0.014832325,1.1273495,0.17293485,1.1273495,"up","PKP4",8502.0,"0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // non-traceable author statement /// 0032321 // positive regulation of Rho GTPase activity // inferred from direct assay /// 0071777 // positive regulation of cell cycle cytokinesis // inferred from mutant phenotype","0000922 // spindle pole // inferred from direct assay /// 0000922 // spindle pole // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005911 // cell-cell junction // traceable author statement /// 0009898 // internal side of plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030057 // desmosome // inferred from electronic annotation /// 0030496 // midbody // inferred from direct assay /// 0030496 // midbody // inferred from electronic annotation /// 0051233 // spindle midzone // inferred from direct assay /// 0072686 // mitotic spindle // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr2:159499031-159537938 (+) // 99.78 // q24.1"]
["11715453_a_at",-0.07141113,-0.09086895,-0.11777973,0.11413002,0.07141113,0.13674831,0.09071924,0.0010138075,-1.149322,-0.20078309,1.149322,"down","COL4A2",1284.0,"0001525 // angiogenesis // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0016525 // negative regulation of angiogenesis // inferred from direct assay /// 0030198 // extracellular matrix organization // non-traceable author statement /// 0071560 // cellular response to transforming growth factor beta stimulus // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005581 // collagen // inferred from electronic annotation /// 0005587 // collagen type IV // traceable author statement /// 0005587 // collagen type IV // inferred from electronic annotation /// 0005604 // basement membrane // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from sequence or structural similarity /// 0031012 // extracellular matrix // traceable author statement","0005201 // extracellular matrix structural constituent // traceable author statement /// 0005201 // extracellular matrix structural constituent // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr13:110959613-111165374 (+) // 97.94 // q34"]
["11726315_a_at",-0.013035297,0.027472973,0.073857784,-0.11204481,-0.086257935,0.013035297,0.48594528,0.11644838,1.0652467,0.09118758,1.0652467,"up","METTL22",79091.0,"0032259 // methylation // inferred from electronic annotation","","0008168 // methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr16:8715496-8740079 (+) // 98.33 // p13.2"]
["11754441_a_at",-0.008085251,0.09125614,0.10341978,-0.0029892921,0.002989769,-0.042945385,0.4847313,0.11535613,1.0544655,0.076511934,1.0544655,"up","AGAP3",116988.0,"0000060 // protein import into nucleus, translocation // inferred from electronic annotation /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0032312 // regulation of ARF GTPase activity // inferred from electronic annotation /// 0034614 // cellular response to reactive oxygen species // inferred from electronic annotation /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030131 // clathrin adaptor complex // inferred from electronic annotation /// 0071944 // cell periphery // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0008060 // ARF GTPase activator activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0031593 // polyubiquitin binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:150831511-150841521 (+) // 98.73 // q36.1"]
["11763723_a_at",-0.016368866,0.03569603,-9.5939636E-4,0.09448719,-0.08588028,9.5939636E-4,0.9876092,0.9595175,1.0020356,0.0029337907,1.0020356,"up","SRRT",51593.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from sequence or structural similarity /// 0008283 // cell proliferation // inferred from electronic annotation /// 0031047 // gene silencing by RNA // inferred from electronic annotation /// 0031053 // primary miRNA processing // inferred from mutant phenotype /// 0031053 // primary miRNA processing // inferred from electronic annotation /// 0046685 // response to arsenic-containing substance // non-traceable author statement /// 0097150 // neuronal stem cell maintenance // inferred from sequence or structural similarity","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from sequence or structural similarity /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction","chr7:100472725-100486285 (+) // 99.77 // q22.1"]
["11752377_a_at",-0.039008617,-0.064524174,0.050868988,0.1052804,-0.3017602,0.039008617,0.9342806,0.80269164,1.0245112,0.03493578,1.0245112,"up","CASC3",22794.0,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0008298 // intracellular mRNA localization // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0051028 // mRNA transport // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016607 // nuclear speck // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0035145 // exon-exon junction complex // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from direct assay","chr17:38296569-38328417 (+) // 90.72 // q21.1"]
["11754748_x_at",-0.10959077,-0.12762403,-0.038882256,0.1640172,0.038882256,0.24622583,0.2653518,0.02161708,-1.1824186,-0.24174085,1.1824186,"down","GFAP",2670.0,"0009611 // response to wounding // inferred from electronic annotation /// 0010625 // positive regulation of Schwann cell proliferation // inferred from electronic annotation /// 0010977 // negative regulation of neuron projection development // inferred from electronic annotation /// 0014002 // astrocyte development // inferred from electronic annotation /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0031102 // neuron projection regeneration // inferred from electronic annotation /// 0045103 // intermediate filament-based process // inferred from electronic annotation /// 0045109 // intermediate filament organization // inferred from electronic annotation /// 0051580 // regulation of neurotransmitter uptake // inferred from electronic annotation /// 0060020 // Bergmann glial cell differentiation // inferred from electronic annotation /// 0060291 // long-term synaptic potentiation // inferred from electronic annotation","0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005882 // intermediate filament // inferred from electronic annotation /// 0005882 // intermediate filament // traceable author statement /// 0042995 // cell projection // inferred from electronic annotation /// 0044297 // cell body // inferred from electronic annotation /// 0044464 // cell part // inferred from electronic annotation","0005178 // integrin binding // inferred from electronic annotation /// 0005198 // structural molecule activity // inferred from electronic annotation /// 0005200 // structural constituent of cytoskeleton // inferred from electronic annotation /// 0005200 // structural constituent of cytoskeleton // traceable author statement","chr17:42982992-42992868 (-) // 90.53 // q21.31"]
["11760250_at",-0.18865538,-0.036981106,-0.2994182,0.35757136,0.036981106,0.2907753,0.30310556,0.031097457,-1.322677,-0.4034608,1.322677,"down","SDHA",6389.0,"0006099 // tricarboxylic acid cycle // inferred from electronic annotation /// 0006099 // tricarboxylic acid cycle // traceable author statement /// 0006105 // succinate metabolic process // inferred from direct assay /// 0006105 // succinate metabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0007399 // nervous system development // inferred from mutant phenotype /// 0022900 // electron transport chain // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // inferred from direct assay /// 0022904 // respiratory electron transport chain // traceable author statement /// 0022904 // respiratory electron transport chain // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from sequence or structural similarity /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005749 // mitochondrial respiratory chain complex II // inferred from sequence or structural similarity /// 0005749 // mitochondrial respiratory chain complex II // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0000104 // succinate dehydrogenase activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0008177 // succinate dehydrogenase (ubiquinone) activity // inferred from electronic annotation /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016627 // oxidoreductase activity, acting on the CH-CH group of donors // inferred from electronic annotation /// 0050660 // flavin adenine dinucleotide binding // inferred from electronic annotation","chr5:218419-251979 (+) // 98.76 // p15.33"]
["11730764_a_at",-0.025717735,0.022404194,-0.03486395,0.18062735,0.07506943,-0.022404194,0.6010606,0.213678,-1.0647317,-0.090489954,1.0647317,"down","CD177",57126.0,"0007596 // blood coagulation // traceable author statement /// 0050900 // leukocyte migration // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031225 // anchored to membrane // inferred from electronic annotation","","chr19:43857810-43867725 (+) // 79.41 // q13.31"]
["11740356_a_at",-0.11538744,-0.0043461323,0.0043463707,0.123705626,-0.01727891,0.12087369,0.5060434,0.13166656,-1.0823966,-0.11422925,1.0823966,"down","GPR137C",283554.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr14:53019865-53104430 (+) // 98.0 // q22.1"]
["AFFX-PheX-5_at",0.21759033,0.050521374,-0.14929104,-0.04201269,-0.0811038,0.04201269,0.83941305,0.5841753,1.0472759,0.06664156,1.0472759,"up",-0.14929104,"","","0000160 // two-component signal transduction system (phosphorelay) // inferred from electronic annotation /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008652 // cellular amino acid biosynthetic process // inferred from electronic annotation /// 0009073 // aromatic amino acid family biosynthetic process // inferred from electronic annotation /// 0009094 // L-phenylalanine biosynthetic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0023014 // signal transduction by phosphorylation // inferred from electronic annotation /// 0030435 // sporulation resulting in formation of a cellular spore // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0000155 // two-component sensor activity // inferred from electronic annotation /// 0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0004664 // prephenate dehydratase activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016597 // amino acid binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation"]
["11756875_x_at",-0.030734062,-0.03639412,-0.041394234,0.030734062,0.03144169,0.07588673,0.16319364,0.005728875,-1.0586275,-0.082195014,1.0586275,"down","COMMD6",170622.0,"0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0051059 // NF-kappaB binding // inferred from physical interaction","chr13:76100572-76112057 (-) // 80.69 // q22.2"]
["11748160_s_at",0.035575867,0.0041251183,-0.12898016,-0.03469038,0.014854431,-0.0041251183,0.89086986,0.69940364,-1.0152061,-0.02177264,1.0152061,"down","LAMP2",3920.0,"0002576 // platelet degranulation // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0030168 // platelet activation // traceable author statement","0005764 // lysosome // inferred from direct assay /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from direct assay /// 0005770 // late endosome // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030670 // phagocytic vesicle membrane // inferred from electronic annotation /// 0031088 // platelet dense granule membrane // inferred from direct assay /// 0031088 // platelet dense granule membrane // traceable author statement /// 0031902 // late endosome membrane // inferred from direct assay","","chrX:119572463-119603151 (-) // 94.96 // q24"]
["11751267_a_at",0.107867956,-0.03308654,0.04521346,-0.003029585,-0.06794429,0.003029585,0.63149387,0.25064754,1.0443797,0.06264634,1.0443797,"up","ADAMDEC1",27299.0,"0006508 // proteolysis // inferred from electronic annotation /// 0006955 // immune response // non-traceable author statement /// 0007162 // negative regulation of cell adhesion // non-traceable author statement /// 0007229 // integrin-mediated signaling pathway // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","0004222 // metalloendopeptidase activity // non-traceable author statement /// 0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:24242017-24263004 (+) // 97.51 // p21.2"]
["11719468_a_at",0.0068449974,-0.06284714,-0.0068445206,0.11593008,-0.13379288,0.017550945,0.9319883,0.79665476,-1.0145535,-0.02084501,1.0145535,"down","PRPF31",26121.0,"0000244 // assembly of spliceosomal tri-snRNP // inferred from direct assay /// 0000244 // assembly of spliceosomal tri-snRNP // inferred from mutant phenotype /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred from direct assay /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005684 // U2-type spliceosomal complex // inferred by curator /// 0005687 // U4 snRNP // inferred from direct assay /// 0005690 // U4atac snRNP // traceable author statement /// 0015030 // Cajal body // inferred from direct assay /// 0015030 // Cajal body // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0046540 // U4/U6 x U5 tri-snRNP complex // inferred from direct assay /// 0071339 // MLL1 complex // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0043021 // ribonucleoprotein complex binding // inferred from direct assay /// 0070990 // snRNP binding // inferred from physical interaction","chr19:54618789-54635144 (+) // 92.09 // q13.42"]
["11750547_a_at",0.045877457,0.021106482,-0.08133793,-0.021106482,0.13768768,-0.14751768,0.9863795,0.9545959,1.0038387,0.005527411,1.0038387,"up","GALNT14",79623.0,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006486 // protein glycosylation // inferred from electronic annotation /// 0016266 // O-glycan processing // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0000139 // Golgi membrane // traceable author statement /// 0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004653 // polypeptide N-acetylgalactosaminyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr2:31133667-31360887 (-) // 99.62 // p23.1"]
["11730054_s_at",0.040211678,0.0071139336,-0.026779652,-0.0071139336,0.02163744,-0.25878334,0.73124784,0.3876625,1.0630935,0.08826855,1.0630935,"up","SNX16",64089.0,"0006622 // protein targeting to lysosome // inferred from mutant phenotype /// 0006810 // transport // inferred from electronic annotation /// 0007154 // cell communication // inferred from electronic annotation /// 0008333 // endosome to lysosome transport // inferred from mutant phenotype /// 0015031 // protein transport // inferred from electronic annotation /// 0045022 // early endosome to late endosome transport // inferred from mutant phenotype","0005737 // cytoplasm // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0005770 // late endosome // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0031313 // extrinsic to endosome membrane // inferred from direct assay /// 0031901 // early endosome membrane // inferred from electronic annotation /// 0031902 // late endosome membrane // inferred from electronic annotation","0008289 // lipid binding // inferred from electronic annotation /// 0035091 // phosphatidylinositol binding // inferred from direct assay /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction","chr8:82711819-82754534 (-) // 97.34 // q21.13"]
["11739723_x_at",-0.11650133,-0.04057026,0.02389121,0.16627884,0.03694296,-0.023891449,0.5925453,0.20675048,-1.074876,-0.104170166,1.074876,"down","ATP2B2",491.0,"0000902 // cell morphogenesis // inferred from electronic annotation /// 0003407 // neural retina development // inferred from electronic annotation /// 0006754 // ATP biosynthetic process // inferred from electronic annotation /// 0006810 // transport // non-traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from mutant phenotype /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0006874 // cellular calcium ion homeostasis // inferred from electronic annotation /// 0006996 // organelle organization // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0007595 // lactation // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0007605 // sensory perception of sound // inferred from mutant phenotype /// 0007605 // sensory perception of sound // inferred from electronic annotation /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008361 // regulation of cell size // inferred from electronic annotation /// 0021549 // cerebellum development // inferred from electronic annotation /// 0021692 // cerebellar Purkinje cell layer morphogenesis // inferred from electronic annotation /// 0021702 // cerebellar Purkinje cell differentiation // inferred from electronic annotation /// 0021707 // cerebellar granule cell differentiation // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from direct assay /// 0034220 // ion transmembrane transport // traceable author statement /// 0040011 // locomotion // inferred from electronic annotation /// 0042428 // serotonin metabolic process // inferred from electronic annotation /// 0042472 // inner ear morphogenesis // inferred from electronic annotation /// 0045299 // otolith mineralization // inferred from electronic annotation /// 0046068 // cGMP metabolic process // inferred from electronic annotation /// 0048167 // regulation of synaptic plasticity // inferred from electronic annotation /// 0048839 // inner ear development // inferred from electronic annotation /// 0050808 // synapse organization // inferred from electronic annotation /// 0050885 // neuromuscular process controlling balance // inferred from electronic annotation /// 0050910 // detection of mechanical stimulus involved in sensory perception of sound // inferred from electronic annotation /// 0051480 // cytosolic calcium ion homeostasis // inferred from mutant phenotype /// 0051480 // cytosolic calcium ion homeostasis // inferred from electronic annotation /// 0051928 // positive regulation of calcium ion transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0060088 // auditory receptor cell stereocilium organization // inferred from electronic annotation /// 0060113 // inner ear receptor cell differentiation // inferred from electronic annotation /// 0070588 // calcium ion transmembrane transport // inferred from electronic annotation /// 0090102 // cochlea development // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // non-traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0045121 // membrane raft // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0005388 // calcium-transporting ATPase activity // inferred from direct assay /// 0005388 // calcium-transporting ATPase activity // non-traceable author statement /// 0005388 // calcium-transporting ATPase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from direct assay /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0015662 // ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016820 // hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances // inferred from electronic annotation /// 0030165 // PDZ domain binding // inferred from direct assay /// 0030899 // calcium-dependent ATPase activity // inferred from electronic annotation /// 0035254 // glutamate receptor binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:10365706-10547341 (-) // 95.69 // p25.3"]
["11715784_s_at",0.021000385,0.11591911,-0.15960741,-0.021000385,-0.370934,0.02239275,0.7880094,0.47953546,1.083439,0.115617916,1.083439,"up","PRR4",11272.0,"0007601 // visual perception // traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement","","chr12:10998447-11002074 (-) // 89.06 // p13.2"]
["11746483_a_at",0.040147305,-0.24829626,-0.16445494,0.21541548,-0.040147305,0.08858156,0.5093426,0.13381393,-1.1584142,-0.21215124,1.1584142,"down","MYO6",4646.0,"0006605 // protein targeting // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from sequence or structural similarity /// 0006897 // endocytosis // inferred from mutant phenotype /// 0006897 // endocytosis // inferred from sequence or structural similarity /// 0006897 // endocytosis // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007268 // synaptic transmission // inferred from electronic annotation /// 0007416 // synapse assembly // inferred from electronic annotation /// 0007605 // sensory perception of sound // inferred from electronic annotation /// 0007605 // sensory perception of sound // inferred from direct assay /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0014047 // glutamate secretion // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016358 // dendrite development // inferred from electronic annotation /// 0030048 // actin filament-based movement // inferred from sequence or structural similarity /// 0030048 // actin filament-based movement // non-traceable author statement /// 0030330 // DNA damage response, signal transduction by p53 class mediator // inferred from direct assay /// 0042472 // inner ear morphogenesis // inferred from electronic annotation /// 0042491 // auditory receptor cell differentiation // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0048167 // regulation of synaptic plasticity // inferred from electronic annotation /// 0048839 // inner ear development // inferred from electronic annotation /// 0051046 // regulation of secretion // inferred from mutant phenotype /// 0071257 // cellular response to electrical stimulus // inferred from electronic annotation","0001726 // ruffle // inferred from direct assay /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005902 // microvillus // inferred from electronic annotation /// 0005905 // coated pit // inferred from electronic annotation /// 0005938 // cell cortex // inferred from sequence or structural similarity /// 0012506 // vesicle membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from direct assay /// 0016459 // myosin complex // inferred from electronic annotation /// 0016461 // unconventional myosin complex // traceable author statement /// 0016461 // unconventional myosin complex // non-traceable author statement /// 0016591 // DNA-directed RNA polymerase II, holoenzyme // inferred from direct assay /// 0030139 // endocytic vesicle // inferred from sequence or structural similarity /// 0030139 // endocytic vesicle // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030665 // clathrin coated vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031941 // filamentous actin // inferred from direct assay /// 0031941 // filamentous actin // inferred from sequence or structural similarity /// 0031965 // nuclear membrane // inferred from direct assay /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from electronic annotation /// 0045334 // clathrin-coated endocytic vesicle // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003774 // motor activity // inferred from sequence or structural similarity /// 0003774 // motor activity // inferred from electronic annotation /// 0003779 // actin binding // traceable author statement /// 0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from sequence or structural similarity /// 0005516 // calmodulin binding // traceable author statement /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0043531 // ADP binding // inferred from sequence or structural similarity /// 0051015 // actin filament binding // inferred from direct assay /// 0051015 // actin filament binding // inferred from sequence or structural similarity /// 0060001 // minus-end directed microfilament motor activity // non-traceable author statement","chr6:76527242-76624934 (+) // 97.36 // q14.1"]
["11758582_s_at",-0.15056515,-0.091032505,0.008551598,0.010195732,-0.008551598,0.10441065,0.49663258,0.12360907,-1.0814999,-0.11303358,1.0814999,"down","SIX4",51804.0,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007519 // skeletal muscle tissue development // inferred from electronic annotation /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0042472 // inner ear morphogenesis // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048538 // thymus development // inferred from electronic annotation /// 0048699 // generation of neurons // inferred from electronic annotation /// 0048701 // embryonic cranial skeleton morphogenesis // inferred from electronic annotation /// 0048704 // embryonic skeletal system morphogenesis // inferred from electronic annotation /// 0048856 // anatomical structure development // inferred from electronic annotation /// 0051451 // myoblast migration // inferred from electronic annotation /// 0072075 // metanephric mesenchyme development // inferred from electronic annotation /// 0072095 // regulation of branch elongation involved in ureteric bud branching // inferred from electronic annotation /// 0072107 // positive regulation of ureteric bud formation // inferred from electronic annotation /// 0090190 // positive regulation of branching involved in ureteric bud morphogenesis // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr14:61176260-61176664 (-) // 99.75 // q23.1"]
["11725150_s_at",-0.050339222,0.02324009,0.00182724,-0.040205,0.0038957596,-0.00182724,0.95961714,0.8763749,1.0029768,0.0042881994,1.0029768,"up","HR",55806.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0051291 // protein heterooligomerization // inferred from electronic annotation","0000118 // histone deacetylase complex // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0016604 // nuclear body // inferred from electronic annotation","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003714 // transcription corepressor activity // inferred from electronic annotation /// 0042809 // vitamin D receptor binding // inferred from electronic annotation /// 0042826 // histone deacetylase binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046966 // thyroid hormone receptor binding // inferred from electronic annotation","chr8:21971927-21989381 (-) // 96.75 // p21.3"]
["11736825_a_at",0.03830862,-0.03830862,0.09524679,0.078493595,-0.23404694,-0.2495346,0.60370904,0.21613504,1.1225488,0.16677819,1.1225488,"up","EPN2",22905.0,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0006897 // endocytosis // inferred from electronic annotation /// 0007219 // Notch signaling pathway // inferred from electronic annotation /// 0030100 // regulation of endocytosis // inferred from electronic annotation /// 0048568 // embryonic organ development // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0030128 // clathrin coat of endocytic vesicle // inferred from electronic annotation /// 0030136 // clathrin-coated vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0008289 // lipid binding // inferred from electronic annotation","chr17:19140689-19240028 (+) // 99.44 // p11.2"]
["11724915_at",0.19436455,0.17168427,0.20034218,-0.18056202,-0.17168427,-0.17565536,0.02284968,2.3129548E-6,1.2876712,0.36476427,1.2876712,"up","TMTC3",160418.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr12:88536072-88593664 (+) // 91.71 // q21.32"]
["11755614_s_at",0.008118629,-0.008119106,0.083901405,-0.044635296,0.03989792,-0.0420022,0.6961846,0.3340263,1.0306445,0.04354684,1.0306445,"up","FERMT1",55612.0,"0007155 // cell adhesion // inferred from direct assay /// 0007155 // cell adhesion // inferred from electronic annotation /// 0043616 // keratinocyte proliferation // inferred from direct assay /// 0051546 // keratinocyte migration // inferred from direct assay /// 0090162 // establishment of epithelial cell polarity // inferred from direct assay","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from direct assay /// 0030054 // cell junction // inferred from electronic annotation /// 0031941 // filamentous actin // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005543 // phospholipid binding // inferred from electronic annotation","chr20:6055711-6074819 (-) // 99.33 // p12.3"]
["11731628_a_at",-0.013320923,0.013320923,-0.022920609,-0.042621613,0.022920609,0.06902695,0.8083261,0.5196885,-1.0168326,-0.024082175,1.0168326,"down","OSGIN2",734.0,"0007126 // meiosis // non-traceable author statement /// 0007126 // meiosis // inferred from electronic annotation /// 0007281 // germ cell development // non-traceable author statement","","","chr8:90914767-90940193 (+) // 94.51 // q21.3"]
["11731824_at",-0.0205822,0.0043861866,0.06017971,0.04628873,-0.0043861866,-0.103378296,0.80929255,0.52089703,1.0246656,0.035153154,1.0246656,"up","GPR83",10888.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004983 // neuropeptide Y receptor activity // inferred from electronic annotation","chr11:94110481-94134585 (-) // 83.9 // q21"]
["11727614_at",-0.068520546,0.04407215,0.04886484,-0.044072628,0.104111195,-0.086827755,0.9395253,0.81785965,1.0119013,0.01706852,1.0119013,"up","SCN2B",6327.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0035725 // sodium ion transmembrane transport // inferred from direct assay /// 0035725 // sodium ion transmembrane transport // inferred from electronic annotation /// 0046684 // response to pyrethroid // inferred from electronic annotation /// 0060048 // cardiac muscle contraction // inferred from mutant phenotype /// 0060371 // regulation of atrial cardiomyocyte membrane depolarization // inferred from mutant phenotype /// 0086002 // regulation of cardiac muscle cell action potential involved in contraction // inferred from mutant phenotype /// 0086091 // regulation of heart rate by cardiac conduction // inferred from mutant phenotype /// 0090072 // positive regulation of sodium ion transport via voltage-gated sodium channel activity // inferred from direct assay /// 2000649 // regulation of sodium ion transmembrane transporter activity // inferred from direct assay","0001518 // voltage-gated sodium channel complex // inferred from direct assay /// 0001518 // voltage-gated sodium channel complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005248 // voltage-gated sodium channel activity // inferred from electronic annotation /// 0005272 // sodium channel activity // inferred from electronic annotation /// 0017080 // sodium channel regulator activity // inferred from direct assay /// 0086006 // voltage-gated sodium channel activity involved in regulation of cardiac muscle cell action potential // inferred from mutant phenotype","chr11:118033520-118047388 (-) // 90.03 // q23.3"]
["11722745_a_at",-0.008868694,0.018566608,-0.012330532,0.008868694,-0.11991882,0.013219833,0.80760974,0.51742494,1.022239,0.031732496,1.022239,"up","MEF2B /// MEF2BNB /// MEF2BNB-MEF2B","100271849 /// 4207 /// 729991","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007507 // heart development // inferred from expression pattern /// 0007517 // muscle organ development // traceable author statement","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0042826 // histone deacetylase binding // inferred from physical interaction /// 0046983 // protein dimerization activity // inferred from electronic annotation","chr19:19292684-19303400 (-) // 73.62 // p13.11"]
["11753875_a_at",0.009748459,-0.0048828125,-0.06305981,0.060796738,0.0048828125,-0.013494492,0.6763952,0.3079279,-1.025831,-0.036793053,1.025831,"down","POLR2L",5441.0,"0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006283 // transcription-coupled nucleotide-excision repair // traceable author statement /// 0006289 // nucleotide-excision repair // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006356 // regulation of transcription from RNA polymerase I promoter // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // inferred from direct assay /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006368 // transcription elongation from RNA polymerase II promoter // traceable author statement /// 0006370 // 7-methylguanosine mRNA capping // traceable author statement /// 0006383 // transcription from RNA polymerase III promoter // traceable author statement /// 0006385 // transcription elongation from RNA polymerase III promoter // traceable author statement /// 0006386 // termination of RNA polymerase III transcription // traceable author statement /// 0006468 // protein phosphorylation // inferred from direct assay /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0050434 // positive regulation of viral transcription // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005665 // DNA-directed RNA polymerase II, core complex // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003899 // DNA-directed RNA polymerase activity // inferred from electronic annotation /// 0003899 // DNA-directed RNA polymerase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:840371-842508 (-) // 98.04 // p15.5"]
["11718585_x_at",-0.0095191,-0.035089016,-0.043064594,0.0772357,0.0095191,0.13484907,0.36560383,0.05183024,-1.0740731,-0.10309215,1.0740731,"down","SAP30BP",29115.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0045111 // intermediate filament cytoskeleton // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr17:73663195-73704139 (+) // 86.96 // q25.1"]
["11738838_a_at",-0.03647375,0.003745079,-0.104970455,0.003745079,-0.003745079,0.12613773,0.5547814,0.17062469,-1.0628556,-0.0879456,1.0628556,"down","IL5RA",3568.0,"0002437 // inflammatory response to antigenic stimulus // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0008283 // cell proliferation // non-traceable author statement /// 0019221 // cytokine-mediated signaling pathway // inferred from electronic annotation /// 0032674 // regulation of interleukin-5 production // inferred from electronic annotation /// 0038043 // interleukin-5-mediated signaling pathway // traceable author statement /// 0038043 // interleukin-5-mediated signaling pathway // non-traceable author statement /// 0071310 // cellular response to organic substance // inferred from electronic annotation","0005615 // extracellular space // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005895 // interleukin-5 receptor complex // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0004872 // receptor activity // inferred from electronic annotation /// 0004896 // cytokine receptor activity // inferred from electronic annotation /// 0004914 // interleukin-5 receptor activity // traceable author statement /// 0004914 // interleukin-5 receptor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr3:3133487-3152058 (-) // 82.76 // p26.2"]
["11740618_at",0.0068688393,-0.0068688393,0.057792425,-0.014530897,0.27451777,-0.007989883,0.820093,0.5421994,-1.0458927,-0.06473487,1.0458927,"down","ADRA1D",146.0,"0001986 // negative regulation of the force of heart contraction involved in baroreceptor response to increased systemic arterial blood pressure // inferred from electronic annotation /// 0001994 // norepinephrine-epinephrine vasoconstriction involved in regulation of systemic arterial blood pressure // inferred from electronic annotation /// 0006259 // DNA metabolic process // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007188 // adenylate cyclase-modulating G-protein coupled receptor signaling pathway // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0007275 // multicellular organismal development // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0071875 // adrenergic receptor signaling pathway // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004935 // adrenergic receptor activity // inferred from electronic annotation /// 0004937 // alpha1-adrenergic receptor activity // inferred from electronic annotation /// 0004937 // alpha1-adrenergic receptor activity // traceable author statement","chr20:4200906-4229662 (-) // 89.61 // p13"]
["11751847_x_at",0.056722164,-0.03723383,-0.020885944,0.020885944,-0.097639084,0.02853918,0.9227258,0.7709064,1.0108756,0.015605443,1.0108756,"up","ORAOV1",220064.0,"0006826 // iron ion transport // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // traceable author statement /// 0006880 // intracellular sequestering of iron ion // inferred from direct assay /// 0006892 // post-Golgi vesicle-mediated transport // traceable author statement /// 0006955 // immune response // inferred from sequence or structural similarity /// 0008285 // negative regulation of cell proliferation // inferred from sequence or structural similarity /// 0016044 // cellular membrane organization // traceable author statement /// 0048147 // negative regulation of fibroblast proliferation // inferred from direct assay /// 0055085 // transmembrane transport // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0060547 // negative regulation of necrotic cell death // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0008043 // intracellular ferritin complex // traceable author statement","0004322 // ferroxidase activity // inferred from electronic annotation /// 0005506 // iron ion binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008199 // ferric iron binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046914 // transition metal ion binding // inferred from electronic annotation","chr11:69482126-69490130 (-) // 99.68 // q13.3"]
["11725931_at",0.042743683,-0.011855125,0.10718584,0.0019893646,-0.0019898415,-0.15551853,0.57660687,0.19089487,1.0701882,0.09786448,1.0701882,"up","HSPA5",3309.0,"0002576 // platelet degranulation // traceable author statement /// 0006200 // ATP catabolic process // inferred from sequence or structural similarity /// 0006916 // anti-apoptosis // inferred from mutant phenotype /// 0006916 // anti-apoptosis // traceable author statement /// 0006983 // ER overload response // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0006987 // activation of signaling protein activity involved in unfolded protein response // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0021589 // cerebellum structural organization // inferred from electronic annotation /// 0021680 // cerebellar Purkinje cell layer development // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0030433 // ER-associated protein catabolic process // traceable author statement /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0031398 // positive regulation of protein ubiquitination // inferred from electronic annotation /// 0042149 // cellular response to glucose starvation // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0051603 // proteolysis involved in cellular protein catabolic process // inferred from electronic annotation /// 0060904 // regulation of protein folding in endoplasmic reticulum // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0005788 // endoplasmic reticulum lumen // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from direct assay /// 0008180 // signalosome // inferred from direct assay /// 0008303 // caspase complex // inferred from direct assay /// 0009986 // cell surface // inferred from direct assay /// 0009986 // cell surface // inferred from electronic annotation /// 0030176 // integral to endoplasmic reticulum membrane // inferred from direct assay /// 0030496 // midbody // inferred from direct assay /// 0034663 // endoplasmic reticulum chaperone complex // inferred from direct assay /// 0042470 // melanosome // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0005509 // calcium ion binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // non-traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from sequence or structural similarity /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0030674 // protein binding, bridging // non-traceable author statement /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0043022 // ribosome binding // inferred from electronic annotation /// 0043027 // cysteine-type endopeptidase inhibitor activity involved in apoptotic process // inferred from direct assay /// 0051082 // unfolded protein binding // traceable author statement /// 0051082 // unfolded protein binding // inferred from electronic annotation /// 0051087 // chaperone binding // traceable author statement /// 0051787 // misfolded protein binding // inferred from direct assay /// 0051787 // misfolded protein binding // inferred from electronic annotation","chr9:127997128-128003771 (-) // 89.6 // q33.3"]
["11716689_s_at",-0.03115654,0.03115654,0.09142828,-0.036116123,0.15442133,-0.08361292,0.9426887,0.8266093,1.013195,0.018911917,1.013195,"up","GOLGA3",2802.0,"0006891 // intra-Golgi vesicle-mediated transport // non-traceable author statement","0000139 // Golgi membrane // traceable author statement /// 0000139 // Golgi membrane // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005794 // Golgi apparatus // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0017119 // Golgi transport complex // inferred from direct assay /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation","0005215 // transporter activity // non-traceable author statement","chr12:133345501-133405439 (-) // 89.54 // q24.33"]
["11719213_s_at",-0.036681175,-0.017971039,0.0031900406,0.00454998,3.7956238E-4,-3.7956238E-4,0.56905615,0.18333758,-1.0130256,-0.018670691,1.0130256,"down","NOTCH2 /// NOTCH2NL","388677 /// 4853","0001709 // cell fate determination // traceable author statement /// 0001709 // cell fate determination // inferred from electronic annotation /// 0002011 // morphogenesis of an epithelial sheet // inferred from electronic annotation /// 0002437 // inflammatory response to antigenic stimulus // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006916 // anti-apoptosis // traceable author statement /// 0006917 // induction of apoptosis // traceable author statement /// 0006959 // humoral immune response // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from direct assay /// 0007219 // Notch signaling pathway // inferred from electronic annotation /// 0007219 // Notch signaling pathway // traceable author statement /// 0007220 // Notch receptor processing // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007275 // multicellular organismal development // non-traceable author statement /// 0007368 // determination of left/right symmetry // inferred from electronic annotation /// 0007399 // nervous system development // non-traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0009887 // organ morphogenesis // inferred from expression pattern /// 0010467 // gene expression // traceable author statement /// 0016049 // cell growth // inferred from direct assay /// 0019827 // stem cell maintenance // traceable author statement /// 0030097 // hemopoiesis // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030326 // embryonic limb morphogenesis // inferred from electronic annotation /// 0042246 // tissue regeneration // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0046579 // positive regulation of Ras protein signal transduction // inferred from direct assay /// 0046849 // bone remodeling // inferred from mutant phenotype /// 0050793 // regulation of developmental process // inferred from electronic annotation /// 0072602 // interleukin-4 secretion // inferred from electronic annotation","0000139 // Golgi membrane // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // non-traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr1:145208994-145286824 (+) // 82.03 // q21.1 /// chr1:120534486-120612390 (-) // 76.17 // p12"]
["11725033_a_at",-0.0739336,-0.004318714,0.061376095,-0.048134327,0.056521416,0.004319191,0.9508483,0.85147685,-1.0068585,-0.009860901,1.0068585,"down","SYP",6855.0,"0006810 // transport // inferred from electronic annotation /// 0006897 // endocytosis // inferred from sequence or structural similarity /// 0016188 // synaptic vesicle maturation // non-traceable author statement /// 0048169 // regulation of long-term neuronal synaptic plasticity // inferred from sequence or structural similarity /// 0048169 // regulation of long-term neuronal synaptic plasticity // inferred from electronic annotation /// 0048172 // regulation of short-term neuronal synaptic plasticity // inferred from sequence or structural similarity /// 0048172 // regulation of short-term neuronal synaptic plasticity // inferred from electronic annotation /// 0048499 // synaptic vesicle membrane organization // non-traceable author statement /// 0071310 // cellular response to organic substance // inferred from electronic annotation /// 2000474 // regulation of opioid receptor signaling pathway // inferred from sequence or structural similarity","0008021 // synaptic vesicle // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030285 // integral to synaptic vesicle membrane // non-traceable author statement /// 0030672 // synaptic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0042734 // presynaptic membrane // inferred from electronic annotation /// 0043229 // intracellular organelle // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0044306 // neuron projection terminus // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0048786 // presynaptic active zone // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation /// 0005509 // calcium ion binding // non-traceable author statement /// 0015485 // cholesterol binding // inferred from direct assay /// 0017075 // syntaxin-1 binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0042169 // SH2 domain binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from electronic annotation","chrX:49044267-49055496 (-) // 88.76 // p11.23"]
["11727848_a_at",0.012992859,-0.012992859,0.03538227,-0.044906616,0.030517578,-0.060173035,0.67601824,0.30698988,1.025728,0.03664819,1.025728,"up","GNA12",2768.0,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0006184 // GTP catabolic process // not recorded /// 0006184 // GTP catabolic process // traceable author statement /// 0007165 // signal transduction // non-traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007188 // adenylate cyclase-modulating G-protein coupled receptor signaling pathway // not recorded /// 0007243 // intracellular protein kinase cascade // inferred from electronic annotation /// 0007266 // Rho protein signal transduction // not recorded /// 0007266 // Rho protein signal transduction // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0042493 // response to drug // inferred from electronic annotation /// 0042733 // embryonic digit morphogenesis // inferred from electronic annotation","0005834 // heterotrimeric G-protein complex // not recorded /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0031234 // extrinsic to internal side of plasma membrane // not recorded /// 0031526 // brush border membrane // not recorded /// 0031526 // brush border membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // not recorded /// 0003924 // GTPase activity // traceable author statement /// 0004871 // signal transducer activity // not recorded /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0004871 // signal transducer activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0019001 // guanyl nucleotide binding // inferred from electronic annotation /// 0031683 // G-protein beta/gamma-subunit complex binding // not recorded /// 0031752 // D5 dopamine receptor binding // not recorded /// 0031752 // D5 dopamine receptor binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:2767742-2883962 (-) // 94.26 // p22.3"]
["11739614_at",0.025526047,0.030703545,0.0861702,-0.13914204,-0.025526047,-0.25545788,0.36870474,0.053462148,1.1387954,0.18750854,1.1387954,"up","CD3EAP",10849.0,"0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // traceable author statement /// 0009303 // rRNA transcription // inferred from electronic annotation /// 0009303 // rRNA transcription // traceable author statement","0000120 // RNA polymerase I transcription factor complex // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005730 // nucleolus // traceable author statement /// 0005736 // DNA-directed RNA polymerase I complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay","0003899 // DNA-directed RNA polymerase activity // inferred from electronic annotation","chr19:45909386-45955388 (+) // 71.15 // q13.32"]
["11728085_s_at",-0.007499695,-0.014179707,-0.016597033,0.058254004,0.11404371,0.007499695,0.42243323,0.07822648,-1.0516768,-0.072691336,1.0516768,"down","BMPR1B",658.0,"0001501 // skeletal system development // inferred from mutant phenotype /// 0001502 // cartilage condensation // non-traceable author statement /// 0001502 // cartilage condensation // inferred from electronic annotation /// 0001550 // ovarian cumulus expansion // inferred from sequence or structural similarity /// 0001550 // ovarian cumulus expansion // inferred from electronic annotation /// 0001654 // eye development // inferred from sequence or structural similarity /// 0001654 // eye development // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from electronic annotation /// 0007178 // transmembrane receptor protein serine/threonine kinase signaling pathway // inferred from mutant phenotype /// 0007178 // transmembrane receptor protein serine/threonine kinase signaling pathway // inferred from electronic annotation /// 0009953 // dorsal/ventral pattern formation // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0023014 // signal transduction by phosphorylation // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030501 // positive regulation of bone mineralization // inferred from mutant phenotype /// 0030509 // BMP signaling pathway // inferred from direct assay /// 0030509 // BMP signaling pathway // non-traceable author statement /// 0030509 // BMP signaling pathway // traceable author statement /// 0030509 // BMP signaling pathway // inferred from electronic annotation /// 0031290 // retinal ganglion cell axon guidance // inferred from electronic annotation /// 0035108 // limb morphogenesis // inferred from mutant phenotype /// 0042698 // ovulation cycle // inferred from sequence or structural similarity /// 0042698 // ovulation cycle // inferred from electronic annotation /// 0043010 // camera-type eye development // inferred from electronic annotation /// 0045597 // positive regulation of cell differentiation // inferred from mutant phenotype /// 0045669 // positive regulation of osteoblast differentiation // inferred from mutant phenotype /// 0051216 // cartilage development // inferred from electronic annotation /// 0060041 // retina development in camera-type eye // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // inferred by curator /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043235 // receptor complex // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004675 // transmembrane receptor protein serine/threonine kinase activity // inferred from mutant phenotype /// 0004675 // transmembrane receptor protein serine/threonine kinase activity // non-traceable author statement /// 0004675 // transmembrane receptor protein serine/threonine kinase activity // inferred from electronic annotation /// 0004702 // receptor signaling protein serine/threonine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005024 // transforming growth factor beta-activated receptor activity // inferred from electronic annotation /// 0005025 // transforming growth factor beta receptor activity, type I // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046332 // SMAD binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr4:95679118-96079599 (+) // 98.28 // q22.3"]
["11725145_a_at",-0.07658386,-7.343292E-5,0.2611308,-0.049482822,0.10749531,7.343292E-5,0.9030428,0.7264617,1.0296323,0.04212926,1.0296323,"up","MIS12",79003.0,"0000087 // M phase of mitotic cell cycle // traceable author statement /// 0000236 // mitotic prometaphase // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007059 // chromosome segregation // inferred from mutant phenotype /// 0007059 // chromosome segregation // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 0051382 // kinetochore assembly // inferred from direct assay","0000444 // MIS12/MIND type complex // inferred from direct assay /// 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0005515 // protein binding // inferred from physical interaction","chr17:5390184-5394131 (+) // 75.83 // p13.2"]
["11736786_s_at",-0.024563074,-0.073688745,0.024563074,0.13118005,-0.024563074,0.03901148,0.6255791,0.24262008,-1.0519788,-0.07310566,1.0519788,"down","CATSPER2",117155.0,"0001539 // ciliary or flagellar motility // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0009566 // fertilization // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030317 // sperm motility // inferred from electronic annotation /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0070588 // calcium ion transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0009434 // microtubule-based flagellum // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0019861 // flagellum // inferred from electronic annotation /// 0020017 // flagellar membrane // inferred from electronic annotation /// 0036128 // CatSper complex // inferred from sequence or structural similarity /// 0042995 // cell projection // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005262 // calcium channel activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr15:43922771-43941085 (-) // 93.77 // q15.3"]
["11715305_s_at",-0.044695854,-0.119348526,0.05216503,0.044695854,0.09508419,-0.07048988,0.76161915,0.43549287,-1.0427475,-0.06038985,1.0427475,"down","HOXA10",3206.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007275 // multicellular organismal development // traceable author statement /// 0007283 // spermatogenesis // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr7:27210210-27213955 (-) // 93.96 // p15.2"]
["11749623_s_at",0.05758381,0.03582287,-0.07063913,-0.0155386925,0.0155386925,-0.11146307,0.7778489,0.46193656,1.0314997,0.044743463,1.0314997,"up","TYW1 /// TYW1B","441250 /// 55253","0008033 // tRNA processing // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from electronic annotation /// 0010181 // FMN binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation /// 0051539 // 4 iron, 4 sulfur cluster binding // inferred from electronic annotation","chr7:66461854-66548504 (+) // 96.6 // q11.21 /// chr7:72193811-72298765 (-) // 99.91 // q11.22"]
["11744378_a_at",0.0030412674,0.018712044,-0.021644592,-0.0038757324,0.037934303,-0.0030412674,0.8475824,0.60007703,-1.007167,-0.010302893,1.007167,"down","KRT4",3851.0,"0007010 // cytoskeleton organization // non-traceable author statement /// 0030855 // epithelial cell differentiation // inferred from sequence or structural similarity /// 0030855 // epithelial cell differentiation // inferred from electronic annotation /// 0050680 // negative regulation of epithelial cell proliferation // inferred from sequence or structural similarity /// 0050680 // negative regulation of epithelial cell proliferation // inferred from electronic annotation","0005882 // intermediate filament // non-traceable author statement /// 0005882 // intermediate filament // inferred from electronic annotation /// 0045095 // keratin filament // inferred from electronic annotation","0005198 // structural molecule activity // non-traceable author statement /// 0005198 // structural molecule activity // inferred from electronic annotation","chr12:53200332-53208335 (-) // 90.63 // q13.13"]
["11744388_a_at",-0.006816387,0.006816387,0.076087475,-0.07709122,-0.114776134,0.23652983,0.97890264,0.9313705,1.0072871,0.010475007,1.0072871,"up","ARFRP1",10139.0,"0006184 // GTP catabolic process // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007369 // gastrulation // inferred from electronic annotation /// 0034067 // protein localization in Golgi apparatus // inferred from mutant phenotype /// 0042147 // retrograde transport, endosome to Golgi // inferred from mutant phenotype /// 0043001 // Golgi to plasma membrane protein transport // inferred from mutant phenotype","0005622 // intracellular // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005624 // membrane fraction // traceable author statement /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation","chr20:62330002-62339010 (-) // 94.92 // q13.33"]
["11758750_x_at",-0.009314537,0.023758888,0.009314537,-0.019904137,0.019508362,-0.014740944,0.7720808,0.4536986,1.0090272,0.012965126,1.0090272,"up","YWHAZ",7534.0,"0002553 // histamine secretion by mast cell // inferred from electronic annotation /// 0006605 // protein targeting // inferred from electronic annotation /// 0006626 // protein targeting to mitochondrion // inferred from electronic annotation /// 0006916 // anti-apoptosis // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0042493 // response to drug // inferred from electronic annotation","0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0031252 // cell leading edge // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0004497 // monooxygenase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0016301 // kinase activity // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation","chr8:101930804-101965594 (-) // 59.08 // q22.3"]
["11734587_x_at",0.040991306,-0.03587532,-0.14757681,0.03587532,-0.050454617,0.041302204,0.7499328,0.41649252,-1.0398638,-0.05639461,1.0398638,"down","BAGE2",85319.0,"","0005576 // extracellular region // inferred from electronic annotation","","chr21:11015382-11058323 (-) // 81.61 // p11.1"]
["11728810_a_at",0.008473396,-0.007847786,0.058092117,6.7710876E-4,-0.04744816,-6.7710876E-4,0.61975574,0.23545599,1.0248328,0.03538862,1.0248328,"up","ECHDC3",79746.0,"0008152 // metabolic process // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation","chr10:11784393-11806065 (+) // 92.77 // p14"]
["11758729_x_at",-0.070282936,0.007528305,0.0030670166,-2.8324127E-4,2.8324127E-4,-0.055832863,0.9906392,0.9692702,-1.0008911,-0.0012849979,1.0008911,"down","MT2A",4502.0,"0006878 // cellular copper ion homeostasis // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0035690 // cellular response to drug // inferred from direct assay /// 0036016 // cellular response to interleukin-3 // inferred from expression pattern /// 0036018 // cellular response to erythropoietin // inferred from expression pattern /// 0045926 // negative regulation of growth // inferred from sequence or structural similarity /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0071294 // cellular response to zinc ion // inferred from expression pattern","0005634 // nucleus // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005829 // cytosol // traceable author statement /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity","0005515 // protein binding // inferred from physical interaction /// 0008144 // drug binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:56641940-56643409 (+) // 83.88 // q12.2"]
["11763991_at",0.003269434,-0.09019709,0.051395416,0.010981798,-0.073782444,-0.0032691956,0.94939613,0.8460052,1.0070807,0.010179258,1.0070807,"up","LINC00514 /// LOC100507378","100507378 /// 283875","","","","chr16:3051546-3052017 (+) // 74.1 // p13.3"]
["11755207_a_at",-0.20520496,-0.16829824,-0.0572896,0.09908104,0.057290077,0.096764565,0.18078998,0.00801147,-1.1711909,-0.22797619,1.1711909,"down","NT5E",4907.0,"0006144 // purine base metabolic process // traceable author statement /// 0006164 // purine nucleotide biosynthetic process // inferred from electronic annotation /// 0006195 // purine nucleotide catabolic process // traceable author statement /// 0006196 // AMP catabolic process // inferred from electronic annotation /// 0006206 // pyrimidine base metabolic process // traceable author statement /// 0006259 // DNA metabolic process // traceable author statement /// 0009166 // nucleotide catabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046085 // adenosine metabolic process // inferred from electronic annotation /// 0046086 // adenosine biosynthetic process // inferred from electronic annotation /// 0046135 // pyrimidine nucleoside catabolic process // traceable author statement /// 0050728 // negative regulation of inflammatory response // inferred from electronic annotation /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement","0005624 // membrane fraction // inferred from electronic annotation /// 0005624 // membrane fraction // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031225 // anchored to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0008198 // ferrous iron binding // inferred from electronic annotation /// 0008253 // 5'-nucleotidase activity // not recorded /// 0008253 // 5'-nucleotidase activity // inferred from electronic annotation /// 0008253 // 5'-nucleotidase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016788 // hydrolase activity, acting on ester bonds // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:86159826-86205498 (+) // 92.66 // q14.3"]
["11751988_a_at",-0.002913475,-0.021806717,-0.08921623,0.002913475,0.0064783096,0.02868557,0.5162568,0.1381597,-1.0357467,-0.050671212,1.0357467,"down","NFE2L1",4779.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006783 // heme biosynthetic process // traceable author statement /// 0006954 // inflammatory response // traceable author statement /// 0009653 // anatomical structure morphogenesis // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003712 // transcription cofactor activity // traceable author statement /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation","chr17:46125703-46138125 (+) // 96.76 // q21.32"]
["11760603_at",0.039153576,-0.08674884,-7.677078E-4,0.10980344,-0.01909113,7.677078E-4,0.7652588,0.44164968,-1.0328382,-0.0466143,1.0328382,"down","HES2",54626.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from electronic annotation /// 0008134 // transcription factor binding // non-traceable author statement","chr1:6472516-6484730 (-) // 41.54 // p36.31"]
["11743884_a_at",-0.15546608,0.08683348,0.066390514,0.04183626,-0.16331148,-0.04183674,0.8530662,0.6122492,1.0379162,0.05368994,1.0379162,"up","ADPRHL1",113622.0,"0051725 // protein de-ADP-ribosylation // inferred from electronic annotation","","0000287 // magnesium ion binding // inferred from electronic annotation /// 0003875 // ADP-ribosylarginine hydrolase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr13:114076259-114103856 (-) // 97.83 // q34"]
["11724847_a_at",0.054879665,0.040795803,-0.14531302,-0.08191633,0.038226366,-0.038226366,0.96423036,0.8906174,1.0074859,0.0107596,1.0074859,"up","GBA3",57733.0,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006665 // sphingolipid metabolic process // traceable author statement /// 0006687 // glycosphingolipid metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0016139 // glycoside catabolic process // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement /// 0046477 // glycosylceramide catabolic process // inferred from mutant phenotype","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004553 // hydrolase activity, hydrolyzing O-glycosyl compounds // inferred from electronic annotation /// 0004565 // beta-galactosidase activity // inferred from direct assay /// 0008422 // beta-glucosidase activity // inferred from direct assay /// 0008422 // beta-glucosidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity, acting on glycosyl bonds // inferred from electronic annotation /// 0017042 // glycosylceramidase activity // inferred from direct assay /// 0043169 // cation binding // inferred from electronic annotation","chr4:22694536-22821191 (+) // 97.61 // p15.2"]
["11740094_a_at",-0.26189756,0.0,-0.13355637,0.14371371,0.1519885,0.0,0.39273122,0.06318574,-1.1731483,-0.23038536,1.1731483,"down","BEST1",7439.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006821 // chloride transport // inferred from direct assay /// 0006821 // chloride transport // inferred from electronic annotation /// 0007601 // visual perception // inferred from electronic annotation /// 0007601 // visual perception // traceable author statement /// 0030321 // transepithelial chloride transport // inferred from direct assay /// 0030321 // transepithelial chloride transport // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050908 // detection of light stimulus involved in visual perception // inferred from electronic annotation /// 0051924 // regulation of calcium ion transport // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from direct assay /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0034707 // chloride channel complex // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005254 // chloride channel activity // inferred from direct assay /// 0005254 // chloride channel activity // inferred from electronic annotation","chr11:61717355-61731934 (+) // 91.36 // q12.3"]
["11754013_x_at",-0.022130013,-0.007331848,-0.03831768,0.008542061,0.007331848,0.010764122,0.279774,0.025001217,-1.0220548,-0.03147254,1.0220548,"down","RPL15",6138.0,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral infectious cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0005840 // ribosome // traceable author statement /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0003735 // structural constituent of ribosome // traceable author statement","chr3:23958632-23961013 (+) // 91.05 // p24.2"]
["11729503_at",-0.1441505,-0.06061387,0.06061411,-0.06848621,0.09754324,0.18408513,0.6531231,0.27824008,-1.0860553,-0.11909754,1.0860553,"down","CCDC11",220136.0,"","","","chr18:47753562-47792892 (-) // 99.14 // q21.1"]
["11761656_at",-0.06406212,0.03149414,-0.03149414,0.033838272,0.15749931,-0.05869198,0.73474985,0.3934025,-1.0464978,-0.06556931,1.0464978,"down","FANCD2",2177.0,"0006281 // DNA repair // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007129 // synapsis // inferred from electronic annotation /// 0007276 // gamete generation // inferred from electronic annotation /// 0010332 // response to gamma radiation // inferred from direct assay","0000793 // condensed chromosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0005515 // protein binding // inferred from physical interaction","chr3:10070307-10083245 (+) // 63.56 // p25.3"]
["11752921_s_at",-0.008409023,-0.34793758,-0.1296606,0.008409023,0.07612324,0.17844248,0.43740642,0.08763182,-1.1889274,-0.24966063,1.1889274,"down","SPTY2D1",144108.0,"","","","chr11:18627952-18655894 (-) // 97.68 // p15.1"]
["11730654_at",-0.046875954,-0.08377838,-0.07094669,0.25022888,0.1894474,0.046875954,0.25752035,0.020009376,-1.1723347,-0.22938448,1.1723347,"down","C15orf62",643338.0,"","0005739 // mitochondrion // inferred from electronic annotation","","chr15:41060110-41064647 (+) // 91.92 // q15.1"]
["11726036_at",0.0033364296,0.017485619,-0.32921314,-0.023032665,-0.0033359528,0.040041447,0.74149257,0.4026682,-1.0772512,-0.1073547,1.0772512,"down","TRNAU1AP",54952.0,"0001514 // selenocysteine incorporation // inferred from sequence or structural similarity /// 0001514 // selenocysteine incorporation // inferred from electronic annotation /// 0006412 // translation // inferred from electronic annotation","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation","chr1:28879528-28905060 (+) // 98.42 // p35.3"]
["11753876_x_at",0.010806084,-0.029512405,0.026587486,-0.0073242188,-0.0035772324,0.0035772324,0.9263474,0.7805173,1.0035194,0.00506853,1.0035194,"up","POLR2L",5441.0,"0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006283 // transcription-coupled nucleotide-excision repair // traceable author statement /// 0006289 // nucleotide-excision repair // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006356 // regulation of transcription from RNA polymerase I promoter // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // inferred from direct assay /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006368 // transcription elongation from RNA polymerase II promoter // traceable author statement /// 0006370 // 7-methylguanosine mRNA capping // traceable author statement /// 0006383 // transcription from RNA polymerase III promoter // traceable author statement /// 0006385 // transcription elongation from RNA polymerase III promoter // traceable author statement /// 0006386 // termination of RNA polymerase III transcription // traceable author statement /// 0006468 // protein phosphorylation // inferred from direct assay /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0050434 // positive regulation of viral transcription // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005665 // DNA-directed RNA polymerase II, core complex // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003899 // DNA-directed RNA polymerase activity // inferred from electronic annotation /// 0003899 // DNA-directed RNA polymerase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:840371-842508 (-) // 98.04 // p15.5"]
["11756684_a_at",-0.03336382,0.07344198,-0.043696404,0.03336382,-0.34523344,0.05808878,0.8347612,0.572335,1.059503,0.08338761,1.059503,"up","DYNLRB2",83657.0,"0006810 // transport // inferred from electronic annotation /// 0007018 // microtubule-based movement // non-traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005868 // cytoplasmic dynein complex // inferred from sequence or structural similarity /// 0005868 // cytoplasmic dynein complex // non-traceable author statement /// 0005868 // cytoplasmic dynein complex // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0030286 // dynein complex // inferred from electronic annotation","0003774 // motor activity // inferred from electronic annotation /// 0003777 // microtubule motor activity // non-traceable author statement","chr16:80574924-80584544 (+) // 65.36 // q23.2"]
["11723939_a_at",0.007188797,-0.0016422272,0.0016422272,0.003709793,-0.06376076,-0.049108505,0.5090278,0.13358694,1.0272467,0.038782716,1.0272467,"up","CCNB1",891.0,"0000075 // cell cycle checkpoint // traceable author statement /// 0000079 // regulation of cyclin-dependent protein kinase activity // inferred from electronic annotation /// 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000086 // G2/M transition of mitotic cell cycle // non-traceable author statement /// 0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000236 // mitotic prometaphase // inferred from direct assay /// 0000278 // mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // inferred from electronic annotation /// 0001556 // oocyte maturation // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001933 // negative regulation of protein phosphorylation // inferred from electronic annotation /// 0006461 // protein complex assembly // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0007080 // mitotic metaphase plate congression // inferred from mutant phenotype /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0009636 // response to toxin // inferred from electronic annotation /// 0010629 // negative regulation of gene expression // inferred from electronic annotation /// 0016572 // histone phosphorylation // inferred from electronic annotation /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0031442 // positive regulation of mRNA 3'-end processing // inferred from electronic annotation /// 0033129 // positive regulation of histone phosphorylation // inferred from electronic annotation /// 0042246 // tissue regeneration // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0043148 // mitotic spindle stabilization // inferred from mutant phenotype /// 0045931 // positive regulation of mitotic cell cycle // inferred from mutant phenotype /// 0046680 // response to DDT // inferred from electronic annotation /// 0048565 // digestive tract development // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051726 // regulation of cell cycle // inferred from electronic annotation /// 0051987 // positive regulation of attachment of spindle microtubules to kinetochore // inferred from mutant phenotype /// 0055015 // ventricular cardiac muscle cell development // inferred from electronic annotation /// 0060045 // positive regulation of cardiac muscle cell proliferation // inferred from electronic annotation /// 0060623 // regulation of chromosome condensation // inferred from electronic annotation /// 0071174 // mitotic cell cycle spindle checkpoint // inferred from mutant phenotype /// 0071283 // cellular response to iron(III) ion // inferred from electronic annotation /// 0071398 // cellular response to fatty acid // inferred from electronic annotation /// 0071407 // cellular response to organic cyclic compound // inferred from electronic annotation /// 0071456 // cellular response to hypoxia // inferred from electronic annotation","0000922 // spindle pole // inferred from direct assay /// 0000942 // condensed nuclear chromosome outer kinetochore // inferred from direct assay /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation","0005113 // patched binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0016301 // kinase activity // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0035173 // histone kinase activity // inferred from electronic annotation","chr5:68462836-68474067 (+) // 90.74 // q13.2"]
["11741001_s_at",0.069946766,-0.24083853,0.027179241,-0.068216324,0.2124238,-0.02717948,0.8203667,0.54282475,-1.0620955,-0.086913526,1.0620955,"down","FAM13A",10144.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0005096 // GTPase activator activity // inferred from electronic annotation","chr4:89647105-89744512 (-) // 97.95 // q22.1"]
["11719650_a_at",0.056519985,0.06400108,-0.018477917,0.018478394,-0.028483868,-0.0652895,0.559405,0.17397837,1.0418248,0.05911271,1.0418248,"up","ARHGEF10",9639.0,"0022011 // myelination in peripheral nervous system // inferred from mutant phenotype /// 0033126 // positive regulation of GTP catabolic process // inferred from direct assay /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0051298 // centrosome duplication // inferred from mutant phenotype /// 0051496 // positive regulation of stress fiber assembly // inferred from mutant phenotype /// 0090307 // spindle assembly involved in mitosis // inferred from mutant phenotype","0005622 // intracellular // inferred from electronic annotation /// 0005625 // soluble fraction // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0005829 // cytosol // non-traceable author statement","0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from direct assay /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0019894 // kinesin binding // inferred from physical interaction","chr8:1791516-1906806 (+) // 96.21 // p23.3"]
["11755526_x_at",0.021034002,-0.19137096,-0.040800095,0.076191664,0.0027148724,-0.0027148724,0.6167138,0.23184462,-1.0686402,-0.09577624,1.0686402,"down","NDUFC2 /// NDUFC2-KCTD14","100532726 /// 4718","0006120 // mitochondrial electron transport, NADH to ubiquinone // non-traceable author statement /// 0006120 // mitochondrial electron transport, NADH to ubiquinone // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0022900 // electron transport chain // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051260 // protein homooligomerization // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005747 // mitochondrial respiratory chain complex I // inferred from direct assay /// 0005747 // mitochondrial respiratory chain complex I // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0070469 // respiratory chain // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0008137 // NADH dehydrogenase (ubiquinone) activity // non-traceable author statement /// 0008137 // NADH dehydrogenase (ubiquinone) activity // inferred from electronic annotation","chr11:77779394-77790887 (-) // 57.94 // q14.1"]
["11743220_at",0.10555959,0.015404224,0.028577805,-0.106903076,-0.015404224,-0.035667896,0.38650942,0.060361043,1.0736365,0.10250567,1.0736365,"up","NKX6-1",4825.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0003323 // type B pancreatic cell development // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0007224 // smoothened signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from electronic annotation /// 0009887 // organ morphogenesis // traceable author statement /// 0021912 // regulation of transcription from RNA polymerase II promoter involved in spinal cord motor neuron fate specification // inferred from electronic annotation /// 0021913 // regulation of transcription from RNA polymerase II promoter involved in ventral spinal cord interneuron specification // inferred from electronic annotation /// 0022008 // neurogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0031016 // pancreas development // inferred from sequence or structural similarity /// 0031018 // endocrine pancreas development // traceable author statement /// 0031018 // endocrine pancreas development // inferred from electronic annotation /// 0032024 // positive regulation of insulin secretion // inferred from electronic annotation /// 0035094 // response to nicotine // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from electronic annotation /// 0045686 // negative regulation of glial cell differentiation // inferred from electronic annotation /// 0045687 // positive regulation of glial cell differentiation // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0048709 // oligodendrocyte differentiation // inferred from electronic annotation /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from sequence or structural similarity /// 0051594 // detection of glucose // inferred from sequence or structural similarity /// 0071345 // cellular response to cytokine stimulus // inferred from electronic annotation /// 0071375 // cellular response to peptide hormone stimulus // inferred from electronic annotation /// 0072560 // type B pancreatic cell maturation // inferred from sequence or structural similarity /// 2000078 // positive regulation of type B pancreatic cell development // inferred from sequence or structural similarity","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0044424 // intracellular part // inferred from electronic annotation","0000976 // transcription regulatory region sequence-specific DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr4:85414388-85419603 (-) // 85.79 // q21.23"]
["11751898_a_at",-0.03516817,-0.005954504,0.17833161,-0.0017969608,0.14372182,0.0017969608,0.9939923,0.9802034,-1.001506,-0.0021710224,1.001506,"down","SCN8A",6334.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // non-traceable author statement /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007422 // peripheral nervous system development // inferred from sequence or structural similarity /// 0007517 // muscle organ development // inferred from electronic annotation /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0007628 // adult walking behavior // inferred from electronic annotation /// 0009636 // response to toxin // inferred from electronic annotation /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0035725 // sodium ion transmembrane transport // inferred from electronic annotation /// 0042552 // myelination // inferred from sequence or structural similarity /// 0055085 // transmembrane transport // inferred from electronic annotation","0001518 // voltage-gated sodium channel complex // inferred by curator /// 0001518 // voltage-gated sodium channel complex // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0030018 // Z disc // inferred from sequence or structural similarity /// 0030425 // dendrite // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0033268 // node of Ranvier // inferred from sequence or structural similarity /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043194 // initial segment // inferred from sequence or structural similarity","0000166 // nucleotide binding // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005248 // voltage-gated sodium channel activity // inferred from direct assay /// 0005248 // voltage-gated sodium channel activity // non-traceable author statement /// 0005248 // voltage-gated sodium channel activity // inferred from electronic annotation /// 0005272 // sodium channel activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation","chr12:52056601-52201213 (+) // 99.45 // q13.13"]
["11720516_a_at",-0.067687035,-0.027365685,0.13096714,0.027365685,0.08857536,-0.090688705,0.9898109,0.9668065,1.0024666,0.0035541116,1.0024666,"up","ZBTB4",57659.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:7362684-7387582 (-) // 92.78 // p13.1"]
["11743844_a_at",-0.02008152,0.085707426,-0.059431553,0.064997196,-0.028260946,0.02008152,0.9161767,0.7574432,-1.0117651,-0.016874412,1.0117651,"down","PROC",5624.0,"0006508 // proteolysis // non-traceable author statement /// 0006508 // proteolysis // traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0007596 // blood coagulation // inferred from electronic annotation /// 0007599 // hemostasis // inferred from electronic annotation /// 0017187 // peptidyl-glutamic acid carboxylation // traceable author statement /// 0030195 // negative regulation of blood coagulation // traceable author statement /// 0030195 // negative regulation of blood coagulation // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0050900 // leukocyte migration // traceable author statement","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0005796 // Golgi lumen // traceable author statement /// 0005886 // plasma membrane // traceable author statement","0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // traceable author statement /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr2:128175995-128186791 (+) // 87.49 // q14.3"]
["11738987_x_at",-0.0507946,-0.0474329,-0.016358376,0.068341255,0.016358376,0.055734634,0.20615323,0.011264451,-1.0606927,-0.0850067,1.0606927,"down","GABARAPL1",23710.0,"","0005622 // intracellular // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005776 // autophagic vacuole // inferred from direct assay /// 0005776 // autophagic vacuole // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0032590 // dendrite membrane // inferred from electronic annotation /// 0032839 // dendrite cytoplasm // inferred from electronic annotation /// 0044297 // cell body // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0048487 // beta-tubulin binding // inferred from sequence or structural similarity /// 0050811 // GABA receptor binding // inferred from sequence or structural similarity","chr12:10365107-10375731 (+) // 93.79 // p13.2"]
["11749716_a_at",0.19696426,-0.032010317,0.08066964,-0.42527437,-0.09019923,0.032010317,0.5706183,0.18471621,1.1834748,0.24302895,1.1834748,"up","SLC4A8",9498.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006811 // ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0006820 // anion transport // inferred from electronic annotation /// 0015701 // bicarbonate transport // traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation /// 0005452 // inorganic anion exchanger activity // inferred from electronic annotation /// 0008509 // anion transmembrane transporter activity // inferred from electronic annotation /// 0015297 // antiporter activity // inferred from electronic annotation /// 0015301 // anion:anion antiporter activity // inferred from electronic annotation","chr12:51818715-51868352 (+) // 95.71 // q13.13"]
["11743859_x_at",0.061534405,-0.08217478,-0.0130832195,0.0130832195,-0.13617659,0.052738667,0.95825946,0.8716631,1.0084995,0.012210373,1.0084995,"up","IL33",90865.0,"0002686 // negative regulation of leukocyte migration // inferred from electronic annotation /// 0002826 // negative regulation of T-helper 1 type immune response // inferred from electronic annotation /// 0002830 // positive regulation of type 2 immune response // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0032689 // negative regulation of interferon-gamma production // inferred from electronic annotation /// 0032736 // positive regulation of interleukin-13 production // inferred from electronic annotation /// 0032753 // positive regulation of interleukin-4 production // inferred from electronic annotation /// 0032754 // positive regulation of interleukin-5 production // inferred from electronic annotation /// 0032755 // positive regulation of interleukin-6 production // inferred from electronic annotation /// 0043032 // positive regulation of macrophage activation // inferred from direct assay /// 0043032 // positive regulation of macrophage activation // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0050729 // positive regulation of inflammatory response // inferred from sequence or structural similarity /// 0050729 // positive regulation of inflammatory response // inferred from electronic annotation /// 0051024 // positive regulation of immunoglobulin secretion // inferred from electronic annotation /// 0051025 // negative regulation of immunoglobulin secretion // inferred from electronic annotation /// 0090197 // positive regulation of chemokine secretion // inferred from direct assay /// 0090197 // positive regulation of chemokine secretion // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation","0005125 // cytokine activity // inferred from direct assay /// 0005125 // cytokine activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr9:6215776-6257982 (+) // 99.19 // p24.1"]
["11736872_a_at",0.4458263,-0.08044267,0.18704462,-0.10007548,0.08044267,-0.12906528,0.616306,0.23067649,1.1758538,0.23370875,1.1758538,"up","TRPC6",7225.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // traceable author statement /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0007204 // elevation of cytosolic calcium ion concentration // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0032236 // positive regulation of calcium ion transport via store-operated calcium channel activity // inferred from direct assay /// 0032414 // positive regulation of ion transmembrane transporter activity // inferred from direct assay /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0070588 // calcium ion transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0036057 // slit diaphragm // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005261 // cation channel activity // inferred from electronic annotation /// 0005262 // calcium channel activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0015279 // store-operated calcium channel activity // inferred from electronic annotation /// 0070679 // inositol 1,4,5 trisphosphate binding // inferred from direct assay","chr11:101322206-101454749 (-) // 98.35 // q22.1"]
["11737242_at",-0.09307051,0.06146002,0.016813755,-0.016813517,0.06422591,-0.059034824,0.99581814,0.98642343,-1.0007337,-0.0010581651,1.0007337,"down","TMEM233",387890.0,"0009607 // response to biotic stimulus // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr12:120031263-120080654 (+) // 67.61 // q24.23"]
["11734467_at",-0.132761,0.053176403,-0.1547513,-0.041737556,0.041737556,0.04716921,0.6408223,0.26217994,-1.0672033,-0.09383501,1.0672033,"down","FAM123B",139285.0,"0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0060828 // regulation of canonical Wnt receptor signaling pathway // inferred from mutant phenotype /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from mutant phenotype /// 0090263 // positive regulation of canonical Wnt receptor signaling pathway // inferred from mutant phenotype","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0005546 // phosphatidylinositol-4,5-bisphosphate binding // inferred from direct assay /// 0005546 // phosphatidylinositol-4,5-bisphosphate binding // inferred from mutant phenotype /// 0008013 // beta-catenin binding // inferred from direct assay /// 0008289 // lipid binding // inferred from electronic annotation","chrX:63404996-63425624 (-) // 96.65 // q11.2"]
["11751541_a_at",-0.0038490295,0.08199358,0.026324272,-0.009912014,0.0038490295,-0.02888012,0.5430556,0.15881783,1.0327353,0.04647059,1.0327353,"up","PDCD1",5133.0,"0006915 // apoptotic process // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006959 // humoral immune response // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007275 // multicellular organismal development // traceable author statement /// 0031295 // T cell costimulation // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr2:242792953-242795134 (-) // 70.07 // q37.3"]
["11762758_x_at",0.032528877,0.15016937,-0.05960512,-0.05429268,-0.032528877,0.032891273,0.7542717,0.42258126,1.0417491,0.05900788,1.0417491,"up","BAIAP2",10458.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007409 // axonogenesis // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0009617 // response to bacterium // inferred from mutant phenotype /// 0016358 // dendrite development // inferred from electronic annotation /// 0032956 // regulation of actin cytoskeleton organization // inferred from mutant phenotype /// 0046847 // filopodium assembly // inferred from electronic annotation /// 0048167 // regulation of synaptic plasticity // inferred from electronic annotation /// 0051017 // actin filament bundle assembly // inferred from electronic annotation","0001726 // ruffle // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from direct assay /// 0030175 // filopodium // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // traceable author statement /// 0008093 // cytoskeletal adaptor activity // inferred from electronic annotation /// 0008093 // cytoskeletal adaptor activity // traceable author statement /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0070064 // proline-rich region binding // inferred from direct assay","chr17:79071917-79082627 (+) // 99.86 // q25.3"]
["11752122_a_at",0.073574066,-0.033329487,-0.027837276,0.027837276,0.15837812,-0.03657055,0.81516445,0.5325675,-1.0322167,-0.04574583,1.0322167,"down","RALGDS",5900.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007265 // Ras protein signal transduction // traceable author statement /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0005083 // small GTPase regulator activity // inferred from direct assay /// 0005083 // small GTPase regulator activity // non-traceable author statement /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation","chr9:135973746-136006504 (-) // 94.11 // q34.2"]
["11746035_a_at",-0.0734601,0.0734601,-0.21711612,0.2073741,0.11065149,-0.22872114,0.82407016,0.54980594,-1.0733646,-0.10214023,1.0733646,"down","CCDC75",253635.0,"","","0003676 // nucleic acid binding // inferred from electronic annotation","chr2:37311654-37326352 (+) // 63.85 // p22.2"]
["11728051_at",-0.020581245,-0.16190338,0.21484184,0.020581245,-0.06914902,0.038814545,0.9711241,0.90860933,1.0097771,0.01403682,1.0097771,"up","FAM126B",285172.0,"","0005622 // intracellular // inferred from direct assay","","chr2:201838441-201936392 (-) // 89.74 // q33.1"]
["11747636_a_at",-0.065742016,-0.015951157,0.015892029,-0.015892029,0.015951157,0.06574154,0.64052653,0.26165625,-1.0308734,-0.043867193,1.0308734,"down","PLA2G6",8398.0,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0016042 // lipid catabolic process // inferred from electronic annotation /// 0032049 // cardiolipin biosynthetic process // inferred from mutant phenotype","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation","0004623 // phospholipase A2 activity // traceable author statement /// 0004623 // phospholipase A2 activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0047499 // calcium-independent phospholipase A2 activity // inferred from electronic annotation","chr22:38519210-38577837 (-) // 90.07 // q13.1"]
["11719777_at",0.090489864,-0.03542471,-0.2951374,0.03542471,-0.07351112,0.12406874,0.764709,0.44068107,-1.0782449,-0.10868493,1.0782449,"down","NDST1",3340.0,"0000165 // MAPK cascade // inferred from electronic annotation /// 0000271 // polysaccharide biosynthetic process // inferred from electronic annotation /// 0006477 // protein sulfation // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from electronic annotation /// 0007224 // smoothened signaling pathway // inferred from electronic annotation /// 0007585 // respiratory gaseous exchange // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0015012 // heparan sulfate proteoglycan biosynthetic process // inferred from electronic annotation /// 0015012 // heparan sulfate proteoglycan biosynthetic process // traceable author statement /// 0030203 // glycosaminoglycan metabolic process // inferred from electronic annotation /// 0030210 // heparin biosynthetic process // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation /// 0030901 // midbrain development // inferred from electronic annotation /// 0048702 // embryonic neurocranium morphogenesis // inferred from electronic annotation /// 0048703 // embryonic viscerocranium morphogenesis // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0008146 // sulfotransferase activity // inferred from electronic annotation /// 0015016 // [heparan sulfate]-glucosamine N-sulfotransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0019213 // deacetylase activity // inferred from electronic annotation","chr5:149887673-149937772 (+) // 84.54 // q33.1"]
["11761718_at",0.0015785694,-0.001578331,-0.037763357,0.05452442,-0.12176657,0.19449687,0.83920723,0.5835459,-1.0388634,-0.055005994,1.0388634,"down",-0.001578331,-0.037763357,"TMEM135",65084.0,"0007031 // peroxisome organization // inferred from sequence or structural similarity","0005777 // peroxisome // inferred from sequence or structural similarity /// 0005777 // peroxisome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation"]
["11762655_at",0.057160616,-0.057160378,-0.13703132,-0.18326283,0.1090703,0.08165741,0.8840444,0.6812016,-1.0339493,-0.04816538,1.0339493,"down","RSPH10B2",728194.0,"0016310 // phosphorylation // inferred from electronic annotation","","0016301 // kinase activity // inferred from electronic annotation","chr7:6800944-6836561 (+) // 97.58 // p22.1 /// chr7:5967662-6003113 (-) // 97.58 // p22.1"]
["11763292_at",4.506111E-4,-0.07394838,-0.11861372,0.015159607,-4.506111E-4,0.07822943,0.4375647,0.087707825,-1.0680777,-0.09501658,1.0680777,"down","ENDOV /// LOC100507440","100507440 /// 284131","0006281 // DNA repair // inferred from sequence or structural similarity /// 0006281 // DNA repair // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation","","0000287 // magnesium ion binding // inferred from sequence or structural similarity /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004519 // endonuclease activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016888 // endodeoxyribonuclease activity, producing 5'-phosphomonoesters // inferred from sequence or structural similarity /// 0016888 // endodeoxyribonuclease activity, producing 5'-phosphomonoesters // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:78389114-78404173 (+) // 98.24 // q25.3"]
["11757395_s_at",0.027299881,1.1444092E-5,0.15777302,-0.03689289,-0.03757572,-1.1444092E-5,0.5437703,0.16012767,1.0618069,0.08652145,1.0618069,"up","MCM3AP",8888.0,"0006260 // DNA replication // traceable author statement /// 0006606 // protein import into nucleus // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement","chr21:47653638-47656818 (-) // 59.93 // q22.3"]
["11738129_x_at",-0.031773806,0.16633987,-0.26322675,0.19448376,-0.20864272,0.031773567,0.9289719,0.78926647,-1.0343744,-0.048758414,1.0343744,"down","SARDH",1757.0,"0006546 // glycine catabolic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // inferred from electronic annotation /// 0005759 // mitochondrial matrix // non-traceable author statement","0004047 // aminomethyltransferase activity // inferred from electronic annotation /// 0008480 // sarcosine dehydrogenase activity // inferred from electronic annotation /// 0008480 // sarcosine dehydrogenase activity // traceable author statement /// 0009055 // electron carrier activity // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0050660 // flavin adenine dinucleotide binding // inferred from electronic annotation","chr9:136528685-136603512 (-) // 96.88 // q34.2"]
["11759569_a_at",-0.006239414,-0.027413368,0.006239891,-0.06783104,0.06315708,0.02654934,0.8935553,0.70395386,-1.0114532,-0.016429499,1.0114532,"down","CDK5RAP3",80279.0,"0000079 // regulation of cyclin-dependent protein kinase activity // inferred from sequence or structural similarity /// 0007420 // brain development // non-traceable author statement /// 0045664 // regulation of neuron differentiation // non-traceable author statement","","0005515 // protein binding // inferred from physical interaction","chr17:46048487-46059138 (+) // 90.95 // q21.32"]
["11753054_at",0.06271863,-0.03739953,-0.11729646,-0.21889591,0.14416432,0.03739953,0.9632478,0.8863752,-1.0127058,-0.018215124,1.0127058,"down","LOC643797",643797.0,"","0005576 // extracellular region // inferred from electronic annotation","","chr15:93257423-93258687 (+) // 77.08 // q26.1"]
["11736593_a_at",-0.12064886,1.039505E-4,-0.07948756,0.063033104,0.11470723,-1.039505E-4,0.38709596,0.06053313,-1.0911803,-0.12588954,1.0911803,"down","LDB3",11155.0,"","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0030018 // Z disc // inferred from electronic annotation /// 0031143 // pseudopodium // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008092 // cytoskeletal protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr10:88428320-88499197 (+) // 89.33 // q23.2"]
["11728461_a_at",-0.02604866,0.02604866,0.097881794,-0.07267618,-0.055937767,0.041233063,0.66175187,0.28862143,1.0437341,0.061754182,1.0437341,"up","CARD9 /// DNLZ","64170 /// 728489","0007249 // I-kappaB kinase/NF-kappaB cascade // inferred from electronic annotation /// 0009620 // response to fungus // inferred from electronic annotation /// 0032494 // response to peptidoglycan // inferred from electronic annotation /// 0032495 // response to muramyl dipeptide // inferred from electronic annotation /// 0032755 // positive regulation of interleukin-6 production // inferred from electronic annotation /// 0032760 // positive regulation of tumor necrosis factor production // inferred from electronic annotation /// 0032874 // positive regulation of stress-activated MAPK cascade // inferred from direct assay /// 0032874 // positive regulation of stress-activated MAPK cascade // inferred from electronic annotation /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0042493 // response to drug // inferred from electronic annotation /// 0042534 // regulation of tumor necrosis factor biosynthetic process // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from expression pattern /// 0043330 // response to exogenous dsRNA // inferred from electronic annotation /// 0045076 // regulation of interleukin-2 biosynthetic process // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045089 // positive regulation of innate immune response // inferred from electronic annotation /// 0045408 // regulation of interleukin-6 biosynthetic process // inferred from electronic annotation /// 0046330 // positive regulation of JNK cascade // inferred from direct assay /// 0046330 // positive regulation of JNK cascade // inferred from electronic annotation /// 0050830 // defense response to Gram-positive bacterium // inferred from electronic annotation /// 0051607 // defense response to virus // inferred from electronic annotation /// 0070423 // nucleotide-binding oligomerization domain containing signaling pathway // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050700 // CARD domain binding // inferred from physical interaction","chr9:139256352-139258263 (-) // 90.54 // q34.3"]
["11720031_a_at",-0.03317213,0.011171818,0.009510517,-0.00951004,-0.012462139,0.035130978,0.89491606,0.7068204,-1.0059437,-0.0085495,1.0059437,"down","TRIM29",23650.0,"0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:119981994-120056148 (-) // 98.13 // q23.3"]
["11730802_at",-0.13161421,0.066389084,-0.15014648,-0.02671194,0.02671194,0.09411669,0.634611,0.25453916,-1.0741256,-0.103162766,1.0741256,"down","CRNN",49860.0,"0009408 // response to heat // inferred from direct assay /// 0016337 // cell-cell adhesion // inferred from direct assay","0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay","0005509 // calcium ion binding // non-traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation","chr1:152381719-152384724 (-) // 94.4 // q21.3"]
["11762314_a_at",-0.006117344,-0.031726837,0.006117344,0.03527403,0.0450058,-0.04435587,0.7978349,0.4996987,-1.0157535,-0.022550346,1.0157535,"down","C11orf74",119710.0,"","","","chr11:36616066-36669705 (+) // 66.44 // p12"]
["11729237_a_at",-0.046548843,0.09700203,0.09260559,-0.0052986145,-0.008131027,0.0052986145,0.7054594,0.3468098,1.0355495,0.050396547,1.0355495,"up","MCCC2",64087.0,"0006552 // leucine catabolic process // inferred from electronic annotation /// 0006552 // leucine catabolic process // traceable author statement /// 0009083 // branched chain family amino acid catabolic process // traceable author statement /// 0015936 // coenzyme A metabolic process // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005739 // mitochondrion // non-traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005759 // mitochondrial matrix // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004485 // methylcrotonoyl-CoA carboxylase activity // non-traceable author statement /// 0004485 // methylcrotonoyl-CoA carboxylase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation","chr5:70883114-70954528 (+) // 64.5 // q13.2"]
["11761520_x_at",0.08535719,-0.16897726,-0.23493338,0.095378876,-0.061759472,0.061759472,0.64925253,0.27316606,-1.1003613,-0.13797736,1.1003613,"down","ZNF587B",1.00293516E8,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:58341661-58353164 (+) // 86.42 // q13.43"]
["11738236_a_at",-0.08764672,0.10049772,-0.06487179,0.034522533,0.17056203,-0.034522533,0.7587941,0.4296205,-1.0527729,-0.07419423,1.0527729,"down","LOC100507472 /// PCSK6","100507472 /// 5046","0006508 // proteolysis // inferred from electronic annotation /// 0007354 // zygotic determination of anterior/posterior axis, embryo // inferred from electronic annotation /// 0007368 // determination of left/right symmetry // inferred from electronic annotation /// 0009100 // glycoprotein metabolic process // inferred from direct assay /// 0016485 // protein processing // inferred from direct assay /// 0016486 // peptide hormone processing // inferred from direct assay /// 0030510 // regulation of BMP signaling pathway // traceable author statement /// 0032455 // nerve growth factor processing // traceable author statement /// 0032902 // nerve growth factor production // inferred from direct assay /// 0032940 // secretion by cell // inferred from direct assay /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005625 // soluble fraction // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005796 // Golgi lumen // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from direct assay","0004175 // endopeptidase activity // inferred from direct assay /// 0004252 // serine-type endopeptidase activity // inferred from direct assay /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0008201 // heparin binding // inferred from direct assay /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0043499 // eukaryotic cell surface binding // inferred from direct assay /// 0048406 // nerve growth factor binding // inferred from direct assay","chr15:101886922-102030187 (-) // 89.91 // q26.3"]
["11715711_a_at",0.0029315948,-0.0029315948,0.054344177,-0.04525757,0.018671036,-0.0120744705,0.66902924,0.2976949,1.0217214,0.031001808,1.0217214,"up","AKR1C3",8644.0,"0000060 // protein import into nucleus, translocation // inferred from direct assay /// 0006693 // prostaglandin metabolic process // inferred from expression pattern /// 0006693 // prostaglandin metabolic process // traceable author statement /// 0006693 // prostaglandin metabolic process // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from direct assay /// 0007584 // response to nutrient // inferred from expression pattern /// 0008202 // steroid metabolic process // inferred from expression pattern /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0008584 // male gonad development // inferred from expression pattern /// 0009267 // cellular response to starvation // inferred from expression pattern /// 0010942 // positive regulation of cell death // inferred from direct assay /// 0016488 // farnesol catabolic process // inferred from direct assay /// 0030216 // keratinocyte differentiation // inferred from expression pattern /// 0034614 // cellular response to reactive oxygen species // inferred from direct assay /// 0034694 // response to prostaglandin stimulus // inferred from direct assay /// 0042448 // progesterone metabolic process // inferred from direct assay /// 0042574 // retinal metabolic process // inferred from direct assay /// 0044259 // multicellular organismal macromolecule metabolic process // inferred from expression pattern /// 0044597 // daunorubicin metabolic process // inferred from mutant phenotype /// 0044598 // doxorubicin metabolic process // inferred from mutant phenotype /// 0048385 // regulation of retinoic acid receptor signaling pathway // inferred from direct assay /// 0051897 // positive regulation of protein kinase B signaling cascade // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from direct assay /// 0055114 // oxidation-reduction process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0061370 // testosterone biosynthetic process // inferred from mutant phenotype /// 0070293 // renal absorption // non-traceable author statement /// 0071276 // cellular response to cadmium ion // inferred from direct assay /// 0071277 // cellular response to calcium ion // inferred from direct assay /// 0071379 // cellular response to prostaglandin stimulus // inferred from direct assay /// 0071384 // cellular response to corticosteroid stimulus // inferred from direct assay /// 0071395 // cellular response to jasmonic acid stimulus // inferred from direct assay /// 1900053 // negative regulation of retinoic acid biosynthetic process // inferred from direct assay /// 2000224 // regulation of testosterone biosynthetic process // inferred from mutant phenotype /// 2000353 // positive regulation of endothelial cell apoptotic process // inferred from direct assay /// 2000379 // positive regulation of reactive oxygen species metabolic process // inferred from direct assay","0005622 // intracellular // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0001758 // retinal dehydrogenase activity // inferred from direct assay /// 0004032 // alditol:NADP+ 1-oxidoreductase activity // inferred from direct assay /// 0004033 // aldo-keto reductase (NADP) activity // traceable author statement /// 0004745 // retinol dehydrogenase activity // inferred from direct assay /// 0004958 // prostaglandin F receptor activity // inferred from direct assay /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016655 // oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor // inferred from direct assay /// 0018636 // phenanthrene 9,10-monooxygenase activity // inferred from direct assay /// 0035410 // dihydrotestosterone 17-beta-dehydrogenase activity // inferred from direct assay /// 0036131 // prostaglandin D2 11-ketoreductase activity // inferred from electronic annotation /// 0045550 // geranylgeranyl reductase activity // inferred from direct assay /// 0045703 // ketoreductase activity // inferred from direct assay /// 0047017 // prostaglandin-F synthase activity // inferred from electronic annotation /// 0047020 // 15-hydroxyprostaglandin-D dehydrogenase (NADP+) activity // inferred from direct assay /// 0047023 // androsterone dehydrogenase activity // inferred from direct assay /// 0047026 // androsterone dehydrogenase (A-specific) activity // inferred from electronic annotation /// 0047045 // testosterone 17-beta-dehydrogenase (NADP+) activity // inferred from electronic annotation /// 0047086 // ketosteroid monooxygenase activity // inferred from direct assay /// 0047115 // trans-1,2-dihydrobenzene-1,2-diol dehydrogenase activity // inferred from electronic annotation /// 0047718 // indanol dehydrogenase activity // inferred from electronic annotation /// 0047787 // delta4-3-oxosteroid 5beta-reductase activity // inferred from direct assay /// 0050327 // testosterone 17-beta-dehydrogenase (NAD+) activity // inferred from electronic annotation","chr10:5135984-5149878 (+) // 93.02 // p15.1"]
["11729708_a_at",-0.0029141903,0.028502703,-0.30194283,0.0029139519,-0.14699578,0.08351946,0.84564006,0.5960996,-1.0511224,-0.071930714,1.0511224,"down","CSMD1",64478.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr8:2792875-4852399 (-) // 98.75 // p23.2"]
["11756883_s_at",0.0028858185,-0.009760857,0.025234222,0.017692566,-0.0028858185,-0.02525711,0.838527,0.5824685,1.0066786,0.009603124,1.0066786,"up","PRRC2C",23215.0,"","","0008022 // protein C-terminus binding // inferred from physical interaction","chr1:171510968-171562649 (+) // 88.42 // q24.3"]
["11732369_a_at",0.16265869,0.043694496,-0.043694496,-0.13286757,0.20045638,-0.08229613,0.86894214,0.6473043,1.0418315,0.05912195,1.0418315,"up","FGF14",2259.0,"0007165 // signal transduction // traceable author statement /// 0007254 // JNK cascade // inferred from physical interaction /// 0007267 // cell-cell signaling // traceable author statement /// 0007399 // nervous system development // traceable author statement /// 0008219 // cell death // inferred from electronic annotation /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation","0005104 // fibroblast growth factor receptor binding // inferred from direct assay /// 0008083 // growth factor activity // inferred from electronic annotation /// 0008083 // growth factor activity // traceable author statement /// 0008201 // heparin binding // inferred from direct assay","chr13:102373204-103054267 (-) // 99.27 // q33.1"]
["11732274_at",-3.0851364E-4,3.0851364E-4,-0.2677412,0.16434336,-0.038681507,0.016701221,0.6494542,0.27382046,-1.0993886,-0.13670142,1.0993886,"down","ELMOD2",255520.0,"0006909 // phagocytosis // inferred from electronic annotation /// 0009615 // response to virus // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from direct assay /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0050688 // regulation of defense response to virus // inferred from direct assay","0005856 // cytoskeleton // inferred from electronic annotation","0005096 // GTPase activator activity // inferred from direct assay /// 0005096 // GTPase activator activity // inferred from electronic annotation","chr4:141445311-141474924 (+) // 96.67 // q31.1"]
["11735900_s_at",0.070314884,-0.06992388,0.0040409565,-0.16614485,-0.004041195,0.09692311,0.9260802,0.7799589,1.0181134,0.025898226,1.0181134,"up","HS3ST4",9951.0,"0030201 // heparan sulfate proteoglycan metabolic process // non-traceable author statement","0000139 // Golgi membrane // inferred from electronic annotation /// 0005576 // extracellular region // non-traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008146 // sulfotransferase activity // inferred from electronic annotation /// 0008467 // [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity // non-traceable author statement /// 0008467 // [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr16:25703346-26149006 (+) // 87.63 // p12.1"]
["11754695_a_at",3.490448E-4,-3.490448E-4,-0.1379745,3.490448E-4,0.112642765,-0.14474773,0.8948447,0.7066184,-1.0248454,-0.03540624,1.0248454,"down","PLA2G5",5322.0,"0006644 // phospholipid metabolic process // traceable author statement /// 0006644 // phospholipid metabolic process // inferred from electronic annotation /// 0006663 // platelet activating factor biosynthetic process // inferred from electronic annotation /// 0016042 // lipid catabolic process // inferred from electronic annotation /// 0019370 // leukotriene biosynthetic process // inferred from electronic annotation /// 0034097 // response to cytokine stimulus // inferred from electronic annotation /// 0050482 // arachidonic acid secretion // inferred from electronic annotation /// 0051591 // response to cAMP // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0004623 // phospholipase A2 activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0008201 // heparin binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047498 // calcium-dependent phospholipase A2 activity // inferred from electronic annotation /// 0047498 // calcium-dependent phospholipase A2 activity // traceable author statement","chr1:20395363-20417683 (+) // 54.75 // p36.13"]
["11744793_x_at",7.123947E-4,0.0068798065,0.12790012,-7.123947E-4,-0.054341316,-0.09060383,0.5015724,0.12808222,1.0671157,0.093716554,1.0671157,"up","DLGAP5",9787.0,"0000087 // M phase of mitotic cell cycle // inferred from direct assay /// 0000087 // M phase of mitotic cell cycle // inferred from sequence or structural similarity /// 0007049 // cell cycle // inferred from electronic annotation /// 0007079 // mitotic chromosome movement towards spindle pole // non-traceable author statement /// 0007267 // cell-cell signaling // inferred from electronic annotation /// 0008283 // cell proliferation // non-traceable author statement /// 0045842 // positive regulation of mitotic metaphase/anaphase transition // non-traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0031616 // spindle pole centrosome // inferred from direct assay /// 0031616 // spindle pole centrosome // inferred from sequence or structural similarity","0004721 // phosphoprotein phosphatase activity // inferred from direct assay /// 0004721 // phosphoprotein phosphatase activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction","chr14:55614829-55658273 (-) // 96.8 // q22.3"]
["11732617_at",-0.008858681,0.008858681,0.07534695,0.025352001,-0.028200626,-0.07061148,0.63868284,0.2595332,1.0349796,0.049602307,1.0349796,"up","TTLL10",254173.0,"0006464 // cellular protein modification process // inferred from electronic annotation /// 0018094 // protein polyglycylation // inferred from direct assay","0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0031965 // nuclear membrane // inferred from direct assay","0004835 // tubulin-tyrosine ligase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0070735 // protein-glycine ligase activity // inferred from direct assay","chr1:1115077-1121241 (+) // 96.1 // p36.33"]
["11723790_a_at",0.006281376,-0.06619668,-0.03609395,0.056788206,0.024004221,-0.0062816143,0.47607344,0.11048995,-1.040185,-0.056840103,1.040185,"down","SNCB",6620.0,"0042417 // dopamine metabolic process // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0019717 // synaptosome // inferred from electronic annotation /// 0043195 // terminal button // inferred from electronic annotation /// 0043679 // axon terminus // inferred from electronic annotation","0004859 // phospholipase inhibitor activity // traceable author statement /// 0005509 // calcium ion binding // inferred from direct assay","chr5:176047082-176057557 (-) // 88.92 // q35.2"]
["11732101_at",0.04790044,-0.04352212,0.05461669,-0.080198765,0.04352212,-0.05276513,0.72052205,0.37045464,1.0348911,0.049479004,1.0348911,"up","IQCF6",440956.0,"","","","chr3:51812576-51813203 (-) // 100.0 // p21.2"]
["11752348_a_at",-0.041452646,0.1131022,-0.11456847,0.041452885,0.05999446,-0.21212769,0.95000005,0.8480068,1.0157794,0.022587087,1.0157794,"up","TBC1D30",23329.0,"0032313 // regulation of Rab GTPase activity // inferred from electronic annotation /// 0032851 // positive regulation of Rab GTPase activity // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005097 // Rab GTPase activator activity // inferred from electronic annotation","chr12:65218446-65270940 (+) // 95.68 // q14.3"]
["11763278_s_at",0.026931763,-0.11143017,-0.11823559,0.007945061,0.1112175,-0.007945061,0.5415223,0.15749872,-1.0752338,-0.104650415,1.0752338,"down","FGFR1OP2",26127.0,"0009611 // response to wounding // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","","chr12:27091412-27119580 (+) // 96.5 // p11.23"]
["11728277_x_at",0.03194809,0.04574299,0.11508179,-0.08102894,-0.03194809,-0.051671028,0.23494153,0.015463,1.0860875,0.11914029,1.0860875,"up","PLA2G12A",81579.0,"0006644 // phospholipid metabolic process // inferred from electronic annotation /// 0016042 // lipid catabolic process // inferred from electronic annotation","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation","0004623 // phospholipase A2 activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047498 // calcium-dependent phospholipase A2 activity // non-traceable author statement","chr4:110630696-110651236 (-) // 67.74 // q25"]
["11727469_x_at",0.0197258,-0.045327187,-0.06553841,-0.0197258,0.068707466,0.03659892,0.56678855,0.18151787,-1.0416762,-0.058906842,1.0416762,"down","MAGEA4",4103.0,"","","0005515 // protein binding // inferred from physical interaction","chrX:151080980-151093642 (+) // 97.54 // q28"]
["11725580_at",-0.0055241585,0.051421642,-0.026564598,0.03704834,-0.04722166,0.0055241585,0.9422414,0.82499075,1.0055565,0.007994094,1.0055565,"up","BEND3",57673.0,"","","","chr6:107386383-107435636 (-) // 98.39 // q21"]
["11752450_a_at",-0.12052679,0.19054651,0.2164464,-0.19682884,0.037770033,-0.037770033,0.6529719,0.27809978,1.1181381,0.16109835,1.1181381,"up","UNC13B",10497.0,"0006887 // exocytosis // inferred from electronic annotation /// 0006917 // induction of apoptosis // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007268 // synaptic transmission // inferred from electronic annotation /// 0007588 // excretion // traceable author statement /// 0016081 // synaptic vesicle docking involved in exocytosis // inferred from electronic annotation /// 0016082 // synaptic vesicle priming // inferred from electronic annotation /// 0035249 // synaptic transmission, glutamatergic // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0048172 // regulation of short-term neuronal synaptic plasticity // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0004871 // signal transducer activity // traceable author statement /// 0004872 // receptor activity // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:35162019-35377692 (+) // 94.3 // p13.3"]
["11723287_at",-0.01702118,0.01702118,-0.3104639,-0.09624672,0.08717966,0.0480361,0.7255764,0.37937024,-1.0840849,-0.116477706,1.0840849,"down","TYROBP",7305.0,"0002281 // macrophage activation involved in immune response // inferred from electronic annotation /// 0002283 // neutrophil activation involved in immune response // inferred from electronic annotation /// 0006968 // cellular defense response // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007229 // integrin-mediated signaling pathway // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0035556 // intracellular signal transduction // traceable author statement /// 0050776 // regulation of immune response // traceable author statement","0005622 // intracellular // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005057 // receptor signaling protein activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction","chr19:36395299-36399202 (-) // 87.05 // q13.12"]
["11752068_a_at",-0.0056533813,0.038142204,0.037457943,0.0056533813,-0.030689716,-0.14971018,0.55659294,0.17203875,1.0581648,0.08156438,1.0581648,"up","UBAP2",55833.0,"","","","chr9:33922308-34048885 (-) // 99.9 // p13.3"]
["11717492_x_at",-0.028676987,-0.03563881,0.06869984,0.011876106,0.017281532,-0.011876106,0.9708074,0.9077695,-1.0029844,-0.0042991736,1.0029844,"down","DYNLRB1",83658.0,"0006810 // transport // inferred from electronic annotation /// 0007018 // microtubule-based movement // non-traceable author statement /// 0007632 // visual behavior // inferred from sequence or structural similarity","0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005868 // cytoplasmic dynein complex // inferred from sequence or structural similarity /// 0005868 // cytoplasmic dynein complex // non-traceable author statement /// 0005868 // cytoplasmic dynein complex // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0030286 // dynein complex // inferred from electronic annotation","0003774 // motor activity // inferred from electronic annotation /// 0003777 // microtubule motor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from electronic annotation","chr20:33104226-33128762 (+) // 75.48 // q11.22"]
["11757432_s_at",-0.050852776,-0.010611534,0.06076622,-0.05716133,0.026836395,0.010611534,0.96311635,0.88615674,1.0044031,0.006338407,1.0044031,"up","EBAG9",9166.0,"0001558 // regulation of cell growth // non-traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005925 // focal adhesion // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0016505 // apoptotic protease activator activity // non-traceable author statement","chr8:110576418-110577389 (+) // 77.96 // q23.2"]
["11741870_a_at",-0.14725041,-0.099345684,0.018150091,-0.018150091,0.04411912,0.063522816,0.49933684,0.12609026,-1.0762247,-0.1059793,1.0762247,"down","PARK2",5071.0,"0000209 // protein polyubiquitination // inferred from direct assay /// 0000422 // mitochondrion degradation // inferred from mutant phenotype /// 0001933 // negative regulation of protein phosphorylation // inferred from direct assay /// 0001963 // synaptic transmission, dopaminergic // inferred from electronic annotation /// 0001964 // startle response // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0006511 // ubiquitin-dependent protein catabolic process // traceable author statement /// 0006513 // protein monoubiquitination // inferred from direct assay /// 0006914 // autophagy // inferred from electronic annotation /// 0007417 // central nervous system development // traceable author statement /// 0007612 // learning // inferred from electronic annotation /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0008219 // cell death // inferred from direct assay /// 0008219 // cell death // inferred from electronic annotation /// 0008344 // adult locomotory behavior // inferred from electronic annotation /// 0010506 // regulation of autophagy // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0019538 // protein metabolic process // inferred from electronic annotation /// 0032232 // negative regulation of actin filament bundle assembly // inferred from direct assay /// 0035249 // synaptic transmission, glutamatergic // inferred from electronic annotation /// 0042415 // norepinephrine metabolic process // inferred from electronic annotation /// 0042417 // dopamine metabolic process // inferred from electronic annotation /// 0042787 // protein ubiquitination involved in ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from direct assay /// 0043524 // negative regulation of neuron apoptotic process // inferred from direct assay /// 0043526 // neuroprotection // inferred from direct assay /// 0046928 // regulation of neurotransmitter secretion // inferred from electronic annotation /// 0050804 // regulation of synaptic transmission // inferred from electronic annotation /// 0051583 // dopamine uptake involved in synaptic transmission // inferred from electronic annotation /// 0051865 // protein autoubiquitination // inferred from direct assay /// 0060548 // negative regulation of cell death // inferred from direct assay /// 0070534 // protein K63-linked ubiquitination // inferred from direct assay /// 0070842 // aggresome assembly // inferred from mutant phenotype /// 0070936 // protein K48-linked ubiquitination // inferred from direct assay /// 0070997 // neuron death // inferred from direct assay /// 0090201 // negative regulation of release of cytochrome c from mitochondria // inferred from direct assay /// 2000377 // regulation of reactive oxygen species metabolic process // inferred from mutant phenotype","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from mutant phenotype /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0016235 // aggresome // inferred from direct assay /// 0043005 // neuron projection // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation /// 0019900 // kinase binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from physical interaction /// 0030165 // PDZ domain binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051087 // chaperone binding // inferred from physical interaction","chr6:161768455-163148834 (-) // 91.17 // q26"]
["11750503_a_at",-0.0068483353,-0.017999649,0.05922985,0.0068483353,0.11670303,-0.10145521,0.9863795,0.954486,1.0028427,0.00409528,1.0028427,"up","TM9SF4",9777.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr20:30697530-30734652 (+) // 92.01 // q11.21"]
["11762178_at",0.025657177,-0.024393559,0.10156536,0.024393559,-0.071492195,-0.047878265,0.61587447,0.23010382,1.0467633,0.06593525,1.0467633,"up","CD3G",917.0,"0006461 // protein complex assembly // non-traceable author statement /// 0007163 // establishment or maintenance of cell polarity // inferred from mutant phenotype /// 0007166 // cell surface receptor signaling pathway // inferred from mutant phenotype /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0015031 // protein transport // inferred from mutant phenotype /// 0031295 // T cell costimulation // traceable author statement /// 0042110 // T cell activation // non-traceable author statement /// 0042981 // regulation of apoptotic process // inferred from mutant phenotype /// 0050776 // regulation of immune response // traceable author statement /// 0050852 // T cell receptor signaling pathway // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0042101 // T cell receptor complex // non-traceable author statement /// 0042105 // alpha-beta T cell receptor complex // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from mutant phenotype /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0030159 // receptor signaling complex scaffold activity // non-traceable author statement /// 0042608 // T cell receptor binding // non-traceable author statement /// 0046982 // protein heterodimerization activity // inferred from physical interaction","chr11:118215074-118223864 (+) // 80.85 // q23.3"]
["11730544_a_at",0.048729897,-0.16711617,0.040623188,0.010249138,-0.013605118,-0.010249138,0.9254924,0.77834874,-1.0149341,-0.021386003,1.0149341,"down","ATPAF1-AS1",374973.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr1:47137499-47139254 (+) // 96.61 // p33"]
["11715531_at",0.10413742,0.075553894,0.068201065,-0.068201065,-0.10025501,-0.08449459,0.06661608,3.1153587E-4,1.1226807,0.16694762,1.1226807,"up","PRPF8",10594.0,"0000375 // RNA splicing, via transesterification reactions // traceable author statement /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred from electronic annotation /// 0006397 // mRNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005682 // U5 snRNP // traceable author statement /// 0016607 // nuclear speck // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay","0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr17:1553922-1588115 (-) // 61.34 // p13.3"]
["11759070_s_at",-0.060387135,0.051198483,0.10182524,-0.02783966,-0.12495947,0.02783966,0.6932752,0.33019668,1.0515606,0.07253205,1.0515606,"up","ZNF551",90233.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:58193346-58201745 (+) // 81.53 // q13.43"]
["11730514_at",0.09616661,0.0304389,-0.20055747,0.17417979,-0.22749901,-0.0304389,0.9947786,0.983299,1.0022683,0.00326878,1.0022683,"up","C16orf78",123970.0,"","","","chr16:49407718-49433341 (+) // 97.37 // q12.1"]
["11716963_a_at",-0.0611763,0.035979748,-0.012966156,0.012966156,-0.19961452,0.019957066,0.8516524,0.60902756,1.0301417,0.042842813,1.0301417,"up","PPM1F",9647.0,"0006469 // negative regulation of protein kinase activity // inferred from direct assay /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from mutant phenotype /// 0010634 // positive regulation of epithelial cell migration // inferred from mutant phenotype /// 0010811 // positive regulation of cell-substrate adhesion // inferred from mutant phenotype /// 0016310 // phosphorylation // inferred from electronic annotation /// 0033137 // negative regulation of peptidyl-serine phosphorylation // inferred from direct assay /// 0035690 // cellular response to drug // inferred from direct assay /// 0035970 // peptidyl-threonine dephosphorylation // inferred from direct assay /// 0043280 // positive regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0044387 // negative regulation of protein kinase activity by regulation of protein phosphorylation // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045927 // positive regulation of growth // inferred from mutant phenotype /// 0050921 // positive regulation of chemotaxis // inferred from mutant phenotype /// 0051496 // positive regulation of stress fiber assembly // inferred from direct assay /// 0051496 // positive regulation of stress fiber assembly // inferred from mutant phenotype /// 0051894 // positive regulation of focal adhesion assembly // inferred from mutant phenotype /// 0097193 // intrinsic apoptotic signaling pathway // inferred from direct assay","0005829 // cytosol // inferred from direct assay /// 0008287 // protein serine/threonine phosphatase complex // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay","0003824 // catalytic activity // inferred from electronic annotation /// 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004722 // protein serine/threonine phosphatase activity // inferred from direct assay /// 0004722 // protein serine/threonine phosphatase activity // inferred from mutant phenotype /// 0004722 // protein serine/threonine phosphatase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016301 // kinase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from direct assay /// 0033192 // calmodulin-dependent protein phosphatase activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr22:22273805-22307250 (-) // 98.2 // q11.22"]
["11759463_at",0.065052986,-0.14346552,0.083948135,-0.074599266,-0.065052986,0.25565386,0.9301436,0.79215205,-1.0258516,-0.036822055,1.0258516,"down","ADAMTS20",80070.0,"0006508 // proteolysis // inferred from electronic annotation /// 0009967 // positive regulation of signal transduction // inferred from electronic annotation /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0045636 // positive regulation of melanocyte differentiation // inferred from electronic annotation /// 0048070 // regulation of developmental pigmentation // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0031012 // extracellular matrix // traceable author statement /// 0031012 // extracellular matrix // inferred from electronic annotation","0004175 // endopeptidase activity // inferred from electronic annotation /// 0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:43747668-43945724 (-) // 99.62 // q12"]
["11764274_s_at",-0.06984067,0.06984067,-0.3134024,0.122638226,-0.20930958,0.13777494,0.7921981,0.4880459,-1.0878669,-0.12150206,1.0878669,"down",0.122638226,-0.20930958,0.13777494,-0.06984067,0.06984067,-0.3134024]
["11730650_at",-0.011823893,0.10782719,-0.030214787,0.059265375,0.011823893,-0.16201329,0.8239694,0.54931295,1.0368718,0.052237514,1.0368718,"up","ANO3",63982.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006821 // chloride transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0034707 // chloride channel complex // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005254 // chloride channel activity // inferred from electronic annotation","chr11:26352970-26684836 (+) // 96.81 // p14.2"]
["11720340_a_at",-0.005856037,-0.072194576,-0.045066357,0.005856037,0.09081268,0.03855467,0.3647739,0.051546145,-1.0615066,-0.08611338,1.0615066,"down","STX1A",6804.0,"0001956 // positive regulation of neurotransmitter secretion // inferred from electronic annotation /// 0006112 // energy reserve metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006836 // neurotransmitter transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006887 // exocytosis // inferred from electronic annotation /// 0007268 // synaptic transmission // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007269 // neurotransmitter secretion // traceable author statement /// 0009629 // response to gravity // inferred from electronic annotation /// 0014047 // glutamate secretion // traceable author statement /// 0016081 // synaptic vesicle docking involved in exocytosis // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0017156 // calcium ion-dependent exocytosis // inferred from electronic annotation /// 0017157 // regulation of exocytosis // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0045921 // positive regulation of exocytosis // inferred from electronic annotation /// 0050796 // regulation of insulin secretion // traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030141 // secretory granule // inferred from electronic annotation /// 0030672 // synaptic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0042641 // actomyosin // inferred from electronic annotation /// 0043005 // neuron projection // inferred from direct assay /// 0043005 // neuron projection // inferred from electronic annotation /// 0043229 // intracellular organelle // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0070032 // synaptobrevin 2-SNAP-25-syntaxin-1a-complexin I complex // inferred from electronic annotation /// 0070044 // synaptobrevin 2-SNAP-25-syntaxin-1a complex // inferred from electronic annotation","0000149 // SNARE binding // inferred from electronic annotation /// 0001948 // glycoprotein binding // inferred from electronic annotation /// 0005484 // SNAP receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0017022 // myosin binding // inferred from electronic annotation /// 0019855 // calcium channel inhibitor activity // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0030674 // protein binding, bridging // inferred from electronic annotation /// 0032028 // myosin head/neck binding // inferred from electronic annotation /// 0043008 // ATP-dependent protein binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from electronic annotation /// 0048306 // calcium-dependent protein binding // inferred from electronic annotation","chr7:73113536-73133999 (-) // 94.63 // q11.23"]
["11729927_a_at",0.08785534,-0.113432646,0.033597946,-0.22788763,0.022077084,-0.022077084,0.7802158,0.4660751,1.0560192,0.07863604,1.0560192,"up","ZNF510",22869.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:99517931-99540369 (-) // 64.66 // q22.33"]
["11747575_a_at",-9.965897E-4,9.965897E-4,0.13249493,-0.025389671,0.006974697,-0.019443512,0.65293807,0.27805552,1.0401449,0.056784548,1.0401449,"up","SORBS3",10174.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006936 // muscle contraction // traceable author statement /// 0007155 // cell adhesion // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0031589 // cell-substrate adhesion // inferred from electronic annotation /// 0043410 // positive regulation of MAPK cascade // inferred from electronic annotation /// 0051495 // positive regulation of cytoskeleton organization // non-traceable author statement /// 0051496 // positive regulation of stress fiber assembly // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0005925 // focal adhesion // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","0005200 // structural constituent of cytoskeleton // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0017166 // vinculin binding // inferred from physical interaction","chr8:22409460-22432561 (+) // 96.16 // p21.3"]
["11741425_a_at",0.04661727,-0.08452058,0.029028654,-0.26204705,-0.029028654,0.09563136,0.85206413,0.61011004,1.0440494,0.06218995,1.0440494,"up","MRO",83876.0,"","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation","","chr18:48321490-48351754 (-) // 74.17 // q21.2"]
["11753550_a_at",-0.05232978,0.010407686,0.053375483,0.21237898,-0.010407686,-0.050523043,0.85710466,0.6214638,-1.0328745,-0.04666492,1.0328745,"down","LINC00189",193629.0,"","","","chr21:30565800-30660526 (+) // 60.69 // q21.3"]
["11728104_at",0.028328896,0.048595905,-0.14933515,0.12847519,-0.07247925,-0.028328896,0.9015335,0.7226504,-1.0233922,-0.033359144,1.0233922,"down","HTR2B",3357.0,"0001755 // neural crest cell migration // inferred from sequence or structural similarity /// 0001755 // neural crest cell migration // inferred from electronic annotation /// 0001819 // positive regulation of cytokine production // inferred from direct assay /// 0001938 // positive regulation of endothelial cell proliferation // inferred from mutant phenotype /// 0001938 // positive regulation of endothelial cell proliferation // inferred from electronic annotation /// 0002031 // G-protein coupled receptor internalization // inferred from mutant phenotype /// 0002031 // G-protein coupled receptor internalization // inferred from electronic annotation /// 0003007 // heart morphogenesis // inferred from sequence or structural similarity /// 0003007 // heart morphogenesis // inferred from electronic annotation /// 0003300 // cardiac muscle hypertrophy // inferred from sequence or structural similarity /// 0003300 // cardiac muscle hypertrophy // inferred from electronic annotation /// 0006182 // cGMP biosynthetic process // inferred from direct assay /// 0006661 // phosphatidylinositol biosynthetic process // inferred from mutant phenotype /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from mutant phenotype /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007205 // protein kinase C-activating G-protein coupled receptor signaling pathway // inferred from sequence or structural similarity /// 0007205 // protein kinase C-activating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007210 // serotonin receptor signaling pathway // inferred from direct assay /// 0007210 // serotonin receptor signaling pathway // inferred from mutant phenotype /// 0007210 // serotonin receptor signaling pathway // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0010507 // negative regulation of autophagy // inferred from mutant phenotype /// 0014033 // neural crest cell differentiation // inferred from sequence or structural similarity /// 0014033 // neural crest cell differentiation // inferred from electronic annotation /// 0014065 // phosphatidylinositol 3-kinase cascade // inferred from mutant phenotype /// 0014827 // intestine smooth muscle contraction // inferred from mutant phenotype /// 0016310 // phosphorylation // inferred from mutant phenotype /// 0019722 // calcium-mediated signaling // inferred from mutant phenotype /// 0032320 // positive regulation of Ras GTPase activity // inferred from sequence or structural similarity /// 0032320 // positive regulation of Ras GTPase activity // inferred from electronic annotation /// 0042310 // vasoconstriction // inferred from mutant phenotype /// 0042493 // response to drug // inferred from direct assay /// 0042493 // response to drug // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from sequence or structural similarity /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from expression pattern /// 0043406 // positive regulation of MAP kinase activity // inferred from direct assay /// 0048598 // embryonic morphogenesis // inferred from sequence or structural similarity /// 0048598 // embryonic morphogenesis // inferred from electronic annotation /// 0050715 // positive regulation of cytokine secretion // inferred from sequence or structural similarity /// 0050715 // positive regulation of cytokine secretion // inferred from electronic annotation /// 0050795 // regulation of behavior // inferred from mutant phenotype /// 0050795 // regulation of behavior // inferred from electronic annotation /// 0051000 // positive regulation of nitric-oxide synthase activity // inferred from direct assay /// 0051209 // release of sequestered calcium ion into cytosol // inferred from direct assay /// 0051209 // release of sequestered calcium ion into cytosol // inferred from mutant phenotype /// 0051781 // positive regulation of cell division // inferred from sequence or structural similarity /// 0051781 // positive regulation of cell division // inferred from electronic annotation /// 0060548 // negative regulation of cell death // inferred from mutant phenotype /// 0070371 // ERK1 and ERK2 cascade // inferred from mutant phenotype /// 0070371 // ERK1 and ERK2 cascade // inferred from electronic annotation /// 0070528 // protein kinase C signaling cascade // inferred from mutant phenotype /// 0070588 // calcium ion transmembrane transport // inferred from mutant phenotype /// 0071277 // cellular response to calcium ion // inferred from mutant phenotype /// 0071502 // cellular response to temperature stimulus // inferred from sequence or structural similarity /// 0071502 // cellular response to temperature stimulus // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0001965 // G-protein alpha-subunit binding // inferred from mutant phenotype /// 0004435 // phosphatidylinositol phospholipase C activity // inferred from direct assay /// 0004435 // phosphatidylinositol phospholipase C activity // inferred from mutant phenotype /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004993 // serotonin receptor activity // inferred from direct assay /// 0004993 // serotonin receptor activity // inferred from electronic annotation /// 0005099 // Ras GTPase activator activity // inferred from sequence or structural similarity /// 0005099 // Ras GTPase activator activity // inferred from electronic annotation /// 0005262 // calcium channel activity // inferred from mutant phenotype /// 0008144 // drug binding // inferred from direct assay /// 0008144 // drug binding // inferred from electronic annotation /// 0051378 // serotonin binding // inferred from direct assay /// 0051378 // serotonin binding // inferred from electronic annotation","chr2:231972943-231989824 (-) // 98.85 // q37.1"]
["11756178_s_at",-0.04903221,-0.030005455,0.041635513,-0.0023126602,0.0023126602,0.07099247,0.72421414,0.3768787,-1.0253607,-0.036131512,1.0253607,"down","CMTM6",54918.0,"0006935 // chemotaxis // inferred from electronic annotation","0005615 // extracellular space // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005125 // cytokine activity // inferred from electronic annotation","chr3:32522803-32525037 (-) // 95.66 // p22.3"]
["AFFX-BkGr-GC10_at",-0.0042119026,-0.0027945042,2.3770332E-4,0.023891449,-2.3770332E-4,0.02655816,0.44559166,0.09237307,-1.0132524,-0.01899356,1.0132524,"down",0.023891449,-2.3770332E-4,0.02655816,-0.0042119026,-0.0027945042,2.3770332E-4]
["11723535_at",0.085547924,-0.15912938,0.31696224,-0.08554816,0.2959752,-0.14106798,0.9261958,0.7801833,1.0410268,0.05800725,1.0410268,"up","PDGFRL",5157.0,"0035791 // platelet-derived growth factor receptor-beta signaling pathway // traceable author statement","0005576 // extracellular region // inferred from electronic annotation","0004992 // platelet activating factor receptor activity // traceable author statement /// 0005019 // platelet-derived growth factor beta-receptor activity // traceable author statement","chr8:17433941-17500641 (+) // 90.83 // p22"]
["11715376_a_at",-0.0050992966,-0.018909454,0.04321003,0.0050992966,-0.023368835,0.016080856,0.91958565,0.76415604,1.0049543,0.0071299514,1.0049543,"up","RPS11",6205.0,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // inferred by curator /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral infectious cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // non-traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0019843 // rRNA binding // inferred from electronic annotation","chr19:49999691-50002946 (+) // 73.05 // q13.33"]
["11717698_a_at",0.022294521,-0.036518097,0.011859894,-0.011859894,-0.12533712,0.06263447,0.8900785,0.69741285,1.0168214,0.024066277,1.0168214,"up","ARIH1",25820.0,"0006511 // ubiquitin-dependent protein catabolic process // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement","0000151 // ubiquitin ligase complex // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0019787 // small conjugating protein ligase activity // traceable author statement /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr15:72766666-72879692 (+) // 95.31 // q24.1"]
["11734518_at",-0.03496051,0.08928251,-0.094058275,-0.013010263,0.0753057,0.013010263,0.82814646,0.557798,-1.0269368,-0.038347356,1.0269368,"down","PAGE2",203569.0,"","","","chrX:55115440-55119269 (+) // 97.5 // p11.21"]
["11724473_a_at",-0.07489705,0.002221346,-0.002221346,0.12509418,0.1375053,-0.032976866,0.5513324,0.16760269,-1.0728933,-0.10150655,1.0728933,"down","AMPH",273.0,"0006897 // endocytosis // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007612 // learning // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0045807 // positive regulation of endocytosis // inferred from electronic annotation /// 0048488 // synaptic vesicle endocytosis // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0008021 // synaptic vesicle // traceable author statement /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030672 // synaptic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043679 // axon terminus // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr7:38423301-38671167 (-) // 94.17 // p14.1"]
["11718880_at",0.013578415,0.027776718,0.036821365,-0.115112305,-0.013578415,-0.06227112,0.33532813,0.04067401,1.0641583,0.089712806,1.0641583,"up","ZCCHC14",23174.0,"0007154 // cell communication // inferred from electronic annotation","","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:87439588-87525825 (-) // 96.28 // q24.2"]
["11722586_a_at",0.033791542,0.01346302,0.16948223,-0.055309296,-0.06277847,-0.01346302,0.43560016,0.086467445,1.0837979,0.116095796,1.0837979,"up","G3BP1",10146.0,"0006810 // transport // inferred from electronic annotation /// 0007265 // Ras protein signal transduction // traceable author statement /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0004003 // ATP-dependent DNA helicase activity // traceable author statement /// 0004004 // ATP-dependent RNA helicase activity // traceable author statement /// 0004386 // helicase activity // inferred from electronic annotation /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004519 // endonuclease activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr5:151151470-151184915 (+) // 98.25 // q33.1"]
["11738032_x_at",0.04929018,-0.04929018,-0.22599554,-0.115983486,0.075199604,0.084365845,0.76110166,0.4350121,-1.0642663,-0.08985922,1.0642663,"down","FAM153C",653316.0,"","","","chr5:177435688-177474656 (+) // 88.58 // q35.3 /// chr5:175490073-175541588 (+) // 89.57 // q35.2 /// chr5:177150577-177208143 (-) // 97.25 // q35.3"]
["11732169_a_at",-0.038785458,1.2874603E-5,0.043633938,-0.04972315,-1.2874603E-5,0.11092901,0.9096691,0.741563,-1.0131004,-0.018777134,1.0131004,"down","PTPN7",5778.0,"0006470 // protein dephosphorylation // traceable author statement /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // traceable author statement /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0009898 // internal side of plasma membrane // inferred from direct assay","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation","chr1:202116143-202130727 (-) // 96.67 // q32.1"]
["11716971_a_at",0.27499485,-0.019920826,-0.11023188,-0.08947849,0.019920826,0.045785904,0.880413,0.67260385,1.0397269,0.05620457,1.0397269,"up","MRAS",22808.0,"0006184 // GTP catabolic process // traceable author statement /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007265 // Ras protein signal transduction // traceable author statement /// 0007275 // multicellular organismal development // traceable author statement /// 0007517 // muscle organ development // traceable author statement /// 0030036 // actin cytoskeleton organization // traceable author statement","0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0005525 // GTP binding // inferred from electronic annotation /// 0030742 // GTP-dependent protein binding // inferred from physical interaction","chr3:138066453-138124375 (+) // 89.3 // q22.3"]
["11719276_at",0.11883354,-0.122573376,0.024463654,-0.07810831,7.915497E-5,-7.9631805E-5,0.8846072,0.6828074,1.0230979,0.032944165,1.0230979,"up","MRPL17",63875.0,"0006412 // translation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005840 // ribosome // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from physical interaction","chr11:6701574-6704846 (-) // 98.52 // p15.4"]
["11745852_a_at",-0.00521183,0.03892708,0.08054733,0.00521183,-0.080924034,-0.07950878,0.4179691,0.07596149,1.0642432,0.089827865,1.0642432,"up","NUBP2",10101.0,"","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation","0000166 // nucleotide binding // traceable author statement /// 0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation /// 0051539 // 4 iron, 4 sulfur cluster binding // inferred from electronic annotation","chr16:1832932-1839182 (+) // 98.16 // p13.3"]
["11749827_a_at",0.08962774,0.01457119,0.37360096,-0.09582043,-0.01457119,-0.15313292,0.4601545,0.10119766,1.1868258,0.24710813,1.1868258,"up","CYBB",1536.0,"0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006801 // superoxide metabolic process // inferred from direct assay /// 0006801 // superoxide metabolic process // traceable author statement /// 0006811 // ion transport // inferred from electronic annotation /// 0006954 // inflammatory response // traceable author statement /// 0022900 // electron transport chain // inferred from electronic annotation /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0042554 // superoxide anion generation // inferred from direct assay /// 0042554 // superoxide anion generation // traceable author statement /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0045087 // innate immune response // inferred from mutant phenotype /// 0045087 // innate immune response // traceable author statement /// 0045730 // respiratory burst // inferred from mutant phenotype /// 0045730 // respiratory burst // traceable author statement /// 0050665 // hydrogen peroxide biosynthetic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from direct assay /// 0055114 // oxidation-reduction process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030670 // phagocytic vesicle membrane // traceable author statement /// 0043020 // NADPH oxidase complex // inferred from direct assay /// 0043020 // NADPH oxidase complex // traceable author statement","0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0009055 // electron carrier activity // inferred from direct assay /// 0016175 // superoxide-generating NADPH oxidase activity // inferred from direct assay /// 0016175 // superoxide-generating NADPH oxidase activity // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0020037 // heme binding // inferred from mutant phenotype /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from physical interaction /// 0050660 // flavin adenine dinucleotide binding // inferred from mutant phenotype","chrX:37639316-37670388 (+) // 90.99 // p11.4"]
["11756300_a_at",-0.018662453,-0.029542923,-0.005666733,0.005666733,0.020652771,0.045049667,0.31869236,0.035617743,-1.0293596,-0.041747037,1.0293596,"down","ANP32B",10541.0,"","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","","chr9:100745637-100778205 (+) // 81.4 // q22.33"]
["11745142_a_at",0.06858015,-0.08939409,0.20435381,-0.06858015,-0.3233447,0.09997368,0.70676965,0.34877485,1.1161238,0.15849705,1.1161238,"up","CEP89",84902.0,"","0000922 // spindle pole // inferred from direct assay /// 0000922 // spindle pole // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation","","chr19:33422130-33462869 (-) // 98.36 // q13.11"]
["11729038_a_at",0.045590878,0.042892694,-0.09613013,-0.22124529,-0.042892456,0.060491085,0.8130416,0.52803695,1.0463266,0.06533329,1.0463266,"up","DCDC2",51473.0,"0001764 // neuron migration // inferred from sequence or structural similarity /// 0001764 // neuron migration // non-traceable author statement /// 0001764 // neuron migration // inferred from electronic annotation /// 0006968 // cellular defense response // traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","","chr6:24169842-24358280 (-) // 90.53 // p22.3"]
["11743607_a_at",0.03515911,-0.0534935,0.061781883,0.016289711,-0.04885006,-0.016289711,0.78856313,0.4805515,1.0215542,0.030765794,1.0215542,"up","COG2",22796.0,"0006486 // protein glycosylation // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // traceable author statement /// 0006891 // intra-Golgi vesicle-mediated transport // inferred from mutant phenotype /// 0007030 // Golgi organization // inferred from mutant phenotype /// 0007030 // Golgi organization // inferred from electronic annotation /// 0009312 // oligosaccharide biosynthetic process // traceable author statement /// 0015031 // protein transport // inferred from mutant phenotype /// 0015031 // protein transport // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0000139 // Golgi membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005795 // Golgi stack // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0017119 // Golgi transport complex // inferred from direct assay /// 0017119 // Golgi transport complex // inferred from mutant phenotype","0005515 // protein binding // inferred from physical interaction /// 0008565 // protein transporter activity // inferred from mutant phenotype","chr1:230778201-230829731 (+) // 98.44 // q42.2"]
["11716392_s_at",-0.035058975,-0.036557198,-0.028903961,0.059152603,0.112914085,0.028903961,0.23349088,0.015192944,-1.0721427,-0.10049696,1.0721427,"down","ADH5",128.0,"0001523 // retinoid metabolic process // inferred from electronic annotation /// 0003016 // respiratory system process // inferred from electronic annotation /// 0006068 // ethanol catabolic process // inferred from electronic annotation /// 0006069 // ethanol oxidation // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0018119 // peptidyl-cysteine S-nitrosylation // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0045777 // positive regulation of blood pressure // inferred from electronic annotation /// 0046294 // formaldehyde catabolic process // inferred from electronic annotation /// 0051409 // response to nitrosative stress // inferred from electronic annotation /// 0051775 // response to redox state // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004022 // alcohol dehydrogenase (NAD) activity // inferred from electronic annotation /// 0005504 // fatty acid binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0009055 // electron carrier activity // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0018467 // formaldehyde dehydrogenase activity // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051903 // S-(hydroxymethyl)glutathione dehydrogenase activity // traceable author statement /// 0051903 // S-(hydroxymethyl)glutathione dehydrogenase activity // inferred from electronic annotation","chr4:99992379-100009939 (-) // 63.94 // q23"]
["11717405_a_at",-0.0131959915,0.05951357,0.01015377,-0.010153294,-0.031369686,0.026847363,0.76109195,0.43499112,1.0165743,0.023715612,1.0165743,"up","FAM120AOS",158293.0,"","","","chr9:96208554-96215874 (-) // 86.74 // q22.31"]
["11760439_x_at",-0.06036997,-0.22664213,0.06036997,0.085460186,0.09595728,-0.0929513,0.7179778,0.36691558,-1.0755213,-0.10503616,1.0755213,"down","DSTNP2",171220.0,"","","","chr12:6993768-6995426 (+) // 52.77 // p13.31"]
["11734506_a_at",-0.0765748,-0.0022082329,0.080760956,0.10420418,-0.12436247,0.002207756,0.9815451,0.93798304,1.0046151,0.0066428194,1.0046151,"up","MECOM",2122.0,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0001780 // neutrophil homeostasis // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0009605 // response to external stimulus // inferred from electronic annotation /// 0009617 // response to bacterium // inferred from electronic annotation /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0030097 // hemopoiesis // inferred from direct assay /// 0030097 // hemopoiesis // traceable author statement /// 0030099 // myeloid cell differentiation // inferred from direct assay /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // inferred from direct assay /// 0030853 // negative regulation of granulocyte differentiation // inferred from mutant phenotype /// 0030854 // positive regulation of granulocyte differentiation // inferred from mutant phenotype /// 0030900 // forebrain development // inferred from electronic annotation /// 0035115 // embryonic forelimb morphogenesis // inferred from electronic annotation /// 0035116 // embryonic hindlimb morphogenesis // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0043069 // negative regulation of programmed cell death // inferred from mutant phenotype /// 0045766 // positive regulation of angiogenesis // inferred from sequence or structural similarity /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0046329 // negative regulation of JNK cascade // inferred from mutant phenotype /// 0048935 // peripheral nervous system neuron development // traceable author statement /// 0051726 // regulation of cell cycle // inferred from direct assay /// 0060039 // pericardium development // inferred from electronic annotation /// 0071425 // hemopoietic stem cell proliferation // inferred from electronic annotation /// 0071425 // hemopoietic stem cell proliferation // inferred from sequence or structural similarity /// 0071425 // hemopoietic stem cell proliferation // traceable author statement","0000118 // histone deacetylase complex // inferred from direct assay /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0016607 // nuclear speck // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0000975 // regulatory region DNA binding // inferred from direct assay /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from sequence or structural similarity /// 0003677 // DNA binding // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005509 // calcium ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005524 // ATP binding // non-traceable author statement /// 0008134 // transcription factor binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from direct assay","chr3:168801286-168864076 (-) // 98.63 // q26.2"]
["11718178_a_at",0.14658499,-0.011881828,-0.0050754547,0.0050759315,0.03262043,-0.10838127,0.72457266,0.37766966,1.0473697,0.0667708,1.0473697,"up","CMTM4",146223.0,"0006935 // chemotaxis // inferred from electronic annotation","0005615 // extracellular space // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005125 // cytokine activity // inferred from electronic annotation","chr16:66648652-66730894 (-) // 98.1 // q21"]
["11717182_a_at",-0.021306038,-0.026350975,0.033991814,-4.2438507E-4,0.08413696,4.2438507E-4,0.7342273,0.3927138,-1.0228543,-0.032600693,1.0228543,"down","PDS5A",23244.0,"0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0008156 // negative regulation of DNA replication // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation","0000785 // chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr4:39824411-39979576 (-) // 98.33 // p14"]
["11755265_s_at",0.045240402,-0.023984909,0.19602776,-0.00242424,0.00242424,-0.03397751,0.6489675,0.2729224,1.0597718,0.08375361,1.0597718,"up","NT5DC1",221294.0,"","","0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:116430930-116565386 (+) // 88.25 // q22.1"]
["11725697_at",-0.034830093,-0.019836426,0.0023460388,-0.0023460388,0.04603672,0.02888298,0.42495614,0.07958975,-1.0292771,-0.041631415,1.0292771,"down","TRIM56",81844.0,"0009615 // response to virus // inferred from electronic annotation /// 0032608 // interferon-beta production // inferred from sequence or structural similarity /// 0032608 // interferon-beta production // inferred from electronic annotation /// 0034340 // response to type I interferon // inferred from sequence or structural similarity /// 0034340 // response to type I interferon // inferred from electronic annotation /// 0045087 // innate immune response // inferred from electronic annotation /// 0051607 // defense response to virus // inferred from sequence or structural similarity /// 0051607 // defense response to virus // inferred from electronic annotation /// 0070534 // protein K63-linked ubiquitination // inferred from sequence or structural similarity /// 0070534 // protein K63-linked ubiquitination // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation","0004842 // ubiquitin-protein ligase activity // inferred from sequence or structural similarity /// 0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:100728719-100733905 (+) // 89.88 // q22.1"]
["11728149_a_at",-0.093159914,0.24234748,0.044454098,-0.30805588,0.10884547,-0.044454098,0.74152505,0.40270087,1.10632,0.14576878,1.10632,"up","NPM2",10361.0,"0006338 // chromatin remodeling // inferred from direct assay /// 0007096 // regulation of exit from mitosis // inferred from mutant phenotype /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007338 // single fertilization // inferred from mutant phenotype /// 0007338 // single fertilization // inferred from electronic annotation /// 0009790 // embryo development // inferred from mutant phenotype /// 0009994 // oocyte differentiation // inferred from expression pattern /// 0016568 // chromatin modification // inferred from electronic annotation /// 0045836 // positive regulation of meiosis // inferred from mutant phenotype","0000789 // cytoplasmic chromatin // inferred from direct assay /// 0000790 // nuclear chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0042393 // histone binding // traceable author statement","chr8:21882354-21894407 (+) // 91.18 // p21.3"]
["11755829_a_at",0.18694568,-0.17050648,-0.14273834,0.042872667,-0.04287243,0.24685335,0.7609513,0.434659,-1.0900424,-0.12438419,1.0900424,"down","ATP13A4",84239.0,"0006200 // ATP catabolic process // inferred from electronic annotation /// 0006754 // ATP biosynthetic process // inferred from electronic annotation /// 0006812 // cation transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0015662 // ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016820 // hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:193119866-193185137 (-) // 98.33 // q29"]
["11744492_x_at",-0.0037765503,-0.06252384,0.09699154,-0.016841888,0.1089859,0.0037765503,0.9086506,0.7383986,-1.0151854,-0.021743163,1.0151854,"down","SRSF5",6430.0,"0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006376 // mRNA splice site selection // traceable author statement /// 0006397 // mRNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0009611 // response to wounding // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0031124 // mRNA 3'-end processing // traceable author statement /// 0051726 // regulation of cell cycle // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0016607 // nuclear speck // inferred from sequence or structural similarity","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0050733 // RS domain binding // inferred from electronic annotation","chr14:70233898-70238721 (+) // 96.54 // q24.2"]
["11762834_at",0.030725956,-0.027233362,0.027233839,-0.033874035,0.0,0.0,0.72676164,0.3811481,1.0150378,0.021533418,1.0150378,"up","NKAIN2",154215.0,"","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr6:124125181-124980104 (+) // 99.83 // q22.31"]
["11737263_at",-0.042366028,-0.1291933,0.104090214,0.042366028,-0.10902119,0.10526848,0.9018523,0.7235441,-1.024813,-0.03536076,1.024813,"down","HRK",8739.0,"0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // traceable author statement /// 0008634 // negative regulation of survival gene product expression // traceable author statement /// 0032464 // positive regulation of protein homooligomerization // inferred from direct assay /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0043525 // positive regulation of neuron apoptotic process // inferred from electronic annotation /// 0051365 // cellular response to potassium ion starvation // inferred from electronic annotation /// 0090200 // positive regulation of release of cytochrome c from mitochondria // inferred from direct assay","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr12:117298224-117319232 (-) // 86.26 // q24.22"]
["11722320_a_at",-0.04824233,0.14881086,-0.1426835,0.01745677,0.08438015,-0.017457008,0.8780272,0.6669238,-1.0296578,-0.042165004,1.0296578,"down","EFNB3",1949.0,"0007267 // cell-cell signaling // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0007411 // axon guidance // inferred from electronic annotation /// 0007628 // adult walking behavior // inferred from electronic annotation /// 0016198 // axon choice point recognition // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0048013 // ephrin receptor signaling pathway // inferred from direct assay","0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005005 // transmembrane-ephrin receptor activity // traceable author statement /// 0046875 // ephrin receptor binding // inferred from direct assay","chr17:7608389-7614696 (+) // 98.93 // p13.1"]
["11749968_a_at",0.026028633,0.15095282,0.16116667,-0.060975075,-0.041431904,-0.026028633,0.2805643,0.025196543,1.1138291,0.15552793,1.1138291,"up","RAD52",5893.0,"0000724 // double-strand break repair via homologous recombination // traceable author statement /// 0000724 // double-strand break repair via homologous recombination // inferred from electronic annotation /// 0000730 // DNA recombinase assembly // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006281 // DNA repair // traceable author statement /// 0006302 // double-strand break repair // traceable author statement /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006312 // mitotic recombination // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007131 // reciprocal meiotic recombination // traceable author statement","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0003677 // DNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr12:1025371-1058860 (-) // 88.39 // p13.33"]
["11739554_a_at",0.03732586,-0.08496666,-0.37810326,0.0,0.17191744,0.0,0.6038906,0.21662319,-1.1480778,-0.19922046,1.1480778,"down","GAS7",8522.0,"0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0007050 // cell cycle arrest // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0030041 // actin filament polymerization // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0048812 // neuron projection morphogenesis // inferred from electronic annotation /// 0051017 // actin filament bundle assembly // inferred from electronic annotation","0001726 // ruffle // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005884 // actin filament // inferred from electronic annotation","0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0051015 // actin filament binding // inferred from electronic annotation","chr17:9813925-9940128 (-) // 90.07 // p13.1"]
["11757005_a_at",-0.0886569,-0.081190586,-0.0934701,0.12459612,0.08119011,0.1330638,0.0634374,2.595326E-4,-1.1492738,-0.20072249,1.1492738,"down","FUCA1",2517.0,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006004 // fucose metabolic process // inferred from electronic annotation /// 0006027 // glycosaminoglycan catabolic process // non-traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation","0005625 // soluble fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred by curator /// 0005737 // cytoplasm // traceable author statement /// 0005764 // lysosome // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004560 // alpha-L-fucosidase activity // traceable author statement /// 0004560 // alpha-L-fucosidase activity // inferred from electronic annotation /// 0015928 // fucosidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity, acting on glycosyl bonds // inferred from electronic annotation /// 0043169 // cation binding // inferred from electronic annotation","chr1:24175298-24194780 (-) // 100.0 // p36.11"]
["11749962_a_at",0.0015590191,0.04903555,0.009531498,-0.1473751,-0.0015590191,-0.22837734,0.4559643,0.098491035,1.1063535,0.14581245,1.1063535,"up","BCAS1",8537.0,"","0005737 // cytoplasm // inferred from electronic annotation","","chr20:52644410-52645983 (-) // 94.96 // q13.2"]
["11756481_x_at",0.032696247,-0.0420928,-0.07794523,-0.032696247,0.07120848,0.10972881,0.6039056,0.21666531,-1.0559398,-0.07852758,1.0559398,"down","FDXR",2232.0,"0006091 // generation of precursor metabolites and energy // traceable author statement /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006694 // steroid biosynthetic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0008202 // steroid metabolic process // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // inferred from electronic annotation /// 0022900 // electron transport chain // inferred from electronic annotation /// 0055114 // oxidation-reduction process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0070995 // NADPH oxidation // inferred from electronic annotation","0005739 // mitochondrion // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005759 // mitochondrial matrix // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004324 // ferredoxin-NADP+ reductase activity // inferred from electronic annotation /// 0004324 // ferredoxin-NADP+ reductase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0015039 // NADPH-adrenodoxin reductase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0070402 // NADPH binding // inferred from electronic annotation","chr17:72858622-72869138 (-) // 97.25 // q25.1"]
["11735765_a_at",0.00521183,0.06544256,0.092858315,-0.0052113533,-0.1336608,-0.103768826,0.34390947,0.044016514,1.0983856,0.13538457,1.0983856,"up","RAB30",27314.0,"0006184 // GTP catabolic process // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0005795 // Golgi stack // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0005525 // GTP binding // inferred from electronic annotation","chr11:82692477-82782908 (-) // 97.59 // q14.1"]
["11724225_a_at",0.024594307,-0.019295692,0.04015827,-0.09078503,0.019295692,-0.10675049,0.54507744,0.1611915,1.0530438,0.0745655,1.0530438,"up","GGCT",79017.0,"0001836 // release of cytochrome c from mitochondria // inferred from mutant phenotype /// 0006750 // glutathione biosynthetic process // traceable author statement /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement","0003839 // gamma-glutamylcyclotransferase activity // inferred from direct assay /// 0003839 // gamma-glutamylcyclotransferase activity // traceable author statement /// 0003839 // gamma-glutamylcyclotransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay","chr7:30536238-30544474 (-) // 96.34 // p14.3"]
["11759893_at",-0.021329403,0.09607029,-0.23253536,0.07620573,0.021329403,-0.1499095,0.92625755,0.7803478,-1.0246563,-0.035140064,1.0246563,"down","PLEKHA8 /// PLEKHA8P1","51054 /// 84725","0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0046836 // glycolipid transport // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0005543 // phospholipid binding // inferred from electronic annotation /// 0017089 // glycolipid transporter activity // inferred from electronic annotation /// 0051861 // glycolipid binding // inferred from electronic annotation","chr7:30068028-30124336 (+) // 93.16 // p14.3"]
["11731636_a_at",-0.028891087,0.028891087,0.04462242,0.044517994,-0.13499546,-0.035846233,0.72052205,0.3704182,1.0402874,0.056982122,1.0402874,"up","GAB1",2549.0,"0000187 // activation of MAPK activity // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // inferred from electronic annotation /// 0007257 // activation of JUN kinase activity // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0008544 // epidermis development // inferred from electronic annotation /// 0030334 // regulation of cell migration // inferred from electronic annotation /// 0043410 // positive regulation of MAPK cascade // inferred from electronic annotation /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from electronic annotation /// 0060711 // labyrinthine layer development // inferred from electronic annotation /// 0070102 // interleukin-6-mediated signaling pathway // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0004871 // signal transducer activity // inferred from electronic annotation /// 0005070 // SH3/SH2 adaptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation","chr4:144257557-144395718 (+) // 96.62 // q31.21"]
["11730834_a_at",0.06848955,-0.029618263,0.107875824,0.0152282715,-0.015227795,-0.018018246,0.6416785,0.2634174,1.0388026,0.054921564,1.0388026,"up","KATNA1",11104.0,"0001764 // neuron migration // inferred from electronic annotation /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0008104 // protein localization // inferred from electronic annotation /// 0010977 // negative regulation of neuron projection development // inferred from electronic annotation /// 0031122 // cytoplasmic microtubule organization // inferred from electronic annotation /// 0051013 // microtubule severing // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 0051329 // interphase of mitotic cell cycle // inferred from mutant phenotype","0000922 // spindle pole // inferred from direct assay /// 0000922 // spindle pole // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005811 // lipid particle // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005813 // centrosome // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030426 // growth cone // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008017 // microtubule binding // inferred from direct assay /// 0008568 // microtubule-severing ATPase activity // inferred from direct assay /// 0008568 // microtubule-severing ATPase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0045502 // dynein binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from physical interaction","chr6:149916008-149969940 (-) // 95.9 // q25.1"]
["11717854_a_at",0.14800882,-0.024610281,-0.26868796,-0.102191925,0.024610281,0.17303538,0.8516501,0.6087193,-1.0571996,-0.08024778,1.0571996,"down","ZSCAN18",65982.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016032 // viral reproduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:58595222-58609730 (-) // 90.75 // q13.43"]
["11730938_x_at",-0.00779438,0.03378868,-0.04729557,0.01565075,-0.050240517,0.00779438,0.9868822,0.95615,1.0012702,0.0018313123,1.0012702,"up","PYCR1",5831.0,"0006561 // proline biosynthetic process // inferred from direct assay /// 0006561 // proline biosynthetic process // inferred from electronic annotation /// 0006561 // proline biosynthetic process // traceable author statement /// 0006950 // response to stress // inferred from electronic annotation /// 0008652 // cellular amino acid biosynthetic process // traceable author statement /// 0008652 // cellular amino acid biosynthetic process // inferred from electronic annotation /// 0034599 // cellular response to oxidative stress // inferred from mutant phenotype /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0055129 // L-proline biosynthetic process // inferred from electronic annotation","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0004735 // pyrroline-5-carboxylate reductase activity // inferred from direct assay /// 0004735 // pyrroline-5-carboxylate reductase activity // traceable author statement /// 0004735 // pyrroline-5-carboxylate reductase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction","chr17:79890266-79895145 (-) // 92.82 // q25.3"]
["11738411_a_at",-0.021081448,-0.035239458,0.021081448,0.032048702,0.024485826,-0.2006967,0.8779839,0.6665982,1.0254859,0.036307618,1.0254859,"up","C1QTNF7",114905.0,"0051260 // protein homooligomerization // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005581 // collagen // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation","","chr4:15341559-15447789 (+) // 92.99 // p15.32"]
["11741146_x_at",-0.07011747,-0.08293486,-0.068449974,0.12466669,0.068449974,0.14258146,0.09774865,0.0012348172,-1.137395,-0.1857334,1.137395,"down","ALDH3B1",221.0,"0006066 // alcohol metabolic process // traceable author statement /// 0006068 // ethanol catabolic process // inferred from electronic annotation /// 0006081 // cellular aldehyde metabolic process // inferred from electronic annotation /// 0006629 // lipid metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0034599 // cellular response to oxidative stress // inferred from direct assay /// 0046185 // aldehyde catabolic process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay","0004028 // 3-chloroallyl aldehyde dehydrogenase activity // traceable author statement /// 0004030 // aldehyde dehydrogenase [NAD(P)+] activity // inferred from direct assay /// 0004030 // aldehyde dehydrogenase [NAD(P)+] activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016620 // oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor // inferred from electronic annotation","chr11:67782764-67796741 (+) // 73.51 // q13.2"]
["11758292_s_at",-0.07525635,0.1176877,0.07925987,0.06660938,-0.091639996,-0.06660938,0.74386305,0.40654847,1.050525,0.07111043,1.050525,"up","PTGIR",5739.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007187 // G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0005085 // guanyl-nucleotide exchange factor activity // traceable author statement","chr19:47124423-47126858 (-) // 89.5 // q13.32"]
["11726550_a_at",-0.23453403,0.005510092,-0.008151531,-0.0055098534,0.022408247,0.010042191,0.6881112,0.3235216,-1.0629241,-0.088038646,1.0629241,"down","CCNB3",85417.0,"0000079 // regulation of cyclin-dependent protein kinase activity // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007126 // meiosis // inferred from electronic annotation /// 0010389 // regulation of G2/M transition of mitotic cell cycle // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from electronic annotation","chrX:49969415-50094913 (+) // 97.6 // p11.22"]
["11720186_s_at",0.07864761,-0.011775017,0.1350975,-0.1167202,0.011775017,-0.08060455,0.43729576,0.08756539,1.0936668,0.12917326,1.0936668,"up","MAD2L1",4085.0,"0000070 // mitotic sister chromatid segregation // inferred from electronic annotation /// 0000075 // cell cycle checkpoint // traceable author statement /// 0000087 // M phase of mitotic cell cycle // traceable author statement /// 0000236 // mitotic prometaphase // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0007093 // mitotic cell cycle checkpoint // inferred from direct assay /// 0007094 // mitotic cell cycle spindle assembly checkpoint // traceable author statement /// 0007094 // mitotic cell cycle spindle assembly checkpoint // inferred from electronic annotation /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0042177 // negative regulation of protein catabolic process // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0060564 // negative regulation of mitotic anaphase-promoting complex activity // inferred from direct assay /// 0090267 // positive regulation of mitotic cell cycle spindle assembly checkpoint // inferred from mutant phenotype /// 0090267 // positive regulation of mitotic cell cycle spindle assembly checkpoint // inferred from electronic annotation","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from direct assay /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0000922 // spindle pole // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005643 // nuclear pore // inferred from direct assay /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction","chr4:120980490-120988229 (-) // 99.37 // q27"]
["11724178_a_at",9.0789795E-4,0.075901985,-0.15040016,-0.016440868,0.005240917,-9.0789795E-4,0.92436993,0.77452004,-1.0143068,-0.02049407,1.0143068,"down","DAAM2",23500.0,"0016043 // cellular component organization // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation","","0003779 // actin binding // inferred from electronic annotation /// 0017048 // Rho GTPase binding // inferred from electronic annotation","chr6:39760793-39872645 (+) // 97.67 // p21.2"]
["11735151_a_at",-0.2027359,0.06307721,-0.14122581,0.001242876,0.22015333,-0.0012431145,0.5856111,0.19960976,-1.1227312,-0.16701257,1.1227312,"down","NXPE3",91775.0,"","0005576 // extracellular region // inferred from electronic annotation","","chr3:101498285-101547507 (+) // 80.86 // q12.3"]
["11732055_s_at",-0.051058054,0.014020205,-0.253268,0.004475832,-0.004475832,0.112841606,0.5916467,0.2050315,-1.0976229,-0.13438244,1.0976229,"down","CC2D2B /// LOC100652732 /// LOC100653119","100652732 /// 100653119 /// 387707","","","","chr10:97759847-97792440 (+) // 86.7 // q24.1"]
["11745619_a_at",0.14851761,-0.16412926,0.0,0.10024428,-0.041273117,0.0,0.93840945,0.8151651,-1.0173817,-0.024861004,1.0173817,"down","ST18",9705.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:53025103-53130382 (-) // 99.46 // q11.23"]
["11735608_s_at",-0.03878832,0.052226067,-0.0960865,-0.04283619,0.03878808,0.057463408,0.764709,0.4406726,-1.0319369,-0.045354735,1.0319369,"down","C12orf56",115749.0,"","","","chr12:64660762-64784345 (-) // 94.18 // q14.2"]
["11729166_a_at",0.016879082,0.14555836,0.038308144,-0.016879082,-0.044905663,-0.019059181,0.42960596,0.0829395,1.0672241,0.09386321,1.0672241,"up","DCTD",1635.0,"0006206 // pyrimidine base metabolic process // traceable author statement /// 0006220 // pyrimidine nucleotide metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0009165 // nucleotide biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046134 // pyrimidine nucleoside biosynthetic process // traceable author statement /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement","0005829 // cytosol // traceable author statement","0003824 // catalytic activity // inferred from electronic annotation /// 0004132 // dCMP deaminase activity // not recorded /// 0004132 // dCMP deaminase activity // inferred from electronic annotation /// 0004132 // dCMP deaminase activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016810 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr4:183811246-183838747 (-) // 96.16 // q35.1"]
["11763092_at",0.11457777,-0.071026325,-0.04851961,-0.030153275,0.12437248,0.030153275,0.84276426,0.59029037,-1.0303351,-0.04311358,1.0303351,"down","GYPB",2994.0,"0007165 // signal transduction // non-traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0004872 // receptor activity // non-traceable author statement","chr4:144918691-144940477 (-) // 77.17 // q31.21"]
["11730023_s_at",-0.0045671463,-0.035695076,0.0045671463,0.07920456,-0.004948616,0.031250954,0.5433164,0.15918364,-1.0331626,-0.047067314,1.0331626,"down","PILRB",29990.0,"0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // traceable author statement /// 0007171 // activation of transmembrane receptor protein tyrosine kinase activity // non-traceable author statement","0005887 // integral to plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr7:99955601-99965447 (+) // 69.58 // q22.1"]
["11752358_a_at",-0.017113924,0.13887501,0.09881663,-0.02714014,0.017113924,-0.036402464,0.5281555,0.1472035,1.0636343,0.08900218,1.0636343,"up","MYH13",8735.0,"0006936 // muscle contraction // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005859 // muscle myosin complex // traceable author statement /// 0016459 // myosin complex // inferred from electronic annotation /// 0030016 // myofibril // inferred from electronic annotation /// 0032982 // myosin filament // inferred from electronic annotation","0000146 // microfilament motor activity // traceable author statement /// 0000166 // nucleotide binding // inferred from electronic annotation /// 0003774 // motor activity // inferred from electronic annotation /// 0003779 // actin binding // non-traceable author statement /// 0003779 // actin binding // inferred from electronic annotation /// 0005516 // calmodulin binding // non-traceable author statement /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005524 // ATP binding // non-traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation","chr17:10223342-10254132 (-) // 99.91 // p13.1"]
["11756840_a_at",-0.28160286,0.033552647,0.091044426,0.015069485,-0.11714029,-0.015069485,0.9746295,0.9188688,-1.0092534,-0.0132884225,1.0092534,"down","ZFP1",162239.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:75182431-75204415 (+) // 99.8 // q23.1"]
["11725009_a_at",-0.12082672,0.009555817,0.03136182,-0.015925884,0.049773216,-0.009555578,0.8187707,0.5400999,-1.0243677,-0.034733653,1.0243677,"down","EPB42",2038.0,"0000902 // cell morphogenesis // inferred from electronic annotation /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0018149 // peptide cross-linking // inferred from electronic annotation /// 0020027 // hemoglobin metabolic process // inferred from electronic annotation /// 0043249 // erythrocyte maturation // inferred from electronic annotation /// 0048536 // spleen development // inferred from electronic annotation /// 0050801 // ion homeostasis // inferred from electronic annotation /// 0055072 // iron ion homeostasis // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005856 // cytoskeleton // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030863 // cortical cytoskeleton // inferred from electronic annotation","0003810 // protein-glutamine gamma-glutamyltransferase activity // inferred from electronic annotation /// 0005200 // structural constituent of cytoskeleton // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // traceable author statement","chr15:43487570-43513481 (-) // 85.09 // q15.2"]
["11750730_x_at",0.051383734,-0.34692526,-0.039809942,0.039809942,0.14665914,-0.16344285,0.7846549,0.47301906,-1.0863276,-0.119459175,1.0863276,"down","SNCAIP",9627.0,"0008219 // cell death // inferred from electronic annotation /// 0042417 // dopamine metabolic process // inferred from direct assay /// 0046928 // regulation of neurotransmitter secretion // inferred from direct assay /// 0090083 // regulation of inclusion body assembly // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0042734 // presynaptic membrane // non-traceable author statement /// 0043025 // neuronal cell body // non-traceable author statement","0005515 // protein binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction","chr5:121647385-121799649 (+) // 99.83 // q23.2"]
["11747229_a_at",0.20245743,0.026564598,-0.025176048,-0.047601223,-0.047601223,0.025176048,0.6543359,0.27947745,1.0653229,0.09129074,1.0653229,"up","ANKS1A",23294.0,"0006929 // substrate-dependent cell migration // inferred from sequence or structural similarity /// 0016322 // neuron remodeling // inferred from sequence or structural similarity /// 0048013 // ephrin receptor signaling pathway // inferred from sequence or structural similarity","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043005 // neuron projection // inferred from sequence or structural similarity","","chr6:34857058-35085319 (+) // 94.3 // p21.31"]
["11739206_a_at",0.123500824,0.029486656,0.15067005,-0.07326126,-0.08461571,-0.029486656,0.23481672,0.0154303955,1.1201359,0.16367377,1.1201359,"up","TTL",150465.0,"0000226 // microtubule cytoskeleton organization // inferred from electronic annotation /// 0006464 // cellular protein modification process // inferred from electronic annotation /// 0030516 // regulation of axon extension // inferred from electronic annotation","","0000166 // nucleotide binding // inferred from electronic annotation /// 0004835 // tubulin-tyrosine ligase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation","chr2:113239730-113290300 (+) // 84.02 // q13"]
["11718705_at",-0.10706663,-0.090954304,-0.010846615,0.04671526,0.10759497,0.010846615,0.32829314,0.038427517,-1.0902619,-0.12467478,1.0902619,"down","IGF1R",3480.0,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0006916 // anti-apoptosis // traceable author statement /// 0006955 // immune response // inferred from mutant phenotype /// 0007165 // signal transduction // traceable author statement /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0007409 // axonogenesis // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0014065 // phosphatidylinositol 3-kinase cascade // inferred by curator /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030010 // establishment of cell polarity // inferred from electronic annotation /// 0030238 // male sex determination // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from mutant phenotype /// 0030879 // mammary gland development // inferred from electronic annotation /// 0031017 // exocrine pancreas development // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from electronic annotation /// 0032467 // positive regulation of cytokinesis // inferred from electronic annotation /// 0033197 // response to vitamin E // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043409 // negative regulation of MAPK cascade // inferred from electronic annotation /// 0043410 // positive regulation of MAPK cascade // inferred from electronic annotation /// 0045740 // positive regulation of DNA replication // inferred from mutant phenotype /// 0045768 // positive regulation of anti-apoptosis // inferred from electronic annotation /// 0046328 // regulation of JNK cascade // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from electronic annotation /// 0048009 // insulin-like growth factor receptor signaling pathway // inferred from direct assay /// 0048009 // insulin-like growth factor receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // inferred from direct assay /// 0051054 // positive regulation of DNA metabolic process // inferred from electronic annotation /// 0051262 // protein tetramerization // inferred from direct assay /// 0051291 // protein heterooligomerization // inferred from electronic annotation /// 0051389 // inactivation of MAPKK activity // inferred from direct assay /// 0051897 // positive regulation of protein kinase B signaling cascade // inferred from electronic annotation /// 0051898 // negative regulation of protein kinase B signaling cascade // inferred from electronic annotation /// 0060740 // prostate gland epithelium morphogenesis // inferred from electronic annotation /// 0090031 // positive regulation of steroid hormone biosynthetic process // inferred from electronic annotation","0005792 // microsome // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred by curator /// 0005901 // caveola // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005010 // insulin-like growth factor-activated receptor activity // inferred from direct assay /// 0005010 // insulin-like growth factor-activated receptor activity // traceable author statement /// 0005158 // insulin receptor binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005520 // insulin-like growth factor binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0031994 // insulin-like growth factor I binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0043548 // phosphatidylinositol 3-kinase binding // inferred from physical interaction /// 0043548 // phosphatidylinositol 3-kinase binding // inferred from electronic annotation /// 0043559 // insulin binding // inferred from physical interaction /// 0043560 // insulin receptor substrate binding // inferred from physical interaction /// 0043560 // insulin receptor substrate binding // inferred from electronic annotation","chr15:99192272-99507759 (+) // 97.28 // q26.3"]
["11762994_at",0.026437044,-0.08599925,-0.026437283,0.050201893,0.3511777,-0.08447099,0.7198934,0.36910626,-1.0975622,-0.13430269,1.0975622,"down","YME1L1",10730.0,"0006508 // proteolysis // inferred from electronic annotation /// 0006515 // misfolded or incompletely synthesized protein catabolic process // inferred from mutant phenotype /// 0006955 // immune response // non-traceable author statement /// 0006968 // cellular defense response // non-traceable author statement /// 0007005 // mitochondrion organization // inferred from mutant phenotype /// 0008283 // cell proliferation // inferred from mutant phenotype /// 0030163 // protein catabolic process // inferred from electronic annotation /// 0031295 // T cell costimulation // traceable author statement /// 0045768 // positive regulation of anti-apoptosis // inferred from mutant phenotype /// 0050776 // regulation of immune response // traceable author statement /// 0050852 // T cell receptor signaling pathway // traceable author statement","0005743 // mitochondrial inner membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // non-traceable author statement /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0042287 // MHC protein binding // non-traceable author statement /// 0042605 // peptide antigen binding // non-traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation","chr14:22217461-23019608 (+) // 99.16 // q11.2"]
["11759051_x_at",-0.11703968,-0.2196846,-0.043800354,0.050341606,0.043800354,0.1406765,0.28628615,0.026570937,-1.1527777,-0.20511429,1.1527777,"down","SPANXD /// SPANXE","171489 /// 64648","","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","","chrX:140785567-140786896 (-) // 88.89 // q27.2"]
["11733343_a_at",0.024541855,0.027894974,-0.004753113,0.004753113,-0.013273239,-0.028315544,0.48594528,0.11642561,1.0197201,0.028173173,1.0197201,"up","UTP6",55813.0,"0006364 // rRNA processing // inferred from electronic annotation /// 0006396 // RNA processing // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation","","chr17:30190067-30228765 (-) // 94.1 // q11.2"]
["11715870_a_at",0.037656784,0.021559715,0.118457794,-0.021559715,-0.09758568,-0.023173332,0.36735478,0.052493643,1.0767359,0.10666437,1.0767359,"up","UFD1L",7353.0,"0001501 // skeletal system development // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation","0004843 // ubiquitin-specific protease activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr22:19437415-19466729 (-) // 95.53 // q11.21"]
["11754930_x_at",-0.016005516,0.040486336,0.045200348,-0.050519943,0.016005516,-0.024485588,0.58124685,0.1950057,1.0301781,0.042893734,1.0301781,"up","ATP1A1",476.0,"0002026 // regulation of the force of heart contraction // inferred from electronic annotation /// 0002028 // regulation of sodium ion transport // inferred from sequence or structural similarity /// 0006754 // ATP biosynthetic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // inferred from electronic annotation /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008217 // regulation of blood pressure // inferred from electronic annotation /// 0015672 // monovalent inorganic cation transport // inferred from electronic annotation /// 0031947 // negative regulation of glucocorticoid biosynthetic process // inferred from electronic annotation /// 0034220 // ion transmembrane transport // traceable author statement /// 0042493 // response to drug // inferred from electronic annotation /// 0045822 // negative regulation of heart contraction // inferred from electronic annotation /// 0045823 // positive regulation of heart contraction // inferred from electronic annotation /// 0045989 // positive regulation of striated muscle contraction // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement","0005624 // membrane fraction // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0005792 // microsome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005890 // sodium:potassium-exchanging ATPase complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from sequence or structural similarity /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0042383 // sarcolemma // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0003869 // 4-nitrophenylphosphatase activity // inferred from electronic annotation /// 0005391 // sodium:potassium-exchanging ATPase activity // inferred from electronic annotation /// 0005391 // sodium:potassium-exchanging ATPase activity // inferred from sequence or structural similarity /// 0005391 // sodium:potassium-exchanging ATPase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0015077 // monovalent inorganic cation transmembrane transporter activity // inferred from electronic annotation /// 0015662 // ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016820 // hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051087 // chaperone binding // inferred from sequence or structural similarity","chr1:116915003-116947394 (+) // 94.83 // p13.1"]
["11728984_a_at",-0.0059013367,-0.0048236847,0.020364761,0.009939194,-0.071100235,0.0048236847,0.7826221,0.46974754,1.0153607,0.021992344,1.0153607,"up","MTHFD1L",25902.0,"0006730 // one-carbon metabolic process // inferred from electronic annotation /// 0006760 // folic acid-containing compound metabolic process // inferred from direct assay /// 0009396 // folic acid-containing compound biosynthetic process // inferred from electronic annotation /// 0015942 // formate metabolic process // inferred from direct assay /// 0035999 // tetrahydrofolate interconversion // inferred from electronic annotation /// 0046653 // tetrahydrofolate metabolic process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004329 // formate-tetrahydrofolate ligase activity // inferred from direct assay /// 0004329 // formate-tetrahydrofolate ligase activity // inferred from electronic annotation /// 0004488 // methylenetetrahydrofolate dehydrogenase (NADP+) activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay","chr6:151186690-151423021 (+) // 96.85 // q25.1"]
["11724248_s_at",0.098659515,-0.077129364,-0.055220604,-0.014623642,0.014623642,0.043642998,0.8832203,0.67873096,-1.0180284,-0.025777778,1.0180284,"down","TMEM127",55654.0,"0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0032007 // negative regulation of TOR signaling cascade // inferred from mutant phenotype","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr2:96915945-96931751 (-) // 87.52 // q11.2"]
["11732533_a_at",0.053061485,0.16604614,0.2394576,-0.15909195,-0.053061485,-0.16921616,0.2192778,0.013049294,1.2141767,0.27997833,1.2141767,"up","LMNB1",4001.0,"0006915 // apoptotic process // traceable author statement /// 0006921 // cellular component disassembly involved in apoptotic process // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // traceable author statement /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005637 // nuclear inner membrane // inferred from electronic annotation /// 0005638 // lamin filament // inferred from electronic annotation /// 0005638 // lamin filament // traceable author statement /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005882 // intermediate filament // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016363 // nuclear matrix // inferred from electronic annotation","0005198 // structural molecule activity // inferred from electronic annotation /// 0005198 // structural molecule activity // traceable author statement /// 0043274 // phospholipase binding // inferred from electronic annotation","chr5:126112832-126172808 (+) // 98.63 // q23.2"]
["11718035_at",-0.052171707,-0.0129032135,0.04769802,0.028867722,-0.0440979,0.0129032135,0.96636117,0.89739823,-1.0034833,-0.0050166007,1.0034833,"down","PPIL1",51645.0,"0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0000413 // protein peptidyl-prolyl isomerization // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006457 // protein folding // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation","0005681 // spliceosomal complex // inferred from electronic annotation /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay","0003755 // peptidyl-prolyl cis-trans isomerase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation","chr6:36822604-36842822 (-) // 97.55 // p21.2"]
["11749032_x_at",0.06136179,-0.0024938583,0.19342756,-0.2108016,0.0024938583,-0.13314486,0.4258309,0.08021532,1.1470402,0.19791602,1.1470402,"up","PTBP3",9991.0,"0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0033119 // negative regulation of RNA splicing // inferred from direct assay /// 0043249 // erythrocyte maturation // inferred from electronic annotation /// 0045595 // regulation of cell differentiation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement","chr9:114985827-115095306 (-) // 97.96 // q32"]
["11743761_a_at",-0.015191555,-0.047668934,-0.034831047,0.068060875,0.05349207,0.015191555,0.2199301,0.01313638,-1.05566,-0.078145266,1.05566,"down","SNIP1",79753.0,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007249 // I-kappaB kinase/NF-kappaB cascade // inferred from electronic annotation /// 0031047 // gene silencing by RNA // inferred from electronic annotation /// 0035196 // production of miRNAs involved in gene silencing by miRNA // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr1:38001679-38019945 (-) // 90.29 // p34.3"]
["11727165_a_at",0.022054672,-0.05259323,0.14128494,-0.020684242,0.020684242,-0.03928852,0.7671622,0.44562036,1.0352733,0.05001169,1.0352733,"up","KIAA1731",85459.0,"","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation","","chr11:93394812-93463522 (+) // 98.58 // q21"]
["11740731_x_at",0.04351473,-0.05419445,0.07034254,0.02639389,-0.17636251,-0.026394367,0.69581324,0.33327755,1.0560479,0.07867529,1.0560479,"up","C10orf125",282969.0,"0005996 // monosaccharide metabolic process // inferred from electronic annotation /// 0006004 // fucose metabolic process // inferred from sequence or structural similarity /// 0006004 // fucose metabolic process // inferred from electronic annotation","","0016853 // isomerase activity // inferred from electronic annotation /// 0016857 // racemase and epimerase activity, acting on carbohydrates and derivatives // inferred from sequence or structural similarity /// 0016857 // racemase and epimerase activity, acting on carbohydrates and derivatives // inferred from electronic annotation /// 0042806 // fucose binding // inferred from sequence or structural similarity /// 0042806 // fucose binding // inferred from electronic annotation /// 0048029 // monosaccharide binding // inferred from electronic annotation","chr10:135168577-135171529 (-) // 98.24 // q26.3"]
["11726346_a_at",-0.06368351,0.07874584,0.040318012,0.010053635,-0.10493517,-0.010053635,0.73214114,0.38923022,1.0377353,0.053438555,1.0377353,"up","LAT2",7462.0,"0019722 // calcium-mediated signaling // inferred from genetic interaction /// 0035556 // intracellular signal transduction // inferred from genetic interaction /// 0042113 // B cell activation // inferred from direct assay /// 0042113 // B cell activation // traceable author statement /// 0043303 // mast cell degranulation // inferred from electronic annotation /// 0050853 // B cell receptor signaling pathway // inferred from direct assay","0005622 // intracellular // inferred from genetic interaction /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0045121 // membrane raft // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0042169 // SH2 domain binding // inferred from mutant phenotype","chr7:73624086-73644161 (+) // 92.78 // q11.23"]
["11741209_a_at",0.0057268143,-0.014807224,0.048125744,-0.05022669,-0.005727291,0.00827837,0.6871248,0.32164082,1.0202389,0.02890698,1.0202389,"up","ZNF280D",54816.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr15:56991557-57025787 (-) // 64.54 // q21.3"]
["11727984_at",0.06795859,0.017938137,-0.17333007,-0.017937899,0.094441414,-0.23609829,0.95130205,0.8530092,1.0168126,0.02405376,1.0168126,"up","ODZ3",55714.0,"0007165 // signal transduction // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr4:183245096-183724177 (+) // 97.98 // q35.1"]
["11744122_s_at",0.05530262,0.039357185,0.07532501,-0.049290657,-0.039357185,-0.07917118,0.11455932,0.002076976,1.0811759,0.11260129,1.0811759,"up","FAM156A /// FAM156B","29057 /// 727866","","0005635 // nuclear envelope // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chrX:52925993-52937587 (+) // 85.86 // p11.22 /// chrX:52976461-52988043 (-) // 85.84 // p11.22"]
["11758089_s_at",0.013296127,-0.04376316,0.072491646,-0.012999535,0.012999535,-0.030077934,0.8184695,0.5390184,1.0167987,0.02403414,1.0167987,"up","HMMR",3161.0,"","0005737 // cytoplasm // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005540 // hyaluronic acid binding // inferred from electronic annotation","chr5:162918527-162918947 (+) // 70.28 // q34"]
["11754728_a_at",0.06920433,1.9836426E-4,-0.029425621,-1.9836426E-4,0.24171495,-0.011832237,0.8032547,0.5105826,-1.0448065,-0.06323575,1.0448065,"down","MAL",4118.0,"0001766 // membrane raft polarization // traceable author statement /// 0006917 // induction of apoptosis // non-traceable author statement /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0007417 // central nervous system development // traceable author statement /// 0030154 // cell differentiation // traceable author statement /// 0042552 // myelination // non-traceable author statement /// 0042552 // myelination // traceable author statement /// 0042552 // myelination // inferred from electronic annotation /// 0045176 // apical protein localization // traceable author statement","0000300 // peripheral to membrane of membrane fraction // inferred from electronic annotation /// 0005768 // endosome // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // traceable author statement /// 0045121 // membrane raft // inferred from direct assay /// 0045121 // membrane raft // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008289 // lipid binding // traceable author statement /// 0015267 // channel activity // traceable author statement /// 0016505 // apoptotic protease activator activity // non-traceable author statement /// 0019911 // structural constituent of myelin sheath // inferred from direct assay /// 0019911 // structural constituent of myelin sheath // inferred from electronic annotation","chr2:95717397-95719736 (+) // 92.19 // q11.1"]
["11742017_a_at",-0.1072526,-0.02944541,-0.1558671,0.088483095,0.04765725,0.029445648,0.25744495,0.019980585,-1.1116611,-0.15271701,1.1116611,"down","IRAK3",11213.0,"0001960 // negative regulation of cytokine-mediated signaling pathway // inferred by curator /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0009615 // response to virus // inferred by curator /// 0010933 // positive regulation of macrophage tolerance induction // inferred from sequence or structural similarity /// 0010933 // positive regulation of macrophage tolerance induction // inferred from electronic annotation /// 0010936 // negative regulation of macrophage cytokine production // inferred from sequence or structural similarity /// 0010936 // negative regulation of macrophage cytokine production // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // inferred from sequence or structural similarity /// 0019221 // cytokine-mediated signaling pathway // inferred from electronic annotation /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from mutant phenotype /// 0032494 // response to peptidoglycan // inferred from sequence or structural similarity /// 0032494 // response to peptidoglycan // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from sequence or structural similarity /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0032695 // negative regulation of interleukin-12 production // inferred from mutant phenotype /// 0032695 // negative regulation of interleukin-12 production // inferred from sequence or structural similarity /// 0032695 // negative regulation of interleukin-12 production // inferred from electronic annotation /// 0032715 // negative regulation of interleukin-6 production // inferred from mutant phenotype /// 0032715 // negative regulation of interleukin-6 production // inferred from sequence or structural similarity /// 0032715 // negative regulation of interleukin-6 production // inferred from electronic annotation /// 0032720 // negative regulation of tumor necrosis factor production // inferred from mutant phenotype /// 0032720 // negative regulation of tumor necrosis factor production // inferred from electronic annotation /// 0034122 // negative regulation of toll-like receptor signaling pathway // inferred from sequence or structural similarity /// 0034122 // negative regulation of toll-like receptor signaling pathway // inferred from electronic annotation /// 0042177 // negative regulation of protein catabolic process // inferred from mutant phenotype /// 0042177 // negative regulation of protein catabolic process // inferred from electronic annotation /// 0043242 // negative regulation of protein complex disassembly // inferred from mutant phenotype /// 0043244 // regulation of protein complex disassembly // inferred from sequence or structural similarity /// 0043244 // regulation of protein complex disassembly // inferred from electronic annotation /// 0043330 // response to exogenous dsRNA // inferred from sequence or structural similarity /// 0043330 // response to exogenous dsRNA // inferred from electronic annotation /// 0043407 // negative regulation of MAP kinase activity // inferred from mutant phenotype /// 0043407 // negative regulation of MAP kinase activity // inferred from electronic annotation /// 0045824 // negative regulation of innate immune response // inferred from sequence or structural similarity /// 0045824 // negative regulation of innate immune response // inferred from electronic annotation /// 0046777 // protein autophosphorylation // inferred from electronic annotation /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from mutant phenotype /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from electronic annotation /// 0070498 // interleukin-1-mediated signaling pathway // inferred from mutant phenotype /// 0070498 // interleukin-1-mediated signaling pathway // inferred from electronic annotation /// 0070555 // response to interleukin-1 // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from direct assay /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from physical interaction","chr12:66582977-66648392 (+) // 68.88 // q14.3"]
["11738131_a_at",0.09233856,-0.07722521,-0.026101828,-0.22425556,0.04228306,0.026101828,0.87174165,0.6538347,1.0340415,0.04829412,1.0340415,"up","RNF212",285498.0,"","","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr4:1065873-1107582 (-) // 51.43 // p16.3"]
["11750308_s_at",-0.021590233,-7.9345703E-4,-0.055940628,0.0039691925,7.9345703E-4,0.09626007,0.54794884,0.1646157,-1.0423084,-0.059782274,1.0423084,"down","C20orf3",57136.0,"0009058 // biosynthetic process // inferred from electronic annotation","0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004064 // arylesterase activity // inferred from direct assay /// 0016844 // strictosidine synthase activity // inferred from electronic annotation","chr20:24944120-24973566 (-) // 99.88 // p11.21"]
["11718670_at",-0.009551048,0.009551048,0.17275333,0.028404713,-0.056652546,-0.026984692,0.6665902,0.29410633,1.054088,0.07599531,1.054088,"up","MED9",55090.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0016592 // mediator complex // inferred from electronic annotation","0001104 // RNA polymerase II transcription cofactor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr17:17380299-17396650 (+) // 94.92 // p11.2"]
["11744710_a_at",0.014159203,0.058721066,-0.010321617,-0.07837391,-0.024753094,0.010322094,0.57486945,0.18913257,1.0365486,0.05178778,1.0365486,"up","TTLL4",9654.0,"0006464 // cellular protein modification process // inferred from electronic annotation /// 0018095 // protein polyglutamylation // inferred from sequence or structural similarity /// 0018095 // protein polyglutamylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0005932 // microtubule basal body // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0004835 // tubulin-tyrosine ligase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0015631 // tubulin binding // inferred from sequence or structural similarity /// 0015631 // tubulin binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation","chr2:219575642-219619410 (+) // 97.25 // q35"]
["11751598_a_at",0.17711544,0.07443762,0.09609127,-0.19648075,-0.074438095,-0.1441431,0.16330189,0.005735981,1.1927035,0.25423542,1.1927035,"up","DPP7",29952.0,"0006508 // proteolysis // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0004177 // aminopeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // traceable author statement /// 0008239 // dipeptidyl-peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr9:140006934-140008957 (-) // 99.15 // q34.3"]
["11743618_at",-0.12119293,-0.15802574,-0.040897846,0.0461874,0.040897846,0.06136799,0.20616096,0.011269048,-1.1143403,-0.15618987,1.1143403,"down","ITGA2",3673.0,"0007155 // cell adhesion // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007160 // cell-matrix adhesion // traceable author statement /// 0007229 // integrin-mediated signaling pathway // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0009887 // organ morphogenesis // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation","0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0008305 // integrin complex // inferred from electronic annotation /// 0008305 // integrin complex // traceable author statement /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0045178 // basal part of cell // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005518 // collagen binding // traceable author statement","chr5:52285155-52390608 (+) // 88.18 // q11.2"]
["11745298_s_at",0.0017843246,-0.11508894,-0.13256216,0.018953323,-0.0017843246,0.032351017,0.43506944,0.08548227,-1.0706317,-0.09846233,1.0706317,"down","ITFG2 /// LOC100507424","100507424 /// 55846","","","","chr12:2921830-2927662 (+) // 82.66 // p13.33"]
["11749972_a_at",0.29855824,0.005841732,-0.12938356,0.03275442,-0.10472202,-0.005841732,0.82908475,0.5600666,1.060155,0.08427525,1.060155,"up","TIE1",7075.0,"0001525 // angiogenesis // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007498 // mesoderm development // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016525 // negative regulation of angiogenesis // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // inferred from electronic annotation /// 0032526 // response to retinoic acid // inferred from electronic annotation /// 0045026 // plasma membrane fusion // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr1:43766742-43774639 (+) // 99.91 // p34.2"]
["11719872_a_at",-0.013607025,0.0029325485,0.19423485,-0.0029325485,0.04999256,-0.053977013,0.7607859,0.4343095,1.0449924,0.063492514,1.0449924,"up","LTV1",84946.0,"","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","","chr6:144164409-144184943 (+) // 96.75 // q24.2"]
["11723465_a_at",-0.07739043,0.10920811,-0.12430549,0.086761236,0.07147217,-0.07147217,0.8145465,0.5314069,-1.0422848,-0.059749607,1.0422848,"down","CELF2",10659.0,"0006376 // mRNA splice site selection // inferred from electronic annotation /// 0006396 // RNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008016 // regulation of heart contraction // traceable author statement","0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement","chr10:11047258-11378670 (+) // 98.66 // p14"]
["11722732_at",0.12210369,-0.13164091,0.012672424,-0.012672424,0.048866272,-0.07272434,0.96033305,0.8788909,1.0092069,0.013221962,1.0092069,"up","APPL1",26060.0,"0006915 // apoptotic process // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0008283 // cell proliferation // inferred from direct assay /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0046324 // regulation of glucose import // inferred from mutant phenotype /// 0090003 // regulation of establishment of protein localization in plasma membrane // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred by curator /// 0005768 // endosome // inferred from electronic annotation /// 0005792 // microsome // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0010008 // endosome membrane // inferred from direct assay /// 0010008 // endosome membrane // traceable author statement /// 0012506 // vesicle membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016581 // NuRD complex // inferred from direct assay /// 0031901 // early endosome membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0043422 // protein kinase B binding // inferred from physical interaction","chr3:57261764-57307486 (+) // 93.19 // p14.3"]
["11729530_a_at",-0.08538532,-0.037715912,0.037715912,-0.1930871,0.10280275,0.08393383,0.9363405,0.8091767,-1.0184287,-0.026344957,1.0184287,"down","ENTPD2",954.0,"0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0009181 // purine ribonucleoside diphosphate catabolic process // inferred from electronic annotation /// 0030168 // platelet activation // inferred from electronic annotation","0005605 // basal lamina // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0017110 // nucleoside-diphosphatase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation","chr9:139942552-139948527 (-) // 85.78 // q34.3"]
["11758680_s_at",-0.046138525,-0.004985094,-0.04518819,0.004985094,0.03525257,0.15826297,0.4829972,0.11426876,-1.0704896,-0.09827084,1.0704896,"down","UCHL1",7345.0,"0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0007409 // axonogenesis // inferred from electronic annotation /// 0007412 // axon target recognition // inferred from electronic annotation /// 0007628 // adult walking behavior // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from electronic annotation /// 0016579 // protein deubiquitination // inferred from direct assay /// 0019896 // axon transport of mitochondrion // inferred from electronic annotation /// 0042755 // eating behavior // inferred from electronic annotation /// 0043407 // negative regulation of MAP kinase activity // inferred from direct assay /// 0050905 // neuromuscular process // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0004197 // cysteine-type endopeptidase activity // inferred from direct assay /// 0004221 // ubiquitin thiolesterase activity // traceable author statement /// 0004221 // ubiquitin thiolesterase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0008242 // omega peptidase activity // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0031694 // alpha-2A adrenergic receptor binding // inferred from physical interaction /// 0043130 // ubiquitin binding // inferred from direct assay /// 0043130 // ubiquitin binding // inferred from electronic annotation","chr4:41270151-41270414 (+) // 99.25 // p13"]
["11735149_at",-0.023899555,0.023899555,-0.18083668,-0.053447247,0.05845213,0.21403122,0.6312071,0.25018522,-1.0967927,-0.13329087,1.0967927,"down","ANGPTL6",83854.0,"0001525 // angiogenesis // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0030141 // secretory granule // inferred from electronic annotation","0005102 // receptor binding // inferred from electronic annotation","chr19:10203014-10213469 (-) // 93.56 // p13.2"]
["11732986_at",0.19665289,-0.10685134,0.26830697,-0.18767095,0.10685134,-0.12988806,0.6422963,0.26409394,1.1404518,0.18960546,1.1404518,"up","OR3A1",4994.0,"0007165 // signal transduction // non-traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // traceable author statement /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // traceable author statement","chr17:3194928-3195876 (-) // 100.0 // p13.3"]
["11758918_s_at",0.06474686,0.009615421,-0.009615421,-0.04399872,-0.026818752,0.01657772,0.6219806,0.23862664,1.0278732,0.039662242,1.0278732,"up","KIFAP3 /// TFCP2","22920 /// 7024","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006461 // protein complex assembly // traceable author statement /// 0007017 // microtubule-based process // inferred from sequence or structural similarity /// 0007017 // microtubule-based process // inferred from electronic annotation /// 0007018 // microtubule-based movement // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008104 // protein localization // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0046587 // positive regulation of calcium-dependent cell-cell adhesion // inferred from electronic annotation /// 0072383 // plus-end-directed vesicle transport along microtubule // traceable author statement","0000794 // condensed nuclear chromosome // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005813 // centrosome // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005871 // kinesin complex // inferred from electronic annotation /// 0005876 // spindle microtubule // inferred from direct assay /// 0016939 // kinesin II complex // inferred from direct assay /// 0016939 // kinesin II complex // inferred from sequence or structural similarity /// 0016939 // kinesin II complex // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0019894 // kinesin binding // inferred from physical interaction /// 0019894 // kinesin binding // inferred from electronic annotation","chr12:51487445-51566938 (-) // 91.42 // q13.12"]
["11729185_at",0.08240318,0.038980484,0.046076775,-0.0983305,-0.12280178,-0.038980484,0.17729603,0.0072896867,1.1038349,0.14252436,1.1038349,"up","PNO1",56902.0,"","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation","chr2:68384962-68403595 (+) // 72.17 // p14"]
["11744451_a_at",-0.008005142,0.00854969,0.05642128,0.008005142,-0.034662247,-0.02982521,0.5695585,0.18374705,1.0265586,0.037816036,1.0265586,"up","DHX38",9785.0,"0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred from direct assay /// 0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0031124 // mRNA 3'-end processing // traceable author statement","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr16:72127910-72146811 (+) // 98.17 // q22.2"]
["11731692_a_at",0.0077626705,0.004183054,-0.0041828156,-0.020311356,0.027470827,-0.12316942,0.7440925,0.40714863,1.0290104,0.041257583,1.0290104,"up","BPIFB2",80341.0,"","0005576 // extracellular region // inferred from electronic annotation","0008289 // lipid binding // inferred from electronic annotation","chr20:31595383-31611514 (+) // 91.95 // q11.21"]
["11731495_at",-0.0058550835,0.064353466,0.053646088,-0.0067043304,0.0058555603,-0.049911022,0.49268344,0.1205922,1.0383562,0.05430141,1.0383562,"up","GDAP2",54834.0,"0032526 // response to retinoic acid // inferred from electronic annotation","","","chr1:118406108-118472302 (-) // 80.77 // p12"]
["11743996_a_at",0.055419922,0.012379646,0.018664837,-0.059419632,-0.09709501,-0.012380123,0.32771817,0.03815829,1.0607758,0.08511971,1.0607758,"up","ACTR1A",10121.0,"0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0016192 // vesicle-mediated transport // traceable author statement","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005869 // dynactin complex // traceable author statement /// 0005875 // microtubule associated complex // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation","chr10:104238985-104262509 (-) // 96.04 // q24.32"]
["11739342_a_at",0.09783077,0.015563011,-0.23427439,-0.15380478,0.023630619,-0.015563011,0.983964,0.94527876,1.0057596,0.008285504,1.0057596,"up","TNFRSF10C",8794.0,"0006915 // apoptotic process // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement","0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0031225 // anchored to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // traceable author statement /// 0045569 // TRAIL binding // inferred from electronic annotation","chr8:22960102-22974950 (+) // 98.11 // p21.3"]
["11721642_x_at",0.11716795,0.016069412,-0.019607067,-0.016069412,-0.025505543,0.08246088,0.8810742,0.67426836,1.0169495,0.024248088,1.0169495,"up","CAP2",10486.0,"0000902 // cell morphogenesis // inferred from electronic annotation /// 0007010 // cytoskeleton organization // inferred from electronic annotation /// 0007163 // establishment or maintenance of cell polarity // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007190 // activation of adenylate cyclase activity // traceable author statement /// 0007411 // axon guidance // traceable author statement","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation","chr6:17393460-17558013 (+) // 94.85 // p22.3"]
["11735284_x_at",-0.010966301,0.010966301,-0.022022247,0.043182373,-0.018742561,0.041644096,0.6415995,0.26319882,-1.0205655,-0.029368792,1.0205655,"down","MLL5",55904.0,"0002446 // neutrophil mediated immunity // inferred from sequence or structural similarity /// 0002446 // neutrophil mediated immunity // inferred from electronic annotation /// 0006306 // DNA methylation // inferred from sequence or structural similarity /// 0006306 // DNA methylation // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0030218 // erythrocyte differentiation // inferred from sequence or structural similarity /// 0030218 // erythrocyte differentiation // inferred from electronic annotation /// 0030854 // positive regulation of granulocyte differentiation // inferred from mutant phenotype /// 0032259 // methylation // inferred from electronic annotation /// 0034968 // histone lysine methylation // inferred from electronic annotation /// 0042119 // neutrophil activation // inferred from sequence or structural similarity /// 0042119 // neutrophil activation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0048384 // retinoic acid receptor signaling pathway // inferred from mutant phenotype /// 0051568 // histone H3-K4 methylation // inferred from direct assay /// 0071300 // cellular response to retinoic acid // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation /// 0070688 // MLL5-L complex // inferred from direct assay","0003713 // transcription coactivator activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0018024 // histone-lysine N-methyltransferase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0042800 // histone methyltransferase activity (H3-K4 specific) // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:104654636-104754531 (+) // 99.23 // q22.3"]
["11745649_s_at",-0.083853245,-0.019199848,0.034776688,0.002518177,0.033648014,-0.0025177002,0.7396856,0.4000247,-1.0238291,-0.03397492,1.0238291,"down","SS18 /// SSX2","6757 /// 6760","0000226 // microtubule cytoskeleton organization // inferred from electronic annotation /// 0000902 // cell morphogenesis // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0007010 // cytoskeleton organization // inferred from electronic annotation /// 0007243 // intracellular protein kinase cascade // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0048013 // ephrin receptor signaling pathway // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005881 // cytoplasmic microtubule // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003714 // transcription corepressor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0030374 // ligand-dependent nuclear receptor transcription coactivator activity // inferred from direct assay","chr18:23612362-23670542 (-) // 78.09 // q11.2"]
["11730027_at",0.026410103,-0.017379284,-0.05297327,0.04711294,0.017379284,-0.046241283,0.84475005,0.5940661,-1.0144734,-0.020731091,1.0144734,"down","GPHA2",170589.0,"","0005576 // extracellular region // inferred from direct assay /// 0005576 // extracellular region // inferred from electronic annotation","0005179 // hormone activity // inferred from electronic annotation","chr11:64701942-64702933 (-) // 88.38 // q13.1"]
["11760127_at",0.0032777786,-0.0032777786,0.052544594,-0.028207779,0.088926315,-0.084394455,0.87593234,0.6625547,1.0177667,0.025406914,1.0177667,"up","LIMS1",3987.0,"0007569 // cell aging // traceable author statement /// 0034329 // cell junction assembly // traceable author statement /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0071560 // cellular response to transforming growth factor beta stimulus // inferred from expression pattern","0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0005925 // focal adhesion // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:109150810-109303702 (+) // 82.8 // q12.3"]
["11754863_s_at",0.018118858,0.011676788,-0.027140617,-0.032388687,-0.011676788,0.04078293,0.9829811,0.94289196,1.0013728,0.0019791939,1.0013728,"up","VPS37C",55048.0,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016032 // viral reproduction // traceable author statement /// 0016044 // cellular membrane organization // traceable author statement /// 0016197 // endosomal transport // traceable author statement /// 0046788 // egress of virus within host cell // traceable author statement","0005768 // endosome // inferred from electronic annotation /// 0010008 // endosome membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0031902 // late endosome membrane // inferred from electronic annotation","","chr11:60897729-60928925 (-) // 84.62 // q12.2"]
["11735443_at",-0.039144754,0.047256947,-9.584427E-4,-0.08850789,0.10807252,9.584427E-4,0.98421603,0.94621825,-1.0030937,-0.0044564037,1.0030937,"down","ZNF781",163115.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:38158650-38183216 (-) // 98.6 // q13.12"]
["11716660_at",0.16716814,0.089702845,-0.09735131,-0.0370996,-0.1120801,0.03709936,0.7199104,0.36920816,1.0647638,0.090533406,1.0647638,"up","GRAMD4",23151.0,"0006915 // apoptotic process // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation","","chr22:47016298-47075682 (+) // 96.08 // q13.31"]
["11732254_a_at",-0.028743744,-0.1754446,0.054369926,0.044254303,-0.0077371597,0.0077371597,0.7403641,0.4011109,-1.0458609,-0.06469096,1.0458609,"down","MED18",54797.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0016592 // mediator complex // inferred from direct assay /// 0016592 // mediator complex // inferred from electronic annotation","0001104 // RNA polymerase II transcription cofactor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr1:28655480-28662478 (+) // 67.38 // p35.3"]
["11725267_a_at",-0.07707715,0.06263113,0.34229755,-0.06263113,0.11101055,-0.092084885,0.7539509,0.4221018,1.0896406,0.12385239,1.0896406,"up","FAT4",79633.0,"0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr4:126237566-126414087 (+) // 98.87 // q28.1"]
["11733439_a_at",-0.07692504,0.025906801,-0.2523141,0.24258304,-0.025906801,0.05001092,0.55484945,0.17071773,-1.1407689,-0.19000654,1.1407689,"down","GBP5",115362.0,"0006184 // GTP catabolic process // inferred from electronic annotation /// 0071346 // cellular response to interferon-gamma // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation","chr1:89724635-89735258 (-) // 77.29 // p22.2"]
["11740317_at",-0.035645485,-0.17532158,0.10121584,-0.022140503,0.026000977,0.022140503,0.85126007,0.60752344,-1.0318625,-0.045250732,1.0318625,"down","MIP",4284.0,"0002088 // lens development in camera-type eye // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006833 // water transport // traceable author statement /// 0006833 // water transport // inferred from electronic annotation /// 0007601 // visual perception // inferred from electronic annotation /// 0015722 // canalicular bile acid transport // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005624 // membrane fraction // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0005921 // gap junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0046691 // intracellular canaliculus // inferred from electronic annotation","0005212 // structural constituent of eye lens // inferred from electronic annotation /// 0005215 // transporter activity // traceable author statement /// 0005215 // transporter activity // inferred from electronic annotation /// 0015250 // water channel activity // inferred from electronic annotation","chr12:56843285-56848435 (-) // 94.06 // q13.3"]
["11750063_a_at",-0.01718402,0.01718378,0.019518852,-0.11951256,0.1024189,-0.25926638,0.742373,0.40469435,1.0707533,0.098626174,1.0707533,"up","ANKRD35",148741.0,"","","","chr1:145549243-145561166 (+) // 94.59 // q21.1"]
["11753821_x_at",0.038928032,0.06081772,-0.01414299,-0.006166458,-0.045248985,0.0061655045,0.5686596,0.18303245,1.0306951,0.04361759,1.0306951,"up","OAZ1",4946.0,"0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006596 // polyamine biosynthetic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0043086 // negative regulation of catalytic activity // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement","0005829 // cytosol // traceable author statement","0004857 // enzyme inhibitor activity // inferred from electronic annotation /// 0008073 // ornithine decarboxylase inhibitor activity // inferred from electronic annotation /// 0008073 // ornithine decarboxylase inhibitor activity // traceable author statement","chr19:2269556-2271483 (+) // 100.0 // p13.3"]
["11746856_a_at",-0.017196655,0.0023007393,-0.06536484,0.13369703,-0.0023007393,0.13386774,0.42762196,0.08102984,-1.0831064,-0.11517497,1.0831064,"down","SERPINE1",5054.0,"0000302 // response to reactive oxygen species // inferred from electronic annotation /// 0001300 // chronological cell aging // inferred from expression pattern /// 0001525 // angiogenesis // inferred from expression pattern /// 0002576 // platelet degranulation // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0010469 // regulation of receptor activity // inferred from direct assay /// 0010757 // negative regulation of plasminogen activation // inferred from direct assay /// 0010757 // negative regulation of plasminogen activation // inferred from mutant phenotype /// 0010951 // negative regulation of endopeptidase activity // inferred from direct assay /// 0014912 // negative regulation of smooth muscle cell migration // inferred from direct assay /// 0030168 // platelet activation // traceable author statement /// 0030194 // positive regulation of blood coagulation // inferred from mutant phenotype /// 0030195 // negative regulation of blood coagulation // inferred by curator /// 0030336 // negative regulation of cell migration // inferred from direct assay /// 0032757 // positive regulation of interleukin-8 production // inferred from mutant phenotype /// 0033629 // negative regulation of cell adhesion mediated by integrin // inferred from direct assay /// 0034097 // response to cytokine stimulus // inferred from electronic annotation /// 0035491 // positive regulation of leukotriene production involved in inflammatory response // inferred from mutant phenotype /// 0042060 // wound healing // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042246 // tissue regeneration // inferred from electronic annotation /// 0042593 // glucose homeostasis // inferred from electronic annotation /// 0042730 // fibrinolysis // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043627 // response to estrogen stimulus // inferred from electronic annotation /// 0045765 // regulation of angiogenesis // inferred from electronic annotation /// 0045766 // positive regulation of angiogenesis // inferred from mutant phenotype /// 0048260 // positive regulation of receptor-mediated endocytosis // inferred from direct assay /// 0048260 // positive regulation of receptor-mediated endocytosis // inferred from electronic annotation /// 0050729 // positive regulation of inflammatory response // inferred from genetic interaction /// 0050820 // positive regulation of coagulation // inferred from electronic annotation /// 0050829 // defense response to Gram-negative bacterium // inferred from genetic interaction /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation /// 0051918 // negative regulation of fibrinolysis // inferred from direct assay /// 0055093 // response to hyperoxia // inferred from electronic annotation /// 0061044 // negative regulation of vascular wound healing // inferred from genetic interaction /// 0061045 // negative regulation of wound healing // inferred by curator /// 0070887 // cellular response to chemical stimulus // inferred from mutant phenotype /// 0071222 // cellular response to lipopolysaccharide // inferred from mutant phenotype /// 0071258 // cellular response to gravity // inferred from electronic annotation /// 0090026 // positive regulation of monocyte chemotaxis // inferred from mutant phenotype /// 2000098 // negative regulation of smooth muscle cell-matrix adhesion // inferred from direct assay","0005576 // extracellular region // inferred from direct assay /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from electronic annotation /// 0031093 // platelet alpha granule lumen // traceable author statement","0002020 // protease binding // inferred from physical interaction /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from direct assay /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from physical interaction /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation","chr7:100770383-100781574 (+) // 89.86 // q22.1"]
["11722420_a_at",-0.0055713654,-0.07036781,-0.017259598,0.022611141,0.047842026,0.0055713654,0.41396323,0.073637955,-1.0398734,-0.056407843,1.0398734,"down","PPP3CC",5533.0,"0006915 // apoptotic process // traceable author statement /// 0008629 // induction of apoptosis by intracellular signals // traceable author statement /// 0008633 // activation of pro-apoptotic gene products // traceable author statement","0005829 // cytosol // traceable author statement","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:22298331-22398979 (+) // 97.52 // p21.3"]
["11744908_a_at",-0.008735657,-0.029070854,0.008735657,-0.1140151,0.06763077,0.014183044,0.9956256,0.9857698,1.0007236,0.0010435572,1.0007236,"up","CCDC23",374969.0,"0009306 // protein secretion // inferred from direct assay /// 0010596 // negative regulation of endothelial cell migration // inferred from genetic interaction /// 0031397 // negative regulation of protein ubiquitination // inferred from direct assay","0045177 // apical part of cell // inferred from direct assay","","chr1:43272726-43282936 (-) // 89.3 // p34.2"]
["11730921_at",0.019182682,-0.0018119812,-0.21717358,-0.07337093,0.057269573,0.0018119812,0.80041814,0.50478333,-1.0437946,-0.061837886,1.0437946,"down","NHLRC4",283948.0,"","","","chr16:617004-619494 (+) // 87.34 // p13.3"]
["11721270_at",-0.00614357,0.15703297,-0.10500407,0.0018982887,-0.0018982887,0.15067697,0.9012045,0.72187585,-1.0245075,-0.034930576,1.0245075,"down","SCG3",29106.0,"0002576 // platelet degranulation // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0030168 // platelet activation // traceable author statement","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0030141 // secretory granule // traceable author statement /// 0030658 // transport vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","","chr15:51973549-52013222 (+) // 85.87 // q21.2"]
["11724169_s_at",-0.22833109,0.0019044876,-0.0019044876,0.004845619,-0.035885334,0.0069561005,0.7582719,0.42865324,-1.0483224,-0.06808253,1.0483224,"down","ZNF322 /// ZNF322P1","387328 /// 79692","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:26634611-26659963 (-) // 98.71 // p22.2 /// chr9:99957632-99962422 (-) // 98.32 // q22.33"]
["11745194_a_at",0.007507324,-0.016263008,0.07446861,-0.009969711,0.017062187,-0.007507324,0.78965646,0.48245195,1.0153961,0.022042649,1.0153961,"up","OXCT1",5019.0,"0007420 // brain development // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0007584 // response to nutrient // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009725 // response to hormone stimulus // inferred from electronic annotation /// 0014823 // response to activity // inferred from electronic annotation /// 0032024 // positive regulation of insulin secretion // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042594 // response to starvation // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045471 // response to ethanol // inferred from electronic annotation /// 0046950 // cellular ketone body metabolic process // inferred from mutant phenotype /// 0046950 // cellular ketone body metabolic process // traceable author statement /// 0046950 // cellular ketone body metabolic process // inferred from electronic annotation /// 0046952 // ketone body catabolic process // traceable author statement /// 0046952 // ketone body catabolic process // inferred from electronic annotation /// 0060612 // adipose tissue development // inferred from electronic annotation /// 0071229 // cellular response to acid // inferred from electronic annotation /// 0071333 // cellular response to glucose stimulus // inferred from electronic annotation","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // non-traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement /// 0005759 // mitochondrial matrix // inferred from electronic annotation","0008260 // 3-oxoacid CoA-transferase activity // inferred from mutant phenotype /// 0008260 // 3-oxoacid CoA-transferase activity // traceable author statement /// 0008260 // 3-oxoacid CoA-transferase activity // inferred from electronic annotation /// 0008410 // CoA-transferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // non-traceable author statement /// 0042803 // protein homodimerization activity // inferred from electronic annotation","chr5:41730168-41870561 (-) // 98.96 // p13.1"]
["11722271_at",-0.08806324,-0.082952976,0.034612656,-0.004986763,0.051630974,0.00498724,0.6108006,0.22481965,-1.0444028,-0.062678285,1.0444028,"down","MSANTD4",84437.0,"","0005634 // nucleus // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation","chr11:105878646-105892960 (-) // 89.91 // q22.3"]
["11764000_at",0.17743587,-0.1270175,-0.1664195,0.14106321,-0.08438921,0.08438921,0.81863046,0.5399365,-1.0611938,-0.08568818,1.0611938,"down","C5orf63",401207.0,"0006810 // transport // inferred from electronic annotation /// 0022900 // electron transport chain // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation","","chr5:126378253-126378735 (-) // 96.98 // q23.2"]
["11722368_a_at",-0.112288475,-0.033442497,-0.16573787,0.30388284,0.033442497,0.25507355,0.29953608,0.030296229,-1.2322451,-0.30128923,1.2322451,"down","TRIM22",10346.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006955 // immune response // traceable author statement /// 0009615 // response to virus // inferred from electronic annotation /// 0009615 // response to virus // traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0070206 // protein trimerization // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0015030 // Cajal body // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003714 // transcription corepressor activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:5710839-5732093 (+) // 76.92 // p15.4"]
["11725403_at",0.18180919,0.13041544,-0.20823598,0.059444666,-0.059444427,-0.06773043,0.88383573,0.6803394,1.0404731,0.05723967,1.0404731,"up","TM4SF18",116441.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr3:149036286-149051548 (-) // 66.05 // q25.1"]
["11762355_at",-0.2526772,-0.022947311,-0.13204622,0.060046673,0.15633202,0.022947073,0.35854292,0.049387343,-1.1612395,-0.21566555,1.1612395,"down","LOC554207",554207.0,"","","","chr14:21576201-21584861 (+) // 83.02 // q11.2"]
["11726591_s_at",0.16569304,0.010662079,-0.048805475,-0.010662079,0.04550004,-0.046652794,0.81861466,0.5395259,1.032724,0.04645477,1.032724,"up","ELOVL4",6785.0,"0006633 // fatty acid biosynthetic process // non-traceable author statement /// 0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0009584 // detection of visible light // non-traceable author statement /// 0019367 // fatty acid elongation, saturated fatty acid // inferred from direct assay /// 0019432 // triglyceride biosynthetic process // traceable author statement /// 0035338 // long-chain fatty-acyl-CoA biosynthetic process // traceable author statement /// 0042761 // very long-chain fatty acid biosynthetic process // inferred from direct assay /// 0042761 // very long-chain fatty acid biosynthetic process // inferred from sequence or structural similarity /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030176 // integral to endoplasmic reticulum membrane // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008020 // G-protein coupled photoreceptor activity // non-traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016747 // transferase activity, transferring acyl groups other than amino-acyl groups // inferred from electronic annotation","chr6:80624530-80657315 (-) // 96.99 // q14.1"]
["11749967_a_at",-0.020773172,-0.02045679,0.15253186,-0.056752443,0.03466463,0.02045679,0.8423847,0.58982587,1.0264364,0.037644304,1.0264364,"up","GABRB2",2561.0,"0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006821 // chloride transport // inferred from electronic annotation /// 0007214 // gamma-aminobutyric acid signaling pathway // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007605 // sensory perception of sound // inferred from electronic annotation /// 0034220 // ion transmembrane transport // traceable author statement /// 0043526 // neuroprotection // inferred from electronic annotation /// 0048666 // neuron development // inferred from electronic annotation /// 0051932 // synaptic transmission, GABAergic // inferred from sequence or structural similarity /// 0055085 // transmembrane transport // traceable author statement /// 0060119 // inner ear receptor cell development // inferred from electronic annotation /// 0060384 // innervation // inferred from electronic annotation /// 0090102 // cochlea development // inferred from electronic annotation","0005624 // membrane fraction // inferred from sequence or structural similarity /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0034707 // chloride channel complex // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004890 // GABA-A receptor activity // inferred from sequence or structural similarity /// 0004890 // GABA-A receptor activity // inferred from electronic annotation /// 0004890 // GABA-A receptor activity // traceable author statement /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005230 // extracellular ligand-gated ion channel activity // inferred from electronic annotation /// 0005237 // inhibitory extracellular ligand-gated ion channel activity // inferred from electronic annotation /// 0005254 // chloride channel activity // inferred from electronic annotation","chr5:160886140-160975401 (-) // 99.4 // q34"]
["11730742_x_at",0.104317665,-0.0016899109,0.08049679,0.0016899109,-0.08583164,-0.041789055,0.3970918,0.06526417,1.0740182,0.10301849,1.0740182,"up","AKIRIN1",79647.0,"","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","","chr1:39456894-39471989 (+) // 87.26 // p34.3"]
["11736201_x_at",-0.22114038,0.06336975,-0.13188457,0.030147552,-0.030147552,0.13992405,0.60380524,0.21643715,-1.1043466,-0.14319308,1.1043466,"down","GLUD2",2747.0,"0006520 // cellular amino acid metabolic process // inferred from electronic annotation /// 0006536 // glutamate metabolic process // inferred from direct assay /// 0006537 // glutamate biosynthetic process // inferred from direct assay /// 0006538 // glutamate catabolic process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0004352 // glutamate dehydrogenase (NAD+) activity // inferred from direct assay /// 0004353 // glutamate dehydrogenase [NAD(P)+] activity // inferred from direct assay /// 0004353 // glutamate dehydrogenase [NAD(P)+] activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from direct assay /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0043531 // ADP binding // inferred from direct assay /// 0070728 // leucine binding // inferred from direct assay","chrX:120181448-120183932 (+) // 97.01 // q24"]
["11717197_x_at",-0.055109024,-0.027608871,0.10873699,0.027608871,0.08360481,-0.0677309,0.9802958,0.93514603,-1.0040431,-0.0058212033,1.0040431,"down","SCFD1",23256.0,"0001666 // response to hypoxia // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006890 // retrograde vesicle-mediated transport, Golgi to ER // inferred from sequence or structural similarity /// 0006890 // retrograde vesicle-mediated transport, Golgi to ER // inferred from electronic annotation /// 0006892 // post-Golgi vesicle-mediated transport // inferred from sequence or structural similarity /// 0006892 // post-Golgi vesicle-mediated transport // inferred from electronic annotation /// 0006904 // vesicle docking involved in exocytosis // inferred from electronic annotation /// 0009636 // response to toxin // inferred from expression pattern /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0060628 // regulation of ER to Golgi vesicle-mediated transport // inferred from sequence or structural similarity /// 0060628 // regulation of ER to Golgi vesicle-mediated transport // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005798 // Golgi-associated vesicle // inferred from sequence or structural similarity /// 0005798 // Golgi-associated vesicle // inferred from electronic annotation /// 0005801 // cis-Golgi network // inferred from direct assay /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0017119 // Golgi transport complex // inferred from sequence or structural similarity /// 0017119 // Golgi transport complex // inferred from electronic annotation /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation","0019905 // syntaxin binding // inferred from sequence or structural similarity /// 0047485 // protein N-terminus binding // inferred from electronic annotation","chr14:31091317-31205005 (+) // 96.66 // q12"]
["11745488_s_at",-0.2107327,0.0,0.06981397,0.10942197,-0.0037453175,0.0,0.75440425,0.42270768,-1.05863,-0.082198426,1.05863,"down","LILRA6 /// LILRB3 /// LOC100291689","100291689 /// 11025 /// 79168","0006952 // defense response // traceable author statement /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0045671 // negative regulation of osteoclast differentiation // inferred from direct assay","0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr19:54720736-54746724 (-) // 97.91 // q13.42"]
["11754099_a_at",0.055491924,-0.02765131,0.09296608,-0.05644369,-0.079277515,0.02765131,0.5747986,0.18894143,1.054305,0.076292224,1.054305,"up","SEC16A",9919.0,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0048208 // COPII vesicle coating // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","","chr9:139335980-139371533 (-) // 99.88 // q34.3"]
["11760767_at",-0.0501194,0.015252352,0.09150767,-0.148628,-0.015252352,0.046082497,0.7739666,0.4561851,1.0411271,0.058146182,1.0411271,"up","ALG9",79796.0,"0006486 // protein glycosylation // inferred from electronic annotation /// 0006488 // dolichol-linked oligosaccharide biosynthetic process // traceable author statement /// 0006506 // GPI anchor biosynthetic process // inferred from electronic annotation /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031227 // intrinsic to endoplasmic reticulum membrane // inferred from electronic annotation","0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0052918 // dol-P-Man:Man(8)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase activity // inferred from electronic annotation /// 0052926 // dol-P-Man:Man(6)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase activity // inferred from electronic annotation","chr11:111657004-111742284 (-) // 94.04 // q23.1"]
["11734942_a_at",-0.020077705,-0.007722378,-0.13078499,0.050262928,0.054592133,0.007721901,0.45368788,0.09710817,-1.064656,-0.09038738,1.064656,"down","FAM212B",55924.0,"","","","chr1:112267931-112282046 (-) // 81.43 // p13.2"]
["11721441_x_at",-0.035609722,-0.17589664,0.03249407,0.08303356,0.120747566,-0.03249407,0.58942705,0.20275433,-1.0843018,-0.1167664,1.0843018,"down","C1orf63",57035.0,"","","","chr1:25568739-25574002 (-) // 95.73 // p36.11"]
["11719123_a_at",0.02122879,0.0059890747,-0.032647133,-0.0059890747,-0.02628994,0.023055077,0.98682815,0.95590174,1.0008771,0.0012648937,1.0008771,"up","TIMELESS",8914.0,"0002009 // morphogenesis of an epithelium // inferred from sequence or structural similarity /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007623 // circadian rhythm // inferred from sequence or structural similarity /// 0007623 // circadian rhythm // traceable author statement /// 0009582 // detection of abiotic stimulus // traceable author statement /// 0009628 // response to abiotic stimulus // traceable author statement /// 0033261 // regulation of S phase // inferred from mutant phenotype /// 0042127 // regulation of cell proliferation // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0048511 // rhythmic process // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0000790 // nuclear chromatin // inferred from direct assay /// 0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr12:56810157-56843191 (-) // 91.81 // q13.3"]
["11720044_at",-0.017575264,-0.021975517,0.052446365,0.021762848,0.017575264,-0.04007721,0.9644985,0.8915485,1.0031552,0.0045448705,1.0031552,"up","SKAP2",8935.0,"0006461 // protein complex assembly // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0042113 // B cell activation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay","0005070 // SH3/SH2 adaptor activity // traceable author statement /// 0005543 // phospholipid binding // inferred from electronic annotation","chr7:26706686-26904385 (-) // 93.27 // p15.2"]
["11749423_a_at",-0.052684307,-0.017973423,0.03613329,0.03537321,0.017973423,-0.028170586,0.83271813,0.568301,-1.0138893,-0.01990016,1.0138893,"down","LIG1",3978.0,"0000084 // S phase of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0000722 // telomere maintenance via recombination // traceable author statement /// 0000723 // telomere maintenance // traceable author statement /// 0000724 // double-strand break repair via homologous recombination // traceable author statement /// 0006259 // DNA metabolic process // traceable author statement /// 0006260 // DNA replication // inferred from electronic annotation /// 0006266 // DNA ligation // inferred from direct assay /// 0006266 // DNA ligation // inferred from electronic annotation /// 0006271 // DNA strand elongation involved in DNA replication // traceable author statement /// 0006273 // lagging strand elongation // not recorded /// 0006281 // DNA repair // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006283 // transcription-coupled nucleotide-excision repair // traceable author statement /// 0006284 // base-excision repair // traceable author statement /// 0006289 // nucleotide-excision repair // not recorded /// 0006289 // nucleotide-excision repair // traceable author statement /// 0006297 // nucleotide-excision repair, DNA gap filling // traceable author statement /// 0006302 // double-strand break repair // traceable author statement /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0032201 // telomere maintenance via semi-conservative replication // traceable author statement /// 0033151 // V(D)J recombination // inferred from direct assay /// 0051103 // DNA ligation involved in DNA repair // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0005634 // nucleus // not recorded /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // not recorded /// 0005739 // mitochondrion // not recorded","0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0003909 // DNA ligase activity // inferred from direct assay /// 0003909 // DNA ligase activity // inferred from electronic annotation /// 0003910 // DNA ligase (ATP) activity // not recorded /// 0003910 // DNA ligase (ATP) activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:48618724-48657356 (-) // 97.64 // q13.33"]
["11727815_at",-0.03756666,0.10653639,0.06768036,-0.13368511,-0.13603115,0.03756666,0.54596543,0.1620772,1.0889466,0.12293318,1.0889466,"up","UBASH3B",84959.0,"0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr11:122525899-122685185 (+) // 97.6 // q24.1"]
["11742827_a_at",-0.121920586,-0.040217876,0.040217876,0.26726437,-0.09113884,0.17847109,0.6296371,0.24777581,-1.1163884,-0.15883909,1.1163884,"down","PHF3",23469.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // non-traceable author statement","0005634 // nucleus // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:64356430-64424691 (+) // 98.28 // q12"]
["11759374_at",-0.10851145,0.10553217,-0.17647791,-0.06134844,0.06134844,0.21591377,0.6876009,0.32246077,-1.0956525,-0.13179025,1.0956525,"down","HIST1H3A /// HIST1H3B /// HIST1H3C /// HIST1H3D /// HIST1H3E /// HIST1H3F /// HIST1H3G /// HIST1H3H /// HIST1H3I /// HIST1H3J","8350 /// 8351 /// 8352 /// 8353 /// 8354 /// 8355 /// 8356 /// 8357 /// 8358 /// 8968","0006334 // nucleosome assembly // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0051320 // S phase // non-traceable author statement /// 0060968 // regulation of gene silencing // inferred from direct assay","0000786 // nucleosome // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr6:26271202-26272043 (-) // 83.41 // p22.2"]
["11744862_x_at",-0.005821705,-0.0056405067,0.20344543,-0.008702755,0.0056405067,0.012700081,0.7607859,0.43427235,1.0430309,0.06078184,1.0430309,"up","DHRS7",51635.0,"0008152 // metabolic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","","0000166 // nucleotide binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation","chr14:60611496-60636581 (-) // 85.48 // q23.1"]
["11740847_a_at",-0.004694462,0.004694462,-0.05555415,0.0997684,-0.11179757,0.13198829,0.79707533,0.49862662,-1.0413857,-0.058504432,1.0413857,"down","ZNF229",7772.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:44930425-44952626 (-) // 79.99 // q13.31"]
["11760698_at",0.24236774,0.022049189,-0.14519262,-0.036412716,0.026323557,-0.02204895,0.88384485,0.68048626,1.0355909,0.050454173,1.0355909,"up","AGBL2",79841.0,"0006508 // proteolysis // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // inferred from electronic annotation","0004180 // carboxypeptidase activity // inferred from electronic annotation /// 0004181 // metallocarboxypeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:47688167-47736921 (-) // 97.6 // p11.2"]
["11751699_a_at",-0.03805685,0.033835888,0.03472948,0.045414448,-0.09433365,-0.033835888,0.7812532,0.46773967,1.0265149,0.03775455,1.0265149,"up","USP3",9960.0,"0000278 // mitotic cell cycle // inferred from mutant phenotype /// 0006281 // DNA repair // inferred from mutant phenotype /// 0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0016578 // histone deubiquitination // inferred from direct assay /// 0031647 // regulation of protein stability // inferred from direct assay","0000790 // nuclear chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0004221 // ubiquitin thiolesterase activity // inferred from electronic annotation /// 0004221 // ubiquitin thiolesterase activity // inferred from mutant phenotype /// 0004843 // ubiquitin-specific protease activity // traceable author statement /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042393 // histone binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr15:63796854-63866580 (+) // 100.0 // q22.31"]
["11758302_x_at",-0.25523853,-0.031393528,-0.08570862,0.068888664,0.03139305,0.174891,0.3699579,0.054097045,-1.1613781,-0.21583779,1.1613781,"down","LOC100128326 /// LOC100132050 /// LOC100132062 /// LOC100133161 /// LOC100508632 /// LOC100652945 /// LOC100653241 /// LOC100653346 /// LOC729737","100128326 /// 100132050 /// 100132062 /// 100133161 /// 100508632 /// 100652945 /// 100653241 /// 100653346 /// 729737","","","","chr1:324237-325595 (+) // 87.68 // p36.33 /// chr1:228155040-228156398 (+) // 86.46 // q42.13 /// chr5:180750852-180752210 (+) // 87.83 // q35.3 /// chr1:664027-665385 (-) // 88.06 // p36.33 /// chr1:138539-139897 (-) // 87.53 // p36.33 /// chr1:243219415-243220773 (-) // 86.84 // q43 /// chr1:222649338-222650696 (-) // 86.24 // q41 /// chr11:130216-131574 (-) // 87.6 // p15.5"]
["11736855_a_at",0.012186527,-0.012186527,0.012186527,-0.0154418945,0.09861708,-0.06213665,0.9863795,0.9543412,-1.0020473,-0.0029506106,1.0020473,"down","ATP6V1C2",245973.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0015991 // ATP hydrolysis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport // inferred from electronic annotation /// 0033572 // transferrin transport // traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0005829 // cytosol // traceable author statement /// 0033180 // proton-transporting V-type ATPase, V1 domain // inferred from electronic annotation","0008553 // hydrogen-exporting ATPase activity, phosphorylative mechanism // inferred from electronic annotation /// 0016820 // hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances // inferred from electronic annotation","chr2:10862948-10925228 (+) // 96.44 // p25.1"]
["11730628_a_at",0.03174305,-0.080543995,0.099737644,-0.099766254,0.12498188,-0.03174305,0.94479406,0.83236367,1.0133655,0.019154629,1.0133655,"up","SPHKAP",80309.0,"0016310 // phosphorylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0016301 // kinase activity // inferred from electronic annotation /// 0051018 // protein kinase A binding // inferred from direct assay","chr2:228844670-229046836 (-) // 99.1 // q36.3"]
["11761837_at",-0.022765398,-0.06911445,-0.27973366,0.11283803,0.22973514,0.022765398,0.40343848,0.06849347,-1.1856273,-0.24565062,1.1856273,"down","RALGPS1",9649.0,"0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0035556 // intracellular signal transduction // non-traceable author statement","0005622 // intracellular // non-traceable author statement /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005085 // guanyl-nucleotide exchange factor activity // non-traceable author statement /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation","chr9:129677070-129946599 (+) // 79.44 // q33.3"]
["11743414_a_at",0.06191826,0.03429985,-0.03429985,-0.075974464,0.05687189,-0.077638626,0.7226881,0.3744332,1.0373383,0.052886408,1.0373383,"up","UBE2K",3093.0,"0006511 // ubiquitin-dependent protein catabolic process // traceable author statement /// 0016567 // protein ubiquitination // traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0070936 // protein K48-linked ubiquitination // inferred from direct assay","0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0004842 // ubiquitin-protein ligase activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0034450 // ubiquitin-ubiquitin ligase activity // inferred from direct assay","chr4:39699660-39784408 (+) // 97.23 // p14"]
["11754875_a_at",0.09800434,-0.08349657,-0.08929157,-0.049823046,0.069345236,0.049822807,0.81861466,0.5395849,-1.0338615,-0.048042953,1.0338615,"down","C20orf96",140680.0,"","","","chr20:251505-266152 (-) // 77.51 // p13"]
["11720763_a_at",-0.04606676,0.04606676,-0.21384859,0.09326935,-0.13084078,0.17346573,0.7267884,0.38149855,-1.0841625,-0.11658098,1.0841625,"down","SELPLG",6404.0,"0007155 // cell adhesion // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0050900 // leukocyte migration // traceable author statement /// 0050901 // leukocyte tethering or rolling // inferred from electronic annotation /// 0050902 // leukocyte adhesive activation // inferred from sequence or structural similarity /// 0071354 // cellular response to interleukin-6 // inferred from direct assay","0005624 // membrane fraction // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0005102 // receptor binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0030246 // carbohydrate binding // inferred from electronic annotation /// 0051635 // bacterial cell surface binding // traceable author statement","chr12:109015682-109027735 (-) // 96.56 // q24.11"]
["11724919_a_at",-0.05359888,0.014027119,-0.073859215,0.011485577,-0.011485577,0.13208771,0.5755847,0.18962425,-1.0583667,-0.08183952,1.0583667,"down","HSD17B8",7923.0,"0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0006694 // steroid biosynthetic process // inferred from electronic annotation /// 0006703 // estrogen biosynthetic process // inferred from direct assay /// 0006703 // estrogen biosynthetic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008209 // androgen metabolic process // inferred from electronic annotation /// 0008210 // estrogen metabolic process // inferred from electronic annotation /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005624 // membrane fraction // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005740 // mitochondrial envelope // inferred from electronic annotation /// 0005759 // mitochondrial matrix // inferred from direct assay /// 0005759 // mitochondrial matrix // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003857 // 3-hydroxyacyl-CoA dehydrogenase activity // inferred from direct assay /// 0004303 // estradiol 17-beta-dehydrogenase activity // inferred from direct assay /// 0004303 // estradiol 17-beta-dehydrogenase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0050327 // testosterone 17-beta-dehydrogenase (NAD+) activity // inferred from electronic annotation","chr6:33172472-33174607 (+) // 91.31 // p21.32"]
["11743555_a_at",0.030508518,0.01540041,0.03679371,-0.099713326,-0.015399933,-0.023471355,0.37457132,0.05566076,1.0524578,0.0737624,1.0524578,"up","QTRTD1",79691.0,"0006400 // tRNA modification // inferred from electronic annotation /// 0008033 // tRNA processing // inferred from electronic annotation /// 0008616 // queuosine biosynthetic process // inferred from electronic annotation /// 0008616 // queuosine biosynthetic process // inferred from sequence or structural similarity","0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005739 // mitochondrion // inferred from electronic annotation","0008479 // queuine tRNA-ribosyltransferase activity // inferred from sequence or structural similarity /// 0008479 // queuine tRNA-ribosyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:113775583-113807379 (+) // 78.74 // q13.31"]
["11726603_at",0.09471321,0.05695057,0.12840557,-0.13646698,-0.12792301,-0.05695057,0.13647185,0.0035371096,1.1490726,0.20047002,1.1490726,"up","DARS2",55157.0,"0006412 // translation // inferred from electronic annotation /// 0006418 // tRNA aminoacylation for protein translation // inferred from electronic annotation /// 0006418 // tRNA aminoacylation for protein translation // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0043039 // tRNA aminoacylation // inferred from direct assay /// 0070145 // mitochondrial asparaginyl-tRNA aminoacylation // inferred by curator","0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred by curator /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement /// 0005759 // mitochondrial matrix // inferred from electronic annotation","0000049 // tRNA binding // traceable author statement /// 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0004812 // aminoacyl-tRNA ligase activity // inferred from electronic annotation /// 0004815 // aspartate-tRNA ligase activity // traceable author statement /// 0004815 // aspartate-tRNA ligase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005524 // ATP binding // traceable author statement /// 0016874 // ligase activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0050560 // aspartate-tRNA(Asn) ligase activity // inferred from direct assay","chr1:173793599-173828000 (+) // 87.41 // q25.1"]
["11737424_at",2.3055077E-4,0.21164441,-0.15216088,-0.027491808,-2.3031235E-4,0.026649237,0.9534361,0.8585474,1.0141438,0.020262267,1.0141438,"up","MS4A2",2206.0,"0006954 // inflammatory response // inferred from electronic annotation /// 0006959 // humoral immune response // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007202 // activation of phospholipase C activity // inferred from electronic annotation /// 0007205 // protein kinase C-activating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0038095 // Fc-epsilon receptor signaling pathway // inferred from electronic annotation /// 0043306 // positive regulation of mast cell degranulation // inferred from electronic annotation /// 0050663 // cytokine secretion // inferred from electronic annotation /// 0051279 // regulation of release of sequestered calcium ion into cytosol // inferred from electronic annotation /// 0070588 // calcium ion transmembrane transport // traceable author statement","0005768 // endosome // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0032998 // Fc-epsilon receptor I complex // inferred from electronic annotation /// 0045121 // membrane raft // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005262 // calcium channel activity // traceable author statement /// 0019767 // IgE receptor activity // inferred from electronic annotation /// 0019863 // IgE binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0042169 // SH2 domain binding // inferred from electronic annotation /// 0051219 // phosphoprotein binding // inferred from electronic annotation","chr11:59856136-59866017 (+) // 91.6 // q12.1"]
["11731481_a_at",-0.009759903,0.05363369,0.0039424896,-0.0039424896,-0.01826477,0.030453682,0.8535017,0.6129937,1.0091845,0.013189924,1.0091845,"up","STK25",10494.0,"0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006979 // response to oxidative stress // traceable author statement /// 0007163 // establishment or maintenance of cell polarity // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0050772 // positive regulation of axonogenesis // inferred from electronic annotation /// 0051645 // Golgi localization // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:242434432-242448103 (-) // 95.41 // q37.3"]
["11751181_a_at",0.123939276,0.025117636,-0.11345959,-0.025117874,0.06913066,-0.08707237,0.9206134,0.76647276,1.0183398,0.026218975,1.0183398,"up","ZNF763",284390.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:12075868-12090295 (+) // 100.0 // p13.2"]
["11727505_at",0.025699615,0.020296097,-0.0067920685,0.0067920685,-0.03767872,-0.050424576,0.4852227,0.115579695,1.0282362,0.040171638,1.0282362,"up","RAB21",23011.0,"0006184 // GTP catabolic process // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from electronic annotation /// 0032154 // cleavage furrow // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from direct assay /// 0005525 // GTP binding // inferred from electronic annotation /// 0019003 // GDP binding // inferred from direct assay","chr12:72148646-72182536 (+) // 86.61 // q21.1"]
["11733027_at",-0.006878853,-0.017047882,-0.013649702,0.006878853,0.006878853,0.1392572,0.61021966,0.22422491,-1.0450199,-0.06353036,1.0450199,"down","CLCA2",9635.0,"0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006821 // chloride transport // traceable author statement /// 0006821 // chloride transport // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0009925 // basal plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","0005254 // chloride channel activity // inferred from electronic annotation /// 0005254 // chloride channel activity // traceable author statement /// 0015276 // ligand-gated ion channel activity // inferred from electronic annotation","chr1:86889565-86922236 (+) // 98.27 // p22.3"]
["11755764_a_at",0.0044043064,-0.1033442,-0.0044043064,0.07562709,0.12306261,-0.05590892,0.6449347,0.2672833,-1.058515,-0.08204165,1.058515,"down","PKD1L2",114780.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0007218 // neuropeptide signaling pathway // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr16:81134484-81147586 (-) // 57.89 // q23.2"]
["11733024_x_at",-0.029240608,-0.056274414,0.021917343,0.018911362,-0.014005661,0.014005661,0.69691825,0.3350008,-1.0192465,-0.027502945,1.0192465,"down","BTG1",694.0,"0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006479 // protein methylation // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0016477 // cell migration // non-traceable author statement /// 0030308 // negative regulation of cell growth // non-traceable author statement /// 0042981 // regulation of apoptotic process // inferred from mutant phenotype /// 0043434 // response to peptide hormone stimulus // inferred from electronic annotation /// 0045603 // positive regulation of endothelial cell differentiation // inferred from mutant phenotype /// 0045663 // positive regulation of myoblast differentiation // inferred from direct assay /// 0045663 // positive regulation of myoblast differentiation // non-traceable author statement /// 0045766 // positive regulation of angiogenesis // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from mutant phenotype /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from mutant phenotype","0003712 // transcription cofactor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0019900 // kinase binding // non-traceable author statement","chr12:92534055-92539673 (-) // 97.05 // q21.33"]
["11731810_x_at",-0.06043911,0.01543951,0.09264326,-0.01543951,-0.054714203,0.11583662,0.9977106,0.9927821,1.0004531,6.53558E-4,1.0004531,"up","FCRL4",83417.0,"","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr1:157543538-157567870 (-) // 71.26 // q23.1"]
["11729017_a_at",0.009205341,-0.051551342,0.11500645,-0.009205341,0.14423275,-0.12322378,0.9457274,0.8354069,1.0141603,0.02028567,1.0141603,"up","SYT2",127833.0,"0006810 // transport // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007269 // neurotransmitter secretion // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030666 // endocytic vesicle membrane // traceable author statement /// 0030672 // synaptic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0042584 // chromaffin granule membrane // inferred from electronic annotation /// 0042598 // vesicular fraction // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0045202 // synapse // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005544 // calcium-dependent phospholipid binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:202559723-202612581 (-) // 94.16 // q32.1"]
["11726937_at",0.019680023,-0.21616435,0.14365077,0.10671568,-0.027843237,-0.019680023,0.9175017,0.7600032,-1.0262214,-0.03734201,1.0262214,"down","ST18",9705.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:53023397-53322439 (-) // 97.27 // q11.23"]
["11762104_at",0.0018165112,-0.052939415,-0.03142786,-0.0018162727,0.13606358,0.20217037,0.43784565,0.08797688,-1.1016425,-0.13965611,1.1016425,"down","MOCS1",4337.0,"0006766 // vitamin metabolic process // traceable author statement /// 0006767 // water-soluble vitamin metabolic process // traceable author statement /// 0006777 // Mo-molybdopterin cofactor biosynthetic process // inferred from direct assay /// 0006777 // Mo-molybdopterin cofactor biosynthetic process // inferred from mutant phenotype /// 0006777 // Mo-molybdopterin cofactor biosynthetic process // traceable author statement /// 0006777 // Mo-molybdopterin cofactor biosynthetic process // inferred from electronic annotation /// 0032324 // molybdopterin cofactor biosynthetic process // traceable author statement /// 0032324 // molybdopterin cofactor biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement","0005634 // nucleus // non-traceable author statement /// 0005829 // cytosol // traceable author statement /// 0019008 // molybdopterin synthase complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation /// 0051539 // 4 iron, 4 sulfur cluster binding // inferred from direct assay /// 0051539 // 4 iron, 4 sulfur cluster binding // inferred from electronic annotation","chr6:39867355-39900171 (-) // 85.37 // p21.2"]
["11716520_at",0.036922455,-0.028155327,0.22222614,-0.3007052,-0.029360771,0.028155327,0.6167138,0.23179589,1.1310279,0.17763457,1.1310279,"up","C10orf10",11067.0,"","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation","","chr10:45471576-45474360 (-) // 91.47 // q11.21"]
["11754177_a_at",-0.056354523,-0.12069154,-0.09100771,0.0742569,0.056354523,0.26933408,0.31440505,0.034523007,-1.1668882,-0.22266638,1.1668882,"down","RRM2B",50484.0,"0001822 // kidney development // inferred from electronic annotation /// 0003014 // renal system process // inferred from electronic annotation /// 0006260 // DNA replication // inferred from electronic annotation /// 0006264 // mitochondrial DNA replication // inferred from electronic annotation /// 0006281 // DNA repair // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0009186 // deoxyribonucleoside diphosphate metabolic process // inferred from electronic annotation /// 0009200 // deoxyribonucleoside triphosphate metabolic process // inferred from electronic annotation /// 0009263 // deoxyribonucleotide biosynthetic process // inferred from electronic annotation /// 0015949 // nucleobase-containing small molecule interconversion // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation","0004748 // ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046914 // transition metal ion binding // inferred from electronic annotation","chr8:103220252-103226457 (-) // 99.64 // q22.3"]
["11740563_at",-0.19678688,-0.03924179,-0.25571966,0.173944,0.03924179,0.05997801,0.29712468,0.029616939,-1.1933115,-0.25497064,1.1933115,"down","EVPLL",645027.0,"","","","chr17:18281078-18292961 (+) // 96.03 // p11.2"]
["11751605_a_at",-0.06401634,0.05206299,-0.06401634,0.017660141,-0.017660141,0.046116114,0.73714924,0.39618692,-1.0286094,-0.040695235,1.0286094,"down","SP140",11262.0,"0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006952 // defense response // traceable author statement","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:231090443-231176192 (+) // 99.81 // q37.1"]
["11723650_a_at",0.07166958,0.02519703,0.18706703,-0.059448242,-0.026721954,-0.02519703,0.37540087,0.055957075,1.0956348,0.13176702,1.0956348,"up","CIAO1",9391.0,"0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0007059 // chromosome segregation // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0016226 // iron-sulfur cluster assembly // inferred from genetic interaction","0071817 // MMXD complex // inferred from direct assay","","chr2:96931869-96938583 (+) // 50.59 // q11.2"]
["11740026_at",-0.02742672,0.027845383,-0.01918888,0.01918912,-0.035982132,0.027987003,0.90212387,0.7244358,-1.0069473,-0.00998815,1.0069473,"down","LOC200726",200726.0,"","","","chr2:207507141-207514173 (+) // 94.34 // q33.3"]
["11727672_a_at",-0.14880753,0.016822815,-0.016822815,0.096930504,0.043270588,-0.29842758,0.99469525,0.9823945,1.0021787,0.003139736,1.0021787,"up","MICAL2",9645.0,"0008152 // metabolic process // inferred from electronic annotation /// 0030042 // actin filament depolymerization // inferred from sequence or structural similarity /// 0055114 // oxidation-reduction process // inferred from sequence or structural similarity /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation","0003779 // actin binding // inferred from sequence or structural similarity /// 0003779 // actin binding // inferred from electronic annotation /// 0004497 // monooxygenase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016709 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation /// 0071949 // FAD binding // inferred from sequence or structural similarity","chr11:12132122-12285332 (+) // 97.72 // p15.3"]
["11748407_x_at",0.013180733,-0.004866123,0.07481289,0.0048656464,-0.048570633,-0.071320534,0.48594528,0.11623789,1.0468473,0.06605107,1.0468473,"up","SCAF8",22828.0,"0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0016363 // nuclear matrix // inferred from sequence or structural similarity /// 0016363 // nuclear matrix // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0043175 // RNA polymerase core enzyme binding // inferred from physical interaction /// 0070063 // RNA polymerase binding // inferred from electronic annotation","chr6:155054549-155155131 (+) // 98.89 // q25.2"]
["11759341_at",-0.23962641,0.05740285,-0.057403088,0.08018112,-0.099659204,0.13354897,0.70741326,0.35035297,-1.0851536,-0.11789924,1.0851536,"down","RGR",5995.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007601 // visual perception // inferred from electronic annotation /// 0007601 // visual perception // traceable author statement /// 0007602 // phototransduction // inferred from electronic annotation /// 0018298 // protein-chromophore linkage // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation","0005887 // integral to plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0009881 // photoreceptor activity // inferred from electronic annotation","chr10:86004808-86019123 (+) // 51.19 // q23.1"]
["11733473_at",0.012258053,0.027653694,0.1673255,-0.012258053,-0.051735878,-0.11388683,0.44064343,0.089408405,1.09306,0.12837261,1.09306,"up","ANKRD24",170961.0,"","","","chr19:4186268-4224811 (+) // 91.23 // p13.3"]
["11744767_x_at",0.003215313,0.017913342,-0.00344038,-0.0032157898,-0.11791515,0.0086631775,0.70646757,0.34806347,1.0305291,0.0433853,1.0305291,"up","BCKDK",10295.0,"0000160 // two-component signal transduction system (phosphorelay) // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0009063 // cellular amino acid catabolic process // non-traceable author statement /// 0009083 // branched chain family amino acid catabolic process // inferred from sequence or structural similarity /// 0009083 // branched chain family amino acid catabolic process // traceable author statement /// 0009083 // branched chain family amino acid catabolic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from sequence or structural similarity /// 0016310 // phosphorylation // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018106 // peptidyl-histidine phosphorylation // inferred from electronic annotation /// 0023014 // signal transduction by phosphorylation // inferred from electronic annotation","0005739 // mitochondrion // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // inferred from electronic annotation /// 0005947 // mitochondrial alpha-ketoglutarate dehydrogenase complex // inferred from sequence or structural similarity /// 0005947 // mitochondrial alpha-ketoglutarate dehydrogenase complex // traceable author statement /// 0005947 // mitochondrial alpha-ketoglutarate dehydrogenase complex // inferred from electronic annotation","0000155 // two-component sensor activity // inferred from electronic annotation /// 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004673 // protein histidine kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from sequence or structural similarity /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from sequence or structural similarity /// 0016301 // kinase activity // inferred from electronic annotation /// 0016301 // kinase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0047323 // [3-methyl-2-oxobutanoate dehydrogenase (acetyl-transferring)] kinase activity // inferred from electronic annotation","chr16:31119751-31123887 (+) // 95.46 // p11.2"]
["11755677_a_at",-0.03948617,0.029466867,0.009312391,-0.06709504,-0.009312391,0.10940933,0.9504756,0.85034746,-1.0078188,-0.0112363,1.0078188,"down","ZNF257",113835.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:22235265-22272721 (+) // 99.51 // p12"]
["11726086_x_at",-7.991791E-4,0.0055942535,0.1625967,-0.0859375,7.991791E-4,-0.036104202,0.5634622,0.17855859,1.0689627,0.0962115,1.0689627,"up","C12orf65",91574.0,"0006412 // translation // inferred from electronic annotation /// 0006415 // translational termination // inferred from electronic annotation","0005739 // mitochondrion // non-traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation","0003747 // translation release factor activity // inferred from electronic annotation","chr12:123717463-123742272 (+) // 62.44 // q24.31"]
["11726124_at",-0.07562685,-0.010693073,-0.6567495,0.2175641,0.010693073,0.13828278,0.54314613,0.1590531,-1.2922362,-0.3698698,1.2922362,"down","TCN1",6947.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006824 // cobalt ion transport // inferred from electronic annotation /// 0009235 // cobalamin metabolic process // not recorded /// 0015889 // cobalamin transport // inferred from electronic annotation /// 0015889 // cobalamin transport // traceable author statement","0005576 // extracellular region // inferred from electronic annotation","0031419 // cobalamin binding // not recorded /// 0031419 // cobalamin binding // inferred from electronic annotation","chr11:59620274-59634048 (-) // 98.57 // q12.1"]
["11732208_at",-0.017954826,-0.07611847,0.017955303,-0.102627754,0.08474302,0.23612213,0.7322786,0.3894321,-1.0703766,-0.09811853,1.0703766,"down","MON2",23041.0,"0006810 // transport // inferred from electronic annotation /// 0006895 // Golgi to endosome transport // inferred from sequence or structural similarity /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // not recorded /// 0030036 // actin cytoskeleton organization // not recorded","0005802 // trans-Golgi network // not recorded","0005086 // ARF guanyl-nucleotide exchange factor activity // not recorded","chr12:62860586-62991448 (+) // 96.88 // q14.1"]
["11758506_s_at",-0.07014561,-0.1232996,0.08710003,0.026846886,0.09134579,-0.026846886,0.7461879,0.41075024,-1.0467355,-0.065896966,1.0467355,"down","RNF13",11342.0,"0016567 // protein ubiquitination // inferred from electronic annotation /// 0051865 // protein autoubiquitination // inferred from sequence or structural similarity /// 0051865 // protein autoubiquitination // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005637 // nuclear inner membrane // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from sequence or structural similarity /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031902 // late endosome membrane // inferred from sequence or structural similarity /// 0031902 // late endosome membrane // inferred from electronic annotation","0004842 // ubiquitin-protein ligase activity // inferred from sequence or structural similarity /// 0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:149679401-149679913 (+) // 97.35 // q25.1 /// chr7:83100201-83100717 (-) // 96.47 // q21.11"]
["11754353_x_at",0.035933495,0.025551796,-0.025551558,0.06665945,-0.05865097,-0.06690407,0.81862736,0.5397659,1.0221521,0.03160984,1.0221521,"up","RNF213",57674.0,"0006200 // ATP catabolic process // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0051865 // protein autoubiquitination // inferred from direct assay","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from direct assay /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:78360185-78370085 (+) // 92.69 // q25.3"]
["11719454_a_at",-0.2436037,-0.030225754,-0.23791075,0.030225754,0.08089161,0.23923302,0.32750538,0.038111165,-1.220408,-0.2873635,1.220408,"down","BBS1",582.0,"0001895 // retina homeostasis // inferred from mutant phenotype /// 0007601 // visual perception // inferred from electronic annotation /// 0035058 // nonmotile primary cilium assembly // inferred from mutant phenotype /// 0042384 // cilium assembly // inferred from mutant phenotype /// 0043001 // Golgi to plasma membrane protein transport // inferred from mutant phenotype /// 0045494 // photoreceptor cell maintenance // inferred from mutant phenotype /// 0050896 // response to stimulus // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0034464 // BBSome // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation /// 0060170 // cilium membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr11:66278079-66301069 (+) // 89.88 // q13.2"]
["11716621_a_at",0.05542946,0.0966301,0.027661324,-0.061585426,-0.09007454,-0.027661324,0.20674692,0.011340986,1.0864943,0.11968064,1.0864943,"up","TNPO1",3842.0,"0000060 // protein import into nucleus, translocation // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0005515 // protein binding // inferred from physical interaction /// 0008139 // nuclear localization sequence binding // traceable author statement /// 0008565 // protein transporter activity // inferred from electronic annotation","chr5:72112414-72210215 (+) // 90.72 // q13.2"]
["11751618_x_at",-0.018152237,0.018152237,-0.074300766,0.11441898,-0.116965294,0.18626404,0.7511974,0.41808084,-1.0614277,-0.08600612,1.0614277,"down","HLA-E",3133.0,"0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // inferred from electronic annotation /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0002480 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-independent // traceable author statement /// 0006955 // immune response // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0019882 // antigen processing and presentation // inferred from electronic annotation /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0050776 // regulation of immune response // traceable author statement /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060337 // type I interferon-mediated signaling pathway // traceable author statement","0000139 // Golgi membrane // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0012507 // ER to Golgi transport vesicle membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030670 // phagocytic vesicle membrane // traceable author statement /// 0031901 // early endosome membrane // traceable author statement /// 0042612 // MHC class I protein complex // inferred from electronic annotation /// 0071556 // integral to lumenal side of endoplasmic reticulum membrane // traceable author statement","0032393 // MHC class I receptor activity // traceable author statement","chr6:30457288-30460679 (+) // 99.9 // p21.33"]
["11731722_a_at",-0.053567886,-0.11111736,-0.15555477,0.08818436,0.053567886,0.15206909,0.179878,0.0077131153,-1.1524364,-0.2046871,1.1524364,"down","ALDH3B1",221.0,"0006066 // alcohol metabolic process // traceable author statement /// 0006068 // ethanol catabolic process // inferred from electronic annotation /// 0006081 // cellular aldehyde metabolic process // inferred from electronic annotation /// 0006629 // lipid metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0034599 // cellular response to oxidative stress // inferred from direct assay /// 0046185 // aldehyde catabolic process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay","0004028 // 3-chloroallyl aldehyde dehydrogenase activity // traceable author statement /// 0004030 // aldehyde dehydrogenase [NAD(P)+] activity // inferred from direct assay /// 0004030 // aldehyde dehydrogenase [NAD(P)+] activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016620 // oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor // inferred from electronic annotation","chr11:67776016-67796741 (+) // 75.63 // q13.2"]
["11746595_a_at",0.026844025,-0.081459045,0.12665558,-0.016998291,0.016998291,-0.06623459,0.80685294,0.5159969,1.0324641,0.046091683,1.0324641,"up","PCM1",5108.0,"0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000165 // MAPK cascade // inferred from electronic annotation /// 0000278 // mitotic cell cycle // traceable author statement /// 0001657 // ureteric bud development // inferred from electronic annotation /// 0001755 // neural crest cell migration // inferred from electronic annotation /// 0001838 // embryonic epithelial tube formation // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from electronic annotation /// 0007158 // neuron cell-cell adhesion // inferred from electronic annotation /// 0007158 // neuron cell-cell adhesion // inferred from mutant phenotype /// 0007165 // signal transduction // traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0007497 // posterior midgut development // traceable author statement /// 0010976 // positive regulation of neuron projection development // inferred from mutant phenotype /// 0016310 // phosphorylation // inferred from electronic annotation /// 0022027 // interkinetic nuclear migration // inferred from sequence or structural similarity /// 0022027 // interkinetic nuclear migration // inferred from electronic annotation /// 0030030 // cell projection organization // inferred from electronic annotation /// 0030155 // regulation of cell adhesion // inferred from direct assay /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0033619 // membrane protein proteolysis // inferred from direct assay /// 0033630 // positive regulation of cell adhesion mediated by integrin // inferred from direct assay /// 0034453 // microtubule anchoring // inferred from sequence or structural similarity /// 0034453 // microtubule anchoring // inferred from electronic annotation /// 0034454 // microtubule anchoring at centrosome // inferred from electronic annotation /// 0035799 // ureter maturation // inferred from electronic annotation /// 0042384 // cilium assembly // inferred from mutant phenotype /// 0042551 // neuron maturation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0048265 // response to pain // inferred from electronic annotation /// 0048265 // response to pain // inferred from sequence or structural similarity /// 0048484 // enteric nervous system development // inferred from electronic annotation /// 0050768 // negative regulation of neurogenesis // inferred from sequence or structural similarity /// 0050768 // negative regulation of neurogenesis // inferred from electronic annotation /// 0051297 // centrosome organization // inferred from mutant phenotype /// 0061146 // Peyer's patch morphogenesis // inferred from electronic annotation /// 0061146 // Peyer's patch morphogenesis // inferred from sequence or structural similarity /// 0071300 // cellular response to retinoic acid // inferred from mutant phenotype /// 0071539 // protein localization to centrosome // inferred from sequence or structural similarity /// 0071539 // protein localization to centrosome // inferred from electronic annotation /// 0072300 // positive regulation of metanephric glomerulus development // inferred from electronic annotation /// 0072300 // positive regulation of metanephric glomerulus development // inferred from sequence or structural similarity /// 0097021 // lymphocyte migration into lymphoid organs // inferred from sequence or structural similarity /// 0097150 // neuronal stem cell maintenance // inferred from electronic annotation /// 2001241 // positive regulation of extrinsic apoptotic signaling pathway in absence of ligand // inferred from mutant phenotype /// 2001241 // positive regulation of extrinsic apoptotic signaling pathway in absence of ligand // traceable author statement","0000242 // pericentriolar material // inferred from sequence or structural similarity /// 0000242 // pericentriolar material // inferred from electronic annotation /// 0000242 // pericentriolar material // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005768 // endosome // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005813 // centrosome // inferred from sequence or structural similarity /// 0005813 // centrosome // inferred from electronic annotation /// 0005813 // centrosome // traceable author statement /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0010008 // endosome membrane // inferred from direct assay /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031513 // nonmotile primary cilium // inferred from direct assay /// 0031965 // nuclear membrane // inferred from direct assay /// 0034451 // centriolar satellite // inferred from direct assay /// 0034451 // centriolar satellite // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // traceable author statement /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from sequence or structural similarity","chr8:17827083-17885371 (+) // 98.01 // p22"]
["11749459_a_at",0.0016942024,0.10297918,-0.17929888,-0.0016942024,-0.061840534,0.1791482,0.84482485,0.5946014,-1.0449349,-0.063413024,1.0449349,"down","RAP1GAP2",23108.0,"0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005096 // GTPase activator activity // inferred from electronic annotation","chr17:2699775-2939669 (+) // 97.6 // p13.3"]
["11750929_a_at",0.018045425,-0.20461607,-0.11880922,0.18526745,0.31223106,-0.018045425,0.43653503,0.08713583,-1.1988167,-0.26161104,1.1988167,"down","FRS2",10818.0,"0000186 // activation of MAPKK activity // traceable author statement /// 0000187 // activation of MAPK activity // inferred from electronic annotation /// 0001702 // gastrulation with mouth forming second // inferred from electronic annotation /// 0001759 // organ induction // inferred from electronic annotation /// 0003281 // ventricular septum development // inferred from electronic annotation /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0007185 // transmembrane receptor protein tyrosine phosphatase signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007405 // neuroblast proliferation // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from genetic interaction /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from electronic annotation /// 0008595 // anterior/posterior axis specification, embryo // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation /// 0046619 // optic placode formation involved in camera-type eye formation // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0050678 // regulation of epithelial cell proliferation // inferred from electronic annotation /// 0060527 // prostate epithelial cord arborization involved in prostate glandular acinus morphogenesis // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005068 // transmembrane receptor protein tyrosine kinase adaptor activity // traceable author statement /// 0005068 // transmembrane receptor protein tyrosine kinase adaptor activity // inferred from electronic annotation /// 0005104 // fibroblast growth factor receptor binding // inferred from physical interaction /// 0005158 // insulin receptor binding // inferred from electronic annotation /// 0005168 // neurotrophin TRKA receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0019211 // phosphatase activator activity // traceable author statement","chr12:69864185-69968744 (+) // 95.68 // q15"]
["11719932_x_at",5.326271E-4,0.08711529,-0.1421094,-5.326271E-4,-0.019450665,0.02634716,0.9264494,0.7808471,-1.0141529,-0.020275157,1.0141529,"down","KIAA0319L",79932.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0044433 // cytoplasmic vesicle part // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr1:35899090-36023037 (-) // 92.73 // p34.3"]
["11719136_at",-0.0026931763,0.0026931763,0.08277035,-0.12685204,0.011806488,-0.085785866,0.5028893,0.12902892,1.0677204,0.09453392,1.0677204,"up","THOC1",9984.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006396 // RNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from direct assay /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0032784 // regulation of transcription elongation, DNA-dependent // inferred from direct assay /// 0046784 // intronless viral mRNA export from host nucleus // inferred from direct assay /// 0051028 // mRNA transport // inferred from electronic annotation","0000346 // transcription export complex // inferred from direct assay /// 0000347 // THO complex // inferred from direct assay /// 0000445 // THO complex part of transcription export complex // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016363 // nuclear matrix // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr18:214245-268059 (-) // 98.92 // p11.32"]
["11744110_at",-0.034111977,0.020386696,0.051628113,0.07170868,-0.020386696,-0.047611237,0.93613476,0.8081529,1.0079314,0.011397383,1.0079314,"up","TMEM101",84336.0,"0007165 // signal transduction // inferred from mutant phenotype /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from mutant phenotype","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from mutant phenotype","chr17:42088555-42092524 (-) // 88.18 // q21.31"]
["11735778_a_at",0.0020399094,0.07914829,0.10153246,-0.0020399094,-0.10910463,-0.16159868,0.3682359,0.052912593,1.1109711,0.15182127,1.1109711,"up","SYNE2",23224.0,"0006998 // nuclear envelope organization // inferred from electronic annotation /// 0007097 // nuclear migration // inferred from mutant phenotype /// 0007163 // establishment or maintenance of cell polarity // inferred from electronic annotation /// 0010761 // fibroblast migration // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from sequence or structural similarity /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0031022 // nuclear migration along microfilament // inferred from sequence or structural similarity /// 0031022 // nuclear migration along microfilament // inferred from electronic annotation /// 0034504 // protein localization to nucleus // inferred from electronic annotation /// 0051642 // centrosome localization // inferred from mutant phenotype /// 0051642 // centrosome localization // inferred from electronic annotation /// 0090286 // cytoskeletal anchoring at nuclear membrane // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from direct assay /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005640 // nuclear outer membrane // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016529 // sarcoplasmic reticulum // inferred from direct assay /// 0016529 // sarcoplasmic reticulum // inferred from electronic annotation /// 0030016 // myofibril // inferred from electronic annotation /// 0030018 // Z disc // inferred from direct assay /// 0030018 // Z disc // inferred from electronic annotation /// 0031258 // lamellipodium membrane // inferred from direct assay /// 0031527 // filopodium membrane // inferred from direct assay /// 0031965 // nuclear membrane // inferred from direct assay /// 0031981 // nuclear lumen // inferred from direct assay /// 0033017 // sarcoplasmic reticulum membrane // inferred from electronic annotation /// 0034993 // SUN-KASH complex // inferred from direct assay /// 0044429 // mitochondrial part // inferred from direct assay","0003779 // actin binding // inferred from electronic annotation /// 0003779 // actin binding // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction","chr14:64319682-64693151 (+) // 99.51 // q23.2"]
["11757595_x_at",0.023918152,0.1811037,-0.023918152,-0.095047,0.07021999,-0.18894482,0.63111794,0.24975124,1.095527,0.13162512,1.095527,"up","CRABP2",1382.0,"0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0008544 // epidermis development // traceable author statement /// 0035115 // embryonic forelimb morphogenesis // inferred from electronic annotation /// 0042573 // retinoic acid metabolic process // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation","0001972 // retinoic acid binding // inferred from electronic annotation /// 0005215 // transporter activity // inferred from electronic annotation /// 0005501 // retinoid binding // traceable author statement /// 0008289 // lipid binding // inferred from electronic annotation /// 0016918 // retinal binding // inferred from electronic annotation /// 0019841 // retinol binding // inferred from electronic annotation","chr1:156669401-156670710 (-) // 90.51 // q23.1"]
["11746365_a_at",0.09775734,-0.08244276,-0.07166624,0.19812298,0.01523304,-0.01523304,0.7340201,0.39242026,-1.060559,-0.08482493,1.060559,"down","EPB41",2035.0,"0008015 // blood circulation // traceable author statement /// 0030036 // actin cytoskeleton organization // non-traceable author statement /// 0030866 // cortical actin cytoskeleton organization // inferred from electronic annotation /// 0032092 // positive regulation of protein binding // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005938 // cell cortex // inferred from electronic annotation /// 0008091 // spectrin // traceable author statement /// 0014731 // spectrin-associated cytoskeleton // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0019898 // extrinsic to membrane // inferred from electronic annotation /// 0030863 // cortical cytoskeleton // inferred from direct assay /// 0030863 // cortical cytoskeleton // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay","0003779 // actin binding // inferred from electronic annotation /// 0005198 // structural molecule activity // inferred from electronic annotation /// 0005200 // structural constituent of cytoskeleton // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005545 // 1-phosphatidylinositol binding // inferred from direct assay /// 0008092 // cytoskeletal protein binding // inferred from electronic annotation /// 0030507 // spectrin binding // traceable author statement","chr1:29241085-29442316 (+) // 91.94 // p35.3"]
["11735362_s_at",-0.06464386,0.13229561,-0.0017318726,0.07220793,-0.015668392,0.0017318726,0.99112535,0.97012705,1.0017687,0.0025494527,1.0017687,"up","AKTIP /// LOC100130746","100130746 /// 64400","0001934 // positive regulation of protein phosphorylation // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007032 // endosome organization // inferred from mutant phenotype /// 0007040 // lysosome organization // inferred from mutant phenotype /// 0008333 // endosome to lysosome transport // inferred from mutant phenotype /// 0015031 // protein transport // inferred from electronic annotation /// 0032092 // positive regulation of protein binding // inferred from direct assay /// 0045022 // early endosome to late endosome transport // inferred from mutant phenotype","0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030897 // HOPS complex // inferred from direct assay /// 0070695 // FHF complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation /// 0019787 // small conjugating protein ligase activity // non-traceable author statement","chr16:53525191-53537170 (-) // 98.97 // q12.2"]
["11726670_a_at",0.029283047,-0.029283524,0.05898285,0.051329613,-0.045689583,-0.06109476,0.7598139,0.43209696,1.0267932,0.038145706,1.0267932,"up","DCLRE1B",64858.0,"0000075 // cell cycle checkpoint // inferred from mutant phenotype /// 0000723 // telomere maintenance // inferred from mutant phenotype /// 0006281 // DNA repair // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0031627 // telomeric loop formation // inferred from sequence or structural similarity /// 0031627 // telomeric loop formation // inferred from electronic annotation /// 0031848 // protection from non-homologous end joining at telomere // inferred from mutant phenotype /// 0031848 // protection from non-homologous end joining at telomere // inferred from electronic annotation /// 0031860 // telomeric 3' overhang formation // inferred from sequence or structural similarity /// 0031860 // telomeric 3' overhang formation // inferred from electronic annotation /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation","0000781 // chromosome, telomeric region // inferred from direct assay /// 0000781 // chromosome, telomeric region // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation","0004518 // nuclease activity // inferred from electronic annotation /// 0004527 // exonuclease activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008409 // 5'-3' exonuclease activity // inferred from direct assay /// 0008409 // 5'-3' exonuclease activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr1:114447767-114456708 (+) // 86.37 // p13.2"]
["11733623_at",0.45497417,0.00758934,-0.07201576,-0.23992443,-0.00758934,0.11969757,0.7563537,0.4253994,1.1272347,0.17278792,1.1272347,"up","ZNF831",128611.0,"","0005622 // intracellular // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr20:57766074-57834168 (+) // 97.27 // q13.32"]
["11758603_s_at",0.03268051,-0.0041713715,0.19127083,-0.024140835,0.0041708946,-0.24432802,0.56278706,0.17780167,1.1183404,0.16135934,1.1183404,"up","PANK3",79646.0,"0015937 // coenzyme A biosynthetic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004594 // pantothenate kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr5:167983954-167984338 (-) // 100.0 // q34"]
["11723538_x_at",0.02737999,-0.013803482,0.060961723,-0.047410965,-0.038096428,0.013803482,0.5491147,0.16590779,1.0343665,0.04874744,1.0343665,"up","C16orf88",400506.0,"","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation","","chr16:19717673-19726705 (-) // 74.35 // p12.3"]
["11750062_a_at",-0.010538101,-0.08342075,-0.09205818,0.010538101,0.022359848,0.081861496,0.33860478,0.041993983,-1.0719658,-0.100258894,1.0719658,"down","UBXN1",51035.0,"0031397 // negative regulation of protein ubiquitination // inferred from direct assay /// 0032435 // negative regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // non-traceable author statement","0000502 // proteasome complex // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0034098 // Cdc48p-Npl4p-Ufd1p AAA ATPase complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0031593 // polyubiquitin binding // inferred from direct assay /// 0031625 // ubiquitin protein ligase binding // inferred from direct assay /// 0043130 // ubiquitin binding // inferred from direct assay /// 0051117 // ATPase binding // inferred from physical interaction /// 0071796 // K6-linked polyubiquitin binding // inferred from direct assay","chr11:62445389-62446567 (-) // 100.0 // q12.3"]
["11718534_at",0.001042366,2.8038025E-4,0.037150383,-2.8038025E-4,-0.0057735443,-0.038150787,0.56438917,0.17945844,1.0192863,0.0275593,1.0192863,"up","NKTR",4820.0,"0000413 // protein peptidyl-prolyl isomerization // inferred from electronic annotation /// 0006457 // protein folding // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation","0003755 // peptidyl-prolyl cis-trans isomerase activity // inferred from electronic annotation /// 0016018 // cyclosporin A binding // traceable author statement /// 0016853 // isomerase activity // inferred from electronic annotation /// 0042277 // peptide binding // inferred from electronic annotation","chr3:42642105-42690225 (+) // 92.45 // p22.1"]
["11748153_a_at",-0.018527985,-0.024314404,0.07154751,-0.021858215,0.07650852,0.018527985,0.9102536,0.7429048,-1.0103284,-0.014824324,1.0103284,"down","PTCD2",79810.0,"0001822 // kidney development // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0007005 // mitochondrion organization // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0048747 // muscle fiber development // inferred from electronic annotation /// 0050684 // regulation of mRNA processing // inferred from electronic annotation /// 0055010 // ventricular cardiac muscle tissue morphogenesis // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation","","chr5:71616193-71654055 (+) // 99.78 // q13.2"]
["11746538_s_at",0.20878696,0.063955784,0.06871724,-0.06395602,-0.26273823,-0.17852068,0.25475505,0.019438643,1.2160689,0.28222492,1.2160689,"up","FAM75C1 /// FAM75C2","441452 /// 645961","","","","chr9:90532876-90538571 (+) // 98.73 // q22.1 /// chr9:90744220-90753390 (-) // 99.71 // q22.1"]
["11758949_at",0.008739948,0.13221455,-0.011082649,0.0013356209,-0.08952522,-0.0013356209,0.6287902,0.24605498,1.0519983,0.073132314,1.0519983,"up","ASXL2",55252.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0035360 // positive regulation of peroxisome proliferator activated receptor signaling pathway // inferred from direct assay /// 0045600 // positive regulation of fat cell differentiation // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation","0042975 // peroxisome proliferator activated receptor binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:25960346-26101385 (-) // 97.95 // p23.3"]
["11740229_at",-0.13813758,0.0795784,-0.12475991,0.03061819,-0.020040512,0.020040512,0.72521967,0.3787233,-1.050672,-0.07131243,1.050672,"down","GSDMA",284110.0,"0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from direct assay","0005737 // cytoplasm // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","","chr17:38119225-38134110 (+) // 85.81 // q21.1"]
["11744961_a_at",0.024222374,0.21700096,0.036646366,-0.034272194,-0.024222374,-0.05308342,0.47179696,0.10783544,1.0941541,0.12981597,1.0941541,"up","IQCE",23288.0,"","0005739 // mitochondrion // inferred from electronic annotation","","chr7:2598690-2649915 (+) // 95.73 // p22.3"]
["11744504_x_at",-0.05240345,0.008238792,0.03846073,-0.008238792,0.0631361,-0.0498724,0.9811534,0.9369176,-1.0024819,-0.0035762426,1.0024819,"down","POLR2J",5439.0,"0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006283 // transcription-coupled nucleotide-excision repair // traceable author statement /// 0006289 // nucleotide-excision repair // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from direct assay /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006368 // transcription elongation from RNA polymerase II promoter // traceable author statement /// 0006370 // 7-methylguanosine mRNA capping // traceable author statement /// 0006468 // protein phosphorylation // inferred from direct assay /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0050434 // positive regulation of viral transcription // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005665 // DNA-directed RNA polymerase II, core complex // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003899 // DNA-directed RNA polymerase activity // inferred from electronic annotation /// 0003899 // DNA-directed RNA polymerase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0030275 // LRR domain binding // inferred from physical interaction","chr7:102113562-102119357 (-) // 92.32 // q22.1"]
["11750330_a_at",-0.022109509,0.34919453,0.08811188,-0.2708583,-0.077022076,0.022109747,0.53388095,0.15184721,1.1867279,0.24698916,1.1867279,"up","MYOCD",93649.0,"0001560 // regulation of cell growth by extracellular stimulus // inferred from electronic annotation /// 0001570 // vasculogenesis // inferred from electronic annotation /// 0003231 // cardiac ventricle development // inferred from electronic annotation /// 0003257 // positive regulation of transcription from RNA polymerase II promoter involved in myocardial precursor cell differentiation // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0010667 // negative regulation of cardiac muscle cell apoptotic process // inferred from electronic annotation /// 0010832 // negative regulation of myotube differentiation // inferred from electronic annotation /// 0030511 // positive regulation of transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0035051 // cardiac cell differentiation // non-traceable author statement /// 0035065 // regulation of histone acetylation // inferred from sequence or structural similarity /// 0035065 // regulation of histone acetylation // inferred from electronic annotation /// 0042692 // muscle cell differentiation // inferred from electronic annotation /// 0043388 // positive regulation of DNA binding // inferred from electronic annotation /// 0045661 // regulation of myoblast differentiation // inferred from electronic annotation /// 0045736 // negative regulation of cyclin-dependent protein kinase activity // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0045987 // positive regulation of smooth muscle contraction // inferred from direct assay /// 0048286 // lung alveolus development // inferred from electronic annotation /// 0048565 // digestive tract development // inferred from electronic annotation /// 0051145 // smooth muscle cell differentiation // inferred from mutant phenotype /// 0051145 // smooth muscle cell differentiation // inferred from electronic annotation /// 0051150 // regulation of smooth muscle cell differentiation // traceable author statement /// 0051150 // regulation of smooth muscle cell differentiation // inferred from electronic annotation /// 0051152 // positive regulation of smooth muscle cell differentiation // inferred from direct assay /// 0055007 // cardiac muscle cell differentiation // inferred from sequence or structural similarity /// 0055007 // cardiac muscle cell differentiation // inferred from electronic annotation /// 0055012 // ventricular cardiac muscle cell differentiation // inferred from electronic annotation /// 0060065 // uterus development // inferred from electronic annotation /// 0060157 // urinary bladder development // inferred from electronic annotation /// 0071956 // cellular component maintenance at cellular level // inferred from electronic annotation /// 0097070 // ductus arteriosus closure // inferred from electronic annotation /// 2000721 // positive regulation of transcription from RNA polymerase II promoter involved in smooth muscle cell differentiation // inferred from direct assay /// 2000724 // positive regulation of cardiac vascular smooth muscle cell differentiation // inferred from sequence or structural similarity /// 2000727 // positive regulation of cardiac muscle cell differentiation // inferred from direct assay /// 2001015 // negative regulation of skeletal muscle cell differentiation // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0001046 // core promoter sequence-specific DNA binding // inferred from direct assay /// 0001076 // RNA polymerase II transcription factor binding transcription factor activity // inferred from sequence or structural similarity /// 0001076 // RNA polymerase II transcription factor binding transcription factor activity // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from direct assay /// 0035035 // histone acetyltransferase binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0042826 // histone deacetylase binding // inferred from electronic annotation /// 0070412 // R-SMAD binding // inferred from electronic annotation","chr17:12569213-12667275 (+) // 99.36 // p12"]
["11718807_at",-0.0070724487,-0.060188293,0.0070724487,0.035597324,-0.06309271,0.09423542,0.7680882,0.44730923,-1.029761,-0.042309478,1.029761,"down","TNFRSF1B",7133.0,"0006915 // apoptotic process // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0033209 // tumor necrosis factor-mediated signaling pathway // traceable author statement /// 0033209 // tumor necrosis factor-mediated signaling pathway // inferred from electronic annotation /// 0050728 // negative regulation of inflammatory response // inferred from electronic annotation /// 0050779 // RNA destabilization // inferred from electronic annotation /// 0051044 // positive regulation of membrane protein ectodomain proteolysis // inferred from mutant phenotype /// 0071222 // cellular response to lipopolysaccharide // inferred from mutant phenotype","0005576 // extracellular region // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0045121 // membrane raft // inferred from direct assay /// 0045121 // membrane raft // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005031 // tumor necrosis factor-activated receptor activity // inferred from electronic annotation /// 0005031 // tumor necrosis factor-activated receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction","chr1:12227041-12269279 (+) // 84.71 // p36.22"]
["11742610_at",-0.014653683,-0.0968709,0.014653683,0.15749359,0.14523458,-0.24450397,0.9018523,0.72347206,-1.0364844,-0.051698346,1.0364844,"down","OR6C3",254786.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // non-traceable author statement /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // non-traceable author statement /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // non-traceable author statement /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr12:55725484-55726420 (+) // 100.0 // q13.2"]
["11737152_at",-0.01252079,-0.07782054,0.11024833,0.098683834,-0.096156836,0.01252079,0.9952113,0.98459435,1.0011233,0.001619683,1.0011233,"up","C4orf51",646603.0,"","","","chr4:146601355-146653949 (+) // 100.0 // q31.21"]
["11720525_a_at",0.00510931,0.06304264,-0.17955971,0.008342266,-0.0357852,-0.00510931,0.9096544,0.74138886,-1.0183865,-0.026285175,1.0183865,"down","HPS4",89781.0,"0006605 // protein targeting // inferred from direct assay /// 0006996 // organelle organization // inferred from electronic annotation /// 0007040 // lysosome organization // inferred from direct assay /// 0007596 // blood coagulation // inferred from electronic annotation /// 0007599 // hemostasis // traceable author statement /// 0030318 // melanocyte differentiation // inferred from electronic annotation /// 0048075 // positive regulation of eye pigmentation // traceable author statement /// 0050821 // protein stabilization // inferred from physical interaction","0005624 // membrane fraction // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005764 // lysosome // inferred from direct assay /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0042470 // melanosome // inferred from direct assay /// 0042827 // platelet dense granule // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046983 // protein dimerization activity // inferred from physical interaction","chr22:26847445-26879820 (-) // 98.99 // q12.1"]
["11746259_a_at",0.12312508,0.02947712,0.23223972,-0.02947712,-0.13371229,-0.033816814,0.3506395,0.04582786,1.1438909,0.1939494,1.1438909,"up","PIGA",5277.0,"0006501 // C-terminal protein lipidation // traceable author statement /// 0006506 // GPI anchor biosynthetic process // traceable author statement /// 0006506 // GPI anchor biosynthetic process // inferred from electronic annotation /// 0009058 // biosynthetic process // inferred from electronic annotation /// 0009893 // positive regulation of metabolic process // traceable author statement /// 0016254 // preassembly of GPI anchor in ER membrane // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0000506 // glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008194 // UDP-glycosyltransferase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0017176 // phosphatidylinositol N-acetylglucosaminyltransferase activity // traceable author statement /// 0017176 // phosphatidylinositol N-acetylglucosaminyltransferase activity // inferred from electronic annotation","chrX:15337579-15350115 (-) // 96.49 // p22.2"]
["11720089_a_at",-0.022850513,0.24542952,-0.05700159,-0.065526485,0.022850513,0.113147736,0.92762035,0.784965,1.0222173,0.031701874,1.0222173,"up","NRSN2",80023.0,"","0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0030133 // transport vesicle // inferred from sequence or structural similarity /// 0030133 // transport vesicle // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation","","chr20:327369-335507 (+) // 75.7 // p13"]
["11720443_s_at",-0.03371334,0.027648926,0.118050575,-0.027648926,0.05959034,-0.099793434,0.73992324,0.40039292,1.0424268,0.059946112,1.0424268,"up","BAZ1A",11177.0,"0006261 // DNA-dependent DNA replication // inferred from direct assay /// 0006338 // chromatin remodeling // traceable author statement /// 0006351 // transcription, DNA-dependent // non-traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0000228 // nuclear chromosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0008623 // chromatin accessibility complex // inferred from direct assay /// 0016590 // ACF complex // traceable author statement","0004402 // histone acetyltransferase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr14:35221936-35344853 (-) // 94.21 // q13.1"]
["11747540_a_at",-0.0075883865,-0.004412651,0.004412651,0.02727604,0.014369011,-0.023941994,0.8572852,0.6217599,-1.0058607,-0.008430502,1.0058607,"down","ADAM9",8754.0,"0000186 // activation of MAPKK activity // inferred from direct assay /// 0006508 // proteolysis // inferred from electronic annotation /// 0006509 // membrane protein ectodomain proteolysis // inferred from direct assay /// 0006509 // membrane protein ectodomain proteolysis // inferred from mutant phenotype /// 0007155 // cell adhesion // inferred from mutant phenotype /// 0007160 // cell-matrix adhesion // inferred from mutant phenotype /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from mutant phenotype /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from sequence or structural similarity /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0007229 // integrin-mediated signaling pathway // inferred by curator /// 0007229 // integrin-mediated signaling pathway // inferred from electronic annotation /// 0010042 // response to manganese ion // inferred from mutant phenotype /// 0030216 // keratinocyte differentiation // inferred from expression pattern /// 0033627 // cell adhesion mediated by integrin // inferred from mutant phenotype /// 0033630 // positive regulation of cell adhesion mediated by integrin // inferred from mutant phenotype /// 0033631 // cell-cell adhesion mediated by integrin // inferred from expression pattern /// 0034241 // positive regulation of macrophage fusion // inferred from mutant phenotype /// 0034612 // response to tumor necrosis factor // inferred from direct assay /// 0042117 // monocyte activation // inferred from mutant phenotype /// 0042542 // response to hydrogen peroxide // inferred from mutant phenotype /// 0050714 // positive regulation of protein secretion // inferred from direct assay /// 0051044 // positive regulation of membrane protein ectodomain proteolysis // inferred from sequence or structural similarity /// 0051044 // positive regulation of membrane protein ectodomain proteolysis // inferred from electronic annotation /// 0051088 // PMA-inducible membrane protein ectodomain proteolysis // inferred from direct assay /// 0051088 // PMA-inducible membrane protein ectodomain proteolysis // traceable author statement /// 0051384 // response to glucocorticoid stimulus // inferred from sequence or structural similarity /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation /// 0051549 // positive regulation of keratinocyte migration // inferred from mutant phenotype /// 0051592 // response to calcium ion // inferred from mutant phenotype /// 0071222 // cellular response to lipopolysaccharide // inferred from mutant phenotype","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from sequence or structural similarity /// 0005615 // extracellular space // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from sequence or structural similarity /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031233 // intrinsic to external side of plasma membrane // inferred from sequence or structural similarity /// 0031233 // intrinsic to external side of plasma membrane // inferred from electronic annotation","0004222 // metalloendopeptidase activity // inferred from direct assay /// 0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0004222 // metalloendopeptidase activity // inferred from mutant phenotype /// 0005080 // protein kinase C binding // inferred from sequence or structural similarity /// 0005080 // protein kinase C binding // inferred from electronic annotation /// 0005178 // integrin binding // inferred by curator /// 0005178 // integrin binding // inferred from direct assay /// 0005178 // integrin binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0005518 // collagen binding // inferred from mutant phenotype /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from mutant phenotype /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from physical interaction /// 0017124 // SH3 domain binding // inferred from sequence or structural similarity /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0043236 // laminin binding // inferred from mutant phenotype /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:38913160-38961311 (+) // 99.27 // p11.22"]
["11762478_at",-0.036079407,-0.10229826,0.14552689,0.036079645,-0.007408142,0.007408142,0.969241,0.9041148,-1.0067067,-0.009643442,1.0067067,"down","AGXT",189.0,"0006625 // protein targeting to peroxisome // inferred from mutant phenotype /// 0008152 // metabolic process // inferred from electronic annotation /// 0009436 // glyoxylate catabolic process // inferred from direct assay /// 0019265 // glycine biosynthetic process, by transamination of glyoxylate // inferred from direct assay /// 0019265 // glycine biosynthetic process, by transamination of glyoxylate // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042853 // L-alanine catabolic process // inferred from direct assay /// 0042866 // pyruvate biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046487 // glyoxylate metabolic process // inferred from mutant phenotype /// 0046487 // glyoxylate metabolic process // traceable author statement /// 0046487 // glyoxylate metabolic process // inferred from electronic annotation /// 0046724 // oxalic acid secretion // inferred from electronic annotation /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation /// 0051591 // response to cAMP // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // inferred from electronic annotation /// 0005777 // peroxisome // inferred from direct assay /// 0005777 // peroxisome // inferred from electronic annotation /// 0005782 // peroxisomal matrix // inferred from direct assay /// 0005782 // peroxisomal matrix // traceable author statement","0003824 // catalytic activity // inferred from electronic annotation /// 0004760 // serine-pyruvate transaminase activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008453 // alanine-glyoxylate transaminase activity // inferred from direct assay /// 0008453 // alanine-glyoxylate transaminase activity // traceable author statement /// 0008453 // alanine-glyoxylate transaminase activity // inferred from electronic annotation /// 0008483 // transaminase activity // inferred from direct assay /// 0008483 // transaminase activity // inferred from electronic annotation /// 0016597 // amino acid binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from direct assay /// 0030170 // pyridoxal phosphate binding // inferred from mutant phenotype /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay","chr2:241816329-241819330 (+) // 58.66 // q37.3"]
["11759995_at",0.11888695,-0.0159235,-0.1523385,0.09668398,-0.056772232,0.0159235,0.8993146,0.71655035,-1.0246066,-0.03507007,1.0246066,"down","TP53BP1",7158.0,"0000724 // double-strand break repair via homologous recombination // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006302 // double-strand break repair // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from direct assay /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // non-traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred by curator","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0000781 // chromosome, telomeric region // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005654 // nucleoplasm // inferred from direct assay /// 0005657 // replication fork // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay","0001102 // RNA polymerase II activating transcription factor binding // inferred from physical interaction /// 0001104 // RNA polymerase II transcription cofactor activity // inferred from mutant phenotype /// 0002039 // p53 binding // inferred from physical interaction /// 0003677 // DNA binding // inferred from electronic annotation /// 0003684 // damaged DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0042162 // telomeric DNA binding // inferred from electronic annotation","chr15:43707419-43785354 (-) // 96.23 // q15.3"]
["11734750_a_at",-0.11742926,0.007966995,0.17327118,-0.13852215,0.007966995,-0.007966518,0.80962247,0.52158153,1.0478582,0.06744355,1.0478582,"up","LIN52",91750.0,"0000278 // mitotic cell cycle // traceable author statement","0005654 // nucleoplasm // traceable author statement","","chr14:74551498-74667117 (+) // 84.77 // q24.3"]
["11723954_s_at",-0.03713417,-0.033123016,0.12347126,-0.012916565,0.06904411,0.012916565,0.9790735,0.9320604,-1.0036643,-0.005276741,1.0036643,"down","CLINT1",9685.0,"0006892 // post-Golgi vesicle-mediated transport // traceable author statement /// 0006897 // endocytosis // inferred from electronic annotation /// 0016044 // cellular membrane organization // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030136 // clathrin-coated vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008289 // lipid binding // inferred from electronic annotation /// 0030276 // clathrin binding // inferred from physical interaction","chr5:157213296-157286183 (-) // 97.83 // q33.3"]
["11760231_x_at",-0.11564875,0.005121231,0.11091709,0.0030727386,-0.0030727386,-0.13227415,0.8503646,0.6052276,1.0311264,0.044221167,1.0311264,"up","TDGF1P3",6998.0,"0000187 // activation of MAPK activity // inferred from direct assay /// 0001570 // vasculogenesis // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001763 // morphogenesis of a branching structure // traceable author statement /// 0001954 // positive regulation of cell-matrix adhesion // inferred from electronic annotation /// 0002042 // cell migration involved in sprouting angiogenesis // inferred from mutant phenotype /// 0007165 // signal transduction // inferred from direct assay /// 0007173 // epidermal growth factor receptor signaling pathway // inferred from direct assay /// 0007369 // gastrulation // inferred from electronic annotation /// 0007500 // mesodermal cell fate determination // non-traceable author statement /// 0007507 // heart development // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0008595 // anterior/posterior axis specification, embryo // inferred from electronic annotation /// 0008595 // anterior/posterior axis specification, embryo // inferred from sequence or structural similarity /// 0009790 // embryo development // traceable author statement /// 0009948 // anterior/posterior axis specification // inferred from electronic annotation /// 0009966 // regulation of signal transduction // inferred from electronic annotation /// 0009966 // regulation of signal transduction // inferred from direct assay /// 0010595 // positive regulation of endothelial cell migration // inferred from direct assay /// 0018105 // peptidyl-serine phosphorylation // inferred from direct assay /// 0030154 // cell differentiation // traceable author statement /// 0030334 // regulation of cell migration // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0030509 // BMP signaling pathway // inferred from electronic annotation /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0030879 // mammary gland development // traceable author statement /// 0035729 // cellular response to hepatocyte growth factor stimulus // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0044344 // cellular response to fibroblast growth factor stimulus // inferred from direct assay /// 0048146 // positive regulation of fibroblast proliferation // inferred from electronic annotation /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0055007 // cardiac muscle cell differentiation // inferred from electronic annotation /// 0060070 // canonical Wnt receptor signaling pathway // inferred from electronic annotation /// 0071346 // cellular response to interferon-gamma // inferred from direct assay /// 0071354 // cellular response to interleukin-6 // inferred from direct assay /// 0071356 // cellular response to tumor necrosis factor // inferred from direct assay /// 0071364 // cellular response to epidermal growth factor stimulus // inferred from direct assay","0005615 // extracellular space // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009279 // cell outer membrane // inferred from direct assay /// 0009986 // cell surface // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from direct assay /// 0019897 // extrinsic to plasma membrane // inferred from electronic annotation /// 0019897 // extrinsic to plasma membrane // inferred from sequence or structural similarity /// 0031225 // anchored to membrane // inferred from electronic annotation /// 0045121 // membrane raft // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005102 // receptor binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // non-traceable author statement /// 0008083 // growth factor activity // inferred from direct assay /// 0008083 // growth factor activity // inferred from electronic annotation","chrX:109763539-109766249 (+) // 87.51 // q23"]
["11735161_s_at",-0.056982994,0.04351759,-0.15274525,-0.007985115,0.007985115,0.10256195,0.6300444,0.2481912,-1.0640684,-0.089590944,1.0640684,"down","DLX4",1748.0,"0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0000976 // transcription regulatory region sequence-specific DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr17:48046587-48052322 (+) // 96.97 // q21.33"]
["11760640_at",0.06005621,-0.15362954,-0.062506914,0.08293581,0.03651285,-0.03651285,0.6889942,0.3246173,-1.0567777,-0.07967195,1.0567777,"down","KCNQ2",3785.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006813 // potassium ion transport // traceable author statement /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007399 // nervous system development // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0071805 // potassium ion transmembrane transport // traceable author statement /// 0071805 // potassium ion transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // traceable author statement /// 0008076 // voltage-gated potassium channel complex // inferred from electronic annotation /// 0008076 // voltage-gated potassium channel complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0033268 // node of Ranvier // inferred from sequence or structural similarity /// 0043194 // initial segment // inferred from sequence or structural similarity","0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005249 // voltage-gated potassium channel activity // inferred from electronic annotation /// 0005249 // voltage-gated potassium channel activity // traceable author statement /// 0005267 // potassium channel activity // traceable author statement /// 0005267 // potassium channel activity // inferred from electronic annotation /// 0030506 // ankyrin binding // inferred from physical interaction","chr20:62068414-62071639 (-) // 67.8 // q13.33"]
["11748027_x_at",-0.10582304,0.04645729,-0.04162979,-0.03781271,0.03781271,0.05500555,0.7249876,0.37838206,-1.0367013,-0.052000307,1.0367013,"down","MBD3",53615.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0006346 // methylation-dependent chromatin silencing // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0009888 // tissue development // inferred from electronic annotation /// 0016573 // histone acetylation // inferred from electronic annotation","0000785 // chromatin // inferred from electronic annotation /// 0000792 // heterochromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016581 // NuRD complex // non-traceable author statement /// 0016581 // NuRD complex // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0003682 // chromatin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr19:1576677-1592760 (-) // 91.44 // p13.3"]
["11722658_at",0.11285257,-0.04340267,-0.05777645,0.04340267,0.05613184,-0.103618145,0.9847724,0.947474,1.0036473,0.0052524083,1.0036473,"up","CXCL17",284340.0,"0001525 // angiogenesis // inferred from electronic annotation /// 0006935 // chemotaxis // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","","chr19:42932429-42947200 (-) // 98.5 // q13.2"]
["11748533_x_at",-9.212494E-4,9.212494E-4,-0.02875328,0.040828705,0.0117406845,-0.008676529,0.6183342,0.23363881,-1.0169265,-0.024215449,1.0169265,"down","IST1",9798.0,"0007049 // cell cycle // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from direct assay /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr16:71929433-71962242 (+) // 96.4 // q22.2"]
["11755572_x_at",0.06867981,0.021816254,-0.0329628,-0.0061330795,0.0061330795,-0.07528877,0.68402356,0.31745526,1.0311642,0.04427404,1.0311642,"up","MAP7D1",55700.0,"","0005737 // cytoplasm // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation","","chr1:36643512-36646441 (+) // 93.42 // p34.3"]
["11759255_at",-0.078415394,0.15896702,-0.059859276,-0.02713418,0.16543913,0.027134418,0.8648242,0.6395444,-1.0340092,-0.048249047,1.0340092,"down","PCDHGB5",56101.0,"0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr5:140767264-140780223 (+) // 100.0 // q31.3"]
["11749019_a_at",-0.018118858,-0.02259922,0.11674309,0.09330845,0.005997658,-0.005997658,0.9755149,0.922187,-1.0040013,-0.0057610795,1.0040013,"down","MYNN",55892.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008270 // zinc ion binding // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:169491173-169504524 (+) // 99.8 // q26.2"]
["11738071_at",-0.0038514137,0.19384265,0.09038186,-0.017168999,-0.008841753,0.0038514137,0.5361766,0.15386765,1.0724008,0.10084421,1.0724008,"up","ZNF519",162655.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr18:14103863-14132429 (-) // 99.51 // p11.21"]
["11736862_at",-0.10301995,0.049457073,0.22824073,0.13316965,-0.11033535,-0.04945731,0.851199,0.6072723,1.047609,0.06710032,1.047609,"up","CXorf41",139212.0,"","","","chrX:106449905-106487472 (+) // 86.23 // q22.3"]
["11727755_a_at",0.0034704208,-0.020935535,-0.0034704208,0.0034704208,-0.34224606,0.027989388,0.77959365,0.46502575,1.0692631,0.09661688,1.0692631,"up","ZNF653",115950.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:11594241-11616821 (-) // 94.11 // p13.2"]
["11759050_at",0.026450396,-0.026932478,-0.21279216,-0.026450634,0.17985773,0.114751816,0.5486142,0.16534433,-1.1176572,-0.16047774,1.1176572,"down","DAB1",1600.0,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation","","","chr1:57460452-58716211 (-) // 98.29 // p32.2"]
["11732748_at",0.020889282,0.22928429,-0.020889282,0.06530237,-0.06126833,-0.04137993,0.7158981,0.36365864,1.0635418,0.088876694,1.0635418,"up","DNAH6",1768.0,"0006200 // ATP catabolic process // inferred from electronic annotation /// 0007018 // microtubule-based movement // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0030286 // dynein complex // inferred from electronic annotation /// 0035085 // cilium axoneme // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003774 // motor activity // inferred from electronic annotation /// 0003777 // microtubule motor activity // non-traceable author statement /// 0003777 // microtubule motor activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation","chr2:84743578-85046713 (+) // 99.08 // p11.2"]
["11740634_a_at",0.01695323,-0.05592656,-0.28115845,0.2818737,0.16445112,-0.01695323,0.48594528,0.116129234,-1.1890707,-0.2498345,1.1890707,"down","FOXP2",93986.0,"0002053 // positive regulation of mesenchymal cell proliferation // not recorded /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007389 // pattern specification process // not recorded /// 0007519 // skeletal muscle tissue development // not recorded /// 0009790 // embryo development // not recorded /// 0009791 // post-embryonic development // not recorded /// 0021549 // cerebellum development // not recorded /// 0021757 // caudate nucleus development // inferred from mutant phenotype /// 0021758 // putamen development // inferred from mutant phenotype /// 0021987 // cerebral cortex development // inferred from expression pattern /// 0040007 // growth // not recorded /// 0042297 // vocal learning // not recorded /// 0043010 // camera-type eye development // not recorded /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0048286 // lung alveolus development // not recorded /// 0048745 // smooth muscle tissue development // not recorded /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // not recorded /// 0060013 // righting reflex // not recorded /// 0060501 // positive regulation of epithelial cell proliferation involved in lung morphogenesis // not recorded","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // not recorded /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // not recorded","0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // not recorded /// 0003690 // double-stranded DNA binding // not recorded /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // not recorded /// 0008134 // transcription factor binding // not recorded /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008301 // DNA binding, bending // not recorded /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // not recorded","chr7:114055051-114331100 (+) // 94.92 // q31.1"]
["11730798_a_at",0.005153656,-0.061411858,0.030168533,-0.0095329285,-4.968643E-4,4.9734116E-4,0.9505735,0.8508074,-1.0038328,-0.005519016,1.0038328,"down","FAM114A2",10827.0,"","","0017076 // purine nucleotide binding // non-traceable author statement","chr5:153371270-153418498 (-) // 99.69 // q33.2"]
["11762387_x_at",-0.14295292,-0.15639639,-0.04827547,0.06995344,0.11179972,0.04827547,0.179878,0.0076881037,-1.1427827,-0.19255108,1.1427827,"down","MYO3B",140469.0,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0007601 // visual perception // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0016459 // myosin complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003774 // motor activity // inferred from electronic annotation /// 0003779 // actin binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr2:171034654-171376480 (+) // 92.93 // q31.1"]
["11715297_at",-0.054205656,0.019838333,-0.14287901,-0.019838333,0.043350697,0.15823317,0.547031,0.16350175,-1.0864818,-0.11966402,1.0864818,"down","FXN",2395.0,"0006119 // oxidative phosphorylation // inferred from electronic annotation /// 0006783 // heme biosynthetic process // non-traceable author statement /// 0006783 // heme biosynthetic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // inferred from mutant phenotype /// 0006879 // cellular iron ion homeostasis // inferred from electronic annotation /// 0007005 // mitochondrion organization // inferred from electronic annotation /// 0007628 // adult walking behavior // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0009060 // aerobic respiration // inferred from electronic annotation /// 0009792 // embryo development ending in birth or egg hatching // inferred from electronic annotation /// 0010039 // response to iron ion // inferred from mutant phenotype /// 0010722 // regulation of ferrochelatase activity // inferred from direct assay /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0016226 // iron-sulfur cluster assembly // inferred from electronic annotation /// 0016540 // protein autoprocessing // inferred from direct assay /// 0018283 // iron incorporation into metallo-sulfur cluster // inferred from direct assay /// 0019230 // proprioception // inferred from electronic annotation /// 0030307 // positive regulation of cell growth // inferred from mutant phenotype /// 0040015 // negative regulation of multicellular organism growth // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0045773 // positive regulation of axon extension // inferred from electronic annotation /// 0046621 // negative regulation of organ growth // inferred from electronic annotation /// 0048554 // positive regulation of metalloenzyme activity // inferred from mutant phenotype /// 0051347 // positive regulation of transferase activity // inferred from mutant phenotype /// 0051349 // positive regulation of lyase activity // inferred from direct assay /// 0051349 // positive regulation of lyase activity // inferred from mutant phenotype /// 0051353 // positive regulation of oxidoreductase activity // inferred from mutant phenotype /// 0055072 // iron ion homeostasis // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0070301 // cellular response to hydrogen peroxide // inferred from direct assay /// 0090201 // negative regulation of release of cytochrome c from mitochondria // inferred from mutant phenotype","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // inferred from sequence or structural similarity /// 0005759 // mitochondrial matrix // non-traceable author statement /// 0005829 // cytosol // inferred from direct assay","0004322 // ferroxidase activity // inferred from direct assay /// 0004322 // ferroxidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008198 // ferrous iron binding // inferred from direct assay /// 0008199 // ferric iron binding // inferred from direct assay /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from electronic annotation /// 0034986 // iron chaperone activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from direct assay /// 0051537 // 2 iron, 2 sulfur cluster binding // inferred from direct assay","chr9:71650478-71715094 (+) // 94.59 // q21.11"]
["11730111_a_at",-0.032212257,0.015913963,0.07174778,-0.009124756,0.009124756,-0.03680706,0.74131876,0.40248773,1.0215446,0.030752158,1.0215446,"up","DEPDC1",55635.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0017053 // transcriptional repressor complex // inferred from direct assay","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr1:68939834-68962799 (-) // 78.37 // p31.2"]
["11727691_a_at",-0.1077013,0.13985348,0.006717682,-0.056108475,-0.006717682,0.12098789,0.9841003,0.94579864,-1.0044674,-0.006430696,1.0044674,"down","IL11",3589.0,"0007267 // cell-cell signaling // inferred by curator /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0030168 // platelet activation // non-traceable author statement /// 0030183 // B cell differentiation // non-traceable author statement /// 0030219 // megakaryocyte differentiation // non-traceable author statement /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from direct assay /// 0043410 // positive regulation of MAPK cascade // inferred from direct assay /// 0045444 // fat cell differentiation // non-traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0046888 // negative regulation of hormone secretion // inferred from direct assay /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from direct assay","0005576 // extracellular region // inferred by curator /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0005125 // cytokine activity // inferred from electronic annotation /// 0005142 // interleukin-11 receptor binding // non-traceable author statement /// 0005142 // interleukin-11 receptor binding // inferred from electronic annotation /// 0008083 // growth factor activity // inferred from direct assay /// 0008083 // growth factor activity // inferred from electronic annotation","chr19:55875757-55881834 (-) // 61.82 // q13.42"]
["11737317_at",0.006354332,0.04615116,-0.015181065,0.005408764,-0.005408764,-0.23375106,0.68728006,0.32195792,1.0646347,0.090358466,1.0646347,"up","C1orf95",375057.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr1:226736500-226793554 (+) // 88.44 // q42.12"]
["11722880_a_at",0.04566002,0.10926914,0.10809231,-0.06517029,-0.1290474,-0.04566002,0.17501806,0.006927023,1.1232141,0.16763298,1.1232141,"up","PHF19",26147.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:123631852-123639606 (-) // 73.08 // q33.2"]
["11754381_a_at",0.052776337,-0.07256508,-0.17462254,0.083108425,0.069630146,-0.052776337,0.6550999,0.28045085,-1.070381,-0.098124474,1.070381,"down","TMOD1",7111.0,"0030049 // muscle filament sliding // traceable author statement /// 0030239 // myofibril assembly // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0008180 // signalosome // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030016 // myofibril // inferred from electronic annotation /// 0030863 // cortical cytoskeleton // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0005523 // tropomyosin binding // inferred from electronic annotation","chr9:100360658-100364028 (+) // 91.78 // q22.33"]
["11741447_s_at",-0.066782475,-0.13197374,-0.23533487,0.066782475,0.14891958,0.18543053,0.19679223,0.009916339,-1.2128557,-0.2784079,1.2128557,"down","RNASE4",6038.0,"0006379 // mRNA cleavage // non-traceable author statement /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation","0005576 // extracellular region // inferred from direct assay /// 0005576 // extracellular region // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004519 // endonuclease activity // inferred from electronic annotation /// 0004522 // pancreatic ribonuclease activity // non-traceable author statement /// 0004522 // pancreatic ribonuclease activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr14:21156944-21168757 (+) // 86.55 // q11.2"]
["11744281_a_at",-0.060674667,0.021383762,-0.02138424,0.07454491,-0.20914459,0.19925547,0.9139863,0.751469,-1.0293809,-0.041776944,1.0293809,"down","FAM53B",9679.0,"","","","chr10:126307862-126432930 (-) // 97.86 // q26.13"]
["11730893_a_at",-0.054876328,-0.014009953,-0.068014145,0.070381165,0.014009476,0.14841652,0.34235522,0.04330322,-1.0891751,-0.12323591,1.0891751,"down","UBA6",55236.0,"0006464 // cellular protein modification process // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from mutant phenotype /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from mutant phenotype","0005737 // cytoplasm // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008641 // small protein activating enzyme activity // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0019780 // FAT10 activating enzyme activity // inferred from mutant phenotype /// 0019780 // FAT10 activating enzyme activity // inferred from electronic annotation","chr4:68481309-68566897 (-) // 86.19 // q13.2"]
["200092_PM_s_at",-0.029280663,-0.0034418106,0.022618294,-0.005083084,0.003440857,0.003440857,0.93602425,0.8075637,-1.002754,-0.0039676824,1.002754,"down","RPL37",6167.0,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral infectious cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003723 // RNA binding // traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0003735 // structural constituent of ribosome // traceable author statement /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0019843 // rRNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr5:40832569-40835312 (-) // 90.1 // p13.1"]
["11730368_at",-0.056257248,0.016310215,-0.07600212,0.037577152,0.031446457,-0.016310215,0.5458554,0.16196087,-1.0397385,-0.056220777,1.0397385,"down","ZNF557",79230.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:7069454-7088455 (+) // 57.71 // p13.2"]
["11739751_s_at",0.024380207,-0.055397987,0.16805458,-0.01424551,-0.030207634,0.014245033,0.76980364,0.45002228,1.0393981,0.05574829,1.0393981,"up","SLC25A16",8034.0,"0006766 // vitamin metabolic process // traceable author statement /// 0006767 // water-soluble vitamin metabolic process // traceable author statement /// 0006810 // transport // non-traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0009108 // coenzyme biosynthetic process // traceable author statement /// 0015939 // pantothenate metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // non-traceable author statement /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0015300 // solute:solute antiporter activity // non-traceable author statement","chr10:70242001-70287783 (-) // 83.33 // q21.3"]
["11761145_a_at",-0.021526337,-0.014518738,-0.08998537,0.014518738,0.17447376,0.061454296,0.4216753,0.077853315,-1.09088,-0.12549245,1.09088,"down","ZNF273",10793.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:64363624-64854161 (+) // 31.12 // q11.21"]
["11721087_x_at",-0.02529502,0.02529478,-0.09133148,0.075884104,-0.02529502,0.19985485,0.5813388,0.19529782,-1.0821686,-0.113925256,1.0821686,"down","YLPM1",56252.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr14:75230018-75304012 (+) // 98.34 // q24.3"]
["11733653_at",-0.17900896,0.0,0.051783323,0.0,-0.0044317245,0.06550908,0.7649404,0.4411396,-1.0444676,-0.06276769,1.0444676,"down","FTMT",94033.0,"0006826 // iron ion transport // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // inferred from direct assay /// 0006879 // cellular iron ion homeostasis // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0051347 // positive regulation of transferase activity // inferred from direct assay /// 0051349 // positive regulation of lyase activity // inferred from direct assay /// 0051353 // positive regulation of oxidoreductase activity // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation","0004322 // ferroxidase activity // inferred from electronic annotation /// 0008199 // ferric iron binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046914 // transition metal ion binding // inferred from electronic annotation","chr5:121187595-121188524 (+) // 98.0 // q23.1"]
["11722291_s_at",-0.01152277,-0.054510593,0.011522293,0.042268276,-0.042509556,0.055482388,0.72052205,0.37042108,-1.0256823,-0.036583975,1.0256823,"down","ZBTB43",23099.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:129567282-129600489 (+) // 84.25 // q33.3"]
["11745895_a_at",0.06879616,-0.014591217,0.19250107,0.014591217,-0.28991413,-0.08326149,0.5110328,0.13525121,1.1501033,0.20176348,1.1501033,"up","UPF2",26019.0,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // inferred from mutant phenotype /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016070 // RNA metabolic process // inferred from electronic annotation /// 0016071 // mRNA metabolic process // traceable author statement /// 0031100 // organ regeneration // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0035145 // exon-exon junction complex // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr10:11962021-12077896 (-) // 92.91 // p14"]
["11749354_x_at",0.017676353,-0.017676353,0.019141197,0.0208807,-0.019640923,-0.024798393,0.7934688,0.49116826,1.0099146,0.014233354,1.0099146,"up","WDR41",55255.0,"","","","chr5:76734063-76916401 (-) // 96.61 // q13.3"]
["11738415_a_at",-0.045260906,0.14870095,0.28961062,-0.08765793,-0.07074928,0.045260906,0.5716299,0.18558231,1.1240704,0.1687324,1.1240704,"up","TBR1",10716.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007411 // axon guidance // inferred from electronic annotation /// 0007420 // brain development // traceable author statement /// 0030902 // hindbrain development // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement","chr2:162272619-162281573 (+) // 93.44 // q24.2"]
["11764047_at",-0.08214903,-0.03242612,0.06041479,-0.05090809,0.074468136,0.032426357,0.8222854,0.54581374,-1.0257759,-0.036715593,1.0257759,"down","CCIN",881.0,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // non-traceable author statement /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // non-traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0033150 // cytoskeletal calyx // inferred from electronic annotation","0005200 // structural constituent of cytoskeleton // non-traceable author statement","chr9:36170831-36171336 (-) // 100.0 // p13.3"]
["11716428_a_at",0.069086075,0.020353317,0.032654762,-0.06342888,-0.020353317,-0.06986809,0.21666434,0.012587287,1.0657839,0.091914885,1.0657839,"up","PMF1 /// PMF1-BGLAP","100527963 /// 11243","0000087 // M phase of mitotic cell cycle // traceable author statement /// 0000236 // mitotic prometaphase // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007059 // chromosome segregation // inferred from mutant phenotype /// 0007059 // chromosome segregation // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0000444 // MIS12/MIND type complex // inferred from direct assay /// 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0003713 // transcription coactivator activity // inferred from mutant phenotype /// 0003713 // transcription coactivator activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0043522 // leucine zipper domain binding // inferred from physical interaction","chr1:156182797-156210096 (+) // 97.42 // q22"]
["11752222_s_at",-0.093054295,-0.1049037,-0.06763744,0.14472055,0.18596935,0.06763744,0.13958265,0.0036905545,-1.1657897,-0.22130759,1.1657897,"down","ZNF137P",7696.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:53099908-53541926 (+) // 51.12 // q13.41"]
["11734388_s_at",-0.18033719,0.09508538,-0.13677692,0.07922959,-0.0384171,0.038416862,0.69811964,0.33718622,-1.072085,-0.10041932,1.072085,"down","RAB40A",142684.0,"0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation","chrX:102754063-102774417 (-) // 95.18 // q22.2"]
["11723025_at",0.13095999,0.034657955,0.08244038,-0.38030338,-0.19395018,-0.034657717,0.36306703,0.05109914,1.2189648,0.28565648,1.2189648,"up","FAM26F",441168.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr6:116782916-116784933 (+) // 97.22 // q22.1"]
["11763585_s_at",-0.06760597,-0.05347538,0.15669632,0.035573006,0.04144287,-0.035573006,0.99420416,0.9809905,-1.0013474,-0.0019426114,1.0013474,"down","TMPO",7112.0,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0000785 // chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005635 // nuclear envelope // traceable author statement /// 0005637 // nuclear inner membrane // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005521 // lamin binding // traceable author statement","chr12:98909413-98944126 (+) // 87.99 // q23.1"]
["11734157_a_at",0.033570766,-0.030739307,0.12692738,-0.033570766,-0.047005177,0.030739307,0.6791898,0.31113893,1.0423683,0.059865106,1.0423683,"up","LENG1",79165.0,"","","0004872 // receptor activity // inferred from electronic annotation","chr19:54659378-54663468 (-) // 96.6 // q13.42"]
["11741537_a_at",-0.108362675,0.06970215,-0.12666464,0.20217896,-0.0013961792,0.0013961792,0.63405454,0.2538449,-1.0886207,-0.12250132,1.0886207,"down","KIF13A",63971.0,"0000910 // cytokinesis // inferred from mutant phenotype /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from mutant phenotype /// 0007018 // microtubule-based movement // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0008333 // endosome to lysosome transport // inferred from mutant phenotype /// 0015031 // protein transport // inferred from electronic annotation /// 0032438 // melanosome organization // inferred from mutant phenotype /// 0035459 // cargo loading into vesicle // inferred from mutant phenotype /// 0043001 // Golgi to plasma membrane protein transport // inferred from sequence or structural similarity /// 0051301 // cell division // inferred from electronic annotation /// 0072383 // plus-end-directed vesicle transport along microtubule // inferred from sequence or structural similarity","0000139 // Golgi membrane // inferred from electronic annotation /// 0005622 // intracellular // inferred from mutant phenotype /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from direct assay /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030496 // midbody // inferred from direct assay /// 0030496 // midbody // inferred from electronic annotation /// 0032588 // trans-Golgi network membrane // inferred from sequence or structural similarity","0000166 // nucleotide binding // inferred from electronic annotation /// 0003777 // microtubule motor activity // inferred from sequence or structural similarity /// 0003777 // microtubule motor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation","chr6:17763927-17987799 (-) // 97.06 // p22.3"]
["11722856_a_at",-0.050676346,-0.054624557,0.036629915,-0.036629915,0.036629915,0.21622968,0.67476004,0.30506513,-1.0680408,-0.09496682,1.0680408,"down","PDGFD",80310.0,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0050730 // regulation of peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0051781 // positive regulation of cell division // inferred from electronic annotation /// 0071230 // cellular response to amino acid stimulus // inferred from electronic annotation","0000139 // Golgi membrane // traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0008083 // growth factor activity // inferred from electronic annotation","chr11:103777913-104035129 (-) // 98.57 // q22.3"]
["11757156_s_at",0.02173996,-0.058163643,0.16156387,-0.017256737,0.011893272,-0.011893272,0.8004076,0.5046805,1.0334479,0.047465604,1.0334479,"up","SNHG12 /// SNORA16A /// SNORA44 /// SNORA61","677825 /// 677838 /// 692073 /// 85028","","","","chr1:28906275-28906405 (-) // 100.0 // p35.3"]
["11757265_x_at",-0.012656212,-8.392334E-4,0.030862808,0.02078724,8.392334E-4,-0.011958122,0.9614128,0.88116366,1.0017804,0.002566277,1.0017804,"up","EIF3K",27335.0,"0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred by curator /// 0006413 // translational initiation // inferred from direct assay /// 0006413 // translational initiation // traceable author statement /// 0006413 // translational initiation // inferred from electronic annotation /// 0006446 // regulation of translational initiation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005852 // eukaryotic translation initiation factor 3 complex // inferred from direct assay /// 0005852 // eukaryotic translation initiation factor 3 complex // inferred from electronic annotation","0003743 // translation initiation factor activity // inferred by curator /// 0003743 // translation initiation factor activity // inferred from direct assay /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0043022 // ribosome binding // inferred from electronic annotation","chr19:39109850-39127592 (+) // 82.93 // q13.2"]
["11742639_a_at",0.18113065,-0.1310904,-0.16396403,0.09520984,-0.01987338,0.01987338,0.83610755,0.5771884,-1.0495065,-0.06971116,1.0495065,"down","RDM1",201299.0,"0006281 // DNA repair // inferred from electronic annotation /// 0006310 // DNA recombination // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0015030 // Cajal body // inferred from electronic annotation /// 0016605 // PML body // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation","chr17:34249481-34257780 (-) // 100.0 // q12"]
["11738690_s_at",-0.0604043,-0.042491436,0.24183702,-0.10419369,0.042491436,0.05828905,0.8878301,0.6903181,1.0334377,0.04745146,1.0334377,"up","OR52I1 /// OR52I2","143502 /// 390037","0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr11:4608020-4609135 (+) // 100.0 // p15.4 /// chr11:4615168-4616293 (+) // 95.7 // p15.4"]
["200082_PM_s_at",8.201599E-5,-8.201599E-5,0.061556816,-0.037096977,0.015070915,-0.047350883,0.58246005,0.19645277,1.0307144,0.043644622,1.0307144,"up","RPS7",6201.0,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006364 // rRNA processing // inferred from mutant phenotype /// 0006412 // translation // inferred by curator /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral infectious cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0042274 // ribosomal small subunit biogenesis // inferred from mutant phenotype /// 0044267 // cellular protein metabolic process // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from direct assay /// 0005840 // ribosome // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0022627 // cytosolic small ribosomal subunit // non-traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0030686 // 90S preribosome // not recorded /// 0032040 // small-subunit processome // not recorded","0003723 // RNA binding // non-traceable author statement /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr2:3622908-3628502 (+) // 83.42 // p25.3"]
["11759536_a_at",-0.061933994,-0.004951,0.10594225,0.034623146,-0.07104111,0.004951477,0.8955875,0.70822495,1.0164279,0.023507845,1.0164279,"up","TTC17",55761.0,"0042981 // regulation of apoptotic process // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","","chr11:43380434-43516470 (+) // 98.79 // p12"]
["11756196_a_at",0.07355213,0.078837395,0.20211792,-0.07355213,-0.15483141,-0.08497906,0.20083624,0.010534805,1.1668534,0.22262335,1.1668534,"up","MTHFD1L",25902.0,"0006730 // one-carbon metabolic process // inferred from electronic annotation /// 0006760 // folic acid-containing compound metabolic process // inferred from direct assay /// 0009396 // folic acid-containing compound biosynthetic process // inferred from electronic annotation /// 0015942 // formate metabolic process // inferred from direct assay /// 0035999 // tetrahydrofolate interconversion // inferred from electronic annotation /// 0046653 // tetrahydrofolate metabolic process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004329 // formate-tetrahydrofolate ligase activity // inferred from direct assay /// 0004329 // formate-tetrahydrofolate ligase activity // inferred from electronic annotation /// 0004488 // methylenetetrahydrofolate dehydrogenase (NADP+) activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay","chr6:151187617-151220136 (+) // 70.84 // q25.1"]
["11753588_x_at",-0.0022821426,-0.009010315,0.0022821426,0.031845093,-0.037548065,0.016011238,0.92508817,0.7769713,-1.0044736,-0.0064395997,1.0044736,"down","RTN4",57142.0,"0001525 // angiogenesis // inferred from electronic annotation /// 0006915 // apoptotic process // non-traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0007413 // axonal fasciculation // inferred from sequence or structural similarity /// 0007413 // axonal fasciculation // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0010977 // negative regulation of neuron projection development // inferred from electronic annotation /// 0014823 // response to activity // inferred from electronic annotation /// 0019987 // negative regulation of anti-apoptosis // inferred from mutant phenotype /// 0021553 // olfactory nerve development // inferred from electronic annotation /// 0021801 // cerebral cortex radial glia guided migration // inferred from sequence or structural similarity /// 0021801 // cerebral cortex radial glia guided migration // inferred from electronic annotation /// 0030308 // negative regulation of cell growth // inferred from mutant phenotype /// 0030334 // regulation of cell migration // inferred from direct assay /// 0030517 // negative regulation of axon extension // inferred from direct assay /// 0030517 // negative regulation of axon extension // inferred from electronic annotation /// 0033603 // positive regulation of dopamine secretion // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // non-traceable author statement /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0045687 // positive regulation of glial cell differentiation // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048679 // regulation of axon regeneration // inferred from electronic annotation /// 0048709 // oligodendrocyte differentiation // inferred from electronic annotation /// 0050770 // regulation of axonogenesis // traceable author statement /// 0050771 // negative regulation of axonogenesis // traceable author statement /// 0050771 // negative regulation of axonogenesis // inferred from electronic annotation /// 0051930 // regulation of sensory perception of pain // inferred from electronic annotation /// 0051960 // regulation of nervous system development // inferred from electronic annotation /// 0060317 // cardiac epithelial to mesenchymal transition // inferred from electronic annotation /// 0070571 // negative regulation of neuron projection regeneration // inferred from electronic annotation /// 0071786 // endoplasmic reticulum tubular network organization // inferred from mutant phenotype /// 2000172 // regulation of branching morphogenesis of a nerve // inferred from sequence or structural similarity /// 2000172 // regulation of branching morphogenesis of a nerve // inferred from electronic annotation","0005635 // nuclear envelope // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // non-traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030176 // integral to endoplasmic reticulum membrane // inferred from direct assay /// 0030176 // integral to endoplasmic reticulum membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043209 // myelin sheath // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0032403 // protein complex binding // inferred from electronic annotation","chr2:55200291-55237256 (-) // 99.5 // p16.1"]
["11733857_x_at",0.009015083,0.015584946,0.022841454,-0.009015083,-0.079325676,-0.098002434,0.35190377,0.046596467,1.0555012,0.077928245,1.0555012,"up","EGLN1",54583.0,"0001666 // response to hypoxia // inferred from direct assay /// 0032364 // oxygen homeostasis // inferred from direct assay /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0045765 // regulation of angiogenesis // inferred from sequence or structural similarity /// 0045765 // regulation of angiogenesis // inferred from electronic annotation /// 0055008 // cardiac muscle tissue morphogenesis // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0060347 // heart trabecula formation // inferred from electronic annotation /// 0060412 // ventricular septum morphogenesis // inferred from electronic annotation /// 0060711 // labyrinthine layer development // inferred from electronic annotation /// 0071731 // response to nitric oxide // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0005506 // iron ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016702 // oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen // inferred from electronic annotation /// 0016705 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen // inferred from electronic annotation /// 0016706 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors // inferred from electronic annotation /// 0031418 // L-ascorbic acid binding // inferred from electronic annotation /// 0031543 // peptidyl-proline dioxygenase activity // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:231499496-231560790 (-) // 85.4 // q42.2"]
["11716185_a_at",-0.015300751,-0.065312386,0.015300751,0.082178116,0.0858717,-0.044473648,0.6447124,0.26704758,-1.0446088,-0.06296281,1.0446088,"down","ALCAM",214.0,"0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007411 // axon guidance // inferred from electronic annotation /// 0008045 // motor axon guidance // inferred from electronic annotation","0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation","0005102 // receptor binding // traceable author statement","chr3:105085712-105295746 (+) // 96.66 // q13.11"]
["11758199_s_at",0.012817383,0.004009247,-0.004009247,-0.02864647,0.043712616,-0.04436779,0.86402583,0.6372048,1.0097791,0.014039716,1.0097791,"up","RAD23B",5887.0,"0000715 // nucleotide-excision repair, DNA damage recognition // inferred from direct assay /// 0000715 // nucleotide-excision repair, DNA damage recognition // traceable author statement /// 0000718 // nucleotide-excision repair, DNA damage removal // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006289 // nucleotide-excision repair // inferred from direct assay /// 0006289 // nucleotide-excision repair // traceable author statement /// 0006289 // nucleotide-excision repair // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0032434 // regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from electronic annotation","0000502 // proteasome complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0071942 // XPC complex // inferred from direct assay","0003684 // damaged DNA binding // inferred from electronic annotation /// 0003697 // single-stranded DNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0031593 // polyubiquitin binding // inferred from direct assay","chr9:110092634-110093174 (+) // 93.1 // q31.2"]
["11736565_at",-0.08411169,0.09936285,0.06352186,0.1967783,-0.06352186,-0.21899319,0.8928914,0.7026176,1.0387415,0.054836627,1.0387415,"up","PTPN14",5784.0,"0001946 // lymphangiogenesis // inferred from mutant phenotype /// 0006470 // protein dephosphorylation // traceable author statement /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // traceable author statement /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0030971 // receptor tyrosine kinase binding // inferred from physical interaction","chr1:214530673-214725024 (-) // 99.92 // q41"]
["11745130_x_at",0.028349876,0.068556786,0.07299042,-0.11174488,-0.02941227,-0.028349876,0.2655409,0.021914003,1.0815758,0.11313471,1.0815758,"up","HMGB3",3149.0,"0006310 // DNA recombination // inferred from sequence or structural similarity /// 0007275 // multicellular organismal development // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from sequence or structural similarity /// 0008301 // DNA binding, bending // inferred from sequence or structural similarity /// 0008301 // DNA binding, bending // traceable author statement","chrX:150151857-150156403 (+) // 74.39 // q28"]
["11741846_at",0.041515827,-0.041515827,-0.2611146,0.1796093,0.1563425,-0.05550766,0.58485293,0.19845572,-1.133292,-0.18051958,1.133292,"down","RAPH1",65059.0,"0007160 // cell-matrix adhesion // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030175 // filopodium // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005543 // phospholipid binding // inferred from electronic annotation","chr2:204306193-204400058 (-) // 96.63 // q33.2"]
["11737333_at",-0.040495872,0.11575389,0.01062727,-0.045161724,0.0782187,-0.01062727,0.90823585,0.7375486,1.0147693,0.021151802,1.0147693,"up","SIM1",6492.0,"0001657 // ureteric bud development // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr6:100836078-100912805 (-) // 93.49 // q16.3"]
["11732306_x_at",-0.10932636,-0.027797699,0.26148129,0.027797699,0.21221256,-0.08316898,0.98291296,0.9427567,-1.0075337,-0.010828051,1.0075337,"down","CREB1",1385.0,"0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from direct assay /// 0007165 // signal transduction // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0007202 // activation of phospholipase C activity // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007409 // axonogenesis // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007595 // lactation // inferred from electronic annotation /// 0008063 // Toll signaling pathway // traceable author statement /// 0008361 // regulation of cell size // inferred from electronic annotation /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0010033 // response to organic substance // inferred from direct assay /// 0010944 // negative regulation of transcription by competitive promoter binding // inferred from direct assay /// 0021983 // pituitary gland development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030879 // mammary gland development // inferred from electronic annotation /// 0032916 // positive regulation of transforming growth factor beta3 production // inferred from electronic annotation /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0040018 // positive regulation of multicellular organism growth // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042752 // regulation of circadian rhythm // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045600 // positive regulation of fat cell differentiation // inferred from sequence or structural similarity /// 0045600 // positive regulation of fat cell differentiation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046887 // positive regulation of hormone secretion // inferred from electronic annotation /// 0046889 // positive regulation of lipid biosynthetic process // inferred from sequence or structural similarity /// 0046889 // positive regulation of lipid biosynthetic process // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0050821 // protein stabilization // inferred from sequence or structural similarity /// 0050821 // protein stabilization // inferred from electronic annotation /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation","0000785 // chromatin // inferred from electronic annotation /// 0000790 // nuclear chromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005719 // nuclear euchromatin // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation","0000980 // RNA polymerase II distal enhancer sequence-specific DNA binding // inferred from direct assay /// 0001102 // RNA polymerase II activating transcription factor binding // inferred from physical interaction /// 0001190 // RNA polymerase II transcription factor binding transcription factor activity involved in positive regulation of transcription // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003712 // transcription cofactor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0035497 // cAMP response element binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation","chr2:208394615-208470713 (+) // 82.36 // q33.3"]
["11753936_x_at",-0.020229816,0.022972107,0.03611946,0.015058517,-0.16775608,-0.015058517,0.67691857,0.30859104,1.0488967,0.06887256,1.0488967,"up","TRPM2",7226.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0006816 // calcium ion transport // traceable author statement /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0006828 // manganese ion transport // inferred from electronic annotation /// 0033194 // response to hydroperoxide // inferred from electronic annotation /// 0035725 // sodium ion transmembrane transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0070588 // calcium ion transmembrane transport // traceable author statement /// 0070588 // calcium ion transmembrane transport // inferred from electronic annotation /// 0071421 // manganese ion transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005262 // calcium channel activity // inferred from electronic annotation /// 0005262 // calcium channel activity // traceable author statement /// 0005272 // sodium channel activity // inferred from electronic annotation /// 0005384 // manganese ion transmembrane transporter activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0047631 // ADP-ribose diphosphatase activity // inferred from electronic annotation","chr21:45770045-45862960 (+) // 98.3 // q22.3"]
["11751393_a_at",-0.080115795,0.08523798,0.0011444092,-0.0011444092,-0.023974419,0.018220425,0.97951907,0.93330824,1.0030464,0.0043883356,1.0030464,"up","PIK3IP1",113791.0,"0016310 // phosphorylation // inferred from electronic annotation /// 0033673 // negative regulation of kinase activity // inferred from sequence or structural similarity /// 0033673 // negative regulation of kinase activity // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0016301 // kinase activity // inferred from electronic annotation","chr22:31678573-31688445 (-) // 97.68 // q12.2"]
["11719439_at",0.17733002,0.0022630692,-0.0022630692,0.035996437,-0.11287451,-0.11287451,0.5737447,0.18810046,1.0885147,0.12236087,1.0885147,"up","SRGAP2",23380.0,"0003363 // lamellipodium assembly involved in ameboidal cell migration // inferred from mutant phenotype /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0008283 // cell proliferation // inferred from mutant phenotype /// 0021816 // extension of a leading process involved in cell motility in cerebral cortex radial glia guided migration // inferred from sequence or structural similarity /// 0032855 // positive regulation of Rac GTPase activity // inferred from direct assay /// 0032855 // positive regulation of Rac GTPase activity // inferred from mutant phenotype /// 0034446 // substrate adhesion-dependent cell spreading // inferred from mutant phenotype /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0046847 // filopodium assembly // inferred from direct assay /// 0048812 // neuron projection morphogenesis // inferred from sequence or structural similarity /// 0051014 // actin filament severing // inferred from direct assay /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement /// 0060548 // negative regulation of cell death // inferred from mutant phenotype /// 0060996 // dendritic spine development // inferred from direct assay /// 2001223 // negative regulation of neuron migration // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0014069 // postsynaptic density // inferred from sequence or structural similarity /// 0030027 // lamellipodium // inferred from direct assay /// 0044327 // dendritic spine head // inferred from direct assay /// 0045211 // postsynaptic membrane // inferred from sequence or structural similarity /// 0045335 // phagocytic vesicle // inferred from sequence or structural similarity","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0030675 // Rac GTPase activator activity // inferred from direct assay /// 0030675 // Rac GTPase activator activity // inferred from mutant phenotype /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0048365 // Rac GTPase binding // inferred from direct assay","chr1:206516199-206637776 (+) // 92.53 // q32.1"]
["11751110_a_at",-0.07899189,-0.045488358,0.02312231,0.04873848,-0.0025343895,0.0025348663,0.6044733,0.21725304,-1.0352881,-0.05003229,1.0352881,"down","FBXL2",25827.0,"0006464 // cellular protein modification process // traceable author statement /// 0006508 // proteolysis // traceable author statement /// 0016567 // protein ubiquitination // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation","0005737 // cytoplasm // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation","0004842 // ubiquitin-protein ligase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr3:33318942-33427515 (+) // 100.0 // p22.3"]
["11756657_a_at",-0.030642271,-0.017996073,0.16846561,-0.004504204,0.16846561,0.004504204,0.9535555,0.8587695,-1.0113013,-0.016212858,1.0113013,"down","RPS6KA2",6196.0,"0000089 // mitotic metaphase // inferred from electronic annotation /// 0001556 // oocyte maturation // inferred from electronic annotation /// 0002035 // brain renin-angiotensin system // inferred from electronic annotation /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0007243 // intracellular protein kinase cascade // traceable author statement /// 0007243 // intracellular protein kinase cascade // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007507 // heart development // inferred from electronic annotation /// 0008063 // Toll signaling pathway // traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0010659 // cardiac muscle cell apoptotic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from electronic annotation /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035556 // intracellular signal transduction // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0045087 // innate immune response // traceable author statement /// 0045786 // negative regulation of cell cycle // inferred from direct assay /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0060047 // heart contraction // inferred from electronic annotation /// 0070613 // regulation of protein processing // inferred from electronic annotation /// 0071322 // cellular response to carbohydrate stimulus // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004711 // ribosomal protein S6 kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:166825097-166958178 (-) // 99.75 // q27"]
["11751443_a_at",-0.2728076,-0.021642685,0.15341234,-0.092656136,0.05648327,0.021642685,0.9199537,0.76474416,-1.0296608,-0.04216918,1.0296608,"down","SH3BP5L",80851.0,"","","","chr1:249105898-249111272 (-) // 99.38 // q44"]
["11759216_at",-0.05316639,-0.035192966,0.16658592,0.035192966,0.057546616,-0.047370434,0.96554095,0.8942238,1.0076206,0.010952484,1.0076206,"up","PCDHB13",56123.0,"0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007416 // synapse assembly // traceable author statement /// 0016339 // calcium-dependent cell-cell adhesion // non-traceable author statement","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr5:140593299-140598551 (+) // 82.28 // q31.3"]
["11760361_x_at",-0.10410404,0.038101673,-0.0674417,-0.038101673,0.1310072,0.08505869,0.576976,0.19127406,-1.0746022,-0.103802755,1.0746022,"down","SULT1C4",27233.0,"0006805 // xenobiotic metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0050427 // 3'-phosphoadenosine 5'-phosphosulfate metabolic process // traceable author statement /// 0051923 // sulfation // inferred from direct assay","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0008146 // sulfotransferase activity // inferred from direct assay /// 0008146 // sulfotransferase activity // inferred from electronic annotation /// 0008146 // sulfotransferase activity // non-traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation","chr2:108994147-108999358 (+) // 84.17 // q12.3"]
["11725884_s_at",0.091294765,0.03788042,0.24893856,-0.10178709,-0.03788042,-0.09222031,0.32601476,0.037587896,1.1513559,0.20333381,1.1513559,"up","CNEP1R1",255919.0,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0010867 // positive regulation of triglyceride biosynthetic process // inferred from genetic interaction /// 0034504 // protein localization to nucleus // inferred from direct assay /// 0035307 // positive regulation of protein dephosphorylation // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from direct assay /// 0031965 // nuclear membrane // inferred from electronic annotation /// 0071595 // Nem1-Spo7 phosphatase complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr16:50059135-50070992 (+) // 83.14 // q12.1"]
["11731233_at",0.0027298927,-0.024467468,0.043049812,-0.0027298927,-0.08559561,0.049045563,0.8786858,0.6689636,1.0140982,0.020197315,1.0140982,"up","NTF4",4909.0,"0007402 // ganglion mother cell fate determination // inferred from sequence or structural similarity /// 0007402 // ganglion mother cell fate determination // inferred from electronic annotation /// 0007616 // long-term memory // inferred from sequence or structural similarity /// 0007616 // long-term memory // inferred from electronic annotation /// 0008052 // sensory organ boundary specification // inferred from sequence or structural similarity /// 0008052 // sensory organ boundary specification // inferred from electronic annotation /// 0008344 // adult locomotory behavior // inferred from sequence or structural similarity /// 0008344 // adult locomotory behavior // inferred from electronic annotation /// 0008544 // epidermis development // inferred from sequence or structural similarity /// 0008544 // epidermis development // inferred from electronic annotation","0005576 // extracellular region // inferred from sequence or structural similarity /// 0005576 // extracellular region // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // inferred from sequence or structural similarity","0005102 // receptor binding // inferred from electronic annotation /// 0008083 // growth factor activity // inferred from electronic annotation /// 0008083 // growth factor activity // traceable author statement","chr19:49564145-49567125 (-) // 95.76 // q13.33"]
["11717718_at",-0.020374298,-0.101026535,-0.0023422241,0.0023422241,0.0869751,0.051374435,0.43653503,0.086766526,-1.0630025,-0.08814494,1.0630025,"down","FNDC3B",64778.0,"0045600 // positive regulation of fat cell differentiation // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr3:171830240-172118493 (+) // 94.7 // q26.31"]
["11738225_at",-0.14591408,0.0027680397,-0.1548512,-0.0027680397,0.007809639,0.09570789,0.44232142,0.09068507,-1.0965074,-0.13291559,1.0965074,"down","IQCF1",132141.0,"","","","chr3:51928891-51937386 (-) // 97.46 // p21.2"]
["11730276_at",-0.0037162304,0.0037162304,-0.02282238,0.124512196,-0.122061014,0.07875776,0.88025326,0.6724105,-1.0243275,-0.034677073,1.0243275,"down","SULT2A1",6822.0,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0007586 // digestion // non-traceable author statement /// 0008202 // steroid metabolic process // traceable author statement /// 0008202 // steroid metabolic process // inferred from electronic annotation /// 0030573 // bile acid catabolic process // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0050427 // 3'-phosphoadenosine 5'-phosphosulfate metabolic process // traceable author statement /// 0051923 // sulfation // inferred from direct assay","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0005515 // protein binding // inferred from physical interaction /// 0008146 // sulfotransferase activity // inferred from direct assay /// 0008146 // sulfotransferase activity // traceable author statement /// 0008146 // sulfotransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0047704 // bile-salt sulfotransferase activity // inferred from electronic annotation","chr19:48373722-48389654 (-) // 78.19 // q13.33"]
["11736138_x_at",-0.03649378,-0.026762962,0.03160429,0.02201891,0.030084133,-0.02201891,0.79078656,0.4842697,-1.0143664,-0.020578846,1.0143664,"down","CTNNA2",1496.0,"0007155 // cell adhesion // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007409 // axonogenesis // inferred from sequence or structural similarity /// 0007409 // axonogenesis // inferred from electronic annotation /// 0016337 // cell-cell adhesion // inferred from sequence or structural similarity /// 0021942 // radial glia guided migration of Purkinje cell // inferred from sequence or structural similarity /// 0021942 // radial glia guided migration of Purkinje cell // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0042692 // muscle cell differentiation // traceable author statement /// 0048813 // dendrite morphogenesis // inferred from sequence or structural similarity /// 0048813 // dendrite morphogenesis // inferred from electronic annotation /// 0048854 // brain morphogenesis // inferred from sequence or structural similarity /// 0048854 // brain morphogenesis // inferred from electronic annotation /// 0051149 // positive regulation of muscle cell differentiation // traceable author statement /// 0051823 // regulation of synapse structural plasticity // inferred from sequence or structural similarity /// 0051823 // regulation of synapse structural plasticity // inferred from electronic annotation /// 0060134 // prepulse inhibition // inferred from sequence or structural similarity /// 0060134 // prepulse inhibition // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005912 // adherens junction // inferred from sequence or structural similarity /// 0005912 // adherens junction // inferred from electronic annotation /// 0005913 // cell-cell adherens junction // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030424 // axon // inferred from sequence or structural similarity /// 0030424 // axon // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005198 // structural molecule activity // inferred from electronic annotation /// 0005200 // structural constituent of cytoskeleton // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0045296 // cadherin binding // inferred from electronic annotation","chr2:79740037-80875904 (+) // 98.4 // p12"]
["11745288_a_at",-0.09676242,0.16351843,-0.12948656,0.13381839,0.024626017,-0.024626017,0.83024937,0.5623686,-1.0464594,-0.06551639,1.0464594,"down","NOX5",79400.0,"0000910 // cytokinesis // non-traceable author statement /// 0001525 // angiogenesis // inferred from direct assay /// 0001525 // angiogenesis // inferred from electronic annotation /// 0001935 // endothelial cell proliferation // inferred from direct assay /// 0006811 // ion transport // inferred from electronic annotation /// 0006917 // induction of apoptosis // non-traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008283 // cell proliferation // non-traceable author statement /// 0010155 // regulation of proton transport // non-traceable author statement /// 0015992 // proton transport // inferred from direct assay /// 0022900 // electron transport chain // inferred from electronic annotation /// 0042554 // superoxide anion generation // inferred from direct assay /// 0043012 // regulation of fusion of sperm to egg plasma membrane // non-traceable author statement /// 0050663 // cytokine secretion // non-traceable author statement /// 0055114 // oxidation-reduction process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 2000379 // positive regulation of reactive oxygen species metabolic process // inferred from direct assay","0001669 // acrosomal vesicle // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0015252 // hydrogen ion channel activity // inferred from direct assay /// 0016175 // superoxide-generating NADPH oxidase activity // inferred from direct assay /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0020037 // heme binding // non-traceable author statement /// 0050660 // flavin adenine dinucleotide binding // non-traceable author statement /// 0050661 // NADP binding // non-traceable author statement","chr15:69222869-69349500 (+) // 63.17 // q23"]
["11739952_a_at",0.0030441284,0.0052342415,-0.029304028,-0.0030436516,-0.013675213,0.113238335,0.74266934,0.40525195,-1.0275309,-0.03918179,1.0275309,"down","GFOD1",54438.0,"0008152 // metabolic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation","chr6:13363503-13487894 (-) // 98.24 // p24.1"]
["11754406_a_at",0.0052165985,-0.006839752,0.038205147,0.007698059,-0.08125305,-0.0052165985,0.6550999,0.28053576,1.0270107,0.038451184,1.0270107,"up","LONP2",83752.0,"0006465 // signal peptide processing // inferred from mutant phenotype /// 0006508 // proteolysis // inferred from electronic annotation /// 0006515 // misfolded or incompletely synthesized protein catabolic process // not recorded /// 0006625 // protein targeting to peroxisome // non-traceable author statement /// 0007031 // peroxisome organization // non-traceable author statement /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0031998 // regulation of fatty acid beta-oxidation // inferred from mutant phenotype","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005777 // peroxisome // inferred from direct assay /// 0005777 // peroxisome // inferred from electronic annotation /// 0005782 // peroxisomal matrix // not recorded /// 0005782 // peroxisomal matrix // inferred from electronic annotation /// 0009295 // nucleoid // not recorded","0000166 // nucleotide binding // inferred from electronic annotation /// 0002020 // protease binding // inferred from physical interaction /// 0004176 // ATP-dependent peptidase activity // not recorded /// 0004176 // ATP-dependent peptidase activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // not recorded /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // not recorded /// 0005524 // ATP binding // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from direct assay /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // not recorded","chr16:48286219-48385913 (+) // 99.28 // q12.1"]
["11715853_a_at",-0.096297264,0.035245895,0.120511055,-0.13135529,0.09332991,-0.035245895,0.87047976,0.6509576,1.0311425,0.044243682,1.0311425,"up","PDGFRB",5159.0,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0001822 // kidney development // inferred from electronic annotation /// 0001894 // tissue homeostasis // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006807 // nitrogen compound metabolic process // inferred from electronic annotation /// 0006935 // chemotaxis // inferred from electronic annotation /// 0007165 // signal transduction // inferred from direct assay /// 0007165 // signal transduction // inferred from electronic annotation /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0010863 // positive regulation of phospholipase C activity // inferred from direct assay /// 0014068 // positive regulation of phosphatidylinositol 3-kinase cascade // inferred from sequence or structural similarity /// 0014911 // positive regulation of smooth muscle cell migration // inferred from mutant phenotype /// 0014911 // positive regulation of smooth muscle cell migration // inferred from sequence or structural similarity /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016477 // cell migration // inferred from mutant phenotype /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0030325 // adrenal gland development // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0032516 // positive regulation of phosphoprotein phosphatase activity // inferred from direct assay /// 0032956 // regulation of actin cytoskeleton organization // inferred from sequence or structural similarity /// 0035441 // cell migration involved in vasculogenesis // inferred from sequence or structural similarity /// 0035791 // platelet-derived growth factor receptor-beta signaling pathway // inferred from direct assay /// 0035791 // platelet-derived growth factor receptor-beta signaling pathway // inferred from mutant phenotype /// 0035793 // positive regulation of metanephric mesenchymal cell migration by platelet-derived growth factor receptor-beta signaling pathway // inferred from sequence or structural similarity /// 0035909 // aorta morphogenesis // inferred from sequence or structural similarity /// 0036120 // cellular response to platelet-derived growth factor stimulus // traceable author statement /// 0038084 // vascular endothelial growth factor signaling pathway // inferred from electronic annotation /// 0038091 // positive regulation of cell proliferation by VEGF-activated platelet derived growth factor receptor signaling pathway // inferred from direct assay /// 0043406 // positive regulation of MAP kinase activity // inferred from sequence or structural similarity /// 0043552 // positive regulation of phosphatidylinositol 3-kinase activity // inferred from direct assay /// 0045840 // positive regulation of mitosis // inferred from sequence or structural similarity /// 0046488 // phosphatidylinositol metabolic process // inferred from mutant phenotype /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from direct assay /// 0048008 // platelet-derived growth factor receptor signaling pathway // traceable author statement /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from electronic annotation /// 0048010 // vascular endothelial growth factor receptor signaling pathway // inferred from electronic annotation /// 0048015 // phosphatidylinositol-mediated signaling // inferred from mutant phenotype /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from mutant phenotype /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from sequence or structural similarity /// 0048705 // skeletal system morphogenesis // inferred from electronic annotation /// 0048745 // smooth muscle tissue development // inferred from electronic annotation /// 0050730 // regulation of peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0050921 // positive regulation of chemotaxis // inferred from sequence or structural similarity /// 0055003 // cardiac myofibril assembly // inferred from sequence or structural similarity /// 0060326 // cell chemotaxis // inferred from direct assay /// 0060981 // cell migration involved in coronary angiogenesis // inferred from sequence or structural similarity /// 0061298 // retina vasculature development in camera-type eye // inferred from sequence or structural similarity /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from mutant phenotype /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from sequence or structural similarity /// 0071670 // smooth muscle cell chemotaxis // inferred from sequence or structural similarity /// 0072262 // metanephric glomerular mesangial cell proliferation involved in metanephros development // inferred from sequence or structural similarity /// 0072277 // metanephric glomerular capillary formation // inferred from sequence or structural similarity /// 0090280 // positive regulation of calcium ion import // inferred from sequence or structural similarity /// 2000379 // positive regulation of reactive oxygen species metabolic process // inferred from sequence or structural similarity /// 2000573 // positive regulation of DNA biosynthetic process // inferred from sequence or structural similarity","0005634 // nucleus // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005764 // lysosome // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from sequence or structural similarity /// 0031226 // intrinsic to plasma membrane // inferred from direct assay /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043202 // lysosomal lumen // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004992 // platelet activating factor receptor activity // traceable author statement /// 0005017 // platelet-derived growth factor-activated receptor activity // traceable author statement /// 0005019 // platelet-derived growth factor beta-receptor activity // inferred from direct assay /// 0005019 // platelet-derived growth factor beta-receptor activity // inferred from mutant phenotype /// 0005021 // vascular endothelial growth factor-activated receptor activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from physical interaction /// 0005161 // platelet-derived growth factor receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0038085 // vascular endothelial growth factor binding // inferred from physical interaction /// 0048407 // platelet-derived growth factor binding // inferred from direct assay /// 0048407 // platelet-derived growth factor binding // inferred from physical interaction","chr5:149493401-149535469 (-) // 95.29 // q32"]
["11746640_a_at",0.033197403,-0.062526226,-0.14364171,0.010122776,-0.010122776,0.0769186,0.6068114,0.22086106,-1.059436,-0.08329639,1.059436,"down","RASSF2",9770.0,"0007049 // cell cycle // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr20:4760675-4803050 (-) // 92.98 // p13"]
["11723144_at",-0.060013294,-0.30571628,-0.0362916,0.0362916,0.18455553,0.09446192,0.40286347,0.06803699,-1.1802644,-0.23911002,1.1802644,"down","NALCN",259232.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0035725 // sodium ion transmembrane transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005272 // sodium channel activity // inferred from electronic annotation","chr13:101706128-102068825 (-) // 98.67 // q33.1"]
["11759008_at",0.023364782,0.03547907,-0.21652651,0.35476756,-0.13750029,-0.023364544,0.8130416,0.5282416,-1.084624,-0.11719507,1.084624,"down","TBX4",9496.0,"0001525 // angiogenesis // inferred from electronic annotation /// 0002009 // morphogenesis of an epithelium // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // non-traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0030326 // embryonic limb morphogenesis // inferred from electronic annotation /// 0035108 // limb morphogenesis // inferred from mutant phenotype /// 0035108 // limb morphogenesis // inferred from electronic annotation /// 0048705 // skeletal system morphogenesis // inferred from mutant phenotype","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation","chr17:59529778-59562471 (+) // 93.46 // q23.2"]
["11753659_x_at",-0.0172081,-0.014652252,-0.027750015,0.037197113,0.017680168,0.014652252,0.16595238,0.0060886443,-1.0302873,-0.043046646,1.0302873,"down","RPL30",6156.0,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0007059 // chromosome segregation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral infectious cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0003735 // structural constituent of ribosome // traceable author statement /// 0003735 // structural constituent of ribosome // inferred from electronic annotation","chr8:99053948-99057767 (-) // 95.53 // q22.2"]
["11724027_s_at",0.021164417,0.063705444,0.0023107529,-0.083649635,-0.07817888,-0.0023107529,0.38128227,0.058508463,1.0597862,0.08377325,1.0597862,"up","PPP6R3",55291.0,"0043666 // regulation of phosphoprotein phosphatase activity // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0019903 // protein phosphatase binding // inferred from physical interaction","chr11:68228192-68382802 (+) // 96.16 // q13.2"]
["11748837_a_at",0.02908659,0.07720518,0.102297306,-0.02908659,-0.09136152,-0.113661766,0.20638274,0.011285348,1.1076993,0.14756626,1.1076993,"up","RAB30",27314.0,"0006184 // GTP catabolic process // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0005795 // Golgi stack // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0005525 // GTP binding // inferred from electronic annotation","chr11:82692831-82745675 (-) // 99.93 // q14.1"]
["11724048_a_at",-0.18725872,-0.006245613,0.015526772,-0.012142181,0.006245613,0.11350441,0.6499058,0.27466205,-1.0682099,-0.09519514,1.0682099,"down","COG6",57511.0,"0006810 // transport // inferred from electronic annotation /// 0006891 // intra-Golgi vesicle-mediated transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0070085 // glycosylation // inferred from mutant phenotype","0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0017119 // Golgi transport complex // inferred from direct assay /// 0017119 // Golgi transport complex // inferred from electronic annotation","","chr13:40229763-40326765 (+) // 93.59 // q14.11"]
["11722310_a_at",-0.03081894,0.1873107,-0.013194561,0.013194561,-0.039958954,0.1230917,0.95505345,0.8625769,1.0109115,0.015656652,1.0109115,"up","TMC4",147798.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr19:54663845-54676944 (-) // 91.04 // q13.42"]
["11757328_x_at",-0.0053424835,-0.00746727,-0.03878212,0.019284248,0.0053424835,0.013716698,0.38603902,0.0602485,-1.0209968,-0.029978357,1.0209968,"down","RPL27",6155.0,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral infectious cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003735 // structural constituent of ribosome // non-traceable author statement /// 0003735 // structural constituent of ribosome // traceable author statement /// 0003735 // structural constituent of ribosome // inferred from electronic annotation","chr17:41150471-41154961 (+) // 76.69 // q21.31"]
["11742973_at",0.0011062622,0.03778267,-0.0011062622,-0.03385067,-0.011899948,0.004009247,0.5736769,0.1880083,1.0185438,0.026508076,1.0185438,"up","ACAT1",38.0,"0001889 // liver development // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009083 // branched chain family amino acid catabolic process // traceable author statement /// 0009725 // response to hormone stimulus // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042594 // response to starvation // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046950 // cellular ketone body metabolic process // traceable author statement /// 0046951 // ketone body biosynthetic process // traceable author statement /// 0046952 // ketone body catabolic process // traceable author statement /// 0051260 // protein homooligomerization // inferred from electronic annotation /// 0060612 // adipose tissue development // inferred from electronic annotation /// 0072229 // metanephric proximal convoluted tubule development // inferred from electronic annotation","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement /// 0005759 // mitochondrial matrix // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0003985 // acetyl-CoA C-acetyltransferase activity // not recorded /// 0003985 // acetyl-CoA C-acetyltransferase activity // inferred from electronic annotation /// 0003985 // acetyl-CoA C-acetyltransferase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0016747 // transferase activity, transferring acyl groups other than amino-acyl groups // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050662 // coenzyme binding // inferred from electronic annotation","chr11:107992242-108019001 (+) // 99.6 // q22.3"]
["11751645_x_at",0.0068717003,-0.1167078,-0.19852638,-0.0068717003,0.109074116,0.04973507,0.43891245,0.088452846,-1.1122131,-0.15343328,1.1122131,"down","PBXIP1",57326.0,"0007275 // multicellular organismal development // non-traceable author statement /// 0030154 // cell differentiation // non-traceable author statement /// 0045892 // negative regulation of transcription, DNA-dependent // non-traceable author statement /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // non-traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003714 // transcription corepressor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr1:154918045-154928603 (-) // 99.8 // q21.3"]
["11757133_s_at",0.043292046,0.038316727,0.037878036,-0.065761566,-0.08365536,-0.037878036,0.105804704,0.0015977183,1.0734541,0.10226056,1.0734541,"up","MIR1304 /// SNORA1 /// SNORA18 /// SNORA32 /// SNORA40 /// SNORA8 /// SNORD5 /// TAF1D","100302240 /// 654320 /// 677792 /// 677805 /// 677822 /// 692063 /// 692072 /// 79101","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr11:93465526-93465665 (-) // 100.0 // q21"]
["11740560_x_at",-0.07174587,0.004216671,0.020026207,-0.0015296936,-0.2210474,0.0015301704,0.80033785,0.5043272,1.0409119,0.057847984,1.0409119,"up","NSMAF",8439.0,"0006672 // ceramide metabolic process // traceable author statement /// 0007165 // signal transduction // traceable author statement","0005625 // soluble fraction // traceable author statement /// 0005737 // cytoplasm // traceable author statement","0005057 // receptor signaling protein activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr8:59496065-59572942 (-) // 72.29 // q12.1"]
["11721474_a_at",0.013884544,-0.05025983,-0.007623434,0.0076231956,-0.0770421,0.06856918,0.9227449,0.7712799,-1.0100194,-0.014383035,1.0100194,"down","GPM6B",2824.0,"0001503 // ossification // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // non-traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030501 // positive regulation of bone mineralization // inferred from mutant phenotype /// 0032956 // regulation of actin cytoskeleton organization // inferred from mutant phenotype /// 0051612 // negative regulation of serotonin uptake // inferred from sequence or structural similarity /// 0051893 // regulation of focal adhesion assembly // inferred from mutant phenotype /// 0085029 // extracellular matrix assembly // inferred from mutant phenotype /// 2000009 // negative regulation of protein localization at cell surface // inferred from sequence or structural similarity","0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0045121 // membrane raft // inferred from sequence or structural similarity","","chrX:13790459-13835314 (-) // 98.71 // p22.2"]
["11737060_a_at",0.076218605,-0.19752288,4.9233437E-4,-4.925728E-4,0.085641384,-0.053456783,0.85103625,0.6066695,-1.035864,-0.050834596,1.035864,"down","MTMR3",8897.0,"0006470 // protein dephosphorylation // inferred from direct assay /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from direct assay /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation /// 0046856 // phosphatidylinositol dephosphorylation // inferred from direct assay","0005624 // membrane fraction // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0004438 // phosphatidylinositol-3-phosphatase activity // inferred from direct assay /// 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004722 // protein serine/threonine phosphatase activity // inferred from direct assay /// 0004725 // protein tyrosine phosphatase activity // inferred from direct assay /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr22:30279157-30426855 (+) // 99.68 // q12.2"]
["11756569_a_at",0.011734009,0.02018547,0.047463417,-0.016593933,-0.011734009,-0.04520607,0.2883028,0.02737403,1.0359628,0.050972227,1.0359628,"up","NUSAP1",51203.0,"0000070 // mitotic sister chromatid segregation // inferred from direct assay /// 0000281 // cytokinesis after mitosis // inferred from direct assay /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0007076 // mitotic chromosome condensation // inferred from direct assay /// 0040001 // establishment of mitotic spindle localization // inferred from direct assay /// 0045840 // positive regulation of mitosis // inferred from direct assay /// 0051301 // cell division // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation","chr15:41625050-41672424 (+) // 98.2 // q15.1"]
["11740405_at",0.07790303,-0.027504683,0.05862212,0.02363944,-0.02363944,-0.037621498,0.6393094,0.26054415,1.034462,0.048880614,1.034462,"up","LHX4",89884.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from electronic annotation /// 0008045 // motor axon guidance // inferred from electronic annotation /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0021526 // medial motor column neuron differentiation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:180199441-180244188 (+) // 96.61 // q25.2"]
["11753167_a_at",-0.0054712296,-0.019760132,0.044496536,-0.029594898,0.0054712296,0.047802925,0.98882514,0.9628216,-1.0010204,-0.0014714209,1.0010204,"down","SYPL2",284612.0,"0006810 // transport // inferred from electronic annotation /// 0006874 // cellular calcium ion homeostasis // inferred from electronic annotation","0008021 // synaptic vesicle // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation","chr1:110009179-110022410 (+) // 94.19 // p13.3"]
["11752292_s_at",-0.022825241,0.009354591,0.022143364,-0.009637833,0.04146862,-0.0093541145,0.9480273,0.84189165,-1.0031945,-0.0046012737,1.0031945,"down","KAT7",11143.0,"0006260 // DNA replication // inferred from direct assay /// 0006260 // DNA replication // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0016573 // histone acetylation // inferred from electronic annotation /// 0043966 // histone H3 acetylation // inferred from direct assay /// 0043981 // histone H4-K5 acetylation // inferred from direct assay /// 0043982 // histone H4-K8 acetylation // inferred from direct assay /// 0043983 // histone H4-K12 acetylation // inferred from direct assay /// 0043984 // histone H4-K16 acetylation // inferred from direct assay","0000123 // histone acetyltransferase complex // inferred from direct assay /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay","0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0004402 // histone acetyltransferase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0016747 // transferase activity, transferring acyl groups other than amino-acyl groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:47867014-47905181 (+) // 90.98 // q21.33"]
["11717445_a_at",0.06514835,-0.0055704117,-0.053721428,0.032369614,-0.019481659,0.0055704117,0.97390056,0.9164876,-1.0029159,-0.0042005745,1.0029159,"down","DHPS",1725.0,"0006412 // translation // traceable author statement /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0008612 // peptidyl-lysine modification to hypusine // traceable author statement /// 0008612 // peptidyl-lysine modification to hypusine // inferred from electronic annotation /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0050983 // deoxyhypusine biosynthetic process from spermidine // inferred from electronic annotation /// 0050983 // deoxyhypusine biosynthetic process from spermidine // traceable author statement /// 0051289 // protein homotetramerization // inferred from electronic annotation","0005829 // cytosol // traceable author statement","0005515 // protein binding // inferred from physical interaction /// 0016740 // transferase activity // inferred from electronic annotation /// 0034038 // deoxyhypusine synthase activity // traceable author statement /// 0034038 // deoxyhypusine synthase activity // inferred from electronic annotation","chr19:12786530-12792716 (-) // 92.66 // p13.2"]
["11761699_at",0.0,-0.033960342,0.0,0.4612782,0.3802395,-0.10407996,0.6058669,0.21966678,-1.1951011,-0.2571327,1.1951011,"down","MAD2L1",4085.0,"0000070 // mitotic sister chromatid segregation // inferred from electronic annotation /// 0000075 // cell cycle checkpoint // traceable author statement /// 0000087 // M phase of mitotic cell cycle // traceable author statement /// 0000236 // mitotic prometaphase // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0007093 // mitotic cell cycle checkpoint // inferred from direct assay /// 0007094 // mitotic cell cycle spindle assembly checkpoint // traceable author statement /// 0007094 // mitotic cell cycle spindle assembly checkpoint // inferred from electronic annotation /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0042177 // negative regulation of protein catabolic process // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0060564 // negative regulation of mitotic anaphase-promoting complex activity // inferred from direct assay /// 0090267 // positive regulation of mitotic cell cycle spindle assembly checkpoint // inferred from mutant phenotype /// 0090267 // positive regulation of mitotic cell cycle spindle assembly checkpoint // inferred from electronic annotation","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from direct assay /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0000922 // spindle pole // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005643 // nuclear pore // inferred from direct assay /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction","chr4:120980668-120987922 (-) // 84.01 // q27"]
["11735356_a_at",-0.15997171,0.17247963,0.20278835,-0.11317921,-0.005918741,0.005918741,0.7531871,0.42095834,1.0788481,0.10949178,1.0788481,"up","HTR4",3360.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007187 // G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger // traceable author statement /// 0007210 // serotonin receptor signaling pathway // inferred from direct assay /// 0007210 // serotonin receptor signaling pathway // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype","0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004993 // serotonin receptor activity // inferred from direct assay /// 0004993 // serotonin receptor activity // traceable author statement","chr5:147861098-148033741 (-) // 93.17 // q32"]
["11742295_x_at",0.105844975,0.22771001,-0.03439665,-0.065638065,0.03439665,-0.23077822,0.5430556,0.15896428,1.1384408,0.18705933,1.1384408,"up","TEX14",56155.0,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0007094 // mitotic cell cycle spindle assembly checkpoint // inferred from sequence or structural similarity /// 0007140 // male meiosis // inferred from sequence or structural similarity /// 0008608 // attachment of spindle microtubules to kinetochore // inferred from sequence or structural similarity /// 0032091 // negative regulation of protein binding // inferred from electronic annotation /// 0032466 // negative regulation of cytokinesis // inferred from electronic annotation /// 0043063 // intercellular bridge organization // inferred from sequence or structural similarity /// 0051301 // cell division // inferred from electronic annotation /// 0051306 // mitotic sister chromatid separation // inferred from sequence or structural similarity","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from sequence or structural similarity /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0005623 // cell // inferred from sequence or structural similarity /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0030496 // midbody // inferred from sequence or structural similarity /// 0030496 // midbody // inferred from electronic annotation /// 0045171 // intercellular bridge // inferred from sequence or structural similarity /// 0045171 // intercellular bridge // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction","chr17:56737937-56769392 (-) // 94.5 // q22"]
["11739912_a_at",-0.010438919,0.024419785,0.0019779205,-0.0019779205,-0.035782814,0.006702423,0.7369193,0.39578506,1.0109224,0.015672304,1.0109224,"up","TSEN15",116461.0,"0006397 // mRNA processing // inferred from electronic annotation /// 0008033 // tRNA processing // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation","0004519 // endonuclease activity // inferred from electronic annotation","chr1:184020810-184043342 (+) // 87.93 // q25.3"]
["11761194_at",0.09514356,-0.11235285,-0.14275241,-0.06826091,0.17665887,0.06826091,0.69811964,0.33720154,-1.0808804,-0.1122069,1.0808804,"down","TGOLN2",10618.0,"","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005802 // trans-Golgi network // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030133 // transport vesicle // traceable author statement","0005515 // protein binding // inferred from physical interaction","chr2:85551366-85555093 (-) // 61.38 // p11.2"]
["11733948_at",-0.1144824,0.1244812,0.022036552,0.13835335,-0.022036552,-0.09429121,0.99262154,0.9743546,1.0023154,0.0033365577,1.0023154,"up","PAX9",5083.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // non-traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007492 // endoderm development // inferred from electronic annotation /// 0042476 // odontogenesis // inferred from electronic annotation /// 0042481 // regulation of odontogenesis // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0060325 // face morphogenesis // inferred from electronic annotation /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr14:37126772-37147012 (+) // 99.46 // q13.3"]
["11733440_a_at",-0.03714466,-0.18041277,0.09565687,-0.11795759,0.037145138,0.041763306,0.92824227,0.7866841,-1.0193272,-0.027617173,1.0193272,"down","TH",7054.0,"0001666 // response to hypoxia // inferred from direct assay /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001963 // synaptic transmission, dopaminergic // inferred from sequence or structural similarity /// 0001963 // synaptic transmission, dopaminergic // inferred from electronic annotation /// 0001975 // response to amphetamine // inferred from electronic annotation /// 0003007 // heart morphogenesis // non-traceable author statement /// 0006585 // dopamine biosynthetic process from tyrosine // non-traceable author statement /// 0006585 // dopamine biosynthetic process from tyrosine // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006665 // sphingolipid metabolic process // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0007507 // heart development // inferred from sequence or structural similarity /// 0007507 // heart development // inferred from electronic annotation /// 0007601 // visual perception // inferred from sequence or structural similarity /// 0007601 // visual perception // inferred from electronic annotation /// 0007605 // sensory perception of sound // inferred from electronic annotation /// 0007612 // learning // inferred from sequence or structural similarity /// 0007612 // learning // inferred from electronic annotation /// 0007613 // memory // inferred from sequence or structural similarity /// 0007613 // memory // inferred from electronic annotation /// 0007617 // mating behavior // inferred from electronic annotation /// 0007626 // locomotory behavior // inferred from sequence or structural similarity /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0008016 // regulation of heart contraction // inferred from sequence or structural similarity /// 0008016 // regulation of heart contraction // inferred from electronic annotation /// 0009072 // aromatic amino acid family metabolic process // inferred from electronic annotation /// 0009414 // response to water deprivation // inferred from electronic annotation /// 0009416 // response to light stimulus // inferred from electronic annotation /// 0009635 // response to herbicide // inferred from electronic annotation /// 0009651 // response to salt stress // inferred from electronic annotation /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0009887 // organ morphogenesis // inferred from sequence or structural similarity /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0010038 // response to metal ion // inferred from electronic annotation /// 0010043 // response to zinc ion // inferred from electronic annotation /// 0010259 // multicellular organismal aging // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0014823 // response to activity // inferred from electronic annotation /// 0015842 // synaptic vesicle amine transport // inferred from electronic annotation /// 0017085 // response to insecticide // inferred from electronic annotation /// 0018963 // phthalate metabolic process // inferred from electronic annotation /// 0021987 // cerebral cortex development // inferred from electronic annotation /// 0031667 // response to nutrient levels // inferred from electronic annotation /// 0032355 // response to estradiol stimulus // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0033076 // isoquinoline alkaloid metabolic process // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0035094 // response to nicotine // inferred from electronic annotation /// 0035176 // social behavior // inferred from electronic annotation /// 0035690 // cellular response to drug // inferred from electronic annotation /// 0042136 // neurotransmitter biosynthetic process // inferred from electronic annotation /// 0042214 // terpene metabolic process // inferred from electronic annotation /// 0042416 // dopamine biosynthetic process // inferred from direct assay /// 0042416 // dopamine biosynthetic process // inferred from electronic annotation /// 0042418 // epinephrine biosynthetic process // inferred from direct assay /// 0042421 // norepinephrine biosynthetic process // inferred from direct assay /// 0042423 // catecholamine biosynthetic process // traceable author statement /// 0042423 // catecholamine biosynthetic process // inferred from electronic annotation /// 0042462 // eye photoreceptor cell development // inferred from sequence or structural similarity /// 0042462 // eye photoreceptor cell development // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042745 // circadian sleep/wake cycle // inferred from electronic annotation /// 0042755 // eating behavior // inferred from electronic annotation /// 0043434 // response to peptide hormone stimulus // inferred from electronic annotation /// 0043473 // pigmentation // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045471 // response to ethanol // inferred from direct assay /// 0045471 // response to ethanol // inferred from electronic annotation /// 0045472 // response to ether // inferred from electronic annotation /// 0046684 // response to pyrethroid // inferred from electronic annotation /// 0048545 // response to steroid hormone stimulus // inferred from electronic annotation /// 0048596 // embryonic camera-type eye morphogenesis // inferred from sequence or structural similarity /// 0048596 // embryonic camera-type eye morphogenesis // inferred from electronic annotation /// 0050890 // cognition // inferred from electronic annotation /// 0051412 // response to corticosterone stimulus // inferred from electronic annotation /// 0051602 // response to electrical stimulus // inferred from electronic annotation /// 0052314 // phytoalexin metabolic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0070848 // response to growth factor stimulus // inferred from electronic annotation /// 0071287 // cellular response to manganese ion // inferred from electronic annotation /// 0071312 // cellular response to alkaloid // inferred from electronic annotation /// 0071316 // cellular response to nicotine // inferred from electronic annotation /// 0071333 // cellular response to glucose stimulus // inferred from electronic annotation /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005790 // smooth endoplasmic reticulum // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0009898 // internal side of plasma membrane // inferred from direct assay /// 0019717 // synaptosome // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from direct assay /// 0033162 // melanosome membrane // inferred from direct assay /// 0043005 // neuron projection // inferred from direct assay /// 0043005 // neuron projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043195 // terminal button // inferred from electronic annotation /// 0043204 // perikaryon // inferred from sequence or structural similarity /// 0043204 // perikaryon // inferred from electronic annotation","0004497 // monooxygenase activity // inferred from electronic annotation /// 0004511 // tyrosine 3-monooxygenase activity // inferred from direct assay /// 0004511 // tyrosine 3-monooxygenase activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008198 // ferrous iron binding // inferred from electronic annotation /// 0008199 // ferric iron binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016597 // amino acid binding // inferred from electronic annotation /// 0016714 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced pteridine as one donor, and incorporation of one atom of oxygen // inferred from electronic annotation /// 0019825 // oxygen binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0034617 // tetrahydrobiopterin binding // inferred from electronic annotation /// 0035240 // dopamine binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:2185158-2193035 (-) // 98.91 // p15.5"]
["11743729_at",0.11531639,0.11531639,0.05897045,-0.071175575,-0.0862875,-0.05897045,0.09540138,0.0011621872,1.1240287,0.16867885,1.1240287,"up","CCDC47",57003.0,"0006983 // ER overload response // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0055074 // calcium ion homeostasis // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr17:61822614-61851135 (-) // 95.13 // q23.3"]
["11743557_a_at",-0.02174139,0.02174139,0.092570305,-0.027769089,-0.08370924,0.059749126,0.7517241,0.41871753,1.0339023,0.048099846,1.0339023,"up","PPP1R3F",89801.0,"0005979 // regulation of glycogen biosynthetic process // inferred from direct assay /// 2000465 // regulation of glycogen (starch) synthase activity // inferred from direct assay","0005624 // membrane fraction // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0019903 // protein phosphatase binding // inferred from physical interaction /// 2001069 // glycogen binding // inferred from direct assay","chrX:49126316-49144077 (+) // 94.56 // p11.23"]
["11724388_at",-0.034256935,0.022941113,0.054147243,-0.025186539,0.06274557,-0.02294159,0.94046783,0.82053655,1.0065401,0.009404592,1.0065401,"up","ZNF721",170960.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr4:433191-493442 (-) // 91.78 // p16.3"]
["11729534_a_at",-0.06458378,-0.027153969,0.007836342,0.03623295,0.07691288,-0.007836342,0.49412388,0.1216346,-1.0446867,-0.06307031,1.0446867,"down","BRE",9577.0,"0006281 // DNA repair // inferred from electronic annotation /// 0006302 // double-strand break repair // inferred from mutant phenotype /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from expression pattern /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0010212 // response to ionizing radiation // inferred from mutant phenotype /// 0016568 // chromatin modification // inferred from electronic annotation /// 0031572 // G2/M transition DNA damage checkpoint // inferred from mutant phenotype /// 0045739 // positive regulation of DNA repair // inferred from mutant phenotype /// 0045768 // positive regulation of anti-apoptosis // inferred from direct assay","0000152 // nuclear ubiquitin ligase complex // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0070531 // BRCA1-A complex // inferred from direct assay /// 0070552 // BRISC complex // inferred from direct assay","0000268 // peroxisome targeting sequence binding // traceable author statement /// 0005164 // tumor necrosis factor receptor binding // inferred from direct assay /// 0005164 // tumor necrosis factor receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0031593 // polyubiquitin binding // inferred from direct assay","chr2:28113556-28561765 (+) // 98.63 // p23.2"]
["11729299_a_at",-0.014960289,0.008458614,0.0019555092,-0.06879187,-0.0019555092,0.042886734,0.9426029,0.82635754,1.0054014,0.007771564,1.0054014,"up","SDE2",163859.0,"","","","chr1:226170852-226187178 (-) // 40.65 // q42.12"]
["11749673_x_at",0.012335777,-0.042754173,0.04197502,-0.012335777,0.038118362,-0.0852232,0.8545979,0.61583525,1.0165391,0.023665704,1.0165391,"up","CTNNA1",1495.0,"0001541 // ovarian follicle development // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // non-traceable author statement /// 0007163 // establishment or maintenance of cell polarity // inferred from electronic annotation /// 0007406 // negative regulation of neuroblast proliferation // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0008584 // male gonad development // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0016264 // gap junction assembly // inferred from electronic annotation /// 0031103 // axon regeneration // inferred from electronic annotation /// 0034329 // cell junction assembly // traceable author statement /// 0034332 // adherens junction organization // traceable author statement /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042475 // odontogenesis of dentin-containing tooth // inferred from electronic annotation /// 0042692 // muscle cell differentiation // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043297 // apical junction assembly // inferred from electronic annotation /// 0043297 // apical junction assembly // non-traceable author statement /// 0043627 // response to estrogen stimulus // inferred from electronic annotation /// 0045216 // cell-cell junction organization // traceable author statement /// 0045880 // positive regulation of smoothened signaling pathway // inferred from electronic annotation /// 0051149 // positive regulation of muscle cell differentiation // traceable author statement /// 0071681 // cellular response to indole-3-methanol // inferred from direct assay","0001669 // acrosomal vesicle // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from direct assay /// 0005911 // cell-cell junction // inferred from electronic annotation /// 0005912 // adherens junction // inferred from electronic annotation /// 0005913 // cell-cell adherens junction // inferred from electronic annotation /// 0005915 // zonula adherens // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016342 // catenin complex // inferred from direct assay /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","0005198 // structural molecule activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008013 // beta-catenin binding // inferred from physical interaction /// 0017166 // vinculin binding // inferred from physical interaction /// 0045295 // gamma-catenin binding // inferred from physical interaction /// 0045296 // cadherin binding // inferred from electronic annotation /// 0045296 // cadherin binding // inferred from physical interaction /// 0051015 // actin filament binding // inferred from electronic annotation","chr5:138211341-138270717 (+) // 98.82 // q31.2"]
["11756640_a_at",0.06424475,0.12402201,0.059874535,-0.08917427,-0.09355879,-0.059874535,0.11455932,0.0021462354,1.1200653,0.16358288,1.1200653,"up","LRWD1 /// MIR4467","100616367 /// 222229","0000080 // G1 phase of mitotic cell cycle // inferred from mutant phenotype /// 0006260 // DNA replication // inferred from electronic annotation /// 0006270 // DNA-dependent DNA replication initiation // traceable author statement /// 0006325 // chromatin organization // inferred from mutant phenotype /// 0016568 // chromatin modification // inferred from electronic annotation /// 0071169 // establishment of protein localization to chromatin // inferred from direct assay","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000781 // chromosome, telomeric region // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005664 // nuclear origin of replication recognition complex // inferred from direct assay /// 0005694 // chromosome // inferred from electronic annotation /// 0005721 // centromeric heterochromatin // inferred from direct assay /// 0031933 // telomeric heterochromatin // inferred from direct assay","0003682 // chromatin binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008327 // methyl-CpG binding // inferred from direct assay /// 0035064 // methylated histone residue binding // inferred from direct assay","chr7:102105402-102113582 (+) // 99.4 // q22.1"]
["11752827_a_at",-0.022547722,-0.020441532,-0.10586882,0.23629093,0.020441532,0.15123463,0.37026322,0.054195832,-1.1372964,-0.18560834,1.1372964,"down","PXN",5829.0,"0000187 // activation of MAPK activity // inferred from electronic annotation /// 0006928 // cellular component movement // inferred from electronic annotation /// 0006936 // muscle contraction // traceable author statement /// 0007010 // cytoskeleton organization // inferred from electronic annotation /// 0007155 // cell adhesion // non-traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007160 // cell-matrix adhesion // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007172 // signal complex assembly // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007229 // integrin-mediated signaling pathway // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0030032 // lamellipodium assembly // inferred from electronic annotation /// 0034329 // cell junction assembly // traceable author statement /// 0034614 // cellular response to reactive oxygen species // inferred from expression pattern /// 0048041 // focal adhesion assembly // inferred from electronic annotation /// 0048754 // branching morphogenesis of a tube // inferred from electronic annotation /// 0060396 // growth hormone receptor signaling pathway // inferred from direct assay","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005875 // microtubule associated complex // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005925 // focal adhesion // inferred from direct assay /// 0005925 // focal adhesion // inferred from electronic annotation /// 0005938 // cell cortex // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from direct assay /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0031252 // cell leading edge // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008013 // beta-catenin binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0017166 // vinculin binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051435 // BH4 domain binding // inferred from electronic annotation","chr12:120649842-120703495 (-) // 99.87 // q24.23"]
["11729730_at",0.10130167,0.0332489,-0.0332489,-0.050795555,0.12653399,-0.04601574,0.91366744,0.7506334,1.0166758,0.023859745,1.0166758,"up","TPD52L3",89882.0,"","","","chr9:6328343-6330670 (+) // 99.4 // p24.1"]
["11721710_a_at",-0.1334238,0.014729023,-0.30390596,-0.014728546,0.080631256,0.022359848,0.5329784,0.15125136,-1.1252829,-0.17028773,1.1252829,"down","SHROOM3",57619.0,"0000902 // cell morphogenesis // inferred from sequence or structural similarity /// 0000902 // cell morphogenesis // inferred from electronic annotation /// 0001843 // neural tube closure // inferred from electronic annotation /// 0002066 // columnar/cuboidal epithelial cell development // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007389 // pattern specification process // inferred from sequence or structural similarity /// 0007389 // pattern specification process // inferred from electronic annotation /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0043482 // cellular pigment accumulation // inferred from sequence or structural similarity /// 0045176 // apical protein localization // inferred from sequence or structural similarity","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from sequence or structural similarity /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005912 // adherens junction // inferred from sequence or structural similarity /// 0005912 // adherens junction // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from sequence or structural similarity /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0043296 // apical junction complex // inferred from sequence or structural similarity /// 0043296 // apical junction complex // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation","chr4:77356194-77704402 (+) // 94.99 // q21.1"]
["11718946_at",-0.0028877258,0.0028877258,0.20881367,-0.20626831,0.048964024,-0.22044802,0.53833723,0.1553628,1.1451384,0.19552195,1.1451384,"up","PGPEP1",54858.0,"0006508 // proteolysis // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation","0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr19:18451396-18480759 (+) // 72.11 // p13.11"]
["11733603_a_at",-0.13399601,-0.010217667,0.010379314,0.013685942,-0.012820959,0.010217428,0.70793897,0.35149014,-1.0340497,-0.048305597,1.0340497,"down","SLC52A1",55065.0,"0006810 // transport // inferred from electronic annotation /// 0032218 // riboflavin transport // inferred from direct assay","0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0032217 // riboflavin transporter activity // inferred from direct assay","chr17:4935897-4938721 (-) // 85.69 // p13.2"]
["11757219_at",-0.0016670227,-0.08530903,0.0016670227,0.007498741,-0.033418655,0.00726223,0.80854493,0.5199743,-1.0155189,-0.022217095,1.0155189,"down","LINC00473",90632.0,"0006351 // transcription, DNA-dependent // inferred from mutant phenotype","","","chr6:166337535-166401527 (-) // 97.06 // q27"]
["11737539_a_at",0.020895958,-0.011750221,0.011750221,-0.16347456,-0.19648409,0.014775753,0.5182294,0.13965172,1.0882623,0.122026354,1.0882623,"up","PVR",5817.0,"0002860 // positive regulation of natural killer cell mediated cytotoxicity directed against tumor cell target // inferred from mutant phenotype /// 0007155 // cell adhesion // inferred from electronic annotation /// 0034329 // cell junction assembly // traceable author statement /// 0034332 // adherens junction organization // traceable author statement /// 0042271 // susceptibility to natural killer cell mediated cytotoxicity // inferred from mutant phenotype /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045216 // cell-cell junction organization // traceable author statement /// 0045954 // positive regulation of natural killer cell mediated cytotoxicity // inferred from mutant phenotype /// 0050776 // regulation of immune response // traceable author statement /// 0060370 // susceptibility to T cell mediated cytotoxicity // inferred from direct assay","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0030054 // cell junction // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0004872 // receptor activity // inferred from electronic annotation /// 0004872 // receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0050839 // cell adhesion molecule binding // inferred from physical interaction","chr19:45147097-45162362 (+) // 91.85 // q13.31"]
["11737550_at",-0.14228964,-0.027441025,0.027441025,0.029482126,0.11769128,-0.03918028,0.6585134,0.28434965,-1.0595323,-0.08342755,1.0595323,"down","LHFPL5",222662.0,"0007605 // sensory perception of sound // inferred from electronic annotation /// 0060088 // auditory receptor cell stereocilium organization // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation","","chr6:35773069-35791852 (+) // 81.93 // p21.31"]
["11734764_at",-0.08905959,-0.107437134,0.24082327,6.108284E-4,0.013484716,-6.108284E-4,0.9790735,0.932026,1.0071515,0.010280694,1.0071515,"up","FGFR1",2260.0,"0000165 // MAPK cascade // traceable author statement /// 0001501 // skeletal system development // traceable author statement /// 0001764 // neuron migration // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006468 // protein phosphorylation // non-traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from genetic interaction /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from direct assay /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from genetic interaction /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from physical interaction /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from electronic annotation /// 0010518 // positive regulation of phospholipase activity // traceable author statement /// 0010863 // positive regulation of phospholipase C activity // inferred from direct assay /// 0014068 // positive regulation of phosphatidylinositol 3-kinase cascade // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016477 // cell migration // traceable author statement /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0043009 // chordate embryonic development // traceable author statement /// 0043406 // positive regulation of MAP kinase activity // inferred from direct assay /// 0043410 // positive regulation of MAPK cascade // inferred from mutant phenotype /// 0045595 // regulation of cell differentiation // traceable author statement /// 0045666 // positive regulation of neuron differentiation // inferred from mutant phenotype /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0048705 // skeletal system morphogenesis // traceable author statement","0005576 // extracellular region // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005007 // fibroblast growth factor-activated receptor activity // inferred from direct assay /// 0005007 // fibroblast growth factor-activated receptor activity // traceable author statement /// 0005007 // fibroblast growth factor-activated receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008201 // heparin binding // inferred from direct assay /// 0008201 // heparin binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0017134 // fibroblast growth factor binding // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from physical interaction","chr8:38280853-38326352 (-) // 86.53 // p11.23"]
["11726050_a_at",-0.049333572,-0.07923412,0.0078058243,0.011161804,0.10695553,-0.0078058243,0.53522825,0.15306279,-1.0548402,-0.07702447,1.0548402,"down","FAM108C1",58489.0,"","","0016787 // hydrolase activity // inferred from electronic annotation","chr15:80987451-81047962 (+) // 86.16 // q25.1"]
["11747112_x_at",0.02259922,-0.02259922,0.053804874,0.078397274,-0.04952097,-0.028420448,0.89879674,0.71515274,1.0124025,0.017783023,1.0124025,"up","ZNF766",90321.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:52785363-52795492 (+) // 53.27 // q13.41"]
["11737193_at",0.16170907,0.012666941,-0.012666941,-0.09501767,0.15920377,-0.09820175,0.8262467,0.5540536,1.0462601,0.065241575,1.0462601,"up","UTS2D",257313.0,"","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation","0005179 // hormone activity // inferred from electronic annotation","chr3:190984944-191048325 (-) // 43.87 // q28"]
["11718615_a_at",0.056848526,-0.03531456,0.17390585,0.03531456,-0.049840927,-0.10624504,0.6091898,0.22328943,1.0757954,0.10540374,1.0757954,"up","RABEP1",9135.0,"0006810 // transport // inferred from electronic annotation /// 0006897 // endocytosis // inferred from electronic annotation /// 0006897 // endocytosis // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006944 // cellular membrane fusion // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0005769 // early endosome // traceable author statement /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0030139 // endocytic vesicle // inferred from direct assay /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0055037 // recycling endosome // inferred from electronic annotation","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from physical interaction","chr17:5185557-5289130 (+) // 98.3 // p13.2"]
["11719599_a_at",0.1820538,0.0010261536,-0.06547022,-0.0010261536,0.08437252,-0.08226752,0.884607,0.68249893,1.0272901,0.038843654,1.0272901,"up","HOMER2",9455.0,"0007216 // G-protein coupled glutamate receptor signaling pathway // traceable author statement","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0030160 // GKAP/Homer scaffold activity // inferred from electronic annotation /// 0035256 // G-protein coupled glutamate receptor binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr15:83517734-83621476 (-) // 93.02 // q25.2"]
["11736069_at",0.3170719,-0.07519865,-0.050954103,0.022782803,0.07608199,-0.022782803,0.92727697,0.78319657,1.0268881,0.038279023,1.0268881,"up","JMJD6",23210.0,"0001568 // blood vessel development // inferred from electronic annotation /// 0001822 // kidney development // inferred from electronic annotation /// 0002040 // sprouting angiogenesis // inferred from sequence or structural similarity /// 0002040 // sprouting angiogenesis // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0018395 // peptidyl-lysine hydroxylation to 5-hydroxy-L-lysine // inferred from direct assay /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0033077 // T cell differentiation in thymus // inferred from electronic annotation /// 0042116 // macrophage activation // inferred from electronic annotation /// 0043277 // apoptotic cell clearance // inferred from electronic annotation /// 0043654 // recognition of apoptotic cell // inferred from electronic annotation /// 0048024 // regulation of nuclear mRNA splicing, via spliceosome // inferred from mutant phenotype /// 0048024 // regulation of nuclear mRNA splicing, via spliceosome // inferred from electronic annotation /// 0048821 // erythrocyte development // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0060041 // retina development in camera-type eye // inferred from electronic annotation /// 0070078 // histone H3-R2 demethylation // inferred from direct assay /// 0070079 // histone H4-R3 demethylation // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation","0003723 // RNA binding // traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0003727 // single-stranded RNA binding // inferred from direct assay /// 0004872 // receptor activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016702 // oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen // inferred from electronic annotation /// 0033746 // histone demethylase activity (H3-R2 specific) // inferred from direct assay /// 0033749 // histone demethylase activity (H4-R3 specific) // inferred from direct assay /// 0042802 // identical protein binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070815 // peptidyl-lysine 5-dioxygenase activity // inferred from direct assay","chr17:74708913-74722881 (-) // 91.59 // q25.1"]
["11741701_x_at",-0.099430084,-0.015299797,0.014251232,-0.014251232,0.022175789,0.08584118,0.6089115,0.2226684,-1.0459024,-0.06474819,1.0459024,"down","HIST1H2BJ",8970.0,"0006334 // nucleosome assembly // non-traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0042742 // defense response to bacterium // inferred from electronic annotation","0000786 // nucleosome // non-traceable author statement /// 0000786 // nucleosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation","chr6:27099769-27100575 (-) // 99.5 // p22.1"]
["11742054_a_at",-0.06503463,0.22082806,-0.090480804,0.06503463,-0.17127037,0.09697127,0.9534361,0.85855305,1.0173802,0.024858976,1.0173802,"up","ANO6",196527.0,"0002543 // activation of blood coagulation via clotting cascade // inferred from mutant phenotype /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006821 // chloride transport // inferred from electronic annotation /// 0097045 // phosphatidylserine exposure on blood platelet // inferred from mutant phenotype","0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0034707 // chloride channel complex // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005254 // chloride channel activity // inferred from electronic annotation","chr12:45609875-45834187 (+) // 83.5 // q12"]
["11756336_s_at",-0.008641243,-0.13985348,-0.011980534,0.0896678,0.2342267,0.008641243,0.46798724,0.10554465,-1.120651,-0.16433707,1.120651,"down","ZNF23",7571.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:71481521-71490733 (-) // 85.7 // q22.2"]
["11750315_x_at",-0.0641098,-0.006729126,0.006729603,-0.017261982,0.043349743,0.016890526,0.64706653,0.27022386,-1.0250511,-0.035695855,1.0250511,"down","ZNF429",353088.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:21688462-21720725 (+) // 97.58 // p12"]
["11718910_s_at",-0.13749695,-0.009604454,0.009604454,0.048282623,-0.14508009,0.044100285,0.90836596,0.7377083,-1.0197861,-0.028266607,1.0197861,"down","OTUD5",55593.0,"0006508 // proteolysis // inferred from electronic annotation /// 0032480 // negative regulation of type I interferon production // traceable author statement /// 0032496 // response to lipopolysaccharide // inferred from direct assay /// 0045087 // innate immune response // traceable author statement /// 0070536 // protein K63-linked deubiquitination // inferred from direct assay /// 0071108 // protein K48-linked deubiquitination // inferred from direct assay","0005829 // cytosol // traceable author statement","0004843 // ubiquitin-specific protease activity // inferred from direct assay /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chrX:48779304-48815138 (-) // 90.93 // p11.23"]
["11723004_x_at",0.035420895,-0.05451584,-0.04404354,0.21539354,0.1370244,-0.035420895,0.5716299,0.18547638,-1.0918025,-0.12671188,1.0918025,"down","F2",2147.0,"0001934 // positive regulation of protein phosphorylation // inferred from direct assay /// 0006508 // proteolysis // traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0006953 // acute-phase response // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from direct assay /// 0007275 // multicellular organismal development // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0007596 // blood coagulation // inferred from electronic annotation /// 0007597 // blood coagulation, intrinsic pathway // traceable author statement /// 0007599 // hemostasis // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0009611 // response to wounding // inferred from direct assay /// 0010544 // negative regulation of platelet activation // traceable author statement /// 0017187 // peptidyl-glutamic acid carboxylation // traceable author statement /// 0030168 // platelet activation // inferred from direct assay /// 0030168 // platelet activation // traceable author statement /// 0030168 // platelet activation // inferred from electronic annotation /// 0030193 // regulation of blood coagulation // traceable author statement /// 0030194 // positive regulation of blood coagulation // inferred from direct assay /// 0030307 // positive regulation of cell growth // inferred from electronic annotation /// 0032967 // positive regulation of collagen biosynthetic process // inferred from direct assay /// 0042730 // fibrinolysis // inferred from direct assay /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045861 // negative regulation of proteolysis // inferred from direct assay /// 0048712 // negative regulation of astrocyte differentiation // inferred from direct assay /// 0050900 // leukocyte migration // traceable author statement /// 0051281 // positive regulation of release of sequestered calcium ion into cytosol // inferred from direct assay /// 0051480 // cytosolic calcium ion homeostasis // inferred from direct assay /// 0051918 // negative regulation of fibrinolysis // traceable author statement /// 1900738 // positive regulation of phospholipase C-activating G-protein coupled receptor signaling pathway // inferred from direct assay /// 2000379 // positive regulation of reactive oxygen species metabolic process // inferred from direct assay","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005625 // soluble fraction // traceable author statement /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0005796 // Golgi lumen // traceable author statement /// 0005886 // plasma membrane // traceable author statement","0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from direct assay /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from physical interaction /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // traceable author statement /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0070053 // thrombospondin receptor activity // inferred from direct assay","chr11:46740715-46761056 (+) // 96.95 // p11.2"]
["11740268_at",-0.12959957,-0.111154556,0.21018171,0.021408081,0.08347559,-0.021408081,0.9160225,0.7564217,-1.026701,-0.03801606,1.026701,"down","CCDC18",343099.0,"","","","chr1:93645919-93744266 (+) // 97.13 // p22.1"]
["11760809_at",-0.01588893,0.12638903,-0.12191248,0.19618106,0.015889168,-0.046467543,0.84505785,0.595022,-1.0417471,-0.059005074,1.0417471,"down","CACYBP",27101.0,"0007507 // heart development // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0045740 // positive regulation of DNA replication // inferred from electronic annotation /// 0055007 // cardiac muscle cell differentiation // inferred from electronic annotation /// 0060416 // response to growth hormone stimulus // inferred from electronic annotation /// 0060548 // negative regulation of cell death // inferred from electronic annotation /// 0071277 // cellular response to calcium ion // inferred from electronic annotation","0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005641 // nuclear envelope lumen // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0030877 // beta-catenin destruction complex // inferred from direct assay /// 0043005 // neuron projection // inferred from electronic annotation /// 0044297 // cell body // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction","chr1:174968570-174974541 (+) // 83.81 // q25.1"]
["11735211_at",-0.047630787,0.053775072,-0.10371947,0.047630787,-0.10734868,0.12556362,0.82194567,0.54525137,-1.0384802,-0.054473657,1.0384802,"down","STYK1",55359.0,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation","0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004715 // non-membrane spanning protein tyrosine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr12:10771537-10826914 (-) // 90.93 // p13.2"]
["11761613_at",0.29479313,-0.005395174,-0.104539394,0.005395174,0.27009797,-0.05709219,0.9843036,0.946449,-1.0077801,-0.011180838,1.0077801,"down","SHANK2-AS3",220070.0,"","","","chr11:70708897-70711184 (+) // 45.36 // q13.4"]
["11715909_s_at",-0.051800728,-0.10175657,-0.0348835,0.0348835,0.09976292,0.11494303,0.1973713,0.010000121,-1.106505,-0.14601001,1.106505,"down","MYO6",4646.0,"0006605 // protein targeting // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from sequence or structural similarity /// 0006897 // endocytosis // inferred from mutant phenotype /// 0006897 // endocytosis // inferred from sequence or structural similarity /// 0006897 // endocytosis // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007268 // synaptic transmission // inferred from electronic annotation /// 0007416 // synapse assembly // inferred from electronic annotation /// 0007605 // sensory perception of sound // inferred from electronic annotation /// 0007605 // sensory perception of sound // inferred from direct assay /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0014047 // glutamate secretion // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016358 // dendrite development // inferred from electronic annotation /// 0030048 // actin filament-based movement // inferred from sequence or structural similarity /// 0030048 // actin filament-based movement // non-traceable author statement /// 0030330 // DNA damage response, signal transduction by p53 class mediator // inferred from direct assay /// 0042472 // inner ear morphogenesis // inferred from electronic annotation /// 0042491 // auditory receptor cell differentiation // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0048167 // regulation of synaptic plasticity // inferred from electronic annotation /// 0048839 // inner ear development // inferred from electronic annotation /// 0051046 // regulation of secretion // inferred from mutant phenotype /// 0071257 // cellular response to electrical stimulus // inferred from electronic annotation","0001726 // ruffle // inferred from direct assay /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005902 // microvillus // inferred from electronic annotation /// 0005905 // coated pit // inferred from electronic annotation /// 0005938 // cell cortex // inferred from sequence or structural similarity /// 0012506 // vesicle membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from direct assay /// 0016459 // myosin complex // inferred from electronic annotation /// 0016461 // unconventional myosin complex // traceable author statement /// 0016461 // unconventional myosin complex // non-traceable author statement /// 0016591 // DNA-directed RNA polymerase II, holoenzyme // inferred from direct assay /// 0030139 // endocytic vesicle // inferred from sequence or structural similarity /// 0030139 // endocytic vesicle // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030665 // clathrin coated vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031941 // filamentous actin // inferred from direct assay /// 0031941 // filamentous actin // inferred from sequence or structural similarity /// 0031965 // nuclear membrane // inferred from direct assay /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from electronic annotation /// 0045334 // clathrin-coated endocytic vesicle // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003774 // motor activity // inferred from sequence or structural similarity /// 0003774 // motor activity // inferred from electronic annotation /// 0003779 // actin binding // traceable author statement /// 0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from sequence or structural similarity /// 0005516 // calmodulin binding // traceable author statement /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0043531 // ADP binding // inferred from sequence or structural similarity /// 0051015 // actin filament binding // inferred from direct assay /// 0051015 // actin filament binding // inferred from sequence or structural similarity /// 0060001 // minus-end directed microfilament motor activity // non-traceable author statement","chr6:76458892-76629254 (+) // 91.39 // q14.1"]
["11747056_a_at",-0.029518127,0.049950123,0.1484394,0.029518604,-0.21942425,-0.06865215,0.569753,0.18398817,1.1037982,0.14247636,1.1037982,"up","ASXL1",171023.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0032526 // response to retinoic acid // inferred from sequence or structural similarity /// 0035359 // negative regulation of peroxisome proliferator activated receptor signaling pathway // inferred from sequence or structural similarity /// 0035522 // monoubiquitinated histone H2A deubiquitination // inferred from direct assay /// 0045599 // negative regulation of fat cell differentiation // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0048386 // positive regulation of retinoic acid receptor signaling pathway // inferred from sequence or structural similarity /// 0048387 // negative regulation of retinoic acid receptor signaling pathway // inferred from sequence or structural similarity","0000790 // nuclear chromatin // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0035517 // PR-DUB complex // inferred from direct assay","0003713 // transcription coactivator activity // inferred from sequence or structural similarity /// 0003714 // transcription corepressor activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0042974 // retinoic acid receptor binding // inferred from sequence or structural similarity /// 0042975 // peroxisome proliferator activated receptor binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation","chr20:30946161-31019395 (+) // 77.06 // q11.21"]
["11742407_at",0.03255844,-0.052405834,0.0018339157,0.0,-0.04398918,0.0,0.9256855,0.77898514,1.0060197,0.008658573,1.0060197,"up","NKX6-3",157848.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0000976 // transcription regulatory region sequence-specific DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr8:41503828-41504878 (-) // 93.83 // p11.21"]
["11723619_x_at",-0.07516384,0.07516384,-0.16554666,0.15178919,-0.09238553,0.24496508,0.64755243,0.2706886,-1.1146868,-0.15663846,1.1146868,"down","SNAP91",9892.0,"0007163 // establishment or maintenance of cell polarity // inferred from electronic annotation /// 0007409 // axonogenesis // inferred from electronic annotation /// 0030100 // regulation of endocytosis // inferred from electronic annotation /// 0048268 // clathrin coat assembly // inferred from electronic annotation /// 0051223 // regulation of protein transport // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0005905 // coated pit // inferred from electronic annotation /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030118 // clathrin coat // inferred from electronic annotation /// 0042734 // presynaptic membrane // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0005543 // phospholipid binding // inferred from electronic annotation /// 0005545 // 1-phosphatidylinositol binding // inferred from electronic annotation /// 0030276 // clathrin binding // inferred from electronic annotation","chr6:84262606-84419127 (-) // 95.19 // q14.2"]
["11729586_a_at",-0.0029306412,0.074903965,-0.08999109,-0.20103025,0.0029306412,0.018564701,0.8301015,0.5620894,1.0380235,0.053839065,1.0380235,"up","KLK2",3817.0,"0006508 // proteolysis // inferred from electronic annotation /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement","0005576 // extracellular region // traceable author statement","0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from direct assay /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // traceable author statement /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr19:51376504-51383822 (+) // 57.31 // q13.33"]
["11734838_a_at",0.030115128,-0.06684542,0.11780834,-0.105835915,0.022688389,-0.022688866,0.7350698,0.39384043,1.0441325,0.06230476,1.0441325,"up","ACSF3",197322.0,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from direct assay /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006633 // fatty acid biosynthetic process // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation /// 0090410 // malonate catabolic process // inferred from direct assay","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016878 // acid-thiol ligase activity // inferred from direct assay /// 0090409 // malonyl-CoA synthetase activity // inferred from direct assay","chr16:89160216-89222169 (+) // 97.54 // q24.3"]
["11717370_at",0.15345001,-0.15152168,0.089654446,0.0018892288,-0.060233593,-0.0018892288,0.857607,0.6225399,1.0356995,0.050605457,1.0356995,"up","ARSD",414.0,"0008152 // metabolic process // inferred from electronic annotation","0005764 // lysosome // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004065 // arylsulfatase activity // traceable author statement /// 0008484 // sulfuric ester hydrolase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chrX:2822020-2843810 (-) // 76.52 // p22.33"]
["11740427_at",-0.12716246,0.038001537,0.26945543,0.08611202,-0.038001537,-0.1919322,0.7908418,0.4843676,1.0777621,0.1080388,1.0777621,"up","PSAPL1",768239.0,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0006665 // sphingolipid metabolic process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation","","chr4:7432021-7436700 (-) // 89.78 // p16.1"]
["11715455_x_at",-0.045280457,-0.102385044,0.045280457,0.06440163,0.14714336,-0.10145998,0.7700114,0.4505782,-1.050316,-0.07082341,1.050316,"down","KISS1",3814.0,"0007010 // cytoskeleton organization // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr1:204159468-204165619 (-) // 84.2 // q32.1"]
["11742891_a_at",-0.13055706,-0.04520607,0.054572105,-0.01010704,0.01010704,0.073749065,0.6959952,0.33373198,-1.0460705,-0.06498002,1.0460705,"down","C17orf53",78995.0,"","","","chr17:42219273-42239844 (+) // 97.18 // q21.31"]
["11719446_a_at",0.013773441,0.075847626,-0.013773441,-0.12616396,-0.027191639,0.079464436,0.7912301,0.48550242,1.0352025,0.04991301,1.0352025,"up","CPA1",1357.0,"0006508 // proteolysis // inferred from electronic annotation /// 0006508 // proteolysis // traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005625 // soluble fraction // inferred from electronic annotation","0004180 // carboxypeptidase activity // inferred from electronic annotation /// 0004181 // metallocarboxypeptidase activity // inferred from electronic annotation /// 0004181 // metallocarboxypeptidase activity // traceable author statement /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008238 // exopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:130020211-130027949 (+) // 91.3 // q32.2"]
["11722749_at",0.05542326,-0.033376217,0.065944195,-0.13626337,0.011052132,-0.0110526085,0.63121325,0.25028363,1.0531797,0.074751675,1.0531797,"up","HOOK3",84376.0,"0000226 // microtubule cytoskeleton organization // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0007032 // endosome organization // inferred from mutant phenotype /// 0007040 // lysosome organization // inferred from mutant phenotype /// 0008333 // endosome to lysosome transport // inferred from mutant phenotype /// 0015031 // protein transport // inferred from electronic annotation /// 0022027 // interkinetic nuclear migration // inferred from sequence or structural similarity /// 0022027 // interkinetic nuclear migration // inferred from electronic annotation /// 0031122 // cytoplasmic microtubule organization // inferred from mutant phenotype /// 0034454 // microtubule anchoring at centrosome // inferred from sequence or structural similarity /// 0034454 // microtubule anchoring at centrosome // inferred from electronic annotation /// 0045022 // early endosome to late endosome transport // inferred from mutant phenotype /// 0050768 // negative regulation of neurogenesis // inferred from sequence or structural similarity /// 0050768 // negative regulation of neurogenesis // inferred from electronic annotation /// 0051645 // Golgi localization // inferred from mutant phenotype /// 0071539 // protein localization to centrosome // inferred from sequence or structural similarity /// 0071539 // protein localization to centrosome // inferred from electronic annotation /// 0097150 // neuronal stem cell maintenance // inferred from electronic annotation","0000242 // pericentriolar material // inferred from sequence or structural similarity /// 0000242 // pericentriolar material // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005801 // cis-Golgi network // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0005813 // centrosome // inferred from sequence or structural similarity /// 0005813 // centrosome // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0030897 // HOPS complex // inferred from direct assay /// 0034451 // centriolar satellite // inferred from electronic annotation /// 0070695 // FHF complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // inferred from direct assay /// 0008017 // microtubule binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction","chr8:42751951-42885682 (+) // 78.79 // p11.21"]
["11727212_a_at",0.028172493,0.010353565,0.18398285,-0.07091093,-0.010353565,-0.07793522,0.45475698,0.09795386,1.0921993,0.12723617,1.0921993,"up","DTWD1",56986.0,"","","","chr15:49913225-49937338 (+) // 62.29 // q21.2"]
["11722240_a_at",-0.015788078,-0.007920265,0.007919788,0.044462204,0.08307171,-0.0325222,0.7055254,0.34695652,-1.0259308,-0.03693337,1.0259308,"down","SAV1",60485.0,"0001942 // hair follicle development // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0030216 // keratinocyte differentiation // inferred from electronic annotation /// 0035329 // hippo signaling cascade // inferred from sequence or structural similarity /// 0035329 // hippo signaling cascade // traceable author statement /// 0035329 // hippo signaling cascade // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0046620 // regulation of organ growth // inferred from electronic annotation /// 0050680 // negative regulation of epithelial cell proliferation // inferred from electronic annotation /// 0060044 // negative regulation of cardiac muscle cell proliferation // inferred from electronic annotation /// 0060412 // ventricular septum morphogenesis // inferred from electronic annotation /// 0060487 // lung epithelial cell differentiation // inferred from electronic annotation /// 0060575 // intestinal epithelial cell differentiation // inferred from electronic annotation /// 2000036 // regulation of stem cell maintenance // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0005515 // protein binding // inferred from physical interaction","chr14:51098916-51135548 (-) // 91.97 // q22.1"]
["11761315_at",-0.15427303,0.12596846,-0.06516075,0.017187119,-0.017187119,0.29555893,0.72116274,0.3716262,-1.0940471,-0.1296748,1.0940471,"down","ORC3",23595.0,"0000075 // cell cycle checkpoint // traceable author statement /// 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000084 // S phase of mitotic cell cycle // traceable author statement /// 0000216 // M/G1 transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006260 // DNA replication // traceable author statement /// 0006260 // DNA replication // inferred from electronic annotation","0000808 // origin recognition complex // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005664 // nuclear origin of replication recognition complex // inferred from direct assay /// 0005664 // nuclear origin of replication recognition complex // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003688 // DNA replication origin binding // traceable author statement","chr6:88299853-88373410 (+) // 99.97 // q15"]
["11722507_a_at",-0.10861206,0.020465374,-0.13748074,-0.020465136,0.17017221,0.101513624,0.45475698,0.097975984,-1.1164738,-0.15894939,1.1164738,"down","CLIC5",53405.0,"0006810 // transport // non-traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006821 // chloride transport // inferred from direct assay /// 0006821 // chloride transport // inferred from electronic annotation /// 0007565 // female pregnancy // traceable author statement /// 0007605 // sensory perception of sound // inferred from electronic annotation /// 0008104 // protein localization // inferred from electronic annotation /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0050885 // neuromuscular process controlling balance // inferred from electronic annotation /// 0060088 // auditory receptor cell stereocilium organization // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005938 // cell cortex // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0032420 // stereocilium // inferred from electronic annotation /// 0032421 // stereocilium bundle // inferred from electronic annotation /// 0034707 // chloride channel complex // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005247 // voltage-gated chloride channel activity // inferred from electronic annotation /// 0005254 // chloride channel activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr6:45866187-46048085 (-) // 98.84 // p21.1"]
["11741342_a_at",0.06227064,0.024190426,-0.024190426,0.08489752,-0.03576374,-0.029269695,0.9246941,0.77624136,1.0098462,0.014135601,1.0098462,"up","COL9A1",1297.0,"0001894 // tissue homeostasis // inferred from electronic annotation /// 0002062 // chondrocyte differentiation // inferred from electronic annotation /// 0003417 // growth plate cartilage development // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0009887 // organ morphogenesis // traceable author statement /// 0051216 // cartilage development // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005581 // collagen // inferred from electronic annotation /// 0005594 // collagen type IX // inferred from direct assay /// 0005594 // collagen type IX // traceable author statement","0030020 // extracellular matrix structural constituent conferring tensile strength // inferred by curator /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:70925743-70992912 (-) // 98.51 // q13"]
["11725807_a_at",0.090536594,0.05185342,-0.10979438,0.060666084,-0.05185342,-0.05365491,0.90862435,0.7383228,1.0180529,0.02581258,1.0180529,"up","SNCAIP",9627.0,"0008219 // cell death // inferred from electronic annotation /// 0042417 // dopamine metabolic process // inferred from direct assay /// 0046928 // regulation of neurotransmitter secretion // inferred from direct assay /// 0090083 // regulation of inclusion body assembly // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0042734 // presynaptic membrane // non-traceable author statement /// 0043025 // neuronal cell body // non-traceable author statement","0005515 // protein binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction","chr5:121647792-121799914 (+) // 97.31 // q23.2"]
["11763049_x_at",0.16529179,0.058371305,-0.1051867,-0.058371305,0.07638717,-0.21720624,0.74723893,0.4118399,1.0761572,0.10588885,1.0761572,"up","LOC646813",646813.0,"0034605 // cellular response to heat // inferred from electronic annotation","0005730 // nucleolus // inferred from electronic annotation","","chr11:50368317-50379802 (+) // 94.24 // p11.12"]
["11760440_at",-0.24175858,0.13210201,-0.1613574,0.042850256,0.032629967,-0.032630205,0.75142676,0.41828588,-1.0752121,-0.104621306,1.0752121,"down","TESK2",10420.0,"0006468 // protein phosphorylation // inferred from sequence or structural similarity /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from sequence or structural similarity /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0007283 // spermatogenesis // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from sequence or structural similarity /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0048041 // focal adhesion assembly // inferred from sequence or structural similarity /// 0048041 // focal adhesion assembly // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from sequence or structural similarity /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004712 // protein serine/threonine/tyrosine kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:45864143-45956841 (-) // 67.54 // p34.1"]
["11734598_x_at",0.01120615,-0.01423645,-0.01120615,0.13434315,0.06120634,-0.021762371,0.6261508,0.24301445,-1.0444001,-0.06267449,1.0444001,"down","SLC25A52",147407.0,"0006810 // transport // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr18:29339524-29340843 (-) // 98.94 // q12.1"]
["11738154_at",0.0038223267,-0.022145271,-0.0038223267,0.09460497,0.115848064,-0.28519297,0.9670778,0.89963,1.0122261,0.017531587,1.0122261,"up","ZNF843",283933.0,"","0005622 // intracellular // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:31446758-31454348 (-) // 88.5 // p11.2"]
["11731198_at",-0.020917892,0.101913214,0.020917892,-0.19340634,0.10451627,-0.057659626,0.7561766,0.42512956,1.0590869,0.082821,1.0590869,"up","LHFPL3",375612.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr7:103969103-104549005 (+) // 95.8 // q22.2"]
["11754808_s_at",-0.12213898,-0.056941032,-0.18263865,0.05694151,0.15717793,0.0837965,0.19260049,0.009502326,-1.1646353,-0.21987826,1.1646353,"down","CPAMD8",27151.0,"0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0004866 // endopeptidase inhibitor activity // inferred from electronic annotation /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation","chr19:17003768-17007752 (-) // 92.49 // p13.11"]
["11728873_s_at",0.25415468,-0.028800488,0.028800488,-0.07768917,-0.038578987,0.03714466,0.66850483,0.29681966,1.0800459,0.11109268,1.0800459,"up","RBM24",221662.0,"0010830 // regulation of myotube differentiation // inferred from sequence or structural similarity /// 0010830 // regulation of myotube differentiation // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0043488 // regulation of mRNA stability // inferred from sequence or structural similarity /// 0043488 // regulation of mRNA stability // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003730 // mRNA 3'-UTR binding // inferred from sequence or structural similarity /// 0003730 // mRNA 3'-UTR binding // inferred from electronic annotation","chr6:17281268-17294165 (+) // 92.0 // p22.3"]
["11716961_x_at",0.020576954,0.043697834,-0.020576954,-0.0454278,0.052311897,-0.037732124,0.8162779,0.53417724,1.017373,0.024848664,1.017373,"up","FAM3A",60343.0,"","0005576 // extracellular region // inferred from electronic annotation","","chrX:153734506-153744561 (-) // 96.5 // q28"]
["11761197_x_at",0.007825136,0.0051157475,-0.014404774,-0.056818485,-0.005115509,0.08906078,0.94594383,0.8364713,-1.0066277,-0.009530173,1.0066277,"down","SLC43A2",124935.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006865 // amino acid transport // traceable author statement /// 0006865 // amino acid transport // inferred from electronic annotation /// 0015807 // L-amino acid transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0015179 // L-amino acid transmembrane transporter activity // inferred from electronic annotation","chr17:1488554-1532175 (-) // 77.32 // p13.3"]
["11754910_x_at",-0.10945749,0.08196545,-0.04921055,0.06515169,-0.011746883,0.01174736,0.7888259,0.4809636,-1.0333184,-0.047284864,1.0333184,"down","MICALL2",79778.0,"0006897 // endocytosis // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005923 // tight junction // inferred from electronic annotation /// 0032432 // actin filament bundle // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:1473994-1481160 (-) // 92.5 // p22.3"]
["11720682_at",-0.03341961,-0.026975632,0.02532196,-0.009930611,0.061367035,0.009930611,0.6850734,0.31846654,-1.0225326,-0.032146815,1.0225326,"down","TIFA",92610.0,"0007249 // I-kappaB kinase/NF-kappaB cascade // inferred from electronic annotation","","0005515 // protein binding // inferred from physical interaction","chr4:113196445-113207071 (-) // 83.94 // q25"]
["11741949_a_at",0.09562111,0.019726753,0.015879154,-0.015879154,-0.13383198,-0.021723747,0.44958478,0.09503819,1.0724329,0.10088735,1.0724329,"up","NF1",4763.0,"0000165 // MAPK cascade // inferred from sequence or structural similarity /// 0000165 // MAPK cascade // inferred from electronic annotation /// 0001649 // osteoblast differentiation // inferred from sequence or structural similarity /// 0001649 // osteoblast differentiation // inferred from electronic annotation /// 0001656 // metanephros development // inferred from sequence or structural similarity /// 0001656 // metanephros development // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from sequence or structural similarity /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001889 // liver development // inferred from sequence or structural similarity /// 0001889 // liver development // inferred from electronic annotation /// 0001937 // negative regulation of endothelial cell proliferation // inferred from mutant phenotype /// 0001937 // negative regulation of endothelial cell proliferation // inferred from electronic annotation /// 0001938 // positive regulation of endothelial cell proliferation // inferred from electronic annotation /// 0001952 // regulation of cell-matrix adhesion // inferred from sequence or structural similarity /// 0001952 // regulation of cell-matrix adhesion // inferred from electronic annotation /// 0006469 // negative regulation of protein kinase activity // inferred from sequence or structural similarity /// 0006469 // negative regulation of protein kinase activity // inferred from electronic annotation /// 0007154 // cell communication // inferred from sequence or structural similarity /// 0007154 // cell communication // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007265 // Ras protein signal transduction // inferred from sequence or structural similarity /// 0007265 // Ras protein signal transduction // inferred from electronic annotation /// 0007406 // negative regulation of neuroblast proliferation // inferred from sequence or structural similarity /// 0007406 // negative regulation of neuroblast proliferation // inferred from electronic annotation /// 0007420 // brain development // inferred from sequence or structural similarity /// 0007420 // brain development // inferred from electronic annotation /// 0007422 // peripheral nervous system development // inferred from sequence or structural similarity /// 0007422 // peripheral nervous system development // inferred from electronic annotation /// 0007507 // heart development // inferred from sequence or structural similarity /// 0007507 // heart development // inferred from electronic annotation /// 0007519 // skeletal muscle tissue development // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0008542 // visual learning // inferred from sequence or structural similarity /// 0008542 // visual learning // inferred from electronic annotation /// 0014044 // Schwann cell development // inferred from sequence or structural similarity /// 0014044 // Schwann cell development // inferred from electronic annotation /// 0014065 // phosphatidylinositol 3-kinase cascade // inferred from sequence or structural similarity /// 0014065 // phosphatidylinositol 3-kinase cascade // inferred from electronic annotation /// 0016525 // negative regulation of angiogenesis // inferred from electronic annotation /// 0021510 // spinal cord development // inferred from sequence or structural similarity /// 0021510 // spinal cord development // inferred from electronic annotation /// 0021897 // forebrain astrocyte development // inferred from sequence or structural similarity /// 0021897 // forebrain astrocyte development // inferred from electronic annotation /// 0021915 // neural tube development // inferred from electronic annotation /// 0021987 // cerebral cortex development // inferred from sequence or structural similarity /// 0021987 // cerebral cortex development // inferred from electronic annotation /// 0022011 // myelination in peripheral nervous system // inferred from sequence or structural similarity /// 0022011 // myelination in peripheral nervous system // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from sequence or structural similarity /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030198 // extracellular matrix organization // inferred from sequence or structural similarity /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0030199 // collagen fibril organization // inferred from sequence or structural similarity /// 0030199 // collagen fibril organization // inferred from electronic annotation /// 0030325 // adrenal gland development // inferred from sequence or structural similarity /// 0030325 // adrenal gland development // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // inferred from mutant phenotype /// 0030336 // negative regulation of cell migration // inferred from electronic annotation /// 0032228 // regulation of synaptic transmission, GABAergic // inferred from electronic annotation /// 0032318 // regulation of Ras GTPase activity // inferred from mutant phenotype /// 0032320 // positive regulation of Ras GTPase activity // inferred from direct assay /// 0032320 // positive regulation of Ras GTPase activity // inferred from mutant phenotype /// 0032320 // positive regulation of Ras GTPase activity // inferred from sequence or structural similarity /// 0032320 // positive regulation of Ras GTPase activity // inferred from electronic annotation /// 0035021 // negative regulation of Rac protein signal transduction // inferred from electronic annotation /// 0042060 // wound healing // inferred from sequence or structural similarity /// 0042060 // wound healing // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042992 // negative regulation of transcription factor import into nucleus // inferred from sequence or structural similarity /// 0042992 // negative regulation of transcription factor import into nucleus // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from sequence or structural similarity /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043407 // negative regulation of MAP kinase activity // inferred from sequence or structural similarity /// 0043407 // negative regulation of MAP kinase activity // inferred from electronic annotation /// 0043409 // negative regulation of MAPK cascade // inferred from mutant phenotype /// 0043409 // negative regulation of MAPK cascade // inferred from sequence or structural similarity /// 0043409 // negative regulation of MAPK cascade // inferred from electronic annotation /// 0043473 // pigmentation // inferred from sequence or structural similarity /// 0043473 // pigmentation // inferred from electronic annotation /// 0043525 // positive regulation of neuron apoptotic process // inferred from sequence or structural similarity /// 0043525 // positive regulation of neuron apoptotic process // inferred from electronic annotation /// 0043535 // regulation of blood vessel endothelial cell migration // inferred from mutant phenotype /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0045124 // regulation of bone resorption // inferred from sequence or structural similarity /// 0045124 // regulation of bone resorption // inferred from electronic annotation /// 0045685 // regulation of glial cell differentiation // inferred from sequence or structural similarity /// 0045685 // regulation of glial cell differentiation // inferred from electronic annotation /// 0045762 // positive regulation of adenylate cyclase activity // inferred from sequence or structural similarity /// 0045762 // positive regulation of adenylate cyclase activity // inferred from electronic annotation /// 0045765 // regulation of angiogenesis // inferred from mutant phenotype /// 0045765 // regulation of angiogenesis // inferred from electronic annotation /// 0046580 // negative regulation of Ras protein signal transduction // not recorded /// 0046580 // negative regulation of Ras protein signal transduction // inferred from electronic annotation /// 0046929 // negative regulation of neurotransmitter secretion // inferred from electronic annotation /// 0048147 // negative regulation of fibroblast proliferation // inferred from electronic annotation /// 0048169 // regulation of long-term neuronal synaptic plasticity // inferred from electronic annotation /// 0048485 // sympathetic nervous system development // inferred from sequence or structural similarity /// 0048485 // sympathetic nervous system development // inferred from electronic annotation /// 0048593 // camera-type eye morphogenesis // inferred from sequence or structural similarity /// 0048593 // camera-type eye morphogenesis // inferred from electronic annotation /// 0048712 // negative regulation of astrocyte differentiation // inferred from electronic annotation /// 0048715 // negative regulation of oligodendrocyte differentiation // inferred from sequence or structural similarity /// 0048715 // negative regulation of oligodendrocyte differentiation // inferred from electronic annotation /// 0048745 // smooth muscle tissue development // inferred from sequence or structural similarity /// 0048745 // smooth muscle tissue development // inferred from electronic annotation /// 0048844 // artery morphogenesis // inferred from sequence or structural similarity /// 0048844 // artery morphogenesis // inferred from electronic annotation /// 0048853 // forebrain morphogenesis // inferred from sequence or structural similarity /// 0048853 // forebrain morphogenesis // inferred from electronic annotation /// 0050890 // cognition // inferred from mutant phenotype /// 0051056 // regulation of small GTPase mediated signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005737 // cytoplasm // not recorded /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0030424 // axon // inferred from direct assay /// 0030425 // dendrite // inferred from direct assay /// 0031235 // intrinsic to internal side of plasma membrane // not recorded","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005099 // Ras GTPase activator activity // inferred from direct assay /// 0005099 // Ras GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr17:29421994-29704691 (+) // 97.91 // q11.2"]
["11716297_a_at",-0.0812211,0.061959267,0.009416103,-0.009416103,-0.13459158,0.091411114,0.9552243,0.8632291,1.0099264,0.014250212,1.0099264,"up","CLPTM1",1209.0,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0007275 // multicellular organismal development // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0033081 // regulation of T cell differentiation in thymus // inferred from sequence or structural similarity /// 0033081 // regulation of T cell differentiation in thymus // inferred from electronic annotation","0005887 // integral to plasma membrane // traceable author statement /// 0009897 // external side of plasma membrane // inferred from sequence or structural similarity /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr19:45465216-45496599 (+) // 93.78 // q13.32"]
["11733021_x_at",-0.0015068054,0.014705658,-0.03839779,0.0015058517,-0.0023069382,0.017825127,0.7705799,0.4513418,-1.0098033,-0.01407429,1.0098033,"down","LDHA",3939.0,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006090 // pyruvate metabolic process // traceable author statement /// 0006096 // glycolysis // non-traceable author statement /// 0006096 // glycolysis // inferred from electronic annotation /// 0006144 // purine base metabolic process // traceable author statement /// 0006188 // IMP biosynthetic process // inferred from electronic annotation /// 0006196 // AMP catabolic process // traceable author statement /// 0009117 // nucleotide metabolic process // inferred from electronic annotation /// 0009168 // purine ribonucleoside monophosphate biosynthetic process // inferred from electronic annotation /// 0031668 // cellular response to extracellular stimulus // inferred from electronic annotation /// 0032264 // IMP salvage // inferred from electronic annotation /// 0043101 // purine-containing compound salvage // traceable author statement /// 0044262 // cellular carbohydrate metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0019861 // flagellum // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0003876 // AMP deaminase activity // inferred from electronic annotation /// 0003876 // AMP deaminase activity // traceable author statement /// 0004459 // L-lactate dehydrogenase activity // non-traceable author statement /// 0004459 // L-lactate dehydrogenase activity // inferred from electronic annotation /// 0004459 // L-lactate dehydrogenase activity // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016616 // oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0019239 // deaminase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:18415934-18429765 (+) // 97.05 // p15.1"]
["11747327_s_at",-0.02859974,-0.020571709,0.01813221,0.04403591,-0.01813221,0.038223267,0.6432113,0.26538655,-1.0222316,-0.031722065,1.0222316,"down","TIMM23 /// TIMM23B","100287932 /// 653252","0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006626 // protein targeting to mitochondrion // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005744 // mitochondrial inner membrane presequence translocase complex // inferred from electronic annotation /// 0005744 // mitochondrial inner membrane presequence translocase complex // inferred from direct assay /// 0005758 // mitochondrial intermembrane space // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031305 // integral to mitochondrial inner membrane // inferred from direct assay","0004649 // poly(ADP-ribose) glycohydrolase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0015450 // P-P-bond-hydrolysis-driven protein transmembrane transporter activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr10:51371376-51733237 (+) // 91.79 // q11.23"]
["11755675_a_at",0.069440365,-0.12456131,-0.025501728,0.025621891,0.025501728,-0.04203415,0.8686345,0.6463342,-1.0209442,-0.029904071,1.0209442,"down","SYT2",127833.0,"0006810 // transport // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007269 // neurotransmitter secretion // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030666 // endocytic vesicle membrane // traceable author statement /// 0030672 // synaptic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0042584 // chromaffin granule membrane // inferred from electronic annotation /// 0042598 // vesicular fraction // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0045202 // synapse // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005544 // calcium-dependent phospholipid binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:202565205-202612581 (-) // 88.49 // q32.1"]
["11727197_a_at",-0.051659346,-0.06504178,-0.06648803,0.36430264,0.051659107,0.11080289,0.40507963,0.06931983,-1.1782546,-0.23665132,1.1782546,"down","PCDHA1 /// PCDHA10 /// PCDHA11 /// PCDHA12 /// PCDHA13 /// PCDHA2 /// PCDHA3 /// PCDHA4 /// PCDHA5 /// PCDHA6 /// PCDHA7 /// PCDHA8 /// PCDHA9 /// PCDHAC1 /// PCDHAC2","56134 /// 56135 /// 56136 /// 56137 /// 56138 /// 56139 /// 56140 /// 56141 /// 56142 /// 56143 /// 56144 /// 56145 /// 56146 /// 56147 /// 9752","0007155 // cell adhesion // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr5:140247649-140391929 (+) // 93.16 // q31.3"]
["11750569_a_at",-0.0034236908,-0.01900673,0.02563095,0.0034236908,0.11191177,-0.041540146,0.86830664,0.64553005,-1.0164446,-0.023531534,1.0164446,"down","IARS",3376.0,"0006412 // translation // inferred from electronic annotation /// 0006418 // tRNA aminoacylation for protein translation // inferred from electronic annotation /// 0006418 // tRNA aminoacylation for protein translation // traceable author statement /// 0006428 // isoleucyl-tRNA aminoacylation // inferred from electronic annotation /// 0006450 // regulation of translational fidelity // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement","0005625 // soluble fraction // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0002161 // aminoacyl-tRNA editing activity // inferred from electronic annotation /// 0004812 // aminoacyl-tRNA ligase activity // inferred from electronic annotation /// 0004822 // isoleucine-tRNA ligase activity // inferred from electronic annotation /// 0004822 // isoleucine-tRNA ligase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation","chr9:94972625-95055977 (-) // 95.74 // q22.31"]
["11745822_x_at",0.033347607,0.028723717,0.03960514,-0.091266155,-0.02872324,-0.03569746,0.21840213,0.012833944,1.0612671,0.08578785,1.0612671,"up","SRSF6",6431.0,"0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006376 // mRNA splice site selection // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0031124 // mRNA 3'-end processing // traceable author statement /// 0048025 // negative regulation of nuclear mRNA splicing, via spliceosome // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation","chr20:42086504-42090199 (+) // 98.28 // q13.11"]
["11719303_a_at",0.10943985,0.024320602,0.082491875,-0.024320602,-0.049973488,-0.05654049,0.2178713,0.012751319,1.0834974,0.1156957,1.0834974,"up","EMC8",10328.0,"","0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005739 // mitochondrion // traceable author statement /// 0072546 // ER membrane protein complex // inferred from direct assay","","chr16:85812229-85833269 (-) // 96.89 // q24.1"]
["11756808_a_at",-0.020076752,-0.0755291,-0.13678646,0.020076752,0.039868355,0.057153225,0.29866153,0.030101594,-1.0840993,-0.1164969,1.0840993,"down","ZNF225",7768.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:44617569-44637027 (+) // 93.58 // q13.31"]
["11748598_a_at",-0.16908884,0.16937685,0.099639654,-0.27196908,0.0167315,-0.0167315,0.751726,0.41885096,1.0897261,0.12396555,1.0897261,"up","LMOD1",25802.0,"0006936 // muscle contraction // traceable author statement","0005624 // membrane fraction // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0005523 // tropomyosin binding // inferred from electronic annotation","chr1:201867410-201915676 (-) // 90.45 // q32.1"]
["11741757_a_at",-0.17889881,0.039769173,0.089598656,-0.14343596,-0.012034416,0.012034416,0.9173815,0.75969577,1.0219338,0.031301733,1.0219338,"up","SCARF1",8578.0,"0006707 // cholesterol catabolic process // inferred by curator /// 0006898 // receptor-mediated endocytosis // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0010976 // positive regulation of neuron projection development // inferred from sequence or structural similarity /// 0010976 // positive regulation of neuron projection development // inferred from electronic annotation /// 0016322 // neuron remodeling // inferred from sequence or structural similarity /// 0016322 // neuron remodeling // inferred from electronic annotation /// 0016358 // dendrite development // inferred from electronic annotation /// 0048680 // positive regulation of axon regeneration // inferred from sequence or structural similarity /// 0048680 // positive regulation of axon regeneration // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // traceable author statement /// 0005044 // scavenger receptor activity // inferred from direct assay /// 0030169 // low-density lipoprotein particle binding // inferred from direct assay","chr17:1537151-1549041 (-) // 85.69 // p13.3"]
["11732473_x_at",0.06729698,0.08190298,-0.06729698,0.27850342,-0.20021677,-0.09215927,0.948988,0.8444477,1.0223755,0.03192512,1.0223755,"up","CIDEC",63924.0,"0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005925 // focal adhesion // inferred from direct assay","","chr3:9908393-9920740 (-) // 95.73 // p25.3"]
["11763234_at",-0.060388803,-0.0031869411,0.11697388,0.0124976635,0.0031869411,-0.08118057,0.82236147,0.54604334,1.0278511,0.03963129,1.0278511,"up","CCDC91",55297.0,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","","chr12:28410134-28726561 (+) // 88.01 // p11.22"]
["11732945_x_at",-0.008395195,0.029868603,-0.03344679,-0.02857256,0.10062599,0.008395195,0.80292815,0.5095985,-1.0215837,-0.030807378,1.0215837,"down","CCDC48",79825.0,"","","","chr3:128720149-128759583 (+) // 89.27 // q21.3"]
["11729732_x_at",-0.013822079,0.028349638,-0.0520401,0.15171623,0.0074174404,-0.0074174404,0.6871248,0.32157856,-1.044691,-0.063076235,1.044691,"down","FXYD2 /// FXYD6-FXYD2","100533181 /// 486","0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // non-traceable author statement /// 0006811 // ion transport // inferred from electronic annotation /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0034220 // ion transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005890 // sodium:potassium-exchanging ATPase complex // non-traceable author statement /// 0005890 // sodium:potassium-exchanging ATPase complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005215 // transporter activity // traceable author statement /// 0005216 // ion channel activity // non-traceable author statement /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005391 // sodium:potassium-exchanging ATPase activity // traceable author statement","chr11:117690789-117693433 (-) // 76.01 // q23.3"]
["11742216_a_at",-0.11401296,-0.11979103,0.07327032,0.011996508,0.036821365,-0.011996508,0.7192512,0.3684824,-1.0466543,-0.06578507,1.0466543,"down","KLRD1",3824.0,"0007166 // cell surface receptor signaling pathway // traceable author statement /// 0050776 // regulation of immune response // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // traceable author statement /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr12:10460416-10469850 (+) // 48.31 // p13.2"]
["11751606_x_at",0.008346081,0.05381465,-0.14721203,-0.13100123,-0.008346081,0.009359598,0.95102596,0.85179347,1.0104367,0.014978879,1.0104367,"up","SP140",11262.0,"0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006952 // defense response // traceable author statement","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:231090443-231176192 (+) // 99.81 // q37.1"]
["11728569_at",-0.007930756,-0.04642296,0.009768963,0.057286263,-0.080289364,0.007930756,0.94476515,0.83226275,-1.0068421,-0.0098375,1.0068421,"down","GSTCD",79807.0,"","","","chr4:106629940-106768882 (+) // 78.93 // q24"]
["11716564_a_at",0.04138851,0.029730797,0.2038641,-0.029730797,-0.1090889,-0.07876873,0.36993417,0.053996623,1.1205373,0.16419065,1.1205373,"up","SDCCAG3",10807.0,"","0005737 // cytoplasm // inferred from electronic annotation","","chr9:139296380-139305054 (-) // 89.59 // q34.3"]
["11749651_a_at",-0.012295246,-0.037303925,-0.06755829,0.021576881,0.012295246,0.018465996,0.2806192,0.025218517,-1.0399387,-0.05649847,1.0399387,"down","RECQL5",9400.0,"0006259 // DNA metabolic process // non-traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006310 // DNA recombination // inferred from electronic annotation /// 0032508 // DNA duplex unwinding // non-traceable author statement /// 0032508 // DNA duplex unwinding // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // non-traceable author statement /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016591 // DNA-directed RNA polymerase II, holoenzyme // inferred from direct assay /// 0031965 // nuclear membrane // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003678 // DNA helicase activity // non-traceable author statement /// 0003678 // DNA helicase activity // traceable author statement /// 0004386 // helicase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr17:73622932-73663261 (-) // 99.71 // q25.1"]
["11746568_x_at",0.019960403,-0.005423069,0.108525276,0.005423069,-0.031300545,-0.053099155,0.53833723,0.15539086,1.0477877,0.06734639,1.0477877,"up","HIF3A",64344.0,"0001666 // response to hypoxia // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from electronic annotation","chr19:46807143-46841795 (+) // 85.8 // q13.32"]
["11723844_s_at",-0.017191887,-0.051657677,0.026550293,0.0061855316,-0.0061855316,0.026254654,0.7420664,0.40419573,-1.0159655,-0.022851357,1.0159655,"down","TMEM183A /// TMEM183B","653659 /// 92703","","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr1:202976523-202992667 (+) // 97.75 // q32.1 /// chr3:149699465-149701165 (-) // 97.41 // q25.1"]
["11734112_at",0.0073781013,-0.00737834,-0.10599971,-0.10599971,0.09577799,0.04738307,0.8165735,0.53542227,-1.0336304,-0.047720365,1.0336304,"down","TIGIT",201633.0,"0032695 // negative regulation of interleukin-12 production // inferred from mutant phenotype /// 0032733 // positive regulation of interleukin-10 production // inferred from mutant phenotype /// 0050868 // negative regulation of T cell activation // inferred from mutant phenotype","0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr3:114009905-114029135 (+) // 88.89 // q13.31"]
["11730587_at",0.057250977,0.06784773,-0.057250977,0.061470985,-0.25528765,-0.12594461,0.64475185,0.26713333,1.0936893,0.12920298,1.0936893,"up","GATA5",140628.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0060575 // intestinal epithelial cell differentiation // inferred from direct assay /// 0071773 // cellular response to BMP stimulus // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0001158 // enhancer sequence-specific DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr20:61038552-61051026 (-) // 92.92 // q13.33"]
["11745540_x_at",0.16403627,0.09280825,-0.06880903,0.02705431,-0.115062475,-0.027054548,0.6521167,0.27713805,1.072541,0.10103279,1.072541,"up","ANK2",287.0,"0002027 // regulation of heart rate // inferred from mutant phenotype /// 0003283 // atrial septum development // inferred from mutant phenotype /// 0006874 // cellular calcium ion homeostasis // inferred from sequence or structural similarity /// 0007165 // signal transduction // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0008104 // protein localization // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from genetic interaction /// 0010881 // regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion // inferred from genetic interaction /// 0010881 // regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion // inferred from sequence or structural similarity /// 0010882 // regulation of cardiac muscle contraction by calcium ion signaling // inferred from mutant phenotype /// 0031647 // regulation of protein stability // inferred by curator /// 0033292 // T-tubule organization // inferred from sequence or structural similarity /// 0033365 // protein localization to organelle // inferred from genetic interaction /// 0034394 // protein localization at cell surface // inferred from sequence or structural similarity /// 0034613 // cellular protein localization // inferred from genetic interaction /// 0043268 // positive regulation of potassium ion transport // inferred from sequence or structural similarity /// 0050821 // protein stabilization // inferred from sequence or structural similarity /// 0051279 // regulation of release of sequestered calcium ion into cytosol // inferred from genetic interaction /// 0051924 // regulation of calcium ion transport // inferred from genetic interaction /// 0051925 // regulation of calcium ion transport via voltage-gated calcium channel activity // inferred from sequence or structural similarity /// 0051928 // positive regulation of calcium ion transport // inferred from sequence or structural similarity /// 0055117 // regulation of cardiac muscle contraction // inferred from mutant phenotype /// 0060048 // cardiac muscle contraction // inferred from electronic annotation /// 0060307 // regulation of ventricular cardiomyocyte membrane repolarization // inferred from mutant phenotype /// 0070296 // sarcoplasmic reticulum calcium ion transport // traceable author statement /// 0070972 // protein localization in endoplasmic reticulum // inferred from genetic interaction /// 0072659 // protein localization in plasma membrane // inferred from genetic interaction /// 0072659 // protein localization in plasma membrane // inferred from sequence or structural similarity /// 0086004 // regulation of cardiac muscle cell contraction // inferred from genetic interaction /// 0086005 // regulation of ventricular cardiac muscle cell action potential // inferred from mutant phenotype /// 0086014 // regulation of atrial cardiac muscle cell action potential // inferred from mutant phenotype /// 0086015 // regulation of SA node cardiac muscle cell action potential // inferred from sequence or structural similarity /// 0086046 // membrane depolarization involved in regulation of SA node cardiac muscle cell action potential // traceable author statement /// 0086066 // atrial cardiomyocyte to AV node cell communication // inferred from sequence or structural similarity /// 0086070 // SA node cardiomyocyte to atrial cardiomyocyte communication // inferred from mutant phenotype /// 0086091 // regulation of heart rate by cardiac conduction // inferred from mutant phenotype /// 0086091 // regulation of heart rate by cardiac conduction // inferred from sequence or structural similarity /// 1901018 // positive regulation of potassium ion transmembrane transporter activity // inferred from sequence or structural similarity /// 1901021 // positive regulation of calcium ion transmembrane transporter activity // inferred from sequence or structural similarity /// 2001259 // positive regulation of cation channel activity // inferred from sequence or structural similarity","0005622 // intracellular // inferred from genetic interaction /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from electronic annotation /// 0014704 // intercalated disc // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from direct assay /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0030018 // Z disc // inferred from sequence or structural similarity /// 0030315 // T-tubule // inferred from sequence or structural similarity /// 0031430 // M band // inferred from sequence or structural similarity /// 0031430 // M band // inferred from electronic annotation /// 0031672 // A band // inferred from sequence or structural similarity /// 0042383 // sarcolemma // inferred from sequence or structural similarity /// 0043034 // costamere // inferred from sequence or structural similarity","0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from physical interaction /// 0030507 // spectrin binding // inferred from physical interaction /// 0030674 // protein binding, bridging // inferred from sequence or structural similarity /// 0044325 // ion channel binding // inferred from physical interaction /// 0044325 // ion channel binding // inferred from sequence or structural similarity /// 0051117 // ATPase binding // inferred from sequence or structural similarity","chr4:114262988-114302846 (+) // 98.49 // q26"]
["11718903_a_at",0.0034646988,-0.047729254,0.09372711,-0.13654423,0.0617795,-0.0034646988,0.8393232,0.5837985,1.0299426,0.04256398,1.0299426,"up","FILIP1L",11259.0,"","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016459 // myosin complex // non-traceable author statement","","chr3:99566204-99833349 (-) // 98.37 // q12.1"]
["11736811_a_at",0.08152413,-0.010939598,-0.06206274,0.14923096,0.00369215,-0.0036919117,0.80376,0.51139385,-1.033045,-0.046903174,1.033045,"down","PDCD1LG2",80380.0,"0006955 // immune response // non-traceable author statement /// 0031295 // T cell costimulation // traceable author statement /// 0042102 // positive regulation of T cell proliferation // inferred from electronic annotation /// 0042130 // negative regulation of T cell proliferation // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation","chr9:5510526-5571282 (+) // 97.42 // p24.1"]
["11749436_a_at",0.06343937,-0.08867073,-0.105793,-0.06343937,0.18597603,0.33083296,0.5860421,0.20009312,-1.1445639,-0.19479802,1.1445639,"down","NFIC",4782.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from genetic interaction /// 0006260 // DNA replication // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement","chr19:3366583-3462905 (+) // 92.69 // p13.3"]
["11720875_at",0.027887344,-0.027887344,-0.16215658,-0.103753805,0.09760523,0.044520378,0.7787317,0.46341962,-1.0474219,-0.06684272,1.0474219,"down","CORO2B",10391.0,"0030036 // actin cytoskeleton organization // not recorded /// 0030036 // actin cytoskeleton organization // non-traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0015629 // actin cytoskeleton // not recorded /// 0015629 // actin cytoskeleton // non-traceable author statement /// 0016020 // membrane // non-traceable author statement","0003779 // actin binding // non-traceable author statement /// 0003779 // actin binding // inferred from electronic annotation /// 0051015 // actin filament binding // not recorded","chr15:68924326-69020142 (+) // 87.03 // q23"]
["11732097_a_at",0.032378197,0.123520374,-0.036695242,-0.17776752,-0.032378197,0.056585073,0.69510293,0.33264184,1.0650501,0.09092133,1.0650501,"up","CDC14A",8556.0,"0006470 // protein dephosphorylation // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation","0004721 // phosphoprotein phosphatase activity // traceable author statement /// 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008138 // protein tyrosine/serine/threonine phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation","chr1:100818022-100965016 (+) // 98.9 // p21.2"]
["11732322_at",0.1935463,0.19118595,0.17550564,-0.17550564,-0.21529675,-0.24654484,0.044616908,4.791841E-5,1.3187718,0.399195,1.3187718,"up","FXN",2395.0,"0006119 // oxidative phosphorylation // inferred from electronic annotation /// 0006783 // heme biosynthetic process // non-traceable author statement /// 0006783 // heme biosynthetic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // inferred from mutant phenotype /// 0006879 // cellular iron ion homeostasis // inferred from electronic annotation /// 0007005 // mitochondrion organization // inferred from electronic annotation /// 0007628 // adult walking behavior // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0009060 // aerobic respiration // inferred from electronic annotation /// 0009792 // embryo development ending in birth or egg hatching // inferred from electronic annotation /// 0010039 // response to iron ion // inferred from mutant phenotype /// 0010722 // regulation of ferrochelatase activity // inferred from direct assay /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0016226 // iron-sulfur cluster assembly // inferred from electronic annotation /// 0016540 // protein autoprocessing // inferred from direct assay /// 0018283 // iron incorporation into metallo-sulfur cluster // inferred from direct assay /// 0019230 // proprioception // inferred from electronic annotation /// 0030307 // positive regulation of cell growth // inferred from mutant phenotype /// 0040015 // negative regulation of multicellular organism growth // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0045773 // positive regulation of axon extension // inferred from electronic annotation /// 0046621 // negative regulation of organ growth // inferred from electronic annotation /// 0048554 // positive regulation of metalloenzyme activity // inferred from mutant phenotype /// 0051347 // positive regulation of transferase activity // inferred from mutant phenotype /// 0051349 // positive regulation of lyase activity // inferred from direct assay /// 0051349 // positive regulation of lyase activity // inferred from mutant phenotype /// 0051353 // positive regulation of oxidoreductase activity // inferred from mutant phenotype /// 0055072 // iron ion homeostasis // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0070301 // cellular response to hydrogen peroxide // inferred from direct assay /// 0090201 // negative regulation of release of cytochrome c from mitochondria // inferred from mutant phenotype","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // inferred from sequence or structural similarity /// 0005759 // mitochondrial matrix // non-traceable author statement /// 0005829 // cytosol // inferred from direct assay","0004322 // ferroxidase activity // inferred from direct assay /// 0004322 // ferroxidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008198 // ferrous iron binding // inferred from direct assay /// 0008199 // ferric iron binding // inferred from direct assay /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from electronic annotation /// 0034986 // iron chaperone activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from direct assay /// 0051537 // 2 iron, 2 sulfur cluster binding // inferred from direct assay","chr9:71650174-71689099 (+) // 73.82 // q21.11"]
["11754262_s_at",-0.0019350052,0.0019350052,-0.046039104,0.073896885,0.219738,-0.0061035156,0.5617761,0.17674993,-1.0801189,-0.111190125,1.0801189,"down","CHD9",80205.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016817 // hydrolase activity, acting on acid anhydrides // inferred from electronic annotation","chr16:53357509-53361408 (+) // 97.33 // q12.2"]
["11717825_a_at",-0.025769949,0.10282564,-0.064026594,-0.08654785,0.14239621,0.025769949,0.93202794,0.7969809,-1.0159737,-0.022863038,1.0159737,"down","STMN2",11075.0,"0007026 // negative regulation of microtubule depolymerization // inferred from direct assay /// 0010976 // positive regulation of neuron projection development // inferred from direct assay /// 0010977 // negative regulation of neuron projection development // inferred from direct assay /// 0030182 // neuron differentiation // non-traceable author statement /// 0031115 // negative regulation of microtubule polymerization // inferred from direct assay /// 0031117 // positive regulation of microtubule depolymerization // inferred from direct assay /// 0035556 // intracellular signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030426 // growth cone // inferred from electronic annotation /// 0031982 // vesicle // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr8:80523048-80578397 (+) // 92.49 // q21.13"]
["11758224_s_at",0.085483074,-0.024023056,0.0130085945,-0.03173113,0.025430202,-0.0130085945,0.76296824,0.43765447,1.0219038,0.031259324,1.0219038,"up","CCDC80",151887.0,"0010811 // positive regulation of cell-substrate adhesion // inferred from electronic annotation /// 0030198 // extracellular matrix organization // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005604 // basement membrane // inferred from electronic annotation /// 0005614 // interstitial matrix // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from electronic annotation","0001968 // fibronectin binding // inferred from electronic annotation /// 0005539 // glycosaminoglycan binding // inferred from electronic annotation /// 0008201 // heparin binding // inferred from electronic annotation","chr3:112324111-112324574 (-) // 67.1 // q13.2"]
["11754165_a_at",0.052490234,-0.12531567,-0.1295569,0.15653181,0.0994606,-0.052490473,0.57913905,0.19301118,-1.0983171,-0.1352947,1.0983171,"down","LRRK1",79705.0,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr15:101514007-101609051 (+) // 93.41 // q26.3"]
["11760182_at",-0.02604723,-0.12875223,0.02604723,-0.03458762,0.103304625,0.061144352,0.6167042,0.23106275,-1.0615737,-0.086204596,1.0615737,"down","ZNF549",256051.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:58038668-58052090 (+) // 89.94 // q13.43"]
["11743349_a_at",-0.03145647,0.047183514,0.007162571,0.002963066,-0.016509533,-0.002963066,0.85018045,0.60492224,1.0091447,0.013133003,1.0091447,"up","TRAF7",84231.0,"0000185 // activation of MAPKKK activity // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from direct assay /// 0006915 // apoptotic process // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from mutant phenotype /// 0043410 // positive regulation of MAPK cascade // inferred from direct assay","0000151 // ubiquitin ligase complex // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:2213542-2228132 (+) // 96.35 // p13.3"]
["11747712_s_at",0.030538559,-0.06662512,-0.010399342,0.022894382,0.010399342,-0.110562325,0.95049894,0.8504555,1.0071377,0.010260886,1.0071377,"up","LOC100288332 /// LOC100506193 /// LOC399491 /// LOC642778 /// LOC642799 /// NPIP /// PKD1 /// PKD1P1","100288332 /// 100506193 /// 339044 /// 399491 /// 5310 /// 642778 /// 642799 /// 9284","0001502 // cartilage condensation // inferred from electronic annotation /// 0001568 // blood vessel development // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from sequence or structural similarity /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001822 // kidney development // inferred from sequence or structural similarity /// 0001822 // kidney development // inferred from electronic annotation /// 0001892 // embryonic placenta development // inferred from sequence or structural similarity /// 0001892 // embryonic placenta development // inferred from electronic annotation /// 0006611 // protein export from nucleus // inferred from sequence or structural similarity /// 0006611 // protein export from nucleus // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from sequence or structural similarity /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // traceable author statement /// 0007160 // cell-matrix adhesion // traceable author statement /// 0007161 // calcium-independent cell-matrix adhesion // traceable author statement /// 0007218 // neuropeptide signaling pathway // inferred from electronic annotation /// 0007259 // JAK-STAT cascade // inferred from sequence or structural similarity /// 0007259 // JAK-STAT cascade // inferred from electronic annotation /// 0007507 // heart development // inferred from expression pattern /// 0007507 // heart development // inferred from electronic annotation /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016337 // cell-cell adhesion // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from sequence or structural similarity /// 0018105 // peptidyl-serine phosphorylation // inferred from electronic annotation /// 0021510 // spinal cord development // inferred from expression pattern /// 0021915 // neural tube development // inferred from expression pattern /// 0031659 // positive regulation of cyclin-dependent protein kinase activity involved in G1/S // inferred from direct assay /// 0032092 // positive regulation of protein binding // inferred from sequence or structural similarity /// 0032092 // positive regulation of protein binding // inferred from electronic annotation /// 0042994 // cytoplasmic sequestering of transcription factor // inferred from sequence or structural similarity /// 0042994 // cytoplasmic sequestering of transcription factor // inferred from electronic annotation /// 0043588 // skin development // inferred from expression pattern /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0048565 // digestive tract development // inferred from expression pattern /// 0048754 // branching morphogenesis of a tube // inferred from direct assay /// 0048806 // genitalia development // inferred from expression pattern /// 0050982 // detection of mechanical stimulus // inferred from sequence or structural similarity /// 0050982 // detection of mechanical stimulus // inferred from electronic annotation /// 0051028 // mRNA transport // inferred from electronic annotation /// 0051216 // cartilage development // inferred from expression pattern /// 0060428 // lung epithelium development // inferred from expression pattern /// 0060674 // placenta blood vessel development // inferred from sequence or structural similarity /// 0060674 // placenta blood vessel development // inferred from electronic annotation /// 0072164 // mesonephric tubule development // inferred from expression pattern /// 0072177 // mesonephric duct development // inferred from expression pattern /// 0072205 // metanephric collecting duct development // inferred from expression pattern /// 0072218 // metanephric ascending thin limb development // inferred from expression pattern /// 0072237 // metanephric proximal tubule development // inferred from expression pattern /// 0072287 // metanephric distal tubule morphogenesis // inferred from expression pattern","0002133 // polycystin complex // inferred from sequence or structural similarity /// 0002133 // polycystin complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005643 // nuclear pore // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0005929 // cilium // inferred from sequence or structural similarity /// 0005929 // cilium // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016323 // basolateral plasma membrane // inferred from direct assay /// 0031512 // motile primary cilium // inferred from sequence or structural similarity /// 0031512 // motile primary cilium // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005261 // cation channel activity // inferred from sequence or structural similarity /// 0005261 // cation channel activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0030246 // carbohydrate binding // inferred from electronic annotation /// 0044325 // ion channel binding // inferred from physical interaction","chr16:15017853-15023613 (+) // 97.16 // p13.11 /// chr16:16416504-16422098 (+) // 96.99 // p13.11 /// chr16:18434219-18439876 (-) // 96.38 // p12.3 /// chr16:2153389-2162944 (-) // 95.32 // p13.3"]
["11720424_a_at",0.099075794,-0.07006168,-0.10607481,-0.072628975,0.07006168,0.2503128,0.7336581,0.3915933,-1.0779339,-0.10826872,1.0779339,"down","MEX3C",51320.0,"","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0003723 // RNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr18:48700919-48723690 (-) // 90.26 // q21.2"]
["11746195_x_at",0.11903,0.06304836,0.014989853,-0.09305191,-0.069291115,-0.014989853,0.29896012,0.030168766,1.0903568,0.12480034,1.0903568,"up","LOC100288142 /// LOC100506032 /// NBPF10 /// NBPF11 /// NBPF12 /// NBPF14 /// NBPF16 /// NBPF24 /// NBPF7 /// NBPF8 /// NBPF9","100132406 /// 100288142 /// 100506032 /// 149013 /// 200030 /// 25832 /// 343505 /// 400818 /// 728841 /// 728912 /// 728936","","0005737 // cytoplasm // inferred from electronic annotation","","chr1:144621436-144830406 (+) // 84.52 // q21.1 /// chr1:145299719-145370303 (+) // 79.84 // q21.1 /// chr1:148739689-148758306 (+) // 79.43 // q21.2 /// chr1:148577604-148596262 (+) // 79.38 // q21.2 /// chr1:146401660-146467743 (+) // 79.52 // q21.1 /// chr1:148002926-148340457 (-) // 80.16 // q21.2 /// chr1:146032542-146251009 (-) // 79.7 // q21.1 /// chr1:147574323-147593003 (-) // 79.54 // q21.2"]
["11759785_s_at",0.022274971,-0.0014295578,0.11801052,0.0014295578,-0.051958084,-0.0040826797,0.57010984,0.18439603,1.0457145,0.064489014,1.0457145,"up","SVIL",6840.0,"0007010 // cytoskeleton organization // inferred from electronic annotation /// 0007519 // skeletal muscle tissue development // inferred from mutant phenotype","0002102 // podosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0015629 // actin cytoskeleton // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043034 // costamere // inferred from direct assay /// 0071437 // invadopodium // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0051015 // actin filament binding // inferred from direct assay","chr10:29769091-29785447 (-) // 99.82 // p11.23"]
["11732802_a_at",-0.08963084,0.22304869,-0.06729245,0.061065435,-0.055419683,0.055419683,0.9962524,0.98824567,1.0011698,0.0016866794,1.0011698,"up","GRIK1",2897.0,"0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0007215 // glutamate receptor signaling pathway // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007399 // nervous system development // traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0007417 // central nervous system development // traceable author statement /// 0014054 // positive regulation of gamma-aminobutyric acid secretion // inferred from electronic annotation /// 0030534 // adult behavior // inferred from electronic annotation /// 0032229 // negative regulation of synaptic transmission, GABAergic // inferred from electronic annotation /// 0032230 // positive regulation of synaptic transmission, GABAergic // inferred from electronic annotation /// 0035235 // ionotropic glutamate receptor signaling pathway // inferred from electronic annotation /// 0035249 // synaptic transmission, glutamatergic // inferred from electronic annotation /// 0042391 // regulation of membrane potential // inferred from electronic annotation /// 0048172 // regulation of short-term neuronal synaptic plasticity // inferred from electronic annotation /// 0048266 // behavioral response to pain // inferred from electronic annotation /// 0051899 // membrane depolarization // inferred from electronic annotation /// 0051966 // regulation of synaptic transmission, glutamatergic // traceable author statement /// 0051967 // negative regulation of synaptic transmission, glutamatergic // inferred from electronic annotation /// 0060079 // regulation of excitatory postsynaptic membrane potential // inferred from electronic annotation /// 0060080 // regulation of inhibitory postsynaptic membrane potential // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0008328 // ionotropic glutamate receptor complex // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030288 // outer membrane-bounded periplasmic space // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0032983 // kainate selective glutamate receptor complex // inferred from electronic annotation /// 0042734 // presynaptic membrane // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043195 // terminal button // inferred from electronic annotation /// 0043235 // receptor complex // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004970 // ionotropic glutamate receptor activity // inferred from electronic annotation /// 0005215 // transporter activity // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005234 // extracellular-glutamate-gated ion channel activity // inferred from electronic annotation /// 0008144 // drug binding // inferred from electronic annotation /// 0015277 // kainate selective glutamate receptor activity // inferred from direct assay /// 0015277 // kainate selective glutamate receptor activity // inferred from electronic annotation /// 0015277 // kainate selective glutamate receptor activity // traceable author statement /// 0016595 // glutamate binding // inferred from electronic annotation /// 0022843 // voltage-gated cation channel activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation","chr21:30909082-31312282 (-) // 99.78 // q21.3"]
["11746152_a_at",-0.08748412,0.07896376,0.088186026,-0.13845325,0.0112810135,-0.0112810135,0.7255764,0.37968847,1.0516877,0.07270638,1.0516877,"up","VWA3B",200403.0,"","","","chr2:98703629-98929410 (+) // 93.31 // q11.2"]
["11763323_x_at",0.0085988045,0.045986176,-0.27351713,-0.15027428,-0.008599281,0.03840494,0.92960817,0.79073435,-1.0230106,-0.03282111,1.0230106,"down","GRAMD1B",57476.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr11:123431036-123498478 (+) // 95.55 // q24.1"]
["11717734_at",-0.08663082,-0.0044989586,-0.118443966,0.072975636,0.23088741,0.0044989586,0.4297204,0.08314336,-1.1271232,-0.17264526,1.1271232,"down","ZCCHC24",219654.0,"","","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr10:81142080-81205380 (-) // 89.93 // q22.3"]
["11737914_at",-0.11318636,0.091831684,-0.05281639,0.05281639,0.14301252,-0.11797428,0.86182505,0.6315514,-1.0357496,-0.0506752,1.0357496,"down","GPR15",2838.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0035589 // G-protein coupled purinergic nucleotide receptor signaling pathway // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0045028 // G-protein coupled purinergic nucleotide receptor activity // inferred from electronic annotation","chr3:98250742-98251994 (+) // 100.0 // q11.2"]
["11718736_a_at",-0.0012965202,0.026551247,-0.0060629845,0.087314606,0.0012965202,-0.04451275,0.9492569,0.8455515,-1.0057713,-0.008302262,1.0057713,"down","PCMTD1",115294.0,"0006464 // cellular protein modification process // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0004719 // protein-L-isoaspartate (D-aspartate) O-methyltransferase activity // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr8:52730139-52811746 (-) // 93.98 // q11.23"]
["11756382_a_at",0.01595211,-0.018621445,-6.5135956E-4,-0.0011882782,6.5135956E-4,0.009297371,0.9006176,0.7206764,-1.0027952,-0.0040270234,1.0027952,"down","SUPT7L",9913.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0043966 // histone H3 acetylation // inferred from direct assay /// 0051457 // maintenance of protein location in nucleus // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0030914 // STAGA complex // inferred from direct assay","0003713 // transcription coactivator activity // inferred from direct assay /// 0004402 // histone acetyltransferase activity // inferred from direct assay","chr2:27875930-27886522 (-) // 94.68 // p23.3"]
["11735773_x_at",-0.018901348,0.018134117,-0.089010715,-0.018134117,0.04270363,0.41757703,0.6492756,0.27351204,-1.1307721,-0.1773082,1.1307721,"down","TRIM48",79097.0,"","0005622 // intracellular // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:55029657-55038594 (+) // 96.74 // q11 /// chr11:89657211-89666233 (+) // 93.82 // q14.3 /// chr11:89575225-89584142 (+) // 91.3 // q14.3 /// chr11:89644572-89653596 (-) // 93.95 // q14.3"]
["11720069_s_at",0.024453163,0.009228706,-0.007329941,-0.01637268,-0.018050194,0.007329941,0.6071175,0.22120647,1.012425,0.01781496,1.012425,"up","COMMD8",54951.0,"","","0005515 // protein binding // inferred from physical interaction","chr4:47452803-47465736 (-) // 95.3 // p12"]
["11744716_a_at",0.010219812,0.07601833,-0.1700015,-0.010219812,-0.056264162,0.018304348,0.96253395,0.88455683,-1.0082555,-0.011861249,1.0082555,"down","PFN2",5217.0,"0007010 // cytoskeleton organization // inferred from electronic annotation /// 0008064 // regulation of actin polymerization or depolymerization // non-traceable author statement /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030837 // negative regulation of actin filament polymerization // inferred from electronic annotation /// 0030838 // positive regulation of actin filament polymerization // inferred from electronic annotation /// 2000300 // regulation of synaptic vesicle exocytosis // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0015629 // actin cytoskeleton // non-traceable author statement /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0043195 // terminal button // inferred from electronic annotation","0003779 // actin binding // non-traceable author statement /// 0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005546 // phosphatidylinositol-4,5-bisphosphate binding // non-traceable author statement","chr3:149682690-149688709 (-) // 95.74 // q25.1"]
["11727515_at",-0.12268782,-0.050947666,-0.2765193,0.050947905,0.058088303,0.07756925,0.31343502,0.033943474,-1.1584963,-0.21225339,1.1584963,"down","TTC9",23508.0,"","","","chr14:71108296-71141812 (+) // 75.88 // q24.2"]
["11755429_a_at",0.034091473,0.027586937,-0.10672188,0.04569912,-0.040042877,-0.027586937,0.9645472,0.89169365,-1.0053545,-0.0077043367,1.0053545,"down","KIAA1549",57670.0,"0000165 // MAPK cascade // inferred from electronic annotation /// 0000186 // activation of MAPKK activity // inferred from electronic annotation /// 0000186 // activation of MAPKK activity // traceable author statement /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0006916 // anti-apoptosis // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0009887 // organ morphogenesis // traceable author statement /// 0010628 // positive regulation of gene expression // inferred from mutant phenotype /// 0016310 // phosphorylation // inferred from electronic annotation /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from direct assay /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043434 // response to peptide hormone stimulus // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0051591 // response to cAMP // inferred from electronic annotation /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from direct assay /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from electronic annotation /// 0070849 // response to epidermal growth factor stimulus // inferred from direct assay /// 0071277 // cellular response to calcium ion // inferred from direct assay","0005624 // membrane fraction // inferred from electronic annotation /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004709 // MAP kinase kinase kinase activity // inferred from electronic annotation /// 0005057 // receptor signaling protein activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0031434 // mitogen-activated protein kinase kinase binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr7:138522269-138583965 (-) // 99.89 // q34"]
["11717171_at",-0.03547573,0.023999214,-0.1492958,-0.023999214,0.05428028,0.034832,0.6312071,0.25010252,-1.0535766,-0.075295195,1.0535766,"down","BCL2L2",599.0,"0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // traceable author statement /// 0007283 // spermatogenesis // traceable author statement /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype","0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr14:23775970-23780968 (+) // 90.49 // q11.2"]
["11725823_a_at",0.0394454,-0.058403254,-0.18187857,0.09462738,0.023724794,-0.023725033,0.6292653,0.24687877,-1.0706507,-0.09848787,1.0706507,"down","JPH1",56704.0,"0007517 // muscle organ development // inferred from electronic annotation /// 0060314 // regulation of ryanodine-sensitive calcium-release channel activity // traceable author statement /// 0060402 // calcium ion transport into cytosol // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0014701 // junctional sarcoplasmic reticulum membrane // traceable author statement /// 0014701 // junctional sarcoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016529 // sarcoplasmic reticulum // inferred from electronic annotation /// 0030018 // Z disc // inferred from electronic annotation /// 0030314 // junctional membrane complex // non-traceable author statement /// 0030314 // junctional membrane complex // inferred from electronic annotation /// 0033017 // sarcoplasmic reticulum membrane // inferred from electronic annotation","0008307 // structural constituent of muscle // inferred from electronic annotation","chr8:75146934-75233678 (-) // 98.24 // q21.11"]
["11716499_x_at",0.020568848,0.013568878,-2.6893616E-4,2.6893616E-4,-0.017353058,-0.0015411377,0.4624645,0.10255218,1.0122025,0.017497944,1.0122025,"up","ADRM1",11047.0,"0006368 // transcription elongation from RNA polymerase II promoter // inferred from mutant phenotype /// 0010950 // positive regulation of endopeptidase activity // inferred from direct assay /// 0043248 // proteasome assembly // inferred from direct assay","0000502 // proteasome complex // inferred from direct assay /// 0000502 // proteasome complex // inferred from electronic annotation /// 0005624 // membrane fraction // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005887 // integral to plasma membrane // traceable author statement","0002020 // protease binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0061133 // endopeptidase activator activity // inferred from direct assay /// 0070628 // proteasome binding // inferred from direct assay","chr20:60877866-60883918 (+) // 95.19 // q13.33"]
["11752681_s_at",-0.0029182434,-0.01786232,-0.0047364235,0.041169643,0.020539284,0.0029182434,0.39960733,0.06669426,-1.0210462,-0.030048091,1.0210462,"down","TMEM135",65084.0,"0007031 // peroxisome organization // inferred from sequence or structural similarity","0005777 // peroxisome // inferred from sequence or structural similarity /// 0005777 // peroxisome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr11:87029176-87033385 (+) // 78.66 // q14.2"]
["11756251_x_at",0.001200676,-0.008424759,0.02617073,0.003042221,-0.0012950897,-0.001200676,0.8412517,0.58733183,1.0042604,0.0061334316,1.0042604,"up","RPS5",6193.0,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // inferred by curator /// 0006412 // translation // inferred from genetic interaction /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred by curator /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006450 // regulation of translational fidelity // inferred from genetic interaction /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral infectious cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0015935 // small ribosomal subunit // inferred from electronic annotation /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0022627 // cytosolic small ribosomal subunit // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003723 // RNA binding // non-traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0003729 // mRNA binding // inferred from direct assay /// 0003735 // structural constituent of ribosome // inferred from direct assay /// 0003735 // structural constituent of ribosome // inferred from electronic annotation","chr19:58904366-58906171 (+) // 100.0 // q13.43"]
["11719626_at",0.06334925,-0.005607128,-0.029706001,0.005607128,-0.07674551,0.2664523,0.8611078,0.6302239,-1.039406,-0.05575921,1.039406,"down","RDH10",157506.0,"0001656 // metanephros development // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0002138 // retinoic acid biosynthetic process // inferred from electronic annotation /// 0007601 // visual perception // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation /// 0008406 // gonad development // inferred from electronic annotation /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0014032 // neural crest cell development // inferred from electronic annotation /// 0031076 // embryonic camera-type eye development // inferred from electronic annotation /// 0035115 // embryonic forelimb morphogenesis // inferred from electronic annotation /// 0042572 // retinol metabolic process // inferred from direct assay /// 0042572 // retinol metabolic process // inferred from electronic annotation /// 0042574 // retinal metabolic process // inferred from direct assay /// 0043583 // ear development // inferred from electronic annotation /// 0043584 // nose development // inferred from electronic annotation /// 0048568 // embryonic organ development // inferred from electronic annotation /// 0048703 // embryonic viscerocranium morphogenesis // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0060431 // primary lung bud formation // inferred from electronic annotation /// 0060449 // bud elongation involved in lung branching // inferred from electronic annotation","0005624 // membrane fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004745 // retinol dehydrogenase activity // inferred from direct assay /// 0004745 // retinol dehydrogenase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0052650 // NADP-retinol dehydrogenase activity // inferred from electronic annotation","chr8:74206809-74237516 (+) // 87.83 // q21.11"]
["11749797_x_at",0.12347031,-0.100631714,-0.06503868,0.086853504,-0.06969643,0.065038204,0.87047976,0.6513406,-1.0291585,-0.04146515,1.0291585,"down","MLH3",27030.0,"0006200 // ATP catabolic process // not recorded /// 0006281 // DNA repair // inferred from electronic annotation /// 0006298 // mismatch repair // not recorded /// 0006298 // mismatch repair // inferred from electronic annotation /// 0006298 // mismatch repair // non-traceable author statement /// 0006298 // mismatch repair // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007130 // synaptonemal complex assembly // inferred from electronic annotation /// 0007131 // reciprocal meiotic recombination // not recorded /// 0007131 // reciprocal meiotic recombination // non-traceable author statement /// 0007140 // male meiosis // inferred from electronic annotation /// 0007144 // female meiosis I // inferred from electronic annotation /// 0008104 // protein localization // inferred from electronic annotation","0000793 // condensed chromosome // inferred from electronic annotation /// 0000795 // synaptonemal complex // not recorded /// 0000795 // synaptonemal complex // inferred from electronic annotation /// 0001673 // male germ cell nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005712 // chiasma // not recorded /// 0005712 // chiasma // inferred from electronic annotation /// 0032300 // mismatch repair complex // not recorded /// 0032390 // MutLbeta complex // not recorded","0003682 // chromatin binding // inferred from electronic annotation /// 0003696 // satellite DNA binding // traceable author statement /// 0003697 // single-stranded DNA binding // not recorded /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016887 // ATPase activity // not recorded /// 0019237 // centromeric DNA binding // inferred from electronic annotation /// 0030983 // mismatched DNA binding // inferred from electronic annotation /// 0032407 // MutSalpha complex binding // not recorded","chr14:75482329-75513343 (-) // 90.97 // q24.3"]
["11738241_s_at",-0.003955364,-0.014872074,0.003955364,-0.1637342,0.08005571,0.09519315,0.9755149,0.9217187,-1.0061152,-0.0087955,1.0061152,"down","SNTG2",54221.0,"0007417 // central nervous system development // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016013 // syntrophin complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0042383 // sarcolemma // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0030165 // PDZ domain binding // inferred from physical interaction","chr2:946555-1371382 (+) // 96.65 // p25.3"]
["11746888_x_at",0.004644394,-0.160007,-0.004644394,-0.023265839,0.0870595,0.19223738,0.5491866,0.16602637,-1.1008968,-0.13867928,1.1008968,"down","BPHL",670.0,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006520 // cellular amino acid metabolic process // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0009636 // response to toxin // traceable author statement /// 0016045 // detection of bacterium // inferred from electronic annotation /// 0045739 // positive regulation of DNA repair // inferred from electronic annotation","0000785 // chromatin // inferred from electronic annotation /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0003682 // chromatin binding // inferred from electronic annotation /// 0004649 // poly(ADP-ribose) glycohydrolase activity // inferred from direct assay /// 0004649 // poly(ADP-ribose) glycohydrolase activity // inferred from electronic annotation /// 0004649 // poly(ADP-ribose) glycohydrolase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation","chr6:3118609-3153428 (+) // 68.01 // p25.2"]
["11725326_a_at",-0.031079292,-0.13528728,0.03107977,0.059289455,-0.05883217,0.23249531,0.65184444,0.2766504,-1.0888057,-0.12274649,1.0888057,"down","CAMK2D",817.0,"0001558 // regulation of cell growth // non-traceable author statement /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // non-traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0008016 // regulation of heart contraction // traceable author statement /// 0010613 // positive regulation of cardiac muscle hypertrophy // inferred from mutant phenotype /// 0010881 // regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0060314 // regulation of ryanodine-sensitive calcium-release channel activity // traceable author statement /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060341 // regulation of cellular localization // inferred from mutant phenotype","0005654 // nucleoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005954 // calcium- and calmodulin-dependent protein kinase complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016529 // sarcoplasmic reticulum // inferred from electronic annotation /// 0030666 // endocytic vesicle membrane // traceable author statement /// 0033017 // sarcoplasmic reticulum membrane // inferred from electronic annotation /// 0042383 // sarcolemma // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004683 // calmodulin-dependent protein kinase activity // inferred from electronic annotation /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005524 // ATP binding // non-traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr4:114372189-114683202 (-) // 84.34 // q26"]
["11754340_a_at",0.063137054,0.016121864,0.18111801,-0.016121864,-0.047133446,-0.076496124,0.3913946,0.06257401,1.0968575,0.13337617,1.0968575,"up","ELAC2",60528.0,"0008033 // tRNA processing // inferred from electronic annotation /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation","0004518 // nuclease activity // inferred from electronic annotation /// 0004519 // endonuclease activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:12895709-12921504 (-) // 97.79 // p12"]
["11762279_at",0.07445288,-0.13559294,-0.06078434,0.05314493,-0.05314493,0.19032001,0.69182724,0.32806295,-1.0748099,-0.10408153,1.0748099,"down","","","0001525 // angiogenesis // inferred from electronic annotation /// 0015012 // heparan sulfate proteoglycan biosynthetic process // inferred from electronic annotation /// 0015015 // heparan sulfate proteoglycan biosynthetic process, enzymatic modification // traceable author statement /// 0048286 // lung alveolus development // inferred from electronic annotation /// 0060716 // labyrinthine layer blood vessel development // inferred from electronic annotation","0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008146 // sulfotransferase activity // inferred from electronic annotation /// 0008146 // sulfotransferase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation","chr2:129046828-129076046 (-) // 87.9 // q14.3"]
["11729348_at",0.07146883,-0.0059275627,0.16592646,0.005927086,-0.04312992,-0.033232212,0.497687,0.12451785,1.0722448,0.10063427,1.0722448,"up","HMGN5",79366.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // non-traceable author statement","0000785 // chromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003682 // chromatin binding // non-traceable author statement /// 0031492 // nucleosomal DNA binding // inferred from electronic annotation","chrX:80369199-80457441 (-) // 61.83 // q21.1"]
["11751017_a_at",-0.031804085,0.031803608,-0.031943798,0.08470678,-0.12224007,0.06063509,0.9342806,0.8026146,-1.0127996,-0.018348768,1.0127996,"down","EARS2",124454.0,"0006412 // translation // inferred from electronic annotation /// 0006418 // tRNA aminoacylation for protein translation // traceable author statement /// 0006418 // tRNA aminoacylation for protein translation // inferred from electronic annotation /// 0006424 // glutamyl-tRNA aminoacylation // inferred from direct assay /// 0006424 // glutamyl-tRNA aminoacylation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0043039 // tRNA aminoacylation // inferred from electronic annotation /// 0070127 // tRNA aminoacylation for mitochondrial protein translation // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0004812 // aminoacyl-tRNA ligase activity // inferred from electronic annotation /// 0004818 // glutamate-tRNA ligase activity // inferred from direct assay /// 0004818 // glutamate-tRNA ligase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016876 // ligase activity, forming aminoacyl-tRNA and related compounds // inferred from electronic annotation /// 0050561 // glutamate-tRNA(Gln) ligase activity // inferred from direct assay","chr16:23536342-23568665 (-) // 87.11 // p12.2"]
["11741699_at",-0.10380983,0.057348967,0.009150028,-0.24203396,-0.009150028,0.07561445,0.8866577,0.68696004,1.0324602,0.046086185,1.0324602,"up","HIST1H2BJ",8970.0,"0006334 // nucleosome assembly // non-traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0042742 // defense response to bacterium // inferred from electronic annotation","0000786 // nucleosome // non-traceable author statement /// 0000786 // nucleosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation","chr6:27099769-27100575 (-) // 99.5 // p22.1"]
["11727136_a_at",-0.047548294,-0.047198772,-0.02272749,0.12074661,0.02272749,0.20591164,0.34347886,0.043869447,-1.1139003,-0.15562011,1.1139003,"down","PUS7L",83448.0,"0001522 // pseudouridine synthesis // inferred from electronic annotation /// 0008033 // tRNA processing // inferred from electronic annotation /// 0009451 // RNA modification // inferred from electronic annotation","","0003723 // RNA binding // inferred from electronic annotation /// 0009982 // pseudouridine synthase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation","chr12:44122413-44152561 (-) // 86.13 // q12"]
["11752887_x_at",0.016514778,0.0055332184,-0.0055327415,0.19467258,-0.025273323,-0.00817728,0.81601804,0.5337695,-1.0339996,-0.048235573,1.0339996,"down","EHD1",10938.0,"0006184 // GTP catabolic process // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from mutant phenotype /// 0006897 // endocytosis // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0010886 // positive regulation of cholesterol storage // inferred from sequence or structural similarity /// 0010886 // positive regulation of cholesterol storage // inferred from electronic annotation /// 0016197 // endosomal transport // inferred from electronic annotation /// 0032456 // endocytic recycling // inferred from genetic interaction /// 0032456 // endocytic recycling // inferred from mutant phenotype /// 0034383 // low-density lipoprotein particle clearance // inferred from sequence or structural similarity /// 0034383 // low-density lipoprotein particle clearance // inferred from electronic annotation /// 0042632 // cholesterol homeostasis // inferred from sequence or structural similarity /// 0042632 // cholesterol homeostasis // inferred from electronic annotation /// 0051260 // protein homooligomerization // inferred from physical interaction","0005622 // intracellular // inferred from mutant phenotype /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0005811 // lipid particle // inferred from sequence or structural similarity /// 0005811 // lipid particle // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0010008 // endosome membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030139 // endocytic vesicle // inferred from electronic annotation /// 0031095 // platelet dense tubular network membrane // inferred from sequence or structural similarity /// 0031095 // platelet dense tubular network membrane // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from direct assay /// 0031901 // early endosome membrane // inferred from electronic annotation /// 0055038 // recycling endosome membrane // inferred from direct assay /// 0055038 // recycling endosome membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation","chr11:64621678-64647137 (-) // 98.9 // q13.1"]
["11738328_at",0.12885618,-0.149827,-0.12740326,-0.0017504692,0.040946007,0.0017504692,0.8106556,0.52372307,-1.044713,-0.06310669,1.044713,"down","HNMT",3176.0,"0002347 // response to tumor cell // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0006972 // hyperosmotic response // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0007585 // respiratory gaseous exchange // traceable author statement /// 0014075 // response to amine stimulus // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation /// 0042220 // response to cocaine // inferred from electronic annotation /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation /// 0070555 // response to interleukin-1 // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation","0008168 // methyltransferase activity // inferred from electronic annotation /// 0008170 // N-methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0046539 // histamine N-methyltransferase activity // inferred from electronic annotation","chr2:138721807-138739248 (+) // 65.27 // q22.1"]
["11716745_s_at",0.04448414,-0.009343147,0.047351837,-0.036017418,0.009343147,-0.019599915,0.50618255,0.13176842,1.0301985,0.04292228,1.0301985,"up","FAM60A",58516.0,"","","","chr12:31433355-31479128 (-) // 88.0 // p11.21"]
["11730312_a_at",-0.0010147095,-0.008406639,0.13869286,-0.061333656,0.010443687,0.0010147095,0.68728006,0.3219466,1.0422603,0.059715614,1.0422603,"up","AHSA2",130872.0,"0006950 // response to stress // inferred from electronic annotation /// 0032781 // positive regulation of ATPase activity // inferred from electronic annotation","","0001671 // ATPase activator activity // inferred from electronic annotation /// 0051087 // chaperone binding // inferred from electronic annotation","chr2:61404663-61414686 (+) // 89.91 // p15"]
["11742430_s_at",0.10602379,0.078798294,-0.011732101,-0.088374615,-0.03243828,0.011732101,0.47484955,0.10973337,1.0673674,0.0940569,1.0673674,"up","N6AMT1",29104.0,"0006479 // protein methylation // inferred from direct assay /// 0030307 // positive regulation of cell growth // inferred from direct assay /// 0032259 // methylation // inferred from electronic annotation","0043234 // protein complex // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008276 // protein methyltransferase activity // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation","chr21:30244512-30257693 (-) // 19.97 // q21.3"]
["11723774_x_at",-0.018257141,8.6021423E-4,0.15996742,-0.0065722466,0.18164825,-8.6069107E-4,0.9699742,0.90583414,-1.0073383,-0.010548252,1.0073383,"down","ABHD12",26090.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0016787 // hydrolase activity // inferred from electronic annotation /// 0047372 // acylglycerol lipase activity // inferred from electronic annotation","chr20:25275378-25371477 (-) // 92.14 // p11.21"]
["11745054_a_at",0.014546394,0.0068950653,0.029702187,-0.026069641,-0.023327827,-0.0068950653,0.239579,0.016331444,1.0251337,0.03581212,1.0251337,"up","MRPL43",84545.0,"0006412 // translation // non-traceable author statement","0005739 // mitochondrion // inferred from electronic annotation /// 0005761 // mitochondrial ribosome // non-traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003735 // structural constituent of ribosome // non-traceable author statement","chr10:102746030-102747222 (-) // 96.68 // q24.31"]
["11740124_at",-0.100833416,-0.031426907,0.031426907,0.13865328,0.22401476,-0.12094164,0.7138296,0.35995883,-1.0823647,-0.11418666,1.0823647,"down","HIST1H2AG /// HIST1H2AH /// HIST1H2AI /// HIST1H2AK /// HIST1H2AL /// HIST1H2AM","8329 /// 8330 /// 8332 /// 8336 /// 85235 /// 8969","0006334 // nucleosome assembly // inferred from electronic annotation /// 0006334 // nucleosome assembly // non-traceable author statement","0000786 // nucleosome // inferred from electronic annotation /// 0000786 // nucleosome // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // non-traceable author statement /// 0019899 // enzyme binding // inferred from physical interaction","chr6:27859864-27860963 (-) // 61.51 // p22.1"]
["11742002_at",-0.015778542,0.12952709,-0.16900492,-0.036685467,0.015778542,0.22312975,0.80033785,0.5043509,-1.0612955,-0.08582642,1.0612955,"down","OR2H2",7932.0,"0006952 // defense response // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0007618 // mating // traceable author statement /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // traceable author statement /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // traceable author statement","chr6:29555682-29556745 (+) // 98.88 // p22.1"]
["11715541_a_at",0.088778734,0.043955326,-0.043955564,-0.21965098,0.047444582,-0.13160944,0.59606683,0.21001522,1.0949498,0.13086478,1.0949498,"up","THY1",7070.0,"0001525 // angiogenesis // inferred from sequence or structural similarity /// 0001525 // angiogenesis // inferred from electronic annotation /// 0006469 // negative regulation of protein kinase activity // inferred from sequence or structural similarity /// 0006469 // negative regulation of protein kinase activity // inferred from electronic annotation /// 0007010 // cytoskeleton organization // inferred from sequence or structural similarity /// 0007010 // cytoskeleton organization // inferred from electronic annotation /// 0016337 // cell-cell adhesion // inferred from sequence or structural similarity /// 0016337 // cell-cell adhesion // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // inferred from sequence or structural similarity /// 0030336 // negative regulation of cell migration // inferred from electronic annotation /// 0032321 // positive regulation of Rho GTPase activity // inferred from sequence or structural similarity /// 0032321 // positive regulation of Rho GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from sequence or structural similarity /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0046549 // retinal cone cell development // inferred from sequence or structural similarity /// 0046549 // retinal cone cell development // inferred from electronic annotation /// 0048041 // focal adhesion assembly // inferred from sequence or structural similarity /// 0048041 // focal adhesion assembly // inferred from electronic annotation /// 0050771 // negative regulation of axonogenesis // inferred from sequence or structural similarity /// 0050771 // negative regulation of axonogenesis // inferred from electronic annotation /// 0050852 // T cell receptor signaling pathway // inferred from sequence or structural similarity /// 0050852 // T cell receptor signaling pathway // inferred from electronic annotation /// 0050860 // negative regulation of T cell receptor signaling pathway // inferred from sequence or structural similarity /// 0050860 // negative regulation of T cell receptor signaling pathway // inferred from electronic annotation /// 0050870 // positive regulation of T cell activation // inferred from sequence or structural similarity /// 0050870 // positive regulation of T cell activation // inferred from electronic annotation /// 0051281 // positive regulation of release of sequestered calcium ion into cytosol // inferred from sequence or structural similarity /// 0051281 // positive regulation of release of sequestered calcium ion into cytosol // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // non-traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0009897 // external side of plasma membrane // inferred from sequence or structural similarity /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from direct assay /// 0030425 // dendrite // inferred from electronic annotation /// 0030426 // growth cone // inferred from sequence or structural similarity /// 0030426 // growth cone // inferred from electronic annotation /// 0031225 // anchored to membrane // inferred from electronic annotation /// 0031362 // anchored to external side of plasma membrane // inferred from electronic annotation /// 0045121 // membrane raft // non-traceable author statement /// 0045121 // membrane raft // inferred from electronic annotation /// 0046658 // anchored to plasma membrane // inferred from electronic annotation","0005100 // Rho GTPase activator activity // inferred from sequence or structural similarity /// 0005100 // Rho GTPase activator activity // inferred from electronic annotation /// 0005178 // integrin binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0034235 // GPI anchor binding // inferred from sequence or structural similarity /// 0034235 // GPI anchor binding // inferred from electronic annotation","chr11:119288035-119294838 (-) // 84.15 // q23.3"]
["11752661_a_at",-0.07808685,0.022632122,-0.081613064,0.038462162,-0.022632122,0.08282709,0.545654,0.1617575,-1.0559745,-0.07857497,1.0559745,"down","MKS1",54903.0,"0030030 // cell projection organization // inferred from electronic annotation /// 0042384 // cilium assembly // inferred from mutant phenotype /// 0042384 // cilium assembly // inferred from electronic annotation /// 0048754 // branching morphogenesis of a tube // inferred from electronic annotation /// 0060271 // cilium morphogenesis // inferred from sequence or structural similarity /// 0060271 // cilium morphogenesis // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0005932 // microtubule basal body // inferred from direct assay /// 0005932 // microtubule basal body // inferred from electronic annotation /// 0035869 // ciliary transition zone // inferred from electronic annotation /// 0036038 // TCTN-B9D complex // inferred from sequence or structural similarity /// 0036038 // TCTN-B9D complex // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr17:56282802-56296601 (-) // 96.88 // q22"]
["11748656_at",-0.02627039,0.02763462,0.013147831,-0.2299056,0.13487673,-0.013147831,0.90124446,0.7220944,1.0287527,0.040896196,1.0287527,"up","FHL1",2273.0,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0007517 // muscle organ development // non-traceable author statement /// 0009887 // organ morphogenesis // non-traceable author statement /// 0010972 // negative regulation of G2/M transition of mitotic cell cycle // inferred from direct assay /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 2000134 // negative regulation of G1/S transition of mitotic cell cycle // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chrX:135252084-135293482 (+) // 98.11 // q26.3"]
["11741815_a_at",-0.005076885,0.03750372,0.0050764084,-0.005076885,0.044352055,-0.08132982,0.8145376,0.53128684,1.0185517,0.02651922,1.0185517,"up","TAB3",257397.0,"0000187 // activation of MAPK activity // traceable author statement /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0007249 // I-kappaB kinase/NF-kappaB cascade // traceable author statement /// 0007254 // JNK cascade // traceable author statement /// 0008063 // Toll signaling pathway // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0051092 // positive regulation of NF-kappaB transcription factor activity // traceable author statement /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0070423 // nucleotide-binding oligomerization domain containing signaling pathway // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0010008 // endosome membrane // traceable author statement","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chrX:30845559-30907511 (-) // 97.98 // p21.2"]
["11717505_a_at",-0.0065722466,-0.041457653,0.15317822,0.0029740334,0.06403923,-0.0029740334,0.9475308,0.8400229,1.0095434,0.01370296,1.0095434,"up","TRAM2",9697.0,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0032964 // collagen biosynthetic process // inferred from mutant phenotype","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr6:52362199-52441834 (-) // 91.56 // p12.2"]
["11744186_at",0.1481843,-0.0879035,-0.020902157,-0.12204504,0.020902157,0.02464056,0.8809399,0.67392564,1.0271358,0.038627006,1.0271358,"up","C16orf70",80262.0,"","","0005515 // protein binding // inferred from physical interaction","chr16:67143914-67182447 (+) // 94.71 // q22.1"]
["11723832_a_at",-0.1389203,0.0054163933,-0.0054163933,0.1435461,0.3458271,-0.008923054,0.5198679,0.14102055,-1.1538509,-0.20645683,1.1538509,"down","TAPT1",202018.0,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0048706 // embryonic skeletal system development // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0016520 // growth hormone-releasing hormone receptor activity // traceable author statement","chr4:16162127-16228164 (-) // 93.88 // p15.32"]
["11716094_a_at",0.157969,0.04234028,-0.005220413,-0.03206253,-8.087158E-4,8.08239E-4,0.58828276,0.20173948,1.0538849,0.07571726,1.0538849,"up","KLF6",1316.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016049 // cell growth // non-traceable author statement /// 0019221 // cytokine-mediated signaling pathway // inferred from electronic annotation /// 0030183 // B cell differentiation // non-traceable author statement /// 0042060 // wound healing // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr10:3818745-3827474 (-) // 93.49 // p15.1"]
["11756082_a_at",0.056444645,0.06916475,0.08009577,-0.18517065,-0.056444645,-0.2672944,0.24890527,0.018175215,1.1795242,0.238205,1.1795242,"up","MID1",4281.0,"0000226 // microtubule cytoskeleton organization // traceable author statement /// 0007026 // negative regulation of microtubule depolymerization // inferred from electronic annotation /// 0007389 // pattern specification process // traceable author statement /// 0032874 // positive regulation of stress-activated MAPK cascade // inferred from mutant phenotype","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005875 // microtubule associated complex // traceable author statement /// 0005881 // cytoplasmic microtubule // inferred from direct assay /// 0015630 // microtubule cytoskeleton // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chrX:10417430-10535202 (-) // 97.06 // p22.2"]
["11734773_x_at",0.019697905,0.0371449,-0.019698143,-0.09021449,0.046346664,-0.29037356,0.6549351,0.28017598,1.0895976,0.123795405,1.0895976,"up","SFTPB",6439.0,"0001666 // response to hypoxia // inferred from electronic annotation /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006665 // sphingolipid metabolic process // inferred from electronic annotation /// 0007585 // respiratory gaseous exchange // inferred from electronic annotation /// 0007585 // respiratory gaseous exchange // traceable author statement /// 0007623 // circadian rhythm // inferred from electronic annotation /// 0009749 // response to glucose stimulus // inferred from electronic annotation /// 0009887 // organ morphogenesis // traceable author statement /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0033189 // response to vitamin A // inferred from electronic annotation /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation /// 0055093 // response to hyperoxia // inferred from electronic annotation /// 0070741 // response to interleukin-6 // inferred from electronic annotation /// 0070848 // response to growth factor stimulus // inferred from electronic annotation /// 0070849 // response to epidermal growth factor stimulus // inferred from electronic annotation /// 0071260 // cellular response to mechanical stimulus // inferred from electronic annotation /// 0071732 // cellular response to nitric oxide // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0005771 // multivesicular body // inferred from electronic annotation /// 0042599 // lamellar body // inferred from electronic annotation","","chr2:85884439-85895864 (-) // 69.16 // p11.2"]
["11762420_at",0.017669678,-0.13182735,0.08333683,-0.017669678,0.11948776,-0.10029507,0.97181576,0.9107578,-1.007501,-0.01078128,1.007501,"down","FBXO11",80204.0,"0006464 // cellular protein modification process // inferred from direct assay /// 0006511 // ubiquitin-dependent protein catabolic process // non-traceable author statement /// 0007605 // sensory perception of sound // inferred from electronic annotation /// 0016567 // protein ubiquitination // non-traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0035246 // peptidyl-arginine N-methylation // inferred from direct assay","0000151 // ubiquitin ligase complex // non-traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","0004842 // ubiquitin-protein ligase activity // non-traceable author statement /// 0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016274 // protein-arginine N-methyltransferase activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:48033908-48038800 (-) // 86.24 // p16.3"]
["11736294_at",0.15538025,8.49247E-4,0.058080196,-0.09208298,-0.12540293,-8.49247E-4,0.4049875,0.069256596,1.1051291,0.14421494,1.1051291,"up","FGFBP3",143282.0,"0043117 // positive regulation of vascular permeability // inferred from direct assay /// 0045743 // positive regulation of fibroblast growth factor receptor signaling pathway // inferred from genetic interaction","0005576 // extracellular region // inferred from direct assay /// 0005576 // extracellular region // inferred from electronic annotation","0008201 // heparin binding // inferred from direct assay /// 0017134 // fibroblast growth factor binding // inferred from physical interaction /// 0019838 // growth factor binding // inferred from electronic annotation","chr10:93666344-93669270 (-) // 83.88 // q23.32"]
["11755551_a_at",0.09208226,0.010461092,-0.050328255,-0.07657719,0.031814575,-0.01046133,0.8130416,0.5283617,1.0251343,0.03581296,1.0251343,"up","MYO18B",84700.0,"0001570 // vasculogenesis // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0048739 // cardiac muscle fiber development // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016459 // myosin complex // inferred from electronic annotation /// 0016461 // unconventional myosin complex // inferred from direct assay /// 0030017 // sarcomere // inferred from electronic annotation /// 0030018 // Z disc // inferred from electronic annotation /// 0031941 // filamentous actin // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003774 // motor activity // inferred from electronic annotation /// 0003779 // actin binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation","chr22:26351280-26426611 (+) // 99.77 // q12.1"]
["11749844_x_at",-0.059886932,0.05142975,-0.1666441,0.19312191,-0.05142975,0.11315775,0.5942729,0.20835344,-1.1044415,-0.14331703,1.1044415,"down","CSF2RA",1438.0,"0019221 // cytokine-mediated signaling pathway // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0004896 // cytokine receptor activity // inferred from electronic annotation","chrX:1393273-1428372 (+) // 83.92 // p22.33 /// chrY:1343273-1378372 (+) // 83.92 // p11.32"]
["11726024_at",-0.0038752556,-0.079678535,0.097548485,-0.008721828,0.0038752556,0.12521935,0.8581279,0.62352806,-1.0248832,-0.035459433,1.0248832,"down","EDN1",1906.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0001501 // skeletal system development // inferred from electronic annotation /// 0001516 // prostaglandin biosynthetic process // inferred from direct assay /// 0001569 // patterning of blood vessels // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001821 // histamine secretion // inferred from electronic annotation /// 0003100 // regulation of systemic arterial blood pressure by endothelin // inferred from direct assay /// 0006885 // regulation of pH // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from direct assay /// 0007186 // G-protein coupled receptor signaling pathway // inferred from direct assay /// 0007204 // elevation of cytosolic calcium ion concentration // inferred from direct assay /// 0007204 // elevation of cytosolic calcium ion concentration // inferred from electronic annotation /// 0007205 // protein kinase C-activating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007243 // intracellular protein kinase cascade // inferred from electronic annotation /// 0007267 // cell-cell signaling // inferred from direct assay /// 0007507 // heart development // inferred from electronic annotation /// 0007585 // respiratory gaseous exchange // inferred from electronic annotation /// 0007589 // body fluid secretion // inferred from electronic annotation /// 0008217 // regulation of blood pressure // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0009953 // dorsal/ventral pattern formation // inferred from electronic annotation /// 0010259 // multicellular organismal aging // inferred from electronic annotation /// 0010460 // positive regulation of heart rate // inferred from direct assay /// 0010595 // positive regulation of endothelial cell migration // traceable author statement /// 0010613 // positive regulation of cardiac muscle hypertrophy // inferred from direct assay /// 0010870 // positive regulation of receptor biosynthetic process // inferred from direct assay /// 0014032 // neural crest cell development // inferred from electronic annotation /// 0014065 // phosphatidylinositol 3-kinase cascade // inferred from direct assay /// 0014824 // artery smooth muscle contraction // inferred from direct assay /// 0014824 // artery smooth muscle contraction // traceable author statement /// 0014826 // vein smooth muscle contraction // inferred from direct assay /// 0015758 // glucose transport // inferred from electronic annotation /// 0016049 // cell growth // inferred from electronic annotation /// 0019229 // regulation of vasoconstriction // inferred from electronic annotation /// 0019233 // sensory perception of pain // inferred from electronic annotation /// 0019722 // calcium-mediated signaling // inferred from direct assay /// 0030072 // peptide hormone secretion // inferred from direct assay /// 0030185 // nitric oxide transport // inferred from direct assay /// 0030195 // negative regulation of blood coagulation // traceable author statement /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0030593 // neutrophil chemotaxis // inferred from direct assay /// 0030818 // negative regulation of cAMP biosynthetic process // inferred from electronic annotation /// 0031583 // phospholipase D-activating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0032269 // negative regulation of cellular protein metabolic process // inferred from direct assay /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0033574 // response to testosterone stimulus // inferred from electronic annotation /// 0034392 // negative regulation of smooth muscle cell apoptotic process // inferred from electronic annotation /// 0035094 // response to nicotine // inferred from electronic annotation /// 0035810 // positive regulation of urine volume // inferred from electronic annotation /// 0035815 // positive regulation of renal sodium excretion // inferred from electronic annotation /// 0042045 // epithelial fluid transport // inferred from electronic annotation /// 0042310 // vasoconstriction // inferred from direct assay /// 0042310 // vasoconstriction // inferred from electronic annotation /// 0042313 // protein kinase C deactivation // inferred from direct assay /// 0042474 // middle ear morphogenesis // inferred from electronic annotation /// 0042482 // positive regulation of odontogenesis // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042554 // superoxide anion generation // inferred from electronic annotation /// 0043179 // rhythmic excitation // inferred from electronic annotation /// 0043200 // response to amino acid stimulus // inferred from electronic annotation /// 0043406 // positive regulation of MAP kinase activity // inferred from direct assay /// 0043507 // positive regulation of JUN kinase activity // inferred from direct assay /// 0045321 // leukocyte activation // traceable author statement /// 0045429 // positive regulation of nitric oxide biosynthetic process // traceable author statement /// 0045793 // positive regulation of cell size // inferred from direct assay /// 0045840 // positive regulation of mitosis // inferred from direct assay /// 0045987 // positive regulation of smooth muscle contraction // inferred from electronic annotation /// 0046887 // positive regulation of hormone secretion // inferred from direct assay /// 0046888 // negative regulation of hormone secretion // inferred from electronic annotation /// 0048016 // inositol phosphate-mediated signaling // inferred from direct assay /// 0048514 // blood vessel morphogenesis // inferred from electronic annotation /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from direct assay /// 0050880 // regulation of blood vessel size // inferred from electronic annotation /// 0051216 // cartilage development // inferred from electronic annotation /// 0051482 // elevation of cytosolic calcium ion concentration involved in phospholipase C-activating G-protein coupled signaling pathway // inferred from electronic annotation /// 0051771 // negative regulation of nitric-oxide synthase biosynthetic process // inferred from direct assay /// 0051899 // membrane depolarization // inferred from electronic annotation /// 0051930 // regulation of sensory perception of pain // inferred from electronic annotation /// 0060137 // maternal process involved in parturition // inferred from electronic annotation /// 0060298 // positive regulation of sarcomere organization // inferred from mutant phenotype /// 0060585 // positive regulation of prostaglandin-endoperoxide synthase activity // inferred from mutant phenotype /// 0070101 // positive regulation of chemokine-mediated signaling pathway // inferred by curator /// 0071347 // cellular response to interleukin-1 // inferred from electronic annotation /// 0071356 // cellular response to tumor necrosis factor // inferred from electronic annotation /// 0090023 // positive regulation of neutrophil chemotaxis // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay","0005102 // receptor binding // inferred from electronic annotation /// 0005125 // cytokine activity // inferred from direct assay /// 0005179 // hormone activity // inferred from direct assay /// 0031707 // endothelin A receptor binding // inferred from direct assay /// 0031707 // endothelin A receptor binding // inferred from electronic annotation /// 0031708 // endothelin B receptor binding // inferred from direct assay /// 0031708 // endothelin B receptor binding // inferred from electronic annotation","chr6:12290311-12297426 (+) // 98.8 // p24.1"]
["11719786_at",-0.022743225,0.03396845,0.085587025,0.022743225,-0.07344532,-0.11259031,0.5473736,0.16399178,1.0619395,0.08670154,1.0619395,"up","SMCR7L",54471.0,"0008053 // mitochondrial fusion // inferred from mutant phenotype","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from direct assay /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr22:39896351-39914137 (+) // 94.16 // q13.1"]
["11747556_s_at",-0.13950968,-0.24946475,0.14128375,0.09541559,0.121819496,-0.09541559,0.7478062,0.41310635,-1.0891254,-0.12317006,1.0891254,"down","MIR4723 /// SARM1 /// TMEM199","100616388 /// 147007 /// 23098","0007165 // signal transduction // inferred from electronic annotation /// 0045087 // innate immune response // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr17:26684669-26708716 (+) // 99.33 // q11.2"]
["11757808_s_at",-0.061252117,-0.018940449,0.018940926,0.06103754,-0.029482841,0.09463596,0.6121711,0.2260613,-1.0442599,-0.06248083,1.0442599,"down","RERE",473.0,"0006338 // chromatin remodeling // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006607 // NLS-bearing substrate import into nucleus // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation","0000118 // histone deacetylase complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008267 // poly-glutamine tract binding // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:8412464-8413291 (-) // 95.06 // p36.23"]
["11751853_s_at",-0.06249237,-0.008361816,-0.06411791,0.10078907,0.008362293,0.03673935,0.35208347,0.046630833,-1.067045,-0.093620986,1.067045,"down","MTAP",4507.0,"0000096 // sulfur amino acid metabolic process // traceable author statement /// 0006139 // nucleobase-containing compound metabolic process // traceable author statement /// 0006166 // purine ribonucleoside salvage // inferred from electronic annotation /// 0006595 // polyamine metabolic process // traceable author statement /// 0006738 // nicotinamide riboside catabolic process // inferred from direct assay /// 0009116 // nucleoside metabolic process // inferred from electronic annotation /// 0019509 // L-methionine salvage from methylthioadenosine // inferred from electronic annotation /// 0019509 // L-methionine salvage from methylthioadenosine // traceable author statement /// 0033574 // response to testosterone stimulus // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0003824 // catalytic activity // inferred from electronic annotation /// 0004645 // phosphorylase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0016763 // transferase activity, transferring pentosyl groups // inferred from electronic annotation /// 0017061 // S-methyl-5-thioadenosine phosphorylase activity // traceable author statement /// 0017061 // S-methyl-5-thioadenosine phosphorylase activity // inferred from electronic annotation","chr9:21802670-21818201 (+) // 71.33 // p21.3"]
["11716444_a_at",0.07436609,-0.0062918663,0.1703372,0.0062918663,-0.05040264,-0.037745,0.48902693,0.11854658,1.076804,0.106755726,1.076804,"up","KEAP1",9817.0,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0010629 // negative regulation of gene expression // inferred from electronic annotation /// 0042994 // cytoplasmic sequestering of transcription factor // inferred from electronic annotation /// 0045604 // regulation of epidermal cell differentiation // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005913 // cell-cell adherens junction // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from electronic annotation /// 0030496 // midbody // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr19:10596800-10614417 (-) // 94.83 // p13.2"]
["11744861_a_at",0.0085372925,-0.066845894,0.041535854,-0.034234047,0.023562908,-0.0085372925,0.99477494,0.983167,1.0005629,8.118736E-4,1.0005629,"up","DHRS7",51635.0,"0008152 // metabolic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","","0000166 // nucleotide binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation","chr14:60611496-60636581 (-) // 85.48 // q23.1"]
["11747464_a_at",0.0032892227,-0.0019741058,0.06908131,0.0019741058,-0.025539398,-0.008177757,0.61750203,0.23266432,1.0238799,0.03404648,1.0238799,"up","SERINC3",10955.0,"0006917 // induction of apoptosis // inferred from electronic annotation","0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","","chr20:43128607-43150737 (-) // 99.95 // q13.12"]
["11756863_a_at",0.02834487,-0.27231002,-0.076025486,-0.0077331066,0.0077331066,0.12212825,0.5907734,0.2039995,-1.1075509,-0.14737295,1.1075509,"down","DDX3Y",8653.0,"","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chrY:15016802-15026743 (+) // 98.9 // q11.21"]
["11746944_a_at",-0.06391525,0.18239975,0.00462389,-0.045589447,-0.00462389,0.05990839,0.87480223,0.6594622,1.0265504,0.037804477,1.0265504,"up","AGXT2",64902.0,"0006206 // pyrimidine base metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0009436 // glyoxylate catabolic process // inferred from direct assay /// 0019265 // glycine biosynthetic process, by transamination of glyoxylate // inferred from direct assay /// 0019481 // L-alanine catabolic process, by transamination // inferred from direct assay /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045429 // positive regulation of nitric oxide biosynthetic process // inferred from direct assay /// 0046135 // pyrimidine nucleoside catabolic process // traceable author statement /// 0046487 // glyoxylate metabolic process // traceable author statement /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement","0003824 // catalytic activity // inferred from electronic annotation /// 0008453 // alanine-glyoxylate transaminase activity // inferred from direct assay /// 0008453 // alanine-glyoxylate transaminase activity // traceable author statement /// 0008453 // alanine-glyoxylate transaminase activity // inferred from electronic annotation /// 0008483 // transaminase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation /// 0047305 // (R)-3-amino-2-methylpropionate-pyruvate transaminase activity // inferred from electronic annotation","chr5:35033115-35048054 (-) // 99.63 // p13.2"]
["11723058_a_at",-0.012768269,0.019883633,0.084281445,0.0020298958,-0.1060462,-0.0020298958,0.6069165,0.22099403,1.0466756,0.065814316,1.0466756,"up","TAP2",6891.0,"0001916 // positive regulation of T cell mediated cytotoxicity // not recorded /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0002481 // antigen processing and presentation of exogenous protein antigen via MHC class Ib, TAP-dependent // not recorded /// 0002485 // antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway, TAP-dependent // not recorded /// 0002489 // antigen processing and presentation of endogenous peptide antigen via MHC class Ib via ER pathway, TAP-dependent // not recorded /// 0002489 // antigen processing and presentation of endogenous peptide antigen via MHC class Ib via ER pathway, TAP-dependent // inferred from mutant phenotype /// 0002504 // antigen processing and presentation of peptide or polysaccharide antigen via MHC class II // inferred from electronic annotation /// 0002591 // positive regulation of antigen processing and presentation of peptide antigen via MHC class I // not recorded /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006952 // defense response // traceable author statement /// 0006955 // immune response // inferred from electronic annotation /// 0006968 // cellular defense response // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0015833 // peptide transport // not recorded /// 0015833 // peptide transport // inferred from genetic interaction /// 0015833 // peptide transport // inferred from electronic annotation /// 0015833 // peptide transport // traceable author statement /// 0019060 // intracellular transport of viral proteins in host cell // inferred from mutant phenotype /// 0019882 // antigen processing and presentation // inferred from electronic annotation /// 0019885 // antigen processing and presentation of endogenous peptide antigen via MHC class I // inferred from direct assay /// 0019885 // antigen processing and presentation of endogenous peptide antigen via MHC class I // inferred from mutant phenotype /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0046967 // cytosol to ER transport // inferred from mutant phenotype /// 0046968 // peptide antigen transport // inferred from direct assay /// 0046968 // peptide antigen transport // inferred from mutant phenotype /// 0055085 // transmembrane transport // not recorded /// 0055085 // transmembrane transport // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005743 // mitochondrial inner membrane // not recorded /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005886 // plasma membrane // not recorded /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030176 // integral to endoplasmic reticulum membrane // inferred from direct assay /// 0030670 // phagocytic vesicle membrane // traceable author statement /// 0042613 // MHC class II protein complex // inferred from electronic annotation /// 0042825 // TAP complex // not recorded /// 0042825 // TAP complex // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0005215 // transporter activity // inferred from direct assay /// 0005215 // transporter activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0015197 // peptide transporter activity // inferred from electronic annotation /// 0015197 // peptide transporter activity // inferred from genetic interaction /// 0015197 // peptide transporter activity // traceable author statement /// 0015421 // oligopeptide-transporting ATPase activity // not recorded /// 0015433 // peptide antigen-transporting ATPase activity // inferred from mutant phenotype /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0042288 // MHC class I protein binding // not recorded /// 0042605 // peptide antigen binding // not recorded /// 0042626 // ATPase activity, coupled to transmembrane movement of substances // inferred from electronic annotation /// 0046978 // TAP1 binding // not recorded /// 0046978 // TAP1 binding // inferred from physical interaction /// 0046979 // TAP2 binding // not recorded /// 0046980 // tapasin binding // not recorded /// 0046980 // tapasin binding // inferred from sequence or structural similarity","chr6:32793047-32806547 (-) // 76.62 // p21.32"]
["11747096_a_at",-0.013127327,-0.060557365,-0.12140179,0.013127327,0.030529976,0.080620766,0.3513322,0.046205398,-1.0765795,-0.10645479,1.0765795,"down","KCNK1",3775.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006813 // potassium ion transport // traceable author statement /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0035094 // response to nicotine // inferred from electronic annotation /// 0071805 // potassium ion transmembrane transport // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0008076 // voltage-gated potassium channel complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0031526 // brush border membrane // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005242 // inward rectifier potassium channel activity // traceable author statement /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005267 // potassium channel activity // inferred from electronic annotation","chr1:233749892-233808024 (+) // 93.57 // q42.2"]
["11742319_a_at",0.0,-0.11168265,-0.00828433,0.15018153,0.19795394,0.0,0.4390176,0.08851455,-1.11422,-0.15603414,1.11422,"down","KLK15",55554.0,"0006508 // proteolysis // inferred from electronic annotation /// 0006508 // proteolysis // non-traceable author statement","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // non-traceable author statement /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // traceable author statement /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr19:51328544-51334779 (-) // 86.69 // q13.33"]
["11739727_x_at",0.0187006,-0.0187006,0.07691097,-0.056803703,0.05287075,-0.04819584,0.73382086,0.3920729,1.0302634,0.04301326,1.0302634,"up","NAP1L1",4673.0,"0006260 // DNA replication // traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0006334 // nucleosome assembly // traceable author statement /// 0008284 // positive regulation of cell proliferation // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005678 // chromatin assembly complex // traceable author statement /// 0042470 // melanosome // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr12:76438671-76478738 (-) // 99.39 // q21.2"]
["11716901_s_at",0.040094376,0.013765335,-0.032711506,-0.013764858,0.013765335,-0.111670494,0.718324,0.36741725,1.0311632,0.044272706,1.0311632,"up","TGOLN2",10618.0,"","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005802 // trans-Golgi network // traceable author statement /// 0005802 // trans-Golgi network // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030133 // transport vesicle // traceable author statement","0005515 // protein binding // inferred from physical interaction","chr2:85545145-85555407 (-) // 91.76 // p11.2"]
["11746783_x_at",0.07244825,-0.0842886,0.065056324,-0.023856163,0.00836134,-0.008360863,0.8686345,0.64654905,1.0179669,0.025690604,1.0179669,"up","FKBP9",11328.0,"0000413 // protein peptidyl-prolyl isomerization // not recorded /// 0000413 // protein peptidyl-prolyl isomerization // inferred from electronic annotation /// 0006457 // protein folding // inferred from sequence or structural similarity /// 0006457 // protein folding // inferred from electronic annotation /// 0018208 // peptidyl-proline modification // not recorded","0005783 // endoplasmic reticulum // not recorded /// 0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0016020 // membrane // not recorded","0003755 // peptidyl-prolyl cis-trans isomerase activity // not recorded /// 0003755 // peptidyl-prolyl cis-trans isomerase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from sequence or structural similarity /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005528 // FK506 binding // not recorded /// 0016853 // isomerase activity // inferred from electronic annotation","chr7:32997085-33046521 (+) // 99.91 // p14.3"]
["11716339_a_at",0.13754082,0.09368706,0.1644268,-0.09368706,-0.2811761,-0.14585352,0.17393847,0.0068420377,1.2358102,0.30545714,1.2358102,"up","INSIG1",3638.0,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0006641 // triglyceride metabolic process // inferred from electronic annotation /// 0006695 // cholesterol biosynthetic process // inferred from electronic annotation /// 0006991 // response to sterol depletion // inferred from electronic annotation /// 0008152 // metabolic process // traceable author statement /// 0008202 // steroid metabolic process // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0010894 // negative regulation of steroid biosynthetic process // inferred from electronic annotation /// 0016126 // sterol biosynthetic process // inferred from electronic annotation /// 0030967 // ER-nuclear sterol response pathway // inferred from direct assay /// 0042472 // inner ear morphogenesis // inferred from electronic annotation /// 0042474 // middle ear morphogenesis // inferred from electronic annotation /// 0045599 // negative regulation of fat cell differentiation // inferred from electronic annotation /// 0045717 // negative regulation of fatty acid biosynthetic process // inferred from electronic annotation /// 0060021 // palate development // inferred from electronic annotation /// 0060363 // cranial suture morphogenesis // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr7:155089485-155101945 (+) // 96.86 // q36.2"]
["11718327_a_at",-0.025488377,0.013552189,-0.013552189,0.12419033,-0.14204931,0.09497309,0.8955875,0.70827293,-1.0239894,-0.034200836,1.0239894,"down","WWC3",55841.0,"","","","chrX:9983794-10112518 (+) // 94.73 // p22.2"]
["11726667_a_at",-0.3442669,-0.04355955,0.030553818,0.016628265,0.05278349,-0.016628265,0.67476004,0.30521625,-1.0993763,-0.13668531,1.0993763,"down","MFSD8",256471.0,"0006810 // transport // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","","chr4:128838960-128887139 (-) // 92.95 // q28.2"]
["11752657_a_at",0.13301468,0.13927746,-0.07561588,0.07561588,-0.08264351,-0.11313772,0.6810818,0.31357068,1.0759522,0.10561395,1.0759522,"up","DNMT3B",1789.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006306 // DNA methylation // non-traceable author statement /// 0006306 // DNA methylation // traceable author statement /// 0006306 // DNA methylation // inferred from electronic annotation /// 0006346 // methylation-dependent chromatin silencing // inferred from electronic annotation /// 0006349 // regulation of gene expression by genetic imprinting // inferred from electronic annotation /// 0010212 // response to ionizing radiation // inferred from electronic annotation /// 0010424 // DNA methylation on cytosine within a CG sequence // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from mutant phenotype /// 0031503 // protein complex localization // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0043045 // DNA methylation involved in embryo development // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from electronic annotation /// 0045814 // negative regulation of gene expression, epigenetic // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0046498 // S-adenosylhomocysteine metabolic process // inferred from electronic annotation /// 0046499 // S-adenosylmethioninamine metabolic process // inferred from electronic annotation /// 0051571 // positive regulation of histone H3-K4 methylation // inferred from mutant phenotype /// 0051573 // negative regulation of histone H3-K9 methylation // inferred from mutant phenotype /// 0071230 // cellular response to amino acid stimulus // inferred from electronic annotation /// 0090116 // C-5 methylation of cytosine // inferred from direct assay /// 0090116 // C-5 methylation of cytosine // non-traceable author statement /// 0090116 // C-5 methylation of cytosine // traceable author statement /// 0090116 // C-5 methylation of cytosine // inferred from electronic annotation","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000792 // heterochromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005720 // nuclear heterochromatin // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003714 // transcription corepressor activity // inferred from direct assay /// 0003714 // transcription corepressor activity // inferred from mutant phenotype /// 0003886 // DNA (cytosine-5-)-methyltransferase activity // inferred from direct assay /// 0003886 // DNA (cytosine-5-)-methyltransferase activity // non-traceable author statement /// 0003886 // DNA (cytosine-5-)-methyltransferase activity // traceable author statement /// 0003886 // DNA (cytosine-5-)-methyltransferase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0009008 // DNA-methyltransferase activity // non-traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0045322 // unmethylated CpG binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051718 // DNA (cytosine-5-)-methyltransferase activity, acting on CpG substrates // inferred from electronic annotation","chr20:31350423-31388709 (+) // 99.77 // q11.21"]
["11749090_a_at",0.0,-0.03361845,0.0,-0.046957016,0.02600956,0.0,0.9573801,0.8694628,-1.002932,-0.0042237244,1.002932,"down","FOXP1",27086.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0002053 // positive regulation of mesenchymal cell proliferation // not recorded /// 0002053 // positive regulation of mesenchymal cell proliferation // inferred from electronic annotation /// 0002329 // pre-B cell differentiation // not recorded /// 0002329 // pre-B cell differentiation // inferred from electronic annotation /// 0002639 // positive regulation of immunoglobulin production // not recorded /// 0002639 // positive regulation of immunoglobulin production // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007389 // pattern specification process // not recorded /// 0007507 // heart development // inferred from electronic annotation /// 0007519 // skeletal muscle tissue development // not recorded /// 0007519 // skeletal muscle tissue development // inferred from electronic annotation /// 0008045 // motor axon guidance // inferred from electronic annotation /// 0009790 // embryo development // not recorded /// 0009790 // embryo development // inferred from electronic annotation /// 0021517 // ventral spinal cord development // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0033152 // immunoglobulin V(D)J recombination // not recorded /// 0033152 // immunoglobulin V(D)J recombination // inferred from electronic annotation /// 0045214 // sarcomere organization // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048745 // smooth muscle tissue development // not recorded /// 0048745 // smooth muscle tissue development // inferred from electronic annotation /// 0050679 // positive regulation of epithelial cell proliferation // inferred from electronic annotation /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // not recorded /// 0055007 // cardiac muscle cell differentiation // not recorded /// 0055007 // cardiac muscle cell differentiation // inferred from electronic annotation /// 0060043 // regulation of cardiac muscle cell proliferation // inferred from electronic annotation /// 0060501 // positive regulation of epithelial cell proliferation involved in lung morphogenesis // not recorded /// 0072358 // cardiovascular system development // inferred from electronic annotation /// 2000727 // positive regulation of cardiac muscle cell differentiation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // not recorded /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // not recorded","0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // not recorded /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // not recorded /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // not recorded /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008134 // transcription factor binding // not recorded /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008301 // DNA binding, bending // not recorded /// 0042803 // protein homodimerization activity // not recorded /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // not recorded /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr3:71005925-71592708 (-) // 98.12 // p13"]
["11719510_at",0.13063574,-0.06035614,0.24434805,0.053168297,-0.09947634,-0.053168297,0.62190604,0.23852079,1.1004051,0.13803473,1.1004051,"up","HELZ",9931.0,"","0005634 // nucleus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:65066559-65242105 (-) // 94.74 // q24.2"]
["11753191_a_at",-0.17263126,-0.017947674,-0.15772057,0.15976286,0.017947197,0.15479851,0.29352236,0.028541164,-1.1703467,-0.22693601,1.1703467,"down","SLC17A5",26503.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006820 // anion transport // traceable author statement /// 0008643 // carbohydrate transport // inferred from electronic annotation /// 0015739 // sialic acid transport // inferred from direct assay /// 0015739 // sialic acid transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005765 // lysosomal membrane // traceable author statement /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation","0005351 // sugar:hydrogen symporter activity // traceable author statement /// 0015136 // sialic acid transmembrane transporter activity // inferred from direct assay /// 0015136 // sialic acid transmembrane transporter activity // inferred from electronic annotation /// 0015293 // symporter activity // inferred from electronic annotation","chr6:74325034-74363696 (-) // 98.58 // q13"]
["11737275_x_at",0.022059917,0.006025791,-0.082289696,0.10664892,-0.006025791,-0.16149426,0.9939923,0.980215,1.0015416,0.002222367,1.0015416,"up","WDR52",55779.0,"","","","chr3:113081539-113160457 (-) // 98.48 // q13.2"]
["11757003_x_at",-0.0061388016,-0.012073517,0.09222984,0.020342827,0.0061388016,-0.05273342,0.77388287,0.45612007,1.0234376,0.03342317,1.0234376,"up","RPL6",6128.0,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral infectious cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // traceable author statement","chr12:112843006-112847362 (-) // 100.0 // q24.13"]
["11721135_s_at",0.1340456,0.05965519,0.18028927,-0.05965519,-0.07261467,-0.09849644,0.16077393,0.005484443,1.1499614,0.20158537,1.1499614,"up","IGFBP3",3486.0,"0001558 // regulation of cell growth // inferred from electronic annotation /// 0001933 // negative regulation of protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // inferred from genetic interaction /// 0009968 // negative regulation of signal transduction // non-traceable author statement /// 0014912 // negative regulation of smooth muscle cell migration // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0045663 // positive regulation of myoblast differentiation // inferred from direct assay /// 0048662 // negative regulation of smooth muscle cell proliferation // inferred from direct assay","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0016942 // insulin-like growth factor binding protein complex // inferred by curator /// 0016942 // insulin-like growth factor binding protein complex // inferred from electronic annotation /// 0042567 // insulin-like growth factor ternary complex // inferred from electronic annotation /// 0042568 // insulin-like growth factor binary complex // inferred from electronic annotation","0001968 // fibronectin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005520 // insulin-like growth factor binding // non-traceable author statement /// 0005520 // insulin-like growth factor binding // inferred from electronic annotation /// 0008160 // protein tyrosine phosphatase activator activity // inferred from direct assay /// 0019838 // growth factor binding // inferred from electronic annotation /// 0031994 // insulin-like growth factor I binding // inferred from physical interaction /// 0031994 // insulin-like growth factor I binding // inferred from electronic annotation /// 0031995 // insulin-like growth factor II binding // inferred from electronic annotation /// 0046872 // metal ion binding // non-traceable author statement","chr7:45951844-45960871 (-) // 95.52 // p12.3"]
["11737988_at",-0.10056472,0.095009804,-0.013163805,0.11697173,-0.013163805,0.013163805,0.8236013,0.548584,-1.0318477,-0.04523007,1.0318477,"down","ECT2L",345930.0,"0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation","chr6:139117254-139225207 (+) // 91.91 // q24.1"]
["11730848_at",0.019256592,-0.01579237,-0.013764381,0.008774757,-0.008774757,0.03982067,0.7459627,0.41036367,-1.0116477,-0.01670697,1.0116477,"down","ABHD13",84945.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0016787 // hydrolase activity // inferred from electronic annotation","chr13:108870726-108886602 (+) // 99.4 // q33.3"]
["11755461_a_at",0.05047226,-0.10861969,0.005561352,-0.0010762215,-0.09405422,0.0010762215,0.9402409,0.8196865,1.0096272,0.013822716,1.0096272,"up","NXF3",56000.0,"0006406 // mRNA export from nucleus // inferred from direct assay /// 0006406 // mRNA export from nucleus // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0016973 // poly(A)+ mRNA export from nucleus // inferred from electronic annotation /// 0051028 // mRNA transport // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0042272 // nuclear RNA export factor complex // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003729 // mRNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chrX:102330751-102336663 (-) // 98.46 // q22.1"]
["11729942_at",0.06096363,0.15777445,0.20222092,-0.13392782,-0.06096363,-0.21637392,0.20122269,0.010597171,1.2120155,0.27740815,1.2120155,"up","TMEM56",148534.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr1:95582847-95663159 (+) // 94.92 // p21.3"]
["11734256_a_at",-0.07013941,0.1048255,0.060106754,-0.020212173,0.020212173,-0.04698658,0.76748055,0.44620824,1.0333004,0.047259733,1.0333004,"up","PRKAG3",53632.0,"0005978 // glycogen biosynthetic process // inferred from electronic annotation /// 0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0007050 // cell cycle arrest // traceable author statement /// 0007243 // intracellular protein kinase cascade // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0015758 // glucose transport // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0046320 // regulation of fatty acid oxidation // traceable author statement","0005829 // cytosol // traceable author statement /// 0031588 // AMP-activated protein kinase complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004679 // AMP-activated protein kinase activity // traceable author statement /// 0004679 // AMP-activated protein kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from direct assay","chr2:219687105-219696539 (-) // 99.66 // q35"]
["11748782_a_at",-0.0013504028,-0.0441103,0.0013504028,-0.02291584,0.059695244,0.0023355484,0.730082,0.38597754,-1.0194151,-0.027741686,1.0194151,"down","CASP9",842.0,"0006508 // proteolysis // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0008629 // induction of apoptosis by intracellular signals // traceable author statement /// 0008635 // activation of cysteine-type endopeptidase activity involved in apoptotic process by cytochrome c // traceable author statement /// 0009411 // response to UV // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043525 // positive regulation of neuron apoptotic process // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0071549 // cellular response to dexamethasone stimulus // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0043293 // apoptosome // inferred from direct assay","0004197 // cysteine-type endopeptidase activity // inferred from electronic annotation /// 0004197 // cysteine-type endopeptidase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008047 // enzyme activator activity // traceable author statement /// 0008233 // peptidase activity // inferred from direct assay /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr1:15818860-15850695 (-) // 89.02 // p36.21"]
["11752583_a_at",0.017673016,-0.017673016,0.10620117,-0.05819273,0.02732563,-0.11699581,0.590432,0.20364794,1.0604584,0.08468805,1.0604584,"up","CD6",923.0,"0007155 // cell adhesion // inferred from electronic annotation","0005887 // integral to plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005044 // scavenger receptor activity // inferred from electronic annotation","chr11:60739337-60786793 (+) // 99.94 // q12.2"]
["11754993_s_at",0.05545616,0.0271492,0.05500889,-0.0271492,-0.04065323,-0.037481308,0.10107897,0.0013694224,1.057726,0.08096599,1.057726,"up","PXDN",7837.0,"0001960 // negative regulation of cytokine-mediated signaling pathway // non-traceable author statement /// 0006955 // immune response // non-traceable author statement /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0030198 // extracellular matrix organization // inferred from direct assay /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0042744 // hydrogen peroxide catabolic process // inferred from direct assay /// 0042744 // hydrogen peroxide catabolic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from electronic annotation","0004601 // peroxidase activity // inferred from direct assay /// 0004601 // peroxidase activity // inferred from electronic annotation /// 0005152 // interleukin-1 receptor antagonist activity // non-traceable author statement /// 0005201 // extracellular matrix structural constituent // inferred from direct assay /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0020037 // heme binding // inferred from direct assay /// 0020037 // heme binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:1636854-1640836 (-) // 95.59 // p25.3"]
["11727297_a_at",-0.056406975,0.056406975,0.06966877,-0.081772804,-0.11893034,0.17115545,0.9160225,0.7563516,1.0231886,0.03307208,1.0231886,"up","TGFB3",7043.0,"0000187 // activation of MAPK activity // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from direct assay /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from sequence or structural similarity /// 0002576 // platelet degranulation // traceable author statement /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from sequence or structural similarity /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from direct assay /// 0007184 // SMAD protein import into nucleus // inferred from electronic annotation /// 0007435 // salivary gland morphogenesis // inferred from expression pattern /// 0007565 // female pregnancy // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008156 // negative regulation of DNA replication // inferred from mutant phenotype /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from sequence or structural similarity /// 0009790 // embryo development // inferred from electronic annotation /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0010718 // positive regulation of epithelial to mesenchymal transition // inferred from direct assay /// 0010718 // positive regulation of epithelial to mesenchymal transition // inferred from electronic annotation /// 0010718 // positive regulation of epithelial to mesenchymal transition // inferred from sequence or structural similarity /// 0010862 // positive regulation of pathway-restricted SMAD protein phosphorylation // inferred from electronic annotation /// 0010862 // positive regulation of pathway-restricted SMAD protein phosphorylation // inferred from sequence or structural similarity /// 0010936 // negative regulation of macrophage cytokine production // inferred from direct assay /// 0016049 // cell growth // inferred from electronic annotation /// 0022601 // menstrual cycle phase // inferred from expression pattern /// 0030168 // platelet activation // traceable author statement /// 0030501 // positive regulation of bone mineralization // inferred from expression pattern /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0030879 // mammary gland development // inferred from electronic annotation /// 0030879 // mammary gland development // inferred from sequence or structural similarity /// 0032570 // response to progesterone stimulus // inferred from direct assay /// 0032967 // positive regulation of collagen biosynthetic process // inferred from mutant phenotype /// 0034616 // response to laminar fluid shear stress // inferred from electronic annotation /// 0040007 // growth // inferred from electronic annotation /// 0042060 // wound healing // inferred from electronic annotation /// 0042476 // odontogenesis // non-traceable author statement /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from sequence or structural similarity /// 0043627 // response to estrogen stimulus // inferred from electronic annotation /// 0043932 // ossification involved in bone remodeling // inferred from expression pattern /// 0045216 // cell-cell junction organization // inferred from direct assay /// 0045740 // positive regulation of DNA replication // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0048286 // lung alveolus development // inferred from electronic annotation /// 0048286 // lung alveolus development // inferred from sequence or structural similarity /// 0048565 // digestive tract development // inferred from electronic annotation /// 0048702 // embryonic neurocranium morphogenesis // inferred from electronic annotation /// 0048839 // inner ear development // inferred from electronic annotation /// 0050714 // positive regulation of protein secretion // inferred from direct assay /// 0051491 // positive regulation of filopodium assembly // inferred from electronic annotation /// 0051491 // positive regulation of filopodium assembly // inferred from sequence or structural similarity /// 0051781 // positive regulation of cell division // inferred from electronic annotation /// 0060021 // palate development // inferred from electronic annotation /// 0060021 // palate development // inferred from sequence or structural similarity /// 0060325 // face morphogenesis // inferred from electronic annotation /// 0060325 // face morphogenesis // inferred from mutant phenotype /// 0060364 // frontal suture morphogenesis // inferred from electronic annotation /// 0060391 // positive regulation of SMAD protein import into nucleus // inferred from electronic annotation /// 0060391 // positive regulation of SMAD protein import into nucleus // inferred from sequence or structural similarity /// 0070483 // detection of hypoxia // inferred from direct assay /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred by curator /// 0009986 // cell surface // inferred from electronic annotation /// 0030141 // secretory granule // inferred from electronic annotation /// 0030315 // T-tubule // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from direct assay /// 0031093 // platelet alpha granule lumen // traceable author statement /// 0043025 // neuronal cell body // inferred from electronic annotation","0005114 // type II transforming growth factor beta receptor binding // inferred from direct assay /// 0005114 // type II transforming growth factor beta receptor binding // inferred from physical interaction /// 0005160 // transforming growth factor beta receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // inferred from electronic annotation /// 0034713 // type I transforming growth factor beta receptor binding // inferred from direct assay /// 0042802 // identical protein binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0050431 // transforming growth factor beta binding // inferred from direct assay","chr14:76424441-76448309 (-) // 95.76 // q24.3"]
["11759734_at",0.2512741,0.10740304,-0.2607355,-0.03253913,-0.04372692,0.03253913,0.9244638,0.774838,1.0332739,0.047222782,1.0332739,"up","BLZF1",8548.0,"0001558 // regulation of cell growth // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007030 // Golgi organization // inferred from direct assay /// 0008283 // cell proliferation // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0043001 // Golgi to plasma membrane protein transport // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005796 // Golgi lumen // inferred from electronic annotation","0003677 // DNA binding // non-traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0019899 // enzyme binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction","chr1:169337227-169346619 (+) // 99.3 // q24.2"]
["11754913_a_at",0.13930702,-0.032591343,0.2145195,-0.21505022,-0.10221577,0.032591343,0.49095437,0.119670466,1.150268,0.20196998,1.150268,"up","TRPS1",7227.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0001501 // skeletal system development // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006607 // NLS-bearing substrate import into nucleus // traceable author statement /// 0032330 // regulation of chondrocyte differentiation // inferred from sequence or structural similarity /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008270 // zinc ion binding // traceable author statement /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:116426129-116616688 (-) // 95.89 // q23.3"]
["11762201_x_at",-0.027099848,-0.22877288,0.02709961,-0.26314735,0.06896496,0.15409541,0.88908625,0.6950299,-1.04456,-0.0628953,1.04456,"down","CDHR4",389118.0,"0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr3:49835664-49837268 (-) // 75.0 // p21.31"]
["11738523_a_at",0.02809,-0.1331408,0.08397627,-0.027033567,0.027033329,-0.043953896,0.9739036,0.91673565,1.0053003,0.007626499,1.0053003,"up","NLRP3",114548.0,"0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // non-traceable author statement /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from electronic annotation /// 0006952 // defense response // traceable author statement /// 0006954 // inflammatory response // inferred from mutant phenotype /// 0007165 // signal transduction // non-traceable author statement /// 0009595 // detection of biotic stimulus // traceable author statement /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0032621 // interleukin-18 production // inferred from electronic annotation /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0042347 // negative regulation of NF-kappaB import into nucleus // inferred from direct assay /// 0043280 // positive regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0045087 // innate immune response // traceable author statement /// 0050701 // interleukin-1 secretion // inferred from electronic annotation /// 0050718 // positive regulation of interleukin-1 beta secretion // inferred from direct assay /// 0050728 // negative regulation of inflammatory response // inferred from mutant phenotype /// 0051259 // protein oligomerization // traceable author statement /// 0051607 // defense response to virus // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0042834 // peptidoglycan binding // traceable author statement","chr1:247581350-247612404 (+) // 87.98 // q44"]
["11716657_at",-0.00784111,0.009495258,-0.077651024,-0.004902363,0.0049028397,0.07067108,0.6253587,0.24237001,-1.0344683,-0.048889425,1.0344683,"down","TRAF4",9618.0,"0006915 // apoptotic process // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007585 // respiratory gaseous exchange // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0030323 // respiratory tube development // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0045860 // positive regulation of protein kinase activity // inferred from direct assay /// 0046330 // positive regulation of JNK cascade // inferred from direct assay /// 0090073 // positive regulation of protein homodimerization activity // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005923 // tight junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0003677 // DNA binding // traceable author statement /// 0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0031996 // thioesterase binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050699 // WW domain binding // inferred from physical interaction","chr17:27071001-27077974 (+) // 95.09 // q11.2"]
["11749496_a_at",0.002963543,-0.002963066,-0.017987728,-0.007920265,0.051641464,0.003129959,0.6902693,0.3260525,-1.0150937,-0.02161288,1.0150937,"down","CUX1",1523.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0000301 // retrograde transport, vesicle recycling within Golgi // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006891 // intra-Golgi vesicle-mediated transport // inferred from electronic annotation /// 0007275 // multicellular organismal development // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0042491 // auditory receptor cell differentiation // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030173 // integral to Golgi membrane // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0030674 // protein binding, bridging // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr7:101459287-101926770 (+) // 99.61 // q22.1"]
["11726505_at",0.078985214,0.006975889,-0.13094091,-0.006975889,0.12539911,-0.025709629,0.8410874,0.5869942,-1.0323254,-0.045897778,1.0323254,"down","FUT9",10690.0,"0005975 // carbohydrate metabolic process // traceable author statement /// 0006486 // protein glycosylation // inferred from electronic annotation /// 0006486 // protein glycosylation // traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0036065 // fucosylation // traceable author statement /// 0036065 // fucosylation // inferred from electronic annotation /// 0042355 // L-fucose catabolic process // non-traceable author statement","0005794 // Golgi apparatus // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation","0008417 // fucosyltransferase activity // traceable author statement /// 0008417 // fucosyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0017083 // 4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase activity // inferred from electronic annotation /// 0046920 // alpha-(1->3)-fucosyltransferase activity // traceable author statement /// 0046920 // alpha-(1->3)-fucosyltransferase activity // inferred from electronic annotation","chr6:96463844-96663488 (+) // 90.23 // q16.1"]
["11747812_a_at",-0.08643961,0.0195961,0.13064957,0.028938293,-0.08105421,-0.0195961,0.82671934,0.5554346,1.0318067,0.04517273,1.0318067,"up","EGR3",1960.0,"0001938 // positive regulation of endothelial cell proliferation // inferred from mutant phenotype /// 0002042 // cell migration involved in sprouting angiogenesis // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007274 // neuromuscular synaptic transmission // inferred from electronic annotation /// 0007422 // peripheral nervous system development // inferred from electronic annotation /// 0007517 // muscle organ development // traceable author statement /// 0007623 // circadian rhythm // traceable author statement /// 0035767 // endothelial cell chemotaxis // inferred from mutant phenotype /// 0035924 // cellular response to vascular endothelial growth factor stimulus // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0044344 // cellular response to fibroblast growth factor stimulus // inferred from mutant phenotype","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:22547555-22549927 (-) // 97.42 // p21.3"]
["11740130_a_at",0.03044796,0.12112045,-0.22860193,0.13839197,-0.12698507,-0.03044796,0.9637662,0.8892903,-1.0134892,-0.019330781,1.0134892,"down","CACNA1B",774.0,"0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007269 // neurotransmitter secretion // inferred from electronic annotation /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0008016 // regulation of heart contraction // inferred from electronic annotation /// 0008217 // regulation of blood pressure // inferred from electronic annotation /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0048265 // response to pain // inferred from electronic annotation /// 0051899 // membrane depolarization // traceable author statement /// 0051925 // regulation of calcium ion transport via voltage-gated calcium channel activity // traceable author statement /// 0051925 // regulation of calcium ion transport via voltage-gated calcium channel activity // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0070588 // calcium ion transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005891 // voltage-gated calcium channel complex // inferred from electronic annotation /// 0005891 // voltage-gated calcium channel complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005245 // voltage-gated calcium channel activity // inferred from electronic annotation /// 0005245 // voltage-gated calcium channel activity // traceable author statement /// 0005262 // calcium channel activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008022 // protein C-terminus binding // inferred from physical interaction","chr9:140772240-141019075 (+) // 95.99 // q34.3"]
["11719846_a_at",-0.023667812,-0.030391693,0.028222084,0.009253025,-0.009252548,0.08132172,0.70256454,0.34332427,-1.0250682,-0.035719845,1.0250682,"down","TFPT",29844.0,"0006281 // DNA repair // inferred from electronic annotation /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from direct assay /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0031011 // Ino80 complex // inferred from direct assay","0003677 // DNA binding // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction","chr19:54610326-54619055 (-) // 95.68 // q13.42"]
["11733181_at",0.26379395,-0.05223155,-0.05223155,0.05223155,-0.06371808,0.21649647,0.9730966,0.9144094,-1.01061,-0.015226338,1.01061,"down","ETV1",2115.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0048935 // peripheral nervous system neuron development // traceable author statement","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr7:13930852-14029291 (-) // 92.33 // p21.2"]
["11729986_a_at",0.009263039,-0.05233717,-0.009263039,0.116369486,0.04805374,-0.04469824,0.6832436,0.31626037,-1.0405556,-0.057354048,1.0405556,"down","ROBO2",6092.0,"0001656 // metanephros development // inferred from sequence or structural similarity /// 0001657 // ureteric bud development // inferred from mutant phenotype /// 0006935 // chemotaxis // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from direct assay /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007411 // axon guidance // inferred from sequence or structural similarity /// 0007411 // axon guidance // non-traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007417 // central nervous system development // non-traceable author statement /// 0007420 // brain development // inferred from expression pattern /// 0016199 // axon midline choice point recognition // inferred from sequence or structural similarity /// 0021891 // olfactory bulb interneuron development // inferred from sequence or structural similarity /// 0030154 // cell differentiation // inferred from electronic annotation /// 0031290 // retinal ganglion cell axon guidance // inferred from sequence or structural similarity /// 0032870 // cellular response to hormone stimulus // inferred from expression pattern /// 0050772 // positive regulation of axonogenesis // inferred from direct assay /// 0050925 // negative regulation of negative chemotaxis // inferred from direct assay /// 0051964 // negative regulation of synapse assembly // inferred from sequence or structural similarity /// 0061364 // apoptotic process involved in luteolysis // inferred from expression pattern","0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030673 // axolemma // inferred from sequence or structural similarity","0005515 // protein binding // inferred from physical interaction /// 0008046 // axon guidance receptor activity // inferred from sequence or structural similarity /// 0008046 // axon guidance receptor activity // non-traceable author statement /// 0042802 // identical protein binding // inferred from direct assay","chr3:77089245-77696661 (+) // 99.37 // p12.3"]
["11763565_x_at",-0.037796974,0.0055708885,-0.055164814,0.0055708885,0.05208254,-0.0055708885,0.5182294,0.13948323,-1.03275,-0.046491075,1.03275,"down","ATP10B",23120.0,"0006812 // cation transport // inferred from electronic annotation /// 0015914 // phospholipid transport // inferred from electronic annotation /// 0045332 // phospholipid translocation // non-traceable author statement","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0004012 // phospholipid-translocating ATPase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0015662 // ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016820 // hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr5:160060261-160279219 (-) // 82.56 // q34"]
["11737041_a_at",-0.026355743,-0.07867813,-0.026293755,0.07120705,0.026293755,0.099357605,0.24007045,0.016462917,-1.078776,-0.10939533,1.078776,"down","PHLDB2",90102.0,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0016042 // lipid catabolic process // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0045111 // intermediate filament cytoskeleton // inferred from direct assay","0004629 // phospholipase C activity // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0008081 // phosphoric diester hydrolase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr3:111578567-111695362 (+) // 99.26 // q13.2"]
["11724971_a_at",-0.108567715,-0.07003999,0.070040226,0.21149373,0.16861176,-0.16179013,0.7690765,0.44851834,-1.0784513,-0.10896099,1.0784513,"down","FLT1",2321.0,"0000186 // activation of MAPKK activity // inferred from electronic annotation /// 0001525 // angiogenesis // inferred from electronic annotation /// 0001569 // patterning of blood vessels // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0002040 // sprouting angiogenesis // inferred from electronic annotation /// 0002548 // monocyte chemotaxis // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006935 // chemotaxis // inferred from electronic annotation /// 0006940 // regulation of smooth muscle contraction // inferred from electronic annotation /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // traceable author statement /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007565 // female pregnancy // traceable author statement /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0010863 // positive regulation of phospholipase C activity // inferred from mutant phenotype /// 0014068 // positive regulation of phosphatidylinositol 3-kinase cascade // inferred from mutant phenotype /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016477 // cell migration // inferred from mutant phenotype /// 0016477 // cell migration // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0030522 // intracellular receptor mediated signaling pathway // inferred from electronic annotation /// 0030949 // positive regulation of vascular endothelial growth factor receptor signaling pathway // inferred from direct assay /// 0035924 // cellular response to vascular endothelial growth factor stimulus // inferred from direct assay /// 0038084 // vascular endothelial growth factor signaling pathway // inferred from direct assay /// 0038084 // vascular endothelial growth factor signaling pathway // inferred from mutant phenotype /// 0038084 // vascular endothelial growth factor signaling pathway // traceable author statement /// 0038084 // vascular endothelial growth factor signaling pathway // inferred from electronic annotation /// 0043406 // positive regulation of MAP kinase activity // inferred from direct assay /// 0043410 // positive regulation of MAPK cascade // inferred from direct assay /// 0043552 // positive regulation of phosphatidylinositol 3-kinase activity // inferred from mutant phenotype /// 0045766 // positive regulation of angiogenesis // inferred from mutant phenotype /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0048010 // vascular endothelial growth factor receptor signaling pathway // inferred from direct assay /// 0048010 // vascular endothelial growth factor receptor signaling pathway // inferred from mutant phenotype /// 0048010 // vascular endothelial growth factor receptor signaling pathway // traceable author statement /// 0048010 // vascular endothelial growth factor receptor signaling pathway // inferred from electronic annotation /// 0048514 // blood vessel morphogenesis // inferred from sequence or structural similarity /// 0048514 // blood vessel morphogenesis // inferred from electronic annotation /// 0048598 // embryonic morphogenesis // inferred from sequence or structural similarity /// 0048598 // embryonic morphogenesis // inferred from electronic annotation /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // traceable author statement /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005021 // vascular endothelial growth factor-activated receptor activity // inferred from direct assay /// 0005021 // vascular endothelial growth factor-activated receptor activity // inferred from mutant phenotype /// 0005021 // vascular endothelial growth factor-activated receptor activity // inferred from electronic annotation /// 0005021 // vascular endothelial growth factor-activated receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019838 // growth factor binding // inferred from physical interaction /// 0019838 // growth factor binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from electronic annotation","chr13:28874483-29069265 (-) // 97.77 // q12.2"]
["11764175_at",-0.015299082,0.03274274,-0.07016277,-0.1658647,0.015299082,0.11673355,0.98428243,0.946302,-1.0043733,-0.006295599,1.0043733,"down","","","","","","chr16:54885551-54886170 (-) // 79.28 // q12.2"]
["11739728_a_at",-0.14578581,-0.19887447,0.009527206,0.036031246,-0.009527206,0.027910233,0.4801549,0.11268297,-1.0941793,-0.12984914,1.0941793,"down","RECQL",5965.0,"0000733 // DNA strand renaturation // inferred from direct assay /// 0006260 // DNA replication // inferred from electronic annotation /// 0006281 // DNA repair // inferred from electronic annotation /// 0006281 // DNA repair // traceable author statement /// 0006310 // DNA recombination // inferred from electronic annotation /// 0032508 // DNA duplex unwinding // inferred from direct assay /// 0032508 // DNA duplex unwinding // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0015630 // microtubule cytoskeleton // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0000739 // DNA strand annealing activity // inferred from direct assay /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003678 // DNA helicase activity // inferred from direct assay /// 0003678 // DNA helicase activity // traceable author statement /// 0004003 // ATP-dependent DNA helicase activity // traceable author statement /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0043140 // ATP-dependent 3'-5' DNA helicase activity // inferred from electronic annotation","chr12:21621844-21654603 (-) // 87.18 // p12.1"]
["11752902_a_at",0.065324545,0.0,-0.21045947,-0.054552555,0.07329607,0.0,0.8377156,0.58097494,-1.03859,-0.054626174,1.03859,"down","PLP1",5354.0,"0007229 // integrin-mediated signaling pathway // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0008219 // cell death // inferred from electronic annotation /// 0008366 // axon ensheathment // traceable author statement /// 0008366 // axon ensheathment // inferred from electronic annotation /// 0010001 // glial cell differentiation // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0022010 // central nervous system myelination // inferred from electronic annotation /// 0042552 // myelination // inferred from electronic annotation /// 0042759 // long-chain fatty acid biosynthetic process // inferred from electronic annotation /// 0048469 // cell maturation // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0043209 // myelin sheath // inferred from electronic annotation /// 0043218 // compact myelin // inferred from electronic annotation","0005198 // structural molecule activity // traceable author statement /// 0005198 // structural molecule activity // inferred from electronic annotation /// 0019911 // structural constituent of myelin sheath // inferred from electronic annotation","chrX:103031801-103046078 (+) // 100.0 // q22.2"]
["11738848_at",-0.0616529,-0.22690272,0.016455889,-0.016455889,0.053384304,0.02631402,0.59408593,0.20820679,-1.0805612,-0.11178073,1.0805612,"down","GFRAL",389400.0,"0006916 // anti-apoptosis // inferred from electronic annotation /// 0031098 // stress-activated protein kinase signaling cascade // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation","chr6:55192266-55267291 (+) // 79.76 // p12.1"]
["11748343_a_at",0.0406065,0.008397102,0.15719223,-0.008397102,-0.09575844,-0.04070568,0.43653503,0.087170675,1.0844917,0.11701905,1.0844917,"up","RABL5",64792.0,"0007264 // small GTPase mediated signal transduction // inferred from electronic annotation","","0000166 // nucleotide binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation","chr7:100958359-100965256 (-) // 99.2 // q22.1"]
["11734497_at",-0.022371769,0.053091526,-0.042068005,0.0127744675,-0.012774229,0.014215469,0.9303439,0.7924545,-1.005924,-0.0085212905,1.005924,"down","C6orf222",389384.0,"","","","chr6:36283533-36304662 (-) // 83.29 // p21.31"]
["11727276_at",0.02342558,0.17140484,0.039947033,-0.033617973,-0.09457588,-0.023426056,0.40264347,0.06780663,1.0933832,0.1287991,1.0933832,"up","ZNF77",58492.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:2933215-2944969 (-) // 97.19 // p13.3"]
["11728169_s_at",-0.08559799,0.058334112,-0.058333874,-0.07385874,0.21179938,0.17819285,0.63306844,0.25303513,-1.0972638,-0.13391043,1.0972638,"down","LCA5",167691.0,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0005932 // microtubule basal body // inferred from electronic annotation /// 0035085 // cilium axoneme // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr6:80194708-80247147 (-) // 94.58 // q14.1"]
["11738357_x_at",-0.019395828,0.12444067,0.19731522,0.019395828,-0.110706806,-0.19072104,0.4451699,0.09210487,1.1445634,0.19479743,1.1445634,"up","OR4N3P",390539.0,"","","","chr14:20295847-20296539 (+) // 95.27 // q11.2 /// chr15:22413701-22414393 (+) // 99.0 // q11.2"]
["11737612_a_at",0.11953783,-0.15230227,0.0675025,0.11225414,-0.22337008,-0.0675025,0.8512936,0.60764647,1.050531,0.07111877,1.050531,"up","ZDHHC21",340481.0,"0001942 // hair follicle development // inferred from electronic annotation /// 0018230 // peptidyl-L-cysteine S-palmitoylation // inferred from mutant phenotype /// 0018345 // protein palmitoylation // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046209 // nitric oxide metabolic process // traceable author statement /// 0048733 // sebaceous gland development // inferred from electronic annotation /// 0050999 // regulation of nitric-oxide synthase activity // traceable author statement","0000139 // Golgi membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0016409 // palmitoyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:14617033-14693469 (-) // 93.85 // p22.3"]
["11740070_a_at",0.089960575,0.13241029,-0.026022434,-0.1429789,0.026022434,-0.083370924,0.49900088,0.1257328,1.0959829,0.1322253,1.0959829,"up","KRT222",125113.0,"","0005882 // intermediate filament // inferred from electronic annotation","0005198 // structural molecule activity // inferred from electronic annotation","chr17:38811873-38821429 (-) // 99.54 // q21.2"]
["11719747_a_at",1.0681152E-4,0.016296387,-1.0681152E-4,-0.08915186,-0.039892197,0.05430603,0.80584085,0.51406103,1.0212562,0.030344848,1.0212562,"up","NF2",4771.0,"0001707 // mesoderm formation // inferred from electronic annotation /// 0001953 // negative regulation of cell-matrix adhesion // traceable author statement /// 0006469 // negative regulation of protein kinase activity // inferred from electronic annotation /// 0007398 // ectoderm development // inferred from electronic annotation /// 0008156 // negative regulation of DNA replication // inferred from mutant phenotype /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0014010 // Schwann cell proliferation // inferred from mutant phenotype /// 0022408 // negative regulation of cell-cell adhesion // inferred from direct assay /// 0030036 // actin cytoskeleton organization // inferred from mutant phenotype /// 0030336 // negative regulation of cell migration // traceable author statement /// 0035330 // regulation of hippo signaling cascade // inferred from mutant phenotype /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042475 // odontogenesis of dentin-containing tooth // inferred from electronic annotation /// 0042518 // negative regulation of tyrosine phosphorylation of Stat3 protein // inferred from direct assay /// 0042524 // negative regulation of tyrosine phosphorylation of Stat5 protein // inferred from direct assay /// 0043409 // negative regulation of MAPK cascade // inferred from electronic annotation /// 0045216 // cell-cell junction organization // inferred from electronic annotation /// 0046426 // negative regulation of JAK-STAT cascade // inferred from direct assay /// 0051496 // positive regulation of stress fiber assembly // inferred from mutant phenotype /// 0070306 // lens fiber cell differentiation // inferred from electronic annotation","0001726 // ruffle // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0005856 // cytoskeleton // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005912 // adherens junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0019898 // extrinsic to membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030175 // filopodium // inferred from electronic annotation /// 0030864 // cortical actin cytoskeleton // inferred from electronic annotation /// 0031527 // filopodium membrane // inferred from electronic annotation /// 0032154 // cleavage furrow // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008092 // cytoskeletal protein binding // inferred from electronic annotation","chr22:29999543-30094589 (+) // 83.43 // q12.2"]
["11758860_at",0.30213022,-0.07071781,0.032805443,-0.032805443,0.19500065,-0.2430501,0.8147597,0.5320147,1.0829933,0.115024276,1.0829933,"up","HNRNPU",3192.0,"0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0006396 // RNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0070934 // CRD-mediated mRNA stabilization // inferred from mutant phenotype","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0030530 // heterogeneous nuclear ribonucleoprotein complex // traceable author statement /// 0070937 // CRD-mediated mRNA stability complex // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation","chr1:245012757-245028025 (-) // 97.44 // q44"]
["11730987_at",0.11839032,-0.080148935,-0.05821538,0.2559216,0.010810614,-0.010810614,0.76121247,0.43512166,-1.065821,-0.091965236,1.065821,"down","SBSPON",157869.0,"0006955 // immune response // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from direct assay","0005044 // scavenger receptor activity // inferred from electronic annotation /// 0030247 // polysaccharide binding // inferred from electronic annotation","chr8:73976321-74005507 (-) // 87.27 // q21.11"]
["11726356_at",-0.012381554,0.22566175,-0.04686737,0.02982378,0.012381554,-0.029425144,0.8423836,0.5896332,1.0361342,0.051210932,1.0361342,"up","ENPP1",5167.0,"0006091 // generation of precursor metabolites and energy // inferred from direct assay /// 0006766 // vitamin metabolic process // traceable author statement /// 0006767 // water-soluble vitamin metabolic process // traceable author statement /// 0006771 // riboflavin metabolic process // traceable author statement /// 0006796 // phosphate-containing compound metabolic process // inferred from direct assay /// 0006955 // immune response // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009143 // nucleoside triphosphate catabolic process // inferred from direct assay /// 0030279 // negative regulation of ossification // inferred from electronic annotation /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0030500 // regulation of bone mineralization // inferred by curator /// 0030505 // inorganic diphosphate transport // inferred from direct assay /// 0030643 // cellular phosphate ion homeostasis // inferred from direct assay /// 0030730 // sequestering of triglyceride // inferred from direct assay /// 0031214 // biomineral tissue development // inferred from electronic annotation /// 0031953 // negative regulation of protein autophosphorylation // inferred from direct assay /// 0032869 // cellular response to insulin stimulus // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement /// 0045599 // negative regulation of fat cell differentiation // inferred from direct assay /// 0045719 // negative regulation of glycogen biosynthetic process // inferred from direct assay /// 0046325 // negative regulation of glucose import // inferred from direct assay /// 0046627 // negative regulation of insulin receptor signaling pathway // inferred from direct assay /// 0046849 // bone remodeling // inferred from electronic annotation /// 0050427 // 3'-phosphoadenosine 5'-phosphosulfate metabolic process // inferred from direct assay","0005615 // extracellular space // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0016323 // basolateral plasma membrane // non-traceable author statement /// 0016323 // basolateral plasma membrane // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004528 // phosphodiesterase I activity // inferred from electronic annotation /// 0004551 // nucleotide diphosphatase activity // inferred from direct assay /// 0004551 // nucleotide diphosphatase activity // traceable author statement /// 0004551 // nucleotide diphosphatase activity // inferred from electronic annotation /// 0005044 // scavenger receptor activity // inferred from electronic annotation /// 0005158 // insulin receptor binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0030247 // polysaccharide binding // inferred from electronic annotation /// 0035529 // NADH pyrophosphatase activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047429 // nucleoside-triphosphate diphosphatase activity // inferred from direct assay /// 0050656 // 3'-phosphoadenosine 5'-phosphosulfate binding // inferred by curator","chr6:132129157-132216452 (+) // 69.28 // q23.2"]
["11732527_a_at",-0.02706647,0.073381186,-0.019429922,-0.076061964,0.019429922,0.03381157,0.91028816,0.74345523,1.0115505,0.016568411,1.0115505,"up","TBX5",6910.0,"0002009 // morphogenesis of an epithelium // inferred from electronic annotation /// 0003166 // bundle of His development // inferred from electronic annotation /// 0003181 // atrioventricular valve morphogenesis // inferred from electronic annotation /// 0003197 // endocardial cushion development // inferred from electronic annotation /// 0003218 // cardiac left ventricle formation // inferred from sequence or structural similarity /// 0003218 // cardiac left ventricle formation // inferred from electronic annotation /// 0003229 // ventricular cardiac muscle tissue development // inferred from electronic annotation /// 0003281 // ventricular septum development // inferred from sequence or structural similarity /// 0003281 // ventricular septum development // inferred from electronic annotation /// 0003283 // atrial septum development // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006917 // induction of apoptosis // inferred from direct assay /// 0007267 // cell-cell signaling // inferred from direct assay /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007389 // pattern specification process // inferred from electronic annotation /// 0007507 // heart development // inferred from direct assay /// 0007507 // heart development // inferred from mutant phenotype /// 0007507 // heart development // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0010467 // gene expression // traceable author statement /// 0010719 // negative regulation of epithelial to mesenchymal transition // traceable author statement /// 0030324 // lung development // inferred from electronic annotation /// 0030326 // embryonic limb morphogenesis // inferred from mutant phenotype /// 0030326 // embryonic limb morphogenesis // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // inferred from direct assay /// 0035115 // embryonic forelimb morphogenesis // inferred from electronic annotation /// 0035117 // embryonic arm morphogenesis // inferred from mutant phenotype /// 0035136 // forelimb morphogenesis // inferred from mutant phenotype /// 0035136 // forelimb morphogenesis // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0051891 // positive regulation of cardioblast differentiation // inferred from direct assay /// 0055007 // cardiac muscle cell differentiation // inferred from electronic annotation /// 0060039 // pericardium development // inferred from direct assay /// 0060044 // negative regulation of cardiac muscle cell proliferation // inferred from direct assay /// 0060045 // positive regulation of cardiac muscle cell proliferation // inferred from electronic annotation /// 0060980 // cell migration involved in coronary vasculogenesis // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement","0000977 // RNA polymerase II regulatory region sequence-specific DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from mutant phenotype /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from direct assay","chr12:114791731-114843968 (-) // 93.28 // q24.21"]
["11736918_x_at",-0.21581984,0.013041735,-0.17247152,-0.0048060417,0.0048060417,0.040800095,0.497687,0.124610506,-1.1008998,-0.13868318,1.1008998,"down","HIST1H2AH",85235.0,"0006334 // nucleosome assembly // inferred from electronic annotation","0000786 // nucleosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation","chr6:27114860-27115345 (+) // 98.58 // p22.1"]
["11741657_a_at",0.002401352,0.008282185,0.15730858,-0.024053097,-0.002401352,-0.042504787,0.5902195,0.20334762,1.0562737,0.07898371,1.0562737,"up","SYDE1",85360.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0032862 // activation of Rho GTPase activity // inferred from sequence or structural similarity /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005100 // Rho GTPase activator activity // inferred from sequence or structural similarity","chr19:15218213-15225789 (+) // 99.85 // p13.12"]
["11739312_a_at",0.04715538,-0.038787365,0.058030605,0.020396233,-0.2194891,-0.020396233,0.67160803,0.30037788,1.0682845,0.09529592,1.0682845,"up","HUS1",3364.0,"0000075 // cell cycle checkpoint // traceable author statement /// 0000077 // DNA damage checkpoint // inferred from mutant phenotype /// 0000077 // DNA damage checkpoint // inferred from electronic annotation /// 0000077 // DNA damage checkpoint // traceable author statement /// 0000724 // double-strand break repair via homologous recombination // inferred from electronic annotation /// 0001932 // regulation of protein phosphorylation // inferred from electronic annotation /// 0006260 // DNA replication // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0008156 // negative regulation of DNA replication // inferred from electronic annotation /// 0009411 // response to UV // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0031575 // mitotic cell cycle G1/S transition checkpoint // inferred from electronic annotation /// 0071479 // cellular response to ionizing radiation // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr7:48002884-48019252 (-) // 78.74 // p12.3"]
["11759481_at",-0.13988972,-0.048285484,0.039569378,0.002866745,0.11040878,-0.002866745,0.6287795,0.24598,-1.0616721,-0.086338244,1.0616721,"down","COPB1",1315.0,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006890 // retrograde vesicle-mediated transport, Golgi to ER // traceable author statement /// 0006891 // intra-Golgi vesicle-mediated transport // inferred from sequence or structural similarity /// 0006891 // intra-Golgi vesicle-mediated transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016044 // cellular membrane organization // traceable author statement /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0048205 // COPI coating of Golgi vesicle // traceable author statement","0000139 // Golgi membrane // traceable author statement /// 0000139 // Golgi membrane // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005798 // Golgi-associated vesicle // traceable author statement /// 0005798 // Golgi-associated vesicle // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030117 // membrane coat // inferred from electronic annotation /// 0030126 // COPI vesicle coat // inferred from sequence or structural similarity /// 0030126 // COPI vesicle coat // inferred from electronic annotation /// 0030137 // COPI-coated vesicle // inferred from electronic annotation /// 0030663 // COPI coated vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0005198 // structural molecule activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr11:14477750-14521398 (-) // 90.67 // p15.2"]
["11738898_a_at",0.0,0.15662122,-0.097509384,0.015924215,0.0,-0.053028345,0.89031523,0.69803905,1.0224795,0.032071967,1.0224795,"up","CLEC4C",170482.0,"0045087 // innate immune response // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0030246 // carbohydrate binding // inferred from electronic annotation","chr12:7882010-7900074 (-) // 67.46 // p13.31"]
["11748251_a_at",0.044301033,-0.006146431,0.006146431,0.011416435,-0.033600807,-0.010024071,0.64772785,0.27111045,1.0178347,0.02550323,1.0178347,"up","USP34",9736.0,"0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0071108 // protein K48-linked deubiquitination // inferred from direct assay /// 0090263 // positive regulation of canonical Wnt receptor signaling pathway // inferred from direct assay","","0004197 // cysteine-type endopeptidase activity // inferred from mutant phenotype /// 0004221 // ubiquitin thiolesterase activity // inferred from direct assay /// 0004221 // ubiquitin thiolesterase activity // inferred from electronic annotation /// 0004843 // ubiquitin-specific protease activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr2:61414599-61434023 (-) // 97.41 // p15"]
["11729218_a_at",0.048463345,0.03609705,0.0767622,-0.074355125,-0.03609705,-0.06491709,0.121101595,0.0025252483,1.0808982,0.11223061,1.0808982,"up","GCLC",2729.0,"0000096 // sulfur amino acid metabolic process // traceable author statement /// 0006534 // cysteine metabolic process // inferred from direct assay /// 0006536 // glutamate metabolic process // inferred from direct assay /// 0006749 // glutathione metabolic process // inferred from electronic annotation /// 0006750 // glutathione biosynthetic process // inferred from direct assay /// 0006750 // glutathione biosynthetic process // inferred from electronic annotation /// 0006750 // glutathione biosynthetic process // inferred from mutant phenotype /// 0006750 // glutathione biosynthetic process // traceable author statement /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0006916 // anti-apoptosis // inferred from direct assay /// 0006979 // response to oxidative stress // inferred from direct assay /// 0009408 // response to heat // inferred from direct assay /// 0009410 // response to xenobiotic stimulus // inferred from electronic annotation /// 0009725 // response to hormone stimulus // inferred from direct assay /// 0019852 // L-ascorbic acid metabolic process // inferred from electronic annotation /// 0031397 // negative regulation of protein ubiquitination // inferred from electronic annotation /// 0032436 // positive regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0045454 // cell redox homeostasis // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0046685 // response to arsenic-containing substance // inferred from electronic annotation /// 0050880 // regulation of blood vessel size // inferred from mutant phenotype /// 0051409 // response to nitrosative stress // inferred from electronic annotation /// 0051900 // regulation of mitochondrial depolarization // inferred from electronic annotation","0005737 // cytoplasm // not recorded /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0017109 // glutamate-cysteine ligase complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from direct assay /// 0004357 // glutamate-cysteine ligase activity // inferred from direct assay /// 0004357 // glutamate-cysteine ligase activity // inferred from mutant phenotype /// 0004357 // glutamate-cysteine ligase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016595 // glutamate binding // inferred from direct assay /// 0016874 // ligase activity // inferred from electronic annotation /// 0043531 // ADP binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0050662 // coenzyme binding // inferred from physical interaction","chr6:53362138-53409839 (-) // 97.62 // p12.1"]
["11749471_a_at",0.03463149,0.0,0.04198718,-0.003977537,0.0,-0.027157784,0.42755964,0.08096092,1.025209,0.03591798,1.025209,"up","MCF2",4168.0,"0006915 // apoptotic process // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0016358 // dendrite development // inferred from electronic annotation /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005624 // membrane fraction // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation","chrX:138664455-138790369 (-) // 99.52 // q27.1"]
["11724902_a_at",-0.010494709,0.00497818,0.1155777,0.074579716,-0.004978657,-0.022555351,0.8888502,0.69421846,1.0146662,0.021005195,1.0146662,"up","MAP3K14",9020.0,"0000165 // MAPK cascade // inferred from electronic annotation /// 0000186 // activation of MAPKK activity // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006955 // immune response // inferred from sequence or structural similarity /// 0006955 // immune response // inferred from electronic annotation /// 0007249 // I-kappaB kinase/NF-kappaB cascade // inferred from sequence or structural similarity /// 0007249 // I-kappaB kinase/NF-kappaB cascade // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0031295 // T cell costimulation // traceable author statement /// 0038061 // NIK/NF-kappaB cascade // inferred from sequence or structural similarity /// 0038061 // NIK/NF-kappaB cascade // inferred from electronic annotation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from mutant phenotype /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from reviewed computational analysis /// 0071260 // cellular response to mechanical stimulus // inferred from expression pattern","0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004704 // NF-kappaB-inducing kinase activity // inferred from sequence or structural similarity /// 0004704 // NF-kappaB-inducing kinase activity // inferred from electronic annotation /// 0004709 // MAP kinase kinase kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr17:43340490-43394511 (-) // 97.72 // q21.31"]
["11753161_a_at",-0.038415432,-0.075490475,-0.09329271,0.038414955,0.059532166,0.08656645,0.138353,0.0036143546,-1.0947267,-0.13057072,1.0947267,"down","HFE",3077.0,"0002474 // antigen processing and presentation of peptide antigen via MHC class I // inferred from electronic annotation /// 0006461 // protein complex assembly // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006826 // iron ion transport // traceable author statement /// 0006879 // cellular iron ion homeostasis // traceable author statement /// 0006898 // receptor-mediated endocytosis // traceable author statement /// 0006955 // immune response // inferred from electronic annotation /// 0007565 // female pregnancy // inferred from electronic annotation /// 0010106 // cellular response to iron ion starvation // inferred from electronic annotation /// 0019882 // antigen processing and presentation // inferred from electronic annotation /// 0042446 // hormone biosynthetic process // inferred from electronic annotation /// 0055072 // iron ion homeostasis // inferred from electronic annotation /// 0060586 // multicellular organismal iron ion homeostasis // inferred from electronic annotation","0005737 // cytoplasm // traceable author statement /// 0005769 // early endosome // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from direct assay /// 0042612 // MHC class I protein complex // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from direct assay /// 0045177 // apical part of cell // inferred from electronic annotation /// 0045178 // basal part of cell // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0055037 // recycling endosome // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr6:26087664-26094781 (+) // 99.74 // p22.2"]
["11764055_at",0.20463419,0.36348772,-0.0145459175,-0.104661465,-0.04827547,0.0145459175,0.4843772,0.11506933,1.1733681,0.23065567,1.1733681,"up","FMR1",2332.0,"0006810 // transport // inferred from electronic annotation /// 0007417 // central nervous system development // inferred from electronic annotation /// 0045947 // negative regulation of translational initiation // inferred from sequence or structural similarity /// 0051028 // mRNA transport // inferred from electronic annotation","0005625 // soluble fraction // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // traceable author statement /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005845 // mRNA cap binding complex // inferred from sequence or structural similarity /// 0042788 // polysomal ribosome // traceable author statement","0003723 // RNA binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0003729 // mRNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chrX:147024803-147030058 (+) // 89.43 // q27.3"]
["11744826_x_at",0.015091896,0.07075596,0.06074238,-0.03997898,-0.041218758,-0.015091896,0.2210402,0.013344304,1.0577216,0.08095997,1.0577216,"up","WBSCR22",114049.0,"0008152 // metabolic process // inferred from electronic annotation /// 0032259 // methylation // non-traceable author statement /// 0032259 // methylation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0008168 // methyltransferase activity // non-traceable author statement /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr7:73097914-73112541 (+) // 80.32 // q11.23"]
["11754770_a_at",-0.115933895,0.1225667,-0.036518574,0.05932951,-0.06849766,0.03651905,0.942045,0.8241058,-1.0133123,-0.019078933,1.0133123,"down","ZNF646",9726.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:31087222-31094826 (+) // 99.72 // p11.2"]
["11728477_at",-0.084368706,-0.04026985,-0.11380291,0.04026985,0.06664848,0.18217087,0.26731253,0.022291968,-1.1296247,-0.17584357,1.1296247,"down","CXCL3",2921.0,"0006935 // chemotaxis // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from electronic annotation /// 0006955 // immune response // inferred from electronic annotation /// 0030593 // neutrophil chemotaxis // inferred from sequence or structural similarity","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation","0005125 // cytokine activity // inferred from electronic annotation /// 0008009 // chemokine activity // inferred from sequence or structural similarity /// 0008009 // chemokine activity // inferred from electronic annotation","chr4:74902305-74904523 (-) // 91.73 // q13.3"]
["11747693_a_at",0.023656845,0.10810542,0.06258154,-0.1476059,-0.023657084,-0.2674191,0.35422572,0.04720141,1.1574972,0.21100865,1.1574972,"up","MME",4311.0,"0001822 // kidney development // inferred from expression pattern /// 0006508 // proteolysis // inferred from direct assay /// 0006508 // proteolysis // inferred from electronic annotation /// 0006518 // peptide metabolic process // inferred from sequence or structural similarity /// 0006518 // peptide metabolic process // inferred from electronic annotation /// 0019233 // sensory perception of pain // inferred from sequence or structural similarity /// 0019233 // sensory perception of pain // inferred from electronic annotation /// 0046449 // creatinine metabolic process // inferred from mutant phenotype /// 0050435 // beta-amyloid metabolic process // inferred from sequence or structural similarity /// 0050435 // beta-amyloid metabolic process // inferred from electronic annotation /// 0071345 // cellular response to cytokine stimulus // inferred from direct assay /// 0071492 // cellular response to UV-A // inferred from direct assay /// 0071493 // cellular response to UV-B // inferred from direct assay /// 0090399 // replicative senescence // inferred from expression pattern","0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0005903 // brush border // inferred from direct assay /// 0008021 // synaptic vesicle // inferred from sequence or structural similarity /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030424 // axon // inferred from sequence or structural similarity /// 0030424 // axon // inferred from electronic annotation /// 0030425 // dendrite // inferred from sequence or structural similarity /// 0030425 // dendrite // inferred from electronic annotation /// 0044306 // neuron projection terminus // inferred from sequence or structural similarity /// 0044306 // neuron projection terminus // inferred from electronic annotation /// 0045202 // synapse // inferred from sequence or structural similarity /// 0045202 // synapse // inferred from electronic annotation","0004175 // endopeptidase activity // inferred from direct assay /// 0004175 // endopeptidase activity // inferred from mutant phenotype /// 0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0004222 // metalloendopeptidase activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042277 // peptide binding // inferred from sequence or structural similarity /// 0042277 // peptide binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:154741912-154898638 (+) // 98.74 // q25.2"]
["11753349_a_at",0.057745934,0.17618465,0.3330617,-0.08155823,-0.12487078,-0.057745934,0.29139784,0.027945168,1.2117195,0.27705577,1.2117195,"up","NRG3",10718.0,"0001558 // regulation of cell growth // non-traceable author statement /// 0007171 // activation of transmembrane receptor protein tyrosine kinase activity // non-traceable author statement /// 0007243 // intracellular protein kinase cascade // inferred from electronic annotation /// 0007389 // pattern specification process // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0030879 // mammary gland development // inferred from electronic annotation /// 0060596 // mammary placode formation // inferred from electronic annotation","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005102 // receptor binding // inferred from electronic annotation /// 0008083 // growth factor activity // non-traceable author statement /// 0008083 // growth factor activity // inferred from electronic annotation /// 0030297 // transmembrane receptor protein tyrosine kinase activator activity // non-traceable author statement /// 0030971 // receptor tyrosine kinase binding // non-traceable author statement","chr10:83635839-84733923 (+) // 90.37 // q23.1"]
["11716487_a_at",-0.002418518,0.008413315,0.0052480698,-0.03484726,0.002418518,-0.027056694,0.48594528,0.116280645,1.0164759,0.023576032,1.0164759,"up","WDR59",79726.0,"","","","chr16:74907465-75019044 (-) // 98.1 // q23.1"]
["11741129_s_at",0.024267197,0.017616272,0.043004036,-0.030612946,-0.017617226,-0.057404518,0.20058419,0.010432246,1.0450032,0.063507326,1.0450032,"up","CAPN2",824.0,"0001666 // response to hypoxia // inferred from electronic annotation /// 0001824 // blastocyst development // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0007520 // myoblast fusion // inferred from electronic annotation","0000785 // chromatin // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005626 // insoluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0004198 // calcium-dependent cysteine-type endopeptidase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008092 // cytoskeletal protein binding // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // traceable author statement /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr1:223889253-223963718 (+) // 95.08 // q41"]
["11737627_at",-0.02230072,0.022300482,0.048578024,0.07920098,-0.12075186,-0.13432026,0.7125342,0.35777453,1.053227,0.07481634,1.053227,"up","NEK5",341676.0,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation","","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr13:52638904-52701801 (-) // 81.34 // q14.3"]
["11715526_s_at",0.017186165,0.0035629272,0.03930664,-0.0065994263,-0.0035629272,-0.03444481,0.4102049,0.071485855,1.024477,0.0348876,1.024477,"up","ATP6V1G2-DDX39B /// DDX39B /// SNORD84","100532737 /// 692199 /// 7919","0000245 // spliceosomal complex assembly // inferred from direct assay /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred from genetic interaction /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // inferred from direct assay /// 0006406 // mRNA export from nucleus // inferred from genetic interaction /// 0006810 // transport // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from direct assay /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010501 // RNA secondary structure unwinding // inferred from direct assay /// 0015992 // proton transport // inferred from electronic annotation /// 0046784 // intronless viral mRNA export from host nucleus // inferred from direct assay /// 0051028 // mRNA transport // inferred from electronic annotation","0000346 // transcription export complex // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005681 // spliceosomal complex // inferred from direct assay /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005687 // U4 snRNP // inferred from direct assay /// 0005688 // U6 snRNP // inferred from direct assay /// 0016471 // vacuolar proton-transporting V-type ATPase complex // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0004004 // ATP-dependent RNA helicase activity // inferred from direct assay /// 0004004 // ATP-dependent RNA helicase activity // traceable author statement /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0008186 // RNA-dependent ATPase activity // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016820 // hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances // inferred from electronic annotation /// 0017070 // U6 snRNA binding // inferred from direct assay /// 0030621 // U4 snRNA binding // inferred from direct assay /// 0043008 // ATP-dependent protein binding // inferred from direct assay","chr6:31498024-31510225 (-) // 87.48 // p21.33"]
["11749257_a_at",0.058897972,0.057081223,0.14413643,-0.057081223,-0.06935406,-0.12554073,0.18531476,0.008700171,1.1256024,0.17069726,1.1256024,"up","HERPUD1",9709.0,"0006874 // cellular calcium ion homeostasis // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0006986 // response to unfolded protein // inferred from expression pattern /// 0006986 // response to unfolded protein // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0030968 // endoplasmic reticulum unfolded protein response // inferred from electronic annotation /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr16:56966058-56977793 (+) // 92.15 // q13"]
["11725034_at",-0.19883132,0.008865595,0.12462306,0.13288474,-0.008865595,-0.21142864,0.9877622,0.9599332,1.0051116,0.0073556607,1.0051116,"up","SYP",6855.0,"0006810 // transport // inferred from electronic annotation /// 0006897 // endocytosis // inferred from sequence or structural similarity /// 0016188 // synaptic vesicle maturation // non-traceable author statement /// 0048169 // regulation of long-term neuronal synaptic plasticity // inferred from sequence or structural similarity /// 0048169 // regulation of long-term neuronal synaptic plasticity // inferred from electronic annotation /// 0048172 // regulation of short-term neuronal synaptic plasticity // inferred from sequence or structural similarity /// 0048172 // regulation of short-term neuronal synaptic plasticity // inferred from electronic annotation /// 0048499 // synaptic vesicle membrane organization // non-traceable author statement /// 0071310 // cellular response to organic substance // inferred from electronic annotation /// 2000474 // regulation of opioid receptor signaling pathway // inferred from sequence or structural similarity","0008021 // synaptic vesicle // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030285 // integral to synaptic vesicle membrane // non-traceable author statement /// 0030672 // synaptic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0042734 // presynaptic membrane // inferred from electronic annotation /// 0043229 // intracellular organelle // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0044306 // neuron projection terminus // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0048786 // presynaptic active zone // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation /// 0005509 // calcium ion binding // non-traceable author statement /// 0015485 // cholesterol binding // inferred from direct assay /// 0017075 // syntaxin-1 binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0042169 // SH2 domain binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from electronic annotation","chrX:49044267-49055496 (-) // 88.76 // p11.23"]
["11753302_s_at",-0.0032167435,0.0032167435,0.0051727295,-0.07183266,-0.016054153,0.021383286,0.7587438,0.42934027,1.0166986,0.023892054,1.0166986,"up","CBR1",873.0,"0008152 // metabolic process // inferred from electronic annotation /// 0017144 // drug metabolic process // inferred from direct assay /// 0042373 // vitamin K metabolic process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004090 // carbonyl reductase (NADPH) activity // inferred from direct assay /// 0004090 // carbonyl reductase (NADPH) activity // inferred from electronic annotation /// 0004090 // carbonyl reductase (NADPH) activity // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016655 // oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor // inferred from direct assay /// 0047021 // 15-hydroxyprostaglandin dehydrogenase (NADP+) activity // inferred from electronic annotation /// 0050221 // prostaglandin-E2 9-reductase activity // inferred from electronic annotation","chr21:37442336-37445272 (+) // 98.24 // q22.12"]
["11717316_x_at",-0.051389694,-0.017573357,0.038152695,5.311966E-4,0.021051407,-5.3215027E-4,0.8278703,0.5573105,-1.0120544,-0.017286902,1.0120544,"down","RPL38",6169.0,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral infectious cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // traceable author statement","chr17:72199817-72206378 (+) // 51.81 // q25.1"]
["11755699_a_at",-9.756088E-4,-0.20104766,-0.06280947,9.756088E-4,0.019716263,0.061894417,0.510191,0.1343467,-1.0835805,-0.115806326,1.0835805,"down","ACCSL",390110.0,"0009058 // biosynthetic process // inferred from electronic annotation /// 0042218 // 1-aminocyclopropane-1-carboxylate biosynthetic process // inferred from electronic annotation","","0003824 // catalytic activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016847 // 1-aminocyclopropane-1-carboxylate synthase activity // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation","chr11:44069564-44081500 (+) // 99.89 // p11.2"]
["11762647_at",0.011149645,-0.038716793,-0.011149406,-0.097654104,0.02401948,0.068305254,0.9475308,0.83999527,-1.007744,-0.011129129,1.007744,"down",-0.097654104,0.02401948,0.068305254,0.011149645,-0.038716793,-0.011149406]
["11749397_a_at",0.12252426,-0.016783237,0.19783735,0.016783237,-0.23996639,-0.15568256,0.4284751,0.08164528,1.1707892,0.2274814,1.1707892,"up","YWHAG",7532.0,"0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006469 // negative regulation of protein kinase activity // non-traceable author statement /// 0006605 // protein targeting // inferred from electronic annotation /// 0009966 // regulation of signal transduction // non-traceable author statement /// 0045664 // regulation of neuron differentiation // inferred from mutant phenotype /// 0048167 // regulation of synaptic plasticity // inferred from mutant phenotype","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0005080 // protein kinase C binding // inferred from physical interaction /// 0005159 // insulin-like growth factor receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008426 // protein kinase C inhibitor activity // non-traceable author statement /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0030971 // receptor tyrosine kinase binding // inferred from electronic annotation","chr7:75958814-75988306 (-) // 100.0 // q11.23"]
["11722011_a_at",0.036383152,-0.05663562,0.09039521,0.03091693,-0.07509184,-0.03091693,0.74659,0.41116485,1.0341257,0.048411537,1.0341257,"up","GIMAP4",55303.0,"","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation","chr7:150264364-150271043 (+) // 93.06 // q36.1"]
["11719166_x_at",0.036467075,-0.0029940605,0.25758505,0.0029940605,-0.069476604,-0.047166348,0.5686596,0.18301784,1.0980184,0.13490224,1.0980184,"up","DAB2IP",153090.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0007165 // signal transduction // inferred from electronic annotation /// 0007257 // activation of JUN kinase activity // inferred from direct assay /// 0009967 // positive regulation of signal transduction // inferred from direct assay /// 0010633 // negative regulation of epithelial cell migration // traceable author statement /// 0010719 // negative regulation of epithelial to mesenchymal transition // inferred from mutant phenotype /// 0030308 // negative regulation of cell growth // inferred from electronic annotation /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from mutant phenotype /// 0032320 // positive regulation of Ras GTPase activity // not recorded /// 0032320 // positive regulation of Ras GTPase activity // inferred from sequence or structural similarity /// 0032320 // positive regulation of Ras GTPase activity // inferred from electronic annotation /// 0034261 // negative regulation of Ras GTPase activity // inferred from mutant phenotype /// 0035414 // negative regulation of catenin import into nucleus // inferred from sequence or structural similarity /// 0035414 // negative regulation of catenin import into nucleus // inferred from electronic annotation /// 0042059 // negative regulation of epidermal growth factor receptor signaling pathway // inferred from sequence or structural similarity /// 0042059 // negative regulation of epidermal growth factor receptor signaling pathway // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043124 // negative regulation of I-kappaB kinase/NF-kappaB cascade // inferred from direct assay /// 0043407 // negative regulation of MAP kinase activity // inferred from direct assay /// 0043407 // negative regulation of MAP kinase activity // inferred from mutant phenotype /// 0043507 // positive regulation of JUN kinase activity // inferred from direct assay /// 0043507 // positive regulation of JUN kinase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0046580 // negative regulation of Ras protein signal transduction // not recorded /// 0046580 // negative regulation of Ras protein signal transduction // inferred by curator /// 0046580 // negative regulation of Ras protein signal transduction // inferred from electronic annotation /// 0048147 // negative regulation of fibroblast proliferation // inferred from sequence or structural similarity /// 0048147 // negative regulation of fibroblast proliferation // inferred from electronic annotation /// 0050680 // negative regulation of epithelial cell proliferation // inferred from mutant phenotype /// 0051056 // regulation of small GTPase mediated signal transduction // inferred from electronic annotation /// 0070059 // intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress // inferred from sequence or structural similarity /// 0070059 // intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress // inferred from electronic annotation /// 0071356 // cellular response to tumor necrosis factor // inferred from direct assay /// 0071356 // cellular response to tumor necrosis factor // inferred from electronic annotation /// 0071364 // cellular response to epidermal growth factor stimulus // inferred from sequence or structural similarity /// 0071364 // cellular response to epidermal growth factor stimulus // inferred from electronic annotation /// 0071901 // negative regulation of protein serine/threonine kinase activity // inferred from mutant phenotype /// 0071901 // negative regulation of protein serine/threonine kinase activity // inferred from electronic annotation /// 0071902 // positive regulation of protein serine/threonine kinase activity // inferred from mutant phenotype /// 0071902 // positive regulation of protein serine/threonine kinase activity // inferred from electronic annotation /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from mutant phenotype","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0031235 // intrinsic to internal side of plasma membrane // not recorded","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005099 // Ras GTPase activator activity // not recorded /// 0005099 // Ras GTPase activator activity // inferred from sequence or structural similarity /// 0005099 // Ras GTPase activator activity // inferred from electronic annotation /// 0005123 // death receptor binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0031435 // mitogen-activated protein kinase kinase kinase binding // inferred from physical interaction /// 0035591 // signaling adaptor activity // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0047485 // protein N-terminus binding // inferred from electronic annotation /// 0051721 // protein phosphatase 2A binding // inferred from direct assay /// 0071889 // 14-3-3 protein binding // inferred from direct assay","chr9:124329398-124547809 (+) // 98.13 // q33.2"]
["11729420_a_at",0.026844025,0.06442499,0.10887718,-0.17859602,-0.026844025,-0.075088024,0.31343502,0.034085095,1.1174612,0.16022475,1.1174612,"up","TTC26",79989.0,"","","","chr7:138818489-138874550 (+) // 99.86 // q34"]
["11725004_a_at",-0.051996708,0.083393574,-0.116889,0.11557102,-0.025557518,0.025557041,0.7422808,0.40456894,-1.0475513,-0.06702086,1.0475513,"down","C8orf58",541565.0,"","","","chr8:22457113-22461655 (+) // 88.07 // p21.3"]
["11738630_a_at",0.06309509,-0.09310675,0.012176514,0.047344208,-0.071428776,-0.012176514,0.97491956,0.9198922,1.0042664,0.006141994,1.0042664,"up","RBL1",5933.0,"0000080 // G1 phase of mitotic cell cycle // traceable author statement /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0000278 // mitotic cell cycle // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0043550 // regulation of lipid kinase activity // inferred from direct assay /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction","chr20:35631976-35724410 (-) // 96.2 // q11.23"]
["11756865_a_at",0.08375311,0.056872845,0.3161521,-0.09915924,-0.056872845,-0.108594894,0.3498699,0.045544356,1.1813761,0.24046832,1.1813761,"up","PACRGL",133015.0,"","","","chr4:20702080-20729119 (+) // 99.19 // p15.31"]
["11755144_a_at",0.024243593,-0.15789366,0.16865563,0.13437676,-0.07395196,-0.024243593,0.999226,0.99740946,-1.0002717,-3.918952E-4,1.0002717,"down","LOC100506695 /// PHF21B","100506695 /// 112885","","","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr22:45277044-45404874 (-) // 97.92 // q13.31"]
["11731614_x_at",0.0035362244,-0.04205513,0.08771324,0.027492523,-0.0035362244,-0.0145998,0.9160808,0.75681627,1.009247,0.01327922,1.009247,"up","ETFA",2108.0,"0006810 // transport // inferred from electronic annotation /// 0022900 // electron transport chain // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from direct assay","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005739 // mitochondrion // traceable author statement /// 0005759 // mitochondrial matrix // traceable author statement /// 0005759 // mitochondrial matrix // inferred from electronic annotation","0009055 // electron carrier activity // inferred from direct assay /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0009055 // electron carrier activity // traceable author statement /// 0016491 // oxidoreductase activity // inferred from direct assay /// 0050660 // flavin adenine dinucleotide binding // inferred from direct assay /// 0050660 // flavin adenine dinucleotide binding // inferred from electronic annotation","chr15:76508630-76603816 (-) // 94.54 // q24.2"]
["11730303_a_at",-0.0059843063,0.008025646,0.0042185783,-0.066850185,-0.0042185783,0.0294137,0.8503646,0.60528,1.0111322,0.01597169,1.0111322,"up","FANCA",2175.0,"0006281 // DNA repair // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006461 // protein complex assembly // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007140 // male meiosis // inferred from electronic annotation /// 0008584 // male gonad development // inferred from electronic annotation /// 0008585 // female gonad development // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0043240 // Fanconi anaemia nuclear complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr16:89803953-89883066 (-) // 99.02 // q24.3"]
["11728815_a_at",0.013355732,-0.006512642,0.010702133,-0.06883335,-0.015015125,0.006512642,0.62849826,0.24544546,1.0221642,0.031627003,1.0221642,"up","AARS2",57505.0,"0006412 // translation // inferred from electronic annotation /// 0006418 // tRNA aminoacylation for protein translation // traceable author statement /// 0006419 // alanyl-tRNA aminoacylation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0033108 // mitochondrial respiratory chain complex assembly // inferred from mutant phenotype /// 0043039 // tRNA aminoacylation // inferred from electronic annotation /// 0070143 // mitochondrial alanyl-tRNA aminoacylation // inferred from mutant phenotype","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from mutant phenotype /// 0005739 // mitochondrion // inferred from electronic annotation","0000049 // tRNA binding // inferred from electronic annotation /// 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0004812 // aminoacyl-tRNA ligase activity // inferred from electronic annotation /// 0004813 // alanine-tRNA ligase activity // inferred from mutant phenotype /// 0004813 // alanine-tRNA ligase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016876 // ligase activity, forming aminoacyl-tRNA and related compounds // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:44265608-44281063 (-) // 79.85 // p21.1"]
["11738108_at",0.12640285,-0.06587219,0.06587219,0.1999135,-0.09920454,-0.21056223,0.8432671,0.5911312,1.0561041,0.078751996,1.0561041,"up","KCNJ9",3765.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005242 // inward rectifier potassium channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0015467 // G-protein activated inward rectifier potassium channel activity // inferred from electronic annotation","chr1:160051359-160059212 (+) // 85.46 // q23.2"]
["11731058_a_at",-0.114967346,-0.09816694,0.14308691,-0.017327785,0.16574049,0.017327785,0.78734297,0.47790498,-1.0559899,-0.07859598,1.0559899,"down","RASAL1",8437.0,"0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0032320 // positive regulation of Ras GTPase activity // not recorded /// 0032320 // positive regulation of Ras GTPase activity // traceable author statement /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0046580 // negative regulation of Ras protein signal transduction // not recorded /// 0051056 // regulation of small GTPase mediated signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // not recorded /// 0031235 // intrinsic to internal side of plasma membrane // not recorded","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005099 // Ras GTPase activator activity // not recorded /// 0005099 // Ras GTPase activator activity // traceable author statement /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0005543 // phospholipid binding // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:113536623-113574029 (-) // 88.91 // q24.13"]
["11759746_a_at",0.002779007,-0.07545376,-0.002779007,0.012849808,0.01780796,-0.029545307,0.7605416,0.433485,-1.017848,-0.025522154,1.017848,"down","RGNEF",64283.0,"0021955 // central nervous system neuron axonogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0060052 // neurofilament cytoskeleton organization // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr5:73109342-73237013 (+) // 98.84 // q13.2"]
["11730714_s_at",0.008845329,0.019779205,0.0721159,-0.020219803,-0.008846283,-0.059264183,0.39373133,0.06379253,1.0446528,0.06302355,1.0446528,"up","XRCC6",2547.0,"0000723 // telomere maintenance // traceable author statement /// 0006266 // DNA ligation // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006302 // double-strand break repair // traceable author statement /// 0006302 // double-strand break repair // inferred from electronic annotation /// 0006303 // double-strand break repair via nonhomologous end joining // inferred from mutant phenotype /// 0006303 // double-strand break repair via nonhomologous end joining // traceable author statement /// 0006303 // double-strand break repair via nonhomologous end joining // inferred from electronic annotation /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0010212 // response to ionizing radiation // inferred from electronic annotation /// 0016032 // viral reproduction // traceable author statement /// 0019047 // provirus integration // traceable author statement /// 0019059 // initiation of viral infection // traceable author statement /// 0033151 // V(D)J recombination // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0050769 // positive regulation of neurogenesis // inferred from electronic annotation","0000783 // nuclear telomere cap complex // traceable author statement /// 0005624 // membrane fraction // traceable author statement /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from direct assay /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005958 // DNA-dependent protein kinase-DNA ligase 4 complex // inferred from electronic annotation /// 0043564 // Ku70:Ku80 complex // inferred from direct assay /// 0070419 // nonhomologous end joining complex // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // traceable author statement /// 0003691 // double-stranded telomeric DNA binding // inferred from direct assay /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004003 // ATP-dependent DNA helicase activity // inferred from electronic annotation /// 0004003 // ATP-dependent DNA helicase activity // traceable author statement /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0051575 // 5'-deoxyribose-5-phosphate lyase activity // inferred from mutant phenotype","chr22:42017276-42060047 (+) // 89.98 // q13.2"]
["11757769_s_at",0.008573532,-0.002527237,0.009213448,-0.016476631,0.0025281906,-0.03135109,0.50088376,0.1274138,1.0140905,0.020186462,1.0140905,"up","VCL",7414.0,"0002009 // morphogenesis of an epithelium // inferred from mutant phenotype /// 0002576 // platelet degranulation // traceable author statement /// 0006928 // cellular component movement // traceable author statement /// 0006936 // muscle contraction // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007160 // cell-matrix adhesion // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0030032 // lamellipodium assembly // inferred from electronic annotation /// 0030032 // lamellipodium assembly // inferred from sequence or structural similarity /// 0030168 // platelet activation // traceable author statement /// 0030334 // regulation of cell migration // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // traceable author statement /// 0034333 // adherens junction assembly // inferred from mutant phenotype /// 0034394 // protein localization at cell surface // inferred from mutant phenotype /// 0043297 // apical junction assembly // inferred from mutant phenotype /// 0090136 // epithelial cell-cell adhesion // inferred from mutant phenotype","0001725 // stress fiber // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005884 // actin filament // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from sequence or structural similarity /// 0005911 // cell-cell junction // inferred from electronic annotation /// 0005912 // adherens junction // inferred from sequence or structural similarity /// 0005912 // adherens junction // inferred from electronic annotation /// 0005913 // cell-cell adherens junction // inferred from direct assay /// 0005916 // fascia adherens // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0005925 // focal adhesion // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from sequence or structural similarity /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030055 // cell-substrate junction // non-traceable author statement /// 0043034 // costamere // inferred from direct assay /// 0043034 // costamere // inferred from electronic annotation /// 0043034 // costamere // inferred from sequence or structural similarity /// 0043234 // protein complex // inferred from direct assay","0002162 // dystroglycan binding // inferred from physical interaction /// 0003779 // actin binding // inferred from direct assay /// 0005198 // structural molecule activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008013 // beta-catenin binding // inferred from sequence or structural similarity /// 0017048 // Rho GTPase binding // inferred from electronic annotation /// 0045294 // alpha-catenin binding // inferred from physical interaction /// 0045296 // cadherin binding // inferred from sequence or structural similarity","chr10:75879304-75879789 (+) // 91.34 // q22.2"]
["11717422_s_at",-0.017652512,-0.029987335,0.020999908,-0.004395485,0.015050888,0.004395485,0.7660009,0.443359,-1.0096792,-0.013896983,1.0096792,"down","RBM8A",9939.0,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // inferred from mutant phenotype /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // inferred from electronic annotation /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006396 // RNA processing // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // traceable author statement /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0031124 // mRNA 3'-end processing // traceable author statement /// 0051028 // mRNA transport // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016607 // nuclear speck // inferred from electronic annotation /// 0035145 // exon-exon junction complex // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // non-traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0003729 // mRNA binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr1:145507556-145512878 (+) // 83.85 // q21.1"]
["11743355_x_at",-0.040554047,-0.03017807,0.09356117,0.03017807,0.11402607,-0.10724735,0.9863795,0.95449775,-1.0032696,-0.0047092736,1.0032696,"down","MIR4680 /// PDCD4","100616113 /// 27250","0006915 // apoptotic process // non-traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0007569 // cell aging // inferred from direct assay /// 0043508 // negative regulation of JUN kinase activity // inferred from sequence or structural similarity /// 0045786 // negative regulation of cell cycle // non-traceable author statement /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from sequence or structural similarity","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from mutant phenotype /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from mutant phenotype /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay","0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr10:112631595-112659764 (+) // 88.72 // q25.2"]
["11747165_a_at",0.019338131,0.042874813,-0.019338131,-0.041929245,0.03404665,-0.08022356,0.6833594,0.31642467,1.0307256,0.043660305,1.0307256,"up","C9orf174 /// LOC100499484 /// LOC100499484-C9ORF174","100499483 /// 100499484 /// 57653","","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr9:100000730-100054275 (+) // 81.37 // q22.33"]
["11745197_s_at",-0.018247604,-0.01163578,0.06677437,0.01163578,0.08960152,-0.030160904,0.9367426,0.8103833,-1.0079298,-0.011395165,1.0079298,"down","BOLA2 /// LOC100506060 /// LOC100506830 /// LOC440354 /// LOC595101 /// SMG1","100506060 /// 100506830 /// 23049 /// 440354 /// 552900 /// 595101","0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // inferred from direct assay /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // non-traceable author statement /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // inferred from electronic annotation /// 0003333 // amino acid transmembrane transport // inferred from electronic annotation /// 0006281 // DNA repair // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // traceable author statement /// 0006950 // response to stress // inferred from direct assay /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0015807 // L-amino acid transport // inferred from electronic annotation /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from direct assay /// 0018105 // peptidyl-serine phosphorylation // traceable author statement /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0046854 // phosphatidylinositol phosphorylation // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // not recorded /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // non-traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0015171 // amino acid transmembrane transporter activity // inferred from electronic annotation /// 0015179 // L-amino acid transmembrane transporter activity // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0016773 // phosphotransferase activity, alcohol group as acceptor // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:29454574-29465972 (-) // 97.49 // p11.2 /// chr16:29556336-30205314 (-) // 97.41 // p11.2"]
["11717913_at",-0.016664505,0.27610636,-0.16492748,0.016664505,-0.19548655,0.026122808,0.8513469,0.60829204,1.0587813,0.08240457,1.0587813,"up","CDO1",1036.0,"0000096 // sulfur amino acid metabolic process // traceable author statement /// 0000097 // sulfur amino acid biosynthetic process // traceable author statement /// 0000098 // sulfur amino acid catabolic process // traceable author statement /// 0006534 // cysteine metabolic process // traceable author statement /// 0006954 // inflammatory response // traceable author statement /// 0007595 // lactation // inferred from electronic annotation /// 0010243 // response to organic nitrogen // inferred from electronic annotation /// 0019448 // L-cysteine catabolic process // inferred from electronic annotation /// 0033762 // response to glucagon stimulus // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042412 // taurine biosynthetic process // inferred from electronic annotation /// 0042412 // taurine biosynthetic process // traceable author statement /// 0043200 // response to amino acid stimulus // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0045471 // response to ethanol // inferred from electronic annotation /// 0046439 // L-cysteine metabolic process // inferred from electronic annotation /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation /// 0051591 // response to cAMP // inferred from electronic annotation /// 0055114 // oxidation-reduction process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation","0005506 // iron ion binding // inferred from electronic annotation /// 0008198 // ferrous iron binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016702 // oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen // inferred from electronic annotation /// 0017172 // cysteine dioxygenase activity // inferred from sequence or structural similarity /// 0017172 // cysteine dioxygenase activity // traceable author statement /// 0017172 // cysteine dioxygenase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr5:115140429-115152651 (-) // 95.19 // q22.3"]
["11719300_at",-0.06517029,-0.013500214,-0.24422932,0.01350069,0.051834583,0.07338858,0.45773593,0.09963173,-1.1125534,-0.15387453,1.1125534,"down","CTDSP1",58190.0,"0006357 // regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006470 // protein dephosphorylation // inferred from direct assay /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0050768 // negative regulation of neurogenesis // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008420 // CTD phosphatase activity // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:219264477-219270664 (+) // 90.48 // q35"]
["11729250_at",0.16202378,0.041945457,-0.041945457,0.123334646,-0.11899972,-0.09807205,0.7596201,0.43142462,1.0608742,0.08525362,1.0608742,"up","B3GALT2",8707.0,"0006486 // protein glycosylation // inferred from electronic annotation /// 0006486 // protein glycosylation // traceable author statement /// 0009312 // oligosaccharide biosynthetic process // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008378 // galactosyltransferase activity // inferred from electronic annotation /// 0008499 // UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity // inferred from electronic annotation /// 0008499 // UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation","chr1:193147859-193155780 (-) // 97.72 // q31.2"]
["11742452_s_at",-0.049479008,0.074254274,0.049479008,-0.052254677,0.18186927,-0.08404136,0.9755149,0.9222111,1.0066488,0.009560413,1.0066488,"up","MAGED4 /// MAGED4B /// SNORA11D /// SNORA11E","100124541 /// 100124542 /// 728239 /// 81557","","","","chrX:51928007-51935364 (+) // 99.0 // p11.22 /// chrX:51804922-51812279 (-) // 99.0 // p11.22"]
["11716042_x_at",-0.103940964,-0.061234474,0.035542488,0.01257515,0.07415581,-0.01257515,0.61949563,0.235081,-1.0482113,-0.06792962,1.0482113,"down","PPP2CB",5516.0,"0001932 // regulation of protein phosphorylation // inferred from electronic annotation /// 0006470 // protein dephosphorylation // traceable author statement /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0007498 // mesoderm development // inferred from electronic annotation /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0010469 // regulation of receptor activity // inferred from electronic annotation /// 0031952 // regulation of protein autophosphorylation // inferred from electronic annotation /// 0042176 // regulation of protein catabolic process // inferred from electronic annotation /// 0042221 // response to chemical stimulus // inferred from electronic annotation /// 0042542 // response to hydrogen peroxide // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0046580 // negative regulation of Ras protein signal transduction // inferred from electronic annotation /// 0046677 // response to antibiotic // inferred from electronic annotation /// 0070208 // protein heterotrimerization // inferred from electronic annotation","0000159 // protein phosphatase type 2A complex // traceable author statement /// 0000159 // protein phosphatase type 2A complex // inferred from electronic annotation /// 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000922 // spindle pole // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004722 // protein serine/threonine phosphatase activity // traceable author statement /// 0004722 // protein serine/threonine phosphatase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from sequence or structural similarity /// 0046983 // protein dimerization activity // inferred from electronic annotation","chr8:30643129-30670352 (-) // 88.51 // p12"]
["11732836_at",-0.04343915,0.045290947,0.109760046,-0.07404709,-0.14562678,0.04343939,0.62922454,0.24670587,1.068768,0.09594875,1.068768,"up","C4orf6",10141.0,"0007399 // nervous system development // traceable author statement","","","chr4:5526882-5529525 (+) // 46.17 // p16.2"]
["11715515_a_at",0.07726097,-0.024425507,0.009984016,-0.007987976,-0.15753174,0.007987976,0.66489637,0.2920725,1.0522302,0.07345042,1.0522302,"up","PSMD3",5709.0,"0000075 // cell cycle checkpoint // traceable author statement /// 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000084 // S phase of mitotic cell cycle // traceable author statement /// 0000209 // protein polyubiquitination // traceable author statement /// 0000216 // M/G1 transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042176 // regulation of protein catabolic process // inferred from electronic annotation /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0050790 // regulation of catalytic activity // inferred from electronic annotation /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement","0000502 // proteasome complex // inferred from electronic annotation /// 0000502 // proteasome complex // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement","0030234 // enzyme regulator activity // inferred from electronic annotation","chr17:38136891-38154207 (+) // 86.51 // q21.1"]
["11739768_a_at",0.044034004,-0.013795853,-0.02090168,0.0137963295,-0.1568985,0.03137684,0.8288891,0.55944824,1.0283661,0.040353943,1.0283661,"up","PTPRE",5791.0,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0006470 // protein dephosphorylation // traceable author statement /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0007185 // transmembrane receptor protein tyrosine phosphatase signaling pathway // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0033003 // regulation of mast cell activation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation /// 0046627 // negative regulation of insulin receptor signaling pathway // inferred from electronic annotation /// 0046627 // negative regulation of insulin receptor signaling pathway // inferred from sequence or structural similarity","0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0045111 // intermediate filament cytoskeleton // inferred from direct assay","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005001 // transmembrane receptor protein tyrosine phosphatase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation","chr10:129845812-129884162 (+) // 98.65 // q26.2"]
["11727187_a_at",-0.101406574,-0.048475742,-0.120048046,0.10366964,0.048475742,0.12725782,0.14906788,0.0044573997,-1.1353296,-0.18311119,1.1353296,"down","WNT5A",7474.0,"0000187 // activation of MAPK activity // inferred from direct assay /// 0001667 // ameboidal cell migration // inferred from electronic annotation /// 0001736 // establishment of planar polarity // inferred from electronic annotation /// 0001756 // somitogenesis // not recorded /// 0001756 // somitogenesis // inferred from electronic annotation /// 0001837 // epithelial to mesenchymal transition // inferred from expression pattern /// 0001843 // neural tube closure // not recorded /// 0001843 // neural tube closure // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from electronic annotation /// 0001938 // positive regulation of endothelial cell proliferation // inferred from mutant phenotype /// 0001947 // heart looping // not recorded /// 0001947 // heart looping // inferred from electronic annotation /// 0002009 // morphogenesis of an epithelium // inferred from electronic annotation /// 0002053 // positive regulation of mesenchymal cell proliferation // not recorded /// 0002053 // positive regulation of mesenchymal cell proliferation // inferred from electronic annotation /// 0002088 // lens development in camera-type eye // inferred from sequence or structural similarity /// 0002741 // positive regulation of cytokine secretion involved in immune response // inferred from mutant phenotype /// 0003323 // type B pancreatic cell development // not recorded /// 0003323 // type B pancreatic cell development // inferred from electronic annotation /// 0003344 // pericardium morphogenesis // not recorded /// 0003344 // pericardium morphogenesis // inferred from electronic annotation /// 0003401 // axis elongation // inferred from electronic annotation /// 0003408 // optic cup formation involved in camera-type eye development // inferred from sequence or structural similarity /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007165 // signal transduction // inferred by curator /// 0007223 // Wnt receptor signaling pathway, calcium modulating pathway // inferred from direct assay /// 0007223 // Wnt receptor signaling pathway, calcium modulating pathway // inferred from mutant phenotype /// 0007223 // Wnt receptor signaling pathway, calcium modulating pathway // inferred from electronic annotation /// 0007254 // JNK cascade // inferred from electronic annotation /// 0007257 // activation of JUN kinase activity // inferred from direct assay /// 0007257 // activation of JUN kinase activity // inferred from mutant phenotype /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007411 // axon guidance // inferred from sequence or structural similarity /// 0007411 // axon guidance // inferred from electronic annotation /// 0007442 // hindgut morphogenesis // inferred from electronic annotation /// 0007494 // midgut development // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008584 // male gonad development // inferred from expression pattern /// 0008584 // male gonad development // inferred from electronic annotation /// 0008595 // anterior/posterior axis specification, embryo // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0009950 // dorsal/ventral axis specification // not recorded /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from expression pattern /// 0010033 // response to organic substance // inferred from electronic annotation /// 0010595 // positive regulation of endothelial cell migration // inferred from mutant phenotype /// 0010820 // positive regulation of T cell chemotaxis // inferred from mutant phenotype /// 0010976 // positive regulation of neuron projection development // inferred from sequence or structural similarity /// 0010976 // positive regulation of neuron projection development // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0016055 // Wnt receptor signaling pathway // inferred from direct assay /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0016477 // cell migration // inferred from electronic annotation /// 0021891 // olfactory bulb interneuron development // inferred from sequence or structural similarity /// 0021891 // olfactory bulb interneuron development // inferred from electronic annotation /// 0021915 // neural tube development // inferred from electronic annotation /// 0022409 // positive regulation of cell-cell adhesion // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from sequence or structural similarity /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0030216 // keratinocyte differentiation // inferred from expression pattern /// 0030324 // lung development // inferred from electronic annotation /// 0030326 // embryonic limb morphogenesis // inferred from electronic annotation /// 0030514 // negative regulation of BMP signaling pathway // not recorded /// 0030514 // negative regulation of BMP signaling pathway // inferred from electronic annotation /// 0030825 // positive regulation of cGMP metabolic process // inferred from direct assay /// 0030850 // prostate gland development // inferred from electronic annotation /// 0032148 // activation of protein kinase B activity // inferred from direct assay /// 0032355 // response to estradiol stimulus // inferred from electronic annotation /// 0032729 // positive regulation of interferon-gamma production // inferred from electronic annotation /// 0032755 // positive regulation of interleukin-6 production // inferred from mutant phenotype /// 0032755 // positive regulation of interleukin-6 production // inferred from electronic annotation /// 0033574 // response to testosterone stimulus // inferred from electronic annotation /// 0034613 // cellular protein localization // inferred from direct assay /// 0034613 // cellular protein localization // inferred from electronic annotation /// 0035108 // limb morphogenesis // inferred from electronic annotation /// 0035121 // tail morphogenesis // not recorded /// 0035121 // tail morphogenesis // inferred from electronic annotation /// 0040037 // negative regulation of fibroblast growth factor receptor signaling pathway // not recorded /// 0040037 // negative regulation of fibroblast growth factor receptor signaling pathway // inferred from electronic annotation /// 0042060 // wound healing // inferred from direct assay /// 0042472 // inner ear morphogenesis // inferred from electronic annotation /// 0042733 // embryonic digit morphogenesis // not recorded /// 0042733 // embryonic digit morphogenesis // inferred from electronic annotation /// 0043032 // positive regulation of macrophage activation // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043507 // positive regulation of JUN kinase activity // inferred from electronic annotation /// 0045080 // positive regulation of chemokine biosynthetic process // inferred from mutant phenotype /// 0045599 // negative regulation of fat cell differentiation // inferred from mutant phenotype /// 0045732 // positive regulation of protein catabolic process // inferred from genetic interaction /// 0045766 // positive regulation of angiogenesis // inferred from mutant phenotype /// 0045778 // positive regulation of ossification // inferred from mutant phenotype /// 0045836 // positive regulation of meiosis // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0046330 // positive regulation of JNK cascade // not recorded /// 0046330 // positive regulation of JNK cascade // inferred from electronic annotation /// 0046546 // development of primary male sexual characteristics // inferred from electronic annotation /// 0048146 // positive regulation of fibroblast proliferation // inferred from direct assay /// 0048286 // lung alveolus development // inferred from electronic annotation /// 0048546 // digestive tract morphogenesis // not recorded /// 0048546 // digestive tract morphogenesis // inferred from electronic annotation /// 0048706 // embryonic skeletal system development // inferred from mutant phenotype /// 0048806 // genitalia development // inferred from mutant phenotype /// 0048812 // neuron projection morphogenesis // inferred from electronic annotation /// 0048843 // negative regulation of axon extension involved in axon guidance // inferred from electronic annotation /// 0048850 // hypophysis morphogenesis // inferred from electronic annotation /// 0050679 // positive regulation of epithelial cell proliferation // inferred from electronic annotation /// 0050680 // negative regulation of epithelial cell proliferation // inferred from electronic annotation /// 0050718 // positive regulation of interleukin-1 beta secretion // inferred from mutant phenotype /// 0050718 // positive regulation of interleukin-1 beta secretion // inferred from electronic annotation /// 0050729 // positive regulation of inflammatory response // inferred from mutant phenotype /// 0050919 // negative chemotaxis // inferred from electronic annotation /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0051216 // cartilage development // inferred from electronic annotation /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation /// 0051964 // negative regulation of synapse assembly // inferred from electronic annotation /// 0055093 // response to hyperoxia // inferred from electronic annotation /// 0060021 // palate development // inferred from mutant phenotype /// 0060026 // convergent extension // inferred from electronic annotation /// 0060029 // convergent extension involved in organogenesis // not recorded /// 0060029 // convergent extension involved in organogenesis // inferred from electronic annotation /// 0060065 // uterus development // not recorded /// 0060065 // uterus development // inferred from electronic annotation /// 0060067 // cervix development // not recorded /// 0060067 // cervix development // inferred from electronic annotation /// 0060068 // vagina development // not recorded /// 0060068 // vagina development // inferred from electronic annotation /// 0060070 // canonical Wnt receptor signaling pathway // inferred from electronic annotation /// 0060071 // Wnt receptor signaling pathway, planar cell polarity pathway // not recorded /// 0060071 // Wnt receptor signaling pathway, planar cell polarity pathway // inferred from electronic annotation /// 0060157 // urinary bladder development // not recorded /// 0060157 // urinary bladder development // inferred from electronic annotation /// 0060210 // metestrus // inferred from electronic annotation /// 0060324 // face development // inferred from mutant phenotype /// 0060340 // positive regulation of type I interferon-mediated signaling pathway // inferred from direct assay /// 0060541 // respiratory system development // not recorded /// 0060599 // lateral sprouting involved in mammary gland duct morphogenesis // not recorded /// 0060599 // lateral sprouting involved in mammary gland duct morphogenesis // inferred from electronic annotation /// 0060606 // tube closure // inferred from electronic annotation /// 0060638 // mesenchymal-epithelial cell signaling // inferred from electronic annotation /// 0060686 // negative regulation of prostatic bud formation // inferred from electronic annotation /// 0060744 // mammary gland branching involved in thelarche // not recorded /// 0060744 // mammary gland branching involved in thelarche // inferred from electronic annotation /// 0060750 // epithelial cell proliferation involved in mammary gland duct elongation // not recorded /// 0060750 // epithelial cell proliferation involved in mammary gland duct elongation // inferred from electronic annotation /// 0060760 // positive regulation of response to cytokine stimulus // inferred from direct assay /// 0060762 // regulation of branching involved in mammary gland duct morphogenesis // not recorded /// 0060762 // regulation of branching involved in mammary gland duct morphogenesis // inferred from electronic annotation /// 0060907 // positive regulation of macrophage cytokine production // inferred from mutant phenotype /// 0061036 // positive regulation of cartilage development // not recorded /// 0061036 // positive regulation of cartilage development // inferred from electronic annotation /// 0061347 // planar cell polarity pathway involved in outflow tract morphogenesis // inferred from electronic annotation /// 0061348 // planar cell polarity pathway involved in ventricular septum morphogenesis // inferred from electronic annotation /// 0061349 // planar cell polarity pathway involved in cardiac right atrium morphogenesis // inferred from electronic annotation /// 0061350 // planar cell polarity pathway involved in cardiac muscle tissue morphogenesis // inferred from electronic annotation /// 0061354 // planar cell polarity pathway involved in pericardium morphogenesis // inferred from electronic annotation /// 0070245 // positive regulation of thymocyte apoptotic process // not recorded /// 0070245 // positive regulation of thymocyte apoptotic process // inferred from electronic annotation /// 0071219 // cellular response to molecule of bacterial origin // inferred from electronic annotation /// 0071222 // cellular response to lipopolysaccharide // inferred from expression pattern /// 0071277 // cellular response to calcium ion // inferred from expression pattern /// 0071300 // cellular response to retinoic acid // inferred from sequence or structural similarity /// 0071346 // cellular response to interferon-gamma // inferred from expression pattern /// 0071425 // hemopoietic stem cell proliferation // inferred from direct assay /// 0071425 // hemopoietic stem cell proliferation // inferred from electronic annotation /// 0071542 // dopaminergic neuron differentiation // not recorded /// 0071542 // dopaminergic neuron differentiation // inferred from electronic annotation /// 0071560 // cellular response to transforming growth factor beta stimulus // inferred from expression pattern /// 0072201 // negative regulation of mesenchymal cell proliferation // inferred from direct assay /// 0090009 // primitive streak formation // not recorded /// 0090009 // primitive streak formation // inferred from electronic annotation /// 0090037 // positive regulation of protein kinase C signaling cascade // inferred from mutant phenotype /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from direct assay /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from genetic interaction /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from electronic annotation /// 0090103 // cochlea morphogenesis // not recorded /// 0090103 // cochlea morphogenesis // inferred from electronic annotation /// 0090179 // planar cell polarity pathway involved in neural tube closure // inferred from electronic annotation /// 2000049 // positive regulation of cell-cell adhesion mediated by cadherin // inferred from electronic annotation /// 2000484 // positive regulation of interleukin-8 secretion // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // not recorded /// 0009986 // cell surface // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from electronic annotation","0003700 // sequence-specific DNA binding transcription factor activity // inferred from mutant phenotype /// 0005102 // receptor binding // inferred from electronic annotation /// 0005109 // frizzled binding // inferred from physical interaction /// 0005109 // frizzled binding // inferred from electronic annotation /// 0005110 // frizzled-2 binding // not recorded /// 0005110 // frizzled-2 binding // inferred from electronic annotation /// 0005115 // receptor tyrosine kinase-like orphan receptor binding // inferred from physical interaction /// 0005125 // cytokine activity // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0048018 // receptor agonist activity // inferred by curator","chr3:55499742-55521670 (-) // 96.72 // p14.3"]
["11734458_a_at",-0.013217449,0.051232815,-0.25565004,-0.015873432,0.013217449,0.10735798,0.7040139,0.34547436,-1.077319,-0.10744554,1.077319,"down","FAM160B1",57700.0,"","","","chr10:116581502-116659608 (+) // 84.92 // q25.3"]
["11742840_x_at",-0.018879414,0.022710323,0.018879414,0.029816628,-0.17984486,-0.08428955,0.622753,0.2394172,1.0611849,0.08567603,1.0611849,"up","HSD17B1",3292.0,"0006694 // steroid biosynthetic process // traceable author statement /// 0006694 // steroid biosynthetic process // inferred from electronic annotation /// 0006703 // estrogen biosynthetic process // inferred from electronic annotation /// 0006703 // estrogen biosynthetic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008202 // steroid metabolic process // traceable author statement /// 0008210 // estrogen metabolic process // traceable author statement /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // traceable author statement /// 0004303 // estradiol 17-beta-dehydrogenase activity // traceable author statement /// 0004303 // estradiol 17-beta-dehydrogenase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation","chr17:40701499-40707232 (+) // 48.45 // q21.2"]
["11722315_a_at",0.014601707,-0.026120186,0.01497364,-0.014601707,0.03197193,-0.103867054,0.8067732,0.51588076,1.0210007,0.029983915,1.0210007,"up","PLAC1",10761.0,"0001890 // placenta development // inferred from expression pattern /// 0001890 // placenta development // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","","chrX:133699872-133792515 (-) // 94.08 // q26.3"]
["11747868_x_at",0.0576334,0.0115356445,0.11163902,-0.0115356445,-0.07672119,-0.04206562,0.3324594,0.039757855,1.0745333,0.10371025,1.0745333,"up","SDHA",6389.0,"0006099 // tricarboxylic acid cycle // inferred from electronic annotation /// 0006099 // tricarboxylic acid cycle // traceable author statement /// 0006105 // succinate metabolic process // inferred from direct assay /// 0006105 // succinate metabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0007399 // nervous system development // inferred from mutant phenotype /// 0022900 // electron transport chain // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // inferred from direct assay /// 0022904 // respiratory electron transport chain // traceable author statement /// 0022904 // respiratory electron transport chain // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from sequence or structural similarity /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005749 // mitochondrial respiratory chain complex II // inferred from sequence or structural similarity /// 0005749 // mitochondrial respiratory chain complex II // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0000104 // succinate dehydrogenase activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0008177 // succinate dehydrogenase (ubiquinone) activity // inferred from electronic annotation /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016627 // oxidoreductase activity, acting on the CH-CH group of donors // inferred from electronic annotation /// 0050660 // flavin adenine dinucleotide binding // inferred from electronic annotation","chr5:218432-256794 (+) // 99.86 // p15.33"]
["11718034_a_at",-0.1427393,0.0045912266,0.1592853,0.08563924,-0.13421369,-0.0045912266,0.94386095,0.8299336,1.0173159,0.024767688,1.0173159,"up","APOA2",336.0,"0002526 // acute inflammatory response // inferred from electronic annotation /// 0002740 // negative regulation of cytokine secretion involved in immune response // inferred from direct assay /// 0006457 // protein folding // inferred from direct assay /// 0006629 // lipid metabolic process // traceable author statement /// 0006641 // triglyceride metabolic process // traceable author statement /// 0006656 // phosphatidylcholine biosynthetic process // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // inferred from electronic annotation /// 0009395 // phospholipid catabolic process // inferred from direct assay /// 0009749 // response to glucose stimulus // inferred from direct assay /// 0010873 // positive regulation of cholesterol esterification // inferred from direct assay /// 0010903 // negative regulation of very-low-density lipoprotein particle remodeling // inferred from direct assay /// 0018158 // protein oxidation // inferred from direct assay /// 0018206 // peptidyl-methionine modification // inferred from direct assay /// 0030300 // regulation of intestinal cholesterol absorption // inferred from electronic annotation /// 0030301 // cholesterol transport // inferred from electronic annotation /// 0031100 // organ regeneration // inferred from electronic annotation /// 0031647 // regulation of protein stability // inferred from direct assay /// 0032375 // negative regulation of cholesterol transport // inferred from mutant phenotype /// 0033344 // cholesterol efflux // inferred from direct assay /// 0033700 // phospholipid efflux // inferred from direct assay /// 0034370 // triglyceride-rich lipoprotein particle remodeling // inferred from direct assay /// 0034374 // low-density lipoprotein particle remodeling // inferred from direct assay /// 0034375 // high-density lipoprotein particle remodeling // inferred from direct assay /// 0034380 // high-density lipoprotein particle assembly // inferred from direct assay /// 0034384 // high-density lipoprotein particle clearance // inferred from direct assay /// 0042157 // lipoprotein metabolic process // traceable author statement /// 0042157 // lipoprotein metabolic process // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042632 // cholesterol homeostasis // inferred from direct assay /// 0042632 // cholesterol homeostasis // inferred from electronic annotation /// 0043627 // response to estrogen stimulus // inferred from electronic annotation /// 0043691 // reverse cholesterol transport // inferred from direct assay /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045416 // positive regulation of interleukin-8 biosynthetic process // inferred from direct assay /// 0046340 // diacylglycerol catabolic process // inferred from direct assay /// 0050995 // negative regulation of lipid catabolic process // inferred from direct assay /// 0050996 // positive regulation of lipid catabolic process // inferred from direct assay /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation /// 0060192 // negative regulation of lipase activity // inferred from direct assay /// 0060192 // negative regulation of lipase activity // inferred from electronic annotation /// 0060621 // negative regulation of cholesterol import // inferred from direct assay /// 0060695 // negative regulation of cholesterol transporter activity // inferred from direct assay","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0034361 // very-low-density lipoprotein particle // inferred from direct assay /// 0034364 // high-density lipoprotein particle // inferred from direct assay /// 0034364 // high-density lipoprotein particle // inferred from electronic annotation /// 0034366 // spherical high-density lipoprotein particle // inferred from direct assay /// 0042627 // chylomicron // inferred from direct assay","0005319 // lipid transporter activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from direct assay /// 0008035 // high-density lipoprotein particle binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from direct assay /// 0008289 // lipid binding // inferred from electronic annotation /// 0015485 // cholesterol binding // inferred from direct assay /// 0017127 // cholesterol transporter activity // inferred from direct assay /// 0017127 // cholesterol transporter activity // inferred from electronic annotation /// 0031210 // phosphatidylcholine binding // inferred from direct assay /// 0034190 // apolipoprotein receptor binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from physical interaction /// 0055102 // lipase inhibitor activity // inferred from direct assay /// 0060228 // phosphatidylcholine-sterol O-acyltransferase activator activity // inferred from direct assay /// 0070653 // high-density lipoprotein particle receptor binding // inferred from physical interaction","chr1:161192081-161193418 (-) // 83.45 // q23.3"]
["11755123_x_at",0.04316044,0.03871727,0.09952259,-0.07726288,-0.03871727,-0.07137108,0.1643393,0.0058623324,1.0889345,0.12291723,1.0889345,"up","LPCAT3",10162.0,"0006644 // phospholipid metabolic process // inferred from electronic annotation /// 0008654 // phospholipid biosynthetic process // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0016747 // transferase activity, transferring acyl groups other than amino-acyl groups // inferred from electronic annotation /// 0047184 // 1-acylglycerophosphocholine O-acyltransferase activity // inferred from electronic annotation","chr12:7085347-7125781 (-) // 85.87 // p13.31"]
["11763334_at",0.028329372,-0.18699121,-0.22946024,0.043892384,0.07570505,-0.028329134,0.5108346,0.13509041,-1.1171298,-0.15979682,1.1171298,"down","RIN1",9610.0,"0006897 // endocytosis // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr11:66097712-66103479 (-) // 88.77 // q13.2"]
["11721972_at",0.042951584,0.11982155,0.045324326,-0.04462719,-0.042951584,-0.122540474,0.25110584,0.018650178,1.1014512,0.13940552,1.1014512,"up","PHF16",9767.0,"0043966 // histone H3 acetylation // inferred from direct assay /// 0043981 // histone H4-K5 acetylation // inferred from direct assay /// 0043982 // histone H4-K8 acetylation // inferred from direct assay /// 0043983 // histone H4-K12 acetylation // inferred from direct assay /// 0043984 // histone H4-K16 acetylation // inferred from direct assay","0000123 // histone acetyltransferase complex // inferred from direct assay","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chrX:46771867-46920641 (+) // 95.25 // p11.23"]
["11716898_at",-0.01049304,0.13450956,-0.07912803,-0.016940832,0.08696103,0.01049304,0.9591345,0.8739299,-1.008265,-0.011874896,1.008265,"down","ARL3",403.0,"0000910 // cytokinesis // inferred from mutant phenotype /// 0001822 // kidney development // inferred from sequence or structural similarity /// 0001822 // kidney development // inferred from electronic annotation /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from direct assay /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0042461 // photoreceptor cell development // inferred from sequence or structural similarity /// 0042461 // photoreceptor cell development // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 0060271 // cilium morphogenesis // inferred from mutant phenotype","0000139 // Golgi membrane // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005876 // spindle microtubule // inferred from direct assay /// 0005881 // cytoplasmic microtubule // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005929 // cilium // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030496 // midbody // inferred from direct assay /// 0032391 // photoreceptor connecting cilium // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation /// 0072372 // primary cilium // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from direct assay /// 0005525 // GTP binding // inferred from electronic annotation /// 0005525 // GTP binding // traceable author statement /// 0008017 // microtubule binding // inferred from direct assay /// 0019003 // GDP binding // inferred from direct assay /// 0019003 // GDP binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr10:104433483-104474196 (-) // 96.42 // q24.32"]
["11716958_a_at",0.043180466,-0.041484833,-0.06480408,0.06550789,-0.025043488,0.025043488,0.71649384,0.36485055,-1.0301626,-0.04287203,1.0301626,"down","AAAS",8086.0,"0005975 // carbohydrate metabolic process // traceable author statement /// 0006913 // nucleocytoplasmic transport // inferred from direct assay /// 0007612 // learning // inferred from electronic annotation /// 0008645 // hexose transport // traceable author statement /// 0009566 // fertilization // inferred from electronic annotation /// 0010827 // regulation of glucose transport // traceable author statement /// 0015758 // glucose transport // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046822 // regulation of nucleocytoplasmic transport // non-traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005635 // nuclear envelope // traceable author statement /// 0005643 // nuclear pore // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0031965 // nuclear membrane // inferred from direct assay","","chr12:53701239-53715415 (-) // 97.87 // q13.13"]
["11731670_a_at",-0.041923523,0.08017206,-0.04424429,0.07468438,-0.007138729,0.007138729,0.8510612,0.6067733,-1.0188159,-0.026893344,1.0188159,"down","PCDHB6",56130.0,"0007155 // cell adhesion // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007399 // nervous system development // traceable author statement /// 0007416 // synapse assembly // traceable author statement /// 0016339 // calcium-dependent cell-cell adhesion // non-traceable author statement","0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr5:140529428-140532868 (+) // 97.86 // q31.3"]
["11758231_x_at",-0.02290535,0.19919777,-0.02017641,-0.1900773,0.24618435,0.02017641,0.95558506,0.86413085,1.0186164,0.026610903,1.0186164,"up","HLA-DPA1",3113.0,"0002504 // antigen processing and presentation of peptide or polysaccharide antigen via MHC class II // inferred from electronic annotation /// 0006955 // immune response // non-traceable author statement /// 0006955 // immune response // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0019882 // antigen processing and presentation // inferred from electronic annotation /// 0031295 // T cell costimulation // traceable author statement /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0071346 // cellular response to interferon-gamma // inferred from direct assay","0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0042613 // MHC class II protein complex // inferred from electronic annotation","0032395 // MHC class II receptor activity // non-traceable author statement","chr6:33032792-33036549 (-) // 85.88 // p21.32"]
["11733747_at",-0.07740784,-0.09253979,0.03401375,0.08728123,-0.02662611,0.02662611,0.6094773,0.22365391,-1.0529267,-0.07440495,1.0529267,"down","MCHR2",84539.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation","chr6:100367785-100442100 (-) // 89.15 // q16.2"]
["11728339_at",-0.005823612,-0.11040306,0.08751011,0.11775637,-0.038835526,0.005823612,0.8631096,0.63503087,-1.0265617,-0.03782039,1.0265617,"down","CENPBD1",92806.0,"","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation","chr16:90036198-90039215 (-) // 58.25 // q24.3"]
["11755350_a_at",-0.0039196014,0.07473469,0.0039196014,0.028487206,-0.1264844,-0.053666115,0.6025787,0.21507655,1.0537013,0.075465925,1.0537013,"up","XIRP1",165904.0,"0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0042391 // regulation of membrane potential // inferred from electronic annotation /// 0045214 // sarcomere organization // inferred from electronic annotation /// 0055013 // cardiac muscle cell development // inferred from electronic annotation","0005886 // plasma membrane // inferred from direct assay /// 0005913 // cell-cell adherens junction // inferred from electronic annotation /// 0005916 // fascia adherens // inferred from electronic annotation /// 0014704 // intercalated disc // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation","chr3:39224705-39234087 (-) // 98.03 // p22.2"]
["11753728_x_at",0.031279564,0.024413109,-0.024851799,-0.043422222,-0.024413109,0.05622673,0.8958094,0.7089581,1.0098562,0.014149907,1.0098562,"up","MED25",81857.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0035563 // positive regulation of chromatin binding // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0048147 // negative regulation of fibroblast proliferation // inferred from mutant phenotype /// 0071158 // positive regulation of cell cycle arrest // inferred from mutant phenotype /// 2001178 // positive regulation of mediator complex assembly // inferred from mutant phenotype","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0042974 // retinoic acid receptor binding // inferred from physical interaction /// 0042974 // retinoic acid receptor binding // inferred from electronic annotation /// 0046965 // retinoid X receptor binding // inferred from physical interaction /// 0046965 // retinoid X receptor binding // inferred from electronic annotation","chr19:50321598-50340219 (+) // 100.0 // q13.33"]
["11729823_s_at",-0.025008678,0.032939434,-0.025786877,0.07068539,-0.09902573,0.025008678,0.97951907,0.93324375,-1.0033615,-0.0048414343,1.0033615,"down","WDR85",92715.0,"0017183 // peptidyl-diphthamide biosynthetic process from peptidyl-histidine // inferred from mutant phenotype","","","chr9:140449360-140473387 (-) // 97.17 // q34.3"]
["11747765_a_at",0.043632507,0.0892477,0.18557453,-0.043632507,-0.10588837,-0.048885345,0.26061052,0.02051807,1.1268433,0.17228694,1.1268433,"up","PPP2R5A",5525.0,"0007165 // signal transduction // inferred from electronic annotation /// 0035307 // positive regulation of protein dephosphorylation // inferred from mutant phenotype /// 0090005 // negative regulation of establishment of protein localization in plasma membrane // inferred from mutant phenotype /// 0090219 // negative regulation of lipid kinase activity // inferred from mutant phenotype","0000159 // protein phosphatase type 2A complex // inferred from direct assay /// 0000159 // protein phosphatase type 2A complex // inferred from electronic annotation /// 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0031430 // M band // inferred from sequence or structural similarity","0005515 // protein binding // inferred from physical interaction /// 0008601 // protein phosphatase type 2A regulator activity // inferred from electronic annotation /// 0008601 // protein phosphatase type 2A regulator activity // traceable author statement /// 0019900 // kinase binding // inferred from physical interaction","chr1:212475147-212534482 (+) // 99.73 // q32.3"]
["11716916_a_at",-0.15262079,-0.008097172,-0.07664728,0.038917065,0.008097172,0.09619284,0.38764152,0.06100465,-1.0919126,-0.12685741,1.0919126,"down","PGAP3",93210.0,"0006505 // GPI anchor metabolic process // inferred from mutant phenotype /// 0006506 // GPI anchor biosynthetic process // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031227 // intrinsic to endoplasmic reticulum membrane // inferred from direct assay","0016788 // hydrolase activity, acting on ester bonds // inferred from mutant phenotype","chr17:37827374-37844310 (-) // 95.9 // q12"]
["11752382_a_at",-0.08667922,0.07294631,-0.15991235,0.07406235,-0.05496502,0.05496502,0.71270883,0.35839608,-1.0589021,-0.08256927,1.0589021,"down","S1PR1",1901.0,"0001525 // angiogenesis // inferred from electronic annotation /// 0003376 // sphingosine-1-phosphate signaling pathway // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007193 // adenylate cyclase-inhibiting G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0019226 // transmission of nerve impulse // inferred from electronic annotation /// 0030155 // regulation of cell adhesion // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0032320 // positive regulation of Ras GTPase activity // inferred from electronic annotation /// 0045446 // endothelial cell differentiation // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from electronic annotation /// 0050927 // positive regulation of positive chemotaxis // inferred from electronic annotation /// 0051482 // elevation of cytosolic calcium ion concentration involved in phospholipase C-activating G-protein coupled signaling pathway // inferred from electronic annotation /// 0051497 // negative regulation of stress fiber assembly // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0038036 // sphingosine-1-phosphate receptor activity // inferred from electronic annotation /// 0046625 // sphingolipid binding // inferred from electronic annotation","chr1:101702458-101706505 (+) // 99.86 // p21.2"]
["11740635_a_at",0.2054491,-0.15870667,-0.06795502,0.22197819,-0.08718586,0.06795502,0.85896516,0.62503064,-1.053108,-0.074653365,1.053108,"down","C19orf57",79173.0,"0007275 // multicellular organismal development // non-traceable author statement","","0005515 // protein binding // inferred from physical interaction","chr19:13993165-14016978 (-) // 99.72 // p13.13"]
["11727471_a_at",0.006011486,-0.037258863,-0.04053116,0.0830822,-0.0060117245,0.057135105,0.43653503,0.08689893,-1.0487431,-0.068661354,1.0487431,"down","CYP2C9",1559.0,"0006805 // xenobiotic metabolic process // traceable author statement /// 0008202 // steroid metabolic process // inferred from mutant phenotype /// 0016098 // monoterpenoid metabolic process // inferred from direct assay /// 0017144 // drug metabolic process // inferred from direct assay /// 0017144 // drug metabolic process // inferred from mutant phenotype /// 0019627 // urea metabolic process // inferred from direct assay /// 0032787 // monocarboxylic acid metabolic process // inferred from direct assay /// 0042737 // drug catabolic process // inferred from mutant phenotype /// 0042738 // exogenous drug catabolic process // inferred from direct assay /// 0043603 // cellular amide metabolic process // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0070989 // oxidative demethylation // inferred from direct assay","0005783 // endoplasmic reticulum // non-traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from direct assay /// 0005792 // microsome // traceable author statement /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0004497 // monooxygenase activity // inferred from direct assay /// 0004497 // monooxygenase activity // non-traceable author statement /// 0004497 // monooxygenase activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from electronic annotation /// 0008144 // drug binding // inferred from direct assay /// 0008395 // steroid hydroxylase activity // inferred from mutant phenotype /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from direct assay /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016705 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen // inferred from electronic annotation /// 0018675 // (S)-limonene 6-monooxygenase activity // inferred from electronic annotation /// 0018676 // (S)-limonene 7-monooxygenase activity // inferred from electronic annotation /// 0020037 // heme binding // inferred from electronic annotation /// 0034875 // caffeine oxidase activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0052741 // (R)-limonene 6-monooxygenase activity // inferred from electronic annotation","chr10:96698344-96749662 (+) // 90.41 // q23.33"]
["11736798_a_at",-0.078694105,0.10342789,-0.107943535,0.1337657,-0.12475729,0.078694105,0.8516501,0.6087349,-1.0402792,-0.056970716,1.0402792,"down","RUNX1T1",862.0,"0006091 // generation of precursor metabolites and energy // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045444 // fat cell differentiation // inferred from electronic annotation /// 0051101 // regulation of DNA binding // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0016363 // nuclear matrix // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:92971151-93107731 (-) // 94.86 // q21.3"]
["11740594_s_at",0.016422749,-0.06691027,-0.01642251,0.078015566,0.3446238,-0.057177544,0.66902924,0.29773536,-1.1050594,-0.1441239,1.1050594,"down","HIST1H3A /// HIST1H3B /// HIST1H3C /// HIST1H3D /// HIST1H3E /// HIST1H3F /// HIST1H3G /// HIST1H3H /// HIST1H3I /// HIST1H3J","8350 /// 8351 /// 8352 /// 8353 /// 8354 /// 8355 /// 8356 /// 8357 /// 8358 /// 8968","0006334 // nucleosome assembly // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0051320 // S phase // non-traceable author statement /// 0060968 // regulation of gene silencing // inferred from direct assay","0000786 // nucleosome // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr6:26225382-26226385 (+) // 98.9 // p22.2"]
["11742499_at",0.0027422905,0.057139874,-0.11717892,-0.05378008,0.16858482,-0.0027422905,0.8196787,0.5415587,-1.0399059,-0.056452993,1.0399059,"down","ARID3C",138715.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0045121 // membrane raft // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation","chr9:34621454-34628011 (-) // 93.95 // p13.3"]
["11735852_s_at",-0.047178745,0.07831097,-0.1878767,-0.31058884,0.066642284,0.047178745,0.97880685,0.93099105,1.0092902,0.013341077,1.0092902,"up","OR10H1 /// OR10H5","26539 /// 284433","0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr19:15917812-15918936 (-) // 98.49 // p13.12"]
["11732606_at",0.03927517,0.15541983,-0.040591,0.20060563,-0.03927517,-0.09047055,0.93581575,0.8068539,1.0194197,0.027748095,1.0194197,"up","CBLN4",140689.0,"0009306 // protein secretion // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","","chr20:54572259-54580565 (-) // 95.57 // q13.2"]
["11744945_a_at",-0.048472643,-0.093378305,0.17170882,-0.023049593,0.13968587,0.023049831,0.90055394,0.720014,-1.0257004,-0.03660946,1.0257004,"down","NLGN4Y",22829.0,"0007155 // cell adhesion // inferred from electronic annotation /// 0007416 // synapse assembly // not recorded","0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // not recorded /// 0009986 // cell surface // not recorded /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0045202 // synapse // not recorded /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0004091 // carboxylesterase activity // not recorded /// 0004872 // receptor activity // not recorded /// 0005515 // protein binding // inferred from physical interaction /// 0042043 // neurexin family protein binding // not recorded","chrY:16734097-16845419 (+) // 80.05 // q11.221"]
["11758797_s_at",-0.013655663,0.010377884,0.0071430206,-0.0071430206,-0.008023262,0.06648445,0.83481795,0.5731528,-1.0110242,-0.015817583,1.0110242,"down","SRSF10",10772.0,"0000244 // assembly of spliceosomal tri-snRNP // non-traceable author statement /// 0000375 // RNA splicing, via transesterification reactions // inferred from direct assay /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006376 // mRNA splice site selection // inferred from direct assay /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // non-traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0016482 // cytoplasmic transport // inferred from direct assay /// 0048025 // negative regulation of nuclear mRNA splicing, via spliceosome // inferred from direct assay","0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // non-traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0050733 // RS domain binding // non-traceable author statement /// 0051082 // unfolded protein binding // non-traceable author statement","chr1:24290836-24306885 (-) // 85.86 // p36.11 /// chr1_gl000191_random:34172-50213 (-) // 85.84 //"]
["11745321_a_at",-0.00202322,-0.16401768,-0.023467064,0.027397633,0.1491952,0.00202322,0.526459,0.14613439,-1.0887766,-0.12270795,1.0887766,"down","ZFP28",140612.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:57050321-57064503 (+) // 77.19 // q13.43"]
["11743459_x_at",0.003569603,-0.0027179718,0.0027179718,0.01214695,-0.10311985,-0.074518204,0.564761,0.17978565,1.0398343,0.056353595,1.0398343,"up","HDLBP",3069.0,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // inferred from electronic annotation /// 0008202 // steroid metabolic process // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0034364 // high-density lipoprotein particle // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0008289 // lipid binding // traceable author statement","chr2:242166701-242255254 (-) // 99.46 // q37.3"]
["11725784_a_at",-0.03906727,-0.07297611,-0.06837654,0.03906727,0.052001,0.039622307,0.08460619,8.175315E-4,-1.0745283,-0.10370353,1.0745283,"down","ERI2",112479.0,"0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004527 // exonuclease activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:20807661-20817780 (-) // 89.47 // p12.3"]
["11753209_a_at",-0.044708252,0.05449581,-0.024656773,0.024656296,-0.039803505,0.04591179,0.90100557,0.72152615,-1.0105994,-0.015211192,1.0105994,"down","HYAL1",3373.0,"0000302 // response to reactive oxygen species // inferred from direct assay /// 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0009615 // response to virus // inferred from direct assay /// 0009615 // response to virus // inferred from electronic annotation /// 0010634 // positive regulation of epithelial cell migration // inferred from direct assay /// 0030212 // hyaluronan metabolic process // inferred from direct assay /// 0030213 // hyaluronan biosynthetic process // inferred from direct assay /// 0030214 // hyaluronan catabolic process // inferred from direct assay /// 0030214 // hyaluronan catabolic process // inferred from electronic annotation /// 0030307 // positive regulation of cell growth // inferred from mutant phenotype /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0036120 // cellular response to platelet-derived growth factor stimulus // inferred from direct assay /// 0044344 // cellular response to fibroblast growth factor stimulus // inferred from direct assay /// 0045750 // positive regulation of S phase of mitotic cell cycle // inferred from direct assay /// 0045766 // positive regulation of angiogenesis // inferred from direct assay /// 0045766 // positive regulation of angiogenesis // inferred from mutant phenotype /// 0045785 // positive regulation of cell adhesion // inferred from mutant phenotype /// 0045927 // positive regulation of growth // inferred from direct assay /// 0046677 // response to antibiotic // inferred from direct assay /// 0050679 // positive regulation of epithelial cell proliferation // inferred from direct assay /// 0051216 // cartilage development // inferred from expression pattern /// 0071347 // cellular response to interleukin-1 // inferred from direct assay /// 0071356 // cellular response to tumor necrosis factor // inferred from expression pattern /// 0071467 // cellular response to pH // inferred from direct assay /// 0071493 // cellular response to UV-B // inferred from direct assay /// 1900106 // positive regulation of hyaluranon cable assembly // inferred from direct assay","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005764 // lysosome // inferred from direct assay /// 0005764 // lysosome // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from direct assay /// 0036117 // hyaluranon cable // inferred from direct assay","0001618 // viral receptor activity // inferred from direct assay /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004415 // hyalurononglucosaminidase activity // inferred from direct assay /// 0004415 // hyalurononglucosaminidase activity // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity, acting on glycosyl bonds // inferred from electronic annotation /// 0050501 // hyaluronan synthase activity // inferred from direct assay","chr3:50337912-50341004 (-) // 100.0 // p21.31"]
["11758957_x_at",-0.18498993,-0.079649925,0.05626774,-0.003025055,0.06805086,0.003025055,0.65271133,0.27793843,-1.0659509,-0.09214094,1.0659509,"down","WWP1",11059.0,"0006464 // cellular protein modification process // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0007417 // central nervous system development // non-traceable author statement /// 0016567 // protein ubiquitination // traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0042787 // protein ubiquitination involved in ubiquitin-dependent protein catabolic process // not recorded /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0046718 // viral entry into host cell // traceable author statement","0000151 // ubiquitin ligase complex // non-traceable author statement /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // not recorded /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // not recorded /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0004842 // ubiquitin-protein ligase activity // not recorded /// 0004842 // ubiquitin-protein ligase activity // traceable author statement /// 0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation","chr8:87354966-87480677 (+) // 97.65 // q21.3"]
["11721516_at",0.015731812,0.07498646,-0.015732288,-0.065000534,0.015539169,-0.015539169,0.63774925,0.25852117,1.0328726,0.046662256,1.0328726,"up","SUDS3",64426.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation","0016580 // Sin3 complex // inferred from sequence or structural similarity /// 0016580 // Sin3 complex // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from electronic annotation /// 0042826 // histone deacetylase binding // inferred from sequence or structural similarity /// 0042826 // histone deacetylase binding // inferred from electronic annotation","chr12:118814184-118855840 (+) // 99.96 // q24.23"]
["200000_PM_s_at",0.0374918,0.04953003,0.076010704,-0.0374918,-0.14810848,-0.05863762,0.25362316,0.019164193,1.098669,0.13575687,1.098669,"up","PRPF8",10594.0,"0000375 // RNA splicing, via transesterification reactions // traceable author statement /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred from electronic annotation /// 0006397 // mRNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005682 // U5 snRNP // traceable author statement /// 0016607 // nuclear speck // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay","0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr17:1553923-1588100 (-) // 99.2 // p13.3"]
["11744271_a_at",-0.0266428,0.0266428,0.062671185,-0.06510496,-0.11461735,0.04286337,0.6544249,0.2796956,1.0471804,0.06651002,1.0471804,"up","ULK1",8408.0,"0000045 // autophagic vacuole assembly // inferred from electronic annotation /// 0006468 // protein phosphorylation // non-traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006914 // autophagy // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007265 // Ras protein signal transduction // inferred from electronic annotation /// 0007409 // axonogenesis // inferred from electronic annotation /// 0008104 // protein localization // inferred from mutant phenotype /// 0010506 // regulation of autophagy // inferred from direct assay /// 0010506 // regulation of autophagy // inferred from mutant phenotype /// 0010506 // regulation of autophagy // inferred from electronic annotation /// 0010508 // positive regulation of autophagy // inferred from sequence or structural similarity /// 0010508 // positive regulation of autophagy // inferred from electronic annotation /// 0016239 // positive regulation of macroautophagy // inferred from mutant phenotype /// 0016310 // phosphorylation // inferred from electronic annotation /// 0021707 // cerebellar granule cell differentiation // inferred from electronic annotation /// 0021933 // radial glia guided migration of cerebellar granule cell // inferred from electronic annotation /// 0031102 // neuron projection regeneration // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from mutant phenotype /// 0031175 // neuron projection development // inferred from electronic annotation /// 0031623 // receptor internalization // inferred from electronic annotation /// 0031669 // cellular response to nutrient levels // inferred from sequence or structural similarity /// 0031669 // cellular response to nutrient levels // inferred from electronic annotation /// 0042594 // response to starvation // inferred from sequence or structural similarity /// 0042594 // response to starvation // inferred from electronic annotation /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from electronic annotation /// 0048671 // negative regulation of collateral sprouting // inferred from electronic annotation /// 0048675 // axon extension // inferred from electronic annotation /// 0051386 // regulation of nerve growth factor receptor signaling pathway // inferred from electronic annotation","0000407 // pre-autophagosomal structure // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005776 // autophagic vacuole // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0034045 // pre-autophagosomal structure membrane // inferred from direct assay /// 0034045 // pre-autophagosomal structure membrane // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0070969 // ULK1-ATG13-FIP200 complex // inferred from physical interaction /// 0070969 // ULK1-ATG13-FIP200 complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // non-traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0032403 // protein complex binding // inferred from physical interaction","chr12:132379195-132407695 (+) // 95.0 // q24.33"]
["11742318_at",-0.13313007,0.041692734,-0.007887125,0.027704954,-0.05895281,0.007887125,0.8862612,0.6862083,-1.0177063,-0.025321238,1.0177063,"down","OR6K6",128371.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr1:158724509-158725677 (+) // 99.66 // q23.1"]
["11740622_a_at",-0.10251665,0.052111387,-0.016478539,-0.085485935,0.12888885,0.016478539,0.85197455,0.6095684,-1.0297221,-0.04225503,1.0297221,"down","GPR115",221393.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007218 // neuropeptide signaling pathway // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement","chr6:47666280-47689757 (+) // 96.27 // p12.3"]
["11745789_a_at",-0.021180153,-0.018605232,0.006178856,-0.006178856,0.05222702,0.07006168,0.4801549,0.11260158,-1.0351971,-0.049905535,1.0351971,"down","TMEM135",65084.0,"0007031 // peroxisome organization // inferred from sequence or structural similarity","0005777 // peroxisome // inferred from sequence or structural similarity /// 0005777 // peroxisome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr11:86748883-87034802 (+) // 99.04 // q14.2"]
["11743633_a_at",0.01493454,0.026979446,-0.022069931,0.021307945,-0.01493454,-0.027775764,0.82194567,0.5452416,1.0095755,0.0137487855,1.0095755,"up","STX2",2054.0,"0000910 // cytokinesis // inferred from electronic annotation /// 0000920 // cytokinetic cell separation // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007340 // acrosome reaction // inferred from sequence or structural similarity /// 0007398 // ectoderm development // traceable author statement /// 0009887 // organ morphogenesis // traceable author statement /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0030033 // microvillus assembly // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030855 // epithelial cell differentiation // inferred from electronic annotation /// 0045026 // plasma membrane fusion // inferred from electronic annotation /// 0048546 // digestive tract morphogenesis // inferred from electronic annotation","0005625 // soluble fraction // traceable author statement /// 0005792 // microsome // traceable author statement /// 0005911 // cell-cell junction // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from direct assay /// 0030133 // transport vesicle // inferred from electronic annotation /// 0030496 // midbody // inferred from electronic annotation /// 0045121 // membrane raft // inferred from electronic annotation","0000149 // SNARE binding // inferred from electronic annotation /// 0005484 // SNAP receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0048306 // calcium-dependent protein binding // inferred from sequence or structural similarity","chr12:131274144-131323811 (-) // 87.36 // q24.33"]
["11716736_at",0.01463604,0.04660511,0.0884037,-0.01463604,-0.089102745,-0.093655586,0.28187546,0.02561674,1.0834854,0.11567967,1.0834854,"up","PRPF19",27339.0,"0000209 // protein polyubiquitination // inferred from direct assay /// 0000245 // spliceosomal complex assembly // inferred from mutant phenotype /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0001833 // inner cell mass cell proliferation // inferred from electronic annotation /// 0006281 // DNA repair // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0048711 // positive regulation of astrocyte differentiation // inferred from electronic annotation","0000151 // ubiquitin ligase complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005811 // lipid particle // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0034450 // ubiquitin-ubiquitin ligase activity // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction","chr11:60658021-60674056 (-) // 97.13 // q12.2"]
["11720717_a_at",0.08377075,0.06580305,0.113547325,-0.06580305,-0.118098736,-0.1550932,0.11914195,0.0024096125,1.1492602,0.20070542,1.1492602,"up","FGF13",2258.0,"0000165 // MAPK cascade // inferred from direct assay /// 0007165 // signal transduction // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0007399 // nervous system development // traceable author statement /// 0045860 // positive regulation of protein kinase activity // inferred from genetic interaction /// 2001257 // regulation of cation channel activity // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from physical interaction","0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // inferred from electronic annotation /// 0008083 // growth factor activity // traceable author statement /// 0030295 // protein kinase activator activity // inferred from genetic interaction","chrX:137713733-137793959 (-) // 91.8 // q26.3"]
["11761879_at",0.0,0.0,0.06931925,0.080065966,-0.044757128,-0.2689314,0.73225135,0.389345,1.0725023,0.10098068,1.0725023,"up","EXOSC3",51010.0,"0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0006364 // rRNA processing // inferred from direct assay /// 0006364 // rRNA processing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0043928 // exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay // inferred from mutant phenotype /// 0043928 // exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay // traceable author statement /// 0045006 // DNA deamination // inferred from direct assay /// 0045190 // isotype switching // inferred from sequence or structural similarity /// 0045190 // isotype switching // inferred from electronic annotation /// 0071034 // CUT catabolic process // inferred from mutant phenotype","0000176 // nuclear exosome (RNase complex) // inferred from direct assay /// 0000177 // cytoplasmic exosome (RNase complex) // inferred from direct assay /// 0000178 // exosome (RNase complex) // inferred from direct assay /// 0000178 // exosome (RNase complex) // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0035327 // transcriptionally active chromatin // inferred from mutant phenotype","0000175 // 3'-5'-exoribonuclease activity // non-traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0004532 // exoribonuclease activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction","chr9:37766974-37785058 (-) // 71.32 // p13.2"]
["11739918_a_at",0.010601759,-0.0029859543,0.010277271,-0.13183403,0.0029861927,-0.042943478,0.5732189,0.1875567,1.044801,0.063228175,1.044801,"up","RASGRP3",25780.0,"0000165 // MAPK cascade // non-traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007265 // Ras protein signal transduction // inferred from electronic annotation /// 0032854 // positive regulation of Rap GTPase activity // inferred from direct assay /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0043087 // regulation of GTPase activity // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0032045 // guanyl-nucleotide exchange factor complex // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0004871 // signal transducer activity // traceable author statement /// 0005085 // guanyl-nucleotide exchange factor activity // traceable author statement /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005088 // Ras guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005509 // calcium ion binding // non-traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0017016 // Ras GTPase binding // inferred from electronic annotation /// 0019900 // kinase binding // inferred from electronic annotation /// 0019992 // diacylglycerol binding // non-traceable author statement /// 0046582 // Rap GTPase activator activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:33661390-33789797 (+) // 96.71 // p22.3"]
["11751589_a_at",0.038882256,0.06301403,0.1343174,-0.038882256,-0.0434227,-0.055090904,0.21808815,0.012781966,1.0901574,0.12453643,1.0901574,"up","NMT1",4836.0,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0006498 // N-terminal protein lipidation // non-traceable author statement /// 0006499 // N-terminal protein myristoylation // non-traceable author statement /// 0006499 // N-terminal protein myristoylation // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0008629 // induction of apoptosis by intracellular signals // traceable author statement /// 0008633 // activation of pro-apoptotic gene products // traceable author statement /// 0009249 // protein lipoylation // traceable author statement /// 0016032 // viral reproduction // traceable author statement","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0030054 // cell junction // inferred from direct assay","0003824 // catalytic activity // traceable author statement /// 0004379 // glycylpeptide N-tetradecanoyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0019107 // myristoyltransferase activity // inferred from electronic annotation","chr17:43138687-43176211 (+) // 81.33 // q21.31"]
["11739535_s_at",-0.089839935,-0.12848854,-0.062069893,0.1031332,0.062069893,0.1417942,0.12643234,0.0028507935,-1.145358,-0.19579856,1.145358,"down","FN1",2335.0,"0001525 // angiogenesis // inferred from electronic annotation /// 0002576 // platelet degranulation // traceable author statement /// 0006916 // anti-apoptosis // inferred from electronic annotation /// 0006953 // acute-phase response // inferred from electronic annotation /// 0007044 // cell-substrate junction assembly // inferred from electronic annotation /// 0007155 // cell adhesion // non-traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007160 // cell-matrix adhesion // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0009611 // response to wounding // non-traceable author statement /// 0010952 // positive regulation of peptidase activity // inferred from electronic annotation /// 0016477 // cell migration // non-traceable author statement /// 0018149 // peptide cross-linking // inferred from direct assay /// 0030168 // platelet activation // traceable author statement /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0034446 // substrate adhesion-dependent cell spreading // inferred from direct assay /// 0042060 // wound healing // inferred from electronic annotation /// 0050900 // leukocyte migration // traceable author statement","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005577 // fibrinogen complex // inferred from direct assay /// 0005578 // proteinaceous extracellular matrix // non-traceable author statement /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005604 // basement membrane // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from direct assay /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from sequence or structural similarity /// 0031012 // extracellular matrix // inferred from electronic annotation /// 0031093 // platelet alpha granule lumen // traceable author statement","0002020 // protease binding // inferred from electronic annotation /// 0005201 // extracellular matrix structural constituent // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005518 // collagen binding // non-traceable author statement /// 0008201 // heparin binding // non-traceable author statement /// 0008201 // heparin binding // inferred from electronic annotation /// 0016504 // peptidase activator activity // inferred from electronic annotation /// 0045340 // mercury ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:216225180-216300791 (-) // 99.76 // q35"]
["11716181_x_at",-0.037623405,0.05881262,-0.15793848,0.028114319,-0.028114319,0.14996815,0.6763063,0.30760932,-1.0684893,-0.09557248,1.0684893,"down","MED15",51586.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0010467 // gene expression // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016592 // mediator complex // inferred from electronic annotation","0001104 // RNA polymerase II transcription cofactor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr22:20861828-20941904 (+) // 88.62 // q11.21"]
["11715421_a_at",0.061615944,0.040109634,0.062623024,-0.048638344,-0.07950497,-0.040109634,0.10107897,0.0013908192,1.0798771,0.11086718,1.0798771,"up","CCT2",10576.0,"0006457 // protein folding // non-traceable author statement /// 0006457 // protein folding // traceable author statement /// 0006457 // protein folding // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0044267 // cellular protein metabolic process // inferred from electronic annotation /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement /// 0051131 // chaperone-mediated protein complex assembly // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // non-traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005832 // chaperonin-containing T-complex // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // non-traceable author statement /// 0051082 // unfolded protein binding // inferred from electronic annotation","chr12:69979238-69995349 (+) // 92.1 // q15"]
["11763140_at",0.13333607,0.09445572,-0.35878944,-0.09445572,-0.23403549,0.17788744,0.99272704,0.9753686,1.0045402,0.0065353066,1.0045402,"up",-0.09445572,-0.23403549,0.17788744,0.13333607,0.09445572,-0.35878944]
["11744977_at",-0.042402744,0.07091808,-0.03191614,-0.053848267,0.03191614,0.053610325,0.9412195,0.8224785,-1.008138,-0.011693053,1.008138,"down","MGC45922",284365.0,"","","","chr19:51320936-51322133 (+) // 92.47 // q13.33"]
["11717213_a_at",-0.087825775,-0.013914108,0.12460899,0.011262894,-0.011262894,0.04041481,0.9789424,0.93161803,-1.0040622,-0.00584861,1.0040622,"down","NSMAF",8439.0,"0006672 // ceramide metabolic process // traceable author statement /// 0007165 // signal transduction // traceable author statement","0005625 // soluble fraction // traceable author statement /// 0005737 // cytoplasm // traceable author statement","0005057 // receptor signaling protein activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr8:59496066-59572404 (-) // 96.84 // q12.1"]
["11754888_a_at",0.07952213,0.014831543,0.04210472,-0.014831543,-0.024954796,-0.025030136,0.27748367,0.024426721,1.0476027,0.06709162,1.0476027,"up","ADSSL1",122622.0,"0002376 // immune system process // non-traceable author statement /// 0006144 // purine base metabolic process // traceable author statement /// 0006163 // purine nucleotide metabolic process // inferred from electronic annotation /// 0006164 // purine nucleotide biosynthetic process // inferred from electronic annotation /// 0006167 // AMP biosynthetic process // inferred from direct assay /// 0009168 // purine ribonucleoside monophosphate biosynthetic process // traceable author statement /// 0044208 // 'de novo' AMP biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0004019 // adenylosuccinate synthase activity // inferred from direct assay /// 0004019 // adenylosuccinate synthase activity // inferred from electronic annotation /// 0005525 // GTP binding // non-traceable author statement /// 0005525 // GTP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0042301 // phosphate ion binding // non-traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation","chr14:105210817-105213645 (+) // 84.06 // q32.33"]
["11743791_s_at",0.09826326,0.06305218,0.13245964,-0.23530293,-0.13583374,-0.063052654,0.20240684,0.010733249,1.1831679,0.24265486,1.1831679,"up","FRS2",10818.0,"0000186 // activation of MAPKK activity // traceable author statement /// 0000187 // activation of MAPK activity // inferred from electronic annotation /// 0001702 // gastrulation with mouth forming second // inferred from electronic annotation /// 0001759 // organ induction // inferred from electronic annotation /// 0003281 // ventricular septum development // inferred from electronic annotation /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0007185 // transmembrane receptor protein tyrosine phosphatase signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007405 // neuroblast proliferation // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from genetic interaction /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from electronic annotation /// 0008595 // anterior/posterior axis specification, embryo // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation /// 0046619 // optic placode formation involved in camera-type eye formation // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0050678 // regulation of epithelial cell proliferation // inferred from electronic annotation /// 0060527 // prostate epithelial cord arborization involved in prostate glandular acinus morphogenesis // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005068 // transmembrane receptor protein tyrosine kinase adaptor activity // traceable author statement /// 0005068 // transmembrane receptor protein tyrosine kinase adaptor activity // inferred from electronic annotation /// 0005104 // fibroblast growth factor receptor binding // inferred from physical interaction /// 0005158 // insulin receptor binding // inferred from electronic annotation /// 0005168 // neurotrophin TRKA receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0019211 // phosphatase activator activity // traceable author statement","chr12:69864128-69973573 (+) // 98.22 // q15"]
["11736531_a_at",0.2588339,0.12757778,-0.07344723,-0.10886741,0.05769849,-0.05769825,0.64241743,0.26454931,1.1023716,0.14061059,1.1023716,"up","LRRFIP1",9208.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0045892 // negative regulation of transcription, DNA-dependent // non-traceable author statement","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005856 // cytoskeleton // traceable author statement","0003677 // DNA binding // inferred from electronic annotation /// 0003725 // double-stranded RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr2:238536223-238690286 (+) // 94.48 // q37.3"]
["11715737_at",0.08536053,-0.07642937,-0.11324644,0.06255102,0.026016235,-0.026015759,0.7686393,0.4480189,-1.0393072,-0.0556222,1.0393072,"down","CASC3",22794.0,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0008298 // intracellular mRNA localization // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0051028 // mRNA transport // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016607 // nuclear speck // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0035145 // exon-exon junction complex // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from direct assay","chr17:38296506-38328424 (+) // 93.04 // q21.1"]
["11757973_x_at",-0.08385944,-0.009582043,-0.02138424,0.104261875,0.010116577,0.009581566,0.476977,0.11087458,-1.0567216,-0.0795953,1.0567216,"down","NMT2",9397.0,"0006499 // N-terminal protein myristoylation // inferred from electronic annotation /// 0009249 // protein lipoylation // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0046788 // egress of virus within host cell // traceable author statement","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay","0003824 // catalytic activity // traceable author statement /// 0004379 // glycylpeptide N-tetradecanoyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation","chr10:15149864-15151212 (-) // 77.05 // p13"]
["11758894_at",0.056512833,0.32918596,-0.0855546,-0.20687771,0.30173588,-0.056512833,0.88202757,0.67585677,1.0623553,0.08726632,1.0623553,"up","PARD3",56288.0,"0006461 // protein complex assembly // traceable author statement /// 0006612 // protein targeting to membrane // inferred from sequence or structural similarity /// 0007049 // cell cycle // inferred from electronic annotation /// 0007163 // establishment or maintenance of cell polarity // traceable author statement /// 0007205 // protein kinase C-activating G-protein coupled receptor signaling pathway // traceable author statement /// 0007409 // axonogenesis // traceable author statement /// 0008356 // asymmetric cell division // traceable author statement /// 0034329 // cell junction assembly // traceable author statement /// 0045216 // cell-cell junction organization // traceable author statement /// 0051301 // cell division // inferred from electronic annotation /// 0070830 // tight junction assembly // inferred from sequence or structural similarity /// 0070830 // tight junction assembly // traceable author statement /// 0090162 // establishment of epithelial cell polarity // inferred from sequence or structural similarity","0005737 // cytoplasm // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from direct assay /// 0005911 // cell-cell junction // inferred from sequence or structural similarity /// 0005911 // cell-cell junction // inferred from electronic annotation /// 0005912 // adherens junction // inferred from electronic annotation /// 0005913 // cell-cell adherens junction // inferred from electronic annotation /// 0005923 // tight junction // inferred from direct assay /// 0005923 // tight junction // inferred from sequence or structural similarity /// 0005923 // tight junction // inferred from electronic annotation /// 0005923 // tight junction // traceable author statement /// 0005938 // cell cortex // inferred from electronic annotation /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from electronic annotation","0005080 // protein kinase C binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005546 // phosphatidylinositol-4,5-bisphosphate binding // inferred from sequence or structural similarity /// 0005547 // phosphatidylinositol-3,4,5-trisphosphate binding // inferred from sequence or structural similarity /// 0008289 // lipid binding // inferred from electronic annotation /// 0032266 // phosphatidylinositol-3-phosphate binding // inferred from sequence or structural similarity","chr10:34398488-35104211 (-) // 95.5 // p11.22"]
["11762379_at",0.032768965,-0.061301947,0.076895714,0.13428569,-0.032768965,-0.05166745,0.9981676,0.9948225,-1.0003436,-4.9556885E-4,1.0003436,"down","NOS1",4842.0,"0001666 // response to hypoxia // inferred from expression pattern /// 0002028 // regulation of sodium ion transport // inferred from electronic annotation /// 0006527 // arginine catabolic process // inferred by curator /// 0006809 // nitric oxide biosynthetic process // inferred from electronic annotation /// 0006809 // nitric oxide biosynthetic process // inferred from sequence or structural similarity /// 0006941 // striated muscle contraction // inferred from electronic annotation /// 0007520 // myoblast fusion // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0009408 // response to heat // inferred from direct assay /// 0010523 // negative regulation of calcium ion transport into cytosol // traceable author statement /// 0018119 // peptidyl-cysteine S-nitrosylation // inferred from electronic annotation /// 0033555 // multicellular organismal response to stress // inferred from mutant phenotype /// 0035066 // positive regulation of histone acetylation // inferred from electronic annotation /// 0042136 // neurotransmitter biosynthetic process // traceable author statement /// 0042738 // exogenous drug catabolic process // inferred from electronic annotation /// 0043267 // negative regulation of potassium ion transport // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045909 // positive regulation of vasodilation // inferred from direct assay /// 0045909 // positive regulation of vasodilation // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0051346 // negative regulation of hydrolase activity // inferred from electronic annotation /// 0051612 // negative regulation of serotonin uptake // inferred from electronic annotation /// 0051926 // negative regulation of calcium ion transport // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0055117 // regulation of cardiac muscle contraction // traceable author statement /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation","0001917 // photoreceptor inner segment // inferred from sequence or structural similarity /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016529 // sarcoplasmic reticulum // inferred from direct assay /// 0042383 // sarcolemma // inferred from direct assay /// 0042383 // sarcolemma // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity","0004517 // nitric-oxide synthase activity // inferred from electronic annotation /// 0004517 // nitric-oxide synthase activity // inferred from sequence or structural similarity /// 0005506 // iron ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0010181 // FMN binding // inferred from sequence or structural similarity /// 0010181 // FMN binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0020037 // heme binding // inferred from sequence or structural similarity /// 0020037 // heme binding // inferred from electronic annotation /// 0034617 // tetrahydrobiopterin binding // non-traceable author statement /// 0034618 // arginine binding // traceable author statement /// 0046870 // cadmium ion binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050660 // flavin adenine dinucleotide binding // inferred from sequence or structural similarity /// 0050660 // flavin adenine dinucleotide binding // inferred from electronic annotation /// 0050661 // NADP binding // inferred from sequence or structural similarity /// 0050661 // NADP binding // inferred from electronic annotation","chr12:117645952-117799411 (-) // 99.68 // q24.22"]
["11726766_x_at",-0.0020008087,0.011457443,-3.080368E-4,3.080368E-4,-0.0026273727,0.048781395,0.80292064,0.5095649,-1.0086585,-0.0124378465,1.0086585,"down","TIPRL",261726.0,"0000077 // DNA damage checkpoint // inferred from mutant phenotype /// 0034048 // negative regulation of protein phosphatase type 2A activity // inferred from direct assay","0005737 // cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr1:168148082-168171349 (+) // 96.75 // q24.2"]
["11739827_a_at",0.15108061,-0.12852025,-0.02126813,0.1322341,-0.060320377,0.02126789,0.9231309,0.771856,-1.0214579,-0.030629758,1.0214579,"down","HTR3A",3359.0,"0006810 // transport // non-traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006810 // transport // traceable author statement /// 0006811 // ion transport // inferred from electronic annotation /// 0007210 // serotonin receptor signaling pathway // inferred from direct assay /// 0007210 // serotonin receptor signaling pathway // non-traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007586 // digestion // traceable author statement /// 0034220 // ion transmembrane transport // traceable author statement /// 0042220 // response to cocaine // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0030054 // cell junction // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004872 // receptor activity // traceable author statement /// 0004993 // serotonin receptor activity // inferred from direct assay /// 0004993 // serotonin receptor activity // non-traceable author statement /// 0004993 // serotonin receptor activity // traceable author statement /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005230 // extracellular ligand-gated ion channel activity // inferred from electronic annotation /// 0005230 // extracellular ligand-gated ion channel activity // non-traceable author statement /// 0005232 // serotonin-activated cation-selective channel activity // traceable author statement /// 0005232 // serotonin-activated cation-selective channel activity // inferred from electronic annotation /// 0005249 // voltage-gated potassium channel activity // inferred from electronic annotation /// 0051378 // serotonin binding // inferred from direct assay","chr11:113845602-113861032 (+) // 98.94 // q23.2"]
["11739816_a_at",-0.034519196,0.081793785,-0.041086674,0.06374502,0.01808691,-0.01808691,0.89156413,0.70048636,-1.0133873,-0.019185686,1.0133873,"down","DLG4",1742.0,"0001973 // adenosine receptor signaling pathway // inferred from sequence or structural similarity /// 0006461 // protein complex assembly // inferred from direct assay /// 0007165 // signal transduction // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007399 // nervous system development // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007612 // learning // traceable author statement /// 0016188 // synaptic vesicle maturation // inferred from electronic annotation /// 0035176 // social behavior // inferred from electronic annotation /// 0035418 // protein localization to synapse // inferred from direct assay /// 0035641 // locomotory exploration behavior // inferred from electronic annotation /// 0045184 // establishment of protein localization // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0048169 // regulation of long-term neuronal synaptic plasticity // inferred from electronic annotation /// 0050806 // positive regulation of synaptic transmission // inferred from sequence or structural similarity /// 0050885 // neuromuscular process controlling balance // inferred from electronic annotation /// 0060997 // dendritic spine morphogenesis // inferred from sequence or structural similarity /// 0060997 // dendritic spine morphogenesis // inferred from electronic annotation /// 0071625 // vocalization behavior // inferred from electronic annotation /// 0097113 // alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate receptor clustering // inferred from sequence or structural similarity /// 0097113 // alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate receptor clustering // traceable author statement /// 0097120 // receptor localization to synapse // inferred from sequence or structural similarity /// 2000310 // regulation of N-methyl-D-aspartate selective glutamate receptor activity // inferred from sequence or structural similarity /// 2000463 // positive regulation of excitatory postsynaptic membrane potential // inferred from sequence or structural similarity /// 2000821 // regulation of grooming behavior // inferred from electronic annotation","0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0008328 // ionotropic glutamate receptor complex // inferred from sequence or structural similarity /// 0014069 // postsynaptic density // inferred from sequence or structural similarity /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0019717 // synaptosome // inferred from sequence or structural similarity /// 0019717 // synaptosome // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030666 // endocytic vesicle membrane // traceable author statement /// 0030863 // cortical cytoskeleton // inferred from direct assay /// 0031234 // extrinsic to internal side of plasma membrane // inferred from electronic annotation /// 0032281 // alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective glutamate receptor complex // inferred from electronic annotation /// 0032839 // dendrite cytoplasm // inferred from sequence or structural similarity /// 0044224 // juxtaparanode region of axon // inferred from electronic annotation /// 0044306 // neuron projection terminus // inferred from electronic annotation /// 0044309 // neuron spine // inferred from sequence or structural similarity /// 0044309 // neuron spine // inferred from electronic annotation /// 0045202 // synapse // inferred from direct assay /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from direct assay /// 0045211 // postsynaptic membrane // inferred from electronic annotation /// 0060076 // excitatory synapse // inferred from sequence or structural similarity /// 0060076 // excitatory synapse // inferred from electronic annotation","0005102 // receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from electronic annotation /// 0019903 // protein phosphatase binding // inferred from electronic annotation /// 0030165 // PDZ domain binding // inferred from electronic annotation /// 0031812 // P2Y1 nucleotide receptor binding // inferred from sequence or structural similarity /// 0035255 // ionotropic glutamate receptor binding // inferred from sequence or structural similarity /// 0035255 // ionotropic glutamate receptor binding // inferred from electronic annotation /// 0045031 // ATP-activated nucleotide receptor activity // inferred from sequence or structural similarity /// 0045032 // ADP-activated nucleotide receptor activity // inferred from sequence or structural similarity /// 0097110 // scaffold protein binding // inferred from sequence or structural similarity /// 0097110 // scaffold protein binding // inferred from electronic annotation","chr17:7093208-7123369 (-) // 98.87 // p13.1"]
["11764248_s_at",0.09925079,0.019402504,0.18597412,-0.0916605,-0.019402504,-0.104515076,0.3137977,0.034253508,1.1277145,0.17340189,1.1277145,"up","LDLRAD3",143458.0,"","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation","chr11:36253241-36253685 (+) // 92.34 // p13"]
["11756264_s_at",0.15719056,0.028257608,-0.2819221,-0.13205957,0.13958025,-0.028257608,0.9596318,0.876512,-1.017653,-0.025245698,1.017653,"down","IPW /// LOC100506948 /// SNORD107 /// SNORD115-13 /// SNORD115-26 /// SNORD115-7 /// SNORD116-28","100033444 /// 100033450 /// 100033802 /// 100033820 /// 100506948 /// 3653 /// 91380","","","","chr15:25365494-25367626 (+) // 64.45 // q11.2"]
["11735386_a_at",0.115285635,-0.0111961365,-0.31959438,0.07189798,0.011195898,-0.04726243,0.8311715,0.5647605,-1.0597903,-0.08377876,1.0597903,"down","DACT1",51339.0,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0030178 // negative regulation of Wnt receptor signaling pathway // inferred from genetic interaction /// 0045732 // positive regulation of protein catabolic process // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr14:59104756-59115036 (+) // 98.19 // q23.1"]
["11760301_x_at",-0.017602444,-0.04920864,-0.10721636,0.098611355,0.017602444,0.12804365,0.29770756,0.029771915,-1.1014686,-0.13942832,1.1014686,"down","HEXA",3073.0,"0001501 // skeletal system development // inferred from electronic annotation /// 0006665 // sphingolipid metabolic process // traceable author statement /// 0006687 // glycosphingolipid metabolic process // traceable author statement /// 0006689 // ganglioside catabolic process // inferred from electronic annotation /// 0007040 // lysosome organization // inferred from electronic annotation /// 0007605 // sensory perception of sound // inferred from electronic annotation /// 0007628 // adult walking behavior // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0019915 // lipid storage // inferred from electronic annotation /// 0019953 // sexual reproduction // inferred from electronic annotation /// 0030203 // glycosaminoglycan metabolic process // inferred from electronic annotation /// 0042552 // myelination // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0048667 // cell morphogenesis involved in neuron differentiation // inferred from electronic annotation /// 0050884 // neuromuscular process controlling posture // inferred from electronic annotation /// 0050885 // neuromuscular process controlling balance // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0043202 // lysosomal lumen // traceable author statement","0004563 // beta-N-acetylhexosaminidase activity // inferred from electronic annotation /// 0043169 // cation binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from direct assay","chr15:72636197-72668355 (-) // 94.82 // q23"]
["11764156_s_at",-0.016795158,-0.0064496994,0.009212494,0.0064496994,-0.046300888,0.027943611,0.9932431,0.977222,-1.000491,-7.082227E-4,1.000491,"down","TMEM41B",440026.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr11:9302551-9303064 (-) // 89.76 // p15.4"]
["11731980_at",0.054358006,0.054474354,-0.054358006,-0.15917158,-0.06735897,0.054358006,0.7079031,0.3513919,1.053762,0.07554901,1.053762,"up","FNDC7",163479.0,"","0005576 // extracellular region // inferred from electronic annotation","","chr1:109255555-109285365 (+) // 99.45 // p13.3"]
["11728493_a_at",0.01671791,0.060447216,0.062351704,-0.01671791,-0.23541498,-0.06463528,0.43968537,0.08902276,1.1111819,0.15209495,1.1111819,"up","ZNF197",10168.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0016032 // viral reproduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:44666510-44689960 (+) // 39.6 // p21.31"]
["11762342_at",-0.034851074,-0.03965664,-0.39458036,0.034850597,0.089523315,0.09535456,0.5039462,0.12981498,-1.1725143,-0.22960554,1.1725143,"down","","","","","","chr6:144165697-144178582 (-) // 62.55 // q24.2"]
["11759134_a_at",0.06241846,-0.33577728,-0.123366356,-0.028772593,0.028772593,0.18372631,0.6022852,0.21480681,-1.1435218,-0.19348384,1.1435218,"down","CHRNA3",1136.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // non-traceable author statement /// 0006811 // ion transport // inferred from electronic annotation /// 0006937 // regulation of muscle contraction // inferred from electronic annotation /// 0006940 // regulation of smooth muscle contraction // inferred from sequence or structural similarity /// 0006940 // regulation of smooth muscle contraction // inferred from electronic annotation /// 0007165 // signal transduction // inferred from direct assay /// 0007171 // activation of transmembrane receptor protein tyrosine kinase activity // inferred from sequence or structural similarity /// 0007171 // activation of transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007271 // synaptic transmission, cholinergic // inferred from sequence or structural similarity /// 0007271 // synaptic transmission, cholinergic // inferred from electronic annotation /// 0007399 // nervous system development // inferred from mutant phenotype /// 0007507 // heart development // inferred from electronic annotation /// 0007626 // locomotory behavior // inferred from sequence or structural similarity /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0010035 // response to inorganic substance // inferred from electronic annotation /// 0014056 // regulation of acetylcholine secretion // inferred from sequence or structural similarity /// 0014056 // regulation of acetylcholine secretion // inferred from electronic annotation /// 0035094 // response to nicotine // inferred from electronic annotation /// 0035095 // behavioral response to nicotine // inferred from mutant phenotype /// 0035095 // behavioral response to nicotine // inferred from electronic annotation /// 0042391 // regulation of membrane potential // inferred from sequence or structural similarity /// 0042391 // regulation of membrane potential // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0048814 // regulation of dendrite morphogenesis // inferred from sequence or structural similarity /// 0048814 // regulation of dendrite morphogenesis // inferred from electronic annotation /// 0060079 // regulation of excitatory postsynaptic membrane potential // inferred from sequence or structural similarity /// 0060079 // regulation of excitatory postsynaptic membrane potential // inferred from electronic annotation /// 0060084 // synaptic transmission involved in micturition // inferred from mutant phenotype /// 0060084 // synaptic transmission involved in micturition // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005892 // acetylcholine-gated channel complex // inferred from direct assay /// 0005892 // acetylcholine-gated channel complex // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from sequence or structural similarity /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030425 // dendrite // inferred from sequence or structural similarity /// 0030425 // dendrite // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from sequence or structural similarity /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004889 // acetylcholine-activated cation-selective channel activity // inferred from direct assay /// 0004889 // acetylcholine-activated cation-selective channel activity // traceable author statement /// 0004889 // acetylcholine-activated cation-selective channel activity // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005230 // extracellular ligand-gated ion channel activity // inferred from electronic annotation /// 0015276 // ligand-gated ion channel activity // traceable author statement /// 0015464 // acetylcholine receptor activity // inferred from direct assay /// 0015464 // acetylcholine receptor activity // inferred from electronic annotation /// 0042166 // acetylcholine binding // inferred by curator /// 0042166 // acetylcholine binding // inferred from electronic annotation","chr15:78887651-78913322 (-) // 78.8 // q25.1"]
["11723200_s_at",-0.15428257,-0.08892059,0.122917175,0.030670166,0.12132263,-0.030670166,0.76548266,0.44252908,-1.057411,-0.08053618,1.057411,"down","HNRNPA3",220988.0,"0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0030529 // ribonucleoprotein complex // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement","chr2:178077022-178088686 (+) // 93.56 // q31.2"]
["11718259_at",0.022279263,0.06672001,0.09371424,-0.022279263,-0.0793829,-0.03817606,0.23832183,0.016157348,1.0773726,0.10751721,1.0773726,"up","NOTCH1",4851.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001708 // cell fate specification // inferred from electronic annotation /// 0001837 // epithelial to mesenchymal transition // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0002040 // sprouting angiogenesis // inferred from electronic annotation /// 0002052 // positive regulation of neuroblast proliferation // inferred from electronic annotation /// 0002437 // inflammatory response to antigenic stimulus // inferred from electronic annotation /// 0003180 // aortic valve morphogenesis // inferred from mutant phenotype /// 0003219 // cardiac right ventricle formation // inferred from electronic annotation /// 0003264 // regulation of cardioblast proliferation // inferred from electronic annotation /// 0003270 // Notch signaling pathway involved in regulation of secondary heart field cardioblast proliferation // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006955 // immune response // non-traceable author statement /// 0006959 // humoral immune response // inferred from electronic annotation /// 0007219 // Notch signaling pathway // inferred from mutant phenotype /// 0007219 // Notch signaling pathway // traceable author statement /// 0007219 // Notch signaling pathway // inferred from electronic annotation /// 0007220 // Notch receptor processing // traceable author statement /// 0007221 // positive regulation of transcription of Notch receptor target // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0007368 // determination of left/right symmetry // inferred from electronic annotation /// 0007386 // compartment pattern specification // inferred from electronic annotation /// 0007409 // axonogenesis // inferred from electronic annotation /// 0007440 // foregut morphogenesis // inferred from electronic annotation /// 0007492 // endoderm development // inferred from electronic annotation /// 0007507 // heart development // inferred from mutant phenotype /// 0007507 // heart development // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0009912 // auditory receptor cell fate commitment // inferred from electronic annotation /// 0010001 // glial cell differentiation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0010718 // positive regulation of epithelial to mesenchymal transition // inferred from mutant phenotype /// 0010812 // negative regulation of cell-substrate adhesion // inferred from direct assay /// 0010832 // negative regulation of myotube differentiation // inferred from sequence or structural similarity /// 0014807 // regulation of somitogenesis // inferred from electronic annotation /// 0021515 // cell differentiation in spinal cord // inferred from electronic annotation /// 0021915 // neural tube development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0030216 // keratinocyte differentiation // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0030326 // embryonic limb morphogenesis // inferred from electronic annotation /// 0030513 // positive regulation of BMP signaling pathway // inferred from sequence or structural similarity /// 0030514 // negative regulation of BMP signaling pathway // inferred from sequence or structural similarity /// 0030900 // forebrain development // inferred from electronic annotation /// 0031069 // hair follicle morphogenesis // inferred from electronic annotation /// 0031100 // organ regeneration // inferred from electronic annotation /// 0031960 // response to corticosteroid stimulus // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0035116 // embryonic hindlimb morphogenesis // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042246 // tissue regeneration // inferred from electronic annotation /// 0042640 // anagen // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043086 // negative regulation of catalytic activity // inferred from sequence or structural similarity /// 0045165 // cell fate commitment // inferred from electronic annotation /// 0045596 // negative regulation of cell differentiation // inferred from electronic annotation /// 0045603 // positive regulation of endothelial cell differentiation // inferred from electronic annotation /// 0045618 // positive regulation of keratinocyte differentiation // inferred from electronic annotation /// 0045662 // negative regulation of myoblast differentiation // inferred from mutant phenotype /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0045668 // negative regulation of osteoblast differentiation // inferred from sequence or structural similarity /// 0045687 // positive regulation of glial cell differentiation // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0045955 // negative regulation of calcium ion-dependent exocytosis // inferred from electronic annotation /// 0046427 // positive regulation of JAK-STAT cascade // inferred from sequence or structural similarity /// 0046533 // negative regulation of photoreceptor cell differentiation // inferred from electronic annotation /// 0048103 // somatic stem cell division // inferred from electronic annotation /// 0048663 // neuron fate commitment // inferred from electronic annotation /// 0048708 // astrocyte differentiation // inferred from electronic annotation /// 0048709 // oligodendrocyte differentiation // inferred from electronic annotation /// 0048711 // positive regulation of astrocyte differentiation // inferred from sequence or structural similarity /// 0048715 // negative regulation of oligodendrocyte differentiation // inferred from sequence or structural similarity /// 0048754 // branching morphogenesis of a tube // inferred from electronic annotation /// 0050678 // regulation of epithelial cell proliferation // inferred from electronic annotation /// 0050679 // positive regulation of epithelial cell proliferation // inferred from electronic annotation /// 0050767 // regulation of neurogenesis // inferred from electronic annotation /// 0050768 // negative regulation of neurogenesis // inferred from sequence or structural similarity /// 0050793 // regulation of developmental process // inferred from electronic annotation /// 0060253 // negative regulation of glial cell proliferation // inferred from sequence or structural similarity /// 0060528 // secretory columnal luminar epithelial cell differentiation involved in prostate glandular acinus development // inferred from electronic annotation /// 0060548 // negative regulation of cell death // inferred from electronic annotation /// 0060740 // prostate gland epithelium morphogenesis // inferred from electronic annotation /// 0060768 // regulation of epithelial cell proliferation involved in prostate gland development // inferred from electronic annotation /// 0061419 // positive regulation of transcription from RNA polymerase II promoter in response to hypoxia // inferred from sequence or structural similarity /// 0072602 // interleukin-4 secretion // inferred from electronic annotation /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from electronic annotation /// 0097150 // neuronal stem cell maintenance // inferred from expression pattern /// 2000737 // negative regulation of stem cell differentiation // inferred from mutant phenotype /// 2000811 // negative regulation of anoikis // inferred from mutant phenotype /// 2000974 // negative regulation of pro-B cell differentiation // inferred from sequence or structural similarity","0000139 // Golgi membrane // traceable author statement /// 0001669 // acrosomal vesicle // inferred from electronic annotation /// 0002193 // MAML1-RBP-Jkappa- ICN1 complex // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0001047 // core promoter binding // inferred from sequence or structural similarity /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0004857 // enzyme inhibitor activity // inferred from sequence or structural similarity /// 0004872 // receptor activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from sequence or structural similarity /// 0031490 // chromatin DNA binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:139388895-139438556 (-) // 97.71 // q34.3"]
["11718446_at",0.05088806,0.043494225,-0.043494225,-0.06182003,0.05694151,-0.14893007,0.7170007,0.36555433,1.0484312,0.068232134,1.0484312,"up","SH3BGRL2",83699.0,"","0005634 // nucleus // inferred from electronic annotation","0017124 // SH3 domain binding // inferred from electronic annotation","chr6:80340821-80413577 (+) // 90.54 // q14.1"]
["11741772_a_at",-0.024971962,-0.04902649,-0.08215809,0.03400421,0.024971962,0.028043747,0.18371373,0.008471417,-1.0577941,-0.08105882,1.0577941,"down","TCEA2",6919.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006354 // transcription elongation, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006414 // translational elongation // inferred from electronic annotation /// 0032784 // regulation of transcription elongation, DNA-dependent // inferred from electronic annotation /// 0032784 // regulation of transcription elongation, DNA-dependent // non-traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0008023 // transcription elongation factor complex // non-traceable author statement","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003746 // translation elongation factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr20:62688438-62703700 (+) // 93.92 // q13.33"]
["11725765_a_at",0.05118704,0.002183199,-0.03236103,-0.09590745,-0.0021829605,0.16337037,0.95467895,0.8619103,-1.0102812,-0.014756913,1.0102812,"down","COL11A1",1301.0,"0001502 // cartilage condensation // inferred from electronic annotation /// 0001503 // ossification // inferred from electronic annotation /// 0002063 // chondrocyte development // inferred from electronic annotation /// 0003007 // heart morphogenesis // inferred from electronic annotation /// 0006029 // proteoglycan metabolic process // inferred from electronic annotation /// 0007601 // visual perception // inferred from mutant phenotype /// 0007605 // sensory perception of sound // inferred from mutant phenotype /// 0030198 // extracellular matrix organization // non-traceable author statement /// 0030199 // collagen fibril organization // non-traceable author statement /// 0030199 // collagen fibril organization // inferred from electronic annotation /// 0042472 // inner ear morphogenesis // inferred from electronic annotation /// 0048704 // embryonic skeletal system morphogenesis // inferred from electronic annotation /// 0048705 // skeletal system morphogenesis // inferred from electronic annotation /// 0050910 // detection of mechanical stimulus involved in sensory perception of sound // inferred from mutant phenotype /// 0051216 // cartilage development // inferred from electronic annotation /// 0055010 // ventricular cardiac muscle tissue morphogenesis // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005581 // collagen // inferred from electronic annotation /// 0005592 // collagen type XI // inferred from direct assay /// 0005592 // collagen type XI // non-traceable author statement /// 0031012 // extracellular matrix // inferred from electronic annotation","0005201 // extracellular matrix structural constituent // non-traceable author statement /// 0005201 // extracellular matrix structural constituent // inferred from electronic annotation /// 0030674 // protein binding, bridging // non-traceable author statement /// 0050840 // extracellular matrix binding // non-traceable author statement","chr1:103342028-103574052 (-) // 99.48 // p21.1"]
["11725498_a_at",0.024004936,-0.18235254,-0.010507107,0.11450291,0.010507107,-0.053367138,0.72305894,0.37520078,-1.0571395,-0.08016579,1.0571395,"down","TMEM117",84216.0,"","0005783 // endoplasmic reticulum // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr12:44229601-44783541 (+) // 97.02 // q12"]
["11757330_x_at",5.8555603E-4,-5.8555603E-4,0.022839546,0.023807526,-0.028802872,-0.002729416,0.8377156,0.58109826,1.0070869,0.010188138,1.0070869,"up","SNRPC",6631.0,"0000387 // spliceosomal snRNP assembly // inferred from direct assay /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005685 // U1 snRNP // inferred from direct assay /// 0005685 // U1 snRNP // inferred from electronic annotation /// 0015030 // Cajal body // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003727 // single-stranded RNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0030619 // U1 snRNA binding // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:34738067-34741571 (+) // 87.81 // p21.31"]
["11721557_a_at",-0.09549618,-0.028153658,0.13939548,0.08436346,-0.119087934,0.028153658,0.98207575,0.93976665,1.0051695,0.0074388166,1.0051695,"up","ABCA8",10351.0,"0006200 // ATP catabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0042626 // ATPase activity, coupled to transmembrane movement of substances // inferred from direct assay","chr17:66851530-66951524 (-) // 98.97 // q24.2"]
["11748819_x_at",-0.006664276,-0.015734673,-0.14689207,0.050584793,0.1175971,0.0066637993,0.47241238,0.10813107,-1.082759,-0.11471219,1.082759,"down","FRMD1",79981.0,"","0005856 // cytoskeleton // inferred from electronic annotation","","chr6:168457668-168468203 (-) // 99.75 // q27"]
["11758369_x_at",-0.2044239,-0.01842308,0.01842308,0.01842308,-0.08492494,0.01842308,0.81685364,0.53610176,-1.0367838,-0.0521151,1.0367838,"down","HLA-DPB1",3115.0,"0002504 // antigen processing and presentation of peptide or polysaccharide antigen via MHC class II // inferred from electronic annotation /// 0006955 // immune response // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0019882 // antigen processing and presentation // inferred from electronic annotation /// 0031295 // T cell costimulation // traceable author statement /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement","0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0042613 // MHC class II protein complex // inferred from electronic annotation","0032395 // MHC class II receptor activity // traceable author statement","chr6:33052721-33054504 (+) // 72.1 // p21.32"]
["11731312_s_at",0.07509041,-0.010131836,-0.13114238,0.042851925,0.010131836,-0.027156353,0.8711224,0.6526405,-1.0214866,-0.030670336,1.0214866,"down","WISP3",8838.0,"0001558 // regulation of cell growth // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005625 // soluble fraction // traceable author statement","0005520 // insulin-like growth factor binding // inferred from electronic annotation /// 0008083 // growth factor activity // inferred from electronic annotation","chr6:112375370-112390889 (+) // 94.96 // q21"]
["11745983_x_at",0.07204914,0.012656689,-0.20000339,-0.012656689,0.08208847,-0.056752205,0.8782479,0.6675913,-1.0300105,-0.042658992,1.0300105,"down","GRIA1",2890.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007268 // synaptic transmission // inferred from electronic annotation /// 0007616 // long-term memory // inferred from electronic annotation /// 0031623 // receptor internalization // inferred from electronic annotation /// 0035235 // ionotropic glutamate receptor signaling pathway // inferred from electronic annotation","0005624 // membrane fraction // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from sequence or structural similarity /// 0014069 // postsynaptic density // inferred from sequence or structural similarity /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0019717 // synaptosome // inferred from sequence or structural similarity /// 0030054 // cell junction // inferred from electronic annotation /// 0030288 // outer membrane-bounded periplasmic space // inferred from electronic annotation /// 0030425 // dendrite // inferred from sequence or structural similarity /// 0030425 // dendrite // inferred from electronic annotation /// 0030666 // endocytic vesicle membrane // traceable author statement /// 0032281 // alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective glutamate receptor complex // inferred from sequence or structural similarity /// 0032281 // alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective glutamate receptor complex // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from sequence or structural similarity /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from sequence or structural similarity /// 0043197 // dendritic spine // inferred from electronic annotation /// 0044309 // neuron spine // inferred from sequence or structural similarity /// 0044309 // neuron spine // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004970 // ionotropic glutamate receptor activity // inferred from electronic annotation /// 0004971 // alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor activity // inferred from direct assay /// 0005215 // transporter activity // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005234 // extracellular-glutamate-gated ion channel activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008066 // glutamate receptor activity // traceable author statement /// 0015277 // kainate selective glutamate receptor activity // traceable author statement /// 0030165 // PDZ domain binding // inferred from sequence or structural similarity","chr5:152870220-153193239 (+) // 99.04 // q33.2"]
["11716711_a_at",-0.04052353,-0.08374977,0.0277462,0.08012104,0.10278511,-0.0277462,0.5651326,0.1800942,-1.0598762,-0.083895765,1.0598762,"down","TCEAL8",90843.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","","chrX:102507922-102510097 (-) // 53.79 // q22.1"]
["11742803_at",0.09718895,0.017476559,-0.13051176,-0.017476559,0.023763657,-0.044549465,0.97484225,0.9196786,1.0051926,0.0074720094,1.0051926,"up","SRD5A1",6715.0,"0001655 // urogenital system development // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006694 // steroid biosynthetic process // inferred from electronic annotation /// 0006702 // androgen biosynthetic process // traceable author statement /// 0006702 // androgen biosynthetic process // inferred from electronic annotation /// 0007530 // sex determination // non-traceable author statement /// 0007548 // sex differentiation // inferred from electronic annotation /// 0008202 // steroid metabolic process // traceable author statement /// 0008202 // steroid metabolic process // inferred from electronic annotation /// 0008209 // androgen metabolic process // inferred from electronic annotation /// 0008584 // male gonad development // inferred from electronic annotation /// 0009267 // cellular response to starvation // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0014850 // response to muscle activity // inferred from electronic annotation /// 0016101 // diterpenoid metabolic process // inferred from electronic annotation /// 0021510 // spinal cord development // inferred from electronic annotation /// 0021766 // hippocampus development // inferred from electronic annotation /// 0021794 // thalamus development // inferred from electronic annotation /// 0021854 // hypothalamus development // inferred from electronic annotation /// 0021983 // pituitary gland development // inferred from electronic annotation /// 0021987 // cerebral cortex development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030539 // male genitalia development // inferred from electronic annotation /// 0030540 // female genitalia development // inferred from electronic annotation /// 0032354 // response to follicle-stimulating hormone stimulus // inferred from electronic annotation /// 0032355 // response to estradiol stimulus // inferred from electronic annotation /// 0032869 // cellular response to insulin stimulus // inferred from electronic annotation /// 0033574 // response to testosterone stimulus // inferred from electronic annotation /// 0042428 // serotonin metabolic process // inferred from electronic annotation /// 0042448 // progesterone metabolic process // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042747 // circadian sleep/wake cycle, REM sleep // inferred from electronic annotation /// 0043627 // response to estrogen stimulus // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0060348 // bone development // inferred from electronic annotation /// 0060416 // response to growth hormone stimulus // inferred from electronic annotation /// 0060992 // response to fungicide // inferred from electronic annotation /// 0071320 // cellular response to cAMP // inferred from electronic annotation /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation /// 0071392 // cellular response to estradiol stimulus // inferred from electronic annotation /// 0071394 // cellular response to testosterone stimulus // inferred from electronic annotation /// 0071407 // cellular response to organic cyclic compound // inferred from electronic annotation /// 0071549 // cellular response to dexamethasone stimulus // inferred from electronic annotation /// 0071872 // cellular response to epinephrine stimulus // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043209 // myelin sheath // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0070852 // cell body fiber // inferred from electronic annotation","0003865 // 3-oxo-5-alpha-steroid 4-dehydrogenase activity // inferred from direct assay /// 0003865 // 3-oxo-5-alpha-steroid 4-dehydrogenase activity // inferred from electronic annotation /// 0009055 // electron carrier activity // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016627 // oxidoreductase activity, acting on the CH-CH group of donors // inferred from electronic annotation /// 0033218 // amide binding // inferred from electronic annotation /// 0050213 // progesterone 5-alpha-reductase activity // inferred from electronic annotation /// 0070402 // NADPH binding // inferred from electronic annotation","chr5:6633433-6669673 (+) // 90.23 // p15.31"]
["11735979_at",-0.09635854,-0.014496803,0.17994428,0.014496565,0.24083638,-0.069009304,0.9209821,0.76771677,-1.0274571,-0.039078183,1.0274571,"down","OR52N4",390072.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr11:5775922-5776959 (+) // 99.71 // p15.4"]
["11723455_a_at",-0.1313572,-0.024929523,0.20516157,-0.0623765,0.16396856,0.024929523,0.9470502,0.8387131,-1.018102,-0.025882177,1.018102,"down","PI16",221476.0,"0006508 // proteolysis // inferred from electronic annotation /// 0010466 // negative regulation of peptidase activity // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008233 // peptidase activity // inferred from electronic annotation /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation","chr6:36922208-36932613 (+) // 92.37 // p21.2"]
["11740933_a_at",0.03897667,0.10961723,0.106800556,-0.13871145,-0.03897667,-0.10931873,0.18460888,0.00854099,1.1335126,0.18080045,1.1335126,"up","FOXA2",3170.0,"0000432 // positive regulation of transcription from RNA polymerase II promoter by glucose // inferred from sequence or structural similarity /// 0000432 // positive regulation of transcription from RNA polymerase II promoter by glucose // inferred from electronic annotation /// 0000433 // negative regulation of transcription from RNA polymerase II promoter by glucose // inferred from sequence or structural similarity /// 0000433 // negative regulation of transcription from RNA polymerase II promoter by glucose // inferred from electronic annotation /// 0001701 // in utero embryonic development // not recorded /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001705 // ectoderm formation // not recorded /// 0001705 // ectoderm formation // inferred from electronic annotation /// 0001708 // cell fate specification // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007389 // pattern specification process // inferred from electronic annotation /// 0007492 // endoderm development // not recorded /// 0008344 // adult locomotory behavior // inferred from electronic annotation /// 0009653 // anatomical structure morphogenesis // inferred from electronic annotation /// 0009952 // anterior/posterior pattern specification // not recorded /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0009953 // dorsal/ventral pattern formation // inferred from electronic annotation /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0010719 // negative regulation of epithelial to mesenchymal transition // inferred from mutant phenotype /// 0016568 // chromatin modification // inferred from electronic annotation /// 0021533 // cell differentiation in hindbrain // not recorded /// 0021533 // cell differentiation in hindbrain // inferred from electronic annotation /// 0021779 // oligodendrocyte cell fate commitment // not recorded /// 0021904 // dorsal/ventral neural tube patterning // not recorded /// 0021904 // dorsal/ventral neural tube patterning // inferred from electronic annotation /// 0023019 // signal transduction involved in regulation of gene expression // inferred from electronic annotation /// 0030193 // regulation of blood coagulation // inferred from direct assay /// 0030324 // lung development // inferred from electronic annotation /// 0031018 // endocrine pancreas development // not recorded /// 0031018 // endocrine pancreas development // inferred from direct assay /// 0031018 // endocrine pancreas development // inferred from electronic annotation /// 0032289 // central nervous system myelin formation // not recorded /// 0032525 // somite rostral/caudal axis specification // inferred from electronic annotation /// 0032868 // response to insulin stimulus // inferred from electronic annotation /// 0033132 // negative regulation of glucokinase activity // inferred from sequence or structural similarity /// 0033132 // negative regulation of glucokinase activity // inferred from electronic annotation /// 0040019 // positive regulation of embryonic development // inferred from sequence or structural similarity /// 0040019 // positive regulation of embryonic development // inferred from electronic annotation /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // inferred from mutant phenotype /// 0045665 // negative regulation of neuron differentiation // not recorded /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // not recorded /// 0045666 // positive regulation of neuron differentiation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0045945 // positive regulation of transcription from RNA polymerase III promoter // inferred from electronic annotation /// 0048468 // cell development // inferred from electronic annotation /// 0048646 // anatomical structure formation involved in morphogenesis // inferred from electronic annotation /// 0048665 // neuron fate specification // not recorded /// 0048665 // neuron fate specification // inferred from electronic annotation /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // not recorded /// 0060441 // epithelial tube branching involved in lung morphogenesis // not recorded /// 0060441 // epithelial tube branching involved in lung morphogenesis // inferred from electronic annotation /// 0060487 // lung epithelial cell differentiation // not recorded /// 0060487 // lung epithelial cell differentiation // inferred from electronic annotation /// 0061178 // regulation of insulin secretion involved in cellular response to glucose stimulus // inferred from sequence or structural similarity /// 0061178 // regulation of insulin secretion involved in cellular response to glucose stimulus // inferred from electronic annotation /// 0070741 // response to interleukin-6 // traceable author statement /// 0071542 // dopaminergic neuron differentiation // inferred from electronic annotation /// 0090009 // primitive streak formation // inferred from sequence or structural similarity /// 0090009 // primitive streak formation // inferred from electronic annotation /// 2000049 // positive regulation of cell-cell adhesion mediated by cadherin // inferred by curator /// 2000543 // positive regulation of gastrulation // inferred from sequence or structural similarity /// 2000543 // positive regulation of gastrulation // inferred from electronic annotation /// 2000971 // negative regulation of detection of glucose // inferred from sequence or structural similarity /// 2000971 // negative regulation of detection of glucose // inferred from electronic annotation /// 2000976 // regulation of transcription from RNA polymerase II promoter involved in detection of glucose // inferred from sequence or structural similarity /// 2000976 // regulation of transcription from RNA polymerase II promoter involved in detection of glucose // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // not recorded /// 0005737 // cytoplasm // inferred from electronic annotation /// 0044464 // cell part // inferred from electronic annotation","0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // not recorded /// 0003690 // double-stranded DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // not recorded /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008134 // transcription factor binding // not recorded /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0008301 // DNA binding, bending // not recorded /// 0019904 // protein domain specific binding // not recorded /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from mutant phenotype /// 0046332 // SMAD binding // inferred from electronic annotation","chr20:22561642-22566099 (-) // 94.42 // p11.21"]
["11730917_at",-8.802414E-4,0.005063057,-0.24060822,8.802414E-4,-0.05640459,0.04712963,0.75813204,0.42809033,-1.0540988,-0.07601015,1.0540988,"down","TAF6L",10629.0,"0006338 // chromatin remodeling // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006352 // transcription initiation, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0043966 // histone H3 acetylation // inferred from direct assay /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // inferred from electronic annotation","0000118 // histone deacetylase complex // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0030914 // STAGA complex // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0004402 // histone acetyltransferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction","chr11:62538774-62554814 (+) // 94.94 // q12.3"]
["11760645_at",-0.031190395,0.031190395,-0.13561964,0.031190395,-0.07619095,0.04968071,0.79556155,0.4959717,-1.0329473,-0.046766654,1.0329473,"down","GABRB1",2560.0,"0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006821 // chloride transport // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0034220 // ion transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0034707 // chloride channel complex // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004890 // GABA-A receptor activity // inferred from electronic annotation /// 0004890 // GABA-A receptor activity // traceable author statement /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005230 // extracellular ligand-gated ion channel activity // inferred from electronic annotation /// 0005254 // chloride channel activity // inferred from electronic annotation","chr4:47033401-47035887 (+) // 99.95 // p12"]
["11724829_at",-0.029263973,0.029263973,-0.031117916,0.15851164,-0.060970783,0.07385492,0.72027576,0.3701219,-1.0479026,-0.06750461,1.0479026,"down","STS",412.0,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0006665 // sphingolipid metabolic process // traceable author statement /// 0006687 // glycosphingolipid metabolic process // traceable author statement /// 0006706 // steroid catabolic process // traceable author statement /// 0007565 // female pregnancy // inferred from electronic annotation /// 0007611 // learning or memory // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008202 // steroid metabolic process // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008544 // epidermis development // traceable author statement /// 0009268 // response to pH // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0043434 // response to peptide hormone stimulus // inferred from electronic annotation /// 0043588 // skin development // inferred from electronic annotation /// 0043627 // response to estrogen stimulus // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement","0000299 // integral to membrane of membrane fraction // inferred from electronic annotation /// 0005624 // membrane fraction // traceable author statement /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005764 // lysosome // traceable author statement /// 0005768 // endosome // traceable author statement /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005792 // microsome // traceable author statement /// 0005794 // Golgi apparatus // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004773 // steryl-sulfatase activity // traceable author statement /// 0004773 // steryl-sulfatase activity // inferred from electronic annotation /// 0008484 // sulfuric ester hydrolase activity // inferred from direct assay /// 0008484 // sulfuric ester hydrolase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chrX:7137366-7272851 (+) // 87.9 // p22.31"]
["11722864_at",-0.03282833,-0.0029797554,0.19911575,0.0029797554,-0.060002327,0.12433529,0.909941,0.74215597,1.0224273,0.03199829,1.0224273,"up","NETO2",81831.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation","chr16:47115430-47177911 (-) // 93.71 // q12.1"]
["11729108_a_at",0.010093212,-0.02871561,-0.14256334,0.1786871,-0.010093212,0.10515642,0.4801549,0.112620525,-1.1057143,-0.14497869,1.1057143,"down","MBP",4155.0,"0006955 // immune response // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007417 // central nervous system development // traceable author statement /// 0008366 // axon ensheathment // traceable author statement /// 0009636 // response to toxin // inferred from electronic annotation /// 0042552 // myelination // inferred from electronic annotation /// 0050771 // negative regulation of axonogenesis // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0033269 // internode region of axon // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043209 // myelin sheath // inferred from electronic annotation /// 0043218 // compact myelin // inferred from electronic annotation","0002020 // protease binding // inferred from electronic annotation /// 0019911 // structural constituent of myelin sheath // inferred from electronic annotation","chr18:74690789-74844774 (-) // 98.75 // q23"]
["11751331_a_at",-0.063987255,-0.21249771,0.20161724,-0.16766071,0.063987255,0.121248245,0.9498637,0.8471762,-1.0215884,-0.030814111,1.0215884,"down","DEPTOR",64798.0,"0006469 // negative regulation of protein kinase activity // inferred from mutant phenotype /// 0032007 // negative regulation of TOR signaling cascade // inferred from mutant phenotype /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from mutant phenotype /// 0045792 // negative regulation of cell size // inferred from mutant phenotype","0005622 // intracellular // inferred from direct assay /// 0005622 // intracellular // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr8:120885961-121062283 (+) // 94.9 // q24.12"]
["11732785_a_at",-0.019769669,-0.06802368,0.09360409,0.0069437027,-0.0030441284,0.0030441284,0.9980961,0.9940982,-1.0002618,-3.7762447E-4,1.0002618,"down","C16orf45",89927.0,"","","","chr16:15596062-15682115 (+) // 86.27 // p13.11"]
["11758964_x_at",0.052989006,-0.02159977,0.17503452,-0.009850502,-0.022864342,0.009850502,0.6379439,0.25865173,1.0544052,0.076429404,1.0544052,"up","PAFAH1B2",5049.0,"0006629 // lipid metabolic process // traceable author statement /// 0016042 // lipid catabolic process // inferred from electronic annotation /// 0016239 // positive regulation of macroautophagy // inferred from mutant phenotype","0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation","0003847 // 1-alkyl-2-acetylglycerophosphocholine esterase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr11:117014991-117041759 (+) // 90.13 // q23.3"]
["11743793_a_at",0.13931799,-0.15267324,0.00931263,-0.1563077,0.05719757,-0.00931263,0.9164977,0.7579127,1.0244101,0.03479342,1.0244101,"up","ZNF280B",140883.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr22:22838773-22863505 (-) // 87.7 // q11.22"]
["11753073_a_at",-0.024273396,-0.10390258,0.13402891,-0.018982172,0.018982172,0.106016874,0.8890852,0.6946906,-1.0234127,-0.03338805,1.0234127,"down","TNFSF4",7292.0,"0001816 // cytokine production // inferred from electronic annotation /// 0002215 // defense response to nematode // inferred from sequence or structural similarity /// 0002215 // defense response to nematode // inferred from electronic annotation /// 0002526 // acute inflammatory response // inferred from sequence or structural similarity /// 0002526 // acute inflammatory response // inferred from electronic annotation /// 0002726 // positive regulation of T cell cytokine production // inferred from sequence or structural similarity /// 0002726 // positive regulation of T cell cytokine production // inferred from electronic annotation /// 0002819 // regulation of adaptive immune response // inferred from sequence or structural similarity /// 0002819 // regulation of adaptive immune response // inferred from electronic annotation /// 0002830 // positive regulation of type 2 immune response // inferred from sequence or structural similarity /// 0002830 // positive regulation of type 2 immune response // inferred from electronic annotation /// 0002891 // positive regulation of immunoglobulin mediated immune response // inferred from sequence or structural similarity /// 0002891 // positive regulation of immunoglobulin mediated immune response // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from electronic annotation /// 0006955 // immune response // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0008203 // cholesterol metabolic process // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0009615 // response to virus // inferred from sequence or structural similarity /// 0009615 // response to virus // inferred from electronic annotation /// 0032689 // negative regulation of interferon-gamma production // inferred from sequence or structural similarity /// 0032689 // negative regulation of interferon-gamma production // inferred from electronic annotation /// 0032700 // negative regulation of interleukin-17 production // inferred from direct assay /// 0032729 // positive regulation of interferon-gamma production // inferred from direct assay /// 0032729 // positive regulation of interferon-gamma production // inferred from electronic annotation /// 0032733 // positive regulation of interleukin-10 production // inferred from sequence or structural similarity /// 0032733 // positive regulation of interleukin-10 production // inferred from electronic annotation /// 0032735 // positive regulation of interleukin-12 production // inferred from sequence or structural similarity /// 0032735 // positive regulation of interleukin-12 production // inferred from electronic annotation /// 0032736 // positive regulation of interleukin-13 production // inferred from sequence or structural similarity /// 0032736 // positive regulation of interleukin-13 production // inferred from electronic annotation /// 0032743 // positive regulation of interleukin-2 production // inferred from electronic annotation /// 0032753 // positive regulation of interleukin-4 production // inferred from direct assay /// 0032753 // positive regulation of interleukin-4 production // inferred from electronic annotation /// 0032755 // positive regulation of interleukin-6 production // inferred from direct assay /// 0032755 // positive regulation of interleukin-6 production // inferred from electronic annotation /// 0035708 // interleukin-4-dependent isotype switching to IgE isotypes // inferred from sequence or structural similarity /// 0035708 // interleukin-4-dependent isotype switching to IgE isotypes // inferred from electronic annotation /// 0035709 // memory T cell activation // inferred from sequence or structural similarity /// 0035709 // memory T cell activation // inferred from electronic annotation /// 0035712 // T-helper 2 cell activation // inferred from sequence or structural similarity /// 0035712 // T-helper 2 cell activation // inferred from electronic annotation /// 0042098 // T cell proliferation // inferred from electronic annotation /// 0042104 // positive regulation of activated T cell proliferation // inferred from electronic annotation /// 0042221 // response to chemical stimulus // inferred from sequence or structural similarity /// 0042221 // response to chemical stimulus // inferred from electronic annotation /// 0043372 // positive regulation of CD4-positive, alpha-beta T cell differentiation // inferred from sequence or structural similarity /// 0043372 // positive regulation of CD4-positive, alpha-beta T cell differentiation // inferred from electronic annotation /// 0043382 // positive regulation of memory T cell differentiation // inferred from sequence or structural similarity /// 0043382 // positive regulation of memory T cell differentiation // inferred from electronic annotation /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // inferred from sequence or structural similarity /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0045590 // negative regulation of regulatory T cell differentiation // inferred from sequence or structural similarity /// 0045590 // negative regulation of regulatory T cell differentiation // inferred from electronic annotation /// 0045626 // negative regulation of T-helper 1 cell differentiation // inferred from sequence or structural similarity /// 0045626 // negative regulation of T-helper 1 cell differentiation // inferred from electronic annotation /// 0045630 // positive regulation of T-helper 2 cell differentiation // inferred from sequence or structural similarity /// 0045630 // positive regulation of T-helper 2 cell differentiation // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0046641 // positive regulation of alpha-beta T cell proliferation // inferred from sequence or structural similarity /// 0046641 // positive regulation of alpha-beta T cell proliferation // inferred from electronic annotation /// 0050710 // negative regulation of cytokine secretion // inferred from electronic annotation /// 0050727 // regulation of inflammatory response // inferred from sequence or structural similarity /// 0050727 // regulation of inflammatory response // inferred from electronic annotation /// 0050729 // positive regulation of inflammatory response // inferred from direct assay /// 0050871 // positive regulation of B cell activation // inferred from sequence or structural similarity /// 0050871 // positive regulation of B cell activation // inferred from electronic annotation /// 0051024 // positive regulation of immunoglobulin secretion // inferred from sequence or structural similarity /// 0051024 // positive regulation of immunoglobulin secretion // inferred from electronic annotation /// 0071222 // cellular response to lipopolysaccharide // inferred from direct assay /// 0071380 // cellular response to prostaglandin E stimulus // inferred from direct assay /// 0071954 // chemokine (C-C motif) ligand 11 production // inferred from sequence or structural similarity /// 0071954 // chemokine (C-C motif) ligand 11 production // inferred from electronic annotation /// 1900281 // positive regulation of CD4-positive, alpha beta T cell costimulation // inferred from sequence or structural similarity /// 2000525 // positive regulation of T cell costimulation // inferred from electronic annotation","0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005102 // receptor binding // traceable author statement /// 0005125 // cytokine activity // inferred from electronic annotation /// 0005164 // tumor necrosis factor receptor binding // inferred from electronic annotation /// 0032813 // tumor necrosis factor receptor superfamily binding // inferred from sequence or structural similarity /// 0032813 // tumor necrosis factor receptor superfamily binding // inferred from electronic annotation","chr1:173154837-173174612 (-) // 92.58 // q25.1"]
["11719718_a_at",0.13108015,0.026210785,-0.3040483,0.20616126,-0.09185958,-0.026210546,0.86968225,0.64878875,-1.0557606,-0.07828276,1.0557606,"down","SYK",6850.0,"0000187 // activation of MAPK activity // inferred from electronic annotation /// 0001525 // angiogenesis // inferred from electronic annotation /// 0001820 // serotonin secretion // inferred from electronic annotation /// 0001945 // lymph vessel development // inferred from sequence or structural similarity /// 0001945 // lymph vessel development // inferred from electronic annotation /// 0002250 // adaptive immune response // inferred from sequence or structural similarity /// 0002281 // macrophage activation involved in immune response // inferred from sequence or structural similarity /// 0002281 // macrophage activation involved in immune response // inferred from electronic annotation /// 0002283 // neutrophil activation involved in immune response // inferred from sequence or structural similarity /// 0002283 // neutrophil activation involved in immune response // inferred from electronic annotation /// 0002366 // leukocyte activation involved in immune response // inferred from sequence or structural similarity /// 0002366 // leukocyte activation involved in immune response // inferred from electronic annotation /// 0002554 // serotonin secretion by platelet // inferred from sequence or structural similarity /// 0002554 // serotonin secretion by platelet // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from sequence or structural similarity /// 0006468 // protein phosphorylation // non-traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007159 // leukocyte cell-cell adhesion // inferred from direct assay /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007167 // enzyme linked receptor protein signaling pathway // inferred from electronic annotation /// 0007229 // integrin-mediated signaling pathway // inferred from sequence or structural similarity /// 0007229 // integrin-mediated signaling pathway // non-traceable author statement /// 0007229 // integrin-mediated signaling pathway // inferred from electronic annotation /// 0007257 // activation of JUN kinase activity // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0009887 // organ morphogenesis // traceable author statement /// 0010543 // regulation of platelet activation // inferred from sequence or structural similarity /// 0010543 // regulation of platelet activation // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0019370 // leukotriene biosynthetic process // inferred from electronic annotation /// 0023014 // signal transduction by phosphorylation // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0030593 // neutrophil chemotaxis // inferred from direct assay /// 0032928 // regulation of superoxide anion generation // inferred from sequence or structural similarity /// 0032928 // regulation of superoxide anion generation // inferred from electronic annotation /// 0033630 // positive regulation of cell adhesion mediated by integrin // inferred from sequence or structural similarity /// 0033630 // positive regulation of cell adhesion mediated by integrin // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0042742 // defense response to bacterium // inferred from sequence or structural similarity /// 0042742 // defense response to bacterium // inferred from electronic annotation /// 0043306 // positive regulation of mast cell degranulation // inferred from electronic annotation /// 0043313 // regulation of neutrophil degranulation // inferred from sequence or structural similarity /// 0043313 // regulation of neutrophil degranulation // inferred from electronic annotation /// 0043366 // beta selection // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045087 // innate immune response // inferred from sequence or structural similarity /// 0045087 // innate immune response // inferred from electronic annotation /// 0045401 // positive regulation of interleukin-3 biosynthetic process // inferred from electronic annotation /// 0045425 // positive regulation of granulocyte macrophage colony-stimulating factor biosynthetic process // inferred from electronic annotation /// 0045579 // positive regulation of B cell differentiation // inferred from electronic annotation /// 0045588 // positive regulation of gamma-delta T cell differentiation // inferred from electronic annotation /// 0045780 // positive regulation of bone resorption // inferred from sequence or structural similarity /// 0045780 // positive regulation of bone resorption // inferred from electronic annotation /// 0046638 // positive regulation of alpha-beta T cell differentiation // inferred from electronic annotation /// 0046641 // positive regulation of alpha-beta T cell proliferation // inferred from electronic annotation /// 0046777 // protein autophosphorylation // inferred from electronic annotation /// 0048514 // blood vessel morphogenesis // inferred from sequence or structural similarity /// 0048514 // blood vessel morphogenesis // inferred from electronic annotation /// 0050715 // positive regulation of cytokine secretion // inferred from electronic annotation /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0050764 // regulation of phagocytosis // inferred from sequence or structural similarity /// 0050764 // regulation of phagocytosis // inferred from electronic annotation /// 0050776 // regulation of immune response // inferred from electronic annotation /// 0050850 // positive regulation of calcium-mediated signaling // inferred from electronic annotation /// 0050853 // B cell receptor signaling pathway // inferred from sequence or structural similarity /// 0050853 // B cell receptor signaling pathway // inferred from electronic annotation /// 0070372 // regulation of ERK1 and ERK2 cascade // inferred from sequence or structural similarity /// 0070372 // regulation of ERK1 and ERK2 cascade // inferred from electronic annotation /// 0071226 // cellular response to molecule of fungal origin // inferred from sequence or structural similarity /// 0071226 // cellular response to molecule of fungal origin // inferred from electronic annotation /// 0090237 // regulation of arachidonic acid secretion // inferred from sequence or structural similarity /// 0090237 // regulation of arachidonic acid secretion // inferred from electronic annotation /// 0090330 // regulation of platelet aggregation // inferred from sequence or structural similarity /// 0090330 // regulation of platelet aggregation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred by curator /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0019815 // B cell receptor complex // inferred from electronic annotation /// 0032009 // early phagosome // inferred from sequence or structural similarity /// 0032009 // early phagosome // inferred from electronic annotation /// 0042101 // T cell receptor complex // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // non-traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004715 // non-membrane spanning protein tyrosine kinase activity // inferred from direct assay /// 0004715 // non-membrane spanning protein tyrosine kinase activity // traceable author statement /// 0004715 // non-membrane spanning protein tyrosine kinase activity // inferred from electronic annotation /// 0004716 // receptor signaling protein tyrosine kinase activity // inferred from electronic annotation /// 0005178 // integrin binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation","chr9:93563911-93660831 (+) // 92.48 // q22.2"]
["11753335_a_at",0.047798157,0.00835228,0.041226864,-0.022050858,-0.06926012,-0.00835228,0.33669466,0.041165452,1.0465783,0.065680236,1.0465783,"up","TMEM177",80775.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr2:120436745-120439522 (+) // 93.72 // q14.2"]
["11739664_at",0.09131336,-8.125305E-4,0.037965775,-0.05253601,8.125305E-4,-0.008371353,0.4853473,0.11566977,1.0445299,0.06285381,1.0445299,"up","RIMS3",9783.0,"0006810 // transport // inferred from electronic annotation /// 0006836 // neurotransmitter transport // inferred from electronic annotation /// 0006887 // exocytosis // inferred from electronic annotation /// 0017156 // calcium ion-dependent exocytosis // inferred from electronic annotation","0030054 // cell junction // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","","chr1:41085510-41131384 (-) // 95.93 // p34.2"]
["11763924_at",0.0080394745,-0.12262726,-0.19058561,0.05474043,0.3835802,-0.0080394745,0.522257,0.14287707,-1.1852173,-0.24515153,1.1852173,"down","SNORD9",692053.0,"","","","chr14:21860300-21860550 (-) // 99.37 // q11.2"]
["11747904_a_at",-0.091741085,0.048288345,-0.04987812,-0.03269863,0.03269863,0.033412933,0.7517327,0.41890505,-1.0297171,-0.042248014,1.0297171,"down","PIP5K1C",23396.0,"0006887 // exocytosis // inferred from electronic annotation /// 0006897 // endocytosis // inferred from electronic annotation /// 0006909 // phagocytosis // traceable author statement /// 0006909 // phagocytosis // inferred from electronic annotation /// 0006935 // chemotaxis // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007409 // axonogenesis // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0016079 // synaptic vesicle exocytosis // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016337 // cell-cell adhesion // traceable author statement /// 0030036 // actin cytoskeleton organization // traceable author statement /// 0030593 // neutrophil chemotaxis // traceable author statement /// 0034333 // adherens junction assembly // traceable author statement /// 0046488 // phosphatidylinositol metabolic process // inferred from electronic annotation /// 0046854 // phosphatidylinositol phosphorylation // inferred from electronic annotation /// 0048488 // synaptic vesicle endocytosis // traceable author statement /// 0072583 // clathrin-mediated endocytosis // traceable author statement","0001891 // phagocytic cup // inferred from electronic annotation /// 0001931 // uropod // traceable author statement /// 0001931 // uropod // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005912 // adherens junction // inferred from electronic annotation /// 0005925 // focal adhesion // traceable author statement /// 0005925 // focal adhesion // inferred from electronic annotation /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016307 // phosphatidylinositol phosphate kinase activity // inferred from electronic annotation /// 0016308 // 1-phosphatidylinositol-4-phosphate 5-kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr19:3632873-3700477 (-) // 98.48 // p13.3"]
["11736814_at",0.06327748,-0.22043872,-0.035782576,0.035782576,-0.035782576,0.24978137,0.6585134,0.28429472,-1.1077061,-0.14757511,1.1077061,"down","GIPC2",54810.0,"","0005737 // cytoplasm // inferred from electronic annotation","","chr1:78511558-78603111 (+) // 98.37 // p31.1"]
["11756574_x_at",-4.4631958E-4,4.4631958E-4,0.04241848,-0.016792297,-0.03217697,0.012036324,0.6231948,0.23998792,1.0185032,0.026450498,1.0185032,"up","RNF167",26001.0,"0000209 // protein polyubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0045786 // negative regulation of cell cycle // inferred from mutant phenotype","0005737 // cytoplasm // inferred from direct assay /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:4843360-4848467 (+) // 99.52 // p13.2"]
["11730586_at",0.014213085,-0.18770552,-0.003428936,0.0515275,0.0034291744,-0.060630083,0.78523046,0.47385278,-1.0403599,-0.057082634,1.0403599,"down","GATA5",140628.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0060575 // intestinal epithelial cell differentiation // inferred from direct assay /// 0071773 // cellular response to BMP stimulus // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0001158 // enhancer sequence-specific DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr20:61038552-61051026 (-) // 92.92 // q13.33"]
["11732193_a_at",0.07715273,0.050981045,0.005648613,-0.11919117,-0.020808697,-0.005648613,0.43653503,0.08696036,1.066692,0.09314366,1.066692,"up","MLF1",4291.0,"0002318 // myeloid progenitor cell differentiation // inferred from sequence or structural similarity /// 0006351 // transcription, DNA-dependent // inferred from sequence or structural similarity /// 0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from direct assay /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation","0003677 // DNA binding // inferred from sequence or structural similarity /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from direct assay","chr3:158288869-158324252 (+) // 98.31 // q25.32"]
["11752695_a_at",0.03284931,-0.13880968,0.13205433,-0.05274415,-0.032849073,0.077674866,0.9694976,0.9046878,1.0078895,0.011337491,1.0078895,"up","SASH3",54440.0,"0002639 // positive regulation of immunoglobulin production // inferred from electronic annotation /// 0002726 // positive regulation of T cell cytokine production // inferred from electronic annotation /// 0002821 // positive regulation of adaptive immune response // inferred from electronic annotation /// 0030890 // positive regulation of B cell proliferation // inferred from electronic annotation /// 0032729 // positive regulation of interferon-gamma production // inferred from electronic annotation /// 0032733 // positive regulation of interleukin-10 production // inferred from electronic annotation /// 0032743 // positive regulation of interleukin-2 production // inferred from electronic annotation /// 0032753 // positive regulation of interleukin-4 production // inferred from electronic annotation /// 0032760 // positive regulation of tumor necrosis factor production // inferred from electronic annotation /// 0042102 // positive regulation of T cell proliferation // inferred from electronic annotation /// 0043372 // positive regulation of CD4-positive, alpha-beta T cell differentiation // inferred from electronic annotation /// 0046622 // positive regulation of organ growth // inferred from electronic annotation /// 0048873 // homeostasis of number of cells within a tissue // inferred from electronic annotation /// 0051251 // positive regulation of lymphocyte activation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","","chrX:128913893-128928745 (+) // 97.75 // q26.1"]
["11744749_a_at",-0.02574253,0.026272774,0.09754944,-0.047838688,0.02574253,-0.092951775,0.6122751,0.2263664,1.0504755,0.071042486,1.0504755,"up","DNAJC11",55735.0,"0006457 // protein folding // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation","0031072 // heat shock protein binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // inferred from electronic annotation","chr1:6694603-6761876 (-) // 96.26 // p36.31"]
["11733370_a_at",-0.08616257,-0.112210274,-0.002193451,0.002193451,0.0045289993,0.075992584,0.4297204,0.08311948,-1.0676414,-0.09442712,1.0676414,"down","PSME1",5720.0,"0000075 // cell cycle checkpoint // traceable author statement /// 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000084 // S phase of mitotic cell cycle // traceable author statement /// 0000209 // protein polyubiquitination // traceable author statement /// 0000216 // M/G1 transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0010950 // positive regulation of endopeptidase activity // inferred from electronic annotation /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019884 // antigen processing and presentation of exogenous antigen // inferred from electronic annotation /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement","0000502 // proteasome complex // traceable author statement /// 0000502 // proteasome complex // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0008537 // proteasome activator complex // inferred from electronic annotation","0061133 // endopeptidase activator activity // inferred from electronic annotation","chr14:24605377-24608173 (+) // 98.02 // q12"]
["11727559_at",-0.04552269,0.049098015,0.0970602,-0.041621685,0.041621685,-0.06026745,0.71570444,0.36311576,1.0378761,0.053634267,1.0378761,"up","FKBP7",51661.0,"0000413 // protein peptidyl-prolyl isomerization // not recorded /// 0000413 // protein peptidyl-prolyl isomerization // inferred from electronic annotation /// 0006457 // protein folding // inferred from electronic annotation /// 0018208 // peptidyl-proline modification // not recorded","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // inferred from electronic annotation /// 0016020 // membrane // not recorded","0003755 // peptidyl-prolyl cis-trans isomerase activity // not recorded /// 0003755 // peptidyl-prolyl cis-trans isomerase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005528 // FK506 binding // not recorded /// 0016853 // isomerase activity // inferred from electronic annotation","chr2:179328314-179343356 (-) // 86.67 // q31.2"]
["11719821_a_at",-0.053516388,-0.11221266,-0.02266407,0.06774378,0.022663593,0.07170057,0.25187144,0.018834764,-1.0843524,-0.11683366,1.0843524,"down","CLN5",1203.0,"0006465 // signal peptide processing // inferred from direct assay /// 0007040 // lysosome organization // inferred from electronic annotation /// 0007042 // lysosomal lumen acidification // inferred from mutant phenotype /// 0007420 // brain development // inferred from expression pattern /// 0007601 // visual perception // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0022008 // neurogenesis // inferred from expression pattern /// 0030163 // protein catabolic process // non-traceable author statement /// 0042551 // neuron maturation // non-traceable author statement /// 0070085 // glycosylation // inferred from direct assay","0005764 // lysosome // inferred from direct assay /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005775 // vacuolar lumen // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // non-traceable author statement /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0005537 // mannose binding // inferred from direct assay","chr13:77564794-77576651 (+) // 86.05 // q22.3"]
["11753677_a_at",0.01050806,-0.13048077,-0.09982157,0.014012337,-0.01050806,0.10323,0.489821,0.11903656,-1.078363,-0.10884282,1.078363,"down","WNT5A",7474.0,"0000187 // activation of MAPK activity // inferred from direct assay /// 0001667 // ameboidal cell migration // inferred from electronic annotation /// 0001736 // establishment of planar polarity // inferred from electronic annotation /// 0001756 // somitogenesis // not recorded /// 0001756 // somitogenesis // inferred from electronic annotation /// 0001837 // epithelial to mesenchymal transition // inferred from expression pattern /// 0001843 // neural tube closure // not recorded /// 0001843 // neural tube closure // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from electronic annotation /// 0001938 // positive regulation of endothelial cell proliferation // inferred from mutant phenotype /// 0001947 // heart looping // not recorded /// 0001947 // heart looping // inferred from electronic annotation /// 0002009 // morphogenesis of an epithelium // inferred from electronic annotation /// 0002053 // positive regulation of mesenchymal cell proliferation // not recorded /// 0002053 // positive regulation of mesenchymal cell proliferation // inferred from electronic annotation /// 0002088 // lens development in camera-type eye // inferred from sequence or structural similarity /// 0002741 // positive regulation of cytokine secretion involved in immune response // inferred from mutant phenotype /// 0003323 // type B pancreatic cell development // not recorded /// 0003323 // type B pancreatic cell development // inferred from electronic annotation /// 0003344 // pericardium morphogenesis // not recorded /// 0003344 // pericardium morphogenesis // inferred from electronic annotation /// 0003401 // axis elongation // inferred from electronic annotation /// 0003408 // optic cup formation involved in camera-type eye development // inferred from sequence or structural similarity /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007165 // signal transduction // inferred by curator /// 0007223 // Wnt receptor signaling pathway, calcium modulating pathway // inferred from direct assay /// 0007223 // Wnt receptor signaling pathway, calcium modulating pathway // inferred from mutant phenotype /// 0007223 // Wnt receptor signaling pathway, calcium modulating pathway // inferred from electronic annotation /// 0007254 // JNK cascade // inferred from electronic annotation /// 0007257 // activation of JUN kinase activity // inferred from direct assay /// 0007257 // activation of JUN kinase activity // inferred from mutant phenotype /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007411 // axon guidance // inferred from sequence or structural similarity /// 0007411 // axon guidance // inferred from electronic annotation /// 0007442 // hindgut morphogenesis // inferred from electronic annotation /// 0007494 // midgut development // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008584 // male gonad development // inferred from expression pattern /// 0008584 // male gonad development // inferred from electronic annotation /// 0008595 // anterior/posterior axis specification, embryo // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0009950 // dorsal/ventral axis specification // not recorded /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from expression pattern /// 0010033 // response to organic substance // inferred from electronic annotation /// 0010595 // positive regulation of endothelial cell migration // inferred from mutant phenotype /// 0010820 // positive regulation of T cell chemotaxis // inferred from mutant phenotype /// 0010976 // positive regulation of neuron projection development // inferred from sequence or structural similarity /// 0010976 // positive regulation of neuron projection development // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0016055 // Wnt receptor signaling pathway // inferred from direct assay /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0016477 // cell migration // inferred from electronic annotation /// 0021891 // olfactory bulb interneuron development // inferred from sequence or structural similarity /// 0021891 // olfactory bulb interneuron development // inferred from electronic annotation /// 0021915 // neural tube development // inferred from electronic annotation /// 0022409 // positive regulation of cell-cell adhesion // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from sequence or structural similarity /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0030216 // keratinocyte differentiation // inferred from expression pattern /// 0030324 // lung development // inferred from electronic annotation /// 0030326 // embryonic limb morphogenesis // inferred from electronic annotation /// 0030514 // negative regulation of BMP signaling pathway // not recorded /// 0030514 // negative regulation of BMP signaling pathway // inferred from electronic annotation /// 0030825 // positive regulation of cGMP metabolic process // inferred from direct assay /// 0030850 // prostate gland development // inferred from electronic annotation /// 0032148 // activation of protein kinase B activity // inferred from direct assay /// 0032355 // response to estradiol stimulus // inferred from electronic annotation /// 0032729 // positive regulation of interferon-gamma production // inferred from electronic annotation /// 0032755 // positive regulation of interleukin-6 production // inferred from mutant phenotype /// 0032755 // positive regulation of interleukin-6 production // inferred from electronic annotation /// 0033574 // response to testosterone stimulus // inferred from electronic annotation /// 0034613 // cellular protein localization // inferred from direct assay /// 0034613 // cellular protein localization // inferred from electronic annotation /// 0035108 // limb morphogenesis // inferred from electronic annotation /// 0035121 // tail morphogenesis // not recorded /// 0035121 // tail morphogenesis // inferred from electronic annotation /// 0040037 // negative regulation of fibroblast growth factor receptor signaling pathway // not recorded /// 0040037 // negative regulation of fibroblast growth factor receptor signaling pathway // inferred from electronic annotation /// 0042060 // wound healing // inferred from direct assay /// 0042472 // inner ear morphogenesis // inferred from electronic annotation /// 0042733 // embryonic digit morphogenesis // not recorded /// 0042733 // embryonic digit morphogenesis // inferred from electronic annotation /// 0043032 // positive regulation of macrophage activation // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043507 // positive regulation of JUN kinase activity // inferred from electronic annotation /// 0045080 // positive regulation of chemokine biosynthetic process // inferred from mutant phenotype /// 0045599 // negative regulation of fat cell differentiation // inferred from mutant phenotype /// 0045732 // positive regulation of protein catabolic process // inferred from genetic interaction /// 0045766 // positive regulation of angiogenesis // inferred from mutant phenotype /// 0045778 // positive regulation of ossification // inferred from mutant phenotype /// 0045836 // positive regulation of meiosis // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0046330 // positive regulation of JNK cascade // not recorded /// 0046330 // positive regulation of JNK cascade // inferred from electronic annotation /// 0046546 // development of primary male sexual characteristics // inferred from electronic annotation /// 0048146 // positive regulation of fibroblast proliferation // inferred from direct assay /// 0048286 // lung alveolus development // inferred from electronic annotation /// 0048546 // digestive tract morphogenesis // not recorded /// 0048546 // digestive tract morphogenesis // inferred from electronic annotation /// 0048706 // embryonic skeletal system development // inferred from mutant phenotype /// 0048806 // genitalia development // inferred from mutant phenotype /// 0048812 // neuron projection morphogenesis // inferred from electronic annotation /// 0048843 // negative regulation of axon extension involved in axon guidance // inferred from electronic annotation /// 0048850 // hypophysis morphogenesis // inferred from electronic annotation /// 0050679 // positive regulation of epithelial cell proliferation // inferred from electronic annotation /// 0050680 // negative regulation of epithelial cell proliferation // inferred from electronic annotation /// 0050718 // positive regulation of interleukin-1 beta secretion // inferred from mutant phenotype /// 0050718 // positive regulation of interleukin-1 beta secretion // inferred from electronic annotation /// 0050729 // positive regulation of inflammatory response // inferred from mutant phenotype /// 0050919 // negative chemotaxis // inferred from electronic annotation /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0051216 // cartilage development // inferred from electronic annotation /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation /// 0051964 // negative regulation of synapse assembly // inferred from electronic annotation /// 0055093 // response to hyperoxia // inferred from electronic annotation /// 0060021 // palate development // inferred from mutant phenotype /// 0060026 // convergent extension // inferred from electronic annotation /// 0060029 // convergent extension involved in organogenesis // not recorded /// 0060029 // convergent extension involved in organogenesis // inferred from electronic annotation /// 0060065 // uterus development // not recorded /// 0060065 // uterus development // inferred from electronic annotation /// 0060067 // cervix development // not recorded /// 0060067 // cervix development // inferred from electronic annotation /// 0060068 // vagina development // not recorded /// 0060068 // vagina development // inferred from electronic annotation /// 0060070 // canonical Wnt receptor signaling pathway // inferred from electronic annotation /// 0060071 // Wnt receptor signaling pathway, planar cell polarity pathway // not recorded /// 0060071 // Wnt receptor signaling pathway, planar cell polarity pathway // inferred from electronic annotation /// 0060157 // urinary bladder development // not recorded /// 0060157 // urinary bladder development // inferred from electronic annotation /// 0060210 // metestrus // inferred from electronic annotation /// 0060324 // face development // inferred from mutant phenotype /// 0060340 // positive regulation of type I interferon-mediated signaling pathway // inferred from direct assay /// 0060541 // respiratory system development // not recorded /// 0060599 // lateral sprouting involved in mammary gland duct morphogenesis // not recorded /// 0060599 // lateral sprouting involved in mammary gland duct morphogenesis // inferred from electronic annotation /// 0060606 // tube closure // inferred from electronic annotation /// 0060638 // mesenchymal-epithelial cell signaling // inferred from electronic annotation /// 0060686 // negative regulation of prostatic bud formation // inferred from electronic annotation /// 0060744 // mammary gland branching involved in thelarche // not recorded /// 0060744 // mammary gland branching involved in thelarche // inferred from electronic annotation /// 0060750 // epithelial cell proliferation involved in mammary gland duct elongation // not recorded /// 0060750 // epithelial cell proliferation involved in mammary gland duct elongation // inferred from electronic annotation /// 0060760 // positive regulation of response to cytokine stimulus // inferred from direct assay /// 0060762 // regulation of branching involved in mammary gland duct morphogenesis // not recorded /// 0060762 // regulation of branching involved in mammary gland duct morphogenesis // inferred from electronic annotation /// 0060907 // positive regulation of macrophage cytokine production // inferred from mutant phenotype /// 0061036 // positive regulation of cartilage development // not recorded /// 0061036 // positive regulation of cartilage development // inferred from electronic annotation /// 0061347 // planar cell polarity pathway involved in outflow tract morphogenesis // inferred from electronic annotation /// 0061348 // planar cell polarity pathway involved in ventricular septum morphogenesis // inferred from electronic annotation /// 0061349 // planar cell polarity pathway involved in cardiac right atrium morphogenesis // inferred from electronic annotation /// 0061350 // planar cell polarity pathway involved in cardiac muscle tissue morphogenesis // inferred from electronic annotation /// 0061354 // planar cell polarity pathway involved in pericardium morphogenesis // inferred from electronic annotation /// 0070245 // positive regulation of thymocyte apoptotic process // not recorded /// 0070245 // positive regulation of thymocyte apoptotic process // inferred from electronic annotation /// 0071219 // cellular response to molecule of bacterial origin // inferred from electronic annotation /// 0071222 // cellular response to lipopolysaccharide // inferred from expression pattern /// 0071277 // cellular response to calcium ion // inferred from expression pattern /// 0071300 // cellular response to retinoic acid // inferred from sequence or structural similarity /// 0071346 // cellular response to interferon-gamma // inferred from expression pattern /// 0071425 // hemopoietic stem cell proliferation // inferred from direct assay /// 0071425 // hemopoietic stem cell proliferation // inferred from electronic annotation /// 0071542 // dopaminergic neuron differentiation // not recorded /// 0071542 // dopaminergic neuron differentiation // inferred from electronic annotation /// 0071560 // cellular response to transforming growth factor beta stimulus // inferred from expression pattern /// 0072201 // negative regulation of mesenchymal cell proliferation // inferred from direct assay /// 0090009 // primitive streak formation // not recorded /// 0090009 // primitive streak formation // inferred from electronic annotation /// 0090037 // positive regulation of protein kinase C signaling cascade // inferred from mutant phenotype /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from direct assay /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from genetic interaction /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from electronic annotation /// 0090103 // cochlea morphogenesis // not recorded /// 0090103 // cochlea morphogenesis // inferred from electronic annotation /// 0090179 // planar cell polarity pathway involved in neural tube closure // inferred from electronic annotation /// 2000049 // positive regulation of cell-cell adhesion mediated by cadherin // inferred from electronic annotation /// 2000484 // positive regulation of interleukin-8 secretion // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // not recorded /// 0009986 // cell surface // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from electronic annotation","0003700 // sequence-specific DNA binding transcription factor activity // inferred from mutant phenotype /// 0005102 // receptor binding // inferred from electronic annotation /// 0005109 // frizzled binding // inferred from physical interaction /// 0005109 // frizzled binding // inferred from electronic annotation /// 0005110 // frizzled-2 binding // not recorded /// 0005110 // frizzled-2 binding // inferred from electronic annotation /// 0005115 // receptor tyrosine kinase-like orphan receptor binding // inferred from physical interaction /// 0005125 // cytokine activity // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0048018 // receptor agonist activity // inferred by curator","chr3:55504054-55521099 (-) // 100.0 // p14.3"]
["11725427_a_at",0.066408634,-0.15467739,-0.25363016,0.007820606,0.029398441,-0.007820606,0.6417683,0.26350242,-1.0895752,-0.12376573,1.0895752,"down","ABLIM3",22885.0,"0007010 // cytoskeleton organization // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0008270 // zinc ion binding // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr5:148521045-148639999 (+) // 98.42 // q32"]
["11720707_at",0.06994057,0.075696945,0.0036201477,-0.043273926,-0.0036201477,-0.020580292,0.35804576,0.04892096,1.0513507,0.07224401,1.0513507,"up","BCCIP",56647.0,"0000079 // regulation of cyclin-dependent protein kinase activity // inferred from direct assay /// 0000079 // regulation of cyclin-dependent protein kinase activity // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0061101 // neuroendocrine cell differentiation // inferred from direct assay","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0019908 // nuclear cyclin-dependent protein kinase holoenzyme complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0019207 // kinase regulator activity // inferred from direct assay","chr10:127512106-127525120 (+) // 88.1 // q26.2"]
["11749233_s_at",-0.046684265,0.036286354,0.0815649,-0.040628433,0.18720245,-0.036286354,0.96247566,0.8842617,-1.0090798,-0.01304029,1.0090798,"down","NAP1L1",4673.0,"0006260 // DNA replication // traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0006334 // nucleosome assembly // traceable author statement /// 0008284 // positive regulation of cell proliferation // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005678 // chromatin assembly complex // traceable author statement /// 0042470 // melanosome // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr12:76441746-76478511 (-) // 97.33 // q21.2"]
["11725213_at",0.09796047,0.036799908,0.025103092,-0.0739789,-0.110908985,-0.025103092,0.26437804,0.021371828,1.0892121,0.12328486,1.0892121,"up","METTL7B",196410.0,"0008152 // metabolic process // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation","","0008168 // methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr12:56075329-56078395 (+) // 97.1 // q13.2"]
["11749274_a_at",-0.12147188,-0.15925264,-0.23935032,0.16334963,0.16431713,0.12147188,0.09037994,9.990373E-4,-1.2509907,-0.32307112,1.2509907,"down","RGL3",57139.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0008321 // Ral guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0017016 // Ras GTPase binding // inferred from electronic annotation","chr19:11512903-11529990 (-) // 99.11 // p13.2"]
["11756942_s_at",-0.009999752,0.009999752,0.064407825,-0.08679676,-0.20952702,0.022274494,0.5710217,0.18503052,1.0813391,0.11281904,1.0813391,"up","ING5",84289.0,"0006260 // DNA replication // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006473 // protein acetylation // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0016568 // chromatin modification // inferred from electronic annotation /// 0043966 // histone H3 acetylation // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045926 // negative regulation of growth // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0070776 // MOZ/MORF histone acetyltransferase complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0035064 // methylated histone residue binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:242642331-242665822 (+) // 84.28 // q37.3"]
["11726527_s_at",0.027570724,0.011854649,-0.13642311,-0.02465105,-0.011854172,0.05214262,0.8236694,0.54867935,-1.0263659,-0.03754511,1.0263659,"down","MFAP3L",9848.0,"","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr4:170907754-170947559 (-) // 94.32 // q33"]
["11716401_a_at",-0.04817581,-0.009600639,-0.132514,0.094306946,0.009600639,0.10582638,0.356088,0.047881898,-1.0968312,-0.13334152,1.0968312,"down","SELENBP1",8991.0,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008430 // selenium binding // inferred from electronic annotation /// 0008430 // selenium binding // traceable author statement","chr1:151336779-151342455 (-) // 86.61 // q21.3"]
["11739149_a_at",-0.044011593,-0.03320837,0.14717102,0.048453808,0.03320837,-0.050269127,0.9546208,0.86165804,1.0089486,0.012852629,1.0089486,"up","SAMHD1",25939.0,"0006955 // immune response // non-traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0045087 // innate immune response // inferred from electronic annotation /// 0045088 // regulation of innate immune response // inferred from mutant phenotype /// 0051607 // defense response to virus // inferred from mutant phenotype","0005622 // intracellular // non-traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from direct assay /// 0003824 // catalytic activity // inferred from electronic annotation /// 0008081 // phosphoric diester hydrolase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr20:35520346-35580304 (-) // 95.5 // q11.23"]
["11761075_a_at",0.21004534,-0.0046844482,0.0046844482,0.09209871,-0.06398535,-0.011168003,0.79108495,0.48491025,1.0456258,0.06436665,1.0456258,"up","SCP2",6342.0,"0006699 // bile acid biosynthetic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // inferred from electronic annotation /// 0007031 // peroxisome organization // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008206 // bile acid metabolic process // traceable author statement /// 0033540 // fatty acid beta-oxidation using acyl-CoA oxidase // traceable author statement /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005777 // peroxisome // inferred from direct assay /// 0005777 // peroxisome // inferred from electronic annotation /// 0005782 // peroxisomal matrix // traceable author statement /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0003824 // catalytic activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008289 // lipid binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0016747 // transferase activity, transferring acyl groups other than amino-acyl groups // inferred from electronic annotation /// 0032934 // sterol binding // inferred from electronic annotation /// 0033814 // propanoyl-CoA C-acyltransferase activity // inferred from electronic annotation","chr1:53480626-53514241 (+) // 53.71 // p32.3"]
["11717616_at",-0.0026426315,0.019909859,0.13741493,-0.0076417923,0.0026426315,-0.0076417923,0.6463522,0.26954567,1.0394169,0.05577443,1.0394169,"up","OXSR1",9943.0,"0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0006979 // response to oxidative stress // traceable author statement /// 0007243 // intracellular protein kinase cascade // inferred from direct assay /// 0016310 // phosphorylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:38207010-38296979 (+) // 98.03 // p22.2"]
["11715316_x_at",-0.2718253,-0.1235261,-0.0380826,0.17926407,0.0380826,0.11295462,0.30989364,0.032874268,-1.1929871,-0.2545784,1.1929871,"down","HLA-C",3107.0,"0001539 // ciliary or flagellar motility // non-traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // inferred from electronic annotation /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0002480 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-independent // traceable author statement /// 0006955 // immune response // inferred from electronic annotation /// 0006955 // immune response // non-traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0019882 // antigen processing and presentation // inferred from electronic annotation /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0050776 // regulation of immune response // traceable author statement /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060337 // type I interferon-mediated signaling pathway // traceable author statement","0000139 // Golgi membrane // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005858 // axonemal dynein complex // non-traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0012507 // ER to Golgi transport vesicle membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016020 // membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030670 // phagocytic vesicle membrane // traceable author statement /// 0031901 // early endosome membrane // traceable author statement /// 0042612 // MHC class I protein complex // inferred from electronic annotation /// 0071556 // integral to lumenal side of endoplasmic reticulum membrane // traceable author statement","0003777 // microtubule motor activity // non-traceable author statement /// 0032393 // MHC class I receptor activity // non-traceable author statement /// 0032395 // MHC class II receptor activity // non-traceable author statement","chr6:31236529-31239855 (-) // 98.77 // p21.33"]
["11716655_a_at",0.02588749,0.0044384003,-0.018350601,-0.0044384003,-0.09352112,0.006608963,0.72052205,0.37053466,1.0241606,0.034441996,1.0241606,"up","TRAF4",9618.0,"0006915 // apoptotic process // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007585 // respiratory gaseous exchange // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0030323 // respiratory tube development // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0045860 // positive regulation of protein kinase activity // inferred from direct assay /// 0046330 // positive regulation of JNK cascade // inferred from direct assay /// 0090073 // positive regulation of protein homodimerization activity // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005923 // tight junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0003677 // DNA binding // traceable author statement /// 0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0031996 // thioesterase binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050699 // WW domain binding // inferred from physical interaction","chr17:27071001-27077974 (+) // 95.09 // q11.2"]
["11756266_a_at",0.017897129,-0.01917696,0.030393124,-0.017897129,0.18434143,-0.07668066,0.93805414,0.8139488,-1.0141119,-0.020216819,1.0141119,"down","CYFIP2",26999.0,"0006915 // apoptotic process // inferred from direct assay /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0016337 // cell-cell adhesion // inferred from direct assay","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0019717 // synaptosome // inferred from direct assay /// 0019717 // synaptosome // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr5:156693096-156731458 (+) // 94.09 // q33.3"]
["11752756_s_at",-0.19483328,0.043075085,-0.054804325,0.068110466,0.046248913,-0.043075085,0.66732055,0.29515612,-1.0663016,-0.09261554,1.0663016,"down","TBC1D26 /// TBC1D28","254272 /// 353149","0032313 // regulation of Rab GTPase activity // inferred from electronic annotation /// 0032851 // positive regulation of Rab GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005097 // Rab GTPase activator activity // inferred from electronic annotation","chr17:15635596-15644255 (+) // 99.81 // p12"]
["11717263_s_at",-0.039438725,-0.063756466,-0.065813065,0.039438248,0.11328888,0.04036808,0.19314429,0.009572168,-1.0872631,-0.1207011,1.0872631,"down","ATPAF1",64756.0,"0006461 // protein complex assembly // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr1:47098412-47134215 (-) // 77.03 // p33"]
["11751855_x_at",-0.015087128,0.11117458,-0.032280207,-0.0829432,0.027598143,0.015086889,0.8359249,0.57667434,1.0243356,0.03468849,1.0243356,"up","GSG1L",146395.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr16:27802690-27895891 (-) // 88.96 // p12.1"]
["11726245_s_at",-6.1511993E-4,0.021695137,-0.019298553,6.1416626E-4,0.046099663,-0.00835228,0.8403006,0.58582026,-1.0084876,-0.012193319,1.0084876,"down","HIST1H4A /// HIST1H4B /// HIST1H4C /// HIST1H4D /// HIST1H4E /// HIST1H4F /// HIST1H4H /// HIST1H4I /// HIST1H4J /// HIST1H4K /// HIST1H4L /// HIST2H4A /// HIST2H4B /// HIST4H4","121504 /// 554313 /// 8294 /// 8359 /// 8360 /// 8361 /// 8362 /// 8363 /// 8364 /// 8365 /// 8366 /// 8367 /// 8368 /// 8370","0000723 // telomere maintenance // traceable author statement /// 0006325 // chromatin organization // non-traceable author statement /// 0006334 // nucleosome assembly // traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0034080 // CenH3-containing nucleosome assembly at centromere // traceable author statement /// 0045653 // negative regulation of megakaryocyte differentiation // inferred from direct assay /// 0048015 // phosphatidylinositol-mediated signaling // non-traceable author statement","0000786 // nucleosome // traceable author statement /// 0000786 // nucleosome // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr6:26104159-26104857 (+) // 75.87 // p22.2"]
["11729200_at",0.016907215,-0.17346859,-0.02196312,-0.013551235,0.013551235,0.056653976,0.6483429,0.27187875,-1.0558412,-0.07839288,1.0558412,"down","C6orf120",387263.0,"0006915 // apoptotic process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","","chr6:170102215-170106454 (+) // 98.02 // q27"]
["11750164_a_at",-0.13930035,-0.047678947,0.034820557,-0.034820557,0.1390276,0.09482288,0.56676394,0.18148609,-1.0845246,-0.117062815,1.0845246,"down","SCRN3",79634.0,"0006508 // proteolysis // inferred from electronic annotation","","0016805 // dipeptidase activity // inferred from electronic annotation","chr2:175260472-175293145 (+) // 98.83 // q31.1"]
["11730515_a_at",0.15293598,-0.060638905,0.08730698,-0.008582592,0.008582592,-0.03804016,0.68887144,0.32434946,1.0515723,0.07254808,1.0515723,"up","SGOL1",151648.0,"0000087 // M phase of mitotic cell cycle // traceable author statement /// 0000236 // mitotic prometaphase // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007059 // chromosome segregation // inferred from direct assay /// 0007059 // chromosome segregation // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0008608 // attachment of spindle microtubules to kinetochore // inferred from direct assay /// 0010457 // centriole-centriole cohesion // inferred from direct assay /// 0045132 // meiotic chromosome segregation // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0000775 // chromosome, centromeric region // inferred from direct assay /// 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from direct assay /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0000779 // condensed chromosome, centromeric region // inferred from direct assay /// 0000780 // condensed nuclear chromosome, centromeric region // inferred from electronic annotation /// 0000922 // spindle pole // inferred from direct assay /// 0000922 // spindle pole // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0030892 // mitotic cohesin complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr3:20211546-20227683 (-) // 78.81 // p24.3"]
["11717833_a_at",0.008562565,0.09874773,-0.008563042,-0.06630039,-0.14298916,0.06065035,0.6651204,0.29241526,1.0588235,0.08246207,1.0588235,"up","TEX10",54881.0,"","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation /// 0071339 // MLL1 complex // inferred from direct assay","","chr9:103064365-103115259 (-) // 98.26 // q31.1"]
["11755928_s_at",-0.032716036,0.12992263,0.15154815,0.028660536,-0.097513676,-0.028660536,0.5518869,0.1679703,1.0832925,0.115422815,1.0832925,"up","MMP1",4312.0,"0006508 // proteolysis // inferred from electronic annotation /// 0006508 // proteolysis // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0030574 // collagen catabolic process // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0050900 // leukocyte migration // traceable author statement","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005581 // collagen // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from electronic annotation","0004222 // metalloendopeptidase activity // inferred from direct assay /// 0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0004222 // metalloendopeptidase activity // traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008270 // zinc ion binding // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:102660650-102668889 (-) // 99.95 // q22.2"]
["11719582_at",0.07142019,0.01305294,-0.036817074,0.036816597,-0.01305294,-0.21309614,0.7341634,0.39262396,1.0562829,0.07899625,1.0562829,"up","RPP30",10556.0,"0008033 // tRNA processing // inferred from electronic annotation","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005655 // nucleolar ribonuclease P complex // traceable author statement /// 0005730 // nucleolus // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004526 // ribonuclease P activity // inferred from electronic annotation /// 0004526 // ribonuclease P activity // traceable author statement /// 0004540 // ribonuclease activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr10:92616277-92662772 (+) // 67.86 // q23.31"]
["11739313_a_at",-0.017071724,0.012992859,0.08328152,-0.020751953,0.02984047,-0.012992859,0.7741939,0.4564915,1.0193874,0.027702376,1.0193874,"up","PWP1",11137.0,"0006351 // transcription, DNA-dependent // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement","","chr12:108079559-108106257 (+) // 97.13 // q23.3"]
["11745111_a_at",-0.07825756,0.05466771,0.057064056,-0.14502525,0.16137195,-0.05466795,0.94223255,0.82484215,1.0167266,0.023931805,1.0167266,"up","DLGAP1",9229.0,"0007267 // cell-cell signaling // inferred from electronic annotation /// 0007268 // synaptic transmission // non-traceable author statement /// 0007268 // synaptic transmission // traceable author statement","0005886 // plasma membrane // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from electronic annotation","chr18:3708345-3880076 (-) // 98.15 // p11.31"]
["11716738_at",0.030594826,0.04749489,0.003712654,-0.003712654,-0.028559685,-0.04297352,0.32652095,0.037910674,1.0369523,0.05234947,1.0369523,"up","MSRB1",51734.0,"0030091 // protein repair // inferred from sequence or structural similarity /// 0030091 // protein repair // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0000318 // protein-methionine-R-oxide reductase activity // inferred from electronic annotation /// 0008113 // peptide-methionine-(S)-S-oxide reductase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from sequence or structural similarity /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0033743 // peptide-methionine (R)-S-oxide reductase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070191 // methionine-R-sulfoxide reductase activity // inferred from electronic annotation","chr16:1988239-1993327 (-) // 95.68 // p13.3"]
["11734425_a_at",-0.08863878,0.056143284,-0.056143284,0.11606121,0.07701397,-0.15889883,0.8884772,0.6930378,-1.0287827,-0.04093832,1.0287827,"down","CDH23 /// LOC100653137","100653137 /// 64072","0006816 // calcium ion transport // inferred from mutant phenotype /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from electronic annotation /// 0007601 // visual perception // inferred from electronic annotation /// 0007605 // sensory perception of sound // inferred from mutant phenotype /// 0007605 // sensory perception of sound // inferred from electronic annotation /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0016339 // calcium-dependent cell-cell adhesion // non-traceable author statement /// 0042472 // inner ear morphogenesis // inferred from electronic annotation /// 0042491 // auditory receptor cell differentiation // inferred from electronic annotation /// 0045494 // photoreceptor cell maintenance // inferred from mutant phenotype /// 0048563 // post-embryonic organ morphogenesis // inferred from electronic annotation /// 0048839 // inner ear development // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050953 // sensory perception of light stimulus // inferred from mutant phenotype /// 0050953 // sensory perception of light stimulus // inferred from electronic annotation /// 0050957 // equilibrioception // inferred from mutant phenotype /// 0051480 // cytosolic calcium ion homeostasis // inferred from mutant phenotype /// 0060088 // auditory receptor cell stereocilium organization // inferred from electronic annotation","0001917 // photoreceptor inner segment // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0005932 // microtubule basal body // inferred from electronic annotation /// 0016020 // membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0032420 // stereocilium // inferred from sequence or structural similarity /// 0032420 // stereocilium // inferred from electronic annotation /// 0032426 // stereocilium bundle tip // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr10:73156703-73575704 (+) // 99.41 // q22.1"]
["11750394_x_at",0.0022387505,0.046452045,1.5115738E-4,-1.5163422E-4,-0.25258732,-0.06785631,0.5706183,0.18469909,1.089107,0.123145744,1.089107,"up","MED15",51586.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0010467 // gene expression // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016592 // mediator complex // inferred from electronic annotation","0001104 // RNA polymerase II transcription cofactor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr22:20877929-20941363 (+) // 92.81 // q11.21"]
["11715230_s_at",0.039984226,0.14482403,-0.046801567,0.037395477,-0.037395477,-0.046801567,0.7220109,0.3729771,1.0436245,0.061602745,1.0436245,"up","PARD6A",50855.0,"0007049 // cell cycle // inferred from electronic annotation /// 0016032 // viral reproduction // traceable author statement /// 0034329 // cell junction assembly // traceable author statement /// 0045216 // cell-cell junction organization // traceable author statement /// 0045217 // cell-cell junction maintenance // inferred from sequence or structural similarity /// 0045217 // cell-cell junction maintenance // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 0070830 // tight junction assembly // traceable author statement","0001726 // ruffle // inferred from electronic annotation /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005923 // tight junction // inferred from sequence or structural similarity /// 0005923 // tight junction // inferred from electronic annotation /// 0005938 // cell cortex // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from electronic annotation","0005080 // protein kinase C binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // traceable author statement /// 0017048 // Rho GTPase binding // inferred from sequence or structural similarity /// 0017048 // Rho GTPase binding // inferred from electronic annotation /// 0030742 // GTP-dependent protein binding // inferred from sequence or structural similarity /// 0030742 // GTP-dependent protein binding // inferred from electronic annotation","chr16:67694850-67696680 (+) // 91.99 // q22.1"]
["11725826_at",-0.085566044,0.1667273,-0.02707076,0.11945915,0.02707076,-0.02707076,0.9386184,0.81544787,-1.015218,-0.02178958,1.015218,"down","CD1D",912.0,"0006955 // immune response // inferred from electronic annotation /// 0016045 // detection of bacterium // traceable author statement /// 0019882 // antigen processing and presentation // inferred from electronic annotation /// 0034113 // heterotypic cell-cell adhesion // traceable author statement /// 0042102 // positive regulation of T cell proliferation // inferred from direct assay /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045058 // T cell selection // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation /// 0045089 // positive regulation of innate immune response // traceable author statement /// 0048006 // antigen processing and presentation, endogenous lipid antigen via MHC class Ib // inferred from direct assay","0005737 // cytoplasm // inferred from direct assay /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred by curator /// 0030881 // beta-2-microglobulin binding // traceable author statement /// 0030882 // lipid antigen binding // inferred from direct assay /// 0030884 // exogenous lipid antigen binding // inferred from direct assay /// 0042393 // histone binding // inferred from physical interaction /// 0043499 // eukaryotic cell surface binding // inferred from direct assay /// 0050839 // cell adhesion molecule binding // inferred from physical interaction","chr1:158149667-158156214 (+) // 76.8 // q23.1"]
["11763858_a_at",0.034095526,0.13685107,-0.020457268,0.020457268,-0.020457268,-0.05322671,0.63283175,0.2523043,1.0481937,0.06790533,1.0481937,"up","UTY",7404.0,"0016568 // chromatin modification // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016702 // oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chrY:15470988-15471751 (-) // 100.0 // q11.221"]
["11763545_a_at",-0.032524824,-0.10912371,0.032524824,0.23502803,0.032524824,-0.032524824,0.64924,0.27310273,-1.0827628,-0.114717275,1.0827628,"down","ATP10B",23120.0,"0006812 // cation transport // inferred from electronic annotation /// 0015914 // phospholipid transport // inferred from electronic annotation /// 0045332 // phospholipid translocation // non-traceable author statement","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0004012 // phospholipid-translocating ATPase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0015662 // ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016820 // hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr5:160039246-160061565 (-) // 90.59 // q34"]
["11719555_a_at",-0.0056991577,-0.04988146,-0.19556189,0.035750866,0.0056991577,0.06472111,0.48733416,0.117386416,-1.0860605,-0.119104505,1.0860605,"down","PDK2",5164.0,"0000160 // two-component signal transduction system (phosphorelay) // inferred from electronic annotation /// 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006006 // glucose metabolic process // inferred from electronic annotation /// 0006006 // glucose metabolic process // traceable author statement /// 0006090 // pyruvate metabolic process // traceable author statement /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0010510 // regulation of acetyl-CoA biosynthetic process from pyruvate // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018106 // peptidyl-histidine phosphorylation // inferred from electronic annotation /// 0023014 // signal transduction by phosphorylation // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement /// 0005759 // mitochondrial matrix // inferred from electronic annotation /// 0045254 // pyruvate dehydrogenase complex // inferred from electronic annotation","0000155 // two-component sensor activity // inferred from electronic annotation /// 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004673 // protein histidine kinase activity // inferred from electronic annotation /// 0004740 // pyruvate dehydrogenase (acetyl-transferring) kinase activity // inferred from electronic annotation /// 0004740 // pyruvate dehydrogenase (acetyl-transferring) kinase activity // traceable author statement /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0032403 // protein complex binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr17:48172638-48188733 (+) // 98.66 // q21.33"]
["11737485_a_at",-0.05082655,0.038801193,-0.113521576,0.13641572,-0.038801193,0.1638937,0.55482405,0.17066498,-1.0935494,-0.12901835,1.0935494,"down","C11orf65",160140.0,"","","","chr11:108253727-108338245 (-) // 91.31 // q22.3"]
["11758180_s_at",0.06574774,-0.053869247,0.292284,-0.054047108,-0.0012631416,0.0012631416,0.6792333,0.31121385,1.0862854,0.11940313,1.0862854,"up","LOC100128551 /// ZDHHC14","100128551 /// 79683","","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:158094674-158094969 (+) // 96.39 // q25.3"]
["11717849_at",0.011701584,-0.01904583,0.0013580322,-0.0013580322,-0.012212753,0.007543564,0.9996662,0.9990408,1.0000094,1.3586565E-5,1.0000094,"up","CCDC167",154467.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr6:37450714-37467700 (-) // 94.06 // p21.2"]
["11720520_s_at",-0.26589012,0.1770916,0.1376276,-0.088523865,-0.040201187,0.040201187,0.9223929,0.770164,1.0322442,0.04578432,1.0322442,"up","LOC728802 /// PDE4DIP","728802 /// 9659","0043623 // cellular protein complex assembly // inferred from sequence or structural similarity","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from sequence or structural similarity /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005813 // centrosome // inferred from sequence or structural similarity /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0030016 // myofibril // inferred from sequence or structural similarity","0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from sequence or structural similarity","chr1:144851426-144995033 (-) // 98.32 // q21.1"]
["11728832_at",0.0043447018,-0.018308163,0.14521122,-0.053020477,0.011764765,-0.0043447018,0.70146865,0.3420814,1.0417069,0.058949437,1.0417069,"up","DSG3",1830.0,"0006915 // apoptotic process // traceable author statement /// 0006921 // cellular component disassembly involved in apoptotic process // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from electronic annotation","0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030057 // desmosome // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr18:29027731-29058668 (+) // 92.88 // q12.1"]
["11746693_a_at",0.022737026,-0.023396969,0.20873022,-0.0041241646,-0.0053362846,0.0041236877,0.7220225,0.37314245,1.0505433,0.07113564,1.0505433,"up","COBL",23242.0,"0001843 // neural tube closure // inferred from electronic annotation","","0003779 // actin binding // inferred from electronic annotation","chr7:51085032-51384430 (-) // 99.95 // p12.1"]
["11763705_at",0.014282703,-0.26731372,-0.2960868,0.31772327,-0.014282703,0.16899729,0.4048751,0.06902344,-1.2662116,-0.34051853,1.2662116,"down","LOC100506379",1.00506379E8,"","","","chr6:10743556-10747802 (-) // 99.73 // p24.2"]
["11760021_at",0.0039503574,0.035542488,-0.29217505,-0.17405105,-0.003950596,0.035542488,0.92584175,0.77933,-1.025794,-0.036741078,1.025794,"down","CTNNA3",29119.0,"0007155 // cell adhesion // inferred from electronic annotation /// 0016337 // cell-cell adhesion // inferred from electronic annotation /// 0016337 // cell-cell adhesion // inferred from physical interaction","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005916 // fascia adherens // inferred from direct assay /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation","0005198 // structural molecule activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0045296 // cadherin binding // inferred from electronic annotation /// 0045296 // cadherin binding // traceable author statement","chr10:68935242-69425512 (-) // 74.83 // q21.3"]
["11760933_at",0.13971615,-0.0907917,0.16312456,0.0029621124,-0.18343544,-0.0029621124,0.64222986,0.26389527,1.0956812,0.13182808,1.0956812,"up","HSD17B7P2",158160.0,"0008152 // metabolic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","","0000166 // nucleotide binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation","chr1:162760493-162763188 (+) // 63.09 // q23.3 /// chr10:38645285-38647980 (+) // 64.46 // p11.1"]
["11746224_a_at",-0.12378073,-0.009876728,0.19555473,-0.032901764,0.009876251,0.10558939,0.98502016,0.9494014,-1.0047864,-0.006888802,1.0047864,"down","SAYSD1",55776.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","","chr6:39072668-39082905 (-) // 79.53 // p21.2"]
["11762804_x_at",-0.06884098,-0.11485577,0.05299568,0.004501343,-0.0045018196,0.12781906,0.6392985,0.26047546,-1.0615506,-0.08617316,1.0615506,"down","APP",351.0,"0000085 // G2 phase of mitotic cell cycle // inferred from sequence or structural similarity /// 0000085 // G2 phase of mitotic cell cycle // inferred from electronic annotation /// 0001967 // suckling behavior // inferred from electronic annotation /// 0002576 // platelet degranulation // traceable author statement /// 0006378 // mRNA polyadenylation // inferred from sequence or structural similarity /// 0006378 // mRNA polyadenylation // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from sequence or structural similarity /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from sequence or structural similarity /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0006878 // cellular copper ion homeostasis // inferred from sequence or structural similarity /// 0006878 // cellular copper ion homeostasis // inferred from electronic annotation /// 0006897 // endocytosis // inferred from sequence or structural similarity /// 0006897 // endocytosis // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007176 // regulation of epidermal growth factor-activated receptor activity // inferred from sequence or structural similarity /// 0007176 // regulation of epidermal growth factor-activated receptor activity // inferred from electronic annotation /// 0007219 // Notch signaling pathway // inferred from electronic annotation /// 0007409 // axonogenesis // inferred from sequence or structural similarity /// 0007409 // axonogenesis // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0007617 // mating behavior // inferred from sequence or structural similarity /// 0007617 // mating behavior // inferred from electronic annotation /// 0007626 // locomotory behavior // inferred from sequence or structural similarity /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0008088 // axon cargo transport // inferred from sequence or structural similarity /// 0008088 // axon cargo transport // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0008344 // adult locomotory behavior // inferred from sequence or structural similarity /// 0008344 // adult locomotory behavior // inferred from electronic annotation /// 0008542 // visual learning // inferred from sequence or structural similarity /// 0008542 // visual learning // inferred from electronic annotation /// 0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0010952 // positive regulation of peptidase activity // inferred from electronic annotation /// 0016199 // axon midline choice point recognition // inferred from sequence or structural similarity /// 0016199 // axon midline choice point recognition // inferred from electronic annotation /// 0016322 // neuron remodeling // inferred from sequence or structural similarity /// 0016322 // neuron remodeling // inferred from electronic annotation /// 0016358 // dendrite development // inferred from sequence or structural similarity /// 0016358 // dendrite development // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0030198 // extracellular matrix organization // inferred from sequence or structural similarity /// 0030900 // forebrain development // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from sequence or structural similarity /// 0031175 // neuron projection development // inferred from electronic annotation /// 0035235 // ionotropic glutamate receptor signaling pathway // inferred from sequence or structural similarity /// 0035235 // ionotropic glutamate receptor signaling pathway // inferred from electronic annotation /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0040014 // regulation of multicellular organism growth // inferred from sequence or structural similarity /// 0040014 // regulation of multicellular organism growth // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0045931 // positive regulation of mitotic cell cycle // inferred from sequence or structural similarity /// 0045931 // positive regulation of mitotic cell cycle // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048669 // collateral sprouting in absence of injury // inferred from sequence or structural similarity /// 0048669 // collateral sprouting in absence of injury // inferred from electronic annotation /// 0050803 // regulation of synapse structure and activity // inferred from sequence or structural similarity /// 0050803 // regulation of synapse structure and activity // inferred from electronic annotation /// 0050885 // neuromuscular process controlling balance // inferred from electronic annotation /// 0051124 // synaptic growth at neuromuscular junction // inferred from electronic annotation /// 0051402 // neuron apoptotic process // inferred from mutant phenotype /// 0051563 // smooth endoplasmic reticulum calcium ion homeostasis // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from sequence or structural similarity /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005887 // integral to plasma membrane // traceable author statement /// 0005905 // coated pit // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from sequence or structural similarity /// 0016021 // integral to membrane // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0030424 // axon // inferred from sequence or structural similarity /// 0030424 // axon // inferred from electronic annotation /// 0031093 // platelet alpha granule lumen // traceable author statement /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031594 // neuromuscular junction // inferred from electronic annotation /// 0035253 // ciliary rootlet // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from direct assay /// 0043198 // dendritic shaft // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0045177 // apical part of cell // inferred from electronic annotation /// 0045202 // synapse // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0051233 // spindle midzone // inferred from electronic annotation","0003677 // DNA binding // inferred from sequence or structural similarity /// 0003677 // DNA binding // inferred from electronic annotation /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from direct assay /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008201 // heparin binding // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0016504 // peptidase activator activity // inferred from electronic annotation /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation /// 0033130 // acetylcholine receptor binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046914 // transition metal ion binding // inferred from electronic annotation /// 0051425 // PTB domain binding // inferred from physical interaction","chr21:26968486-27543064 (-) // 65.5 // q21.3"]
["11739967_a_at",-0.091525555,0.011838436,0.14243174,-0.010457039,-0.10668039,0.010457039,0.79947114,0.5023906,1.0399218,0.056474987,1.0399218,"up","DNAJC24",120526.0,"0006457 // protein folding // inferred from electronic annotation","","0031072 // heat shock protein binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // inferred from electronic annotation","chr11:31391376-31454382 (+) // 74.4 // p13"]
["11718090_a_at",0.032492638,-0.0015668869,0.0015668869,-0.01367569,-0.08586979,0.023426056,0.7040139,0.345441,1.0254122,0.03620397,1.0254122,"up","TPCN1",53373.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0070588 // calcium ion transmembrane transport // inferred from electronic annotation","0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from direct assay /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005262 // calcium channel activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0072345 // NAADP-sensitive calcium-release channel activity // inferred from direct assay","chr12:113659259-113736390 (+) // 94.5 // q24.13"]
["11741466_a_at",-0.20942545,0.006337166,-0.13074827,0.052862167,0.17118025,-0.006337166,0.43784663,0.08798594,-1.135909,-0.1838472,1.135909,"down","KCND3",3752.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006813 // potassium ion transport // traceable author statement /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0051260 // protein homooligomerization // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0071805 // potassium ion transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0008076 // voltage-gated potassium channel complex // inferred from electronic annotation /// 0008076 // voltage-gated potassium channel complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0042383 // sarcolemma // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005249 // voltage-gated potassium channel activity // inferred from electronic annotation /// 0005250 // A-type (transient outward) potassium channel activity // inferred from electronic annotation /// 0005250 // A-type (transient outward) potassium channel activity // traceable author statement /// 0005267 // potassium channel activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:112318441-112531777 (-) // 99.3 // p13.2"]
["11739773_a_at",-0.018742085,-0.04559517,-0.031127453,0.018742085,0.10193491,0.05870104,0.2667097,0.022176778,-1.0655618,-0.09161423,1.0655618,"down","SNX20",124460.0,"0006810 // transport // inferred from electronic annotation /// 0007154 // cell communication // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008289 // lipid binding // inferred from electronic annotation /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation","chr16:50700210-50715264 (-) // 64.96 // q12.1"]
["11731785_at",-0.010222673,0.051962376,0.010222673,-0.20473385,-0.122098684,0.11537361,0.7520557,0.41947997,1.0627536,0.08780709,1.0627536,"up","IL9",3578.0,"0006954 // inflammatory response // traceable author statement /// 0006955 // immune response // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0030307 // positive regulation of cell growth // inferred from electronic annotation /// 0045407 // positive regulation of interleukin-5 biosynthetic process // inferred from sequence or structural similarity /// 0045407 // positive regulation of interleukin-5 biosynthetic process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005625 // soluble fraction // inferred from electronic annotation","0005125 // cytokine activity // inferred from electronic annotation /// 0005126 // cytokine receptor binding // inferred from electronic annotation /// 0005140 // interleukin-9 receptor binding // inferred from electronic annotation /// 0008083 // growth factor activity // inferred from electronic annotation","chr5:135227934-135231516 (-) // 92.92 // q31.1"]
["11760204_x_at",-0.06390953,-0.029387474,-0.023565292,0.023565292,0.09346557,0.109998226,0.24530919,0.017416729,-1.0826976,-0.114630386,1.0826976,"down","CKMT1A /// CKMT1B","1159 /// 548596","0006600 // creatine metabolic process // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005739 // mitochondrion // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004111 // creatine kinase activity // inferred from electronic annotation /// 0004111 // creatine kinase activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr15:43886292-43889261 (+) // 88.82 // q15.3"]
["11741596_at",-0.0050091743,0.015264273,-0.26049876,-0.023162127,0.0050091743,0.019834042,0.7408916,0.40183446,-1.0599344,-0.08397495,1.0599344,"down","SMR3A",26952.0,"","0005576 // extracellular region // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement","","chr4:71226477-71232836 (+) // 99.68 // q13.3"]
["11739172_a_at",0.009212017,-0.057707787,-0.006864071,0.02658987,0.006864071,-0.11055803,0.9629253,0.88568366,1.0050366,0.0072480296,1.0050366,"up","G2E3",55632.0,"0000209 // protein polyubiquitination // inferred from electronic annotation /// 0001824 // blastocyst development // inferred from electronic annotation /// 0006464 // cellular protein modification process // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr14:31028338-31089265 (+) // 94.36 // q12"]
["11762884_at",0.116456985,0.021892548,0.26566696,-0.021892548,-0.029958248,-0.24555182,0.43124515,0.083612405,1.1759334,0.2338063,1.1759334,"up","HSP90AB6P",541611.0,"0006457 // protein folding // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation","","0005524 // ATP binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // inferred from electronic annotation","chr13:97536095-97537843 (-) // 87.66 // q32.1"]
["11744933_a_at",0.023937225,0.0098629,0.12293339,-0.11108971,-0.0098629,-0.1475277,0.38464776,0.05976607,1.1032333,0.14173795,1.1032333,"up","ASXL1",171023.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0032526 // response to retinoic acid // inferred from sequence or structural similarity /// 0035359 // negative regulation of peroxisome proliferator activated receptor signaling pathway // inferred from sequence or structural similarity /// 0035522 // monoubiquitinated histone H2A deubiquitination // inferred from direct assay /// 0045599 // negative regulation of fat cell differentiation // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0048386 // positive regulation of retinoic acid receptor signaling pathway // inferred from sequence or structural similarity /// 0048387 // negative regulation of retinoic acid receptor signaling pathway // inferred from sequence or structural similarity","0000790 // nuclear chromatin // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0035517 // PR-DUB complex // inferred from direct assay","0003713 // transcription coactivator activity // inferred from sequence or structural similarity /// 0003714 // transcription corepressor activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0042974 // retinoic acid receptor binding // inferred from sequence or structural similarity /// 0042975 // peroxisome proliferator activated receptor binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation","chr20:30946140-30960354 (+) // 72.69 // q11.21"]
["11759062_s_at",-0.09465408,-0.005923748,0.12523603,0.005923748,0.22368431,-0.028522968,0.8445672,0.5935786,-1.0416055,-0.058808934,1.0416055,"down","SIK2",23235.0,"0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007243 // intracellular protein kinase cascade // inferred from direct assay /// 0007243 // intracellular protein kinase cascade // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0046626 // regulation of insulin receptor signaling pathway // inferred from sequence or structural similarity /// 0046777 // protein autophosphorylation // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from direct assay /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:111473114-111601579 (+) // 96.17 // q23.1"]
["11753035_x_at",-0.031018972,0.03101921,-0.051820755,-0.104611635,0.102030754,0.08426666,0.8303772,0.5629317,-1.0313272,-0.044502184,1.0313272,"down","LINC00470",56651.0,"","","","chr18:1269176-1276089 (-) // 48.75 // p11.32"]
["11736117_a_at",7.8105927E-4,-0.022425652,0.02679348,0.0059309006,-7.8105927E-4,-0.013104439,0.9289719,0.7890468,1.0030321,0.0043677604,1.0030321,"up","ZFAND5",7763.0,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0001944 // vasculature development // inferred from electronic annotation /// 0003016 // respiratory system process // inferred from electronic annotation /// 0010761 // fibroblast migration // inferred from electronic annotation /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from electronic annotation /// 0048705 // skeletal system morphogenesis // inferred from electronic annotation /// 0048745 // smooth muscle tissue development // inferred from electronic annotation /// 0060324 // face development // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:74966340-74980386 (-) // 86.52 // q21.13"]
["11742943_a_at",0.11003876,-0.13703918,-0.21122026,-0.11003876,0.1111722,0.255857,0.68291396,0.31572068,-1.1212207,-0.1650703,1.1212207,"down","CKM",1158.0,"0006600 // creatine metabolic process // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046314 // phosphocreatine biosynthetic process // inferred from electronic annotation","0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004111 // creatine kinase activity // inferred from electronic annotation /// 0004111 // creatine kinase activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr19:45809670-45826235 (-) // 90.81 // q13.32"]
["11727163_a_at",-0.15355635,-0.082743645,0.082743645,0.28368235,-0.19698477,0.54145527,0.6829458,0.31579483,-1.1979517,-0.26056972,1.1979517,"down","ACVR2A",92.0,"0001934 // positive regulation of protein phosphorylation // inferred from mutant phenotype /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007178 // transmembrane receptor protein serine/threonine kinase signaling pathway // traceable author statement /// 0007178 // transmembrane receptor protein serine/threonine kinase signaling pathway // inferred from electronic annotation /// 0007368 // determination of left/right symmetry // inferred from electronic annotation /// 0007498 // mesoderm development // inferred from electronic annotation /// 0008584 // male gonad development // inferred from electronic annotation /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0009966 // regulation of signal transduction // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0010862 // positive regulation of pathway-restricted SMAD protein phosphorylation // inferred from mutant phenotype /// 0016310 // phosphorylation // inferred from electronic annotation /// 0023014 // signal transduction by phosphorylation // inferred from electronic annotation /// 0030501 // positive regulation of bone mineralization // inferred from mutant phenotype /// 0030509 // BMP signaling pathway // inferred from direct assay /// 0030509 // BMP signaling pathway // inferred from mutant phenotype /// 0030509 // BMP signaling pathway // traceable author statement /// 0030509 // BMP signaling pathway // inferred from electronic annotation /// 0030510 // regulation of BMP signaling pathway // inferred from electronic annotation /// 0032924 // activin receptor signaling pathway // inferred from direct assay /// 0032924 // activin receptor signaling pathway // inferred from electronic annotation /// 0032927 // positive regulation of activin receptor signaling pathway // inferred from direct assay /// 0042713 // sperm ejaculation // inferred from electronic annotation /// 0043084 // penile erection // inferred from electronic annotation /// 0045648 // positive regulation of erythrocyte differentiation // inferred from direct assay /// 0045669 // positive regulation of osteoblast differentiation // inferred from mutant phenotype /// 0046881 // positive regulation of follicle-stimulating hormone secretion // inferred from electronic annotation /// 0048706 // embryonic skeletal system development // inferred from electronic annotation /// 0050999 // regulation of nitric-oxide synthase activity // inferred from electronic annotation /// 0060011 // Sertoli cell proliferation // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0034673 // inhibin-betaglycan-ActRII complex // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // not recorded /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004675 // transmembrane receptor protein serine/threonine kinase activity // traceable author statement /// 0004675 // transmembrane receptor protein serine/threonine kinase activity // inferred from electronic annotation /// 0004702 // receptor signaling protein serine/threonine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005024 // transforming growth factor beta-activated receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0015026 // coreceptor activity // inferred from direct assay /// 0016301 // kinase activity // inferred from electronic annotation /// 0016362 // activin receptor activity, type II // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0017002 // activin-activated receptor activity // inferred from direct assay /// 0017002 // activin-activated receptor activity // inferred from electronic annotation /// 0019838 // growth factor binding // inferred from electronic annotation /// 0030165 // PDZ domain binding // inferred from electronic annotation /// 0034711 // inhibin binding // inferred from electronic annotation /// 0043621 // protein self-association // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0048185 // activin binding // inferred from physical interaction /// 0048185 // activin binding // inferred from electronic annotation","chr2:148602371-148688557 (+) // 95.8 // q22.3"]
["11756255_x_at",0.007925987,-0.007925987,0.022582054,-0.05213833,0.017866135,-0.08223152,0.59422475,0.2082911,1.0326575,0.04636184,1.0326575,"up","YWHAH",7533.0,"0002028 // regulation of sodium ion transport // inferred from sequence or structural similarity /// 0006713 // glucocorticoid catabolic process // inferred from direct assay /// 0006886 // intracellular protein transport // inferred from sequence or structural similarity /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0042921 // glucocorticoid receptor signaling pathway // inferred from direct assay /// 0045664 // regulation of neuron differentiation // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0048167 // regulation of synaptic plasticity // inferred from sequence or structural similarity /// 0050774 // negative regulation of dendrite morphogenesis // inferred from sequence or structural similarity /// 0050774 // negative regulation of dendrite morphogenesis // inferred from electronic annotation /// 2000649 // regulation of sodium ion transmembrane transporter activity // inferred from sequence or structural similarity","0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0014704 // intercalated disc // inferred by curator","0003779 // actin binding // inferred from electronic annotation /// 0004497 // monooxygenase activity // inferred from electronic annotation /// 0005159 // insulin-like growth factor receptor binding // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0017080 // sodium channel regulator activity // inferred from sequence or structural similarity /// 0019899 // enzyme binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from sequence or structural similarity /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0035259 // glucocorticoid receptor binding // inferred from physical interaction /// 0044325 // ion channel binding // inferred from sequence or structural similarity","chr22:32340981-32353590 (+) // 98.61 // q12.3"]
["11759326_at",-0.16199279,0.12744331,-0.11464119,-0.0018322468,0.12744331,0.0018320084,0.74266934,0.40521318,-1.0660028,-0.09221129,1.0660028,"down","FAM123A",219287.0,"0007398 // ectoderm development // inferred from sequence or structural similarity /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from mutant phenotype","0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0005546 // phosphatidylinositol-4,5-bisphosphate binding // inferred from direct assay /// 0008289 // lipid binding // inferred from electronic annotation","chr13:25735821-25746425 (-) // 85.67 // q12.13"]
["11722245_a_at",-0.0935936,-0.02294445,-0.015001297,0.043325424,0.015001297,0.05091667,0.33905825,0.042232264,-1.0572093,-0.080260955,1.0572093,"down","PTDSS2",81490.0,"0006659 // phosphatidylserine biosynthetic process // inferred from electronic annotation /// 0008654 // phospholipid biosynthetic process // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from sequence or structural similarity /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003882 // CDP-diacylglycerol-serine O-phosphatidyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr11:450264-491399 (+) // 95.28 // p15.5"]
["11752601_x_at",-0.059702635,0.0748477,-0.040617704,-0.08486462,0.06522155,0.040617704,0.939099,0.81701064,-1.0107894,-0.015482432,1.0107894,"down","MRC1",4360.0,"0006897 // endocytosis // inferred from electronic annotation /// 0006898 // receptor-mediated endocytosis // inferred from direct assay","0005768 // endosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0010008 // endosome membrane // inferred from direct assay /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from direct assay /// 0004872 // receptor activity // inferred from electronic annotation /// 0005537 // mannose binding // traceable author statement /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr10:17851360-17895134 (+) // 84.42 // p12.33"]
["11718478_s_at",0.015992641,-0.015992641,-0.07489586,0.093412876,0.17446327,-0.057184696,0.64052653,0.26165015,-1.0682104,-0.095195785,1.0682104,"down","STAR",6770.0,"0006694 // steroid biosynthetic process // traceable author statement /// 0006694 // steroid biosynthetic process // inferred from electronic annotation /// 0006700 // C21-steroid hormone biosynthetic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // inferred from electronic annotation /// 0008202 // steroid metabolic process // traceable author statement /// 0008203 // cholesterol metabolic process // inferred from electronic annotation /// 0008211 // glucocorticoid metabolic process // inferred from electronic annotation /// 0030301 // cholesterol transport // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0050810 // regulation of steroid biosynthetic process // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005758 // mitochondrial intermembrane space // traceable author statement","0008289 // lipid binding // inferred from electronic annotation /// 0015485 // cholesterol binding // inferred from electronic annotation /// 0017127 // cholesterol transporter activity // inferred from electronic annotation","chr8:38000209-38008783 (-) // 82.05 // p11.23"]
["11731273_a_at",-0.0022537708,0.0022535324,-0.31896806,0.3287313,0.33025742,-0.03228855,0.49398455,0.12146878,-1.2442038,-0.31522283,1.2442038,"down","KCNE1",3753.0,"0002070 // epithelial cell maturation // inferred from electronic annotation /// 0006487 // protein N-linked glycosylation // inferred from direct assay /// 0006493 // protein O-linked glycosylation // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0006936 // muscle contraction // traceable author statement /// 0007605 // sensory perception of sound // traceable author statement /// 0008015 // blood circulation // non-traceable author statement /// 0008016 // regulation of heart contraction // inferred by curator /// 0008016 // regulation of heart contraction // traceable author statement /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0051899 // membrane depolarization // inferred from direct assay /// 0071435 // potassium ion export // inferred from direct assay /// 0071805 // potassium ion transmembrane transport // inferred from electronic annotation","0005764 // lysosome // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0008076 // voltage-gated potassium channel complex // inferred by curator /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005249 // voltage-gated potassium channel activity // inferred from electronic annotation /// 0005251 // delayed rectifier potassium channel activity // inferred from direct assay /// 0005251 // delayed rectifier potassium channel activity // inferred from electronic annotation /// 0005251 // delayed rectifier potassium channel activity // traceable author statement /// 0005267 // potassium channel activity // inferred from electronic annotation /// 0015459 // potassium channel regulator activity // inferred from direct assay /// 0015459 // potassium channel regulator activity // traceable author statement","chr21:35818987-35883616 (-) // 64.08 // q22.12"]
["11731054_s_at",-0.001657486,-0.03825283,-0.11601114,0.001657486,0.029870033,0.05826187,0.44797492,0.094111465,-1.0584136,-0.08190354,1.0584136,"down","FNIP1",96459.0,"0001932 // regulation of protein phosphorylation // inferred from direct assay /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr5:130977406-131132799 (-) // 93.89 // q31.1"]
["11730665_a_at",-0.026199818,0.006857872,0.026916027,-0.14837837,0.0026783943,-0.0026783943,0.7218375,0.3727923,1.0366898,0.051984213,1.0366898,"up","FOXP1",27086.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0002053 // positive regulation of mesenchymal cell proliferation // not recorded /// 0002053 // positive regulation of mesenchymal cell proliferation // inferred from electronic annotation /// 0002329 // pre-B cell differentiation // not recorded /// 0002329 // pre-B cell differentiation // inferred from electronic annotation /// 0002639 // positive regulation of immunoglobulin production // not recorded /// 0002639 // positive regulation of immunoglobulin production // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007389 // pattern specification process // not recorded /// 0007507 // heart development // inferred from electronic annotation /// 0007519 // skeletal muscle tissue development // not recorded /// 0007519 // skeletal muscle tissue development // inferred from electronic annotation /// 0008045 // motor axon guidance // inferred from electronic annotation /// 0009790 // embryo development // not recorded /// 0009790 // embryo development // inferred from electronic annotation /// 0021517 // ventral spinal cord development // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0033152 // immunoglobulin V(D)J recombination // not recorded /// 0033152 // immunoglobulin V(D)J recombination // inferred from electronic annotation /// 0045214 // sarcomere organization // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048745 // smooth muscle tissue development // not recorded /// 0048745 // smooth muscle tissue development // inferred from electronic annotation /// 0050679 // positive regulation of epithelial cell proliferation // inferred from electronic annotation /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // not recorded /// 0055007 // cardiac muscle cell differentiation // not recorded /// 0055007 // cardiac muscle cell differentiation // inferred from electronic annotation /// 0060043 // regulation of cardiac muscle cell proliferation // inferred from electronic annotation /// 0060501 // positive regulation of epithelial cell proliferation involved in lung morphogenesis // not recorded /// 0072358 // cardiovascular system development // inferred from electronic annotation /// 2000727 // positive regulation of cardiac muscle cell differentiation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // not recorded /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // not recorded","0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // not recorded /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // not recorded /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // not recorded /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008134 // transcription factor binding // not recorded /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008301 // DNA binding, bending // not recorded /// 0042803 // protein homodimerization activity // not recorded /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // not recorded /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr3:71247036-71630849 (-) // 82.82 // p13"]
["11743868_s_at",-0.033117056,0.033116817,-0.2739961,-0.11101627,0.3272543,0.1579895,0.62659764,0.24345735,-1.1615688,-0.21607456,1.1615688,"down","NGDN",25983.0,"0006417 // regulation of translation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0030175 // filopodium // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","","chr14:23938896-23948013 (+) // 99.05 // q11.2"]
["11726988_s_at",-0.0032701492,-0.021324158,0.038428307,0.017642021,-0.06493473,0.0032701492,0.8325546,0.56772727,1.0134574,0.019285472,1.0134574,"up","EIF2AK1",27102.0,"0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006418 // tRNA aminoacylation for protein translation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006950 // response to stress // inferred from expression pattern /// 0006950 // response to stress // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0009605 // response to external stimulus // inferred from expression pattern /// 0010467 // gene expression // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0017148 // negative regulation of translation // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0031398 // positive regulation of protein ubiquitination // inferred from electronic annotation /// 0045993 // negative regulation of translational initiation by iron // non-traceable author statement /// 0046777 // protein autophosphorylation // inferred from sequence or structural similarity /// 0046777 // protein autophosphorylation // inferred from electronic annotation /// 0046986 // negative regulation of hemoglobin biosynthetic process // inferred from sequence or structural similarity /// 0046986 // negative regulation of hemoglobin biosynthetic process // inferred from electronic annotation /// 0060510 // Type II pneumocyte differentiation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004694 // eukaryotic translation initiation factor 2alpha kinase activity // inferred from direct assay /// 0004694 // eukaryotic translation initiation factor 2alpha kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0020037 // heme binding // inferred from sequence or structural similarity /// 0020037 // heme binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from sequence or structural similarity /// 0042803 // protein homodimerization activity // inferred from electronic annotation","chr7:6061879-6098860 (-) // 92.26 // p22.1"]
["11724953_a_at",0.015172958,0.10866308,-0.03395796,0.04619932,-0.024919987,-0.015173435,0.8412517,0.58732677,1.019544,0.027924046,1.019544,"up","PDIK1L",149420.0,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr1:26438267-26452034 (+) // 95.35 // p36.11"]
["11726450_a_at",-0.099657536,0.061178207,-0.23334455,0.02362156,-0.02362156,0.03431225,0.67512274,0.3058178,-1.073294,-0.10204537,1.073294,"down","B3GAT1",27087.0,"0005975 // carbohydrate metabolic process // traceable author statement /// 0006486 // protein glycosylation // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0008499 // UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity // inferred from electronic annotation /// 0015018 // galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:134248397-134281812 (-) // 96.16 // q25"]
["11742045_a_at",-0.10467863,-0.16862798,0.102371216,-0.03416729,0.15110779,0.03416729,0.6969231,0.3351213,-1.077246,-0.107347675,1.077246,"down","PAK6",56924.0,"0000075 // cell cycle checkpoint // traceable author statement /// 0000087 // M phase of mitotic cell cycle // traceable author statement /// 0000236 // mitotic prometaphase // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006468 // protein phosphorylation // non-traceable author statement /// 0006468 // protein phosphorylation // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007010 // cytoskeleton organization // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007049 // cell cycle // non-traceable author statement /// 0007051 // spindle organization // non-traceable author statement /// 0007067 // mitosis // inferred from electronic annotation /// 0007067 // mitosis // non-traceable author statement /// 0007067 // mitosis // traceable author statement /// 0007091 // mitotic metaphase/anaphase transition // inferred from electronic annotation /// 0007093 // mitotic cell cycle checkpoint // traceable author statement /// 0007094 // mitotic cell cycle spindle assembly checkpoint // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0034501 // protein localization to kinetochore // inferred from physical interaction /// 0048015 // phosphatidylinositol-mediated signaling // non-traceable author statement /// 0051301 // cell division // inferred from electronic annotation /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from direct assay /// 0000776 // kinetochore // inferred from electronic annotation /// 0000776 // kinetochore // non-traceable author statement /// 0000776 // kinetochore // traceable author statement /// 0000777 // condensed chromosome kinetochore // inferred from direct assay /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0000940 // condensed chromosome outer kinetochore // inferred from direct assay /// 0000940 // condensed chromosome outer kinetochore // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005680 // anaphase-promoting complex // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0051233 // spindle midzone // non-traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004672 // protein kinase activity // non-traceable author statement /// 0004672 // protein kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr15:40509628-40569687 (+) // 97.38 // q15.1"]
["11723298_s_at",0.13331413,0.008068085,0.06228447,-0.025050163,-0.030852318,-0.008068085,0.41229478,0.07295904,1.0637892,0.08921236,1.0637892,"up","AKAP2 /// PALM2-AKAP2","11217 /// 445815","0008360 // regulation of cell shape // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0016301 // kinase activity // inferred from electronic annotation /// 0019899 // enzyme binding // non-traceable author statement","chr9:112542576-112934792 (+) // 95.72 // q31.3"]
["11749950_a_at",-0.03437519,-0.048858166,0.091174126,0.014520168,-0.014520168,0.014520168,0.98894,0.9638687,-1.0015213,-0.0021931748,1.0015213,"down","C3orf17",25871.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr3:112724022-112738511 (-) // 99.84 // q13.2"]
["11725879_a_at",0.040783882,0.0,0.00841856,-0.0227561,0.0,-0.0312562,0.4435661,0.09127252,1.0241343,0.034404885,1.0241343,"up","UBR2",23304.0,"0006342 // chromatin silencing // inferred from sequence or structural similarity /// 0006342 // chromatin silencing // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0007141 // male meiosis I // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0030163 // protein catabolic process // inferred from electronic annotation /// 0032007 // negative regulation of TOR signaling cascade // inferred from mutant phenotype /// 0033522 // histone H2A ubiquitination // inferred from sequence or structural similarity /// 0033522 // histone H2A ubiquitination // inferred from electronic annotation /// 0071233 // cellular response to leucine // inferred from direct assay","0000151 // ubiquitin ligase complex // inferred from electronic annotation /// 0000785 // chromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay","0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070728 // leucine binding // inferred from direct assay","chr6:42532057-42661242 (+) // 99.47 // p21.1"]
["11727312_at",0.03245592,-0.020889997,-0.18641281,0.020890236,-0.024633884,0.03810501,0.71764183,0.3662021,-1.0495247,-0.06973607,1.0495247,"down","BHLHE22",27319.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0060040 // retinal bipolar neuron differentiation // inferred from electronic annotation /// 0060042 // retina morphogenesis in camera-type eye // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","","chr8:65492521-65496186 (+) // 90.06 // q12.3"]
["11721077_a_at",0.010533333,0.0041236877,0.024041176,-0.044421196,-0.0041236877,-0.04601288,0.33537784,0.04077192,1.0312675,0.044418633,1.0312675,"up","ESD",2098.0,"","0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016023 // cytoplasmic membrane-bounded vesicle // non-traceable author statement /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0004091 // carboxylesterase activity // non-traceable author statement /// 0004091 // carboxylesterase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016788 // hydrolase activity, acting on ester bonds // inferred from electronic annotation /// 0018738 // S-formylglutathione hydrolase activity // inferred from electronic annotation /// 0047374 // methylumbelliferyl-acetate deacetylase activity // inferred from electronic annotation","chr13:47345394-47371367 (-) // 95.65 // q14.2"]
["11735547_at",0.0877378,-0.03445387,0.038193464,-0.06392765,0.03445387,-0.08328414,0.6324258,0.25180906,1.0483195,0.06807842,1.0483195,"up","SLC36A2",153201.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006865 // amino acid transport // traceable author statement /// 0006865 // amino acid transport // inferred from electronic annotation /// 0015808 // L-alanine transport // inferred from electronic annotation /// 0015816 // glycine transport // inferred from mutant phenotype /// 0015816 // glycine transport // inferred from electronic annotation /// 0015824 // proline transport // inferred from electronic annotation /// 0015992 // proton transport // inferred from electronic annotation /// 0035524 // proline transmembrane transport // inferred from mutant phenotype /// 0035524 // proline transmembrane transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005280 // hydrogen:amino acid symporter activity // inferred from electronic annotation /// 0015180 // L-alanine transmembrane transporter activity // inferred from electronic annotation /// 0015187 // glycine transmembrane transporter activity // inferred from mutant phenotype /// 0015187 // glycine transmembrane transporter activity // inferred from electronic annotation /// 0015193 // L-proline transmembrane transporter activity // inferred from electronic annotation","chr5:150694891-150727151 (-) // 66.15 // q33.1"]
["11751546_at",0.048113823,0.05975628,-0.048113823,-0.14756536,-0.15380955,0.07837677,0.68800056,0.32300514,1.0675114,0.09425153,1.0675114,"up","LOC729658",729658.0,"","","","chr6:163586445-163612840 (-) // 99.91 // q26"]
["11734139_a_at",0.04818964,0.33172035,-0.2179544,-0.04818964,0.14724445,-0.21795344,0.8697014,0.6489928,1.0670428,0.09361808,1.0670428,"up","TBC1D10C",374403.0,"0032313 // regulation of Rab GTPase activity // inferred from electronic annotation /// 0032851 // positive regulation of Rab GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005097 // Rab GTPase activator activity // inferred from electronic annotation","chr11:67171411-67177559 (+) // 95.24 // q13.2"]
["11725591_a_at",-0.06876612,-8.740425E-4,-0.22105742,8.740425E-4,0.07745552,0.058334827,0.47241238,0.10806637,-1.103781,-0.14245394,1.103781,"down","SPATA2",9825.0,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // non-traceable author statement /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay","","chr20:48314112-48530276 (-) // 94.5 // q13.13"]
["11755302_a_at",0.049267054,-0.09749794,-0.13912868,0.13346863,0.23304653,-0.049267054,0.55339074,0.16948496,-1.1236577,-0.16820261,1.1236577,"down","COL24A1",255631.0,"","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005581 // collagen // inferred from electronic annotation","0005201 // extracellular matrix structural constituent // inferred from electronic annotation","chr1:86196187-86622118 (-) // 99.46 // p22.3"]
["11762645_x_at",0.23488426,-0.18270779,-0.041723013,0.23049283,-0.127944,0.041722775,0.9313034,0.79484475,-1.0314015,-0.04460607,1.0314015,"down","","","","","","chr1:52834191-52835939 (+) // 50.23 // p32.3"]
["11757572_a_at",0.0021743774,-0.0021743774,0.10634899,0.013591766,-0.014559746,-0.027435303,0.66850555,0.2969331,1.0316241,0.044917352,1.0316241,"up","UBAC2",337867.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr13:100038242-100038682 (+) // 90.35 // q32.3"]
["11756981_s_at",-0.006504059,0.006503582,-0.09048128,0.083542824,-0.025230408,0.026174545,0.63303566,0.2530092,-1.0412546,-0.05832292,1.0412546,"down","HDAC7",51564.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001570 // vasculogenesis // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007043 // cell-cell junction assembly // inferred from electronic annotation /// 0007219 // Notch signaling pathway // traceable author statement /// 0016568 // chromatin modification // inferred from electronic annotation /// 0016575 // histone deacetylation // inferred from electronic annotation /// 0032703 // negative regulation of interleukin-2 production // inferred from direct assay /// 0045668 // negative regulation of osteoblast differentiation // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0090050 // positive regulation of cell migration involved in sprouting angiogenesis // inferred from mutant phenotype","0000118 // histone deacetylase complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0003682 // chromatin binding // inferred from electronic annotation /// 0003714 // transcription corepressor activity // inferred from electronic annotation /// 0004407 // histone deacetylase activity // inferred from electronic annotation /// 0005080 // protein kinase C binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0031078 // histone deacetylase activity (H3-K14 specific) // inferred from electronic annotation /// 0032041 // NAD-dependent histone deacetylase activity (H3-K14 specific) // inferred from electronic annotation /// 0032129 // histone deacetylase activity (H3-K9 specific) // inferred from electronic annotation /// 0033613 // activating transcription factor binding // inferred from physical interaction /// 0034739 // histone deacetylase activity (H4-K16 specific) // inferred from electronic annotation /// 0046969 // NAD-dependent histone deacetylase activity (H3-K9 specific) // inferred from electronic annotation /// 0046970 // NAD-dependent histone deacetylase activity (H4-K16 specific) // inferred from electronic annotation /// 0070491 // repressing transcription factor binding // inferred from physical interaction /// 0071889 // 14-3-3 protein binding // inferred from direct assay","chr12:48177317-48185750 (-) // 100.0 // q13.11"]
["11735838_a_at",0.12101078,0.07416344,-0.15110254,-0.2046299,0.022735596,-0.022735596,0.79255426,0.48926333,1.0591453,0.08290056,1.0591453,"up","MADCAM1",8174.0,"0002687 // positive regulation of leukocyte migration // inferred from electronic annotation /// 0006955 // immune response // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007568 // aging // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0030216 // keratinocyte differentiation // inferred from electronic annotation /// 0050776 // regulation of immune response // traceable author statement /// 0050900 // leukocyte migration // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr19:496453-505342 (+) // 72.07 // p13.3"]
["11739032_x_at",-0.047759056,-0.014803886,0.060329437,0.014803886,0.12311745,-0.032055855,0.8266169,0.55487674,-1.0252907,-0.036033053,1.0252907,"down","ACTR2",10097.0,"0006928 // cellular component movement // traceable author statement /// 0007163 // establishment or maintenance of cell polarity // inferred from electronic annotation /// 0008356 // asymmetric cell division // inferred from electronic annotation /// 0016482 // cytoplasmic transport // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0033206 // cytokinesis after meiosis // inferred from electronic annotation /// 0051321 // meiotic cell cycle // inferred from electronic annotation /// 0051653 // spindle localization // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005885 // Arp2/3 protein complex // inferred from reviewed computational analysis /// 0005885 // Arp2/3 protein complex // traceable author statement /// 0005938 // cell cortex // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement /// 0030478 // actin cap // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003779 // actin binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation","chr2:65454828-65498385 (+) // 98.65 // p14"]
["11715226_s_at",0.090180874,0.033346653,-0.033346653,-0.1418724,0.21159506,-0.10442448,0.9096544,0.741332,1.0292743,0.04162757,1.0292743,"up","PCDHA6",56142.0,"0007155 // cell adhesion // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr5:140207649-140210088 (+) // 100.0 // q31.3"]
["11732650_a_at",0.005402565,0.012496948,-0.25327158,-0.005402565,0.02428627,-0.1809721,0.9448716,0.8327224,-1.0170763,-0.024427846,1.0170763,"down","HEXDC",284004.0,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004553 // hydrolase activity, hydrolyzing O-glycosyl compounds // inferred from electronic annotation /// 0004563 // beta-N-acetylhexosaminidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity, acting on glycosyl bonds // inferred from electronic annotation /// 0043169 // cation binding // inferred from electronic annotation","chr17:80376193-80400515 (+) // 87.06 // q25.3"]
["11725040_at",-0.18550682,-0.17639542,-0.07082224,0.070822716,0.27127266,0.08692026,0.24796441,0.017886369,-1.2203091,-0.28724667,1.2203091,"down","FGF2",2247.0,"0000186 // activation of MAPKK activity // inferred from electronic annotation /// 0000187 // activation of MAPK activity // traceable author statement /// 0000189 // MAPK import into nucleus // inferred from electronic annotation /// 0001525 // angiogenesis // inferred from electronic annotation /// 0001658 // branching involved in ureteric bud morphogenesis // inferred from direct assay /// 0001759 // organ induction // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from electronic annotation /// 0001938 // positive regulation of endothelial cell proliferation // inferred from mutant phenotype /// 0001938 // positive regulation of endothelial cell proliferation // inferred from electronic annotation /// 0002042 // cell migration involved in sprouting angiogenesis // inferred from direct assay /// 0002042 // cell migration involved in sprouting angiogenesis // inferred from genetic interaction /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006661 // phosphatidylinositol biosynthetic process // inferred from direct assay /// 0006700 // C21-steroid hormone biosynthetic process // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006935 // chemotaxis // traceable author statement /// 0007165 // signal transduction // non-traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007243 // intracellular protein kinase cascade // inferred from electronic annotation /// 0007265 // Ras protein signal transduction // traceable author statement /// 0007268 // synaptic transmission // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from genetic interaction /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from direct assay /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from genetic interaction /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from physical interaction /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0009887 // organ morphogenesis // traceable author statement /// 0010001 // glial cell differentiation // inferred from electronic annotation /// 0010595 // positive regulation of endothelial cell migration // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0010764 // negative regulation of fibroblast migration // inferred from direct assay /// 0010863 // positive regulation of phospholipase C activity // inferred from direct assay /// 0017158 // regulation of calcium ion-dependent exocytosis // inferred from electronic annotation /// 0021762 // substantia nigra development // inferred from electronic annotation /// 0021940 // positive regulation of cerebellar granule cell precursor proliferation // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030214 // hyaluronan catabolic process // inferred from direct assay /// 0030308 // negative regulation of cell growth // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0032958 // inositol phosphate biosynthetic process // inferred from direct assay /// 0042060 // wound healing // traceable author statement /// 0042060 // wound healing // inferred from electronic annotation /// 0042660 // positive regulation of cell fate specification // inferred from direct assay /// 0043536 // positive regulation of blood vessel endothelial cell migration // inferred from direct assay /// 0043537 // negative regulation of blood vessel endothelial cell migration // inferred from direct assay /// 0043552 // positive regulation of phosphatidylinositol 3-kinase activity // inferred from direct assay /// 0045597 // positive regulation of cell differentiation // inferred from electronic annotation /// 0045669 // positive regulation of osteoblast differentiation // inferred from electronic annotation /// 0045765 // regulation of angiogenesis // traceable author statement /// 0045766 // positive regulation of angiogenesis // inferred from direct assay /// 0045766 // positive regulation of angiogenesis // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046668 // regulation of retinal cell programmed cell death // inferred from electronic annotation /// 0048598 // embryonic morphogenesis // traceable author statement /// 0048678 // response to axon injury // inferred from electronic annotation /// 0048864 // stem cell development // inferred from electronic annotation /// 0050679 // positive regulation of epithelial cell proliferation // inferred from electronic annotation /// 0050918 // positive chemotaxis // inferred from direct assay /// 0051209 // release of sequestered calcium ion into cytosol // inferred from direct assay /// 0051726 // regulation of cell cycle // inferred from electronic annotation /// 0051781 // positive regulation of cell division // inferred from electronic annotation /// 0051925 // regulation of calcium ion transport via voltage-gated calcium channel activity // inferred from electronic annotation /// 0060045 // positive regulation of cardiac muscle cell proliferation // inferred from direct assay /// 0060128 // corticotropin hormone secreting cell differentiation // inferred from electronic annotation /// 0060129 // thyroid-stimulating hormone-secreting cell differentiation // inferred from electronic annotation /// 0060548 // negative regulation of cell death // inferred from direct assay /// 0060591 // chondroblast differentiation // inferred from direct assay /// 0060644 // mammary gland epithelial cell differentiation // inferred from electronic annotation /// 0061045 // negative regulation of wound healing // inferred from direct assay /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from direct assay","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation","0005104 // fibroblast growth factor receptor binding // inferred from physical interaction /// 0005104 // fibroblast growth factor receptor binding // inferred from electronic annotation /// 0005125 // cytokine activity // inferred from direct assay /// 0005245 // voltage-gated calcium channel activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // inferred from direct assay /// 0008083 // growth factor activity // inferred from electronic annotation /// 0008083 // growth factor activity // traceable author statement /// 0008201 // heparin binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0017134 // fibroblast growth factor binding // inferred from electronic annotation /// 0030374 // ligand-dependent nuclear receptor transcription coactivator activity // inferred from direct assay /// 0042056 // chemoattractant activity // inferred from direct assay","chr4:123747862-123819379 (+) // 88.23 // q27"]
["11726258_at",-0.14987421,-0.026060104,-0.08694172,0.20016146,0.026060104,0.109947205,0.30546755,0.031755734,-1.1484449,-0.19968162,1.1484449,"down","RNF141",50862.0,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","","0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:10533221-10562778 (-) // 89.14 // p15.4"]
["11718128_x_at",0.05796337,0.014652252,0.06410885,-0.08636093,-0.014652252,-0.10892582,0.27265808,0.023454528,1.0833913,0.11555442,1.0833913,"up","TK1",7083.0,"0006139 // nucleobase-containing compound metabolic process // traceable author statement /// 0006206 // pyrimidine base metabolic process // traceable author statement /// 0006260 // DNA replication // inferred from electronic annotation /// 0009165 // nucleotide biosynthetic process // not recorded /// 0016310 // phosphorylation // inferred from electronic annotation /// 0043097 // pyrimidine nucleoside salvage // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051289 // protein homotetramerization // inferred from physical interaction /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0004797 // thymidine kinase activity // inferred from electronic annotation /// 0004797 // thymidine kinase activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from direct assay /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0019206 // nucleoside kinase activity // not recorded /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:76169995-76183314 (-) // 90.46 // q25.3"]
["11717603_a_at",0.04408312,-0.0373497,0.075062275,-0.13414335,0.037350178,-0.08234167,0.6121832,0.22610703,1.0621421,0.08697683,1.0621421,"up","SECISBP2",79048.0,"0006412 // translation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay","0003723 // RNA binding // inferred from electronic annotation /// 0003730 // mRNA 3'-UTR binding // inferred from direct assay /// 0003730 // mRNA 3'-UTR binding // inferred from electronic annotation","chr9:91933387-91974557 (+) // 91.58 // q22.2"]
["11756653_x_at",0.010924339,-0.010924339,-0.021143913,0.27092338,-0.04006338,0.138165,0.6103132,0.22443017,-1.0943364,-0.13005628,1.0943364,"down","FGF1",2246.0,"0001525 // angiogenesis // inferred from electronic annotation /// 0001759 // organ induction // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0007243 // intracellular protein kinase cascade // inferred from electronic annotation /// 0007275 // multicellular organismal development // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from genetic interaction /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from direct assay /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from genetic interaction /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from physical interaction /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0010740 // positive regulation of intracellular protein kinase cascade // inferred from direct assay /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0034605 // cellular response to heat // inferred from direct assay /// 0045542 // positive regulation of cholesterol biosynthetic process // inferred from direct assay /// 0045766 // positive regulation of angiogenesis // inferred from direct assay /// 0045785 // positive regulation of cell adhesion // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0050679 // positive regulation of epithelial cell proliferation // inferred from electronic annotation /// 0051781 // positive regulation of cell division // inferred from direct assay /// 0051781 // positive regulation of cell division // inferred from electronic annotation /// 0060681 // branch elongation involved in ureteric bud branching // inferred from direct assay /// 0072163 // mesonephric epithelium development // inferred from direct assay","0005576 // extracellular region // inferred from direct assay /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005938 // cell cortex // inferred from electronic annotation","0005104 // fibroblast growth factor receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // inferred from direct assay /// 0008083 // growth factor activity // inferred from electronic annotation /// 0008083 // growth factor activity // traceable author statement /// 0008201 // heparin binding // inferred from direct assay /// 0008201 // heparin binding // inferred from electronic annotation /// 0044548 // S100 protein binding // inferred from physical interaction","chr5:141974795-142077635 (-) // 99.9 // q31.3"]
["11755393_a_at",-0.030189514,-0.0027327538,-0.038226128,0.014672756,0.073125124,0.0027327538,0.442014,0.09045009,-1.0380623,-0.053893078,1.0380623,"down","HHLA2",11148.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr3:108015341-108097127 (+) // 84.67 // q13.13"]
["11723231_s_at",-0.0039076805,-0.015367985,0.122041225,0.0039072037,0.19689512,-0.0233531,0.92504936,0.7768767,-1.0174053,-0.024894474,1.0174053,"down","RNF138 /// RNF138P1","379013 /// 51444","0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr18:29671843-29711523 (+) // 95.8 // q12.1"]
["11755407_s_at",0.06574535,0.15331411,-0.26396775,0.15331411,-0.19006324,-0.06574535,0.97201985,0.91134113,1.0133941,0.01919536,1.0133941,"up","OR7A5",26659.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // non-traceable author statement /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // non-traceable author statement /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // non-traceable author statement /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr19:14938093-14945960 (-) // 99.71 // p13.12"]
["11739781_a_at",0.115707874,0.03140974,-0.033508778,-0.055457115,-0.03140974,0.034123898,0.6976606,0.33652115,1.0391836,0.055450592,1.0391836,"up","TGM2",7052.0,"0001974 // blood vessel remodeling // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0007200 // phospholipase C-activating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0018149 // peptide cross-linking // inferred from electronic annotation /// 0018153 // isopeptide cross-linking via N6-(L-isoglutamyl)-L-lysine // inferred from electronic annotation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from electronic annotation /// 0043277 // apoptotic cell clearance // inferred from direct assay /// 0045785 // positive regulation of cell adhesion // inferred from sequence or structural similarity /// 0045785 // positive regulation of cell adhesion // inferred from electronic annotation /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from electronic annotation /// 0050729 // positive regulation of inflammatory response // inferred from electronic annotation /// 0051260 // protein homooligomerization // inferred from electronic annotation /// 0051482 // elevation of cytosolic calcium ion concentration involved in phospholipase C-activating G-protein coupled signaling pathway // inferred from electronic annotation /// 0060445 // branching involved in salivary gland morphogenesis // inferred from electronic annotation /// 0060662 // salivary gland cavitation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation","0003810 // protein-glutamine gamma-glutamyltransferase activity // inferred from sequence or structural similarity /// 0003810 // protein-glutamine gamma-glutamyltransferase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr20:36766350-36793674 (-) // 89.72 // q11.23"]
["11718884_s_at",-0.11946964,-0.08837414,0.006342888,0.040424347,0.043456078,-0.006342888,0.4357695,0.086518705,-1.0665952,-0.093012735,1.0665952,"down","ARL5A",26225.0,"0007264 // small GTPase mediated signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation","chr2:152657492-152685043 (-) // 96.21 // q23.3"]
["11759009_at",0.24965048,0.024888039,-0.039191246,0.07995319,-0.03143716,-0.024888277,0.79652977,0.49762812,1.0501338,0.07057319,1.0501338,"up","CA1",759.0,"0006730 // one-carbon metabolic process // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay","0004089 // carbonate dehydratase activity // inferred from electronic annotation /// 0004089 // carbonate dehydratase activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:86239836-86291243 (-) // 68.09 // q21.2"]
["11717127_a_at",-0.0095329285,-0.059336662,0.0095329285,-0.050005913,0.034475327,0.015158653,0.8377156,0.58110195,-1.0137169,-0.019654859,1.0137169,"down","ANPEP",290.0,"0001525 // angiogenesis // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0006725 // cellular aromatic compound metabolic process // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0035814 // negative regulation of renal sodium excretion // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation","0005625 // soluble fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0012506 // vesicle membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031983 // vesicle lumen // inferred from electronic annotation","0004177 // aminopeptidase activity // inferred from electronic annotation /// 0004177 // aminopeptidase activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0004872 // receptor activity // traceable author statement /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042277 // peptide binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr15:90328125-90350040 (-) // 91.97 // q26.1"]
["11716630_a_at",0.026541233,0.08700991,0.1561594,-0.06380129,-0.063391685,-0.026541233,0.2712968,0.023174025,1.1027825,0.14114825,1.1027825,"up","ANGPTL4",51129.0,"0001525 // angiogenesis // inferred from electronic annotation /// 0001666 // response to hypoxia // non-traceable author statement /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043086 // negative regulation of catalytic activity // inferred from sequence or structural similarity /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045766 // positive regulation of angiogenesis // traceable author statement /// 0051005 // negative regulation of lipoprotein lipase activity // inferred from direct assay /// 0051005 // negative regulation of lipoprotein lipase activity // inferred from electronic annotation /// 0051260 // protein homooligomerization // inferred from electronic annotation /// 0070328 // triglyceride homeostasis // inferred from sequence or structural similarity /// 0070328 // triglyceride homeostasis // inferred from electronic annotation","0005576 // extracellular region // inferred from direct assay /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation","0004857 // enzyme inhibitor activity // inferred from sequence or structural similarity /// 0004857 // enzyme inhibitor activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr19:8428547-8439254 (+) // 70.68 // p13.2"]
["11725285_a_at",0.0055537224,-0.0041851997,0.13963604,-0.019205093,0.0041851997,-0.039531708,0.62922454,0.24675207,1.0462193,0.06518535,1.0462193,"up","ANKS6",203286.0,"","0005737 // cytoplasm // inferred from electronic annotation","0042803 // protein homodimerization activity // inferred from electronic annotation","chr9:101494290-101558824 (-) // 80.41 // q22.33"]
["11732495_at",0.0071411133,-0.051130295,-0.014155388,-0.00714159,0.097789764,0.0603199,0.4883249,0.11804028,-1.0495015,-0.06970428,1.0495015,"down","C1orf135",79000.0,"","","","chr1:26160499-26185950 (-) // 84.85 // p36.11"]
["11749552_a_at",0.25134444,-0.010220051,-0.22885656,0.08295107,-0.12501025,0.010220051,0.97721744,0.927402,1.0102429,0.014702268,1.0102429,"up","LAMP3",27074.0,"0008283 // cell proliferation // traceable author statement","0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005765 // lysosomal membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr3:182841533-182879803 (-) // 95.26 // q27.1"]
["11752386_a_at",-0.010249138,-0.05360794,0.12696123,0.010249138,-0.03276968,0.09518576,0.98894,0.9638799,-1.0022116,-0.0031870992,1.0022116,"down","NAB1",4664.0,"0001958 // endochondral ossification // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0014037 // Schwann cell differentiation // inferred from electronic annotation /// 0042552 // myelination // inferred from electronic annotation /// 0045682 // regulation of epidermis development // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // non-traceable author statement /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0008134 // transcription factor binding // inferred from electronic annotation","chr2:191513995-191555645 (+) // 99.95 // q32.2"]
["11755229_x_at",0.018092155,0.06586838,0.24075699,-0.018092155,-0.06994343,-0.06449127,0.4330421,0.08441124,1.116576,0.1590814,1.116576,"up","ENGASE",64772.0,"0008152 // metabolic process // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation","0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity, acting on glycosyl bonds // inferred from electronic annotation /// 0033925 // mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity // inferred from electronic annotation","chr17:77073509-77084679 (+) // 93.17 // q25.3"]
["11727761_at",-0.03920698,0.095421314,-0.06735897,0.03920698,-0.10443497,0.0822773,0.97051257,0.9070146,-1.0065354,-0.009397929,1.0065354,"down","PALM3",342979.0,"0001960 // negative regulation of cytokine-mediated signaling pathway // inferred from direct assay /// 0008063 // Toll signaling pathway // inferred from mutant phenotype /// 0032496 // response to lipopolysaccharide // inferred from direct assay","0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation","chr19:14164178-14168401 (-) // 92.39 // p13.12"]
["11718772_at",-0.016940117,0.030467987,0.22013474,-0.03245926,0.016940117,-0.0780983,0.6167138,0.23175637,1.0785502,0.10909335,1.0785502,"up","SMARCE1",6605.0,"0006337 // nucleosome disassembly // inferred from direct assay /// 0006337 // nucleosome disassembly // traceable author statement /// 0006338 // chromatin remodeling // inferred from direct assay /// 0006357 // regulation of transcription from RNA polymerase II promoter // non-traceable author statement /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay","0000228 // nuclear chromosome // traceable author statement /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0016514 // SWI/SNF complex // inferred from direct assay /// 0016514 // SWI/SNF complex // inferred from electronic annotation /// 0017053 // transcriptional repressor complex // inferred from physical interaction /// 0071564 // npBAF complex // inferred from sequence or structural similarity /// 0071564 // npBAF complex // inferred from electronic annotation /// 0071565 // nBAF complex // inferred from sequence or structural similarity /// 0071565 // nBAF complex // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // traceable author statement /// 0003713 // transcription coactivator activity // non-traceable author statement /// 0003713 // transcription coactivator activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008080 // N-acetyltransferase activity // inferred from direct assay /// 0016922 // ligand-dependent nuclear receptor binding // inferred from physical interaction /// 0047485 // protein N-terminus binding // inferred from physical interaction","chr17:38783533-38804844 (-) // 98.28 // q21.2"]
["11760024_x_at",-0.085338116,-0.063182354,-0.0632453,0.06318188,0.10598087,0.16972542,0.14908956,0.004483089,-1.135676,-0.18355134,1.135676,"down","VPS29",51699.0,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0004647 // phosphoserine phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016788 // hydrolase activity, acting on ester bonds // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:110938573-110939944 (-) // 62.31 // q24.11"]
["11724687_a_at",-0.021885633,0.17077446,-0.04903269,0.17558455,0.0034680367,-0.0034680367,0.9311353,0.7944505,-1.017651,-0.025242824,1.017651,"down","PCSK5",5125.0,"0001822 // kidney development // inferred from mutant phenotype /// 0001822 // kidney development // inferred from sequence or structural similarity /// 0002001 // renin secretion into blood stream // inferred from expression pattern /// 0006465 // signal peptide processing // inferred from direct assay /// 0006508 // proteolysis // inferred from electronic annotation /// 0007267 // cell-cell signaling // traceable author statement /// 0007507 // heart development // inferred from sequence or structural similarity /// 0007565 // female pregnancy // inferred from electronic annotation /// 0007566 // embryo implantation // inferred from sequence or structural similarity /// 0009952 // anterior/posterior pattern specification // inferred from mutant phenotype /// 0016485 // protein processing // inferred from direct assay /// 0016486 // peptide hormone processing // inferred from direct assay /// 0019067 // viral assembly, maturation, egress, and release // inferred from expression pattern /// 0019067 // viral assembly, maturation, egress, and release // inferred from sequence or structural similarity /// 0030323 // respiratory tube development // inferred from sequence or structural similarity /// 0032455 // nerve growth factor processing // traceable author statement /// 0035108 // limb morphogenesis // inferred from sequence or structural similarity /// 0042089 // cytokine biosynthetic process // inferred from sequence or structural similarity /// 0043043 // peptide biosynthetic process // inferred from direct assay /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048566 // embryonic digestive tract development // inferred from mutant phenotype /// 0048566 // embryonic digestive tract development // inferred from sequence or structural similarity /// 0048706 // embryonic skeletal system development // inferred from mutant phenotype /// 0048706 // embryonic skeletal system development // inferred from sequence or structural similarity","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // not recorded /// 0005615 // extracellular space // inferred from sequence or structural similarity /// 0005794 // Golgi apparatus // inferred from sequence or structural similarity /// 0005796 // Golgi lumen // traceable author statement /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030141 // secretory granule // inferred from sequence or structural similarity","0004252 // serine-type endopeptidase activity // inferred from direct assay /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042277 // peptide binding // inferred from sequence or structural similarity","chr9:78505516-78810805 (+) // 97.23 // q21.13"]
["11737042_s_at",-0.20257378,-0.25599194,-0.01585579,0.01585579,0.065112114,0.034098625,0.3782694,0.057090767,-1.1459118,-0.19649602,1.1459118,"down","PHLDB2",90102.0,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0016042 // lipid catabolic process // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0045111 // intermediate filament cytoskeleton // inferred from direct assay","0004629 // phospholipase C activity // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0008081 // phosphoric diester hydrolase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr3:111578567-111695362 (+) // 99.26 // q13.2"]
["11747364_x_at",0.07262659,0.026900768,-0.026900768,-0.15443516,0.04752159,-0.19186687,0.5813934,0.19537503,1.0896028,0.12380235,1.0896028,"up","CYBASC3",220002.0,"0006810 // transport // inferred from electronic annotation /// 0022900 // electron transport chain // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031902 // late endosome membrane // inferred from electronic annotation","0016491 // oxidoreductase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:61117597-61124643 (-) // 85.21 // q12.2"]
["11753348_a_at",0.020126343,0.12684846,-0.020126581,-0.085878134,-0.026130438,0.02818656,0.64640695,0.26960778,1.0498793,0.070223495,1.0498793,"up","SAMSN1",64092.0,"0002820 // negative regulation of adaptive immune response // inferred from sequence or structural similarity /// 0002820 // negative regulation of adaptive immune response // inferred from electronic annotation /// 0050732 // negative regulation of peptidyl-tyrosine phosphorylation // inferred from sequence or structural similarity /// 0050732 // negative regulation of peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0050869 // negative regulation of B cell activation // inferred from sequence or structural similarity /// 0050869 // negative regulation of B cell activation // inferred from electronic annotation","0001726 // ruffle // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0001784 // phosphotyrosine binding // inferred from direct assay","chr21:15857954-15918662 (-) // 96.93 // q11.2"]
["11754010_x_at",4.77314E-4,-0.094528675,0.1229949,0.043787956,-0.009689331,-4.7683716E-4,0.99458206,0.9820334,-1.0010815,-0.0015593836,1.0010815,"down","GOLGA2",2801.0,"","0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005794 // Golgi apparatus // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr9:131019159-131038318 (-) // 92.44 // q34.11"]
["11727247_x_at",0.015810013,0.0,-0.052038193,0.0,0.08339834,-0.01581049,0.74119294,0.40230638,-1.0242766,-0.03460538,1.0242766,"down","CHRNB1",1140.0,"0001941 // postsynaptic membrane organization // inferred from mutant phenotype /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // inferred from mutant phenotype /// 0006936 // muscle contraction // inferred from mutant phenotype /// 0007165 // signal transduction // inferred from mutant phenotype /// 0007271 // synaptic transmission, cholinergic // inferred from mutant phenotype /// 0007274 // neuromuscular synaptic transmission // inferred from mutant phenotype /// 0035095 // behavioral response to nicotine // inferred from mutant phenotype /// 0042391 // regulation of membrane potential // inferred from sequence or structural similarity /// 0048747 // muscle fiber development // inferred from mutant phenotype /// 0050877 // neurological system process // inferred from mutant phenotype","0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0005892 // acetylcholine-gated channel complex // inferred from mutant phenotype /// 0005892 // acetylcholine-gated channel complex // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0045202 // synapse // inferred from mutant phenotype /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004889 // acetylcholine-activated cation-selective channel activity // inferred from sequence or structural similarity /// 0004889 // acetylcholine-activated cation-selective channel activity // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005230 // extracellular ligand-gated ion channel activity // inferred from electronic annotation /// 0015267 // channel activity // inferred from mutant phenotype /// 0015276 // ligand-gated ion channel activity // inferred from sequence or structural similarity /// 0015276 // ligand-gated ion channel activity // inferred from electronic annotation /// 0015464 // acetylcholine receptor activity // inferred from mutant phenotype /// 0042166 // acetylcholine binding // inferred from sequence or structural similarity /// 0042166 // acetylcholine binding // inferred from electronic annotation","chr17:7348379-7361028 (+) // 77.12 // p13.1"]
["11717887_s_at",-0.0065402985,0.024951935,0.005208969,7.90596E-4,-7.90596E-4,-0.004483223,0.7212201,0.37170038,1.0065145,0.009368027,1.0065145,"up","PTPN12",5782.0,"0006470 // protein dephosphorylation // traceable author statement /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation","0002102 // podosome // inferred from electronic annotation /// 0005625 // soluble fraction // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0030054 // cell junction // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0004726 // non-membrane spanning protein tyrosine phosphatase activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from physical interaction","chr7:77166693-77269386 (+) // 94.7 // q11.23"]
["11746635_a_at",-0.02980423,0.04863596,-0.21559882,0.097893,-0.12851429,0.029803991,0.82951593,0.5609231,-1.0463145,-0.06531653,1.0463145,"down","LEF1",51176.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001569 // patterning of blood vessels // not recorded /// 0001569 // patterning of blood vessels // inferred from electronic annotation /// 0001649 // osteoblast differentiation // inferred from expression pattern /// 0001755 // neural crest cell migration // not recorded /// 0001756 // somitogenesis // not recorded /// 0001756 // somitogenesis // inferred from electronic annotation /// 0001822 // kidney development // inferred from electronic annotation /// 0001837 // epithelial to mesenchymal transition // inferred from sequence or structural similarity /// 0001837 // epithelial to mesenchymal transition // inferred from electronic annotation /// 0001944 // vasculature development // inferred from electronic annotation /// 0002040 // sprouting angiogenesis // not recorded /// 0002040 // sprouting angiogenesis // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006917 // induction of apoptosis // not recorded /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007420 // brain development // not recorded /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0010226 // response to lithium ion // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from direct assay /// 0010718 // positive regulation of epithelial to mesenchymal transition // inferred from mutant phenotype /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0016055 // Wnt receptor signaling pathway // inferred from direct assay /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0016202 // regulation of striated muscle tissue development // not recorded /// 0021542 // dentate gyrus development // not recorded /// 0021542 // dentate gyrus development // inferred from electronic annotation /// 0021766 // hippocampus development // inferred from electronic annotation /// 0021854 // hypothalamus development // not recorded /// 0021861 // forebrain radial glial cell differentiation // not recorded /// 0021861 // forebrain radial glial cell differentiation // inferred from electronic annotation /// 0021873 // forebrain neuroblast division // not recorded /// 0021873 // forebrain neuroblast division // inferred from electronic annotation /// 0021879 // forebrain neuron differentiation // not recorded /// 0021943 // formation of radial glial scaffolds // not recorded /// 0021943 // formation of radial glial scaffolds // inferred from electronic annotation /// 0022008 // neurogenesis // not recorded /// 0022407 // regulation of cell-cell adhesion // inferred from electronic annotation /// 0022408 // negative regulation of cell-cell adhesion // inferred from direct assay /// 0022409 // positive regulation of cell-cell adhesion // inferred from direct assay /// 0030111 // regulation of Wnt receptor signaling pathway // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030223 // neutrophil differentiation // inferred from mutant phenotype /// 0030307 // positive regulation of cell growth // inferred from mutant phenotype /// 0030326 // embryonic limb morphogenesis // not recorded /// 0030326 // embryonic limb morphogenesis // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0030335 // positive regulation of cell migration // inferred from mutant phenotype /// 0030509 // BMP signaling pathway // not recorded /// 0030509 // BMP signaling pathway // inferred from electronic annotation /// 0030854 // positive regulation of granulocyte differentiation // inferred from direct assay /// 0030879 // mammary gland development // not recorded /// 0030879 // mammary gland development // inferred from electronic annotation /// 0031100 // organ regeneration // inferred from electronic annotation /// 0032696 // negative regulation of interleukin-13 production // inferred from direct assay /// 0032713 // negative regulation of interleukin-4 production // inferred from direct assay /// 0032714 // negative regulation of interleukin-5 production // inferred from direct assay /// 0033153 // T cell receptor V(D)J recombination // inferred from electronic annotation /// 0042100 // B cell proliferation // not recorded /// 0042100 // B cell proliferation // inferred from electronic annotation /// 0042475 // odontogenesis of dentin-containing tooth // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from mutant phenotype /// 0043392 // negative regulation of DNA binding // inferred from direct assay /// 0043586 // tongue development // inferred from electronic annotation /// 0043588 // skin development // inferred from electronic annotation /// 0043923 // positive regulation by host of viral transcription // inferred from direct assay /// 0043966 // histone H3 acetylation // inferred from mutant phenotype /// 0043967 // histone H4 acetylation // inferred from mutant phenotype /// 0045063 // T-helper 1 cell differentiation // inferred from sequence or structural similarity /// 0045063 // T-helper 1 cell differentiation // inferred from electronic annotation /// 0045843 // negative regulation of striated muscle tissue development // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046632 // alpha-beta T cell differentiation // not recorded /// 0046632 // alpha-beta T cell differentiation // inferred from electronic annotation /// 0048069 // eye pigmentation // not recorded /// 0048341 // paraxial mesoderm formation // not recorded /// 0048341 // paraxial mesoderm formation // inferred from electronic annotation /// 0048468 // cell development // inferred from electronic annotation /// 0048699 // generation of neurons // not recorded /// 0048747 // muscle fiber development // not recorded /// 0050909 // sensory perception of taste // inferred from electronic annotation /// 0060021 // palate development // inferred from sequence or structural similarity /// 0060021 // palate development // inferred from electronic annotation /// 0060033 // anatomical structure regression // inferred from electronic annotation /// 0060070 // canonical Wnt receptor signaling pathway // inferred from direct assay /// 0060070 // canonical Wnt receptor signaling pathway // inferred from mutant phenotype /// 0060325 // face morphogenesis // not recorded /// 0060325 // face morphogenesis // inferred from electronic annotation /// 0060326 // cell chemotaxis // inferred from direct assay /// 0060561 // apoptotic process involved in morphogenesis // not recorded /// 0060561 // apoptotic process involved in morphogenesis // inferred from electronic annotation /// 0060710 // chorio-allantoic fusion // not recorded /// 0060710 // chorio-allantoic fusion // inferred from electronic annotation /// 0061153 // trachea gland development // not recorded /// 0061153 // trachea gland development // inferred from electronic annotation /// 0071353 // cellular response to interleukin-4 // inferred from direct assay /// 0071864 // positive regulation of cell proliferation in bone marrow // inferred from mutant phenotype /// 0071866 // negative regulation of apoptotic process in bone marrow // inferred from mutant phenotype /// 0071895 // odontoblast differentiation // not recorded /// 0071899 // negative regulation of estrogen receptor binding // inferred from direct assay /// 0090068 // positive regulation of cell cycle process // inferred from direct assay /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from mutant phenotype","0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from direct assay /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0032993 // protein-DNA complex // inferred from direct assay","0003677 // DNA binding // inferred from sequence or structural similarity /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // not recorded /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // not recorded /// 0005515 // protein binding // inferred from physical interaction /// 0008013 // beta-catenin binding // inferred from physical interaction /// 0008013 // beta-catenin binding // traceable author statement /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0008301 // DNA binding, bending // inferred from sequence or structural similarity /// 0008301 // DNA binding, bending // inferred from electronic annotation /// 0030284 // estrogen receptor activity // inferred from direct assay /// 0030331 // estrogen receptor binding // inferred from direct assay /// 0035326 // enhancer binding // inferred from direct assay /// 0042393 // histone binding // inferred from physical interaction /// 0043027 // cysteine-type endopeptidase inhibitor activity involved in apoptotic process // inferred from mutant phenotype /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from electronic annotation /// 0045295 // gamma-catenin binding // inferred from physical interaction /// 0070016 // armadillo repeat domain binding // inferred from physical interaction /// 0070742 // C2H2 zinc finger domain binding // inferred from physical interaction","chr4:108969365-109088923 (-) // 93.75 // q25"]
["11728205_s_at",0.0021505356,-0.0021505356,0.039984703,-0.035746574,0.05440998,-0.049084663,0.81925964,0.54091805,1.0164002,0.02346859,1.0164002,"up","FAM120A",23196.0,"","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation","chr9:96213977-96328683 (+) // 95.88 // q22.31"]
["11726391_x_at",-0.0058836937,0.1834588,0.13072014,-0.025669575,-0.048556328,0.0058836937,0.45667765,0.09875036,1.0909203,0.12554574,1.0909203,"up","MZF1",7593.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0016032 // viral reproduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:59073292-59084942 (-) // 95.54 // q13.43"]
["11740964_a_at",-0.0047073364,-0.022612095,0.05571747,0.0047073364,0.01204443,-0.11025858,0.75813997,0.42831138,1.0285664,0.040634874,1.0285664,"up","MTHFD2L",441024.0,"0000105 // histidine biosynthetic process // inferred from electronic annotation /// 0006164 // purine nucleotide biosynthetic process // inferred from electronic annotation /// 0006730 // one-carbon metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008652 // cellular amino acid biosynthetic process // inferred from electronic annotation /// 0009086 // methionine biosynthetic process // inferred from electronic annotation /// 0009396 // folic acid-containing compound biosynthetic process // inferred from electronic annotation /// 0035999 // tetrahydrofolate interconversion // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004477 // methenyltetrahydrofolate cyclohydrolase activity // inferred from electronic annotation /// 0004487 // methylenetetrahydrofolate dehydrogenase (NAD+) activity // inferred from electronic annotation /// 0004488 // methylenetetrahydrofolate dehydrogenase (NADP+) activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr4:75023828-75168812 (+) // 96.21 // q13.3"]
["11751418_a_at",-0.3545065,-0.01678276,-0.18365955,0.2206521,0.01678276,0.12499142,0.37262902,0.05495703,-1.2360967,-0.30579165,1.2360967,"down","PSD4",23550.0,"0016192 // vesicle-mediated transport // not recorded /// 0030182 // neuron differentiation // not recorded /// 0032012 // regulation of ARF protein signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005802 // trans-Golgi network // not recorded /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // not recorded","0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005086 // ARF guanyl-nucleotide exchange factor activity // not recorded /// 0005086 // ARF guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation","chr2:113954918-113959298 (+) // 99.92 // q13"]
["11724513_a_at",0.037055492,-0.043637276,-0.19701433,0.30127478,0.027332306,-0.027332306,0.62502545,0.2419919,-1.123726,-0.16829032,1.123726,"down","SULT4A1",25830.0,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0006790 // sulfur compound metabolic process // inferred from electronic annotation /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0008202 // steroid metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0050427 // 3'-phosphoadenosine 5'-phosphosulfate metabolic process // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // non-traceable author statement /// 0005829 // cytosol // traceable author statement","0008146 // sulfotransferase activity // non-traceable author statement /// 0008146 // sulfotransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr22:44220388-44258398 (-) // 91.76 // q13.31"]
["11745910_a_at",-0.0033373833,0.0,0.046371937,0.0,0.21963024,-0.06475735,0.88803524,0.6921286,-1.0261769,-0.037279494,1.0261769,"down","CDK18",5129.0,"0006468 // protein phosphorylation // non-traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation","","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // non-traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004693 // cyclin-dependent protein kinase activity // inferred from electronic annotation /// 0004871 // signal transducer activity // non-traceable author statement /// 0005524 // ATP binding // non-traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr1:205473692-205496613 (+) // 73.07 // q32.1"]
["11737581_a_at",0.07773018,-0.013328552,-0.16527271,-0.119529724,0.013328552,0.07705736,0.93581575,0.8068172,-1.0167106,-0.023909139,1.0167106,"down","CAPN9",10753.0,"0006508 // proteolysis // inferred from electronic annotation /// 0007586 // digestion // traceable author statement","0005622 // intracellular // inferred from electronic annotation","0004198 // calcium-dependent cysteine-type endopeptidase activity // inferred from electronic annotation /// 0004198 // calcium-dependent cysteine-type endopeptidase activity // traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005509 // calcium ion binding // traceable author statement /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr1:230883160-230937855 (+) // 99.58 // q42.2"]
["11733430_a_at",0.03946972,0.021299124,0.10220599,-0.32137108,-0.021299362,-0.08307052,0.47028908,0.106986694,1.1457074,0.1962386,1.1457074,"up","C10orf90",118611.0,"0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007095 // mitotic cell cycle G2/M transition DNA damage checkpoint // inferred from electronic annotation /// 0009411 // response to UV // inferred from electronic annotation /// 0010212 // response to ionizing radiation // inferred from electronic annotation /// 0030308 // negative regulation of cell growth // inferred from electronic annotation /// 0050821 // protein stabilization // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from direct assay","0042826 // histone deacetylase binding // inferred from electronic annotation","chr10:128113570-128210064 (-) // 99.43 // q26.2"]
["11723078_s_at",0.024590492,-0.0013751984,-0.08227062,0.05408287,-0.16747665,0.0013751984,0.94182914,0.8235511,1.0123123,0.017654423,1.0123123,"up","CXorf26",51260.0,"","","","chrX:75392741-75398424 (+) // 87.99 // q13.3"]
["11750388_a_at",-0.12504697,-0.06970215,0.03161478,0.046114445,-0.031614542,0.045032263,0.61662817,0.23100744,-1.0527933,-0.07422216,1.0527933,"down","HSF5",124535.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr17:56498135-56565701 (-) // 98.21 // q22"]
["11718857_a_at",0.06987667,-0.014899254,-0.09402704,0.0,0.0,0.014898777,0.9023031,0.72469217,-1.0125427,-0.017982785,1.0125427,"down","NUDCD3",23386.0,"","","","chr7:44421964-44530479 (-) // 96.61 // p13"]
["11746665_a_at",0.03483677,0.0073456764,-0.03395033,0.11740208,-0.0073456764,-0.00971365,0.8219248,0.5451445,-1.0215101,-0.030703502,1.0215101,"down","GCFC1",94104.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation","chr21:34131666-34144103 (-) // 99.37 // q22.11"]
["AFFX-r2-TagF_at",-0.028988361,0.089297295,0.023226261,-0.0971427,-0.023226261,0.06995201,0.7940075,0.4928902,1.0314335,0.044650756,1.0314335,"up",-0.0971427,-0.023226261,0.06995201,-0.028988361,0.089297295,0.023226261]
["11747372_a_at",0.054493427,0.10134363,0.10954285,-0.054493427,-0.07924938,-0.058102608,0.098513134,0.0012601318,1.1114234,0.15240848,1.1114234,"up","SYBU",55638.0,"","0000139 // Golgi membrane // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr8:110586881-110620304 (-) // 98.94 // q23.2"]
["11752727_a_at",-8.5020065E-4,8.5020065E-4,-0.06967807,0.06478405,-0.021790266,0.12598276,0.5630412,0.17810608,-1.0566895,-0.07955152,1.0566895,"down","INPP5E",56623.0,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0010976 // positive regulation of neuron projection development // inferred from electronic annotation /// 0046488 // phosphatidylinositol metabolic process // inferred from electronic annotation /// 0046854 // phosphatidylinositol phosphorylation // inferred from electronic annotation /// 0046855 // inositol phosphate dephosphorylation // inferred from electronic annotation /// 0046856 // phosphatidylinositol dephosphorylation // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation /// 0035085 // cilium axoneme // inferred from direct assay /// 0035085 // cilium axoneme // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0004439 // phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity // inferred from electronic annotation /// 0004445 // inositol-polyphosphate 5-phosphatase activity // traceable author statement /// 0004445 // inositol-polyphosphate 5-phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr9:139332733-139334275 (-) // 95.17 // q34.3"]
["11727946_at",0.019663334,-0.011013985,0.091742516,-0.12651491,0.011013985,-0.27903938,0.5155431,0.13784346,1.1211485,0.16497734,1.1211485,"up","SHPK",23729.0,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016773 // phosphotransferase activity, alcohol group as acceptor // inferred from electronic annotation /// 0050277 // sedoheptulokinase activity // inferred from electronic annotation","chr17:3511555-3539616 (-) // 80.57 // p13.2"]
["11747659_a_at",0.02115798,0.19564056,-0.07822132,-0.02115798,0.10125995,-0.08894253,0.8653582,0.6407277,1.0346475,0.04913928,1.0346475,"up","ARMCX4",1.00131755E8,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chrX:100740396-100744305 (+) // 79.04 // q22.1"]
["11742601_at",-0.02930832,-0.07004833,-0.01621604,0.016215801,0.07584429,0.024730206,0.31584507,0.03493191,-1.0551546,-0.07745434,1.0551546,"down","OR6C75",390323.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr12:55758894-55759833 (+) // 100.0 // q13.2"]
["11749597_x_at",0.046525955,0.005206108,0.09784317,-0.023294449,-0.005206108,-0.03389263,0.39774945,0.06556979,1.0501941,0.07065605,1.0501941,"up","UBAC2",337867.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr13:99853060-100037820 (+) // 94.69 // q32.3"]
["11744519_a_at",-0.03280449,0.02186203,-0.08994579,0.020706177,-0.002916336,0.002916336,0.66081536,0.28733248,-1.0284927,-0.04053154,1.0284927,"down","POLE2",5427.0,"0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000084 // S phase of mitotic cell cycle // traceable author statement /// 0000216 // M/G1 transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0000722 // telomere maintenance via recombination // traceable author statement /// 0000723 // telomere maintenance // traceable author statement /// 0006260 // DNA replication // traceable author statement /// 0006260 // DNA replication // inferred from electronic annotation /// 0006261 // DNA-dependent DNA replication // inferred from electronic annotation /// 0006270 // DNA-dependent DNA replication initiation // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006283 // transcription-coupled nucleotide-excision repair // traceable author statement /// 0006289 // nucleotide-excision repair // traceable author statement /// 0006297 // nucleotide-excision repair, DNA gap filling // traceable author statement /// 0032201 // telomere maintenance via semi-conservative replication // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003887 // DNA-directed DNA polymerase activity // inferred from electronic annotation /// 0003887 // DNA-directed DNA polymerase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016779 // nucleotidyltransferase activity // inferred from electronic annotation","chr14:50110272-50155140 (-) // 98.37 // q21.3"]
["11746776_a_at",0.19410563,0.11324501,-0.03491831,0.03491831,-0.08935976,-0.07533598,0.54348177,0.15962613,1.0973852,0.13406998,1.0973852,"up","RPRD1A",55197.0,"0070940 // dephosphorylation of RNA polymerase II C-terminal domain // inferred from mutant phenotype","0016591 // DNA-directed RNA polymerase II, holoenzyme // inferred from direct assay","","chr18:33605561-33647520 (-) // 97.8 // q12.2"]
["11738957_a_at",0.13110876,0.0216918,-5.431175E-4,-0.05877924,5.431175E-4,-0.18446589,0.4984329,0.12512538,1.0955484,0.1316532,1.0955484,"up","PSPN",5623.0,"0001658 // branching involved in ureteric bud morphogenesis // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007417 // central nervous system development // traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation","0005102 // receptor binding // traceable author statement /// 0008083 // growth factor activity // inferred from electronic annotation","chr19:6375304-6375860 (-) // 100.0 // p13.3"]
["11750801_a_at",-0.03859043,0.029921532,0.051631927,-0.041934967,0.04910469,-0.029921532,0.8512936,0.6081172,1.0152992,0.021904942,1.0152992,"up","DLAT",1737.0,"0006085 // acetyl-CoA biosynthetic process // non-traceable author statement /// 0006086 // acetyl-CoA biosynthetic process from pyruvate // inferred from electronic annotation /// 0006090 // pyruvate metabolic process // traceable author statement /// 0006090 // pyruvate metabolic process // inferred from electronic annotation /// 0006096 // glycolysis // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0010510 // regulation of acetyl-CoA biosynthetic process from pyruvate // traceable author statement /// 0030431 // sleep // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement","0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement /// 0005759 // mitochondrial matrix // inferred from electronic annotation /// 0005967 // mitochondrial pyruvate dehydrogenase complex // non-traceable author statement /// 0045254 // pyruvate dehydrogenase complex // inferred from electronic annotation","0004742 // dihydrolipoyllysine-residue acetyltransferase activity // non-traceable author statement /// 0004742 // dihydrolipoyllysine-residue acetyltransferase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation","chr11:111896131-111933495 (+) // 99.95 // q23.1"]
["11746724_a_at",0.07596588,-0.0525012,-0.04599762,-0.01730156,0.017302036,0.093604565,0.8009503,0.50631577,-1.0271969,-0.038712732,1.0271969,"down","BTN2A3P",54718.0,"","0016021 // integral to membrane // inferred from electronic annotation","","chr6:26421618-26431323 (+) // 87.3 // p22.2"]
["11760418_a_at",0.08390713,0.1454091,-0.14966154,-0.017882347,-0.035407543,0.017882347,0.8894896,0.695804,1.0269415,0.038354054,1.0269415,"up","RCAN1",1827.0,"0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007417 // central nervous system development // traceable author statement /// 0007519 // skeletal muscle tissue development // inferred from electronic annotation /// 0008015 // blood circulation // traceable author statement /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0019722 // calcium-mediated signaling // inferred from electronic annotation /// 0043627 // response to estrogen stimulus // inferred from electronic annotation /// 0043666 // regulation of phosphoprotein phosphatase activity // inferred from electronic annotation /// 0048741 // skeletal muscle fiber development // inferred from electronic annotation /// 0051151 // negative regulation of smooth muscle cell differentiation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation","0003677 // DNA binding // traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr21:35891715-35899122 (-) // 85.86 // q22.12"]
["11732244_at",-0.20869398,-0.029370308,-0.23188305,0.042497158,0.12784147,0.029370308,0.31532022,0.03478612,-1.1673352,-0.22321883,1.1673352,"down","APOL6",80830.0,"0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // non-traceable author statement /// 0006869 // lipid transport // inferred from electronic annotation /// 0042157 // lipoprotein metabolic process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation","0005319 // lipid transporter activity // non-traceable author statement /// 0008289 // lipid binding // inferred from electronic annotation","chr22:36044416-36064407 (+) // 18.3 // q12.3"]
["11748080_a_at",0.025624752,-0.025624752,0.1162858,0.044627666,-0.08017492,-0.043720722,0.6753796,0.30628967,1.0462188,0.06518453,1.0462188,"up","DLST",1743.0,"0006091 // generation of precursor metabolites and energy // traceable author statement /// 0006099 // tricarboxylic acid cycle // traceable author statement /// 0006099 // tricarboxylic acid cycle // inferred from electronic annotation /// 0006103 // 2-oxoglutarate metabolic process // inferred from electronic annotation /// 0006554 // lysine catabolic process // traceable author statement /// 0006734 // NADH metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0033512 // L-lysine catabolic process to acetyl-CoA via saccharopine // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement /// 0005792 // microsome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0045252 // oxoglutarate dehydrogenase complex // inferred from electronic annotation","0004149 // dihydrolipoyllysine-residue succinyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0031072 // heat shock protein binding // inferred from electronic annotation /// 0051087 // chaperone binding // inferred from electronic annotation","chr14:75348593-75369155 (+) // 94.43 // q24.3 /// chr1:76208984-76210467 (-) // 92.42 // p31.1"]
["11719717_x_at",0.051056862,0.016518593,0.030695915,-0.05460167,-0.016518593,-0.052809715,0.19471863,0.0097062625,1.0526801,0.07406713,1.0526801,"up","PPP1R14B",26472.0,"0042325 // regulation of phosphorylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0004864 // protein phosphatase inhibitor activity // inferred from electronic annotation /// 0008599 // protein phosphatase type 1 regulator activity // inferred from electronic annotation /// 0019212 // phosphatase inhibitor activity // inferred from electronic annotation","chr11:64011950-64014413 (-) // 86.0 // q13.1"]
["11760183_at",-0.16000462,0.043520927,-0.06694412,-0.018906593,0.018906593,0.082669735,0.6308667,0.24935482,-1.0634109,-0.08869913,1.0634109,"down","PLK1S1",55857.0,"0007051 // spindle organization // inferred from mutant phenotype","0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from physical interaction","chr20:21106680-21227260 (+) // 80.95 // p11.23"]
["11749648_a_at",-0.0036582947,-0.0035181046,0.059354782,0.009059906,0.0035181046,-0.02780056,0.74007773,0.40067318,1.0156949,0.022467041,1.0156949,"up","HIF1A",3091.0,"0001525 // angiogenesis // inferred from electronic annotation /// 0001568 // blood vessel development // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from direct assay /// 0001666 // response to hypoxia // inferred from mutant phenotype /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001755 // neural crest cell migration // inferred from electronic annotation /// 0001837 // epithelial to mesenchymal transition // inferred from sequence or structural similarity /// 0001837 // epithelial to mesenchymal transition // inferred from electronic annotation /// 0001892 // embryonic placenta development // inferred from electronic annotation /// 0001922 // B-1 B cell homeostasis // inferred from electronic annotation /// 0001938 // positive regulation of endothelial cell proliferation // inferred by curator /// 0001944 // vasculature development // inferred from electronic annotation /// 0001947 // heart looping // inferred from electronic annotation /// 0002052 // positive regulation of neuroblast proliferation // inferred from electronic annotation /// 0002248 // connective tissue replacement involved in inflammatory response wound healing // inferred from sequence or structural similarity /// 0002248 // connective tissue replacement involved in inflammatory response wound healing // inferred from electronic annotation /// 0003151 // outflow tract morphogenesis // inferred from electronic annotation /// 0003208 // cardiac ventricle morphogenesis // inferred from electronic annotation /// 0006089 // lactate metabolic process // inferred from electronic annotation /// 0006110 // regulation of glycolysis // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // inferred from electronic annotation /// 0007165 // signal transduction // inferred from mutant phenotype /// 0007165 // signal transduction // inferred from electronic annotation /// 0007219 // Notch signaling pathway // traceable author statement /// 0007595 // lactation // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008542 // visual learning // inferred from electronic annotation /// 0009749 // response to glucose stimulus // inferred from electronic annotation /// 0010468 // regulation of gene expression // inferred from direct assay /// 0010573 // vascular endothelial growth factor production // inferred from direct assay /// 0010575 // positive regulation vascular endothelial growth factor production // inferred from direct assay /// 0010634 // positive regulation of epithelial cell migration // inferred from sequence or structural similarity /// 0010634 // positive regulation of epithelial cell migration // inferred from electronic annotation /// 0010870 // positive regulation of receptor biosynthetic process // inferred from mutant phenotype /// 0014850 // response to muscle activity // inferred from electronic annotation /// 0019896 // axon transport of mitochondrion // inferred from mutant phenotype /// 0021502 // neural fold elevation formation // inferred from electronic annotation /// 0021987 // cerebral cortex development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030502 // negative regulation of bone mineralization // inferred from electronic annotation /// 0030949 // positive regulation of vascular endothelial growth factor receptor signaling pathway // inferred by curator /// 0030949 // positive regulation of vascular endothelial growth factor receptor signaling pathway // inferred from electronic annotation /// 0032007 // negative regulation of TOR signaling cascade // inferred from electronic annotation /// 0032364 // oxygen homeostasis // inferred from direct assay /// 0032364 // oxygen homeostasis // inferred from electronic annotation /// 0032722 // positive regulation of chemokine production // traceable author statement /// 0032869 // cellular response to insulin stimulus // inferred from electronic annotation /// 0032909 // regulation of transforming growth factor beta2 production // inferred from mutant phenotype /// 0032963 // collagen metabolic process // inferred from sequence or structural similarity /// 0032963 // collagen metabolic process // inferred from electronic annotation /// 0035162 // embryonic hemopoiesis // inferred from electronic annotation /// 0035774 // positive regulation of insulin secretion involved in cellular response to glucose stimulus // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042541 // hemoglobin biosynthetic process // inferred from electronic annotation /// 0042593 // glucose homeostasis // inferred from electronic annotation /// 0042789 // mRNA transcription from RNA polymerase II promoter // inferred by curator /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0043619 // regulation of transcription from RNA polymerase II promoter in response to oxidative stress // inferred from direct assay /// 0043619 // regulation of transcription from RNA polymerase II promoter in response to oxidative stress // inferred from electronic annotation /// 0045648 // positive regulation of erythrocyte differentiation // inferred by curator /// 0045648 // positive regulation of erythrocyte differentiation // inferred from electronic annotation /// 0045766 // positive regulation of angiogenesis // inferred by curator /// 0045821 // positive regulation of glycolysis // inferred by curator /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045926 // negative regulation of growth // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from genetic interaction /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046716 // muscle cell homeostasis // inferred from electronic annotation /// 0046886 // positive regulation of hormone biosynthetic process // inferred from direct assay /// 0048514 // blood vessel morphogenesis // inferred from electronic annotation /// 0048546 // digestive tract morphogenesis // inferred from electronic annotation /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from electronic annotation /// 0050790 // regulation of catalytic activity // inferred from electronic annotation /// 0051000 // positive regulation of nitric-oxide synthase activity // traceable author statement /// 0051216 // cartilage development // inferred from electronic annotation /// 0051541 // elastin metabolic process // inferred from sequence or structural similarity /// 0051541 // elastin metabolic process // inferred from electronic annotation /// 0060574 // intestinal epithelial cell maturation // inferred from electronic annotation /// 0061030 // epithelial cell differentiation involved in mammary gland alveolus development // inferred from electronic annotation /// 0061298 // retina vasculature development in camera-type eye // inferred from electronic annotation /// 0070101 // positive regulation of chemokine-mediated signaling pathway // inferred by curator /// 0071347 // cellular response to interleukin-1 // inferred from expression pattern /// 0071456 // cellular response to hypoxia // inferred from direct assay /// 0071456 // cellular response to hypoxia // inferred from expression pattern /// 0071542 // dopaminergic neuron differentiation // inferred from electronic annotation /// 2001054 // negative regulation of mesenchymal cell apoptotic process // inferred from electronic annotation /// 2001141 // regulation of RNA biosynthetic process // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from physical interaction /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0009434 // microtubule-based flagellum // inferred from electronic annotation","0000988 // protein binding transcription factor activity // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0035035 // histone acetyltransferase binding // inferred from physical interaction /// 0042826 // histone deacetylase binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from physical interaction /// 0046982 // protein heterodimerization activity // traceable author statement /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0051879 // Hsp90 protein binding // inferred from direct assay","chr14:62164339-62214489 (+) // 98.21 // q23.2"]
["11722049_a_at",-0.03506422,-0.0028839111,0.0028834343,0.059638977,-0.07181597,0.25622416,0.73124784,0.3875592,-1.0666133,-0.09303724,1.0666133,"down","DUSP6",1848.0,"0000188 // inactivation of MAPK activity // inferred from direct assay /// 0001933 // negative regulation of protein phosphorylation // inferred from electronic annotation /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0008063 // Toll signaling pathway // traceable author statement /// 0009953 // dorsal/ventral pattern formation // not recorded /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from direct assay /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0040036 // regulation of fibroblast growth factor receptor signaling pathway // not recorded /// 0042493 // response to drug // inferred from electronic annotation /// 0042663 // regulation of endodermal cell fate specification // not recorded /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0045087 // innate immune response // traceable author statement /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0051409 // response to nitrosative stress // inferred from expression pattern /// 0060420 // regulation of heart growth // not recorded /// 0060420 // regulation of heart growth // inferred from electronic annotation /// 0070373 // negative regulation of ERK1 and ERK2 cascade // inferred from mutant phenotype /// 0070373 // negative regulation of ERK1 and ERK2 cascade // inferred from electronic annotation /// 0070848 // response to growth factor stimulus // inferred from electronic annotation","0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // not recorded","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0008138 // protein tyrosine/serine/threonine phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0017017 // MAP kinase tyrosine/serine/threonine phosphatase activity // inferred from direct assay /// 0017017 // MAP kinase tyrosine/serine/threonine phosphatase activity // inferred from electronic annotation","chr12:89741015-89746296 (-) // 99.43 // q21.33"]
["11716419_at",0.024036884,-0.024036884,0.052170515,-0.06887102,0.24541712,-0.15731907,0.97970045,0.9338018,1.0076406,0.010981157,1.0076406,"up","SPTBN1",6711.0,"0000281 // cytokinesis after mitosis // inferred from mutant phenotype /// 0007009 // plasma membrane organization // inferred from mutant phenotype /// 0007182 // common-partner SMAD protein phosphorylation // inferred from electronic annotation /// 0007184 // SMAD protein import into nucleus // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0043001 // Golgi to plasma membrane protein transport // inferred from mutant phenotype /// 0051693 // actin filament capping // inferred from electronic annotation /// 0071709 // membrane assembly // inferred from mutant phenotype /// 0072661 // protein targeting to plasma membrane // inferred from mutant phenotype","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0008091 // spectrin // inferred from electronic annotation /// 0008091 // spectrin // traceable author statement /// 0014731 // spectrin-associated cytoskeleton // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030863 // cortical cytoskeleton // inferred from electronic annotation /// 0031430 // M band // inferred from electronic annotation /// 0032437 // cuticular plate // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0003779 // actin binding // traceable author statement /// 0005200 // structural constituent of cytoskeleton // inferred from mutant phenotype /// 0005200 // structural constituent of cytoskeleton // inferred from electronic annotation /// 0005200 // structural constituent of cytoskeleton // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0030506 // ankyrin binding // inferred from physical interaction /// 0030506 // ankyrin binding // non-traceable author statement","chr2:54683453-54898582 (+) // 94.95 // p16.2"]
["11736605_a_at",0.03996277,0.00483799,0.104678154,-0.006922722,-0.00483799,-0.08030701,0.46440896,0.10372223,1.0573958,0.08051552,1.0573958,"up","XPO7",23039.0,"0006611 // protein export from nucleus // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0051028 // mRNA transport // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005643 // nuclear pore // inferred from direct assay /// 0005643 // nuclear pore // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0005049 // nuclear export signal receptor activity // inferred from direct assay /// 0008565 // protein transporter activity // inferred from electronic annotation","chr8:21823748-21864091 (+) // 97.03 // p21.3"]
["11753463_a_at",0.030416012,-0.01846385,0.018464088,0.02251196,-0.024397135,-0.04119706,0.71786076,0.3664881,1.0171268,0.024499541,1.0171268,"up","SLC2A5",6518.0,"0005975 // carbohydrate metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0008643 // carbohydrate transport // inferred from electronic annotation /// 0008645 // hexose transport // traceable author statement /// 0015755 // fructose transport // traceable author statement /// 0015755 // fructose transport // inferred from electronic annotation /// 0015758 // glucose transport // traceable author statement /// 0015758 // glucose transport // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation /// 0005353 // fructose transmembrane transporter activity // inferred from electronic annotation /// 0005353 // fructose transmembrane transporter activity // traceable author statement /// 0005355 // glucose transmembrane transporter activity // inferred from electronic annotation /// 0005355 // glucose transmembrane transporter activity // traceable author statement /// 0022857 // transmembrane transporter activity // inferred from electronic annotation /// 0022891 // substrate-specific transmembrane transporter activity // inferred from electronic annotation","chr1:9101499-9129655 (-) // 96.82 // p36.23"]
["11756170_a_at",-0.054995537,-0.04241562,0.008562088,-0.008562088,0.042126656,0.10256004,0.48594528,0.11642891,-1.0533546,-0.07499121,1.0533546,"down","CXorf38",159013.0,"","","","chrX:40489188-40506783 (-) // 77.56 // p11.4"]
["11730604_at",-0.12455511,0.24445534,-0.0027136803,0.0027136803,-0.20686579,0.08117676,0.8447531,0.5941746,1.0570576,0.080054015,1.0570576,"up","EPB41L4B",54566.0,"0031032 // actomyosin structure organization // inferred from direct assay","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005856 // cytoskeleton // traceable author statement /// 0019898 // extrinsic to membrane // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from direct assay","0005200 // structural constituent of cytoskeleton // traceable author statement /// 0008092 // cytoskeletal protein binding // inferred from electronic annotation","chr9:111934253-112083021 (-) // 79.56 // q31.3"]
["11750408_a_at",0.001115799,-0.001115799,0.09381676,-0.014533997,0.0072288513,-0.08318901,0.59983337,0.21270739,1.0435046,0.061436955,1.0435046,"up","CD97",976.0,"0006928 // cellular component movement // traceable author statement /// 0006954 // inflammatory response // traceable author statement /// 0006955 // immune response // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007218 // neuropeptide signaling pathway // inferred from electronic annotation /// 0007267 // cell-cell signaling // traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // traceable author statement /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation","chr19:14492255-14519172 (+) // 99.78 // p13.12"]
["11727078_s_at",-0.008633137,0.008633614,-0.13605022,-0.026985645,0.1685214,0.06013584,0.58238375,0.196225,-1.0811553,-0.11257377,1.0811553,"down","NUFIP1",26747.0,"0000492 // box C/D snoRNP assembly // inferred from mutant phenotype /// 0006396 // RNA processing // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005726 // perichromatin fibrils // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0008023 // transcription elongation factor complex // inferred from direct assay /// 0016363 // nuclear matrix // inferred from direct assay /// 0022626 // cytosolic ribosome // inferred from direct assay /// 0048786 // presynaptic active zone // inferred from direct assay /// 0070761 // pre-snoRNP complex // inferred from direct assay","0003677 // DNA binding // non-traceable author statement /// 0003723 // RNA binding // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0030515 // snoRNA binding // inferred from direct assay /// 0030674 // protein binding, bridging // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr13:45513197-45563618 (-) // 92.27 // q14.12"]
["11738063_a_at",0.028362274,0.036922216,-0.15921879,-0.06444907,0.047059298,-0.028362036,0.94534135,0.8342759,-1.0111947,-0.016060816,1.0111947,"down","S100A7A",338324.0,"","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:153390419-153395697 (+) // 79.13 // q21.3"]
["11725461_s_at",-0.014620304,0.020539284,0.058207512,0.014620304,-0.09715223,-0.045037746,0.55727816,0.17260449,1.0452868,0.0638988,1.0452868,"up","MAU2",23383.0,"0007049 // cell cycle // inferred from electronic annotation /// 0007059 // chromosome segregation // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0034088 // maintenance of mitotic sister chromatid cohesion // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation","0000785 // chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0032116 // SMC loading complex // inferred from direct assay /// 0032116 // SMC loading complex // inferred from mutant phenotype","0005515 // protein binding // inferred from physical interaction /// 0047485 // protein N-terminus binding // inferred from physical interaction","chr19:19431622-19469562 (+) // 94.36 // p13.11"]
["11734768_s_at",0.009173393,-0.006672859,0.047533035,0.006672859,-0.008493423,-0.02495861,0.6219806,0.23863052,1.017906,0.025604269,1.017906,"up","THOC2",57187.0,"0006397 // mRNA processing // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0046784 // intronless viral mRNA export from host nucleus // inferred from direct assay /// 0051028 // mRNA transport // inferred from electronic annotation","0000346 // transcription export complex // inferred from direct assay /// 0000347 // THO complex // inferred from direct assay /// 0000445 // THO complex part of transcription export complex // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chrX:122734412-122866903 (-) // 97.35 // q25"]
["11760574_x_at",0.02905798,0.090821266,0.02504301,-0.05472946,-0.19694519,-0.025043488,0.4064396,0.06978468,1.1023228,0.14054678,1.1023228,"up","FOSL1",8061.0,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006935 // chemotaxis // traceable author statement /// 0006968 // cellular defense response // traceable author statement /// 0007565 // female pregnancy // inferred from electronic annotation /// 0007612 // learning // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0009615 // response to virus // traceable author statement /// 0009629 // response to gravity // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0031668 // cellular response to extracellular stimulus // inferred from electronic annotation /// 0032570 // response to progesterone stimulus // inferred from electronic annotation /// 0034097 // response to cytokine stimulus // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042542 // response to hydrogen peroxide // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0045787 // positive regulation of cell cycle // inferred from electronic annotation /// 0046022 // positive regulation of transcription from RNA polymerase II promoter during mitosis // inferred from electronic annotation /// 0051412 // response to corticosterone stimulus // inferred from electronic annotation /// 0051591 // response to cAMP // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005792 // microsome // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0042734 // presynaptic membrane // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation","chr11:65659089-65667859 (-) // 89.2 // q13.1"]
["11716069_at",0.039788246,0.037160873,0.07293892,-0.06842995,-0.058153152,-0.037160873,0.11455932,0.0020859314,1.0751545,0.10454404,1.0751545,"up","DESI2",51029.0,"0006508 // proteolysis // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0008233 // peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr1:244816055-244872335 (+) // 97.71 // q44"]
["11752684_a_at",0.023478508,0.011739254,-0.011739254,0.05411935,-0.03971243,-0.023478508,0.90988755,0.74200183,1.007549,0.010850071,1.007549,"up","C12orf40",283461.0,"","","","chr12:40019971-40085987 (+) // 98.98 // q12"]
["11718352_a_at",-0.120162964,-0.03619194,-0.014167786,0.03987789,0.014167786,0.044866562,0.37540087,0.0559318,-1.0642313,-0.089811705,1.0642313,"down","VPS33B",26276.0,"0006810 // transport // inferred from electronic annotation /// 0006904 // vesicle docking involved in exocytosis // inferred from electronic annotation /// 0006944 // cellular membrane fusion // inferred from mutant phenotype /// 0015031 // protein transport // inferred from mutant phenotype /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from direct assay /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0032400 // melanosome localization // inferred from direct assay /// 0032418 // lysosome localization // inferred from direct assay /// 0070889 // platelet alpha granule organization // inferred from mutant phenotype","0005737 // cytoplasm // inferred from direct assay /// 0005764 // lysosome // inferred from direct assay /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030897 // HOPS complex // inferred from direct assay /// 0031091 // platelet alpha granule // inferred from direct assay /// 0031902 // late endosome membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr15:91541646-91565851 (-) // 95.32 // q26.1"]
["11731308_a_at",-0.10858011,0.14146185,0.13301039,-0.03694272,0.03694272,-0.055775166,0.76538664,0.44220272,1.0525502,0.07388904,1.0525502,"up","KCNIP4",80333.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0071805 // potassium ion transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005267 // potassium channel activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation","chr4:20730233-21699397 (-) // 94.26 // p15.31"]
["11754937_a_at",-0.004088402,0.013442993,0.024852753,-0.057543755,0.004088402,-0.060477257,0.44950303,0.09493764,1.0348201,0.049379952,1.0348201,"up","GMNN",51053.0,"0000216 // M/G1 transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006275 // regulation of DNA replication // inferred from electronic annotation /// 0006461 // protein complex assembly // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0008156 // negative regulation of DNA replication // inferred from direct assay /// 0008156 // negative regulation of DNA replication // inferred from electronic annotation /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0045786 // negative regulation of cell cycle // inferred from direct assay /// 0045786 // negative regulation of cell cycle // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0003714 // transcription corepressor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0042826 // histone deacetylase binding // inferred from physical interaction /// 0070491 // repressing transcription factor binding // inferred from electronic annotation","chr6:24775163-24786323 (+) // 93.53 // p22.3"]
["11715217_s_at",0.18930626,0.033346176,-0.071602106,-0.016462088,-0.03334713,0.01646185,0.7829288,0.47047058,1.0435256,0.06146596,1.0435256,"up","MOGAT2",80168.0,"0006071 // glycerol metabolic process // inferred from electronic annotation /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006651 // diacylglycerol biosynthetic process // inferred from electronic annotation /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0019432 // triglyceride biosynthetic process // inferred from electronic annotation /// 0050892 // intestinal absorption // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003846 // 2-acylglycerol O-acyltransferase activity // inferred from electronic annotation /// 0016407 // acetyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0016747 // transferase activity, transferring acyl groups other than amino-acyl groups // inferred from electronic annotation","chr11:75428933-75442331 (+) // 100.0 // q13.5"]
["11740414_a_at",-0.112149715,-0.06587696,0.07959366,0.11680794,0.011152744,-0.011152744,0.71570444,0.36308318,-1.0509886,-0.07174696,1.0509886,"down","TLE1",7088.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007219 // Notch signaling pathway // traceable author statement /// 0007275 // multicellular organismal development // traceable author statement /// 0009887 // organ morphogenesis // traceable author statement /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0030178 // negative regulation of Wnt receptor signaling pathway // non-traceable author statement /// 0043124 // negative regulation of I-kappaB kinase/NF-kappaB cascade // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation","0001106 // RNA polymerase II transcription corepressor activity // inferred from direct assay /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003714 // transcription corepressor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from direct assay /// 0008134 // transcription factor binding // inferred from physical interaction","chr9:84198597-84303596 (-) // 98.4 // q21.32"]
["11748161_at",0.1863246,-0.04634428,-0.1331687,0.18091393,-0.016462326,0.016462326,0.8631251,0.63532215,-1.0410463,-0.058034178,1.0410463,"down","XRCC3",7517.0,"0006259 // DNA metabolic process // inferred from electronic annotation /// 0006281 // DNA repair // inferred from genetic interaction /// 0006281 // DNA repair // inferred from electronic annotation /// 0006281 // DNA repair // traceable author statement /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006310 // DNA recombination // traceable author statement /// 0006974 // response to DNA damage stimulus // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008094 // DNA-dependent ATPase activity // inferred from electronic annotation","chr14:104177606-104179257 (+) // 94.76 // q32.33"]
["11750614_x_at",0.015701294,-0.0012273788,0.11992073,-0.13205576,-0.23240471,0.0012273788,0.45682687,0.099194765,1.121847,0.16587597,1.121847,"up","GRIN1",2902.0,"0001661 // conditioned taste aversion // inferred from electronic annotation /// 0001964 // startle response // inferred from electronic annotation /// 0001967 // suckling behavior // inferred from electronic annotation /// 0001975 // response to amphetamine // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // inferred from direct assay /// 0006812 // cation transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0006874 // cellular calcium ion homeostasis // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007585 // respiratory gaseous exchange // inferred from electronic annotation /// 0007611 // learning or memory // inferred from electronic annotation /// 0007612 // learning // inferred from electronic annotation /// 0007613 // memory // inferred from electronic annotation /// 0007616 // long-term memory // inferred from electronic annotation /// 0008306 // associative learning // inferred from electronic annotation /// 0008344 // adult locomotory behavior // inferred from electronic annotation /// 0008355 // olfactory learning // inferred from electronic annotation /// 0008542 // visual learning // inferred from electronic annotation /// 0008542 // visual learning // inferred from sequence or structural similarity /// 0010646 // regulation of cell communication // inferred from electronic annotation /// 0019233 // sensory perception of pain // inferred from electronic annotation /// 0021586 // pons maturation // inferred from electronic annotation /// 0021987 // cerebral cortex development // inferred from electronic annotation /// 0035176 // social behavior // inferred from electronic annotation /// 0035235 // ionotropic glutamate receptor signaling pathway // inferred from sequence or structural similarity /// 0035235 // ionotropic glutamate receptor signaling pathway // inferred from electronic annotation /// 0035249 // synaptic transmission, glutamatergic // inferred from electronic annotation /// 0042391 // regulation of membrane potential // inferred from direct assay /// 0042391 // regulation of membrane potential // inferred from electronic annotation /// 0043278 // response to morphine // inferred from electronic annotation /// 0043523 // regulation of neuron apoptotic process // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0043576 // regulation of respiratory gaseous exchange // inferred from electronic annotation /// 0045471 // response to ethanol // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0048167 // regulation of synaptic plasticity // inferred from electronic annotation /// 0048168 // regulation of neuronal synaptic plasticity // inferred from electronic annotation /// 0048169 // regulation of long-term neuronal synaptic plasticity // inferred from electronic annotation /// 0048814 // regulation of dendrite morphogenesis // inferred from electronic annotation /// 0050770 // regulation of axonogenesis // inferred from electronic annotation /// 0050905 // neuromuscular process // inferred from electronic annotation /// 0051963 // regulation of synapse assembly // inferred from electronic annotation /// 0055074 // calcium ion homeostasis // inferred from sequence or structural similarity /// 0055074 // calcium ion homeostasis // inferred from electronic annotation /// 0060079 // regulation of excitatory postsynaptic membrane potential // inferred from electronic annotation /// 0060079 // regulation of excitatory postsynaptic membrane potential // inferred from sequence or structural similarity /// 0060134 // prepulse inhibition // inferred from electronic annotation /// 0060179 // male mating behavior // inferred from electronic annotation /// 0070588 // calcium ion transmembrane transport // inferred from direct assay /// 0070588 // calcium ion transmembrane transport // inferred from electronic annotation /// 2000463 // positive regulation of excitatory postsynaptic membrane potential // inferred from sequence or structural similarity","0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0008021 // synaptic vesicle // inferred from sequence or structural similarity /// 0009986 // cell surface // inferred from sequence or structural similarity /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0017146 // N-methyl-D-aspartate selective glutamate receptor complex // inferred from direct assay /// 0017146 // N-methyl-D-aspartate selective glutamate receptor complex // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0019717 // synaptosome // inferred from sequence or structural similarity /// 0030054 // cell junction // inferred from electronic annotation /// 0030288 // outer membrane-bounded periplasmic space // inferred from electronic annotation /// 0030425 // dendrite // inferred from direct assay /// 0043083 // synaptic cleft // inferred from sequence or structural similarity /// 0043195 // terminal button // inferred from sequence or structural similarity /// 0043197 // dendritic spine // inferred from sequence or structural similarity /// 0043197 // dendritic spine // inferred from electronic annotation /// 0045202 // synapse // inferred from sequence or structural similarity /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from sequence or structural similarity /// 0060076 // excitatory synapse // inferred from sequence or structural similarity","0004872 // receptor activity // inferred from electronic annotation /// 0004970 // ionotropic glutamate receptor activity // inferred from electronic annotation /// 0004972 // N-methyl-D-aspartate selective glutamate receptor activity // inferred from direct assay /// 0004972 // N-methyl-D-aspartate selective glutamate receptor activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from electronic annotation /// 0005215 // transporter activity // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005234 // extracellular-glutamate-gated ion channel activity // inferred from electronic annotation /// 0005261 // cation channel activity // inferred from electronic annotation /// 0005262 // calcium channel activity // inferred from direct assay /// 0005262 // calcium channel activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005516 // calmodulin binding // inferred from sequence or structural similarity /// 0016594 // glycine binding // inferred from direct assay /// 0016594 // glycine binding // inferred from electronic annotation /// 0016594 // glycine binding // inferred from mutant phenotype /// 0016595 // glutamate binding // inferred from direct assay /// 0042165 // neurotransmitter binding // inferred from sequence or structural similarity","chr9:140033888-140062648 (+) // 96.03 // q34.3"]
["11719784_x_at",-0.0898633,0.0017004013,0.10632038,-0.010047913,-0.0016999245,0.02835226,0.9978758,0.99328995,1.0003589,5.1774684E-4,1.0003589,"up","RPS23",6228.0,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // inferred by curator /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral infectious cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // non-traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0015935 // small ribosomal subunit // inferred from electronic annotation /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr5:81569560-81574396 (-) // 67.09 // q14.2"]
["11716140_x_at",0.03248024,0.021672249,0.099331856,-0.0687418,-0.021672249,-0.050930023,0.27748367,0.024380755,1.0704936,0.09827614,1.0704936,"up","SMS",6611.0,"0006555 // methionine metabolic process // traceable author statement /// 0006595 // polyamine metabolic process // traceable author statement /// 0006597 // spermine biosynthetic process // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005829 // cytosol // traceable author statement","0003824 // catalytic activity // inferred from electronic annotation /// 0004766 // spermidine synthase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016768 // spermine synthase activity // inferred from electronic annotation","chrX:21958622-22012951 (+) // 92.13 // p22.11"]
["11733197_a_at",-0.18639946,0.055716515,0.07271862,-0.055716515,0.13350964,-0.14836788,0.99227804,0.9732508,1.0029179,0.0042034895,1.0029179,"up","KIAA1586",57691.0,"","","0003676 // nucleic acid binding // inferred from electronic annotation","chr6:56911329-56920119 (+) // 85.61 // p12.1"]
["11728613_a_at",-0.4032073,0.022451162,-0.059334517,0.03339219,0.25008678,-0.0224514,0.5918202,0.20525703,-1.1758517,-0.23370612,1.1758517,"down","TRIM10",10107.0,"0030218 // erythrocyte differentiation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:30119721-30128711 (-) // 83.44 // p22.1"]
["11742187_a_at",-0.0784657,0.26433992,0.07846594,-0.19789577,-0.08467722,0.20100784,0.79637206,0.4972406,1.0832016,0.11530183,1.0832016,"up","PRDM16",63976.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0022008 // neurogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // inferred from direct assay /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // inferred from mutant phenotype /// 0030853 // negative regulation of granulocyte differentiation // inferred from direct assay /// 0035019 // somatic stem cell maintenance // inferred from electronic annotation /// 0043457 // regulation of cellular respiration // inferred from sequence or structural similarity /// 0043457 // regulation of cellular respiration // inferred from electronic annotation /// 0043586 // tongue development // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0050872 // white fat cell differentiation // inferred from electronic annotation /// 0050873 // brown fat cell differentiation // inferred from sequence or structural similarity /// 0050873 // brown fat cell differentiation // inferred from electronic annotation /// 0060021 // palate development // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0017053 // transcriptional repressor complex // inferred from sequence or structural similarity /// 0017053 // transcriptional repressor complex // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from sequence or structural similarity /// 0003713 // transcription coactivator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046332 // SMAD binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:2985743-3355183 (+) // 98.56 // p36.32"]
["11718918_x_at",0.08879042,0.050293922,-0.039078712,0.0022678375,-0.0022673607,-0.0054092407,0.7438748,0.40678263,1.0246549,0.03513805,1.0246549,"up","PAK4",10298.0,"0006468 // protein phosphorylation // non-traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006928 // cellular component movement // traceable author statement /// 0007010 // cytoskeleton organization // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0016049 // cell growth // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016477 // cell migration // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // non-traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr19:39616419-39670042 (+) // 94.46 // q13.2"]
["11760799_x_at",-0.025079489,-0.15058064,0.025079489,0.21919823,-0.09327674,0.2055521,0.61808014,0.23338877,-1.1178175,-0.16068469,1.1178175,"down","HLA-DPB1",3115.0,"0002504 // antigen processing and presentation of peptide or polysaccharide antigen via MHC class II // inferred from electronic annotation /// 0006955 // immune response // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0019882 // antigen processing and presentation // inferred from electronic annotation /// 0031295 // T cell costimulation // traceable author statement /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement","0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0042613 // MHC class II protein complex // inferred from electronic annotation","0032395 // MHC class II receptor activity // traceable author statement","chr6:33043734-33054718 (+) // 95.42 // p21.32"]
["11717902_at",0.084121704,0.06125641,0.20604324,-0.077638626,-0.06125641,-0.10598183,0.22034374,0.013187399,1.1477163,0.19876605,1.1477163,"up","IER3IP1",51124.0,"0042981 // regulation of apoptotic process // inferred from mutant phenotype","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr18:44681412-44702735 (-) // 93.75 // q21.1"]
["11716574_at",0.013092041,0.06485462,0.053435326,-0.013092041,-0.015411377,-0.033821106,0.25364968,0.019189976,1.0457723,0.06456878,1.0457723,"up","KDM3A",55818.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0009755 // hormone-mediated signaling pathway // inferred from direct assay /// 0016568 // chromatin modification // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030521 // androgen receptor signaling pathway // inferred from direct assay /// 0033169 // histone H3-K9 demethylation // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0046293 // formaldehyde biosynthetic process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0005506 // iron ion binding // inferred from mutant phenotype /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016702 // oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050681 // androgen receptor binding // inferred from direct assay","chr2:86668264-86720892 (+) // 88.67 // p11.2"]
["11756257_a_at",0.0029501915,-0.038921833,-0.046278,0.012197971,-0.0029506683,0.09100008,0.51643854,0.13825017,-1.0430673,-0.060832296,1.0430673,"down","FLYWCH1",84256.0,"","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:2983149-2999810 (+) // 97.1 // p13.3"]
["11740642_at",0.1217134,-0.13289738,-0.16609931,0.19774985,-0.044720173,0.044720173,0.6994285,0.3389608,-1.0905161,-0.12501106,1.0905161,"down","PLAC8",51316.0,"","","","chr4:84013986-84035911 (-) // 69.65 // q21.22"]
["11752908_a_at",-0.06816006,-0.048462868,0.12602425,0.035479546,0.12871552,-0.035479546,0.8637032,0.63655216,-1.0279509,-0.03977133,1.0279509,"down","TCEA1",6917.0,"0006281 // DNA repair // traceable author statement /// 0006283 // transcription-coupled nucleotide-excision repair // traceable author statement /// 0006289 // nucleotide-excision repair // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006368 // transcription elongation from RNA polymerase II promoter // traceable author statement /// 0006414 // translational elongation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0030218 // erythrocyte differentiation // inferred from electronic annotation /// 0032784 // regulation of transcription elongation, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0050434 // positive regulation of viral transcription // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003746 // translation elongation factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:37317046-37319022 (+) // 98.95 // p22.2 /// chr8:54879729-54934829 (-) // 99.93 // q11.23"]
["11742745_a_at",0.092772484,0.13719082,0.034851074,-0.034851074,-0.14663029,-0.06499767,0.25181615,0.018811652,1.1253947,0.17043108,1.1253947,"up","LOC100509484 /// PLIN2","100509484 /// 123","0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0015909 // long-chain fatty acid transport // inferred from electronic annotation /// 0019915 // lipid storage // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005811 // lipid particle // inferred from direct assay /// 0005811 // lipid particle // inferred from electronic annotation /// 0005811 // lipid particle // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","","chr9:19115323-19127577 (-) // 84.68 // p22.1"]
["11726196_a_at",0.08235717,-0.001116991,-0.016731262,0.058819532,-0.001116991,0.001116991,0.9881413,0.96103466,1.0013154,0.0018964096,1.0013154,"up","SYN2",6854.0,"0007268 // synaptic transmission // traceable author statement /// 0007269 // neurotransmitter secretion // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation","0008021 // synaptic vesicle // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation","chr3:12045836-12233532 (+) // 91.42 // p25.2"]
["11740955_a_at",-0.008783817,0.027101994,-0.02109623,0.24518442,0.008783817,-0.1480918,0.9216195,0.76895845,-1.0254223,-0.036218226,1.0254223,"down","PLEKHN1",84069.0,"","","0005543 // phospholipid binding // inferred from electronic annotation","chr1:901876-910478 (+) // 98.84 // p36.33"]
["11727341_a_at",0.015521526,-0.015521526,0.13165903,-0.11695719,0.16696167,-0.038074017,0.89031523,0.69818074,1.0280493,0.03990952,1.0280493,"up","ATG9B",285973.0,"0000045 // autophagic vacuole assembly // inferred from direct assay /// 0001525 // angiogenesis // inferred from electronic annotation /// 0001542 // ovulation from ovarian follicle // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001974 // blood vessel remodeling // inferred from electronic annotation /// 0001974 // blood vessel remodeling // inferred from sequence or structural similarity /// 0002028 // regulation of sodium ion transport // inferred from electronic annotation /// 0003100 // regulation of systemic arterial blood pressure by endothelin // inferred from mutant phenotype /// 0006527 // arginine catabolic process // inferred from direct assay /// 0006809 // nitric oxide biosynthetic process // inferred from direct assay /// 0006809 // nitric oxide biosynthetic process // inferred from electronic annotation /// 0006914 // autophagy // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from sequence or structural similarity /// 0007005 // mitochondrion organization // inferred from sequence or structural similarity /// 0007165 // signal transduction // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008217 // regulation of blood pressure // non-traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from sequence or structural similarity /// 0009408 // response to heat // non-traceable author statement /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0010288 // response to lead ion // inferred from electronic annotation /// 0010544 // negative regulation of platelet activation // non-traceable author statement /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0014740 // negative regulation of muscle hyperplasia // inferred from electronic annotation /// 0014740 // negative regulation of muscle hyperplasia // inferred from sequence or structural similarity /// 0014806 // smooth muscle hyperplasia // inferred from electronic annotation /// 0014806 // smooth muscle hyperplasia // inferred from sequence or structural similarity /// 0030324 // lung development // inferred from electronic annotation /// 0031284 // positive regulation of guanylate cyclase activity // inferred from mutant phenotype /// 0031284 // positive regulation of guanylate cyclase activity // inferred from sequence or structural similarity /// 0031663 // lipopolysaccharide-mediated signaling pathway // inferred from electronic annotation /// 0032355 // response to estradiol stimulus // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0034097 // response to cytokine stimulus // inferred from electronic annotation /// 0034405 // response to fluid shear stress // inferred from expression pattern /// 0042493 // response to drug // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043200 // response to amino acid stimulus // inferred from electronic annotation /// 0043267 // negative regulation of potassium ion transport // inferred from electronic annotation /// 0043434 // response to peptide hormone stimulus // inferred from electronic annotation /// 0043542 // endothelial cell migration // inferred from mutant phenotype /// 0044281 // small molecule metabolic process // traceable author statement /// 0045471 // response to ethanol // inferred from electronic annotation /// 0045766 // positive regulation of angiogenesis // inferred from electronic annotation /// 0045766 // positive regulation of angiogenesis // inferred from sequence or structural similarity /// 0045909 // positive regulation of vasodilation // non-traceable author statement /// 0046209 // nitric oxide metabolic process // traceable author statement /// 0048662 // negative regulation of smooth muscle cell proliferation // inferred from electronic annotation /// 0050880 // regulation of blood vessel size // inferred from electronic annotation /// 0050880 // regulation of blood vessel size // inferred from sequence or structural similarity /// 0050880 // regulation of blood vessel size // non-traceable author statement /// 0050999 // regulation of nitric-oxide synthase activity // traceable author statement /// 0051346 // negative regulation of hydrolase activity // inferred from electronic annotation /// 0051926 // negative regulation of calcium ion transport // inferred from electronic annotation /// 0055093 // response to hyperoxia // inferred from electronic annotation /// 0055094 // response to lipoprotein stimulus // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0071560 // cellular response to transforming growth factor beta stimulus // inferred from electronic annotation","0000139 // Golgi membrane // traceable author statement /// 0000421 // autophagic vacuole membrane // inferred from electronic annotation /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005901 // caveola // inferred from direct assay /// 0005901 // caveola // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030666 // endocytic vesicle membrane // traceable author statement /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from electronic annotation","0003785 // actin monomer binding // inferred from physical interaction /// 0004517 // nitric-oxide synthase activity // inferred from direct assay /// 0004517 // nitric-oxide synthase activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0010181 // FMN binding // inferred from electronic annotation /// 0010181 // FMN binding // non-traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0020037 // heme binding // inferred from direct assay /// 0020037 // heme binding // inferred from electronic annotation /// 0034617 // tetrahydrobiopterin binding // inferred from direct assay /// 0034618 // arginine binding // inferred from direct assay /// 0046870 // cadmium ion binding // non-traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050660 // flavin adenine dinucleotide binding // inferred from electronic annotation /// 0050660 // flavin adenine dinucleotide binding // non-traceable author statement /// 0050661 // NADP binding // inferred from electronic annotation /// 0050661 // NADP binding // non-traceable author statement","chr7:150709296-150721586 (-) // 98.67 // q36.1"]
["11721178_a_at",0.03441906,-0.09420586,-0.052588463,0.0060253143,0.0082473755,-0.0060253143,0.7079031,0.3513899,-1.0282618,-0.040207602,1.0282618,"down","PITX1",5307.0,"0001501 // skeletal system development // traceable author statement /// 0001501 // skeletal system development // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0014707 // branchiomeric skeletal muscle development // inferred from electronic annotation /// 0021983 // pituitary gland development // inferred from electronic annotation /// 0035116 // embryonic hindlimb morphogenesis // inferred from electronic annotation /// 0035137 // hindlimb morphogenesis // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048625 // myoblast cell fate commitment // inferred from electronic annotation /// 0051216 // cartilage development // inferred from electronic annotation /// 2001141 // regulation of RNA biosynthetic process // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0000988 // protein binding transcription factor activity // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr5:134363423-134369988 (-) // 79.41 // q31.1"]
["11725063_a_at",-0.051237106,0.0063467026,0.11669445,0.009762764,-0.0063467026,-0.043598175,0.8032541,0.5105472,1.026212,0.03732877,1.026212,"up","CNOT10",25904.0,"0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0000289 // nuclear-transcribed mRNA poly(A) tail shortening // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement","0005829 // cytosol // traceable author statement","","chr3:32726636-32815365 (+) // 97.83 // p22.3"]
["11732195_at",-0.0049057007,0.0049057007,0.034796715,-0.011304855,0.041998863,-0.07141113,0.8031529,0.5102814,1.0176005,0.025171336,1.0176005,"up","KPNA4",3840.0,"0006606 // protein import into nucleus // inferred from electronic annotation /// 0006607 // NLS-bearing substrate import into nucleus // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0008565 // protein transporter activity // inferred from electronic annotation","chr3:160217420-160283376 (-) // 97.08 // q25.33"]
["11736510_a_at",0.1154747,0.074705124,-0.065513134,-0.14954662,-0.18117476,0.065513134,0.62587345,0.24281026,1.0942621,0.12995836,1.0942621,"up","IL6R",3570.0,"0002384 // hepatic immune response // traceable author statement /// 0002446 // neutrophil mediated immunity // inferred by curator /// 0002548 // monocyte chemotaxis // inferred by curator /// 0002690 // positive regulation of leukocyte chemotaxis // inferred by curator /// 0002690 // positive regulation of leukocyte chemotaxis // traceable author statement /// 0006953 // acute-phase response // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0010332 // response to gamma radiation // inferred from electronic annotation /// 0010536 // positive regulation of activation of Janus kinase activity // inferred from direct assay /// 0016049 // cell growth // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // inferred from direct assay /// 0019221 // cytokine-mediated signaling pathway // inferred from electronic annotation /// 0031018 // endocrine pancreas development // inferred by curator /// 0031018 // endocrine pancreas development // inferred from mutant phenotype /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0032717 // negative regulation of interleukin-8 production // inferred from expression pattern /// 0032722 // positive regulation of chemokine production // inferred from direct assay /// 0032755 // positive regulation of interleukin-6 production // inferred from direct assay /// 0032966 // negative regulation of collagen biosynthetic process // inferred from direct assay /// 0034097 // response to cytokine stimulus // inferred from direct assay /// 0042517 // positive regulation of tyrosine phosphorylation of Stat3 protein // inferred from mutant phenotype /// 0042517 // positive regulation of tyrosine phosphorylation of Stat3 protein // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043410 // positive regulation of MAPK cascade // inferred from direct assay /// 0043434 // response to peptide hormone stimulus // inferred from electronic annotation /// 0045471 // response to ethanol // inferred from electronic annotation /// 0045669 // positive regulation of osteoblast differentiation // traceable author statement /// 0045768 // positive regulation of anti-apoptosis // inferred from mutant phenotype /// 0046427 // positive regulation of JAK-STAT cascade // inferred from electronic annotation /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from direct assay /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0050829 // defense response to Gram-negative bacterium // inferred from expression pattern /// 0050830 // defense response to Gram-positive bacterium // inferred from expression pattern /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation /// 0051591 // response to cAMP // inferred from electronic annotation /// 0070102 // interleukin-6-mediated signaling pathway // inferred from direct assay /// 0070102 // interleukin-6-mediated signaling pathway // inferred from mutant phenotype /// 0070102 // interleukin-6-mediated signaling pathway // inferred from electronic annotation /// 0070120 // ciliary neurotrophic factor-mediated signaling pathway // inferred from mutant phenotype","0005576 // extracellular region // inferred from direct assay /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005896 // interleukin-6 receptor complex // inferred from direct assay /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from direct assay","0004872 // receptor activity // inferred from electronic annotation /// 0004896 // cytokine receptor activity // inferred from electronic annotation /// 0004897 // ciliary neurotrophic factor receptor activity // inferred from mutant phenotype /// 0004915 // interleukin-6 receptor activity // inferred from direct assay /// 0004915 // interleukin-6 receptor activity // inferred from electronic annotation /// 0005138 // interleukin-6 receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0019981 // interleukin-6 binding // inferred from physical interaction /// 0019981 // interleukin-6 binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0070119 // ciliary neurotrophic factor binding // inferred from physical interaction","chr1:154377625-154440805 (+) // 89.7 // q21.3"]
["11727773_at",-0.04033184,-0.049212933,-0.010648251,0.41234207,0.010648727,0.24940681,0.4465164,0.09297819,-1.1954305,-0.25753027,1.1954305,"down","LARP6",55323.0,"0006396 // RNA processing // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation","chr15:71143765-71146498 (-) // 54.42 // q23"]
["11762527_at",-0.15148401,0.16178513,-0.11361313,-0.010294914,0.010294914,0.0565753,0.8587253,0.6245705,-1.0376326,-0.05329569,1.0376326,"down","LINC00315",246704.0,"","","","chr21:46720159-46725172 (-) // 83.93 // q22.3"]
["11730559_a_at",-0.045529366,0.029335976,0.1432457,0.1706171,-0.029335976,-0.0348258,0.98253775,0.94093156,1.0047703,0.006865695,1.0047703,"up","BCO2",83875.0,"0016116 // carotenoid metabolic process // inferred from sequence or structural similarity /// 0016119 // carotene metabolic process // inferred from direct assay /// 0016119 // carotene metabolic process // inferred from electronic annotation /// 0016121 // carotene catabolic process // inferred from direct assay /// 0042573 // retinoic acid metabolic process // non-traceable author statement /// 0042574 // retinal metabolic process // non-traceable author statement /// 0051881 // regulation of mitochondrial membrane potential // inferred from sequence or structural similarity /// 0055114 // oxidation-reduction process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 2000377 // regulation of reactive oxygen species metabolic process // inferred from sequence or structural similarity","0005622 // intracellular // inferred by curator /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005739 // mitochondrion // traceable author statement","0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016702 // oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen // inferred from direct assay /// 0016702 // oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:112046478-112089647 (+) // 88.66 // q23.1"]
["11752773_a_at",0.064985275,0.017372131,-0.00689888,-0.25234318,0.00689888,-0.24259758,0.45514718,0.09814298,1.1390519,0.1878335,1.1390519,"up","PAX4",5078.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0009887 // organ morphogenesis // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0031018 // endocrine pancreas development // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr7:127250990-127255724 (-) // 96.93 // q32.1"]
["11740322_at",0.13032055,-0.08895731,-0.3151884,0.008108616,0.14953041,-0.008108616,0.7162843,0.36434764,-1.1027597,-0.14111847,1.1027597,"down","KLK3",354.0,"0006508 // proteolysis // inferred from electronic annotation /// 0006508 // proteolysis // non-traceable author statement /// 0016525 // negative regulation of angiogenesis // non-traceable author statement","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // traceable author statement /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr19:51358193-51363386 (+) // 68.45 // q13.33"]
["11741629_a_at",0.11811209,0.01314497,0.089095116,-0.07706976,-0.013144493,-0.036070824,0.31343502,0.033872724,1.0833848,0.11554569,1.0833848,"up","POLR3H",171568.0,"0006139 // nucleobase-containing compound metabolic process // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006383 // transcription from RNA polymerase III promoter // inferred from direct assay /// 0006383 // transcription from RNA polymerase III promoter // traceable author statement /// 0006385 // transcription elongation from RNA polymerase III promoter // traceable author statement /// 0006386 // termination of RNA polymerase III transcription // traceable author statement /// 0009615 // response to virus // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005666 // DNA-directed RNA polymerase III complex // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003899 // DNA-directed RNA polymerase activity // inferred from direct assay /// 0003899 // DNA-directed RNA polymerase activity // inferred from electronic annotation","chr22:41921807-41940479 (-) // 97.91 // q13.2"]
["11731019_x_at",-0.06587219,0.02508831,0.11273098,0.0228827,-0.11148715,-0.022882462,0.73945296,0.39957562,1.0432932,0.06114471,1.0432932,"up","AIF1",199.0,"0001774 // microglial cell activation // non-traceable author statement /// 0001934 // positive regulation of protein phosphorylation // inferred from electronic annotation /// 0006911 // phagocytosis, engulfment // inferred from sequence or structural similarity /// 0006911 // phagocytosis, engulfment // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from sequence or structural similarity /// 0006954 // inflammatory response // non-traceable author statement /// 0010629 // negative regulation of gene expression // inferred from electronic annotation /// 0014739 // positive regulation of muscle hyperplasia // inferred from electronic annotation /// 0016601 // Rac protein signal transduction // inferred from sequence or structural similarity /// 0016601 // Rac protein signal transduction // inferred from electronic annotation /// 0030041 // actin filament polymerization // inferred from direct assay /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0031668 // cellular response to extracellular stimulus // inferred from electronic annotation /// 0032870 // cellular response to hormone stimulus // inferred from electronic annotation /// 0034097 // response to cytokine stimulus // inferred from electronic annotation /// 0042102 // positive regulation of T cell proliferation // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0045429 // positive regulation of nitric oxide biosynthetic process // inferred from electronic annotation /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from direct assay /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from electronic annotation /// 0048662 // negative regulation of smooth muscle cell proliferation // inferred from direct assay /// 0048678 // response to axon injury // inferred from electronic annotation /// 0051017 // actin filament bundle assembly // inferred from direct assay /// 0051017 // actin filament bundle assembly // inferred from electronic annotation /// 0051602 // response to electrical stimulus // inferred from electronic annotation /// 0070887 // cellular response to chemical stimulus // inferred from electronic annotation /// 0071346 // cellular response to interferon-gamma // inferred from expression pattern /// 0071346 // cellular response to interferon-gamma // inferred from sequence or structural similarity /// 0071672 // negative regulation of smooth muscle cell chemotaxis // inferred from direct assay /// 0071673 // positive regulation of smooth muscle cell chemotaxis // inferred from direct assay /// 0090026 // positive regulation of monocyte chemotaxis // inferred from direct assay /// 0097178 // ruffle assembly // inferred from sequence or structural similarity /// 0097178 // ruffle assembly // non-traceable author statement /// 0097178 // ruffle assembly // inferred from electronic annotation /// 1900087 // positive regulation of G1/S transition of mitotic cell cycle // inferred from direct assay /// 2000406 // positive regulation of T cell migration // inferred from direct assay","0001726 // ruffle // inferred from electronic annotation /// 0001891 // phagocytic cup // inferred from sequence or structural similarity /// 0001891 // phagocytic cup // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005884 // actin filament // inferred from direct assay /// 0005884 // actin filament // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from sequence or structural similarity /// 0030027 // lamellipodium // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from direct assay /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043204 // perikaryon // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0003779 // actin binding // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from sequence or structural similarity /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0051015 // actin filament binding // inferred from direct assay","chr6:31583785-31584802 (+) // 91.8 // p21.33"]
["11740957_x_at",0.006357193,-0.030011177,-0.006357193,-0.043559074,0.0066051483,0.07410908,0.8311715,0.564766,-1.0156398,-0.02238881,1.0156398,"down","SLC2A6",11182.0,"0006810 // transport // inferred from electronic annotation /// 0008643 // carbohydrate transport // inferred from electronic annotation /// 0015758 // glucose transport // non-traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation /// 0005355 // glucose transmembrane transporter activity // non-traceable author statement /// 0022857 // transmembrane transporter activity // inferred from electronic annotation /// 0022891 // substrate-specific transmembrane transporter activity // inferred from electronic annotation","chr9:136336216-136344276 (-) // 86.18 // q34.2"]
["11719202_a_at",-0.022499084,-0.053590775,0.06735134,0.022499084,0.08612156,-0.0383749,0.8628685,0.6332722,-1.0184168,-0.02632807,1.0184168,"down","MORN2",729967.0,"","","","chr2:39103102-39109848 (+) // 97.38 // p22.1"]
["11725936_a_at",-0.03864479,-0.04631877,0.038644552,0.16845703,0.094878435,-0.1792438,0.8966756,0.7109422,-1.0305898,-0.043470245,1.0305898,"down","CAMK2A",815.0,"0000082 // G1/S transition of mitotic cell cycle // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0046777 // protein autophosphorylation // inferred from electronic annotation /// 0046928 // regulation of neurotransmitter secretion // inferred from electronic annotation /// 0048168 // regulation of neuronal synaptic plasticity // inferred from electronic annotation /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from mutant phenotype /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement","0005654 // nucleoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005954 // calcium- and calmodulin-dependent protein kinase complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030666 // endocytic vesicle membrane // traceable author statement /// 0042734 // presynaptic membrane // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004683 // calmodulin-dependent protein kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from direct assay /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0035254 // glutamate receptor binding // inferred from electronic annotation","chr5:149598961-149669403 (-) // 93.98 // q32"]
["11731621_at",0.030945301,-0.046567917,0.0540905,-0.043937206,0.050775528,-0.030945301,0.8697014,0.6491944,1.0145628,0.020858232,1.0145628,"up","ZNF91",7644.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0008270 // zinc ion binding // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:23540498-23578362 (-) // 90.9 // p12"]
["11721382_at",0.080709934,-0.0059108734,-0.25239587,-0.05766344,0.0059108734,0.19716167,0.76432526,0.4402433,-1.0774857,-0.1076687,1.0774857,"down","ATG2B",55102.0,"","","","chr14:96747594-96829701 (-) // 99.76 // q32.2"]
["11762724_at",0.07278538,-0.023156166,0.11016321,-0.008687258,0.008687258,-0.06569147,0.55978286,0.1747818,1.0534788,0.07516133,1.0534788,"up","PCDP1",200373.0,"","0005929 // cilium // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005516 // calmodulin binding // inferred from electronic annotation","chr2:120302060-120331046 (+) // 99.93 // q14.2"]
["11717006_a_at",0.031027317,-0.048811913,-0.031027794,-0.22230816,0.10360193,0.053754807,0.9883337,0.96130186,1.0037359,0.0053797215,1.0037359,"up","POLDIP3",84271.0,"0006417 // regulation of translation // inferred from electronic annotation /// 0045727 // positive regulation of translation // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation /// 0035145 // exon-exon junction complex // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr22:42979726-43010924 (-) // 92.82 // q13.2"]
["11722006_a_at",-0.074465275,-0.04551363,0.2760334,0.064342976,-0.013071537,0.013071537,0.9343391,0.8028382,1.021416,0.03057049,1.021416,"up","KLHL25",64410.0,"","0005737 // cytoplasm // inferred from direct assay","","chr15:86302556-86338261 (-) // 99.5 // q25.3"]
["11725083_s_at",0.09498119,0.029964924,0.0036735535,-0.0036735535,-0.12734556,-0.17117357,0.39759907,0.0654687,1.1046613,0.14360414,1.1046613,"up","HDAC6",10013.0,"0000209 // protein polyubiquitination // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006476 // protein deacetylation // inferred from mutant phenotype /// 0006476 // protein deacetylation // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006515 // misfolded or incompletely synthesized protein catabolic process // inferred from mutant phenotype /// 0006886 // intracellular protein transport // inferred from mutant phenotype /// 0006914 // autophagy // inferred from electronic annotation /// 0007026 // negative regulation of microtubule depolymerization // inferred from electronic annotation /// 0009636 // response to toxin // inferred from mutant phenotype /// 0009967 // positive regulation of signal transduction // inferred from mutant phenotype /// 0010033 // response to organic substance // inferred from mutant phenotype /// 0010469 // regulation of receptor activity // inferred from mutant phenotype /// 0010634 // positive regulation of epithelial cell migration // inferred from mutant phenotype /// 0010727 // negative regulation of hydrogen peroxide metabolic process // inferred by curator /// 0010870 // positive regulation of receptor biosynthetic process // inferred from mutant phenotype /// 0016236 // macroautophagy // inferred from mutant phenotype /// 0016568 // chromatin modification // inferred from electronic annotation /// 0016575 // histone deacetylation // inferred from direct assay /// 0016575 // histone deacetylation // inferred from sequence or structural similarity /// 0016575 // histone deacetylation // inferred from electronic annotation /// 0032418 // lysosome localization // inferred from mutant phenotype /// 0034983 // peptidyl-lysine deacetylation // inferred from mutant phenotype /// 0035967 // cellular response to topologically incorrect protein // inferred from mutant phenotype /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0043162 // ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway // inferred from electronic annotation /// 0043242 // negative regulation of protein complex disassembly // inferred from mutant phenotype /// 0045861 // negative regulation of proteolysis // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0051354 // negative regulation of oxidoreductase activity // inferred by curator /// 0051788 // response to misfolded protein // inferred from mutant phenotype /// 0060632 // regulation of microtubule-based movement // inferred by curator /// 0060765 // regulation of androgen receptor signaling pathway // traceable author statement /// 0070301 // cellular response to hydrogen peroxide // inferred from mutant phenotype /// 0070842 // aggresome assembly // inferred from mutant phenotype /// 0070842 // aggresome assembly // inferred from electronic annotation /// 0070845 // polyubiquitinated misfolded protein transport // inferred from mutant phenotype /// 0070846 // Hsp90 deacetylation // inferred from mutant phenotype /// 0070846 // Hsp90 deacetylation // inferred from electronic annotation /// 0070848 // response to growth factor stimulus // inferred from mutant phenotype /// 0071218 // cellular response to misfolded protein // inferred from electronic annotation /// 0090035 // positive regulation of chaperone-mediated protein complex assembly // inferred from mutant phenotype /// 0090042 // tubulin deacetylation // inferred from direct assay /// 0090042 // tubulin deacetylation // inferred from sequence or structural similarity /// 0090042 // tubulin deacetylation // inferred from electronic annotation","0000118 // histone deacetylase complex // inferred from direct assay /// 0005622 // intracellular // inferred from mutant phenotype /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0005875 // microtubule associated complex // inferred from direct assay /// 0005881 // cytoplasmic microtubule // inferred from electronic annotation /// 0005901 // caveola // inferred from direct assay /// 0016234 // inclusion body // inferred from direct assay /// 0016235 // aggresome // inferred from direct assay /// 0030286 // dynein complex // inferred from direct assay /// 0031252 // cell leading edge // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0003779 // actin binding // inferred from electronic annotation /// 0004407 // histone deacetylase activity // inferred from direct assay /// 0004407 // histone deacetylase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008013 // beta-catenin binding // inferred from physical interaction /// 0008017 // microtubule binding // inferred from direct assay /// 0008017 // microtubule binding // inferred from sequence or structural similarity /// 0008017 // microtubule binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from sequence or structural similarity /// 0031078 // histone deacetylase activity (H3-K14 specific) // inferred from electronic annotation /// 0031593 // polyubiquitin binding // inferred from direct assay /// 0032041 // NAD-dependent histone deacetylase activity (H3-K14 specific) // inferred from electronic annotation /// 0032129 // histone deacetylase activity (H3-K9 specific) // inferred from electronic annotation /// 0034739 // histone deacetylase activity (H4-K16 specific) // inferred from electronic annotation /// 0042826 // histone deacetylase binding // inferred from physical interaction /// 0042903 // tubulin deacetylase activity // inferred from direct assay /// 0042903 // tubulin deacetylase activity // inferred from sequence or structural similarity /// 0042903 // tubulin deacetylase activity // inferred from electronic annotation /// 0043014 // alpha-tubulin binding // inferred from direct assay /// 0043130 // ubiquitin binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046969 // NAD-dependent histone deacetylase activity (H3-K9 specific) // inferred from electronic annotation /// 0046970 // NAD-dependent histone deacetylase activity (H4-K16 specific) // inferred from electronic annotation /// 0048156 // tau protein binding // inferred from direct assay /// 0048487 // beta-tubulin binding // inferred from electronic annotation /// 0051879 // Hsp90 protein binding // inferred from direct assay /// 0070840 // dynein complex binding // inferred from direct assay","chrX:48660106-48683380 (+) // 96.69 // p11.23"]
["11763782_a_at",0.0018758774,-0.0018758774,-0.11299515,0.09000492,-0.2071476,0.018325806,0.98894,0.9635267,-1.0032812,-0.004726073,1.0032812,"down","TTC5",91875.0,"0006281 // DNA repair // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","","chr14:20757687-20774119 (-) // 97.02 // q11.2"]
["11738851_a_at",0.016703606,0.10073376,-0.15294218,0.008687019,-0.046871185,-0.008687019,0.98882514,0.96282077,1.0026296,0.0037887858,1.0026296,"up","MMP16",4325.0,"0006508 // proteolysis // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0030574 // collagen catabolic process // inferred from electronic annotation /// 0043085 // positive regulation of catalytic activity // traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005796 // Golgi lumen // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from electronic annotation","0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0004222 // metalloendopeptidase activity // traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0008047 // enzyme activator activity // traceable author statement /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008270 // zinc ion binding // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:89086832-89339717 (-) // 81.27 // q21.3"]
["11763387_s_at",0.01845932,0.0017604828,-0.0017604828,0.0022735596,-0.017383575,-0.04690075,0.5440701,0.16048388,1.0187664,0.026823288,1.0187664,"up","CDK8",1024.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007219 // Notch signaling pathway // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0016592 // mediator complex // inferred from direct assay /// 0016592 // mediator complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004693 // cyclin-dependent protein kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008353 // RNA polymerase II carboxy-terminal domain kinase activity // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr13:26978833-26979372 (+) // 98.18 // q12.13"]
["11755474_a_at",0.046764374,0.03711319,-0.011003494,-0.067240715,-0.014204979,0.011003494,0.5618589,0.17682241,1.0336674,0.04777211,1.0336674,"up","ADAM15",8751.0,"0001525 // angiogenesis // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007160 // cell-matrix adhesion // traceable author statement /// 0007229 // integrin-mediated signaling pathway // inferred from electronic annotation /// 0030574 // collagen catabolic process // inferred from electronic annotation /// 0042246 // tissue regeneration // inferred from electronic annotation /// 0060317 // cardiac epithelial to mesenchymal transition // inferred from electronic annotation","0001669 // acrosomal vesicle // inferred from electronic annotation /// 0005912 // adherens junction // inferred from electronic annotation /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0019861 // flagellum // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from direct assay /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from physical interaction /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:155023791-155035245 (+) // 99.48 // q22"]
["11744672_a_at",0.020999908,-0.028096199,-0.03557968,-0.020999908,0.12946129,0.083951,0.5624708,0.17756975,-1.0558192,-0.07836274,1.0558192,"down","MORN4",118812.0,"","","","chr10:99379152-99393557 (-) // 97.89 // q24.2"]
["11747922_a_at",-0.037195206,-0.0072698593,0.0072698593,0.018857002,-0.031316757,0.045700073,0.75181884,0.41907215,-1.0164073,-0.023478573,1.0164073,"down","RBFOX2",23543.0,"0000381 // regulation of alternative nuclear mRNA splicing, via spliceosome // inferred from sequence or structural similarity /// 0000381 // regulation of alternative nuclear mRNA splicing, via spliceosome // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010724 // regulation of definitive erythrocyte differentiation // inferred from electronic annotation /// 0016070 // RNA metabolic process // traceable author statement /// 0030520 // intracellular estrogen receptor signaling pathway // inferred from direct assay /// 0042127 // regulation of cell proliferation // traceable author statement /// 0043484 // regulation of RNA splicing // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003714 // transcription corepressor activity // inferred from direct assay /// 0003723 // RNA binding // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from direct assay","chr22:36140234-36236460 (-) // 86.22 // q12.3"]
["11729295_at",0.017049313,-0.010735512,0.011752605,-0.065041065,-0.018222332,0.010735512,0.6477027,0.2709479,1.0211524,0.030198162,1.0211524,"up","TMCO7",79613.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr16:68877449-69119315 (+) // 99.69 // q22.1"]
["11716768_a_at",-0.06040573,-0.020514488,-0.016399384,0.016399384,0.0879755,0.08488369,0.2785302,0.0247759,-1.068455,-0.09552612,1.068455,"down","UBQLN2",29978.0,"0008219 // cell death // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chrX:56590062-56593494 (+) // 92.18 // p11.21"]
["11744546_a_at",-0.16236258,0.0075702667,0.05418873,-0.0075702667,-0.016720772,0.16152763,0.7503205,0.41704726,-1.0564907,-0.07928001,1.0564907,"down","PROZ",8858.0,"0006508 // proteolysis // traceable author statement /// 0007596 // blood coagulation // inferred from electronic annotation /// 0007599 // hemostasis // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0017187 // peptidyl-glutamic acid carboxylation // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0005796 // Golgi lumen // traceable author statement","0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation","chr13:113812967-113826697 (+) // 98.48 // q34"]
["11717933_a_at",-0.05590439,-0.14907646,0.1658392,-0.04941511,0.08102226,0.04941511,0.8973028,0.71279216,-1.0281528,-0.04005472,1.0281528,"down","DNAL4",10126.0,"0007017 // microtubule-based process // inferred from electronic annotation /// 0007018 // microtubule-based movement // non-traceable author statement /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005858 // axonemal dynein complex // non-traceable author statement /// 0005874 // microtubule // inferred from electronic annotation /// 0005875 // microtubule associated complex // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005929 // cilium // inferred from electronic annotation /// 0030286 // dynein complex // inferred from electronic annotation /// 0035085 // cilium axoneme // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0003774 // motor activity // inferred from electronic annotation /// 0003777 // microtubule motor activity // non-traceable author statement /// 0042623 // ATPase activity, coupled // non-traceable author statement","chr22:39174512-39190178 (-) // 97.79 // q13.1"]
["11720420_at",0.07292271,0.060272217,0.22675323,-0.060272217,-0.22506714,-0.35321808,0.29604933,0.02938617,1.2594861,0.33283517,1.2594861,"up","AFF4",27125.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0007286 // spermatid development // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay","0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr5:132211075-132299354 (-) // 98.62 // q31.1"]
["11755888_a_at",0.20674086,0.059610605,0.013521433,-0.084784985,-0.02507472,-0.013521433,0.45372576,0.097183384,1.0976499,0.13441801,1.0976499,"up","RGN",9104.0,"0006874 // cellular calcium ion homeostasis // inferred from sequence or structural similarity /// 0006874 // cellular calcium ion homeostasis // inferred from electronic annotation /// 0032781 // positive regulation of ATPase activity // inferred from sequence or structural similarity /// 0032781 // positive regulation of ATPase activity // inferred from electronic annotation /// 0050848 // regulation of calcium-mediated signaling // inferred from sequence or structural similarity /// 0050848 // regulation of calcium-mediated signaling // inferred from electronic annotation","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation","0004341 // gluconolactonase activity // inferred from direct assay /// 0004341 // gluconolactonase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from direct assay /// 0005509 // calcium ion binding // inferred from sequence or structural similarity /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005509 // calcium ion binding // traceable author statement /// 0008270 // zinc ion binding // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0030234 // enzyme regulator activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chrX:46937816-46952712 (+) // 97.15 // p11.23"]
["11740463_at",-0.054502726,0.046120644,-0.029214382,-0.0077705383,0.0077705383,0.046120644,0.77685267,0.4603554,-1.019531,-0.02790566,1.019531,"down","SYCE1L",1.00130958E8,"0007126 // meiosis // inferred from electronic annotation","","","chr16:77233293-77246955 (+) // 95.34 // q23.1"]
["11757352_a_at",0.008516312,-0.067988396,0.009198189,-0.008516312,-0.014805794,0.047961235,0.7910052,0.48478794,-1.0174593,-0.024971047,1.0174593,"down","TRMT1",55621.0,"0008033 // tRNA processing // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation","","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0004809 // tRNA (guanine-N2-)-methyltransferase activity // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:13215720-13227573 (-) // 97.78 // p13.2"]
["11717596_s_at",0.0363369,0.010926247,-0.008115768,-0.0042381287,-0.014763832,0.0042381287,0.64514625,0.26859894,1.012534,0.017970385,1.012534,"up","GNAS",2778.0,"0001501 // skeletal system development // inferred from electronic annotation /// 0001894 // tissue homeostasis // inferred from electronic annotation /// 0001958 // endochondral ossification // inferred from electronic annotation /// 0006112 // energy reserve metabolic process // inferred from electronic annotation /// 0006112 // energy reserve metabolic process // traceable author statement /// 0006171 // cAMP biosynthetic process // traceable author statement /// 0006184 // GTP catabolic process // not recorded /// 0006184 // GTP catabolic process // traceable author statement /// 0006184 // GTP catabolic process // non-traceable author statement /// 0006306 // DNA methylation // inferred from electronic annotation /// 0006833 // water transport // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007189 // adenylate cyclase-activating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007189 // adenylate cyclase-activating G-protein coupled receptor signaling pathway // non-traceable author statement /// 0007190 // activation of adenylate cyclase activity // traceable author statement /// 0007191 // adenylate cyclase-activating dopamine receptor signaling pathway // not recorded /// 0007191 // adenylate cyclase-activating dopamine receptor signaling pathway // inferred from sequence or structural similarity /// 0007565 // female pregnancy // non-traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0007606 // sensory perception of chemical stimulus // not recorded /// 0007608 // sensory perception of smell // traceable author statement /// 0007610 // behavior // inferred from electronic annotation /// 0009306 // protein secretion // non-traceable author statement /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0035116 // embryonic hindlimb morphogenesis // inferred from electronic annotation /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0040032 // post-embryonic body morphogenesis // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0043588 // skin development // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0045669 // positive regulation of osteoblast differentiation // inferred from electronic annotation /// 0045672 // positive regulation of osteoclast differentiation // inferred from electronic annotation /// 0046907 // intracellular transport // non-traceable author statement /// 0048701 // embryonic cranial skeleton morphogenesis // inferred from electronic annotation /// 0050796 // regulation of insulin secretion // traceable author statement /// 0051216 // cartilage development // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0071377 // cellular response to glucagon stimulus // traceable author statement /// 0071380 // cellular response to prostaglandin E stimulus // inferred from sequence or structural similarity /// 0071514 // genetic imprinting // inferred from electronic annotation /// 0071870 // cellular response to catecholamine stimulus // inferred from sequence or structural similarity","0001726 // ruffle // inferred from electronic annotation /// 0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005622 // intracellular // non-traceable author statement /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005834 // heterotrimeric G-protein complex // not recorded /// 0005834 // heterotrimeric G-protein complex // inferred from sequence or structural similarity /// 0005834 // heterotrimeric G-protein complex // traceable author statement /// 0005834 // heterotrimeric G-protein complex // non-traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0030133 // transport vesicle // inferred from electronic annotation /// 0031224 // intrinsic to membrane // inferred from direct assay /// 0031234 // extrinsic to internal side of plasma membrane // not recorded /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0032588 // trans-Golgi network membrane // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // not recorded /// 0003924 // GTPase activity // traceable author statement /// 0003924 // GTPase activity // non-traceable author statement /// 0004016 // adenylate cyclase activity // traceable author statement /// 0004871 // signal transducer activity // not recorded /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0005525 // GTP binding // non-traceable author statement /// 0019001 // guanyl nucleotide binding // inferred from electronic annotation /// 0031683 // G-protein beta/gamma-subunit complex binding // not recorded /// 0031852 // mu-type opioid receptor binding // not recorded /// 0035255 // ionotropic glutamate receptor binding // not recorded /// 0046872 // metal ion binding // inferred from electronic annotation","chr20:57427784-57486247 (+) // 97.48 // q13.32"]
["11715587_at",0.029022217,0.043395996,0.03793907,-0.07182121,-0.029022217,-0.091448784,0.16465795,0.005934627,1.0724298,0.10088318,1.0724298,"up","MAPRE1",22919.0,"0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000087 // M phase of mitotic cell cycle // traceable author statement /// 0000236 // mitotic prometaphase // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0031115 // negative regulation of microtubule polymerization // inferred from direct assay /// 0035372 // protein localization to microtubule // inferred from direct assay /// 0051301 // cell division // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0005874 // microtubule // inferred from electronic annotation /// 0005881 // cytoplasmic microtubule // inferred from electronic annotation /// 0030981 // cortical microtubule cytoskeleton // inferred from direct assay /// 0031253 // cell projection membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // inferred from electronic annotation /// 0008022 // protein C-terminus binding // traceable author statement /// 0051010 // microtubule plus-end binding // inferred from direct assay /// 0051010 // microtubule plus-end binding // inferred from electronic annotation","chr20:31407696-31438163 (+) // 90.39 // q11.21"]
["11755189_a_at",0.0026826859,-0.07775974,-0.011696339,0.0074892044,0.03851223,-0.0026826859,0.57843703,0.19244422,-1.030514,-0.043364108,1.030514,"down","TMEM175",84286.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr4:926265-952438 (+) // 96.82 // p16.3"]
["11747124_at",-0.0017831326,0.063670635,-0.18074489,0.04313588,0.001783371,-0.025255919,0.83529794,0.57487875,-1.0325228,-0.046173636,1.0325228,"down","LOC100293612",1.00293612E8,"","","","chr3:13688451-13696011 (-) // 52.69 // p25.1"]
["11716920_at",0.032528162,-0.0325284,0.21158028,0.0711658,-0.093988895,-0.122396946,0.65240616,0.27751338,1.0859317,0.11893331,1.0859317,"up","PLVAP",83483.0,"","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005901 // caveola // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0042803 // protein homodimerization activity // inferred from electronic annotation","chr19:17462257-17488160 (-) // 97.09 // p13.11"]
["11758559_s_at",0.051885605,-0.12230587,0.02690506,0.038230896,-0.02690506,-0.15087557,0.8921247,0.70138216,1.0224367,0.03201158,1.0224367,"up","NUDT4 /// NUDT4P1","11163 /// 440672","0009187 // cyclic nucleotide metabolic process // traceable author statement /// 0019722 // calcium-mediated signaling // traceable author statement /// 0019935 // cyclic-nucleotide-mediated signaling // traceable author statement /// 0035556 // intracellular signal transduction // non-traceable author statement /// 0046831 // regulation of RNA export from nucleus // traceable author statement /// 0046907 // intracellular transport // traceable author statement","0005622 // intracellular // non-traceable author statement /// 0005622 // intracellular // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation","0008486 // diphosphoinositol-polyphosphate diphosphatase activity // inferred from direct assay /// 0008486 // diphosphoinositol-polyphosphate diphosphatase activity // inferred from electronic annotation /// 0008486 // diphosphoinositol-polyphosphate diphosphatase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0052840 // inositol diphosphate tetrakisphosphate diphosphatase activity // inferred from electronic annotation /// 0052841 // inositol bisdiphosphate tetrakisphosphate diphosphatase activity // inferred from electronic annotation /// 0052842 // inositol diphosphate pentakisphosphate diphosphatase activity // inferred from electronic annotation /// 0052843 // inositol-1-diphosphate-2,3,4,5,6-pentakisphosphate diphosphatase activity // inferred from electronic annotation /// 0052844 // inositol-3-diphosphate-1,2,4,5,6-pentakisphosphate diphosphatase activity // inferred from electronic annotation /// 0052845 // inositol-5-diphosphate-1,2,3,4,6-pentakisphosphate diphosphatase activity // inferred from electronic annotation /// 0052846 // inositol-1,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 1-diphosphatase activity // inferred from electronic annotation /// 0052847 // inositol-1,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 5-diphosphatase activity // inferred from electronic annotation /// 0052848 // inositol-3,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 5-diphosphatase activity // inferred from electronic annotation","chr12:93793475-93793896 (+) // 99.76 // q22 /// chr1:145138283-145138704 (-) // 100.0 // q21.1"]
["11742977_a_at",-0.21355343,0.088466644,0.037997723,0.18496513,-0.3979168,-0.037997723,0.9301063,0.7920477,1.0385855,0.05462005,1.0385855,"up","GNAO1",2775.0,"0006184 // GTP catabolic process // not recorded /// 0006184 // GTP catabolic process // traceable author statement /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006936 // muscle contraction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007188 // adenylate cyclase-modulating G-protein coupled receptor signaling pathway // not recorded /// 0007212 // dopamine receptor signaling pathway // not recorded /// 0007212 // dopamine receptor signaling pathway // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0008016 // regulation of heart contraction // inferred from electronic annotation /// 0009987 // cellular process // inferred from electronic annotation /// 0010243 // response to organic nitrogen // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from electronic annotation /// 0034097 // response to cytokine stimulus // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042542 // response to hydrogen peroxide // inferred from electronic annotation /// 0043278 // response to morphine // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0051926 // negative regulation of calcium ion transport // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005834 // heterotrimeric G-protein complex // not recorded /// 0005886 // plasma membrane // traceable author statement /// 0019717 // synaptosome // inferred from electronic annotation /// 0031234 // extrinsic to internal side of plasma membrane // not recorded /// 0043234 // protein complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // not recorded /// 0003924 // GTPase activity // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0004871 // signal transducer activity // not recorded /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0019001 // guanyl nucleotide binding // inferred from electronic annotation /// 0031683 // G-protein beta/gamma-subunit complex binding // not recorded /// 0031821 // G-protein coupled serotonin receptor binding // not recorded /// 0031821 // G-protein coupled serotonin receptor binding // inferred from electronic annotation /// 0031852 // mu-type opioid receptor binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:56225250-56391355 (+) // 93.09 // q12.2"]
["11750955_a_at",-0.023567438,-0.021427155,0.21132398,0.08728862,0.021427155,-0.13222766,0.8321644,0.566822,1.0448388,0.06328036,1.0448388,"up","GABRR1",2569.0,"0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006821 // chloride transport // inferred from electronic annotation /// 0007214 // gamma-aminobutyric acid signaling pathway // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0034220 // ion transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0034707 // chloride channel complex // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004890 // GABA-A receptor activity // inferred from electronic annotation /// 0004890 // GABA-A receptor activity // traceable author statement /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005230 // extracellular ligand-gated ion channel activity // inferred from electronic annotation /// 0005254 // chloride channel activity // inferred from electronic annotation /// 0016917 // GABA receptor activity // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr6:89888317-89931166 (-) // 92.72 // q15"]
["11756544_a_at",0.041589737,0.057384968,0.006046772,-0.05651474,-0.033109188,-0.006046772,0.3124196,0.03359719,1.0474616,0.06689739,1.0474616,"up","C22orf29",79680.0,"","","","chr22:19833670-19842386 (-) // 45.85 // q11.21"]
["11717607_at",0.040877342,-0.08725357,-0.22392464,-0.040877342,0.09814167,0.09458923,0.575369,0.18941754,-1.1024537,-0.14071807,1.1024537,"down","VMA21",203547.0,"0070072 // vacuolar proton-transporting V-type ATPase complex assembly // inferred from direct assay","0005764 // lysosome // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0012507 // ER to Golgi transport vesicle membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030127 // COPII vesicle coat // inferred from direct assay /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0033116 // endoplasmic reticulum-Golgi intermediate compartment membrane // inferred from electronic annotation","","chrX:150565675-150577836 (+) // 74.51 // q28"]
["11726359_a_at",-0.01859951,0.020097733,0.02428627,-0.065574646,0.01859951,-0.043510437,0.62953895,0.24766411,1.0272282,0.038756765,1.0272282,"up","MLL5",55904.0,"0002446 // neutrophil mediated immunity // inferred from sequence or structural similarity /// 0002446 // neutrophil mediated immunity // inferred from electronic annotation /// 0006306 // DNA methylation // inferred from sequence or structural similarity /// 0006306 // DNA methylation // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0030218 // erythrocyte differentiation // inferred from sequence or structural similarity /// 0030218 // erythrocyte differentiation // inferred from electronic annotation /// 0030854 // positive regulation of granulocyte differentiation // inferred from mutant phenotype /// 0032259 // methylation // inferred from electronic annotation /// 0034968 // histone lysine methylation // inferred from electronic annotation /// 0042119 // neutrophil activation // inferred from sequence or structural similarity /// 0042119 // neutrophil activation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0048384 // retinoic acid receptor signaling pathway // inferred from mutant phenotype /// 0051568 // histone H3-K4 methylation // inferred from direct assay /// 0071300 // cellular response to retinoic acid // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation /// 0070688 // MLL5-L complex // inferred from direct assay","0003713 // transcription coactivator activity // inferred from mutant phenotype /// 0004308 // exo-alpha-sialidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0018024 // histone-lysine N-methyltransferase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0042800 // histone methyltransferase activity (H3-K4 specific) // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0052794 // exo-alpha-(2->3)-sialidase activity // inferred from electronic annotation /// 0052795 // exo-alpha-(2->6)-sialidase activity // inferred from electronic annotation /// 0052796 // exo-alpha-(2->8)-sialidase activity // inferred from electronic annotation","chr7:104654630-104754808 (+) // 99.4 // q22.3"]
["11736973_a_at",0.10415506,-0.15150714,0.0053088665,-0.08246088,-0.0053088665,0.21738625,0.86981153,0.6496143,-1.0404588,-0.057219837,1.0404588,"down","TBX5",6910.0,"0002009 // morphogenesis of an epithelium // inferred from electronic annotation /// 0003166 // bundle of His development // inferred from electronic annotation /// 0003181 // atrioventricular valve morphogenesis // inferred from electronic annotation /// 0003197 // endocardial cushion development // inferred from electronic annotation /// 0003218 // cardiac left ventricle formation // inferred from sequence or structural similarity /// 0003218 // cardiac left ventricle formation // inferred from electronic annotation /// 0003229 // ventricular cardiac muscle tissue development // inferred from electronic annotation /// 0003281 // ventricular septum development // inferred from sequence or structural similarity /// 0003281 // ventricular septum development // inferred from electronic annotation /// 0003283 // atrial septum development // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006917 // induction of apoptosis // inferred from direct assay /// 0007267 // cell-cell signaling // inferred from direct assay /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007389 // pattern specification process // inferred from electronic annotation /// 0007507 // heart development // inferred from direct assay /// 0007507 // heart development // inferred from mutant phenotype /// 0007507 // heart development // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0010467 // gene expression // traceable author statement /// 0010719 // negative regulation of epithelial to mesenchymal transition // traceable author statement /// 0030324 // lung development // inferred from electronic annotation /// 0030326 // embryonic limb morphogenesis // inferred from mutant phenotype /// 0030326 // embryonic limb morphogenesis // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // inferred from direct assay /// 0035115 // embryonic forelimb morphogenesis // inferred from electronic annotation /// 0035117 // embryonic arm morphogenesis // inferred from mutant phenotype /// 0035136 // forelimb morphogenesis // inferred from mutant phenotype /// 0035136 // forelimb morphogenesis // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0051891 // positive regulation of cardioblast differentiation // inferred from direct assay /// 0055007 // cardiac muscle cell differentiation // inferred from electronic annotation /// 0060039 // pericardium development // inferred from direct assay /// 0060044 // negative regulation of cardiac muscle cell proliferation // inferred from direct assay /// 0060045 // positive regulation of cardiac muscle cell proliferation // inferred from electronic annotation /// 0060980 // cell migration involved in coronary vasculogenesis // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement","0000977 // RNA polymerase II regulatory region sequence-specific DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from mutant phenotype /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from direct assay","chr12:114791735-114846519 (-) // 93.28 // q24.21"]
["11727085_s_at",0.027437925,0.13457489,-0.027437925,-0.149791,0.10594225,-0.19701624,0.6719965,0.30097604,1.0906186,0.12514667,1.0906186,"up","GJB2",2706.0,"0006810 // transport // traceable author statement /// 0007154 // cell communication // inferred from electronic annotation /// 0007267 // cell-cell signaling // inferred from electronic annotation /// 0007267 // cell-cell signaling // traceable author statement /// 0007605 // sensory perception of sound // inferred from electronic annotation /// 0007605 // sensory perception of sound // traceable author statement /// 0016044 // cellular membrane organization // traceable author statement /// 0016264 // gap junction assembly // traceable author statement /// 0030539 // male genitalia development // inferred from electronic annotation","0005793 // endoplasmic reticulum-Golgi intermediate compartment // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005921 // gap junction // inferred from electronic annotation /// 0005922 // connexon complex // inferred from electronic annotation /// 0005922 // connexon complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016328 // lateral plasma membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","0005243 // gap junction channel activity // inferred from electronic annotation","chr13:20761605-20767149 (-) // 98.03 // q12.11"]
["11740935_s_at",0.037525177,0.073963165,0.024703026,-0.06389618,-0.16668129,-0.024703026,0.34270862,0.043647736,1.0946659,0.1304906,1.0946659,"up","BANP",54971.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0034504 // protein localization to nucleus // inferred from electronic annotation /// 0042177 // negative regulation of protein catabolic process // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0002039 // p53 binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation","chr16:87985037-88110923 (+) // 96.6 // q24.2"]
["11732667_x_at",-0.008133411,0.20640779,0.090078115,0.008133411,-0.103667736,-0.18170404,0.43497235,0.085444614,1.1396022,0.1885303,1.1396022,"up","RSPH10B /// RSPH10B2","222967 /// 728194","0016310 // phosphorylation // inferred from electronic annotation","","0016301 // kinase activity // inferred from electronic annotation","chr7:6793739-6838392 (+) // 93.15 // p22.1 /// chr7:5965780-6010314 (-) // 93.15 // p22.1"]
["11743979_a_at",0.01439476,0.01121521,-0.0062150955,-0.026248932,-0.06042862,0.006216049,0.56116253,0.17606704,1.02334,0.033285536,1.02334,"up","UQCRC1",7384.0,"0006119 // oxidative phosphorylation // traceable author statement /// 0006122 // mitochondrial electron transport, ubiquinol to cytochrome c // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0009060 // aerobic respiration // traceable author statement /// 0014823 // response to activity // inferred from electronic annotation /// 0022900 // electron transport chain // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0043279 // response to alkaloid // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // traceable author statement","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005746 // mitochondrial respiratory chain // traceable author statement /// 0005750 // mitochondrial respiratory chain complex III // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0070469 // respiratory chain // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0008121 // ubiquinol-cytochrome-c reductase activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0032403 // protein complex binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:48636434-48647664 (-) // 44.59 // p21.31"]
["11748388_a_at",-0.020596027,-0.04653597,0.15342379,0.05030155,0.020596027,-0.056144714,0.91406447,0.75162625,1.0166664,0.02384638,1.0166664,"up","GLYR1",84656.0,"0006098 // pentose-phosphate shunt // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0004616 // phosphogluconate dehydrogenase (decarboxylating) activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016616 // oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0035064 // methylated histone residue binding // inferred from direct assay /// 0050662 // coenzyme binding // inferred from electronic annotation","chr16:4854921-4897283 (-) // 93.58 // p13.3"]
["11731960_a_at",-0.02278781,0.022787571,0.07677364,-0.07575011,-0.11207485,0.0415287,0.6274984,0.24457383,1.0528914,0.0743566,1.0528914,"up","LOC401052",401052.0,"","","","chr3:10047955-10052779 (-) // 67.42 // p25.3"]
["11719594_at",0.032627106,0.005821228,-0.08797455,-0.024820328,-0.005821228,0.012830734,0.93147534,0.7953872,-1.0073547,-0.010571812,1.0073547,"down","GMEB2",26205.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr20:62218957-62251229 (-) // 93.19 // q13.33"]
["11759284_at",-0.007376194,-0.11899233,-0.018013954,0.07531452,0.06638098,0.007376194,0.42150635,0.07773273,-1.0701537,-0.09781803,1.0701537,"down","HIST2H2AB",317772.0,"0006334 // nucleosome assembly // inferred from electronic annotation","0000786 // nucleosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation","chr1:149859018-149859563 (-) // 100.0 // q21.2"]
["11719843_a_at",0.07487583,-0.026067734,-0.10428238,-0.041388035,0.12586975,0.026067734,0.78805727,0.47959894,-1.0391048,-0.05534119,1.0391048,"down","ABI3BP",25890.0,"0010811 // positive regulation of cell-substrate adhesion // inferred from electronic annotation /// 0030198 // extracellular matrix organization // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005614 // interstitial matrix // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from electronic annotation","0005518 // collagen binding // inferred from electronic annotation /// 0005539 // glycosaminoglycan binding // inferred from electronic annotation /// 0008201 // heparin binding // inferred from electronic annotation","chr3:100468001-100712359 (-) // 98.29 // q12.2"]
["11723942_s_at",-0.040955544,-0.00504303,0.022785187,-0.011362076,0.033197403,0.00504303,0.7982456,0.5005999,-1.0116409,-0.01669728,1.0116409,"down","PTTG1IP",754.0,"0006606 // protein import into nucleus // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr21:46269513-46293745 (-) // 97.01 // q22.3"]
["11733305_a_at",0.030282974,0.023365498,-0.15652299,-0.052570343,-0.023365498,0.08675122,0.86415464,0.6374048,-1.026616,-0.03789662,1.026616,"down","TFAP2B",7021.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001822 // kidney development // inferred from sequence or structural similarity /// 0001822 // kidney development // inferred from electronic annotation /// 0003091 // renal water homeostasis // inferred from sequence or structural similarity /// 0003091 // renal water homeostasis // inferred from electronic annotation /// 0006006 // glucose metabolic process // inferred from mutant phenotype /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from direct assay /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0007423 // sensory organ development // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0010842 // retina layer formation // inferred from expression pattern /// 0010960 // magnesium ion homeostasis // inferred from sequence or structural similarity /// 0010960 // magnesium ion homeostasis // inferred from electronic annotation /// 0030510 // regulation of BMP signaling pathway // inferred from sequence or structural similarity /// 0030510 // regulation of BMP signaling pathway // inferred from electronic annotation /// 0035136 // forelimb morphogenesis // inferred from sequence or structural similarity /// 0035136 // forelimb morphogenesis // inferred from electronic annotation /// 0035137 // hindlimb morphogenesis // inferred from sequence or structural similarity /// 0035137 // hindlimb morphogenesis // inferred from electronic annotation /// 0035810 // positive regulation of urine volume // inferred from sequence or structural similarity /// 0035810 // positive regulation of urine volume // inferred from electronic annotation /// 0035909 // aorta morphogenesis // inferred from sequence or structural similarity /// 0035909 // aorta morphogenesis // inferred from electronic annotation /// 0042593 // glucose homeostasis // inferred from sequence or structural similarity /// 0042593 // glucose homeostasis // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from sequence or structural similarity /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from sequence or structural similarity /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from electronic annotation /// 0043525 // positive regulation of neuron apoptotic process // inferred from direct assay /// 0043588 // skin development // inferred from electronic annotation /// 0045444 // fat cell differentiation // inferred from expression pattern /// 0045444 // fat cell differentiation // inferred from electronic annotation /// 0045595 // regulation of cell differentiation // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048485 // sympathetic nervous system development // inferred from sequence or structural similarity /// 0048485 // sympathetic nervous system development // inferred from electronic annotation /// 0050796 // regulation of insulin secretion // inferred from mutant phenotype /// 0055062 // phosphate ion homeostasis // inferred from sequence or structural similarity /// 0055062 // phosphate ion homeostasis // inferred from electronic annotation /// 0055074 // calcium ion homeostasis // inferred from sequence or structural similarity /// 0055074 // calcium ion homeostasis // inferred from electronic annotation /// 0055075 // potassium ion homeostasis // inferred from sequence or structural similarity /// 0055075 // potassium ion homeostasis // inferred from electronic annotation /// 0055078 // sodium ion homeostasis // inferred from sequence or structural similarity /// 0055078 // sodium ion homeostasis // inferred from electronic annotation /// 0072017 // distal tubule development // inferred from sequence or structural similarity /// 0072017 // distal tubule development // inferred from electronic annotation /// 0072044 // collecting duct development // inferred from sequence or structural similarity /// 0072044 // collecting duct development // inferred from electronic annotation /// 0072210 // metanephric nephron development // inferred from electronic annotation /// 0097070 // ductus arteriosus closure // inferred from sequence or structural similarity /// 0097070 // ductus arteriosus closure // inferred from electronic annotation /// 0097275 // cellular ammonia homeostasis // inferred from sequence or structural similarity /// 0097276 // cellular creatinine homeostasis // inferred from sequence or structural similarity /// 0097277 // cellular urea homeostasis // inferred from sequence or structural similarity","0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0000979 // RNA polymerase II core promoter sequence-specific DNA binding // inferred from direct assay /// 0000979 // RNA polymerase II core promoter sequence-specific DNA binding // inferred from electronic annotation /// 0000981 // sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from direct assay /// 0000983 // RNA polymerase II core promoter sequence-specific DNA binding transcription factor activity // inferred from sequence or structural similarity /// 0000983 // RNA polymerase II core promoter sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from electronic annotation /// 0001105 // RNA polymerase II transcription coactivator activity // inferred from sequence or structural similarity /// 0001105 // RNA polymerase II transcription coactivator activity // inferred from electronic annotation /// 0001106 // RNA polymerase II transcription corepressor activity // inferred from sequence or structural similarity /// 0001106 // RNA polymerase II transcription corepressor activity // inferred from electronic annotation /// 0001158 // enhancer sequence-specific DNA binding // inferred from direct assay /// 0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from electronic annotation /// 0003714 // transcription corepressor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0043027 // cysteine-type endopeptidase inhibitor activity involved in apoptotic process // inferred from sequence or structural similarity /// 0043027 // cysteine-type endopeptidase inhibitor activity involved in apoptotic process // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from physical interaction /// 0046983 // protein dimerization activity // inferred from direct assay","chr6:50786377-50815340 (+) // 99.08 // p12.3"]
["11732087_a_at",0.02697277,0.005895138,-0.005895138,-0.12033892,0.18275213,-0.11960983,0.9315913,0.79565996,1.0196376,0.028056458,1.0196376,"up","TRIM6",117854.0,"0070206 // protein trimerization // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:5617342-5665623 (+) // 91.01 // p15.4"]
["11762581_a_at",0.15711784,-0.19649005,0.20020723,0.023365736,-0.023365736,-0.2486937,0.75068647,0.41752422,1.0992424,0.13650963,1.0992424,"up","NEK10",152110.0,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation","","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:27152394-27244048 (-) // 86.65 // p24.1"]
["11745157_a_at",0.095490456,-0.0027549267,-0.17718744,-0.024403572,0.0027546883,0.013644218,0.9209821,0.76750284,-1.01782,-0.025482446,1.01782,"down","HELT",391723.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001967 // suckling behavior // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007417 // central nervous system development // inferred from electronic annotation /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0010259 // multicellular organismal aging // inferred from electronic annotation /// 0010467 // gene expression // inferred from electronic annotation /// 0021858 // GABAergic neuron differentiation in basal ganglia // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0035264 // multicellular organism growth // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation","chr4:185939994-185941958 (+) // 100.0 // q35.1"]
["11759778_at",0.017987728,-0.015947342,0.05768013,0.015947342,-0.07322168,-0.051554203,0.5614107,0.17635041,1.0397114,0.056183062,1.0397114,"up","ASXL1",171023.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0032526 // response to retinoic acid // inferred from sequence or structural similarity /// 0035359 // negative regulation of peroxisome proliferator activated receptor signaling pathway // inferred from sequence or structural similarity /// 0035522 // monoubiquitinated histone H2A deubiquitination // inferred from direct assay /// 0045599 // negative regulation of fat cell differentiation // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0048386 // positive regulation of retinoic acid receptor signaling pathway // inferred from sequence or structural similarity /// 0048387 // negative regulation of retinoic acid receptor signaling pathway // inferred from sequence or structural similarity","0000790 // nuclear chromatin // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0035517 // PR-DUB complex // inferred from direct assay","0003713 // transcription coactivator activity // inferred from sequence or structural similarity /// 0003714 // transcription corepressor activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0042974 // retinoic acid receptor binding // inferred from sequence or structural similarity /// 0042975 // peroxisome proliferator activated receptor binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation","chr20:30946140-30960354 (+) // 72.69 // q11.21"]
["11732409_a_at",-0.078430176,-0.041802406,-0.003993988,0.003993988,0.12949944,0.033319473,0.44140932,0.089961894,-1.0695568,-0.097013146,1.0695568,"down","KTN1",3895.0,"0007018 // microtubule-based movement // inferred from electronic annotation /// 0007018 // microtubule-based movement // non-traceable author statement /// 0015031 // protein transport // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030176 // integral to endoplasmic reticulum membrane // inferred from electronic annotation","0019894 // kinesin binding // inferred from electronic annotation","chr14:56046924-56151297 (+) // 98.33 // q22.3"]
["11728998_x_at",0.07160187,0.04802847,7.658005E-4,-0.05430746,-0.2104559,-7.658005E-4,0.49717808,0.12416618,1.093264,0.1286418,1.093264,"up","GCNT2",2651.0,"0006024 // glycosaminoglycan biosynthetic process // traceable author statement /// 0006486 // protein glycosylation // inferred from electronic annotation /// 0007275 // multicellular organismal development // traceable author statement","0000139 // Golgi membrane // inferred from electronic annotation /// 0005624 // membrane fraction // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008109 // N-acetyllactosaminide beta-1,6-N-acetylglucosaminyltransferase activity // inferred from electronic annotation /// 0008109 // N-acetyllactosaminide beta-1,6-N-acetylglucosaminyltransferase activity // traceable author statement /// 0008375 // acetylglucosaminyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation","chr6:10555948-10629600 (+) // 86.28 // p24.3"]
["11763444_a_at",0.03883457,-0.0024881363,-0.10954189,0.052344322,0.0024881363,-0.03924942,0.8460031,0.59654397,-1.020724,-0.029592901,1.020724,"down","SNAPC4",6621.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006383 // transcription from RNA polymerase III promoter // traceable author statement /// 0009301 // snRNA transcription // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0042795 // snRNA transcription from RNA polymerase II promoter // inferred from direct assay /// 0042796 // snRNA transcription from RNA polymerase III promoter // inferred from direct assay","0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0019185 // snRNA-activating protein complex // inferred from direct assay","0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement","chr9:139270030-139271863 (-) // 98.11 // q34.3"]
["11739125_x_at",0.10760021,0.029276848,0.053858757,-0.05253029,-0.029276848,-0.04779339,0.20838223,0.0115634315,1.0768212,0.106778726,1.0768212,"up","CPNE1",8904.0,"0006629 // lipid metabolic process // traceable author statement /// 0016192 // vesicle-mediated transport // traceable author statement","","0001786 // phosphatidylserine binding // inferred from direct assay /// 0005215 // transporter activity // traceable author statement /// 0005544 // calcium-dependent phospholipid binding // traceable author statement","chr20:34213967-34252854 (-) // 94.8 // q11.22"]
["11755583_a_at",0.006213188,0.016730785,0.15075159,-0.006213188,-0.06583309,-0.017490864,0.53635865,0.15407214,1.0627073,0.087744296,1.0627073,"up","FAM161A",84140.0,"0007601 // visual perception // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation","0005813 // centrosome // inferred from direct assay","","chr2:62051988-62081188 (-) // 88.07 // p15"]
["11725660_a_at",0.0145635605,-0.005473137,0.005473137,0.044927597,-0.071032524,-0.06546211,0.7438748,0.40682322,1.0248245,0.03537687,1.0248245,"up","DPP8",54878.0,"0006508 // proteolysis // non-traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0006955 // immune response // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0004177 // aminopeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0008239 // dipeptidyl-peptidase activity // non-traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation","chr15:65737477-65810051 (-) // 98.54 // q22.31"]
["11745856_x_at",0.047634125,0.054260254,0.062330246,-0.068408966,-0.06979942,-0.047634125,0.054926757,1.5085815E-4,1.0842437,0.116689,1.0842437,"up","RNF145",153830.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr5:158584418-158636581 (-) // 97.67 // q33.3"]
["11719459_at",0.011707306,0.0010786057,0.03409195,-0.09873676,-0.10855198,-0.0010786057,0.41731805,0.07549553,1.0607479,0.08508177,1.0607479,"up","EXOC5",10640.0,"0006810 // transport // inferred from electronic annotation /// 0006887 // exocytosis // inferred from electronic annotation /// 0006892 // post-Golgi vesicle-mediated transport // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0048278 // vesicle docking // inferred from electronic annotation","0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation","0047485 // protein N-terminus binding // inferred from electronic annotation","chr14:57668879-57735726 (-) // 90.51 // q22.3"]
["11758646_s_at",0.0039100647,-0.0039567947,-0.061881065,-0.0039100647,0.08636665,0.024045944,0.55659294,0.17201519,-1.0396827,-0.056143362,1.0396827,"down","MICU1",10367.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0006952 // defense response // traceable author statement /// 0051561 // elevation of mitochondrial calcium ion concentration // inferred from mutant phenotype /// 0070509 // calcium ion import // inferred from direct assay","0005622 // intracellular // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from direct assay /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr10:74127097-74127421 (-) // 100.0 // q22.1"]
["11732718_at",-0.0029587746,-0.046302795,0.0029582977,0.17597723,0.10913992,-0.007874489,0.49922112,0.12605093,-1.07762,-0.10784857,1.07762,"down","EREG",2069.0,"0001525 // angiogenesis // inferred from electronic annotation /// 0001550 // ovarian cumulus expansion // inferred from sequence or structural similarity /// 0001550 // ovarian cumulus expansion // inferred from electronic annotation /// 0001556 // oocyte maturation // inferred from sequence or structural similarity /// 0001556 // oocyte maturation // inferred from electronic annotation /// 0001819 // positive regulation of cytokine production // inferred from sequence or structural similarity /// 0001819 // positive regulation of cytokine production // inferred from electronic annotation /// 0007143 // female meiosis // inferred from sequence or structural similarity /// 0007143 // female meiosis // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // inferred from sequence or structural similarity /// 0007173 // epidermal growth factor receptor signaling pathway // inferred from electronic annotation /// 0007267 // cell-cell signaling // inferred from direct assay /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from sequence or structural similarity /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from sequence or structural similarity /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0009299 // mRNA transcription // inferred from direct assay /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0009887 // organ morphogenesis // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // inferred from direct assay /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030216 // keratinocyte differentiation // traceable author statement /// 0030728 // ovulation // inferred from sequence or structural similarity /// 0030728 // ovulation // inferred from electronic annotation /// 0042060 // wound healing // traceable author statement /// 0042108 // positive regulation of cytokine biosynthetic process // inferred from direct assay /// 0042327 // positive regulation of phosphorylation // inferred from direct assay /// 0042327 // positive regulation of phosphorylation // inferred from sequence or structural similarity /// 0042327 // positive regulation of phosphorylation // inferred from electronic annotation /// 0042700 // luteinizing hormone signaling pathway // inferred from sequence or structural similarity /// 0042700 // luteinizing hormone signaling pathway // inferred from electronic annotation /// 0043434 // response to peptide hormone stimulus // inferred from electronic annotation /// 0043616 // keratinocyte proliferation // inferred from direct assay /// 0045089 // positive regulation of innate immune response // inferred from sequence or structural similarity /// 0045089 // positive regulation of innate immune response // inferred from electronic annotation /// 0045410 // positive regulation of interleukin-6 biosynthetic process // inferred from sequence or structural similarity /// 0045410 // positive regulation of interleukin-6 biosynthetic process // inferred from electronic annotation /// 0045740 // positive regulation of DNA replication // inferred from direct assay /// 0045740 // positive regulation of DNA replication // inferred from sequence or structural similarity /// 0045740 // positive regulation of DNA replication // inferred from electronic annotation /// 0045741 // positive regulation of epidermal growth factor-activated receptor activity // inferred from sequence or structural similarity /// 0045741 // positive regulation of epidermal growth factor-activated receptor activity // inferred from electronic annotation /// 0045840 // positive regulation of mitosis // inferred from sequence or structural similarity /// 0045840 // positive regulation of mitosis // inferred from electronic annotation /// 0045860 // positive regulation of protein kinase activity // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0048146 // positive regulation of fibroblast proliferation // inferred from direct assay /// 0048160 // primary follicle stage // inferred from sequence or structural similarity /// 0048160 // primary follicle stage // inferred from electronic annotation /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from sequence or structural similarity /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from electronic annotation /// 0050680 // negative regulation of epithelial cell proliferation // traceable author statement /// 0051151 // negative regulation of smooth muscle cell differentiation // inferred from direct assay /// 0051781 // positive regulation of cell division // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005154 // epidermal growth factor receptor binding // inferred from sequence or structural similarity /// 0005154 // epidermal growth factor receptor binding // traceable author statement /// 0005154 // epidermal growth factor receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // inferred from electronic annotation","chr4:75230859-75254477 (+) // 83.41 // q13.3"]
["11742697_a_at",-0.05927515,0.0016212463,-0.0013854504,0.0013856888,-0.10549402,0.16751432,0.8673295,0.6442417,-1.0286949,-0.04081511,1.0286949,"down","ITM2A",9452.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chrX:78615880-78623093 (-) // 95.54 // q21.1"]
["11719367_a_at",-0.17143393,-0.012300491,0.28033972,0.0128932,0.012300491,-0.07210302,0.9096544,0.74147135,1.0337148,0.047838163,1.0337148,"up","PLEKHO2",80301.0,"","","0005543 // phospholipid binding // inferred from electronic annotation","chr15:65134081-65160201 (+) // 98.17 // q22.31"]
["11721163_a_at",0.0090584755,-0.010602951,-0.009058952,0.058564186,-0.07652283,0.03820467,0.94054395,0.82079333,-1.0071532,-0.010283085,1.0071532,"down","KHNYN",23351.0,"","","","chr14:24898790-24910548 (+) // 89.48 // q12"]
["11756259_s_at",-0.08383584,0.0012993813,-0.10946298,0.10470533,-0.0012991428,0.026839495,0.42587554,0.080277905,-1.0772963,-0.10741504,1.0772963,"down","NFATC1",4772.0,"0000082 // G1/S transition of mitotic cell cycle // inferred from electronic annotation /// 0001837 // epithelial to mesenchymal transition // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0000790 // nuclear chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement","0000980 // RNA polymerase II distal enhancer sequence-specific DNA binding // inferred from sequence or structural similarity /// 0001085 // RNA polymerase II transcription factor binding // inferred from sequence or structural similarity /// 0001205 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from sequence or structural similarity /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0005528 // FK506 binding // traceable author statement /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0048273 // mitogen-activated protein kinase p38 binding // inferred from sequence or structural similarity","chr18:77253324-77289322 (+) // 93.7 // q23"]
["11760727_at",0.017513275,-0.3323877,-0.13826966,0.5162344,0.029607058,-0.017513275,0.5595325,0.17444165,-1.2545391,-0.32715747,1.2545391,"down","FUCA2",2519.0,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006004 // fucose metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004560 // alpha-L-fucosidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity, acting on glycosyl bonds // inferred from electronic annotation /// 0043169 // cation binding // inferred from electronic annotation","chr6:143817762-143832799 (-) // 77.67 // q24.2"]
["11747203_x_at",0.022368431,0.008348465,-0.03319645,-0.008348465,-0.026260376,0.022813797,0.96556616,0.8945684,1.0021547,0.003105242,1.0021547,"up","CLN3",1201.0,"0000046 // autophagic vacuole fusion // inferred from sequence or structural similarity /// 0001508 // regulation of action potential // inferred from sequence or structural similarity /// 0001575 // globoside metabolic process // inferred from mutant phenotype /// 0006457 // protein folding // traceable author statement /// 0006520 // cellular amino acid metabolic process // inferred from sequence or structural similarity /// 0006672 // ceramide metabolic process // inferred from direct assay /// 0006678 // glucosylceramide metabolic process // inferred from mutant phenotype /// 0006681 // galactosylceramide metabolic process // inferred from mutant phenotype /// 0006684 // sphingomyelin metabolic process // inferred from mutant phenotype /// 0006810 // transport // inferred from electronic annotation /// 0006898 // receptor-mediated endocytosis // inferred from mutant phenotype /// 0007034 // vacuolar transport // not recorded /// 0007040 // lysosome organization // inferred from sequence or structural similarity /// 0007042 // lysosomal lumen acidification // inferred from mutant phenotype /// 0008219 // cell death // inferred from electronic annotation /// 0008306 // associative learning // inferred from sequence or structural similarity /// 0010468 // regulation of gene expression // inferred from mutant phenotype /// 0015809 // arginine transport // inferred from direct assay /// 0016044 // cellular membrane organization // inferred from sequence or structural similarity /// 0016236 // macroautophagy // non-traceable author statement /// 0016242 // negative regulation of macroautophagy // inferred from sequence or structural similarity /// 0016485 // protein processing // inferred from sequence or structural similarity /// 0030163 // protein catabolic process // non-traceable author statement /// 0035235 // ionotropic glutamate receptor signaling pathway // inferred from sequence or structural similarity /// 0035752 // lysosomal lumen pH elevation // inferred from direct assay /// 0042133 // neurotransmitter metabolic process // inferred from sequence or structural similarity /// 0042987 // amyloid precursor protein catabolic process // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043086 // negative regulation of catalytic activity // inferred from sequence or structural similarity /// 0043524 // negative regulation of neuron apoptotic process // inferred from sequence or structural similarity /// 0045861 // negative regulation of proteolysis // inferred from sequence or structural similarity /// 0047496 // vesicle transport along microtubule // inferred from mutant phenotype /// 0050885 // neuromuscular process controlling balance // inferred from sequence or structural similarity /// 0051480 // cytosolic calcium ion homeostasis // inferred from sequence or structural similarity","0000139 // Golgi membrane // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // traceable author statement /// 0005764 // lysosome // inferred from direct assay /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0005770 // late endosome // inferred from direct assay /// 0005770 // late endosome // inferred from sequence or structural similarity /// 0005770 // late endosome // inferred from electronic annotation /// 0005776 // autophagic vacuole // inferred from sequence or structural similarity /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005795 // Golgi stack // inferred from direct assay /// 0005802 // trans-Golgi network // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005901 // caveola // inferred from direct assay /// 0008021 // synaptic vesicle // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030176 // integral to endoplasmic reticulum membrane // inferred from direct assay /// 0043005 // neuron projection // inferred from direct assay /// 0045121 // membrane raft // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0051082 // unfolded protein binding // traceable author statement","chr16:28488600-28503363 (-) // 94.27 // p11.2"]
["11741866_at",0.050573826,-0.02133751,0.02133751,-0.18621302,-0.09704447,0.19191885,0.8935987,0.7043494,1.0333322,0.047304172,1.0333322,"up","OR1J2",26740.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr9:125237967-125276376 (+) // 82.81 // q33.2"]
["11759504_at",6.570816E-4,0.047956944,0.1545105,-0.01653862,-0.048441887,-6.570816E-4,0.50803363,0.13307194,1.0640658,0.08958738,1.0640658,"up","MAP7D3",79649.0,"","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation","","chrX:135298972-135333738 (-) // 91.41 // q26.3"]
["11754168_a_at",0.0,0.0,0.03182888,-0.04021883,0.043073177,-0.030005455,0.8116869,0.52538216,1.0137205,0.01965995,1.0137205,"up","SVEP1",79987.0,"0007155 // cell adhesion // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr9:113169574-113171077 (-) // 78.14 // q31.3"]
["11730182_a_at",0.09981489,-0.0123438835,-7.419586E-4,0.05445242,7.419586E-4,-0.043290615,0.8531754,0.6124485,1.0174387,0.024941804,1.0174387,"up","SH3GL2",6456.0,"0002090 // regulation of receptor internalization // inferred from electronic annotation /// 0006892 // post-Golgi vesicle-mediated transport // traceable author statement /// 0006897 // endocytosis // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007417 // central nervous system development // traceable author statement /// 0016044 // cellular membrane organization // traceable author statement /// 0042059 // negative regulation of epidermal growth factor receptor signaling pathway // traceable author statement /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048488 // synaptic vesicle endocytosis // inferred from electronic annotation","0000139 // Golgi membrane // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008289 // lipid binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction","chr9:17578708-17797122 (+) // 97.99 // p22.2"]
["11731735_s_at",-0.020124435,0.020124435,0.118691444,-0.043985844,0.030165195,-0.15205431,0.616018,0.2302195,1.0679585,0.09485555,1.0679585,"up","VCX2",51480.0,"","","","chrX:8432870-8434551 (+) // 96.14 // p22.31 /// chrX:7810302-7812184 (+) // 95.66 // p22.31 /// chrX:8137984-8139308 (-) // 97.83 // p22.31 /// chrX:6451658-6453159 (-) // 97.23 // p22.31"]
["11723206_at",-0.13617086,0.00615263,-0.10269308,0.0054063797,0.00615263,-0.0054063797,0.5170864,0.13858134,-1.0567406,-0.07962134,1.0567406,"down","TCL1A",8115.0,"0007275 // multicellular organismal development // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr14:96176304-96180829 (-) // 98.38 // q32.13"]
["11752591_a_at",0.2350843,-0.042349815,0.19327736,-0.051675797,0.042349815,-0.055794477,0.56278706,0.17790568,1.1098598,0.15037747,1.1098598,"up","CIT /// MIR1178","100302274 /// 11113","0006468 // protein phosphorylation // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from sequence or structural similarity /// 0007067 // mitosis // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0033205 // cell cycle cytokinesis // inferred from mutant phenotype /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0048699 // generation of neurons // inferred from sequence or structural similarity /// 0051301 // cell division // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from sequence or structural similarity /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005083 // small GTPase regulator activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:120125564-120315092 (-) // 97.0 // q24.23"]
["11735463_a_at",0.05614257,-0.08552408,0.024323702,-0.024323702,-0.036899805,0.068054914,0.98393416,0.9452102,-1.0027508,-0.0039630514,1.0027508,"down","NTNG1",22854.0,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007409 // axonogenesis // inferred from sequence or structural similarity /// 0007409 // axonogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031225 // anchored to membrane // inferred from electronic annotation /// 0046658 // anchored to plasma membrane // inferred from sequence or structural similarity /// 0046658 // anchored to plasma membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr1:107682628-108024476 (+) // 95.09 // p13.3"]
["11751342_a_at",0.13145828,0.19342518,0.1661005,-0.13145828,-0.20479107,-0.24462128,0.08459432,6.9027E-4,1.2810128,0.35728484,1.2810128,"up","NDRG1",10397.0,"0010038 // response to metal ion // traceable author statement /// 0030330 // DNA damage response, signal transduction by p53 class mediator // inferred from expression pattern /// 0032287 // peripheral nervous system myelin maintenance // inferred from electronic annotation /// 0045576 // mast cell activation // inferred from electronic annotation /// 0071456 // cellular response to hypoxia // inferred from expression pattern /// 0090232 // positive regulation of spindle checkpoint // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0005874 // microtubule // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005913 // cell-cell adherens junction // inferred from direct assay /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0055038 // recycling endosome membrane // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // inferred from direct assay /// 0017137 // Rab GTPase binding // inferred from direct assay /// 0043015 // gamma-tubulin binding // inferred from direct assay /// 0045296 // cadherin binding // inferred from direct assay","chr8:134250940-134309495 (-) // 99.93 // q24.22"]
["11747398_a_at",0.0378623,-0.07675743,-0.06900787,0.082256794,0.08469963,-0.0378623,0.60917073,0.22293943,-1.0562849,-0.07899901,1.0562849,"down","PLAT",5327.0,"0001666 // response to hypoxia // inferred from electronic annotation /// 0006464 // cellular protein modification process // traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0006508 // proteolysis // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0014909 // smooth muscle cell migration // inferred from electronic annotation /// 0031639 // plasminogen activation // inferred from direct assay /// 0035249 // synaptic transmission, glutamatergic // inferred from electronic annotation /// 0042730 // fibrinolysis // traceable author statement /// 0043434 // response to peptide hormone stimulus // inferred from electronic annotation /// 0045861 // negative regulation of proteolysis // inferred from direct assay /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from electronic annotation /// 0048167 // regulation of synaptic plasticity // inferred from electronic annotation /// 0048514 // blood vessel morphogenesis // inferred from electronic annotation /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation /// 0051591 // response to cAMP // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0030141 // secretory granule // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from direct assay /// 0045177 // apical part of cell // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from direct assay /// 0004252 // serine-type endopeptidase activity // traceable author statement /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr8:42033078-42065083 (-) // 99.75 // p11.21"]
["11734753_at",-0.06907654,-0.061772346,-0.011366844,0.011367321,0.042119026,0.011668205,0.29602033,0.029347891,-1.0490791,-0.0691234,1.0490791,"down","TATDN3",128387.0,"0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation","0004518 // nuclease activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016888 // endodeoxyribonuclease activity, producing 5'-phosphomonoesters // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:212965169-212990553 (+) // 70.18 // q32.3"]
["11736108_at",-0.013120174,0.013120174,-0.021615505,-0.15242863,0.1350584,0.07543945,0.9254924,0.77835643,-1.0185816,-0.026561601,1.0185816,"down","ARL8A",127829.0,"0006184 // GTP catabolic process // non-traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007059 // chromosome segregation // inferred from sequence or structural similarity /// 0007059 // chromosome segregation // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030496 // midbody // inferred from direct assay /// 0031902 // late endosome membrane // inferred from electronic annotation /// 0051233 // spindle midzone // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // non-traceable author statement /// 0005525 // GTP binding // inferred from direct assay /// 0005525 // GTP binding // inferred from electronic annotation /// 0043014 // alpha-tubulin binding // inferred from sequence or structural similarity /// 0048487 // beta-tubulin binding // inferred from sequence or structural similarity","chr1:202101976-202113871 (-) // 98.38 // q32.1"]
["11742057_a_at",-0.20821118,-3.0565262E-4,3.0565262E-4,0.018898964,0.017304897,-0.050691366,0.7574801,0.42690516,-1.0457765,-0.06457454,1.0457765,"down","CNTN1",1272.0,"0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // non-traceable author statement /// 0007219 // Notch signaling pathway // traceable author statement /// 0007219 // Notch signaling pathway // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0090072 // positive regulation of sodium ion transport via voltage-gated sodium channel activity // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031225 // anchored to membrane // inferred from electronic annotation","0001948 // glycoprotein binding // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr12:41086357-41464094 (+) // 99.85 // q12"]
["11750831_a_at",0.04763174,-0.15200329,-0.15824366,0.026073456,-0.019593239,0.019593239,0.62050086,0.23614082,-1.068976,-0.09622952,1.068976,"down","ZNF571",51276.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:38055470-38085662 (-) // 99.85 // q13.12"]
["11718623_a_at",-0.016105652,-0.14926314,0.016105652,0.14975476,0.18745136,-0.052574158,0.56953865,0.18366694,-1.1054484,-0.14463164,1.1054484,"down","PLA2G1B",5319.0,"0000187 // activation of MAPK activity // inferred from sequence or structural similarity /// 0002446 // neutrophil mediated immunity // inferred from sequence or structural similarity /// 0006633 // fatty acid biosynthetic process // inferred from direct assay /// 0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0006644 // phospholipid metabolic process // inferred from electronic annotation /// 0007015 // actin filament organization // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007243 // intracellular protein kinase cascade // inferred from sequence or structural similarity /// 0010524 // positive regulation of calcium ion transport into cytosol // inferred from sequence or structural similarity /// 0015758 // glucose transport // inferred from sequence or structural similarity /// 0016042 // lipid catabolic process // inferred from electronic annotation /// 0019370 // leukotriene biosynthetic process // inferred from sequence or structural similarity /// 0030593 // neutrophil chemotaxis // inferred from sequence or structural similarity /// 0032431 // activation of phospholipase A2 activity // traceable author statement /// 0032637 // interleukin-8 production // inferred from sequence or structural similarity /// 0032869 // cellular response to insulin stimulus // inferred from sequence or structural similarity /// 0044240 // multicellular organismal lipid catabolic process // inferred from direct assay /// 0045740 // positive regulation of DNA replication // inferred from direct assay /// 0045740 // positive regulation of DNA replication // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0046470 // phosphatidylcholine metabolic process // inferred from direct assay /// 0048146 // positive regulation of fibroblast proliferation // inferred by curator /// 0050482 // arachidonic acid secretion // traceable author statement /// 0050714 // positive regulation of protein secretion // traceable author statement /// 0050778 // positive regulation of immune response // inferred from sequence or structural similarity /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from sequence or structural similarity","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0030141 // secretory granule // inferred from electronic annotation","0004623 // phospholipase A2 activity // inferred from direct assay /// 0004623 // phospholipase A2 activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from direct assay /// 0005102 // receptor binding // inferred from physical interaction /// 0005102 // receptor binding // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from direct assay /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0032052 // bile acid binding // inferred from sequence or structural similarity /// 0043498 // cell surface binding // inferred from direct assay /// 0043498 // cell surface binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047498 // calcium-dependent phospholipase A2 activity // inferred from direct assay /// 0047498 // calcium-dependent phospholipase A2 activity // inferred from electronic annotation","chr12:120759918-120765593 (-) // 90.63 // q24.31"]
["11752943_a_at",0.026710033,0.016174793,-0.053408146,0.1769762,-0.04042244,-0.016174793,0.839058,0.5833572,-1.0307069,-0.04363411,1.0307069,"down","CATSPER2",117155.0,"0001539 // ciliary or flagellar motility // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0009566 // fertilization // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030317 // sperm motility // inferred from electronic annotation /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0070588 // calcium ion transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0009434 // microtubule-based flagellum // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0019861 // flagellum // inferred from electronic annotation /// 0020017 // flagellar membrane // inferred from electronic annotation /// 0036128 // CatSper complex // inferred from sequence or structural similarity /// 0042995 // cell projection // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005262 // calcium channel activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr15:43922870-43940259 (-) // 100.0 // q15.3"]
["11722335_a_at",-0.010303974,-0.07729101,0.088219166,0.11548853,0.010303974,-0.2383213,0.9175127,0.76014525,1.0264887,0.037717693,1.0264887,"up","FNDC5",252995.0,"0014850 // response to muscle activity // inferred from sequence or structural similarity /// 0090336 // positive regulation of brown fat cell differentiation // inferred from sequence or structural similarity","0005576 // extracellular region // inferred from sequence or structural similarity /// 0005576 // extracellular region // inferred from electronic annotation /// 0005777 // peroxisome // inferred from electronic annotation /// 0005778 // peroxisomal membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005179 // hormone activity // inferred from electronic annotation","chr1:33327869-33336414 (-) // 94.07 // p35.1"]
["11722429_s_at",0.04074955,0.03216076,0.05526495,-0.03216076,-0.048605442,-0.13768291,0.28348684,0.02599275,1.0833815,0.115541406,1.0833815,"up","PPL",5493.0,"0031424 // keratinization // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005856 // cytoskeleton // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030057 // desmosome // inferred from electronic annotation","0005200 // structural constituent of cytoskeleton // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr16:4932408-4987136 (-) // 98.5 // p13.3"]
["11750014_x_at",-8.8500977E-4,0.00664711,0.037020683,-0.042499542,-0.0065317154,8.8500977E-4,0.54596543,0.16220787,1.0212313,0.030309651,1.0212313,"up","MIR5096 /// SSBP1","100616427 /// 6742","0006260 // DNA replication // inferred from electronic annotation /// 0051096 // positive regulation of helicase activity // inferred from direct assay /// 0070584 // mitochondrion morphogenesis // inferred from electronic annotation","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0042645 // mitochondrial nucleoid // inferred from direct assay /// 0042645 // mitochondrial nucleoid // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from direct assay /// 0003697 // single-stranded DNA binding // inferred from electronic annotation","chr7:141438406-141450257 (+) // 83.24 // q34"]
["11738003_s_at",0.039256096,-0.17657948,-0.039256096,-0.06384611,0.18980694,0.05093193,0.6632808,0.29011348,-1.0850971,-0.117824115,1.0850971,"down","SLC35E2 /// SLC35E2B","728661 /// 9906","","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr1:1660748-1677493 (-) // 92.67 // p36.33"]
["11716390_a_at",-0.11677837,-0.043776035,-0.16670227,0.043776035,0.07506418,0.053594112,0.20194703,0.010677743,-1.1223819,-0.16656367,1.1223819,"down","BACE1",23621.0,"0006508 // proteolysis // inferred from direct assay /// 0006508 // proteolysis // inferred from electronic annotation /// 0006509 // membrane protein ectodomain proteolysis // traceable author statement /// 0050435 // beta-amyloid metabolic process // inferred from direct assay","0005624 // membrane fraction // inferred from electronic annotation /// 0005768 // endosome // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from direct assay /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0005887 // integral to plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0004175 // endopeptidase activity // inferred from electronic annotation /// 0004190 // aspartic-type endopeptidase activity // inferred from direct assay /// 0004190 // aspartic-type endopeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008798 // beta-aspartyl-peptidase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction","chr11:117156413-117186972 (-) // 98.47 // q23.3"]
["11758059_s_at",-0.058897972,-0.08378315,0.0026445389,0.02336979,-0.0026445389,0.028859138,0.42960596,0.08279905,-1.0447856,-0.06320694,1.0447856,"down","ANKRD49",54851.0,"0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay","0005634 // nucleus // inferred by curator","","chr11:94232287-94232743 (+) // 85.84 // q21"]
["11745521_x_at",-0.11811113,-0.010222912,0.010223389,0.059859753,-0.07210493,0.028054237,0.78392637,0.4719676,-1.0314257,-0.04463992,1.0314257,"down","ABI1",10006.0,"0001756 // somitogenesis // inferred from electronic annotation /// 0006928 // cellular component movement // inferred from direct assay /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // traceable author statement /// 0008154 // actin polymerization or depolymerization // non-traceable author statement /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0009987 // cellular process // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0061098 // positive regulation of protein tyrosine kinase activity // inferred from electronic annotation","0005622 // intracellular // inferred from direct assay /// 0005625 // soluble fraction // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from direct assay /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030175 // filopodium // inferred from direct assay /// 0030175 // filopodium // inferred from electronic annotation /// 0030426 // growth cone // inferred from electronic annotation /// 0031252 // cell leading edge // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008092 // cytoskeletal protein binding // traceable author statement /// 0030296 // protein tyrosine kinase activator activity // inferred from electronic annotation","chr10:27037498-27149792 (-) // 100.0 // p12.1"]
["11734954_at",-0.00399971,0.013680935,0.0066649914,-0.12522268,-0.061459064,0.00399971,0.53507906,0.15290013,1.047059,0.066342816,1.047059,"up","KCNJ13",3769.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006813 // potassium ion transport // non-traceable author statement /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation","0008076 // voltage-gated potassium channel complex // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005242 // inward rectifier potassium channel activity // non-traceable author statement /// 0005242 // inward rectifier potassium channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation","chr2:233630576-233641275 (-) // 97.77 // q37.1"]
["11757532_s_at",-0.024819374,-0.06747913,-0.06452465,0.07458496,0.024819374,0.1982665,0.35325834,0.04692232,-1.1107222,-0.151498,1.1107222,"down","RBM47",54502.0,"","0005634 // nucleus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation","chr4:40425557-40426399 (-) // 85.54 // p14"]
["11739118_a_at",-0.00865221,0.036545753,0.0442791,-0.013790131,-0.069288254,0.00865221,0.5448598,0.16092642,1.0344517,0.048866317,1.0344517,"up","CNPY3",10695.0,"0045087 // innate immune response // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // traceable author statement","0005102 // receptor binding // inferred from electronic annotation","chr6:42896859-42907343 (+) // 98.01 // p21.1"]
["11753291_a_at",-0.038168907,0.014578819,0.0077400208,0.028066635,-0.13376427,-0.0077400208,0.830808,0.5640579,1.0228037,0.032529235,1.0228037,"up","CD44",960.0,"0007155 // cell adhesion // inferred from electronic annotation /// 0007160 // cell-matrix adhesion // non-traceable author statement /// 0016337 // cell-cell adhesion // non-traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0030214 // hyaluronan catabolic process // inferred from direct assay /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from direct assay /// 0034116 // positive regulation of heterotypic cell-cell adhesion // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from mutant phenotype /// 0043518 // negative regulation of DNA damage response, signal transduction by p53 class mediator // inferred from direct assay /// 0044344 // cellular response to fibroblast growth factor stimulus // inferred from direct assay /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0051216 // cartilage development // inferred from expression pattern /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from direct assay /// 0070487 // monocyte aggregation // inferred from mutant phenotype /// 1900625 // positive regulation of monocyte aggregation // inferred from mutant phenotype","0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004415 // hyalurononglucosaminidase activity // inferred from direct assay /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005518 // collagen binding // non-traceable author statement /// 0005540 // hyaluronic acid binding // inferred from direct assay /// 0005540 // hyaluronic acid binding // inferred from electronic annotation /// 0005540 // hyaluronic acid binding // non-traceable author statement","chr11:35160850-35250880 (+) // 100.0 // p13"]
["11750739_a_at",-0.00983429,-1.335144E-5,0.031757355,1.335144E-5,0.0052337646,-0.041992188,0.7220225,0.37318015,1.0136443,0.019551536,1.0136443,"up","ANKRD32",84250.0,"","0005634 // nucleus // inferred from electronic annotation /// 0005813 // centrosome // inferred from electronic annotation","","chr5:94014103-94031571 (+) // 97.39 // q15"]
["11732432_a_at",-0.027698517,-0.04813814,-0.03769207,0.11904526,0.02769804,0.22384596,0.35430902,0.04722993,-1.1183507,-0.16137272,1.1183507,"down","GK",2710.0,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006071 // glycerol metabolic process // inferred from mutant phenotype /// 0006071 // glycerol metabolic process // non-traceable author statement /// 0006071 // glycerol metabolic process // inferred from electronic annotation /// 0006072 // glycerol-3-phosphate metabolic process // inferred from electronic annotation /// 0006641 // triglyceride metabolic process // inferred from mutant phenotype /// 0016310 // phosphorylation // inferred from electronic annotation /// 0019432 // triglyceride biosynthetic process // traceable author statement /// 0019563 // glycerol catabolic process // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046167 // glycerol-3-phosphate biosynthetic process // inferred from mutant phenotype","0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // non-traceable author statement /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004370 // glycerol kinase activity // inferred from mutant phenotype /// 0004370 // glycerol kinase activity // non-traceable author statement /// 0004370 // glycerol kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016773 // phosphotransferase activity, alcohol group as acceptor // inferred from electronic annotation","chrX:30671475-30748908 (+) // 96.57 // p21.2"]
["11735717_a_at",-0.0024662018,-0.05815649,-0.024263382,0.073515415,0.11972046,0.0024662018,0.40321603,0.06840673,-1.0669773,-0.09352943,1.0669773,"down","ZNF226",7769.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:44669907-44681836 (+) // 96.04 // q13.31"]
["11716591_a_at",0.017937183,-0.11037254,0.010548115,0.07483244,-0.04222107,-0.010548592,0.8284049,0.5583139,-1.0243083,-0.034650043,1.0243083,"down","BTBD1",53339.0,"0016567 // protein ubiquitination // inferred from electronic annotation /// 0043393 // regulation of protein binding // non-traceable author statement","0000932 // cytoplasmic mRNA processing body // inferred from direct assay /// 0000932 // cytoplasmic mRNA processing body // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr15:83685174-83736186 (-) // 96.3 // q25.2"]
["11732784_a_at",0.02987814,-0.0032010078,0.031676054,0.0032010078,-0.06986499,-0.080168486,0.4162017,0.07495666,1.0485497,0.068395175,1.0485497,"up","TRIM42",287015.0,"","0005622 // intracellular // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:140396865-140419991 (+) // 99.22 // q23"]
["11715474_at",-0.008646965,-0.004263878,-0.019620895,0.053891182,0.004263878,0.06494808,0.3699579,0.05406981,-1.0366137,-0.05187837,1.0366137,"down","DDX17",10521.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006396 // RNA processing // traceable author statement /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0033148 // positive regulation of intracellular estrogen receptor signaling pathway // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0072358 // cardiovascular system development // inferred from electronic annotation /// 2001014 // regulation of skeletal muscle cell differentiation // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005730 // nucleolus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0003724 // RNA helicase activity // traceable author statement /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0008186 // RNA-dependent ATPase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0030331 // estrogen receptor binding // inferred from direct assay","chr22:38879442-38902345 (-) // 87.68 // q13.1"]
["11727944_a_at",-0.023405075,-0.014493465,0.04866886,0.014493465,-0.07183552,0.09157562,0.96356654,0.8885036,-1.0054358,-0.007820999,1.0054358,"down","ARHGAP8 /// PRR5-ARHGAP8","23779 /// 553158","0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0032321 // positive regulation of Rho GTPase activity // inferred from direct assay /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005100 // Rho GTPase activator activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction","chr22:45098112-45258664 (+) // 92.33 // q13.31"]
["11752271_a_at",-0.17198229,8.1014633E-4,-0.17198229,-8.1014633E-4,0.08369875,0.21649599,0.39907488,0.06649599,-1.1600441,-0.21417962,1.1600441,"down","CMKLR1",1240.0,"0001501 // skeletal system development // traceable author statement /// 0006935 // chemotaxis // inferred from direct assay /// 0006935 // chemotaxis // traceable author statement /// 0006955 // immune response // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from direct assay /// 0007186 // G-protein coupled receptor signaling pathway // non-traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0010759 // positive regulation of macrophage chemotaxis // inferred from mutant phenotype /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0032695 // negative regulation of interleukin-12 production // inferred from sequence or structural similarity /// 0032695 // negative regulation of interleukin-12 production // inferred from electronic annotation /// 0050848 // regulation of calcium-mediated signaling // inferred from direct assay /// 0070098 // chemokine-mediated signaling pathway // traceable author statement","0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // non-traceable author statement /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004950 // chemokine receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr12:108684669-108733076 (-) // 97.27 // q23.3"]
["11759885_at",0.04582262,-0.05882454,-0.04582262,0.12147784,-0.3374617,0.099653244,0.97026736,0.90637803,1.0133754,0.019168714,1.0133754,"up","RIMS1",22999.0,"0006461 // protein complex assembly // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006836 // neurotransmitter transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006887 // exocytosis // inferred from electronic annotation /// 0006944 // cellular membrane fusion // non-traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007269 // neurotransmitter secretion // traceable author statement /// 0007601 // visual perception // inferred from electronic annotation /// 0014047 // glutamate secretion // traceable author statement /// 0016079 // synaptic vesicle exocytosis // traceable author statement /// 0017156 // calcium ion-dependent exocytosis // traceable author statement /// 0045055 // regulated secretory pathway // non-traceable author statement /// 0046903 // secretion // non-traceable author statement /// 0048169 // regulation of long-term neuronal synaptic plasticity // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0042734 // presynaptic membrane // inferred from sequence or structural similarity /// 0042734 // presynaptic membrane // non-traceable author statement /// 0042734 // presynaptic membrane // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0005083 // small GTPase regulator activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0017137 // Rab GTPase binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:72596405-72973703 (+) // 85.56 // q13"]
["11744530_a_at",0.02487135,0.0884459,-0.0644474,-0.06377649,0.25651145,-0.02487111,0.90822977,0.7371405,-1.0278748,-0.039664585,1.0278748,"down","SEMA4G",57715.0,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation","chr10:102729279-102745372 (+) // 98.43 // q24.31"]
["11756190_a_at",-0.0064468384,-0.11115646,0.15455055,0.026559353,0.0064468384,-0.17644787,0.8385317,0.58260864,1.0425594,0.060129564,1.0425594,"up","CLK3",1198.0,"0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0043484 // regulation of RNA splicing // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from electronic annotation","0001669 // acrosomal vesicle // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from sequence or structural similarity /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004712 // protein serine/threonine/tyrosine kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr15:74914142-74922459 (+) // 93.1 // q24.1"]
["11726280_a_at",0.012028217,-0.012028694,0.014729023,0.09501457,-0.2150135,-0.014728546,0.8538644,0.6137721,1.0351348,0.049818642,1.0351348,"up","BCR",613.0,"0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0032855 // positive regulation of Rac GTPase activity // inferred from electronic annotation /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0042472 // inner ear morphogenesis // inferred from electronic annotation /// 0043314 // negative regulation of neutrophil degranulation // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // traceable author statement /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0050728 // negative regulation of inflammatory response // inferred from electronic annotation /// 0050766 // positive regulation of phagocytosis // inferred from electronic annotation /// 0050885 // neuromuscular process controlling balance // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement /// 0051726 // regulation of cell cycle // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005096 // GTPase activator activity // traceable author statement /// 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0030675 // Rac GTPase activator activity // inferred from electronic annotation","chr22:23522551-23660221 (+) // 95.85 // q11.23"]
["11747667_x_at",-0.0060343742,-0.014745712,-0.04814291,0.0060343742,0.033620358,0.065935135,0.3699579,0.054117065,-1.041145,-0.05817096,1.041145,"down","C16orf58",64755.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr16:31504775-31519705 (-) // 99.81 // p11.2"]
["11750067_a_at",-0.086000204,-0.1768508,0.004475832,0.044289112,0.12538409,-0.004475832,0.44817826,0.09418269,-1.102815,-0.14119084,1.102815,"down","SPIB",6689.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0030225 // macrophage differentiation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr19:50922197-50931844 (+) // 98.37 // q13.33"]
["11738513_at",0.13490319,0.047742844,-0.09339142,-0.0017457008,-0.073013306,0.0017454624,0.79210657,0.487656,1.0382036,0.05408939,1.0382036,"up","GADL1",339896.0,"0019752 // carboxylic acid metabolic process // inferred from electronic annotation","","0003824 // catalytic activity // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0016831 // carboxy-lyase activity // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation","chr3:30767691-30936153 (-) // 90.49 // p24.1"]
["11762945_at",-0.037380695,0.10288048,0.0035281181,-0.0035281181,-0.06558943,0.040819645,0.8313812,0.5653213,1.0227418,0.032441963,1.0227418,"up","LOC100133106",1.00133106E8,"","","","chr5:169372500-169373461 (-) // 84.19 // q35.1"]
["11736153_s_at",0.0069875717,-0.0069875717,0.087798595,-0.2773099,-0.085133076,0.0305686,0.6001834,0.21297733,1.1018219,0.13989104,1.1018219,"up","XPR1",9213.0,"0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0009615 // response to virus // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // traceable author statement /// 0004930 // G-protein coupled receptor activity // traceable author statement","chr1:180601147-180859387 (+) // 95.29 // q25.3"]
["11735688_a_at",0.0,0.0,0.18611431,-0.07852459,0.0440588,-0.09291077,0.62297046,0.23981746,1.0751195,0.104497015,1.0751195,"up","C21orf59",56683.0,"","0005634 // nucleus // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay","","chr21:33973968-33985332 (-) // 95.39 // q22.11"]
["11756310_a_at",-0.027414799,0.025553226,0.08990288,-0.025553703,-0.045868397,0.24865818,0.9272071,0.7827997,-1.0208222,-0.029731562,1.0208222,"down","NXT2",55916.0,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0051028 // mRNA transport // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","","chrX:108780109-108786231 (+) // 97.06 // q23"]
["11732506_x_at",0.08786726,-0.009448051,0.009448051,-0.054936886,-0.08692217,0.050377846,0.6757105,0.30672026,1.0423088,0.05978277,1.0423088,"up","TP73-AS1",57212.0,"","0005576 // extracellular region // inferred from electronic annotation","","chr1:3652549-3663886 (-) // 95.13 // p36.32"]
["11761529_x_at",0.13665485,0.0209198,0.039271355,-0.071204185,-0.0209198,-0.029325962,0.36870474,0.053476848,1.0763137,0.10609867,1.0763137,"up","MUC1",4582.0,"0006916 // anti-apoptosis // inferred from direct assay /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // inferred from direct assay /// 0006978 // DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator // inferred from direct assay /// 0010944 // negative regulation of transcription by competitive promoter binding // inferred from direct assay /// 0016266 // O-glycan processing // traceable author statement /// 0036003 // positive regulation of transcription from RNA polymerase II promoter in response to stress // inferred from direct assay /// 0043618 // regulation of transcription from RNA polymerase II promoter in response to stress // inferred from direct assay /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0090240 // positive regulation of histone H4 acetylation // inferred from direct assay","0000790 // nuclear chromatin // inferred from direct assay /// 0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // not recorded /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005796 // Golgi lumen // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0009986 // cell surface // not recorded /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // not recorded /// 0016324 // apical plasma membrane // inferred from electronic annotation","0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0002039 // p53 binding // inferred from physical interaction /// 0003712 // transcription cofactor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction","chr1:155158423-155162684 (-) // 95.76 // q22"]
["11730386_at",0.10436487,-0.11549759,-0.008879185,0.008879423,-0.03909135,0.21126604,0.8176443,0.5377803,-1.0475521,-0.06702201,1.0475521,"down","GREM2",64388.0,"0030509 // BMP signaling pathway // traceable author statement","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation","0005125 // cytokine activity // inferred from electronic annotation","chr1:240652874-240775624 (-) // 96.38 // q43"]
["11745247_at",-0.12708855,0.05063057,-0.084321976,0.02221489,-0.012471676,0.012472153,0.6902693,0.32602885,-1.0431875,-0.060998484,1.0431875,"down","C5orf65",389333.0,"","","","chr5:138727634-138729130 (-) // 99.93 // q31.2"]
["11753162_a_at",-0.022949219,-0.012763977,-0.016018867,0.065709114,0.09136486,0.012763977,0.31343502,0.034020975,-1.0525266,-0.07385668,1.0525266,"down","YIPF5",81555.0,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030134 // ER to Golgi transport vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation /// 0042175 // nuclear outer membrane-endoplasmic reticulum membrane network // inferred from electronic annotation","","chr5:143537730-143550194 (-) // 87.41 // q31.3"]
["11751928_x_at",0.02698946,-0.070335865,0.118938446,0.0059986115,-0.026055336,-0.0059986115,0.834888,0.574124,1.0237635,0.03388253,1.0237635,"up","EIF4G3",8672.0,"0001934 // positive regulation of protein phosphorylation // inferred from electronic annotation /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006446 // regulation of translational initiation // traceable author statement /// 0007128 // meiotic prophase I // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0016070 // RNA metabolic process // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045727 // positive regulation of translation // inferred from electronic annotation","0005829 // cytosol // traceable author statement /// 0016281 // eukaryotic translation initiation factor 4F complex // traceable author statement","0000339 // RNA cap binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0008135 // translation factor activity, nucleic acid binding // traceable author statement","chr1:21133157-21377395 (-) // 99.62 // p36.12"]
["11764202_at",0.0040769577,-0.0040769577,-0.21616244,0.18212986,-0.050094843,0.13815594,0.57089484,0.18490186,-1.1189284,-0.16211776,1.1189284,"down","","","","","","chr4:39822231-39822835 (-) // 67.22 // p14"]
["11748831_x_at",0.08321929,-0.25047135,-0.048675537,-0.03441906,0.3089223,0.03441906,0.6614549,0.2879495,-1.1289252,-0.1749499,1.1289252,"down","RFPL2",10739.0,"","","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr22:32586425-32589181 (-) // 77.38 // q12.3"]
["11748021_x_at",-0.034443855,-0.05405426,0.011955261,0.022239685,-0.011955261,0.01713562,0.5810631,0.19485229,-1.0243113,-0.034654237,1.0243113,"down","SUMF2",25870.0,"","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // inferred from electronic annotation","0042803 // protein homodimerization activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:56131957-56147525 (+) // 99.8 // p11.2"]
["11756954_s_at",-0.041805744,-0.25670004,-0.010020733,0.010020733,0.2540617,0.2224741,0.4110286,0.07181249,-1.2016591,-0.26502764,1.2016591,"down","ZEB2",9839.0,"0001755 // neural crest cell migration // inferred from electronic annotation /// 0001756 // somitogenesis // inferred from electronic annotation /// 0001843 // neural tube closure // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007399 // nervous system development // non-traceable author statement /// 0007417 // central nervous system development // inferred from electronic annotation /// 0021766 // hippocampus development // inferred from electronic annotation /// 0021846 // cell proliferation in forebrain // inferred from electronic annotation /// 0030177 // positive regulation of Wnt receptor signaling pathway // inferred from electronic annotation /// 0043507 // positive regulation of JUN kinase activity // inferred from electronic annotation /// 0048598 // embryonic morphogenesis // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0019208 // phosphatase regulator activity // non-traceable author statement /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046332 // SMAD binding // non-traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:145145584-145277669 (-) // 96.21 // q22.3"]
["11740685_s_at",-0.079808235,-0.041680813,-0.0946002,0.041680813,0.133286,0.1785326,0.21000811,0.01176564,-1.1406553,-0.18986285,1.1406553,"down","NAPEPLD",222236.0,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0009395 // phospholipid catabolic process // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation","0004620 // phospholipase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070290 // NAPE-specific phospholipase D activity // inferred from electronic annotation","chr7:102740022-102789679 (-) // 88.33 // q22.1"]
["11735980_at",-0.0025761127,-0.19562888,-0.059954166,0.09122801,0.10215545,0.0025758743,0.42828557,0.08145339,-1.1106259,-0.1513729,1.1106259,"down","OR5M11",219487.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr11:56309737-56310757 (-) // 99.61 // q12.1"]
["11752463_x_at",-0.10534048,0.033230305,0.056233883,-0.033230305,0.06398916,-0.13186264,0.9031984,0.7267826,1.0198869,0.028409105,1.0198869,"up","ANKLE1",126549.0,"","0005635 // nuclear envelope // inferred from electronic annotation","","chr19:17392727-17397731 (+) // 92.9 // p13.11"]
["11763106_x_at",0.07800388,0.04275465,-0.023292065,-0.032342672,-0.15477943,0.023292065,0.60897547,0.22273396,1.0622319,0.087098755,1.0622319,"up","TTTY6B",441543.0,"","","","chrY:24291168-24292831 (+) // 76.23 // q11.223 /// chrY:24585886-24587549 (-) // 76.23 // q11.223"]
["11735887_at",0.037364006,0.025411129,-0.03354025,-0.02380085,0.02380085,-0.029665947,0.80766463,0.5174809,1.013702,0.019633653,1.013702,"up","NEK11",79858.0,"0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007243 // intracellular protein kinase cascade // inferred from direct assay /// 0016310 // phosphorylation // inferred from electronic annotation /// 0031572 // G2/M transition DNA damage checkpoint // inferred from mutant phenotype /// 0031573 // intra-S DNA damage checkpoint // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:130745693-130893982 (+) // 96.07 // q22.1"]
["11760220_at",0.12118387,0.017433643,-0.21405792,-0.26436806,0.17169094,-0.017433643,0.984167,0.94605154,1.0080427,0.011556742,1.0080427,"up","NUTF2",10204.0,"0006611 // protein export from nucleus // inferred from direct assay /// 0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005643 // nuclear pore // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0015630 // microtubule cytoskeleton // inferred from direct assay","0005215 // transporter activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr16:67880825-67906470 (+) // 94.98 // q22.1"]
["11742113_a_at",-0.010723114,0.010723114,-0.21980047,0.14941692,-0.026637077,0.079372406,0.5773052,0.19149022,-1.1024023,-0.14065084,1.1024023,"down","ABL2",27.0,"0006464 // cellular protein modification process // traceable author statement /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0010506 // regulation of autophagy // traceable author statement /// 0010976 // positive regulation of neuron projection development // inferred from mutant phenotype /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0030100 // regulation of endocytosis // traceable author statement /// 0030155 // regulation of cell adhesion // traceable author statement /// 0051353 // positive regulation of oxidoreductase activity // inferred from direct assay /// 0071300 // cellular response to retinoic acid // inferred from mutant phenotype /// 2000145 // regulation of cell motility // traceable author statement /// 2000249 // regulation of actin cytoskeleton reorganization // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from direct assay /// 0003785 // actin monomer binding // traceable author statement /// 0004672 // protein kinase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004715 // non-membrane spanning protein tyrosine kinase activity // traceable author statement /// 0004715 // non-membrane spanning protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0030145 // manganese ion binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051015 // actin filament binding // traceable author statement","chr1:179081443-179198819 (-) // 86.03 // q25.2"]
["11721583_x_at",0.054920197,0.14601994,-0.054920197,0.13162756,-0.15060616,-0.12015486,0.75488657,0.42314604,1.0681033,0.0950512,1.0681033,"up","LRMP",4033.0,"0006903 // vesicle targeting // traceable author statement /// 0006906 // vesicle fusion // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","","chr12:25205240-25261269 (+) // 98.05 // p12.1"]
["11729021_a_at",0.051666737,0.0067226887,-0.0067226887,-0.025429249,-0.041045427,0.02539301,0.67950255,0.31164032,1.0216607,0.030916126,1.0216607,"up","CNTN4",152330.0,"0007155 // cell adhesion // inferred from electronic annotation /// 0007158 // neuron cell-cell adhesion // traceable author statement /// 0007399 // nervous system development // inferred from mutant phenotype /// 0007409 // axonogenesis // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007413 // axonal fasciculation // traceable author statement /// 0007420 // brain development // inferred from sequence or structural similarity /// 0007420 // brain development // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from sequence or structural similarity /// 0031175 // neuron projection development // inferred from electronic annotation /// 0045665 // negative regulation of neuron differentiation // inferred from mutant phenotype /// 0048167 // regulation of synaptic plasticity // traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005886 // plasma membrane // non-traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030424 // axon // non-traceable author statement /// 0031225 // anchored to membrane // inferred from electronic annotation","","chr3:2140609-3099644 (+) // 97.83 // p26.3"]
["11729546_at",-0.006380081,-0.023596764,-0.0048441887,0.0048441887,0.07428932,0.07319641,0.38099095,0.058334764,-1.0441896,-0.062383655,1.0441896,"down","ZFPM1",161882.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0002295 // T-helper cell lineage commitment // inferred by curator /// 0003151 // outflow tract morphogenesis // inferred from sequence or structural similarity /// 0003151 // outflow tract morphogenesis // inferred from electronic annotation /// 0003181 // atrioventricular valve morphogenesis // inferred from sequence or structural similarity /// 0003181 // atrioventricular valve morphogenesis // inferred from electronic annotation /// 0003192 // mitral valve formation // inferred from sequence or structural similarity /// 0003192 // mitral valve formation // inferred from electronic annotation /// 0003195 // tricuspid valve formation // inferred from sequence or structural similarity /// 0003195 // tricuspid valve formation // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0010724 // regulation of definitive erythrocyte differentiation // inferred from direct assay /// 0010724 // regulation of definitive erythrocyte differentiation // inferred from mutant phenotype /// 0030218 // erythrocyte differentiation // inferred from sequence or structural similarity /// 0030218 // erythrocyte differentiation // inferred from electronic annotation /// 0030219 // megakaryocyte differentiation // inferred from sequence or structural similarity /// 0030219 // megakaryocyte differentiation // inferred from electronic annotation /// 0030220 // platelet formation // inferred from genetic interaction /// 0030851 // granulocyte differentiation // inferred from electronic annotation /// 0032091 // negative regulation of protein binding // inferred from sequence or structural similarity /// 0032091 // negative regulation of protein binding // inferred from electronic annotation /// 0032642 // regulation of chemokine production // inferred from electronic annotation /// 0035162 // embryonic hemopoiesis // inferred from sequence or structural similarity /// 0035162 // embryonic hemopoiesis // inferred from electronic annotation /// 0035855 // megakaryocyte development // inferred from electronic annotation /// 0045078 // positive regulation of interferon-gamma biosynthetic process // inferred from direct assay /// 0045403 // negative regulation of interleukin-4 biosynthetic process // inferred from direct assay /// 0045599 // negative regulation of fat cell differentiation // inferred from sequence or structural similarity /// 0045599 // negative regulation of fat cell differentiation // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048872 // homeostasis of number of cells // inferred from electronic annotation /// 0055008 // cardiac muscle tissue morphogenesis // inferred from sequence or structural similarity /// 0055008 // cardiac muscle tissue morphogenesis // inferred from electronic annotation /// 0060318 // definitive erythrocyte differentiation // inferred from electronic annotation /// 0060319 // primitive erythrocyte differentiation // inferred from electronic annotation /// 0060377 // negative regulation of mast cell differentiation // inferred from sequence or structural similarity /// 0060377 // negative regulation of mast cell differentiation // inferred from electronic annotation /// 0060412 // ventricular septum morphogenesis // inferred from sequence or structural similarity /// 0060412 // ventricular septum morphogenesis // inferred from electronic annotation /// 0060413 // atrial septum morphogenesis // inferred from sequence or structural similarity /// 0060413 // atrial septum morphogenesis // inferred from electronic annotation /// 0071733 // transcriptional activation by promoter-enhancer looping // inferred from sequence or structural similarity /// 0071733 // transcriptional activation by promoter-enhancer looping // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0017053 // transcriptional repressor complex // inferred from direct assay","0001078 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription // inferred from direct assay /// 0001085 // RNA polymerase II transcription factor binding // inferred from physical interaction /// 0001102 // RNA polymerase II activating transcription factor binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:88519724-88601572 (+) // 77.95 // q24.2"]
["11763825_at",-0.03034544,0.030345678,-0.04938507,0.068893194,0.23834276,-0.06286907,0.6998699,0.33982217,-1.0702273,-0.097917184,1.0702273,"down","P2RX6",9127.0,"0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // not recorded /// 0006936 // muscle contraction // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0035590 // purinergic nucleotide receptor signaling pathway // not recorded /// 0035590 // purinergic nucleotide receptor signaling pathway // non-traceable author statement /// 0051260 // protein homooligomerization // inferred from physical interaction /// 0051291 // protein heterooligomerization // inferred from electronic annotation","0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005887 // integral to plasma membrane // traceable author statement /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from direct assay /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from electronic annotation","0001614 // purinergic nucleotide receptor activity // not recorded /// 0001614 // purinergic nucleotide receptor activity // non-traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // traceable author statement /// 0004931 // extracellular ATP-gated cation channel activity // not recorded /// 0004931 // extracellular ATP-gated cation channel activity // non-traceable author statement /// 0004931 // extracellular ATP-gated cation channel activity // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0005524 // ATP binding // non-traceable author statement /// 0015267 // channel activity // traceable author statement /// 0042802 // identical protein binding // inferred from physical interaction","chr22:21369463-21372950 (+) // 48.4 // q11.21"]
["11725583_at",0.0361557,-0.008146286,0.008146286,-0.15046692,0.028140545,-0.1425991,0.5518869,0.16797385,1.0720413,0.100360446,1.0720413,"up","FBXO10",26267.0,"0016567 // protein ubiquitination // non-traceable author statement","0000151 // ubiquitin ligase complex // non-traceable author statement","0004842 // ubiquitin-protein ligase activity // non-traceable author statement","chr9:37510888-37576367 (-) // 89.4 // p13.2"]
["11742851_x_at",-0.27958965,-0.09551716,0.24410486,0.05079174,-0.05079174,0.3059392,0.7875923,0.4784924,-1.1062267,-0.14564705,1.1062267,"down","SPINT2",10653.0,"0006928 // cellular component movement // traceable author statement /// 0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // traceable author statement","0005576 // extracellular region // traceable author statement /// 0005625 // soluble fraction // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0004866 // endopeptidase inhibitor activity // traceable author statement /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0004867 // serine-type endopeptidase inhibitor activity // traceable author statement /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation","chr19:38754687-38783254 (+) // 55.71 // q13.2"]
["11717144_s_at",0.009543419,0.044348717,-0.010029793,-0.022798538,0.006011963,-0.006011963,0.65821743,0.28374174,1.0155212,0.022220314,1.0155212,"up","LANCL1",10314.0,"0007186 // G-protein coupled receptor signaling pathway // inferred from direct assay /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0005887 // integral to plasma membrane // traceable author statement /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0003824 // catalytic activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement /// 0008270 // zinc ion binding // inferred from direct assay /// 0017124 // SH3 domain binding // inferred from physical interaction /// 0043295 // glutathione binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050750 // low-density lipoprotein particle receptor binding // inferred from direct assay","chr2:211295655-211341491 (-) // 91.65 // q34"]
["11741172_a_at",-0.171247,0.047934294,-0.050490856,0.04317403,-0.04317403,0.056535482,0.6989773,0.3383449,-1.0546613,-0.07677972,1.0546613,"down","CASS4",57091.0,"0000160 // two-component signal transduction system (phosphorelay) // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0023014 // signal transduction by phosphorylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","0000155 // two-component sensor activity // inferred from electronic annotation","chr20:54987301-55033947 (+) // 99.27 // q13.2"]
["11737026_at",-0.056900978,0.0342803,-0.0342803,0.11756325,-0.03872013,0.09245491,0.626631,0.24360298,-1.0541399,-0.07606628,1.0541399,"down","IRX4",50805.0,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0007507 // heart development // traceable author statement /// 0048561 // establishment of organ orientation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr5:1877540-1882875 (-) // 92.5 // p15.33"]
["11748985_x_at",0.00888443,-0.038531303,0.047465324,-0.00888443,0.06214714,-0.024950027,0.9777081,0.92832017,-1.0024276,-0.0034980106,1.0024276,"down","VTA1",51534.0,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016044 // cellular membrane organization // traceable author statement /// 0016197 // endosomal transport // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","","chr6:142468397-142540388 (+) // 99.78 // q24.1"]
["11731080_at",0.06471896,0.020345926,-0.0024926662,-0.17088675,0.0024926662,-0.15349317,0.42941988,0.08269252,1.0979557,0.13481985,1.0979557,"up","HCAR1",27198.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0032355 // response to estradiol stimulus // inferred from direct assay","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation","chr12:123212152-123215129 (-) // 84.4 // q24.31"]
["11720010_s_at",0.046483517,0.116888046,-6.799698E-4,6.804466E-4,-0.07407045,-0.036317825,0.43777183,0.08791004,1.0649604,0.090799734,1.0649604,"up","JARID2",3720.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007417 // central nervous system development // traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0031061 // negative regulation of histone methylation // inferred from sequence or structural similarity /// 0031061 // negative regulation of histone methylation // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0048536 // spleen development // inferred from electronic annotation /// 0048538 // thymus development // inferred from electronic annotation /// 0048863 // stem cell differentiation // inferred from sequence or structural similarity /// 0048863 // stem cell differentiation // inferred from electronic annotation /// 0051574 // positive regulation of histone H3-K9 methylation // inferred from sequence or structural similarity /// 0051574 // positive regulation of histone H3-K9 methylation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0035097 // histone methyltransferase complex // inferred from sequence or structural similarity /// 0035097 // histone methyltransferase complex // inferred from electronic annotation /// 0035098 // ESC/E(Z) complex // inferred from direct assay /// 0035098 // ESC/E(Z) complex // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from sequence or structural similarity /// 0003682 // chromatin binding // inferred from electronic annotation /// 0032452 // histone demethylase activity // inferred from sequence or structural similarity","chr6:15246205-15522255 (+) // 95.56 // p22.3"]
["11735929_a_at",0.03136778,-0.079787254,-0.27426982,-0.031368017,0.10532999,0.13880849,0.5433703,0.15932068,-1.1316961,-0.1784866,1.1316961,"down","PRDM7",11105.0,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007128 // meiotic prophase I // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0010520 // regulation of reciprocal meiotic recombination // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0016571 // histone methylation // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation /// 0034968 // histone lysine methylation // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0051568 // histone H3-K4 methylation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0018024 // histone-lysine N-methyltransferase activity // inferred from electronic annotation /// 0042800 // histone methyltransferase activity (H3-K4 specific) // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr16:90122975-90128733 (-) // 74.13 // q24.3"]
["11752305_a_at",0.026623249,0.028747082,0.27754974,-0.026623249,-0.07386351,-0.12849188,0.460378,0.10131205,1.1386304,0.1872995,1.1386304,"up","PARPBP",55010.0,"0006281 // DNA repair // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 2000042 // negative regulation of double-strand break repair via homologous recombination // inferred from mutant phenotype","0000785 // chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr12:102517765-102591139 (+) // 99.87 // q23.2"]
["11727075_at",0.029879093,0.21751595,-0.029879093,-0.15482879,0.15754366,-0.09711599,0.7644214,0.44039154,1.0747286,0.10397239,1.0747286,"up","PLAC4",191585.0,"","0019028 // viral capsid // inferred from electronic annotation","0005198 // structural molecule activity // inferred from electronic annotation","chr21:42547158-42551989 (-) // 27.4 // q22.2"]
["11757167_x_at",0.11797047,0.03570938,0.11927366,-0.035708904,-0.09378338,-0.06797171,0.18315598,0.008351839,1.1148162,0.15680586,1.1148162,"up","HSPA8 /// SNORD14C /// SNORD14D","3312 /// 85389 /// 85390","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006457 // protein folding // non-traceable author statement /// 0006457 // protein folding // inferred from electronic annotation /// 0006892 // post-Golgi vesicle-mediated transport // traceable author statement /// 0006950 // response to stress // inferred from electronic annotation /// 0006986 // response to unfolded protein // non-traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007269 // neurotransmitter secretion // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016044 // cellular membrane organization // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0051085 // chaperone mediated protein folding requiring cofactor // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from electronic annotation /// 0061077 // chaperone-mediated protein folding // inferred from electronic annotation","0005622 // intracellular // non-traceable author statement /// 0005622 // intracellular // inferred from electronic annotation /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0042470 // melanosome // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0061202 // clathrin sculpted gamma-aminobutyric acid transport vesicle membrane // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005102 // receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0042623 // ATPase activity, coupled // non-traceable author statement /// 0042623 // ATPase activity, coupled // inferred from electronic annotation /// 0043531 // ADP binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // inferred from electronic annotation","chr11:122929538-122929766 (-) // 61.84 // q24.1"]
["11719625_a_at",-0.03256607,-0.040895462,-0.0010576248,0.0010576248,0.004553795,0.015658379,0.40394336,0.06864307,-1.0223787,-0.03192966,1.0223787,"down","CDC16",8881.0,"0000075 // cell cycle checkpoint // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0007067 // mitosis // traceable author statement /// 0007088 // regulation of mitosis // traceable author statement /// 0007094 // mitotic cell cycle spindle assembly checkpoint // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0051301 // cell division // inferred from electronic annotation /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0070979 // protein K11-linked ubiquitination // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005680 // anaphase-promoting complex // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005813 // centrosome // traceable author statement /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // traceable author statement /// 0005819 // spindle // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005876 // spindle microtubule // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr13:115000361-115038150 (+) // 96.88 // q34"]
["11745746_a_at",-0.0044751167,-0.00540781,0.039173603,0.0044755936,-0.04641819,0.08579445,0.9721965,0.91193056,-1.00337,-0.0048537753,1.00337,"down","AHCYL1",10768.0,"0006378 // mRNA polyadenylation // inferred from electronic annotation /// 0006611 // protein export from nucleus // inferred from electronic annotation /// 0006730 // one-carbon metabolic process // inferred from electronic annotation /// 0010765 // positive regulation of sodium ion transport // inferred from electronic annotation /// 0031440 // regulation of mRNA 3'-end processing // inferred from electronic annotation /// 0032412 // regulation of ion transmembrane transporter activity // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004013 // adenosylhomocysteinase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr1:110527421-110564996 (+) // 94.17 // p13.3"]
["11718491_x_at",0.060373068,0.094144106,-0.15318823,0.04377222,-0.14193392,-0.04377222,0.86461216,0.6388453,1.0336547,0.04775431,1.0336547,"up","FABP5",2171.0,"0006006 // glucose metabolic process // inferred from electronic annotation /// 0006629 // lipid metabolic process // traceable author statement /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006656 // phosphatidylcholine biosynthetic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0008544 // epidermis development // traceable author statement /// 0015758 // glucose transport // inferred from electronic annotation","0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation /// 0005504 // fatty acid binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008289 // lipid binding // traceable author statement /// 0008289 // lipid binding // inferred from electronic annotation","chr8:82192597-82197012 (+) // 84.01 // q21.13"]
["11756650_a_at",0.084739685,-0.0043287277,0.084355354,-0.09180784,0.0019512177,-0.0019512177,0.48441023,0.115162045,1.0610735,0.08552465,1.0610735,"up","CHP1",11261.0,"0001578 // microtubule bundle formation // inferred from sequence or structural similarity /// 0001933 // negative regulation of protein phosphorylation // inferred from sequence or structural similarity /// 0006469 // negative regulation of protein kinase activity // inferred from sequence or structural similarity /// 0006611 // protein export from nucleus // inferred from sequence or structural similarity /// 0006813 // potassium ion transport // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0010923 // negative regulation of phosphatase activity // inferred from direct assay /// 0017156 // calcium ion-dependent exocytosis // inferred from electronic annotation /// 0022406 // membrane docking // inferred from sequence or structural similarity /// 0031122 // cytoplasmic microtubule organization // inferred from sequence or structural similarity /// 0031397 // negative regulation of protein ubiquitination // inferred from sequence or structural similarity /// 0031953 // negative regulation of protein autophosphorylation // inferred from sequence or structural similarity /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0032417 // positive regulation of sodium:hydrogen antiporter activity // inferred from direct assay /// 0032417 // positive regulation of sodium:hydrogen antiporter activity // inferred from sequence or structural similarity /// 0042308 // negative regulation of protein import into nucleus // inferred from direct assay /// 0045056 // transcytosis // inferred from electronic annotation /// 0050821 // protein stabilization // inferred from sequence or structural similarity /// 0051222 // positive regulation of protein transport // inferred from sequence or structural similarity /// 0051453 // regulation of intracellular pH // inferred from direct assay /// 0060050 // positive regulation of protein glycosylation // inferred from sequence or structural similarity /// 0061024 // membrane organization // inferred from sequence or structural similarity /// 0061025 // membrane fusion // inferred from sequence or structural similarity /// 0070885 // negative regulation of calcineurin-NFAT signaling cascade // inferred from direct assay /// 0071468 // cellular response to acidity // inferred from sequence or structural similarity /// 0090314 // positive regulation of protein targeting to membrane // inferred from sequence or structural similarity","0000139 // Golgi membrane // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0015630 // microtubule cytoskeleton // inferred from sequence or structural similarity /// 0030133 // transport vesicle // inferred from sequence or structural similarity","0005215 // transporter activity // inferred from sequence or structural similarity /// 0005509 // calcium ion binding // inferred from direct assay /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // inferred from sequence or structural similarity /// 0015459 // potassium channel regulator activity // traceable author statement /// 0019900 // kinase binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation /// 0048306 // calcium-dependent protein binding // inferred from direct assay","chr15:41523337-41571917 (+) // 96.98 // q15.1"]
["11725339_at",0.042037964,-0.083943844,-0.18310976,-0.0010061264,0.19065619,0.0010061264,0.58913386,0.20257305,-1.1008037,-0.13855727,1.1008037,"down","NOL12",79159.0,"","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0019843 // rRNA binding // inferred from electronic annotation","chr22:38082329-38089479 (+) // 78.8 // q13.1"]
["11725578_at",0.21357107,-0.0046286583,-0.04889679,0.08491802,0.0046286583,-0.050593376,0.8827549,0.6775503,1.0283734,0.040364143,1.0283734,"up","BEND3",57673.0,"","","","chr6:107386383-107435636 (-) // 98.39 // q21"]
["11724350_s_at",0.002957344,0.0049238205,-0.08452034,-0.075892925,-0.002957344,0.07368374,0.8801877,0.67232305,-1.0166508,-0.02382422,1.0166508,"down","PPP1R14C",81706.0,"0042325 // regulation of phosphorylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0004864 // protein phosphatase inhibitor activity // inferred from electronic annotation /// 0004865 // protein serine/threonine phosphatase inhibitor activity // inferred from electronic annotation","chr6:150463685-150571528 (+) // 94.26 // q25.1"]
["11732609_s_at",-0.111291885,-0.102767944,-0.009206772,0.03831625,0.17423964,0.009206772,0.4073147,0.070187025,-1.1082959,-0.14834313,1.1082959,"down","LOC100653178 /// NBPF3","100653178 /// 84224","","0005737 // cytoplasm // inferred from electronic annotation","","chr1:21766629-21811392 (+) // 83.39 // p36.12"]
["11753223_a_at",0.057432175,-0.16376948,0.12667966,-0.057431936,0.110117435,-0.07884598,0.9642533,0.8908299,1.0108024,0.015500978,1.0108024,"up","ST8SIA2",8128.0,"0001574 // ganglioside biosynthetic process // inferred from direct assay /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0006464 // cellular protein modification process // traceable author statement /// 0006486 // protein glycosylation // inferred from direct assay /// 0006486 // protein glycosylation // inferred from electronic annotation /// 0006491 // N-glycan processing // inferred from direct assay /// 0007399 // nervous system development // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0009311 // oligosaccharide metabolic process // inferred from direct assay /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0000139 // Golgi membrane // traceable author statement /// 0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030173 // integral to Golgi membrane // inferred from electronic annotation","0003828 // alpha-N-acetylneuraminate alpha-2,8-sialyltransferase activity // inferred from direct assay /// 0003828 // alpha-N-acetylneuraminate alpha-2,8-sialyltransferase activity // inferred from electronic annotation /// 0008373 // sialyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0033691 // sialic acid binding // inferred by curator","chr15:92937270-93007615 (+) // 99.91 // q26.1"]
["11754909_a_at",-0.056935787,0.051747322,0.021516562,-0.101430416,-0.021516562,0.058532476,0.8740061,0.6581366,1.0188307,0.026914276,1.0188307,"up","C2orf88",84281.0,"","0005576 // extracellular region // inferred from electronic annotation","","chr2:191045164-191064935 (+) // 95.76 // q32.2"]
["11743064_at",0.014090538,0.010372162,0.01879406,-0.07868862,-0.0982008,-0.010372162,0.34882593,0.045295466,1.0547049,0.0768394,1.0547049,"up","CDC6",990.0,"0000075 // cell cycle checkpoint // traceable author statement /// 0000076 // DNA replication checkpoint // traceable author statement /// 0000079 // regulation of cyclin-dependent protein kinase activity // traceable author statement /// 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000083 // regulation of transcription involved in G1/S phase of mitotic cell cycle // traceable author statement /// 0000084 // S phase of mitotic cell cycle // traceable author statement /// 0000216 // M/G1 transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006260 // DNA replication // traceable author statement /// 0006260 // DNA replication // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0007089 // traversing start control point of mitotic cell cycle // traceable author statement /// 0008156 // negative regulation of DNA replication // traceable author statement /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0051301 // cell division // inferred from electronic annotation /// 0051984 // positive regulation of chromosome segregation // inferred from direct assay /// 0071777 // positive regulation of cell cycle cytokinesis // inferred from mutant phenotype /// 0090007 // regulation of mitotic anaphase // inferred from mutant phenotype","0000922 // spindle pole // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0051233 // spindle midzone // inferred from direct assay","0000166 // nucleotide binding // traceable author statement /// 0000166 // nucleotide binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0019900 // kinase binding // inferred from physical interaction","chr17:38443861-38459413 (+) // 89.9 // q21.2"]
["11721527_a_at",0.04067564,0.06240177,0.15692043,-0.06701231,-0.06637621,-0.04067564,0.2426667,0.01695888,1.105491,0.14468734,1.105491,"up","PROSER1",80209.0,"","","","chr13:39584001-39612252 (-) // 99.58 // q13.3"]
["11763313_at",-0.012413502,0.03552246,0.012413502,0.05477667,-0.14476919,-0.14891577,0.63350487,0.25340194,1.0654603,0.09147687,1.0654603,"up","SEPHS1",22929.0,"0006464 // cellular protein modification process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation","","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004756 // selenide, water dikinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0005524 // ATP binding // traceable author statement /// 0005525 // GTP binding // traceable author statement /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr10:13359427-13379583 (-) // 89.04 // p13"]
["11760518_at",0.3552556,0.005156517,-0.0051562786,-0.085395575,0.14358449,-0.03665042,0.77883685,0.4636083,1.0801556,0.111239165,1.0801556,"up","SEC11C",90701.0,"0006112 // energy reserve metabolic process // traceable author statement /// 0006412 // translation // traceable author statement /// 0006465 // signal peptide processing // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0050796 // regulation of insulin secretion // traceable author statement","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr18:56807097-56824178 (+) // 77.11 // q21.32"]
["11727458_at",-0.04698181,0.0037546158,0.026745796,0.0049095154,-0.0037546158,-0.018888474,0.99578506,0.9863089,1.0002893,4.173415E-4,1.0002893,"up","KIF18A",81930.0,"0000087 // M phase of mitotic cell cycle // traceable author statement /// 0000236 // mitotic prometaphase // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007018 // microtubule-based movement // traceable author statement /// 0007018 // microtubule-based movement // inferred from electronic annotation /// 0007019 // microtubule depolymerization // inferred from direct assay /// 0007080 // mitotic metaphase plate congression // inferred from direct assay /// 0007596 // blood coagulation // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation","0001726 // ruffle // inferred from direct assay /// 0001726 // ruffle // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005828 // kinetochore microtubule // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005901 // caveola // inferred from direct assay /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003777 // microtubule motor activity // inferred from electronic annotation /// 0003779 // actin binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008017 // microtubule binding // inferred from direct assay /// 0008574 // plus-end-directed microtubule motor activity // inferred from direct assay /// 0043130 // ubiquitin binding // inferred from direct assay /// 0051010 // microtubule plus-end binding // inferred from direct assay /// 0070463 // tubulin-dependent ATPase activity // inferred from direct assay","chr11:28042165-28129855 (-) // 98.33 // p14.1"]
["11717689_a_at",-0.046845913,-0.08970976,0.046845913,0.1430912,0.047326088,-0.08871746,0.7776789,0.46149284,-1.0452175,-0.0638032,1.0452175,"down","RNF19A",25897.0,"0000226 // microtubule cytoskeleton organization // traceable author statement /// 0006464 // cellular protein modification process // non-traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // traceable author statement /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008134 // transcription factor binding // traceable author statement /// 0008270 // zinc ion binding // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:101269294-101322394 (-) // 97.68 // q22.2"]
["11747102_a_at",0.048532963,0.043119907,-0.16974783,-0.075917244,0.16059399,-0.043119907,0.8999749,0.71868485,-1.0280311,-0.039883923,1.0280311,"down","SEC1P",653677.0,"0005975 // carbohydrate metabolic process // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation","0008107 // galactoside 2-alpha-L-fucosyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation","chr19:49141355-49185081 (+) // 80.42 // q13.33"]
["11741025_a_at",0.16621733,0.018676758,0.17939568,-0.055488586,-0.059622288,-0.018676281,0.31806433,0.035370532,1.1219634,0.1660256,1.1219634,"up","PIP5K1A",8394.0,"0006650 // glycerophospholipid metabolic process // traceable author statement /// 0006909 // phagocytosis // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0008654 // phospholipid biosynthetic process // inferred from direct assay /// 0010761 // fibroblast migration // inferred from electronic annotation /// 0016310 // phosphorylation // non-traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016477 // cell migration // non-traceable author statement /// 0030216 // keratinocyte differentiation // traceable author statement /// 0031532 // actin cytoskeleton reorganization // inferred from mutant phenotype /// 0032863 // activation of Rac GTPase activity // inferred from mutant phenotype /// 0046488 // phosphatidylinositol metabolic process // inferred from electronic annotation /// 0046854 // phosphatidylinositol phosphorylation // inferred from electronic annotation /// 0048041 // focal adhesion assembly // inferred from mutant phenotype /// 0060326 // cell chemotaxis // inferred from mutant phenotype /// 0072661 // protein targeting to plasma membrane // inferred from mutant phenotype /// 0097178 // ruffle assembly // inferred from mutant phenotype","0001726 // ruffle // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005847 // mRNA cleavage and polyadenylation specificity factor complex // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from direct assay /// 0016607 // nuclear speck // traceable author statement /// 0016607 // nuclear speck // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from direct assay /// 0032587 // ruffle membrane // inferred from direct assay /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016307 // phosphatidylinositol phosphate kinase activity // inferred from electronic annotation /// 0016308 // 1-phosphatidylinositol-4-phosphate 5-kinase activity // inferred from direct assay /// 0016308 // 1-phosphatidylinositol-4-phosphate 5-kinase activity // traceable author statement /// 0016308 // 1-phosphatidylinositol-4-phosphate 5-kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0019900 // kinase binding // inferred from direct assay","chr1:151171019-151222006 (+) // 99.49 // q21.3"]
["11721685_at",-0.102977276,0.04142666,-0.042482615,-0.04142666,0.10574865,0.050657272,0.6634931,0.29035464,-1.0519048,-0.07300414,1.0519048,"down","CCL19",6363.0,"0001768 // establishment of T cell polarity // inferred from direct assay /// 0001771 // immunological synapse formation // inferred from sequence or structural similarity /// 0002407 // dendritic cell chemotaxis // inferred from direct assay /// 0002408 // myeloid dendritic cell chemotaxis // inferred from direct assay /// 0002606 // positive regulation of dendritic cell antigen processing and presentation // inferred from sequence or structural similarity /// 0006874 // cellular calcium ion homeostasis // traceable author statement /// 0006935 // chemotaxis // inferred from electronic annotation /// 0006954 // inflammatory response // non-traceable author statement /// 0006954 // inflammatory response // inferred from electronic annotation /// 0006955 // immune response // inferred from electronic annotation /// 0006955 // immune response // traceable author statement /// 0007154 // cell communication // traceable author statement /// 0007257 // activation of JUN kinase activity // inferred from sequence or structural similarity /// 0009615 // response to virus // traceable author statement /// 0010560 // positive regulation of glycoprotein biosynthetic process // inferred from sequence or structural similarity /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0031295 // T cell costimulation // inferred from sequence or structural similarity /// 0032320 // positive regulation of Ras GTPase activity // inferred from sequence or structural similarity /// 0032735 // positive regulation of interleukin-12 production // inferred from sequence or structural similarity /// 0032760 // positive regulation of tumor necrosis factor production // inferred from sequence or structural similarity /// 0034695 // response to prostaglandin E stimulus // inferred from direct assay /// 0042102 // positive regulation of T cell proliferation // inferred from sequence or structural similarity /// 0042346 // positive regulation of NF-kappaB import into nucleus // inferred from direct assay /// 0043089 // positive regulation of Cdc42 GTPase activity // inferred from sequence or structural similarity /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from direct assay /// 0043552 // positive regulation of phosphatidylinositol 3-kinase activity // inferred from direct assay /// 0045627 // positive regulation of T-helper 1 cell differentiation // inferred from sequence or structural similarity /// 0045807 // positive regulation of endocytosis // inferred from sequence or structural similarity /// 0045860 // positive regulation of protein kinase activity // inferred from direct assay /// 0046330 // positive regulation of JNK cascade // inferred from direct assay /// 0048260 // positive regulation of receptor-mediated endocytosis // inferred from sequence or structural similarity /// 0048469 // cell maturation // inferred from sequence or structural similarity /// 0050718 // positive regulation of interleukin-1 beta secretion // inferred from sequence or structural similarity /// 0050921 // positive regulation of chemotaxis // inferred from sequence or structural similarity /// 0051209 // release of sequestered calcium ion into cytosol // inferred from direct assay /// 0051897 // positive regulation of protein kinase B signaling cascade // inferred from direct assay /// 0060491 // regulation of cell projection assembly // inferred from sequence or structural similarity /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from direct assay /// 0071731 // response to nitric oxide // inferred from direct assay /// 0072610 // interleukin-12 secretion // inferred from sequence or structural similarity /// 0090023 // positive regulation of neutrophil chemotaxis // inferred from direct assay /// 0097029 // mature dendritic cell differentiation // inferred from sequence or structural similarity /// 2000107 // negative regulation of leukocyte apoptotic process // inferred from direct assay /// 2000147 // positive regulation of cell motility // inferred from direct assay /// 2000549 // positive regulation of dendritic cell dendrite assembly // inferred from sequence or structural similarity","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation","0005125 // cytokine activity // inferred from electronic annotation /// 0008009 // chemokine activity // inferred from direct assay /// 0008009 // chemokine activity // inferred from electronic annotation /// 0031732 // CCR7 chemokine receptor binding // inferred from sequence or structural similarity /// 0031735 // CCR10 chemokine receptor binding // inferred from direct assay /// 0048020 // CCR chemokine receptor binding // inferred from physical interaction","chr9:34689559-34691326 (-) // 94.4 // p13.3"]
["11733504_at",0.09396958,0.024575472,-0.0809226,0.09396958,-0.14058757,-0.024575472,0.8878301,0.6904474,1.0254605,0.036271896,1.0254605,"up","GPR182",11318.0,"0001666 // response to hypoxia // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0001605 // adrenomedullin receptor activity // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // traceable author statement /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation","chr12:57388229-57390541 (+) // 100.0 // q13.3"]
["11751371_a_at",-0.053394318,-0.1425457,0.1893115,-0.07454443,0.10237837,0.053394318,0.9359113,0.80715793,-1.0205066,-0.02928554,1.0205066,"down","TP73",7161.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // not recorded /// 0000187 // activation of MAPK activity // inferred from electronic annotation /// 0001822 // kidney development // inferred from electronic annotation /// 0001836 // release of cytochrome c from mitochondria // inferred from electronic annotation /// 0006298 // mismatch repair // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from direct assay /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0006978 // DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator // not recorded /// 0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0008630 // DNA damage response, signal transduction resulting in induction of apoptosis // traceable author statement /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0010165 // response to X-ray // not recorded /// 0010243 // response to organic nitrogen // inferred from electronic annotation /// 0010332 // response to gamma radiation // not recorded /// 0021766 // hippocampus development // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation /// 0031571 // mitotic cell cycle G1/S transition DNA damage checkpoint // not recorded /// 0033326 // cerebrospinal fluid secretion // inferred from electronic annotation /// 0034644 // cellular response to UV // not recorded /// 0042771 // DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis // not recorded /// 0042771 // DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043508 // negative regulation of JUN kinase activity // not recorded /// 0043508 // negative regulation of JUN kinase activity // inferred from electronic annotation /// 0043523 // regulation of neuron apoptotic process // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // not recorded /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0045793 // positive regulation of cell size // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048546 // digestive tract morphogenesis // inferred from electronic annotation /// 0048666 // neuron development // inferred from electronic annotation /// 0048714 // positive regulation of oligodendrocyte differentiation // inferred from electronic annotation /// 0051262 // protein tetramerization // inferred from electronic annotation","0000785 // chromatin // not recorded /// 0000785 // chromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // not recorded /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // not recorded","0002039 // p53 binding // not recorded /// 0002039 // p53 binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // not recorded /// 0003684 // damaged DNA binding // not recorded /// 0003690 // double-stranded DNA binding // not recorded /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:3644041-3649931 (+) // 100.0 // p36.32"]
["11763248_x_at",0.07077217,0.05734539,0.038949013,-0.038949013,-0.046110153,-0.074832916,0.105804704,0.0016031574,1.0784701,0.10898619,1.0784701,"up","EIF4EBP1",1978.0,"0000082 // G1/S transition of mitotic cell cycle // inferred from mutant phenotype /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006417 // regulation of translation // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008286 // insulin receptor signaling pathway // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0017148 // negative regulation of translation // inferred from electronic annotation /// 0031333 // negative regulation of protein complex assembly // inferred from electronic annotation /// 0031929 // TOR signaling cascade // inferred from direct assay /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045931 // positive regulation of mitotic cell cycle // inferred from mutant phenotype /// 0045947 // negative regulation of translational initiation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0043234 // protein complex // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008190 // eukaryotic initiation factor 4E binding // inferred from electronic annotation /// 0031369 // translation initiation factor binding // inferred from electronic annotation","chr8:37888061-37917774 (+) // 97.02 // p11.23"]
["11719801_a_at",-0.039964676,0.009475708,0.03611374,0.031114578,-0.009475708,-0.021677017,0.98502016,0.94840413,1.0013093,0.00188765,1.0013093,"up","C6orf62",81688.0,"","0005622 // intracellular // inferred from direct assay","","chr6:24704281-24721153 (-) // 87.43 // p22.3"]
["11738507_at",-0.05218911,0.014578819,0.095371485,-0.09038305,0.052773,-0.014578819,0.8339324,0.57069373,1.0257293,0.036650036,1.0257293,"up","INSL5",10022.0,"","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation","0005179 // hormone activity // non-traceable author statement /// 0005179 // hormone activity // inferred from electronic annotation","chr1:67263423-67266939 (-) // 98.21 // p31.3"]
["11732394_at",0.08603811,0.011713982,-0.098082066,0.15415907,-0.20168638,-0.011713982,0.9590656,0.8736596,1.0137044,0.019637045,1.0137044,"up","CLDN22 /// WWC2","53842 /// 80014","0016338 // calcium-independent cell-cell adhesion // inferred from sequence or structural similarity /// 0034329 // cell junction assembly // traceable author statement /// 0045216 // cell-cell junction organization // traceable author statement /// 0070830 // tight junction assembly // traceable author statement","0005886 // plasma membrane // inferred from electronic annotation /// 0005923 // tight junction // inferred from sequence or structural similarity /// 0005923 // tight junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","0005198 // structural molecule activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from sequence or structural similarity","chr4:184020445-184241927 (+) // 98.19 // q35.1"]
["11732171_x_at",0.012217522,-0.0122179985,-0.04087019,0.072206974,0.06890488,-0.019135475,0.567043,0.18167016,-1.0383425,-0.054282364,1.0383425,"down","GRSF1",2926.0,"0006378 // mRNA polyadenylation // traceable author statement /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0016331 // morphogenesis of embryonic epithelium // inferred from electronic annotation","0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0003729 // mRNA binding // traceable author statement","chr4:71682122-71705607 (-) // 69.33 // q13.3"]
["11727345_s_at",-0.044001102,0.052922726,0.17103863,-0.0060400963,0.006040573,-0.033854485,0.68800056,0.32310188,1.0506421,0.071271345,1.0506421,"up","FBLN1",2192.0,"0007566 // embryo implantation // inferred from electronic annotation /// 0010952 // positive regulation of peptidase activity // inferred from electronic annotation /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // traceable author statement /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005604 // basement membrane // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // traceable author statement /// 0005625 // soluble fraction // traceable author statement /// 0031012 // extracellular matrix // inferred from direct assay","0005201 // extracellular matrix structural constituent // traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0016504 // peptidase activator activity // inferred from electronic annotation","chr22:45898711-45997073 (+) // 98.35 // q13.31"]
["11754838_a_at",-0.113897085,-0.03543043,0.03543043,-0.07805061,0.11599326,0.1534903,0.6640732,0.29092106,-1.0730941,-0.10177663,1.0730941,"down","DSC3",1825.0,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from electronic annotation /// 0050821 // protein stabilization // inferred from direct assay","0005576 // extracellular region // inferred from electronic annotation /// 0005624 // membrane fraction // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005911 // cell-cell junction // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030057 // desmosome // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation /// 0045295 // gamma-catenin binding // inferred from physical interaction","chr18:28569973-28571896 (-) // 53.33 // q12.1"]
["11736058_s_at",-0.10971546,0.023686409,-0.20013857,0.039827347,0.1392827,-0.023686409,0.52019334,0.14135179,-1.1074159,-0.14719716,1.1074159,"down","C10orf32",119032.0,"","","","chr10:104613966-104624718 (+) // 84.91 // q24.32"]
["11730969_at",-0.072741985,-0.24027824,-0.23069239,0.19912624,0.072741985,0.10894728,0.19304499,0.009547706,-1.2381414,-0.3081761,1.2381414,"down","THAP2",83591.0,"","0005730 // nucleolus // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:72057676-72074427 (+) // 91.12 // q21.1"]
["11730155_a_at",0.09367323,-0.0068933964,0.053647757,-0.041414976,0.0068933964,-0.07280421,0.4435661,0.091250554,1.0589132,0.08258437,1.0589132,"up","SGCD",6444.0,"0007010 // cytoskeleton organization // inferred from electronic annotation /// 0007517 // muscle organ development // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016010 // dystrophin-associated glycoprotein complex // inferred from direct assay /// 0016012 // sarcoglycan complex // inferred from electronic annotation /// 0016012 // sarcoglycan complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0042383 // sarcolemma // inferred from electronic annotation","","chr5:155753766-156185068 (+) // 98.74 // q33.3"]
["11749683_a_at",0.004594803,-0.13576508,0.113898754,-0.0045952797,-0.10687065,0.015343666,0.9191336,0.76343083,1.0183854,0.026283655,1.0183854,"up","COL4A3BP",10087.0,"0000902 // cell morphogenesis // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0003007 // heart morphogenesis // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0006665 // sphingolipid metabolic process // traceable author statement /// 0006672 // ceramide metabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // inferred from electronic annotation /// 0006936 // muscle contraction // inferred from electronic annotation /// 0006955 // immune response // non-traceable author statement /// 0007029 // endoplasmic reticulum organization // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030148 // sphingolipid biosynthetic process // traceable author statement /// 0034976 // response to endoplasmic reticulum stress // inferred from electronic annotation /// 0035621 // ER to Golgi ceramide transport // inferred from genetic interaction /// 0035621 // ER to Golgi ceramide transport // inferred from mutant phenotype /// 0044281 // small molecule metabolic process // traceable author statement /// 0055088 // lipid homeostasis // inferred from electronic annotation /// 0070584 // mitochondrion morphogenesis // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0004672 // protein kinase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0035620 // ceramide transporter activity // inferred from direct assay /// 0070273 // phosphatidylinositol-4-phosphate binding // inferred from direct assay /// 0097001 // ceramide binding // inferred from direct assay","chr5:74674856-74807440 (-) // 92.3 // q13.3"]
["11735598_a_at",-0.024381638,0.10622215,-0.08077526,0.024382114,-0.07346535,0.028265,0.97346723,0.9155509,1.005069,0.007294574,1.005069,"up","FLJ43860",389690.0,"","","","chr8:142443928-142517330 (-) // 99.98 // q24.3"]
["11739619_a_at",0.11310959,-0.065193176,-0.25433588,-0.38306046,0.065193176,0.07579851,0.98565644,0.9517935,1.0082707,0.011883083,1.0082707,"up","PTPN3",5774.0,"0006470 // protein dephosphorylation // inferred from direct assay /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0006470 // protein dephosphorylation // traceable author statement /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from direct assay /// 0035335 // peptidyl-tyrosine dephosphorylation // traceable author statement /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation /// 0045930 // negative regulation of mitotic cell cycle // inferred from direct assay /// 0051045 // negative regulation of membrane protein ectodomain proteolysis // inferred from mutant phenotype","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009898 // internal side of plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation","0001784 // phosphotyrosine binding // inferred from physical interaction /// 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from direct assay /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008092 // cytoskeletal protein binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0051117 // ATPase binding // inferred from physical interaction","chr9:112137977-112191323 (-) // 87.6 // q31.3"]
["11731661_s_at",0.1037364,0.028392792,-0.02026987,-0.39369345,-0.039417267,0.02026987,0.6408437,0.2622406,1.1288862,0.17490008,1.1288862,"up","DBP",1628.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0048511 // rhythmic process // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0000977 // RNA polymerase II regulatory region sequence-specific DNA binding // inferred from direct assay /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation","chr19:49133817-49140639 (-) // 92.95 // q13.33"]
["11763430_at",-0.08702564,0.19949484,-0.04951763,-0.006676197,0.24846935,0.006676197,0.86489195,0.6397146,-1.0437956,-0.061839204,1.0437956,"down","LOC100131822",1.00131822E8,"","","","chr17:35881152-35884427 (-) // 29.56 // q12"]
["11733254_a_at",-0.15568018,-0.18091822,-0.2554407,0.20670033,0.20477962,0.15568066,0.068419255,3.5321206E-4,-1.3071276,-0.38639998,1.3071276,"down","FXYD3",5349.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006821 // chloride transport // traceable author statement /// 0006821 // chloride transport // inferred from electronic annotation /// 0050790 // regulation of catalytic activity // inferred from electronic annotation","0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0034707 // chloride channel complex // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005254 // chloride channel activity // inferred from electronic annotation /// 0005254 // chloride channel activity // traceable author statement /// 0051117 // ATPase binding // inferred from electronic annotation","chr19:35606533-35615226 (+) // 93.17 // q13.12"]
["11721575_at",-0.0011920929,-0.035862923,0.0011920929,0.022129059,-0.022911072,0.043456078,0.6839543,0.31739247,-1.0183115,-0.026178949,1.0183115,"down","C1orf131",128061.0,"","","","chr1:231359508-231377209 (-) // 97.01 // q42.2"]
["11741500_a_at",0.019611835,0.0289011,0.029778957,-0.025330067,-0.056704998,-0.019611835,0.17863429,0.007455589,1.042451,0.059979603,1.042451,"up","DAGLB",221955.0,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0016042 // lipid catabolic process // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004806 // triglyceride lipase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:6448746-6487643 (-) // 99.96 // p22.1"]
["11757092_s_at",0.009095192,-0.008766174,0.068927765,-0.018203735,0.008766174,-0.017925262,0.6461504,0.2693722,1.0225749,0.03220652,1.0225749,"up","LSM3",27258.0,"0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0006397 // mRNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0043928 // exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay // traceable author statement","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay","0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr3:14220333-14239843 (+) // 96.81 // p25.1"]
["11748689_a_at",-0.009473324,0.009473324,0.16904926,-0.12852907,-0.105255604,0.0729661,0.6442204,0.2663009,1.0791953,0.109955914,1.0791953,"up","GNA13",10672.0,"0001525 // angiogenesis // inferred from electronic annotation /// 0001569 // patterning of blood vessels // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0006184 // GTP catabolic process // not recorded /// 0006184 // GTP catabolic process // traceable author statement /// 0006928 // cellular component movement // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007189 // adenylate cyclase-activating G-protein coupled receptor signaling pathway // not recorded /// 0007189 // adenylate cyclase-activating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007243 // intracellular protein kinase cascade // inferred from electronic annotation /// 0007266 // Rho protein signal transduction // not recorded /// 0007266 // Rho protein signal transduction // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0030168 // platelet activation // inferred from electronic annotation /// 0030334 // regulation of cell migration // inferred from electronic annotation /// 0031584 // activation of phospholipase D activity // not recorded","0005834 // heterotrimeric G-protein complex // not recorded /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0031234 // extrinsic to internal side of plasma membrane // not recorded /// 0031526 // brush border membrane // not recorded /// 0042470 // melanosome // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // not recorded /// 0003924 // GTPase activity // traceable author statement /// 0004871 // signal transducer activity // not recorded /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0019001 // guanyl nucleotide binding // inferred from electronic annotation /// 0031683 // G-protein beta/gamma-subunit complex binding // not recorded /// 0031702 // type 1 angiotensin receptor binding // not recorded /// 0031752 // D5 dopamine receptor binding // not recorded /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:63009905-63051892 (-) // 100.0 // q24.1"]
["11748930_a_at",0.0532012,0.032717705,0.15031385,-0.07229042,-0.1595335,-0.032717705,0.30989364,0.032859225,1.1226629,0.1669248,1.1226629,"up","PGAM5 /// PXMP2","192111 /// 5827","","0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005777 // peroxisome // inferred from electronic annotation /// 0005778 // peroxisomal membrane // inferred from direct assay /// 0005778 // peroxisomal membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation","chr12:133264634-133308796 (+) // 89.34 // q24.33"]
["11745960_a_at",-0.09481478,0.0047769547,-0.34912252,0.12188816,0.01634121,-0.0047769547,0.54820514,0.16475564,-1.1414526,-0.19087088,1.1414526,"down","GTPBP5",26164.0,"0006184 // GTP catabolic process // inferred from electronic annotation /// 0042254 // ribosome biogenesis // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation","chr20:60768470-60778622 (+) // 84.98 // q13.33"]
["11745717_x_at",-0.012628555,0.022082329,0.1686821,0.010128975,-0.010128021,-0.016673088,0.67968076,0.3118179,1.0460385,0.06493596,1.0460385,"up","HMGB1",3146.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0000902 // cell morphogenesis // inferred from electronic annotation /// 0001773 // myeloid dendritic cell activation // inferred from sequence or structural similarity /// 0002053 // positive regulation of mesenchymal cell proliferation // inferred from electronic annotation /// 0002407 // dendritic cell chemotaxis // inferred from sequence or structural similarity /// 0002437 // inflammatory response to antigenic stimulus // inferred from expression pattern /// 0006265 // DNA topological change // inferred from sequence or structural similarity /// 0006288 // base-excision repair, DNA ligation // inferred from direct assay /// 0006309 // apoptotic DNA fragmentation // traceable author statement /// 0006310 // DNA recombination // inferred from sequence or structural similarity /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006915 // apoptotic process // traceable author statement /// 0006921 // cellular component disassembly involved in apoptotic process // traceable author statement /// 0006935 // chemotaxis // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007623 // circadian rhythm // inferred from electronic annotation /// 0008156 // negative regulation of DNA replication // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0009408 // response to heat // inferred from electronic annotation /// 0009749 // response to glucose stimulus // inferred from electronic annotation /// 0010942 // positive regulation of cell death // inferred from electronic annotation /// 0010976 // positive regulation of neuron projection development // inferred from electronic annotation /// 0014911 // positive regulation of smooth muscle cell migration // inferred from electronic annotation /// 0017055 // negative regulation of RNA polymerase II transcriptional preinitiation complex assembly // inferred from direct assay /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from sequence or structural similarity /// 0031532 // actin cytoskeleton reorganization // inferred from electronic annotation /// 0032392 // DNA geometric change // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0032868 // response to insulin stimulus // inferred from electronic annotation /// 0033034 // positive regulation of myeloid cell apoptotic process // inferred from electronic annotation /// 0033151 // V(D)J recombination // inferred from direct assay /// 0034341 // response to interferon-gamma // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043280 // positive regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0043388 // positive regulation of DNA binding // inferred from direct assay /// 0045087 // innate immune response // traceable author statement /// 0045663 // positive regulation of myoblast differentiation // inferred from electronic annotation /// 0045931 // positive regulation of mitotic cell cycle // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0050727 // regulation of inflammatory response // inferred from electronic annotation /// 0050831 // male-specific defense response to bacterium // inferred from electronic annotation /// 0050918 // positive chemotaxis // inferred from sequence or structural similarity /// 0050930 // induction of positive chemotaxis // inferred from electronic annotation /// 0051103 // DNA ligation involved in DNA repair // inferred from sequence or structural similarity /// 0051450 // myoblast proliferation // inferred from electronic annotation /// 0071347 // cellular response to interleukin-1 // inferred from electronic annotation","0000793 // condensed chromosome // inferred from direct assay /// 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0017053 // transcriptional repressor complex // inferred from direct assay","0000400 // four-way junction DNA binding // inferred from electronic annotation /// 0000401 // open form four-way junction DNA binding // inferred from electronic annotation /// 0000402 // crossed form four-way junction DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003681 // bent DNA binding // inferred from electronic annotation /// 0003684 // damaged DNA binding // inferred from sequence or structural similarity /// 0003690 // double-stranded DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from sequence or structural similarity /// 0003697 // single-stranded DNA binding // inferred from electronic annotation /// 0003697 // single-stranded DNA binding // inferred from sequence or structural similarity /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0005125 // cytokine activity // inferred from electronic annotation /// 0005125 // cytokine activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0008097 // 5S rRNA binding // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008201 // heparin binding // inferred from electronic annotation /// 0008301 // DNA binding, bending // inferred from electronic annotation /// 0008301 // DNA binding, bending // inferred from mutant phenotype /// 0008301 // DNA binding, bending // inferred from sequence or structural similarity /// 0042056 // chemoattractant activity // inferred from sequence or structural similarity /// 0042277 // peptide binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation /// 0050786 // RAGE receptor binding // inferred from electronic annotation /// 0050786 // RAGE receptor binding // inferred from sequence or structural similarity /// 0051861 // glycolipid binding // inferred from electronic annotation /// 0070491 // repressing transcription factor binding // inferred from physical interaction","chr13:31034640-31040073 (-) // 79.67 // q12.3"]
["11728809_a_at",-0.124052525,-0.045408726,0.07398796,0.045408726,0.06993532,-0.14766932,0.94252104,0.82602966,-1.0146972,-0.021049263,1.0146972,"down","COL8A1",1295.0,"0001525 // angiogenesis // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0010811 // positive regulation of cell-substrate adhesion // inferred from electronic annotation /// 0048593 // camera-type eye morphogenesis // inferred from electronic annotation /// 0050673 // epithelial cell proliferation // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005581 // collagen // inferred from electronic annotation /// 0005591 // collagen type VIII // traceable author statement /// 0005604 // basement membrane // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from direct assay","","chr3:99357318-99516308 (+) // 92.8 // q12.1"]
["11738305_at",-0.0020093918,-0.059824467,0.09489107,0.06953621,-0.09576845,0.0020093918,0.92824227,0.786346,1.0133225,0.01909336,1.0133225,"up","VAX1",11023.0,"0001764 // neuron migration // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007406 // negative regulation of neuroblast proliferation // inferred from electronic annotation /// 0007411 // axon guidance // inferred from electronic annotation /// 0007417 // central nervous system development // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0043010 // camera-type eye development // inferred from electronic annotation /// 0060021 // palate development // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0000976 // transcription regulatory region sequence-specific DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0031490 // chromatin DNA binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr10:118888031-118897812 (-) // 85.65 // q25.3"]
["11730439_a_at",7.777214E-4,-0.022611618,-7.777214E-4,0.028478622,-0.06098461,0.04425764,0.913629,0.75052416,-1.0079712,-0.011454372,1.0079712,"down","AKAP9",10142.0,"0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006810 // transport // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation","0000242 // pericentriolar material // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005813 // centrosome // traceable author statement /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation","0005102 // receptor binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016301 // kinase activity // inferred from electronic annotation","chr7:91570181-91739989 (+) // 97.67 // q21.2"]
["11724161_a_at",0.018140793,0.16290617,0.11528683,-0.04973364,-0.018140793,-0.06675434,0.31000346,0.03295327,1.1046996,0.14365412,1.1046996,"up","GXYLT1",283464.0,"0016266 // O-glycan processing // inferred from direct assay","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0016763 // transferase activity, transferring pentosyl groups // inferred from electronic annotation /// 0035252 // UDP-xylosyltransferase activity // inferred from direct assay","chr12:42475646-42538673 (-) // 87.68 // q12"]
["11754442_x_at",-0.026970863,0.030820847,0.043164253,0.0030651093,-0.0030651093,-0.12947702,0.6632808,0.29016772,1.041621,0.0588304,1.041621,"up","ELN",2006.0,"0007585 // respiratory gaseous exchange // traceable author statement /// 0008015 // blood circulation // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0009887 // organ morphogenesis // traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // non-traceable author statement /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // traceable author statement","0005201 // extracellular matrix structural constituent // traceable author statement /// 0005201 // extracellular matrix structural constituent // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0030023 // extracellular matrix constituent conferring elasticity // non-traceable author statement","chr7:73442096-73484234 (+) // 89.38 // q11.23"]
["11737592_at",-0.03208995,0.03208995,-0.04339409,0.16698837,0.077790976,-0.12403417,0.8347917,0.57293075,-1.0386525,-0.054713108,1.0386525,"down","EYS",346007.0,"0007601 // visual perception // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr6:64429875-66417118 (-) // 95.74 // q12"]
["11715948_at",0.018238068,0.07048845,0.1718483,-0.20263958,-0.018238068,-0.082756996,0.37457132,0.055659186,1.1392385,0.18806978,1.1392385,"up","KCTD12",115207.0,"0051260 // protein homooligomerization // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0042734 // presynaptic membrane // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","","chr13:77454306-77460540 (-) // 96.41 // q22.3"]
["11744216_at",0.02838707,0.02341652,0.028079033,-0.023416042,-0.092195034,-0.13416004,0.2880205,0.02727976,1.0791419,0.10988452,1.0791419,"up","C15orf57",90416.0,"","","","chr15:40845008-40857252 (-) // 95.3 // q15.1"]
["11741562_a_at",-0.129282,-0.32333207,0.0642705,-9.2840195E-4,0.17658854,9.2840195E-4,0.5967027,0.2106128,-1.1394287,-0.1883107,1.1394287,"down","MME",4311.0,"0001822 // kidney development // inferred from expression pattern /// 0006508 // proteolysis // inferred from direct assay /// 0006508 // proteolysis // inferred from electronic annotation /// 0006518 // peptide metabolic process // inferred from sequence or structural similarity /// 0006518 // peptide metabolic process // inferred from electronic annotation /// 0019233 // sensory perception of pain // inferred from sequence or structural similarity /// 0019233 // sensory perception of pain // inferred from electronic annotation /// 0046449 // creatinine metabolic process // inferred from mutant phenotype /// 0050435 // beta-amyloid metabolic process // inferred from sequence or structural similarity /// 0050435 // beta-amyloid metabolic process // inferred from electronic annotation /// 0071345 // cellular response to cytokine stimulus // inferred from direct assay /// 0071492 // cellular response to UV-A // inferred from direct assay /// 0071493 // cellular response to UV-B // inferred from direct assay /// 0090399 // replicative senescence // inferred from expression pattern","0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0005903 // brush border // inferred from direct assay /// 0008021 // synaptic vesicle // inferred from sequence or structural similarity /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030424 // axon // inferred from sequence or structural similarity /// 0030424 // axon // inferred from electronic annotation /// 0030425 // dendrite // inferred from sequence or structural similarity /// 0030425 // dendrite // inferred from electronic annotation /// 0044306 // neuron projection terminus // inferred from sequence or structural similarity /// 0044306 // neuron projection terminus // inferred from electronic annotation /// 0045202 // synapse // inferred from sequence or structural similarity /// 0045202 // synapse // inferred from electronic annotation","0004175 // endopeptidase activity // inferred from direct assay /// 0004175 // endopeptidase activity // inferred from mutant phenotype /// 0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0004222 // metalloendopeptidase activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042277 // peptide binding // inferred from sequence or structural similarity /// 0042277 // peptide binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:154797644-154901518 (+) // 88.71 // q25.2"]
["11738243_at",-0.08219862,0.2105999,0.013439655,-0.0134391785,0.22842407,-0.06157446,0.9931564,0.97675854,-1.0026767,-0.0038565393,1.0026767,"down","C17orf82",388407.0,"","","","chr17:59489111-59490641 (+) // 98.58 // q23.2"]
["11753459_x_at",0.0066423416,-0.014944077,0.07085037,0.013633728,-0.0066432953,-0.06668472,0.68024427,0.31251425,1.0286467,0.040747568,1.0286467,"up","HNRNPA1",3178.0,"0000380 // alternative nuclear mRNA splicing, via spliceosome // inferred from electronic annotation /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0006397 // mRNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006405 // RNA export from nucleus // inferred by curator /// 0006405 // RNA export from nucleus // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0051028 // mRNA transport // inferred from electronic annotation /// 0051168 // nuclear export // inferred from direct assay /// 0051170 // nuclear import // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from direct assay /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0030530 // heterogeneous nuclear ribonucleoprotein complex // traceable author statement /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003697 // single-stranded DNA binding // inferred from direct assay /// 0003723 // RNA binding // traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0003727 // single-stranded RNA binding // inferred by curator","chr13:53216568-53217622 (+) // 78.65 // q14.3 /// chr12:54674531-54678360 (+) // 91.13 // q13.13 /// chr16:51679668-51680723 (+) // 79.58 // q12.1 /// chr2:201927751-201928806 (+) // 78.3 // q33.1 /// chr18:29992144-29993199 (-) // 79.7 // q12.1 /// chr19:11776851-11777904 (-) // 79.7 // p13.2 /// chr5:79654863-79655918 (-) // 77.36 // q14.1"]
["11725278_at",-0.28126383,0.025765896,-0.119904995,-0.002799511,0.12667894,0.002799511,0.5471335,0.16361465,-1.123002,-0.16736056,1.123002,"down","IHH",3549.0,"0001501 // skeletal system development // inferred from electronic annotation /// 0001503 // ossification // inferred from electronic annotation /// 0001569 // patterning of blood vessels // inferred from electronic annotation /// 0001649 // osteoblast differentiation // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001708 // cell fate specification // inferred from electronic annotation /// 0001763 // morphogenesis of a branching structure // inferred from electronic annotation /// 0001944 // vasculature development // inferred from electronic annotation /// 0001947 // heart looping // inferred from sequence or structural similarity /// 0001947 // heart looping // inferred from electronic annotation /// 0002053 // positive regulation of mesenchymal cell proliferation // inferred from electronic annotation /// 0003382 // epithelial cell morphogenesis // inferred from electronic annotation /// 0003406 // retinal pigment epithelium development // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0007154 // cell communication // inferred from electronic annotation /// 0007224 // smoothened signaling pathway // inferred from electronic annotation /// 0007267 // cell-cell signaling // non-traceable author statement /// 0007267 // cell-cell signaling // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007389 // pattern specification process // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0009880 // embryonic pattern specification // inferred from electronic annotation /// 0009968 // negative regulation of signal transduction // inferred from electronic annotation /// 0016539 // intein-mediated protein splicing // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030704 // vitelline membrane formation // inferred from electronic annotation /// 0031016 // pancreas development // inferred from electronic annotation /// 0032332 // positive regulation of chondrocyte differentiation // inferred from electronic annotation /// 0032355 // response to estradiol stimulus // inferred from electronic annotation /// 0032967 // positive regulation of collagen biosynthetic process // inferred from electronic annotation /// 0033085 // negative regulation of T cell differentiation in thymus // inferred from sequence or structural similarity /// 0033085 // negative regulation of T cell differentiation in thymus // inferred from electronic annotation /// 0033088 // negative regulation of immature T cell proliferation in thymus // inferred from sequence or structural similarity /// 0033088 // negative regulation of immature T cell proliferation in thymus // inferred from electronic annotation /// 0033089 // positive regulation of T cell differentiation in thymus // inferred from sequence or structural similarity /// 0033089 // positive regulation of T cell differentiation in thymus // inferred from electronic annotation /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0035988 // chondrocyte proliferation // inferred from electronic annotation /// 0040008 // regulation of growth // inferred from electronic annotation /// 0043010 // camera-type eye development // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0045453 // bone resorption // inferred from electronic annotation /// 0045595 // regulation of cell differentiation // inferred from electronic annotation /// 0045596 // negative regulation of cell differentiation // inferred from electronic annotation /// 0045880 // positive regulation of smoothened signaling pathway // inferred from sequence or structural similarity /// 0045880 // positive regulation of smoothened signaling pathway // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046638 // positive regulation of alpha-beta T cell differentiation // inferred from sequence or structural similarity /// 0046638 // positive regulation of alpha-beta T cell differentiation // inferred from electronic annotation /// 0046639 // negative regulation of alpha-beta T cell differentiation // inferred from sequence or structural similarity /// 0046639 // negative regulation of alpha-beta T cell differentiation // inferred from electronic annotation /// 0048074 // negative regulation of eye pigmentation // inferred from electronic annotation /// 0048469 // cell maturation // inferred from electronic annotation /// 0048557 // embryonic digestive tract morphogenesis // inferred from electronic annotation /// 0048596 // embryonic camera-type eye morphogenesis // inferred from electronic annotation /// 0048666 // neuron development // inferred from electronic annotation /// 0048745 // smooth muscle tissue development // inferred from electronic annotation /// 0050679 // positive regulation of epithelial cell proliferation // inferred from electronic annotation /// 0051216 // cartilage development // inferred from electronic annotation /// 0060135 // maternal process involved in female pregnancy // inferred from electronic annotation /// 0060220 // camera-type eye photoreceptor cell fate commitment // inferred from electronic annotation /// 0060323 // head morphogenesis // inferred from electronic annotation /// 0061053 // somite development // inferred from sequence or structural similarity /// 0061053 // somite development // inferred from electronic annotation /// 0072498 // embryonic skeletal joint development // inferred from electronic annotation /// 0090136 // epithelial cell-cell adhesion // inferred from electronic annotation","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from electronic annotation","0005113 // patched binding // non-traceable author statement /// 0005113 // patched binding // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0015485 // cholesterol binding // non-traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation","chr2:219919141-219925238 (-) // 98.76 // q35"]
["11746694_a_at",-0.03570938,-0.13241863,0.19218802,0.19748306,-0.10504484,0.03570962,0.9342806,0.80273604,-1.0243409,-0.03469588,1.0243409,"down","PAFAH1B1",5048.0,"0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000087 // M phase of mitotic cell cycle // traceable author statement /// 0000132 // establishment of mitotic spindle orientation // inferred from mutant phenotype /// 0000226 // microtubule cytoskeleton organization // inferred from sequence or structural similarity /// 0000226 // microtubule cytoskeleton organization // inferred from electronic annotation /// 0000236 // mitotic prometaphase // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0001675 // acrosome assembly // inferred from sequence or structural similarity /// 0001675 // acrosome assembly // inferred from electronic annotation /// 0001764 // neuron migration // inferred from mutant phenotype /// 0001764 // neuron migration // inferred from sequence or structural similarity /// 0001764 // neuron migration // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0007017 // microtubule-based process // inferred from direct assay /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0007097 // nuclear migration // inferred from electronic annotation /// 0007268 // synaptic transmission // inferred from sequence or structural similarity /// 0007268 // synaptic transmission // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007405 // neuroblast proliferation // inferred from sequence or structural similarity /// 0007405 // neuroblast proliferation // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0007611 // learning or memory // inferred from sequence or structural similarity /// 0007611 // learning or memory // inferred from electronic annotation /// 0008090 // retrograde axon cargo transport // inferred from sequence or structural similarity /// 0008090 // retrograde axon cargo transport // inferred from electronic annotation /// 0008344 // adult locomotory behavior // inferred from mutant phenotype /// 0008344 // adult locomotory behavior // inferred from electronic annotation /// 0010977 // negative regulation of neuron projection development // inferred from electronic annotation /// 0016042 // lipid catabolic process // inferred from electronic annotation /// 0016477 // cell migration // inferred from electronic annotation /// 0017145 // stem cell division // inferred from electronic annotation /// 0019226 // transmission of nerve impulse // inferred from sequence or structural similarity /// 0019226 // transmission of nerve impulse // inferred from electronic annotation /// 0021540 // corpus callosum morphogenesis // inferred from mutant phenotype /// 0021766 // hippocampus development // inferred from sequence or structural similarity /// 0021766 // hippocampus development // inferred from electronic annotation /// 0021819 // layer formation in cerebral cortex // inferred from sequence or structural similarity /// 0021819 // layer formation in cerebral cortex // inferred from electronic annotation /// 0021895 // cerebral cortex neuron differentiation // inferred from electronic annotation /// 0021987 // cerebral cortex development // inferred from mutant phenotype /// 0021987 // cerebral cortex development // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from sequence or structural similarity /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0031023 // microtubule organizing center organization // inferred from mutant phenotype /// 0032319 // regulation of Rho GTPase activity // inferred from sequence or structural similarity /// 0032319 // regulation of Rho GTPase activity // inferred from electronic annotation /// 0045773 // positive regulation of axon extension // inferred from electronic annotation /// 0045931 // positive regulation of mitotic cell cycle // inferred from electronic annotation /// 0046469 // platelet activating factor metabolic process // inferred from sequence or structural similarity /// 0047496 // vesicle transport along microtubule // inferred from sequence or structural similarity /// 0048854 // brain morphogenesis // inferred from mutant phenotype /// 0050885 // neuromuscular process controlling balance // inferred from mutant phenotype /// 0050885 // neuromuscular process controlling balance // inferred from electronic annotation /// 0051081 // nuclear envelope disassembly // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 0051660 // establishment of centrosome localization // inferred from electronic annotation","0000235 // astral microtubule // inferred from direct assay /// 0000776 // kinetochore // inferred from direct assay /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005626 // insoluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from direct assay /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005813 // centrosome // inferred from sequence or structural similarity /// 0005813 // centrosome // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005871 // kinesin complex // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005875 // microtubule associated complex // inferred from direct assay /// 0005875 // microtubule associated complex // inferred from electronic annotation /// 0005938 // cell cortex // inferred from direct assay /// 0015630 // microtubule cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030426 // growth cone // inferred from electronic annotation /// 0031252 // cell leading edge // inferred from sequence or structural similarity /// 0031252 // cell leading edge // inferred from electronic annotation /// 0031512 // motile primary cilium // inferred from sequence or structural similarity /// 0031512 // motile primary cilium // inferred from electronic annotation /// 0031513 // nonmotile primary cilium // inferred from sequence or structural similarity /// 0031965 // nuclear membrane // inferred from electronic annotation /// 0033267 // axon part // inferred from electronic annotation /// 0042598 // vesicular fraction // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // inferred from sequence or structural similarity /// 0008017 // microtubule binding // inferred from electronic annotation /// 0008201 // heparin binding // inferred from sequence or structural similarity /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0034452 // dynactin binding // inferred from sequence or structural similarity /// 0042803 // protein homodimerization activity // inferred from sequence or structural similarity /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0043274 // phospholipase binding // inferred from sequence or structural similarity /// 0045502 // dynein binding // inferred from direct assay /// 0045505 // dynein intermediate chain binding // inferred from electronic annotation /// 0051219 // phosphoprotein binding // inferred from sequence or structural similarity /// 0051219 // phosphoprotein binding // inferred from electronic annotation","chr17:2570339-2586175 (+) // 74.31 // p13.3"]
["11721694_x_at",-0.1643877,0.0033888817,0.17806673,-0.111044884,0.1610241,-0.0033888817,0.9826265,0.941783,-1.0068444,-0.0098407455,1.0068444,"down","WAS",7454.0,"0006461 // protein complex assembly // traceable author statement /// 0006461 // protein complex assembly // inferred from electronic annotation /// 0006952 // defense response // traceable author statement /// 0006955 // immune response // inferred from mutant phenotype /// 0007596 // blood coagulation // traceable author statement /// 0008154 // actin polymerization or depolymerization // traceable author statement /// 0008154 // actin polymerization or depolymerization // inferred from electronic annotation /// 0008544 // epidermis development // traceable author statement /// 0016197 // endosomal transport // inferred from electronic annotation /// 0030041 // actin filament polymerization // inferred from electronic annotation /// 0030048 // actin filament-based movement // inferred from electronic annotation /// 0042110 // T cell activation // inferred from electronic annotation /// 0050852 // T cell receptor signaling pathway // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0012506 // vesicle membrane // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement","0003779 // actin binding // inferred from electronic annotation /// 0005083 // small GTPase regulator activity // inferred from electronic annotation /// 0005083 // small GTPase regulator activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from electronic annotation","chrX:48534979-48549818 (+) // 90.3 // p11.23"]
["11716750_a_at",0.0054445267,-0.03586769,-0.1250372,0.10133934,-0.0054445267,0.06514835,0.45959622,0.100804135,-1.075868,-0.10550109,1.075868,"down","CD99L2",83692.0,"0007155 // cell adhesion // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","","chrX:149934812-150067289 (-) // 91.72 // q28"]
["11740904_a_at",0.013897896,-0.013897896,-0.18399882,0.07092214,0.047778606,-0.14387631,0.8455318,0.5957231,-1.0373776,-0.052941117,1.0373776,"down","TMEM236",653567.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr10:17794250-17842867 (+) // 64.85 // p12.33 /// chr10:18041217-18089855 (+) // 64.76 // p12.33"]
["11764049_at",0.12081194,0.0,0.06311941,0.0,-0.08029795,-0.014618874,0.45025054,0.09530964,1.0665483,0.09294937,1.0665483,"up","DPYSL4",10570.0,"0006208 // pyrimidine base catabolic process // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0007411 // axon guidance // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0016787 // hydrolase activity // inferred from electronic annotation /// 0016810 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds // inferred from electronic annotation /// 0016812 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides // inferred from electronic annotation","chr10:134018402-134019261 (-) // 97.06 // q26.3"]
["11721543_a_at",-0.0051898956,-0.08730984,-0.2813325,0.0051898956,0.04189205,0.051696777,0.5051049,0.13081919,-1.1153812,-0.15753691,1.1153812,"down","CSRNP1",64651.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006915 // apoptotic process // non-traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from electronic annotation /// 0048705 // skeletal system morphogenesis // inferred from electronic annotation /// 0060021 // palate development // inferred from electronic annotation /// 0060325 // face morphogenesis // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from sequence or structural similarity /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation","chr3:39183341-39188216 (-) // 90.99 // p22.2"]
["11759153_at",0.019201517,-0.019201517,0.68341064,0.4447856,-0.057566643,-0.11910319,0.87381464,0.65767676,1.1007079,0.13843165,1.1007079,"up","KCNAB3",9196.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006813 // potassium ion transport // traceable author statement /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005249 // voltage-gated potassium channel activity // inferred from electronic annotation /// 0015459 // potassium channel regulator activity // traceable author statement","chr17:7825176-7832753 (-) // 98.05 // p13.1"]
["11754114_a_at",0.023162842,0.030089378,-0.079110146,0.0067596436,-0.031879425,-0.0067596436,0.9876092,0.95941883,1.0013922,0.0020071885,1.0013922,"up","CXCL1",2919.0,"0006935 // chemotaxis // traceable author statement /// 0006954 // inflammatory response // inferred from electronic annotation /// 0006954 // inflammatory response // traceable author statement /// 0006955 // immune response // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007399 // nervous system development // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0030036 // actin cytoskeleton organization // traceable author statement /// 0035556 // intracellular signal transduction // traceable author statement /// 0043085 // positive regulation of catalytic activity // traceable author statement","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0005622 // intracellular // traceable author statement","0005102 // receptor binding // traceable author statement /// 0005125 // cytokine activity // inferred from electronic annotation /// 0008009 // chemokine activity // inferred from electronic annotation /// 0008009 // chemokine activity // traceable author statement /// 0008047 // enzyme activator activity // traceable author statement /// 0008083 // growth factor activity // inferred from electronic annotation","chr4:74735126-74736388 (+) // 96.71 // q13.3 /// chr4:74963337-74964895 (-) // 90.52 // q13.3"]
["11716438_at",0.0091609955,0.01736164,0.047154427,-0.05886364,-0.0091609955,-0.05355549,0.29509005,0.029049484,1.0461471,0.06508574,1.0461471,"up","RAD21",5885.0,"0000087 // M phase of mitotic cell cycle // traceable author statement /// 0000236 // mitotic prometaphase // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006302 // double-strand break repair // traceable author statement /// 0006310 // DNA recombination // traceable author statement /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007059 // chromosome segregation // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0007091 // mitotic metaphase/anaphase transition // traceable author statement /// 0007131 // reciprocal meiotic recombination // traceable author statement /// 0051301 // cell division // inferred from electronic annotation /// 0071168 // protein localization to chromatin // inferred from mutant phenotype","0000228 // nuclear chromosome // inferred from electronic annotation /// 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0008278 // cohesin complex // traceable author statement","0005515 // protein binding // inferred from physical interaction","chr8:117858172-117887109 (-) // 96.69 // q24.11"]
["11733765_at",-0.15635705,-0.048350334,-0.033462763,0.033462524,0.12636185,0.18117476,0.29509005,0.029063934,-1.1431831,-0.19305651,1.1431831,"down","IFNB1",3456.0,"0002250 // adaptive immune response // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from direct assay /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // non-traceable author statement /// 0006952 // defense response // inferred from electronic annotation /// 0006959 // humoral immune response // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008285 // negative regulation of cell proliferation // non-traceable author statement /// 0009615 // response to virus // non-traceable author statement /// 0009615 // response to virus // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0030101 // natural killer cell activation // non-traceable author statement /// 0032897 // negative regulation of viral transcription // inferred from direct assay /// 0042100 // B cell proliferation // non-traceable author statement /// 0042742 // defense response to bacterium // inferred from electronic annotation /// 0045071 // negative regulation of viral genome replication // inferred from direct assay /// 0045087 // innate immune response // traceable author statement /// 0045089 // positive regulation of innate immune response // non-traceable author statement /// 0045343 // regulation of MHC class I biosynthetic process // non-traceable author statement /// 0045581 // negative regulation of T cell differentiation // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0046597 // negative regulation of viral entry into host cell // non-traceable author statement /// 0051607 // defense response to virus // inferred from direct assay /// 0051607 // defense response to virus // inferred from electronic annotation /// 0060337 // type I interferon-mediated signaling pathway // traceable author statement /// 0060338 // regulation of type I interferon-mediated signaling pathway // traceable author statement /// 0071360 // cellular response to exogenous dsRNA // inferred from mutant phenotype /// 2000552 // negative regulation of T-helper 2 cell cytokine production // inferred from direct assay","0005576 // extracellular region // inferred by curator /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation","0003714 // transcription corepressor activity // inferred from direct assay /// 0005125 // cytokine activity // inferred from electronic annotation /// 0005126 // cytokine receptor binding // inferred from electronic annotation /// 0005132 // interferon-alpha/beta receptor binding // non-traceable author statement","chr9:21077103-21077962 (-) // 89.89 // p21.3"]
["11734865_a_at",0.012476921,0.0041399,0.05316639,-0.03339386,-0.02902317,-0.0041399,0.3896729,0.061890054,1.0320027,0.045446727,1.0320027,"up","PSMC3IP",29893.0,"0006310 // DNA recombination // inferred from electronic annotation /// 0007126 // meiosis // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0030331 // estrogen receptor binding // inferred from electronic annotation /// 0030374 // ligand-dependent nuclear receptor transcription coactivator activity // inferred from mutant phenotype /// 0030374 // ligand-dependent nuclear receptor transcription coactivator activity // inferred from electronic annotation /// 0035259 // glucocorticoid receptor binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0046966 // thyroid hormone receptor binding // inferred from electronic annotation /// 0050681 // androgen receptor binding // inferred from electronic annotation /// 0050692 // DBD domain binding // inferred from electronic annotation","chr17:40724316-40729756 (-) // 96.59 // q21.2"]
["11754900_a_at",0.021186352,0.034205914,-0.1219697,-0.021186352,0.14347553,-0.05829811,0.85387355,0.6139177,-1.0306274,-0.04352281,1.0306274,"down","SAMD14",201191.0,"","","","chr17:48190032-48192388 (-) // 83.16 // q21.33"]
["11751304_a_at",-0.13057709,0.14940977,-0.2135377,0.043394566,-0.043394566,0.1322937,0.75152236,0.41843036,-1.0784801,-0.10899959,1.0784801,"down","ITGAL",3683.0,"0002291 // T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell // inferred from mutant phenotype /// 0006928 // cellular component movement // traceable author statement /// 0006954 // inflammatory response // non-traceable author statement /// 0007155 // cell adhesion // non-traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007157 // heterophilic cell-cell adhesion // inferred from mutant phenotype /// 0007159 // leukocyte cell-cell adhesion // inferred from mutant phenotype /// 0007159 // leukocyte cell-cell adhesion // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007229 // integrin-mediated signaling pathway // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0016337 // cell-cell adhesion // inferred from electronic annotation /// 0022407 // regulation of cell-cell adhesion // inferred from electronic annotation /// 0022409 // positive regulation of cell-cell adhesion // inferred from electronic annotation /// 0042102 // positive regulation of T cell proliferation // inferred from electronic annotation /// 0050776 // regulation of immune response // traceable author statement /// 0050798 // activated T cell proliferation // inferred from electronic annotation /// 0050850 // positive regulation of calcium-mediated signaling // inferred from electronic annotation /// 0050900 // leukocyte migration // traceable author statement","0001772 // immunological synapse // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0008305 // integrin complex // non-traceable author statement /// 0008305 // integrin complex // inferred from electronic annotation /// 0008305 // integrin complex // traceable author statement /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0050839 // cell adhesion molecule binding // inferred from physical interaction","chr16:30484071-30533100 (+) // 92.66 // p11.2"]
["11716195_a_at",-0.04321289,-0.04265213,0.039135933,-0.005022049,0.0074567795,0.005022049,0.8237947,0.54886293,-1.0125983,-0.018061932,1.0125983,"down","ID1",3397.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001525 // angiogenesis // traceable author statement /// 0001886 // endothelial cell morphogenesis // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0010621 // negative regulation of transcription by transcription factor localization // traceable author statement /// 0030509 // BMP signaling pathway // inferred from electronic annotation /// 0031648 // protein destabilization // inferred from electronic annotation /// 0032963 // collagen metabolic process // inferred from electronic annotation /// 0043392 // negative regulation of DNA binding // inferred from electronic annotation /// 0043408 // regulation of MAPK cascade // inferred from electronic annotation /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0043534 // blood vessel endothelial cell migration // traceable author statement /// 0045668 // negative regulation of osteoblast differentiation // inferred from electronic annotation /// 0045765 // regulation of angiogenesis // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0046677 // response to antibiotic // inferred from electronic annotation /// 0048514 // blood vessel morphogenesis // traceable author statement /// 0060425 // lung morphogenesis // inferred from electronic annotation /// 0060426 // lung vasculature development // inferred from electronic annotation","0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred by curator /// 0005737 // cytoplasm // inferred from electronic annotation","0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr20:30193090-30194318 (+) // 91.69 // q11.21"]
["11750049_x_at",-0.17155719,0.073768616,-0.15937638,0.14619446,-0.073768616,0.21223855,0.5856111,0.19960663,-1.1333628,-0.18060972,1.1333628,"down","LILRB5",10990.0,"0006952 // defense response // traceable author statement /// 0007166 // cell surface receptor signaling pathway // traceable author statement","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // traceable author statement","chr19:54758782-54761148 (-) // 99.78 // q13.42"]
["11743445_a_at",0.0013628006,-0.03204012,0.06752443,0.010568619,-0.0013628006,-0.18545341,0.7179778,0.366798,1.0504675,0.07103152,1.0504675,"up","SUPT6H",6830.0,"0006139 // nucleobase-containing compound metabolic process // inferred from electronic annotation /// 0006338 // chromatin remodeling // non-traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0032784 // regulation of transcription elongation, DNA-dependent // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0016788 // hydrolase activity, acting on ester bonds // inferred from electronic annotation","chr17:26989215-27029249 (+) // 97.82 // q11.2"]
["11758690_s_at",0.022685528,0.16956139,-0.13983202,-0.13053465,-0.022685051,0.063399315,0.8821955,0.6764302,1.0334092,0.047411684,1.0334092,"up","CRIPAK",285464.0,"0006469 // negative regulation of protein kinase activity // inferred from direct assay /// 0033147 // negative regulation of intracellular estrogen receptor signaling pathway // inferred from direct assay /// 0043627 // response to estrogen stimulus // inferred from direct assay /// 0051493 // regulation of cytoskeleton organization // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr4:1389555-1389777 (+) // 100.0 // p16.3"]
["11748276_a_at",-0.018122196,0.04813528,-0.114070415,0.101605415,4.196167E-5,-4.196167E-5,0.70465726,0.34608722,-1.0438306,-0.061887644,1.0438306,"down","CANT1",124583.0,"0007165 // signal transduction // inferred from mutant phenotype /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from mutant phenotype","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from mutant phenotype /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0016462 // pyrophosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0017110 // nucleoside-diphosphatase activity // inferred from electronic annotation /// 0045134 // uridine-diphosphatase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:76989568-77005875 (-) // 90.57 // q25.3"]
["11757200_x_at",-0.22121263,-0.21348023,0.001180172,0.27280545,-0.001180172,0.08484316,0.41205406,0.072884224,-1.2002435,-0.2633271,1.2002435,"down","LOC285696",285696.0,"","","","chr5:17130625-17217531 (-) // 57.9 // p15.1"]
["11726485_at",-0.03954506,-0.2711811,-0.59027386,0.12699223,0.25477982,0.03954506,0.3897097,0.061918046,-1.3573308,-0.44077235,1.3573308,"down","CPED1",79974.0,"","0005783 // endoplasmic reticulum // inferred from direct assay","","chr7:120628730-120937575 (+) // 95.28 // q31.31"]
["11740288_a_at",-0.026135445,0.20060992,0.01836133,0.16433954,-0.14132667,-0.01836133,0.851199,0.6074109,1.0444388,0.06272801,1.0444388,"up","CHRNA1",1134.0,"0003009 // skeletal muscle contraction // inferred from mutant phenotype /// 0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007274 // neuromuscular synaptic transmission // inferred from mutant phenotype /// 0007528 // neuromuscular junction development // inferred from mutant phenotype /// 0019228 // regulation of action potential in neuron // inferred from mutant phenotype /// 0042391 // regulation of membrane potential // inferred from mutant phenotype /// 0046716 // muscle cell homeostasis // inferred from mutant phenotype /// 0048630 // skeletal muscle tissue growth // inferred from mutant phenotype /// 0050881 // musculoskeletal movement // inferred from mutant phenotype /// 0050905 // neuromuscular process // inferred from mutant phenotype /// 0070050 // neuron homeostasis // inferred from mutant phenotype","0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005892 // acetylcholine-gated channel complex // inferred from sequence or structural similarity /// 0005892 // acetylcholine-gated channel complex // inferred from electronic annotation /// 0005892 // acetylcholine-gated channel complex // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0031594 // neuromuscular junction // inferred from direct assay /// 0031594 // neuromuscular junction // inferred from sequence or structural similarity /// 0031594 // neuromuscular junction // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // non-traceable author statement /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004889 // acetylcholine-activated cation-selective channel activity // inferred from mutant phenotype /// 0004889 // acetylcholine-activated cation-selective channel activity // inferred from sequence or structural similarity /// 0004889 // acetylcholine-activated cation-selective channel activity // inferred from electronic annotation /// 0004889 // acetylcholine-activated cation-selective channel activity // traceable author statement /// 0005216 // ion channel activity // traceable author statement /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005230 // extracellular ligand-gated ion channel activity // inferred from electronic annotation /// 0015464 // acetylcholine receptor activity // inferred from sequence or structural similarity /// 0015464 // acetylcholine receptor activity // inferred from electronic annotation /// 0015464 // acetylcholine receptor activity // traceable author statement /// 0042166 // acetylcholine binding // inferred from sequence or structural similarity /// 0042166 // acetylcholine binding // inferred from electronic annotation","chr2:175612326-175629200 (-) // 95.18 // q31.1"]
["11732930_a_at",-0.036936283,0.032296658,0.011088848,-0.011088371,-0.18315697,0.1067934,0.90796757,0.73617834,1.0219328,0.03130039,1.0219328,"up","SLC6A18",348932.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006836 // neurotransmitter transport // inferred from electronic annotation /// 0006865 // amino acid transport // traceable author statement /// 0006865 // amino acid transport // inferred from electronic annotation /// 0006970 // response to osmotic stress // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005328 // neurotransmitter:sodium symporter activity // inferred from electronic annotation /// 0015293 // symporter activity // inferred from electronic annotation","chr5:1225469-1246304 (+) // 96.54 // p15.33"]
["11761374_x_at",0.021780014,-0.020457268,-0.2069149,-0.1959219,0.02045679,0.24441671,0.83033514,0.5628477,-1.0654882,-0.09151464,1.0654882,"down","AGPAT4",56895.0,"0008152 // metabolic process // inferred from electronic annotation /// 0008654 // phospholipid biosynthetic process // non-traceable author statement /// 0008654 // phospholipid biosynthetic process // inferred from electronic annotation /// 0016024 // CDP-diacylglycerol biosynthetic process // inferred from electronic annotation /// 0019432 // triglyceride biosynthetic process // traceable author statement /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003841 // 1-acylglycerol-3-phosphate O-acyltransferase activity // non-traceable author statement /// 0003841 // 1-acylglycerol-3-phosphate O-acyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation","chr6:161567554-161695056 (-) // 99.56 // q26"]
["11735940_s_at",0.025140285,-0.0010693073,-0.078276634,0.0010693073,0.060018778,-0.07815266,0.9399232,0.81893945,-1.0086184,-0.012380385,1.0086184,"down","DEFB103A /// DEFB103B","414325 /// 55894","0006952 // defense response // inferred from electronic annotation /// 0006965 // positive regulation of biosynthetic process of antibacterial peptides active against Gram-positive bacteria // traceable author statement /// 0042742 // defense response to bacterium // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005796 // Golgi lumen // traceable author statement","","chr8:7738725-7740178 (+) // 97.51 // p23.1 /// chr8:7286417-7287870 (-) // 97.51 // p23.1"]
["11763775_s_at",0.18874168,0.1456821,-0.050162315,-0.13059545,-0.116365194,0.050162554,0.54596543,0.162038,1.1175607,0.16035324,1.1175607,"up","LOC100130927",1.00130927E8,"","","","chr6:3150252-3152439 (+) // 97.58 // p25.2"]
["11746791_s_at",-0.17197132,-0.11367607,0.08241367,0.119464874,-0.060055733,0.060055733,0.6809021,0.3132329,-1.0774091,-0.107566215,1.0774091,"down","BECN1",8678.0,"0000045 // autophagic vacuole assembly // inferred from electronic annotation /// 0000910 // cytokinesis // inferred from mutant phenotype /// 0006914 // autophagy // inferred from electronic annotation /// 0006916 // anti-apoptosis // traceable author statement /// 0006968 // cellular defense response // traceable author statement /// 0007040 // lysosome organization // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0009615 // response to virus // inferred from electronic annotation /// 0016239 // positive regulation of macroautophagy // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0048666 // neuron development // inferred from electronic annotation /// 0050435 // beta-amyloid metabolic process // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 0051707 // response to other organism // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr17:40962325-40976305 (-) // 99.81 // q21.31"]
["11759943_at",0.24282265,0.10421848,0.07272339,-0.12660837,-0.18884087,-0.07272339,0.21451639,0.012278579,1.2052332,0.26931232,1.2052332,"up","FAM13A",10144.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0005096 // GTPase activator activity // inferred from electronic annotation","chr4:89910628-89978496 (-) // 92.75 // q22.1"]
["11746425_x_at",0.046896458,0.066101074,-0.078755856,0.011753559,-0.06420994,-0.011753559,0.82540345,0.55250454,1.0230079,0.032817245,1.0230079,"up","ZSCAN2",54993.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0016032 // viral reproduction // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr15:85144239-85166948 (+) // 98.24 // q25.2"]
["11716822_a_at",-0.016881943,-0.03651619,-0.010256767,0.010256767,0.030539513,0.0620203,0.30247766,0.030948924,-1.0392123,-0.055490475,1.0392123,"down","BDH2 /// SLC9B2","133308 /// 56898","0006635 // fatty acid beta-oxidation // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // inferred from electronic annotation /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009239 // enterobactin biosynthetic process // inferred from electronic annotation /// 0015992 // proton transport // inferred from electronic annotation /// 0019290 // siderophore biosynthetic process // inferred from sequence or structural similarity /// 0019290 // siderophore biosynthetic process // inferred from electronic annotation /// 0042168 // heme metabolic process // inferred from sequence or structural similarity /// 0055072 // iron ion homeostasis // inferred from sequence or structural similarity /// 0055072 // iron ion homeostasis // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003858 // 3-hydroxybutyrate dehydrogenase activity // inferred from direct assay /// 0003858 // 3-hydroxybutyrate dehydrogenase activity // inferred from electronic annotation /// 0008667 // 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase activity // inferred from electronic annotation /// 0015297 // antiporter activity // inferred from electronic annotation /// 0015299 // solute:hydrogen antiporter activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016628 // oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor // inferred from sequence or structural similarity /// 0016628 // oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0051287 // NAD binding // inferred from direct assay","chr4:103998764-104021064 (-) // 75.83 // q24"]
["11757216_x_at",0.011177063,0.23415804,-0.011177063,-0.091537476,0.43401957,-0.13724136,0.98894,0.9637461,1.0067037,0.009639171,1.0067037,"up","LOC100268168",1.00268168E8,"","","","chr5:172381784-172386371 (-) // 65.87 // q35.1"]
["11746931_a_at",0.1670165,-0.052117825,0.007997036,-0.007997036,0.02573204,-0.018854141,0.8332274,0.56916684,1.029068,0.041338306,1.029068,"up","INHBA",3624.0,"0000082 // G1/S transition of mitotic cell cycle // inferred from direct assay /// 0001541 // ovarian follicle development // inferred from genetic interaction /// 0001541 // ovarian follicle development // non-traceable author statement /// 0001707 // mesoderm formation // inferred from electronic annotation /// 0001942 // hair follicle development // inferred from genetic interaction /// 0002244 // hemopoietic progenitor cell differentiation // inferred from direct assay /// 0002244 // hemopoietic progenitor cell differentiation // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006917 // induction of apoptosis // inferred from direct assay /// 0006917 // induction of apoptosis // inferred from sequence or structural similarity /// 0006952 // defense response // traceable author statement /// 0007050 // cell cycle arrest // inferred from direct assay /// 0007050 // cell cycle arrest // inferred from sequence or structural similarity /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0007399 // nervous system development // non-traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0008584 // male gonad development // inferred from genetic interaction /// 0010862 // positive regulation of pathway-restricted SMAD protein phosphorylation // inferred from direct assay /// 0030154 // cell differentiation // traceable author statement /// 0030218 // erythrocyte differentiation // non-traceable author statement /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0032925 // regulation of activin receptor signaling pathway // inferred from direct assay /// 0040007 // growth // inferred from electronic annotation /// 0042326 // negative regulation of phosphorylation // traceable author statement /// 0042476 // odontogenesis // inferred from genetic interaction /// 0042541 // hemoglobin biosynthetic process // inferred from direct assay /// 0042541 // hemoglobin biosynthetic process // inferred from sequence or structural similarity /// 0042701 // progesterone secretion // inferred from genetic interaction /// 0045077 // negative regulation of interferon-gamma biosynthetic process // traceable author statement /// 0045578 // negative regulation of B cell differentiation // traceable author statement /// 0045648 // positive regulation of erythrocyte differentiation // inferred from direct assay /// 0045650 // negative regulation of macrophage differentiation // traceable author statement /// 0045786 // negative regulation of cell cycle // inferred from direct assay /// 0045786 // negative regulation of cell cycle // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046880 // regulation of follicle-stimulating hormone secretion // inferred from genetic interaction /// 0046881 // positive regulation of follicle-stimulating hormone secretion // traceable author statement /// 0046882 // negative regulation of follicle-stimulating hormone secretion // non-traceable author statement /// 0048333 // mesodermal cell differentiation // inferred from electronic annotation /// 0051799 // negative regulation of hair follicle development // inferred from direct assay /// 0060021 // palate development // inferred from genetic interaction /// 0060279 // positive regulation of ovulation // inferred from sequence or structural similarity /// 0060279 // positive regulation of ovulation // inferred from electronic annotation /// 0061029 // eyelid development in camera-type eye // inferred from sequence or structural similarity /// 0061029 // eyelid development in camera-type eye // inferred from electronic annotation /// 0071372 // cellular response to follicle-stimulating hormone stimulus // inferred from electronic annotation /// 0071397 // cellular response to cholesterol // inferred from electronic annotation","0005576 // extracellular region // inferred from direct assay /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005576 // extracellular region // inferred from sequence or structural similarity /// 0043509 // activin A complex // inferred from direct assay /// 0043512 // inhibin A complex // inferred from direct assay /// 0043512 // inhibin A complex // inferred from electronic annotation","0005102 // receptor binding // inferred from electronic annotation /// 0005125 // cytokine activity // inferred from direct assay /// 0005125 // cytokine activity // inferred from sequence or structural similarity /// 0005179 // hormone activity // traceable author statement /// 0005179 // hormone activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // traceable author statement /// 0008083 // growth factor activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from sequence or structural similarity /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0070699 // type II activin receptor binding // inferred from physical interaction","chr7:41729131-41740373 (-) // 85.27 // p14.1"]
["11751984_x_at",-0.026447773,0.029599667,0.0011839867,0.009439468,-0.0011839867,-0.024080276,0.9096544,0.7409473,1.004669,0.0067201965,1.004669,"up","DSTYK",25778.0,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004712 // protein serine/threonine/tyrosine kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr1:205114676-205180727 (-) // 85.37 // q32.1"]
["11744566_a_at",0.0511837,0.015520096,0.086094856,-0.029500961,-0.022815704,-0.015520096,0.27566847,0.023992281,1.0522994,0.07354521,1.0522994,"up","DDX49",54555.0,"","","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr19:19030522-19039435 (+) // 94.25 // p13.11"]
["11733738_a_at",0.016179085,-0.084625244,-0.016179085,-0.084485054,0.07015228,0.09591675,0.7605416,0.43344766,-1.0391494,-0.05540309,1.0391494,"down","KRIT1",889.0,"0001525 // angiogenesis // inferred from electronic annotation /// 0001937 // negative regulation of endothelial cell proliferation // inferred from mutant phenotype /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0010596 // negative regulation of endothelial cell migration // inferred from mutant phenotype /// 0016525 // negative regulation of angiogenesis // inferred from mutant phenotype /// 0016525 // negative regulation of angiogenesis // inferred from electronic annotation /// 0032092 // positive regulation of protein binding // inferred from electronic annotation /// 0045454 // cell redox homeostasis // inferred from mutant phenotype /// 0045454 // cell redox homeostasis // inferred from electronic annotation /// 2000114 // regulation of establishment of cell polarity // inferred from mutant phenotype /// 2000114 // regulation of establishment of cell polarity // inferred from electronic annotation /// 2000352 // negative regulation of endothelial cell apoptotic process // inferred from mutant phenotype","0005856 // cytoskeleton // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0005083 // small GTPase regulator activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr7:91828282-91875237 (-) // 83.25 // q21.2"]
["11737102_at",-0.09287977,-0.020662308,0.06714988,0.018930435,0.07817149,-0.018930435,0.79139507,0.4864563,-1.0291985,-0.041521296,1.0291985,"down","RFX6",222546.0,"0003309 // type B pancreatic cell differentiation // inferred from sequence or structural similarity /// 0003309 // type B pancreatic cell differentiation // inferred from electronic annotation /// 0003310 // pancreatic A cell differentiation // inferred from sequence or structural similarity /// 0003310 // pancreatic A cell differentiation // inferred from electronic annotation /// 0003311 // pancreatic D cell differentiation // inferred from sequence or structural similarity /// 0003311 // pancreatic D cell differentiation // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0031018 // endocrine pancreas development // inferred from mutant phenotype /// 0042593 // glucose homeostasis // inferred from mutant phenotype /// 0042593 // glucose homeostasis // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0050796 // regulation of insulin secretion // inferred from mutant phenotype /// 0050796 // regulation of insulin secretion // inferred from electronic annotation /// 0090104 // pancreatic E cell differentiation // inferred from sequence or structural similarity /// 0090104 // pancreatic E cell differentiation // inferred from electronic annotation","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay","chr6:117198374-117253306 (+) // 98.39 // q22.1"]
["11732127_a_at",-0.05103588,-0.022140503,-0.14801693,0.060100555,0.08247852,0.022140503,0.3255172,0.037406504,-1.0932608,-0.12863755,1.0932608,"down","CCT4",10575.0,"0006457 // protein folding // traceable author statement /// 0006457 // protein folding // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0044267 // cellular protein metabolic process // inferred from electronic annotation /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005832 // chaperonin-containing T-complex // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0042470 // melanosome // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // traceable author statement","chr2:62095223-62116028 (-) // 98.32 // p15"]
["11747565_a_at",-0.018278599,0.26536894,0.018279076,0.10234165,-0.14593554,-0.032900333,0.7233606,0.37555975,1.0821905,0.1139545,1.0821905,"up","PPP2R4",5524.0,"0000413 // protein peptidyl-prolyl isomerization // inferred from electronic annotation /// 0006200 // ATP catabolic process // inferred from direct assay /// 0006457 // protein folding // inferred from electronic annotation /// 0032515 // negative regulation of phosphoprotein phosphatase activity // inferred from direct assay /// 0032516 // positive regulation of phosphoprotein phosphatase activity // inferred from direct assay /// 0035307 // positive regulation of protein dephosphorylation // inferred from direct assay /// 0035308 // negative regulation of protein dephosphorylation // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0043666 // regulation of phosphoprotein phosphatase activity // inferred from direct assay","0000159 // protein phosphatase type 2A complex // traceable author statement /// 0005625 // soluble fraction // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0034704 // calcium channel complex // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003755 // peptidyl-prolyl cis-trans isomerase activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0008160 // protein tyrosine phosphatase activator activity // inferred from direct assay /// 0008160 // protein tyrosine phosphatase activator activity // traceable author statement /// 0008601 // protein phosphatase type 2A regulator activity // inferred from direct assay /// 0008601 // protein phosphatase type 2A regulator activity // traceable author statement /// 0016853 // isomerase activity // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from direct assay /// 0019211 // phosphatase activator activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046982 // protein heterodimerization activity // traceable author statement /// 0051721 // protein phosphatase 2A binding // inferred from direct assay","chr9:131873596-131909864 (+) // 99.92 // q34.11"]
["11751365_x_at",-0.015207291,0.015207291,0.029170036,-0.13408709,-0.060122967,0.034953117,0.65719235,0.28271163,1.0444975,0.06280903,1.0444975,"up","SLC47A1",55244.0,"0006810 // transport // inferred from electronic annotation /// 0006855 // drug transmembrane transport // inferred from electronic annotation /// 0015695 // organic cation transport // inferred from electronic annotation /// 0015893 // drug transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005624 // membrane fraction // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005451 // monovalent cation:hydrogen antiporter activity // inferred from electronic annotation /// 0015238 // drug transmembrane transporter activity // inferred from electronic annotation /// 0015297 // antiporter activity // inferred from electronic annotation","chr17:19458885-19481250 (+) // 99.78 // p11.2"]
["11742243_a_at",2.9277802E-4,0.02994585,-0.10678339,-2.9277802E-4,-0.07560444,0.062127113,0.9070083,0.7344815,-1.0146097,-0.02092485,1.0146097,"down","ATF3",467.0,"0006094 // gluconeogenesis // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003714 // transcription corepressor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation","chr1:212781993-212794117 (+) // 100.0 // q32.3"]
["11722932_at",0.050736427,0.04581213,0.037852764,-0.113248825,-0.24093246,-0.037852287,0.338177,0.04176869,1.1293387,0.17547828,1.1293387,"up","CHML",1122.0,"0006886 // intracellular protein transport // inferred from electronic annotation /// 0007601 // visual perception // traceable author statement /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation","0005968 // Rab-protein geranylgeranyltransferase complex // inferred from electronic annotation","0004663 // Rab geranylgeranyltransferase activity // inferred from electronic annotation /// 0005096 // GTPase activator activity // inferred from electronic annotation","chr1:241792165-241799496 (-) // 89.4 // q43"]
["11718461_at",0.05253935,-0.1852603,-0.05253935,0.15347147,-0.0581851,0.15623331,0.60240036,0.21488577,-1.1061854,-0.14559326,1.1061854,"down","SLC39A11",201266.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006829 // zinc ion transport // inferred from electronic annotation /// 0030001 // metal ion transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0046873 // metal ion transmembrane transporter activity // inferred from electronic annotation","chr17:70642087-71088853 (-) // 96.13 // q24.3"]
["11759436_at",0.072455406,-0.1636014,0.15057015,-0.015208721,-0.13877416,0.015208721,0.83131087,0.565214,1.0468582,0.06606603,1.0468582,"up","BCL2L10",10017.0,"0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from direct assay /// 0006916 // anti-apoptosis // inferred from electronic annotation /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // traceable author statement /// 0007283 // spermatogenesis // traceable author statement /// 0007292 // female gamete generation // traceable author statement /// 0042981 // regulation of apoptotic process // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr15:52401459-52404972 (-) // 97.41 // q21.2"]
["11764100_at",-0.024148703,0.1529901,-0.23214078,0.024148464,0.15272069,-0.14541602,0.920478,0.76576984,-1.0316242,-0.044917516,1.0316242,"down","","","","","","chr18:72879712-72880241 (+) // 99.25 // q22.3"]
["11751378_a_at",-0.16361618,-0.060627937,0.0038557053,0.016988754,-0.003835678,0.003836155,0.5682472,0.1826858,-1.0563778,-0.079125844,1.0563778,"down","TMEM161B",153396.0,"0015074 // DNA integration // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation","chr5:87491644-87516448 (-) // 99.93 // q14.3"]
["11738895_at",-0.011558533,0.02517414,-0.033594847,0.08262849,-0.007030487,0.007030487,0.709766,0.3545453,-1.0239906,-0.034202516,1.0239906,"down","CAPN10",11132.0,"0006508 // proteolysis // inferred from mutant phenotype /// 0006508 // proteolysis // inferred from electronic annotation /// 0031532 // actin cytoskeleton reorganization // inferred from sequence or structural similarity /// 0031532 // actin cytoskeleton reorganization // inferred from electronic annotation /// 0032024 // positive regulation of insulin secretion // inferred from mutant phenotype /// 0032388 // positive regulation of intracellular transport // inferred from sequence or structural similarity /// 0032388 // positive regulation of intracellular transport // inferred from electronic annotation /// 0032869 // cellular response to insulin stimulus // inferred from mutant phenotype /// 0032869 // cellular response to insulin stimulus // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0046326 // positive regulation of glucose import // inferred from mutant phenotype /// 0046326 // positive regulation of glucose import // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005623 // cell // inferred from direct assay /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from sequence or structural similarity","0000149 // SNARE binding // inferred from sequence or structural similarity /// 0004198 // calcium-dependent cysteine-type endopeptidase activity // inferred from mutant phenotype /// 0004198 // calcium-dependent cysteine-type endopeptidase activity // inferred from electronic annotation /// 0008092 // cytoskeletal protein binding // inferred from sequence or structural similarity /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr2:241526151-241557122 (+) // 32.06 // q37.3"]
["11742495_x_at",0.07463217,-0.009312391,0.009312391,-0.017620325,-0.14787722,0.04492116,0.709879,0.35476583,1.0461353,0.06506946,1.0461353,"up","SFTPA1 /// SFTPA2","653509 /// 729238","0006869 // lipid transport // traceable author statement /// 0007585 // respiratory gaseous exchange // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005581 // collagen // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation","0005319 // lipid transporter activity // traceable author statement /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr10:81370715-81375202 (+) // 77.73 // q22.3"]
["11744252_at",-0.01424551,0.036853552,0.09359527,-0.16834474,-0.121174574,0.01424551,0.47025532,0.106932886,1.0946672,0.13049233,1.0946672,"up","RFX3",5991.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007368 // determination of left/right symmetry // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0031018 // endocrine pancreas development // inferred from sequence or structural similarity /// 0031018 // endocrine pancreas development // inferred from electronic annotation /// 0042384 // cilium assembly // inferred from sequence or structural similarity /// 0042384 // cilium assembly // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048469 // cell maturation // inferred from sequence or structural similarity /// 0048469 // cell maturation // inferred from electronic annotation /// 0050796 // regulation of insulin secretion // inferred from sequence or structural similarity /// 0050796 // regulation of insulin secretion // inferred from electronic annotation /// 0060285 // ciliary cell motility // inferred from sequence or structural similarity /// 0060285 // ciliary cell motility // inferred from electronic annotation /// 0060287 // epithelial cilium movement involved in determination of left/right asymmetry // inferred from sequence or structural similarity /// 0060287 // epithelial cilium movement involved in determination of left/right asymmetry // inferred from electronic annotation /// 0072560 // type B pancreatic cell maturation // inferred from electronic annotation /// 2000078 // positive regulation of type B pancreatic cell development // inferred from sequence or structural similarity /// 2000078 // positive regulation of type B pancreatic cell development // inferred from electronic annotation","0000790 // nuclear chromatin // inferred from direct assay /// 0000790 // nuclear chromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005667 // transcription factor complex // inferred by curator","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from electronic annotation","chr9:3223736-3525983 (-) // 95.14 // p24.2"]
["11741891_at",-0.04433489,-0.06508541,0.10441017,0.010601521,0.03352022,-0.010601521,0.9426225,0.826443,-1.0089421,-0.0128434235,1.0089421,"down","EVX2",344191.0,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0035108 // limb morphogenesis // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr2:176944834-176948690 (-) // 82.44 // q31.1"]
["11762844_x_at",-0.04359293,0.016900063,0.024449348,-0.21292782,-0.01690054,0.117902756,0.90422934,0.7291496,1.0256658,0.036560666,1.0256658,"up","ITFG2",55846.0,"","","","chr12:2914296-2929390 (+) // 65.89 // p13.33"]
["11719969_a_at",-0.055244446,-0.046883583,0.012740135,0.02033329,-0.012740135,0.017971039,0.57006717,0.18427458,-1.0269154,-0.038317375,1.0269154,"down","NVL",4931.0,"","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0016235 // aggresome // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0005524 // ATP binding // traceable author statement /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation","chr1:224415046-224518089 (-) // 97.84 // q42.11"]
["11759599_at",0.008338928,-0.008338928,-0.013235569,-0.04412079,0.08451319,0.07783651,0.71307224,0.35890278,-1.0308408,-0.04382148,1.0308408,"down","PNISR",25957.0,"","0005634 // nucleus // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation","","chr6:99856014-99873184 (-) // 89.06 // q16.2"]
["11735502_a_at",-0.063949585,-0.047380447,-0.014313698,0.03935194,0.03170061,0.014314175,0.21737091,0.012660035,-1.0499618,-0.07033685,1.0499618,"down","TAPBP",6892.0,"0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006461 // protein complex assembly // traceable author statement /// 0006890 // retrograde vesicle-mediated transport, Golgi to ER // non-traceable author statement /// 0006955 // immune response // traceable author statement /// 0019885 // antigen processing and presentation of endogenous peptide antigen via MHC class I // inferred from electronic annotation /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0050823 // peptide antigen stabilization // inferred from sequence or structural similarity","0000139 // Golgi membrane // inferred from direct assay /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030670 // phagocytic vesicle membrane // traceable author statement /// 0042824 // MHC class I peptide loading complex // non-traceable author statement /// 0042825 // TAP complex // inferred from direct assay /// 0071556 // integral to lumenal side of endoplasmic reticulum membrane // traceable author statement","0005515 // protein binding // inferred from physical interaction /// 0015433 // peptide antigen-transporting ATPase activity // traceable author statement /// 0042288 // MHC class I protein binding // traceable author statement /// 0042605 // peptide antigen binding // traceable author statement /// 0046978 // TAP1 binding // inferred from physical interaction /// 0046978 // TAP1 binding // traceable author statement /// 0046979 // TAP2 binding // inferred from physical interaction /// 0046979 // TAP2 binding // traceable author statement /// 0051082 // unfolded protein binding // traceable author statement","chr6:33271417-33281989 (-) // 90.61 // p21.32"]
["11754369_x_at",0.038702488,0.011687279,0.008756161,-0.06804609,-0.17399502,-0.008756161,0.464513,0.10397117,1.0742385,0.103314385,1.0742385,"up","UPRT",139596.0,"","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","","chrX:74493924-74524435 (+) // 98.5 // q13.3"]
["11731479_s_at",-0.10256386,-0.05124092,0.06346607,0.05093956,0.09599686,-0.05093956,0.7376686,0.3970555,-1.0439929,-0.06211187,1.0439929,"down","TXNDC9",10190.0,"0045454 // cell redox homeostasis // inferred from electronic annotation","","0005515 // protein binding // inferred from physical interaction","chr2:99935066-99957155 (-) // 78.26 // q11.2"]
["11747171_a_at",-0.06163931,-0.030697346,0.021368027,-0.0012168884,0.14494991,0.0012164116,0.63405454,0.25382075,-1.0511531,-0.071972765,1.0511531,"down","MIR4800 /// MXD4","100616358 /// 10608","0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // traceable author statement","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003714 // transcription corepressor activity // traceable author statement","chr4:2251190-2263823 (-) // 80.89 // p16.3"]
["11744678_a_at",-0.15094042,-0.031790733,5.8603287E-4,0.0,0.14595985,0.0,0.56289834,0.17796443,-1.0787559,-0.10936839,1.0787559,"down","C16orf62",57020.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr16:19590045-19712446 (+) // 96.68 // p12.3"]
["11748904_x_at",-0.15837002,0.05701828,-0.0010490417,0.0010490417,0.08959007,-0.14473629,0.9583906,0.87210053,-1.011223,-0.016101124,1.011223,"down","DBF4B",80174.0,"0007049 // cell cycle // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:42786218-42808790 (+) // 75.84 // q21.31"]
["11748986_a_at",0.17774963,0.014413834,-0.060739994,0.049008846,-0.014413834,-0.070560455,0.80687636,0.51603115,1.0394326,0.055796273,1.0394326,"up","SMAD7",4092.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0001657 // ureteric bud development // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0010719 // negative regulation of epithelial to mesenchymal transition // inferred by curator /// 0010719 // negative regulation of epithelial to mesenchymal transition // traceable author statement /// 0010801 // negative regulation of peptidyl-threonine phosphorylation // inferred from direct assay /// 0010944 // negative regulation of transcription by competitive promoter binding // inferred from direct assay /// 0017015 // regulation of transforming growth factor beta receptor signaling pathway // inferred by curator /// 0017015 // regulation of transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0022409 // positive regulation of cell-cell adhesion // inferred from direct assay /// 0030336 // negative regulation of cell migration // traceable author statement /// 0030509 // BMP signaling pathway // traceable author statement /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // inferred from direct assay /// 0030514 // negative regulation of BMP signaling pathway // inferred from direct assay /// 0030514 // negative regulation of BMP signaling pathway // inferred from electronic annotation /// 0031397 // negative regulation of protein ubiquitination // inferred from direct assay /// 0031398 // positive regulation of protein ubiquitination // inferred from direct assay /// 0032436 // positive regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0032925 // regulation of activin receptor signaling pathway // inferred from direct assay /// 0033137 // negative regulation of peptidyl-serine phosphorylation // inferred from direct assay /// 0034333 // adherens junction assembly // inferred from mutant phenotype /// 0034616 // response to laminar fluid shear stress // inferred from expression pattern /// 0034629 // cellular protein complex localization // inferred from direct assay /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0045768 // positive regulation of anti-apoptosis // traceable author statement /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0048844 // artery morphogenesis // inferred from sequence or structural similarity /// 0048844 // artery morphogenesis // inferred from electronic annotation /// 0050821 // protein stabilization // inferred from direct assay /// 0051444 // negative regulation of ubiquitin-protein ligase activity // inferred from direct assay /// 0055010 // ventricular cardiac muscle tissue morphogenesis // inferred from sequence or structural similarity /// 0055010 // ventricular cardiac muscle tissue morphogenesis // inferred from electronic annotation /// 0055117 // regulation of cardiac muscle contraction // inferred from sequence or structural similarity /// 0055117 // regulation of cardiac muscle contraction // inferred from electronic annotation /// 0060373 // regulation of ventricular cardiomyocyte membrane depolarization // inferred by curator /// 0060389 // pathway-restricted SMAD protein phosphorylation // inferred from sequence or structural similarity /// 0060389 // pathway-restricted SMAD protein phosphorylation // inferred from electronic annotation /// 0060394 // negative regulation of pathway-restricted SMAD protein phosphorylation // inferred from direct assay /// 0060394 // negative regulation of pathway-restricted SMAD protein phosphorylation // traceable author statement /// 0060412 // ventricular septum morphogenesis // inferred from sequence or structural similarity /// 0060412 // ventricular septum morphogenesis // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005913 // cell-cell adherens junction // inferred from direct assay /// 0016342 // catenin complex // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation","0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005518 // collagen binding // inferred from electronic annotation /// 0008013 // beta-catenin binding // inferred from physical interaction /// 0030617 // transforming growth factor beta receptor, inhibitory cytoplasmic mediator activity // inferred from direct assay /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0034713 // type I transforming growth factor beta receptor binding // inferred from physical interaction /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0048185 // activin binding // inferred from physical interaction /// 0070411 // I-SMAD binding // inferred from physical interaction","chr18:46447362-46475703 (-) // 95.1 // q21.1"]
["11752311_x_at",-0.064487934,-0.0035653114,0.01122427,-0.0064110756,0.0035653114,0.13571739,0.6593463,0.2854568,-1.0448049,-0.06323361,1.0448049,"down","CEP68",23177.0,"0051297 // centrosome organization // inferred from mutant phenotype","0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation","","chr2:65283549-65309811 (+) // 99.83 // p14"]
["11716858_a_at",0.008436203,-0.001288414,0.001288414,-0.048246384,0.021587372,-0.03684807,0.6959309,0.33354574,1.0167613,0.02398103,1.0167613,"up","MRPL51",51258.0,"0006412 // translation // inferred from sequence or structural similarity /// 0006412 // translation // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005761 // mitochondrial ribosome // inferred from direct assay /// 0005761 // mitochondrial ribosome // inferred from electronic annotation /// 0005762 // mitochondrial large ribosomal subunit // inferred from sequence or structural similarity /// 0005840 // ribosome // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003735 // structural constituent of ribosome // inferred from sequence or structural similarity /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr12:6600653-6602764 (-) // 86.06 // p13.31"]
["11730390_at",-0.084554195,-0.023270607,0.023271084,0.035431862,0.1543994,-0.04052496,0.667304,0.2949944,-1.0555196,-0.07795334,1.0555196,"down","SEMA3A",10371.0,"0002027 // regulation of heart rate // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007411 // axon guidance // inferred from electronic annotation /// 0007413 // axonal fasciculation // inferred from electronic annotation /// 0010633 // negative regulation of epithelial cell migration // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030517 // negative regulation of axon extension // inferred from electronic annotation /// 0048485 // sympathetic nervous system development // traceable author statement /// 0048841 // regulation of axon extension involved in axon guidance // inferred from direct assay /// 0048841 // regulation of axon extension involved in axon guidance // inferred from electronic annotation /// 0048843 // negative regulation of axon extension involved in axon guidance // inferred from electronic annotation /// 0048880 // sensory system development // traceable author statement /// 0050919 // negative chemotaxis // traceable author statement /// 0050919 // negative chemotaxis // inferred from electronic annotation /// 0060666 // dichotomous subdivision of terminal units involved in salivary gland branching // inferred from electronic annotation /// 0071526 // semaphorin-plexin signaling pathway // traceable author statement","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0045499 // chemorepellent activity // traceable author statement /// 0045499 // chemorepellent activity // inferred from electronic annotation","chr7:83587074-83824459 (-) // 97.23 // q21.11"]
["11755053_s_at",0.016590118,0.018956184,0.07356644,-0.048410416,-0.14855957,-0.016590118,0.40758198,0.07044805,1.0774027,0.1075576,1.0774027,"up","ELAC2",60528.0,"0008033 // tRNA processing // inferred from electronic annotation /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation","0004518 // nuclease activity // inferred from electronic annotation /// 0004519 // endonuclease activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:12895709-12921175 (-) // 98.99 // p12"]
["11737124_a_at",-0.08528328,-0.14253879,-0.062051058,0.062051296,0.28302526,0.20359159,0.23478083,0.015394975,-1.2137858,-0.2795138,1.2137858,"down","BET3L",1.00128327E8,"0006810 // transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation","","chr6:116817652-116866773 (-) // 98.22 // q22.1"]
["11718829_a_at",0.14938545,-0.065543175,-0.02148056,0.02148056,-0.08442497,0.038432598,0.9014703,0.72250813,1.0202749,0.028957888,1.0202749,"up","EHD1",10938.0,"0006184 // GTP catabolic process // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from mutant phenotype /// 0006897 // endocytosis // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0010886 // positive regulation of cholesterol storage // inferred from sequence or structural similarity /// 0010886 // positive regulation of cholesterol storage // inferred from electronic annotation /// 0016197 // endosomal transport // inferred from electronic annotation /// 0032456 // endocytic recycling // inferred from genetic interaction /// 0032456 // endocytic recycling // inferred from mutant phenotype /// 0034383 // low-density lipoprotein particle clearance // inferred from sequence or structural similarity /// 0034383 // low-density lipoprotein particle clearance // inferred from electronic annotation /// 0042632 // cholesterol homeostasis // inferred from sequence or structural similarity /// 0042632 // cholesterol homeostasis // inferred from electronic annotation /// 0051260 // protein homooligomerization // inferred from physical interaction","0005622 // intracellular // inferred from mutant phenotype /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0005811 // lipid particle // inferred from sequence or structural similarity /// 0005811 // lipid particle // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0010008 // endosome membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030139 // endocytic vesicle // inferred from electronic annotation /// 0031095 // platelet dense tubular network membrane // inferred from sequence or structural similarity /// 0031095 // platelet dense tubular network membrane // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from direct assay /// 0031901 // early endosome membrane // inferred from electronic annotation /// 0055038 // recycling endosome membrane // inferred from direct assay /// 0055038 // recycling endosome membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation","chr11:64620202-64646230 (-) // 96.8 // q13.1"]
["11759085_s_at",-0.0019669533,-0.01443243,0.14128542,0.028267384,0.00196743,-0.0441494,0.765359,0.4418507,1.0325896,0.04626691,1.0325896,"up","KIAA1715",80856.0,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0007596 // blood coagulation // inferred from electronic annotation /// 0035115 // embryonic forelimb morphogenesis // inferred from electronic annotation /// 0042733 // embryonic digit morphogenesis // inferred from electronic annotation /// 0060173 // limb development // non-traceable author statement","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","","chr2:176788482-176867073 (-) // 65.74 // q31.1"]
["11759874_x_at",0.01359725,-0.09213853,-0.040792942,0.015878916,0.072582245,-0.013597488,0.56278706,0.1778149,-1.045891,-0.06473257,1.045891,"down","FAM175A",84142.0,"0006281 // DNA repair // inferred from electronic annotation /// 0006302 // double-strand break repair // inferred from mutant phenotype /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0010212 // response to ionizing radiation // inferred from mutant phenotype /// 0016568 // chromatin modification // inferred from electronic annotation /// 0031572 // G2/M transition DNA damage checkpoint // inferred from mutant phenotype /// 0045739 // positive regulation of DNA repair // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0070531 // BRCA1-A complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0031593 // polyubiquitin binding // inferred from direct assay","chr4:84399964-84406218 (-) // 25.0 // q21.23"]
["11737287_at",0.024959087,-0.025096655,0.07516432,-0.024959087,-0.1674664,0.14921069,0.8928731,0.7025336,1.0276963,0.03941392,1.0276963,"up","GALR1",2587.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007189 // adenylate cyclase-activating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007194 // negative regulation of adenylate cyclase activity // traceable author statement /// 0007218 // neuropeptide signaling pathway // traceable author statement /// 0007586 // digestion // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004966 // galanin receptor activity // inferred from electronic annotation /// 0004966 // galanin receptor activity // traceable author statement /// 0042923 // neuropeptide binding // inferred from electronic annotation","chr18:74962007-74982094 (+) // 99.82 // q23"]
["11717784_a_at",0.025967598,0.043161392,0.13781643,-0.025967598,-0.032492638,-0.05912018,0.3350254,0.0404784,1.077864,0.108175226,1.077864,"up","THYN1",29087.0,"","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay","","chr11:134118172-134123263 (-) // 96.05 // q25"]
["11743954_a_at",-0.044714928,-0.02447939,0.0783968,-0.039022923,0.02447939,0.057307243,0.94230884,0.82521963,-1.0077845,-0.011187152,1.0077845,"down","EHBP1L1",254102.0,"","","","chr11:65343506-65360116 (+) // 98.22 // q13.1"]
["11722047_a_at",0.09089422,-0.27378988,-0.016957283,0.060853004,0.009454727,-0.009454727,0.78569376,0.47440666,-1.062087,-0.08690203,1.062087,"down","C2orf43",60526.0,"","","","chr2:20884577-21022883 (-) // 97.76 // p24.1"]
["11742096_x_at",0.14169645,0.17573357,-0.010548592,-0.01405859,0.010548115,-0.08326769,0.473401,0.108797416,1.0952194,0.13121986,1.0952194,"up","SCLY /// UBE2F-SCLY","100533179 /// 51540","0006520 // cellular amino acid metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0003824 // catalytic activity // inferred from electronic annotation /// 0009000 // selenocysteine lyase activity // inferred from electronic annotation /// 0009000 // selenocysteine lyase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation","chr2:238969631-239008053 (+) // 99.27 // q37.3"]
["11752175_x_at",0.097911835,-0.0064554214,0.04547119,-0.025131226,0.0064554214,-0.04645729,0.4871007,0.11726435,1.0477929,0.067353606,1.0477929,"up","DBF4",10926.0,"0000075 // cell cycle checkpoint // traceable author statement /// 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000216 // M/G1 transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006260 // DNA replication // traceable author statement /// 0006260 // DNA replication // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0043085 // positive regulation of catalytic activity // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008047 // enzyme activator activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:87505543-87537691 (+) // 93.27 // q21.12"]
["11750477_s_at",-0.039310932,-0.09863043,-0.13318968,0.039310455,0.13907433,0.05344248,0.2359144,0.015615677,-1.1232295,-0.16765274,1.1232295,"down","THEM6",51337.0,"","0005576 // extracellular region // inferred from electronic annotation","","chr8:143808687-143818343 (+) // 89.53 // q24.3"]
["11719939_a_at",0.025486946,-0.008485794,0.07555771,-0.012025833,-0.03612709,0.008485794,0.5716299,0.18557905,1.0310222,0.044075385,1.0310222,"up","CAND1",55832.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from direct assay /// 0030154 // cell differentiation // inferred from direct assay /// 0043086 // negative regulation of catalytic activity // inferred from direct assay /// 0045899 // positive regulation of RNA polymerase II transcriptional preinitiation complex assembly // inferred from electronic annotation","0000151 // ubiquitin ligase complex // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0017025 // TBP-class protein binding // inferred from electronic annotation","chr12:67663060-67708688 (+) // 96.57 // q14.3"]
["11727452_x_at",-0.026351929,-0.104123116,-0.029062271,0.12330437,0.04732132,0.026351929,0.326936,0.03797872,-1.0858601,-0.11883828,1.0858601,"down","FAM21A /// FAM21C","253725 /// 387680","0006810 // transport // inferred from electronic annotation /// 0042147 // retrograde transport, endosome to Golgi // inferred from sequence or structural similarity /// 0042147 // retrograde transport, endosome to Golgi // inferred from mutant phenotype","0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from sequence or structural similarity /// 0005769 // early endosome // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from electronic annotation /// 0071203 // WASH complex // inferred from sequence or structural similarity /// 0071203 // WASH complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr10:46222579-46288412 (+) // 97.82 // q11.22 /// chr10:51827579-51893269 (+) // 97.04 // q11.23"]
["11716681_at",0.23589373,0.16851711,-0.018036366,-0.009066582,-0.24140358,0.009066582,0.50637823,0.13188694,1.1560946,0.20925939,1.1560946,"up","SLC39A9",55334.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006829 // zinc ion transport // inferred from electronic annotation /// 0030001 // metal ion transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0046873 // metal ion transmembrane transporter activity // inferred from electronic annotation","chr14:69865074-69929107 (+) // 97.91 // q24.1"]
["11744449_a_at",0.25083113,-0.06141424,0.00481987,0.0076003075,-0.00481987,-0.06230402,0.760783,0.43413687,1.060384,0.08458685,1.060384,"up","ARHGAP4",393.0,"0006915 // apoptotic process // traceable author statement /// 0007010 // cytoskeleton organization // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007266 // Rho protein signal transduction // traceable author statement /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0032321 // positive regulation of Rho GTPase activity // traceable author statement /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005925 // focal adhesion // inferred from direct assay","0005070 // SH3/SH2 adaptor activity // traceable author statement /// 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005100 // Rho GTPase activator activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chrX:153172829-153191714 (-) // 98.25 // q28"]
["11728512_a_at",0.0029726028,-0.023513794,0.027197838,0.014149666,-0.013081551,-0.0029726028,0.95844036,0.87232304,1.00198,0.0028536357,1.00198,"up","TRAF5",7188.0,"0006915 // apoptotic process // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from expression pattern /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from mutant phenotype /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from mutant phenotype","0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0009898 // internal side of plasma membrane // inferred from sequence or structural similarity /// 0035631 // CD40 receptor complex // inferred from sequence or structural similarity","0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0031996 // thioesterase binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:211519447-211548375 (+) // 83.83 // q32.3"]
["11755415_a_at",0.01524353,0.076592445,0.002254486,-0.032701492,-0.087924,-0.002254486,0.45867568,0.100333855,1.0514086,0.07232351,1.0514086,"up","EIF2B4",8890.0,"0001541 // ovarian follicle development // inferred from mutant phenotype /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred from direct assay /// 0006413 // translational initiation // traceable author statement /// 0006413 // translational initiation // inferred from electronic annotation /// 0006417 // regulation of translation // non-traceable author statement /// 0006446 // regulation of translational initiation // not recorded /// 0009408 // response to heat // inferred from sequence or structural similarity /// 0009408 // response to heat // traceable author statement /// 0009749 // response to glucose stimulus // inferred from sequence or structural similarity /// 0010467 // gene expression // traceable author statement /// 0014003 // oligodendrocyte development // inferred from mutant phenotype /// 0019509 // L-methionine salvage from methylthioadenosine // not recorded /// 0032057 // negative regulation of translational initiation in response to stress // inferred from sequence or structural similarity /// 0042552 // myelination // inferred from mutant phenotype /// 0043434 // response to peptide hormone stimulus // inferred from sequence or structural similarity /// 0044237 // cellular metabolic process // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045947 // negative regulation of translational initiation // not recorded /// 0051716 // cellular response to stimulus // inferred from direct assay","0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005851 // eukaryotic translation initiation factor 2B complex // inferred from direct assay","0003743 // translation initiation factor activity // inferred from direct assay /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from direct assay /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0031369 // translation initiation factor binding // inferred from sequence or structural similarity /// 0046523 // S-methyl-5-thioribose-1-phosphate isomerase activity // not recorded","chr2:27587229-27593178 (-) // 96.88 // p23.3"]
["11728346_a_at",-0.17879915,0.27539587,-0.10980463,-0.020944834,0.03602457,0.020944834,0.9727915,0.913765,-1.01144,-0.016410794,1.01144,"down","PRMT8",56341.0,"0006479 // protein methylation // inferred from electronic annotation /// 0016571 // histone methylation // inferred from direct assay /// 0018216 // peptidyl-arginine methylation // inferred from direct assay /// 0019919 // peptidyl-arginine methylation, to asymmetrical-dimethyl arginine // inferred from direct assay /// 0032259 // methylation // inferred from electronic annotation /// 0034969 // histone arginine methylation // inferred from direct assay /// 0043393 // regulation of protein binding // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008276 // protein methyltransferase activity // inferred from electronic annotation /// 0008469 // histone-arginine N-methyltransferase activity // inferred from direct assay /// 0008757 // S-adenosylmethionine-dependent methyltransferase activity // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation /// 0035241 // protein-arginine omega-N monomethyltransferase activity // inferred from direct assay /// 0035242 // protein-arginine omega-N asymmetric methyltransferase activity // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from direct assay","chr12:3599849-3703136 (+) // 95.47 // p13.32"]
["11721991_a_at",-0.019921303,0.073721886,-0.10974836,0.074804306,0.019921303,-0.09389019,0.9359113,0.807234,-1.0132061,-0.018927703,1.0132061,"down","SLC6A6",6533.0,"0006520 // cellular amino acid metabolic process // traceable author statement /// 0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006836 // neurotransmitter transport // inferred from electronic annotation /// 0006865 // amino acid transport // traceable author statement /// 0015734 // taurine transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0005328 // neurotransmitter:sodium symporter activity // inferred from electronic annotation /// 0005368 // taurine transmembrane transporter activity // inferred from electronic annotation /// 0005369 // taurine:sodium symporter activity // inferred from electronic annotation /// 0005369 // taurine:sodium symporter activity // traceable author statement /// 0015293 // symporter activity // inferred from electronic annotation /// 0030977 // taurine binding // inferred from electronic annotation","chr3:14444108-14530857 (+) // 94.05 // p25.1"]
["11727317_at",0.005546093,-0.027447224,-0.005546093,0.052832603,-0.026939392,0.06105423,0.6450882,0.26834634,-1.0267832,-0.038131636,1.0267832,"down","KCNE1L",23630.0,"0008016 // regulation of heart contraction // traceable author statement","0008076 // voltage-gated potassium channel complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation","chrX:108866928-108868397 (-) // 97.61 // q23"]
["11763094_at",0.08350706,0.052218437,-0.18335724,-0.101135254,-0.005572796,0.005572796,0.9513713,0.8538272,1.0124387,0.017834496,1.0124387,"up",-0.101135254,-0.005572796,0.005572796,0.08350706,0.052218437,-0.18335724]
["11718380_s_at",-0.035137177,-0.041555405,0.058348656,-0.0700016,0.12608433,0.035137177,0.8503646,0.60530907,-1.0256377,-0.036521263,1.0256377,"down","DGKZ",8525.0,"0007205 // protein kinase C-activating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016477 // cell migration // non-traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0031571 // mitotic cell cycle G1/S transition DNA damage checkpoint // inferred from genetic interaction /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0043086 // negative regulation of catalytic activity // inferred from electronic annotation /// 0045930 // negative regulation of mitotic cell cycle // inferred from genetic interaction /// 0046580 // negative regulation of Ras protein signal transduction // inferred from electronic annotation /// 0046834 // lipid phosphorylation // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0001727 // lipid kinase activity // inferred from direct assay /// 0004143 // diacylglycerol kinase activity // inferred from direct assay /// 0004143 // diacylglycerol kinase activity // inferred from electronic annotation /// 0004857 // enzyme inhibitor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005524 // ATP binding // traceable author statement /// 0008022 // protein C-terminus binding // inferred from direct assay /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:46383144-46402101 (+) // 98.89 // p11.2"]
["11724000_a_at",-8.177757E-4,8.177757E-4,-0.0085783005,0.03051281,0.006729126,-0.05493498,0.97201985,0.9113393,1.0021082,0.0030383116,1.0021082,"up","ZNF581",51545.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:56154912-56156989 (+) // 97.45 // q13.42"]
["11724775_at",0.1591816,-0.06634331,-0.09142542,0.004593849,-0.004593849,0.0056877136,0.9959061,0.9866004,-1.0009882,-0.0014250322,1.0009882,"down","FDX1",2230.0,"0006091 // generation of precursor metabolites and energy // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0022900 // electron transport chain // inferred from electronic annotation /// 0030325 // adrenal gland development // inferred from electronic annotation /// 0034698 // response to gonadotropin stimulus // inferred from electronic annotation /// 0044320 // cellular response to leptin stimulus // inferred from electronic annotation /// 0044321 // response to leptin stimulus // inferred from electronic annotation /// 0050790 // regulation of catalytic activity // inferred from electronic annotation /// 0051353 // positive regulation of oxidoreductase activity // inferred from electronic annotation /// 0070995 // NADPH oxidation // inferred from electronic annotation /// 0071407 // cellular response to organic cyclic compound // inferred from electronic annotation /// 0071872 // cellular response to epinephrine stimulus // inferred from electronic annotation","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005739 // mitochondrion // traceable author statement /// 0005759 // mitochondrial matrix // inferred from electronic annotation /// 0030061 // mitochondrial crista // inferred from electronic annotation","0005506 // iron ion binding // inferred from electronic annotation /// 0005506 // iron ion binding // traceable author statement /// 0008386 // cholesterol monooxygenase (side-chain-cleaving) activity // inferred from electronic annotation /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0009055 // electron carrier activity // traceable author statement /// 0015039 // NADPH-adrenodoxin reductase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation /// 0051537 // 2 iron, 2 sulfur cluster binding // inferred from electronic annotation","chr11:110300223-110335605 (+) // 71.23 // q22.3"]
["11750084_a_at",0.087887764,0.0,0.31580806,0.0,-0.021443844,-0.0949502,0.53507906,0.15289058,1.1276844,0.1733633,1.1276844,"up","FAM69A",388650.0,"","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr1:93298452-93427057 (-) // 87.64 // p22.1"]
["11761456_at",-0.07471514,0.017809391,-0.09874344,0.15593195,-0.017809391,0.23053598,0.45682687,0.09918345,-1.1287838,-0.17476921,1.1287838,"down","AKAP13",11214.0,"0006915 // apoptotic process // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005624 // membrane fraction // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0004691 // cAMP-dependent protein kinase activity // non-traceable author statement /// 0004871 // signal transducer activity // traceable author statement /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr15:85923870-86079988 (+) // 58.47 // q25.3"]
["11752892_x_at",0.06757069,0.076375484,-2.374649E-4,-0.0301795,2.374649E-4,-0.11937761,0.43653503,0.08703996,1.0700485,0.09767612,1.0700485,"up","LILRA2",11027.0,"0006952 // defense response // traceable author statement /// 0007165 // signal transduction // traceable author statement","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003823 // antigen binding // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0004872 // receptor activity // traceable author statement","chr19:55085307-55098862 (+) // 99.86 // q13.42"]
["11757210_x_at",-0.019389153,0.017112255,0.13106298,-0.053602695,0.025647163,-0.017112255,0.6839485,0.31736207,1.0409864,0.057951245,1.0409864,"up","ASMTL-AS1",80161.0,"","","","chrX:1520354-1534314 (+) // 58.47 // p22.33 /// chrY:1470354-1484314 (+) // 58.47 // p11.32"]
["11727473_at",0.16703868,0.024345636,-0.11917734,-0.20390081,0.09416747,-0.024345875,0.84595644,0.5964939,1.0488163,0.06876204,1.0488163,"up","CLC",1178.0,"0007275 // multicellular organismal development // traceable author statement /// 0016042 // lipid catabolic process // inferred from electronic annotation","","0004091 // carboxylesterase activity // inferred from electronic annotation /// 0004622 // lysophospholipase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr19:40221894-40228669 (-) // 92.12 // q13.2"]
["11762558_at",-0.07542896,0.22168875,0.13559294,-0.024999142,0.024999142,-0.06371117,0.6532885,0.2784145,1.0831162,0.115187995,1.0831162,"up","C10orf53",282966.0,"","","","chr10:50887731-50918307 (+) // 58.0 // q11.23"]
["11720816_a_at",-0.09229326,-0.04809761,0.061463356,-0.067811966,0.23667192,0.04809761,0.7253871,0.37899834,-1.070755,-0.09862842,1.070755,"down","BAALC",79870.0,"","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation","","chr8:104152602-104242700 (+) // 89.78 // q22.3"]
["11725164_at",0.08945608,-0.10166478,0.08229661,0.0107162,-0.0107162,-0.0107162,0.8878475,0.6907937,1.0188451,0.026934702,1.0188451,"up","C7orf31",136895.0,"","","","chr7:25174306-25219919 (-) // 80.14 // p15.3"]
["11718189_at",-0.025246143,-0.0071554184,0.07792902,-0.12841606,0.15579605,0.0071554184,0.99051166,0.96879166,1.002543,0.003664077,1.002543,"up","FOXJ2",55810.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007389 // pattern specification process // not recorded /// 0009790 // embryo development // not recorded /// 0009888 // tissue development // not recorded /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0048513 // organ development // not recorded /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // not recorded","0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // not recorded /// 0005730 // nucleolus // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // not recorded /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // not recorded /// 0008134 // transcription factor binding // not recorded /// 0008301 // DNA binding, bending // not recorded /// 0019904 // protein domain specific binding // not recorded /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr12:8185189-8208113 (+) // 92.87 // p13.31"]
["11733089_at",-0.043533325,-0.04502678,0.074175835,-0.0038366318,0.007945061,0.0038366318,0.9542702,0.86019325,-1.0051725,-0.007443094,1.0051725,"down","ZNF277",11179.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:111846642-111983989 (+) // 81.29 // q31.1"]
["11717238_a_at",0.023285866,-0.015670776,0.015670776,0.038658142,-0.055315018,-0.0674324,0.72100204,0.37139195,1.0251192,0.035791654,1.0251192,"up","AMD1",262.0,"0006557 // S-adenosylmethioninamine biosynthetic process // inferred from electronic annotation /// 0006595 // polyamine metabolic process // traceable author statement /// 0006596 // polyamine biosynthetic process // inferred from electronic annotation /// 0006597 // spermine biosynthetic process // inferred from electronic annotation /// 0006597 // spermine biosynthetic process // non-traceable author statement /// 0008295 // spermidine biosynthetic process // inferred from electronic annotation /// 0008295 // spermidine biosynthetic process // non-traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005829 // cytosol // traceable author statement","0004014 // adenosylmethionine decarboxylase activity // inferred from electronic annotation /// 0004014 // adenosylmethionine decarboxylase activity // traceable author statement /// 0016829 // lyase activity // inferred from electronic annotation /// 0016831 // carboxy-lyase activity // inferred from electronic annotation","chr6:111195987-111217547 (+) // 91.68 // q21"]
["11733110_s_at",-0.027896881,-0.056084633,0.020853043,-0.020853043,0.058997154,0.02813816,0.63309854,0.25305998,-1.0303518,-0.04313695,1.0303518,"down","TLK1",9874.0,"0001672 // regulation of chromatin assembly or disassembly // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006468 // protein phosphorylation // non-traceable author statement /// 0006886 // intracellular protein transport // inferred from direct assay /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // non-traceable author statement /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0005524 // ATP binding // non-traceable author statement /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr2:171847332-172017450 (-) // 94.05 // q31.1"]
["11731197_a_at",-0.05332184,0.08684635,0.05332184,0.11309147,-0.07412481,-0.11055088,0.8243878,0.55068564,1.0372834,0.05281014,1.0372834,"up","PRR5L",79899.0,"","0005739 // mitochondrion // inferred from electronic annotation","","chr11:36397534-36486753 (+) // 99.5 // p13"]
["11743478_a_at",0.0034332275,0.011754036,0.008775711,-0.07178211,-0.0034332275,-0.05750084,0.40159136,0.06733434,1.0368638,0.052226402,1.0368638,"up","FYTTD1",84248.0,"0006406 // mRNA export from nucleus // inferred from mutant phenotype /// 0006810 // transport // inferred from electronic annotation /// 0051028 // mRNA transport // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0003729 // mRNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction","chr3:197476682-197511173 (+) // 92.03 // q29"]
["11723816_at",-0.017767906,0.03668332,-0.20578694,0.017767906,0.16920185,-0.1525631,0.8322647,0.56724876,-1.0524557,-0.07375946,1.0524557,"down","ARHGAP29",9411.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007266 // Rho protein signal transduction // traceable author statement /// 0032321 // positive regulation of Rho GTPase activity // traceable author statement /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005100 // Rho GTPase activator activity // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:94633943-94703302 (-) // 75.11 // p22.1"]
["11742946_s_at",0.009902954,-0.012174606,0.04046917,-0.0066108704,0.0066108704,-0.06307125,0.6450063,0.2679854,1.0236739,0.033756193,1.0236739,"up","UBE2E3",10477.0,"0016567 // protein ubiquitination // inferred from electronic annotation /// 0040008 // regulation of growth // inferred from electronic annotation /// 0070534 // protein K63-linked ubiquitination // inferred from direct assay /// 0070936 // protein K48-linked ubiquitination // inferred from direct assay /// 0070979 // protein K11-linked ubiquitination // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation","chr2:181845329-181928361 (+) // 97.34 // q31.3"]
["11722096_a_at",0.0117640495,-0.0117640495,-0.17120504,-0.10598278,0.013877869,0.012288094,0.8858506,0.68523663,-1.0213397,-0.030462725,1.0213397,"down","EIF4ENIF1",56478.0,"0006413 // translational initiation // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0003743 // translation initiation factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008565 // protein transporter activity // traceable author statement","chr22:31835348-31885573 (-) // 94.8 // q12.2"]
["11761546_a_at",-0.042919636,-0.19718552,0.11392474,-0.11845994,0.042919397,0.17809987,0.8347612,0.5723376,-1.0542716,-0.07624655,1.0542716,"down","HDGFL1",154150.0,"","","","chr6:22569770-22571161 (+) // 92.97 // p22.3"]
["11726023_a_at",-0.025157928,0.059045315,0.09289074,-0.014521122,-0.03658676,0.014521599,0.61215717,0.22602835,1.0384666,0.054454777,1.0384666,"up","EDN1",1906.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0001501 // skeletal system development // inferred from electronic annotation /// 0001516 // prostaglandin biosynthetic process // inferred from direct assay /// 0001569 // patterning of blood vessels // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001821 // histamine secretion // inferred from electronic annotation /// 0003100 // regulation of systemic arterial blood pressure by endothelin // inferred from direct assay /// 0006885 // regulation of pH // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from direct assay /// 0007186 // G-protein coupled receptor signaling pathway // inferred from direct assay /// 0007204 // elevation of cytosolic calcium ion concentration // inferred from direct assay /// 0007204 // elevation of cytosolic calcium ion concentration // inferred from electronic annotation /// 0007205 // protein kinase C-activating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007243 // intracellular protein kinase cascade // inferred from electronic annotation /// 0007267 // cell-cell signaling // inferred from direct assay /// 0007507 // heart development // inferred from electronic annotation /// 0007585 // respiratory gaseous exchange // inferred from electronic annotation /// 0007589 // body fluid secretion // inferred from electronic annotation /// 0008217 // regulation of blood pressure // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0009953 // dorsal/ventral pattern formation // inferred from electronic annotation /// 0010259 // multicellular organismal aging // inferred from electronic annotation /// 0010460 // positive regulation of heart rate // inferred from direct assay /// 0010595 // positive regulation of endothelial cell migration // traceable author statement /// 0010613 // positive regulation of cardiac muscle hypertrophy // inferred from direct assay /// 0010870 // positive regulation of receptor biosynthetic process // inferred from direct assay /// 0014032 // neural crest cell development // inferred from electronic annotation /// 0014065 // phosphatidylinositol 3-kinase cascade // inferred from direct assay /// 0014824 // artery smooth muscle contraction // inferred from direct assay /// 0014824 // artery smooth muscle contraction // traceable author statement /// 0014826 // vein smooth muscle contraction // inferred from direct assay /// 0015758 // glucose transport // inferred from electronic annotation /// 0016049 // cell growth // inferred from electronic annotation /// 0019229 // regulation of vasoconstriction // inferred from electronic annotation /// 0019233 // sensory perception of pain // inferred from electronic annotation /// 0019722 // calcium-mediated signaling // inferred from direct assay /// 0030072 // peptide hormone secretion // inferred from direct assay /// 0030185 // nitric oxide transport // inferred from direct assay /// 0030195 // negative regulation of blood coagulation // traceable author statement /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0030593 // neutrophil chemotaxis // inferred from direct assay /// 0030818 // negative regulation of cAMP biosynthetic process // inferred from electronic annotation /// 0031583 // phospholipase D-activating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0032269 // negative regulation of cellular protein metabolic process // inferred from direct assay /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0033574 // response to testosterone stimulus // inferred from electronic annotation /// 0034392 // negative regulation of smooth muscle cell apoptotic process // inferred from electronic annotation /// 0035094 // response to nicotine // inferred from electronic annotation /// 0035810 // positive regulation of urine volume // inferred from electronic annotation /// 0035815 // positive regulation of renal sodium excretion // inferred from electronic annotation /// 0042045 // epithelial fluid transport // inferred from electronic annotation /// 0042310 // vasoconstriction // inferred from direct assay /// 0042310 // vasoconstriction // inferred from electronic annotation /// 0042313 // protein kinase C deactivation // inferred from direct assay /// 0042474 // middle ear morphogenesis // inferred from electronic annotation /// 0042482 // positive regulation of odontogenesis // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042554 // superoxide anion generation // inferred from electronic annotation /// 0043179 // rhythmic excitation // inferred from electronic annotation /// 0043200 // response to amino acid stimulus // inferred from electronic annotation /// 0043406 // positive regulation of MAP kinase activity // inferred from direct assay /// 0043507 // positive regulation of JUN kinase activity // inferred from direct assay /// 0045321 // leukocyte activation // traceable author statement /// 0045429 // positive regulation of nitric oxide biosynthetic process // traceable author statement /// 0045793 // positive regulation of cell size // inferred from direct assay /// 0045840 // positive regulation of mitosis // inferred from direct assay /// 0045987 // positive regulation of smooth muscle contraction // inferred from electronic annotation /// 0046887 // positive regulation of hormone secretion // inferred from direct assay /// 0046888 // negative regulation of hormone secretion // inferred from electronic annotation /// 0048016 // inositol phosphate-mediated signaling // inferred from direct assay /// 0048514 // blood vessel morphogenesis // inferred from electronic annotation /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from direct assay /// 0050880 // regulation of blood vessel size // inferred from electronic annotation /// 0051216 // cartilage development // inferred from electronic annotation /// 0051482 // elevation of cytosolic calcium ion concentration involved in phospholipase C-activating G-protein coupled signaling pathway // inferred from electronic annotation /// 0051771 // negative regulation of nitric-oxide synthase biosynthetic process // inferred from direct assay /// 0051899 // membrane depolarization // inferred from electronic annotation /// 0051930 // regulation of sensory perception of pain // inferred from electronic annotation /// 0060137 // maternal process involved in parturition // inferred from electronic annotation /// 0060298 // positive regulation of sarcomere organization // inferred from mutant phenotype /// 0060585 // positive regulation of prostaglandin-endoperoxide synthase activity // inferred from mutant phenotype /// 0070101 // positive regulation of chemokine-mediated signaling pathway // inferred by curator /// 0071347 // cellular response to interleukin-1 // inferred from electronic annotation /// 0071356 // cellular response to tumor necrosis factor // inferred from electronic annotation /// 0090023 // positive regulation of neutrophil chemotaxis // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay","0005102 // receptor binding // inferred from electronic annotation /// 0005125 // cytokine activity // inferred from direct assay /// 0005179 // hormone activity // inferred from direct assay /// 0031707 // endothelin A receptor binding // inferred from direct assay /// 0031707 // endothelin A receptor binding // inferred from electronic annotation /// 0031708 // endothelin B receptor binding // inferred from direct assay /// 0031708 // endothelin B receptor binding // inferred from electronic annotation","chr6:12290311-12297426 (+) // 98.8 // p24.1"]
["11748650_a_at",0.12306595,0.051642895,-0.16286612,-0.15128231,-0.051642895,0.05905819,0.8691254,0.6476804,1.0366316,0.051903255,1.0366316,"up","ADAM33",80332.0,"0006508 // proteolysis // inferred from electronic annotation /// 0006508 // proteolysis // non-traceable author statement /// 0007229 // integrin-mediated signaling pathway // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0004222 // metalloendopeptidase activity // non-traceable author statement /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008270 // zinc ion binding // non-traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr20:3649228-3662698 (-) // 98.61 // p13"]
["11752491_x_at",-0.14845419,0.07541418,-0.1838975,0.11274004,-0.07541418,0.3201251,0.6048411,0.21770206,-1.1525235,-0.20479618,1.1525235,"down","TOM1",10043.0,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006897 // endocytosis // non-traceable author statement /// 0015031 // protein transport // non-traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016197 // endosomal transport // non-traceable author statement /// 0016197 // endosomal transport // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005764 // lysosome // traceable author statement /// 0005768 // endosome // traceable author statement /// 0005769 // early endosome // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr22:35695886-35743621 (+) // 98.88 // q12.3"]
["11720861_a_at",0.0056200027,-0.0056200027,-0.03683424,0.1889286,-0.067742825,0.044392586,0.75347364,0.42127654,-1.047878,-0.0674708,1.047878,"down","ARHGEF3",50650.0,"0006915 // apoptotic process // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007266 // Rho protein signal transduction // traceable author statement /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // inferred from direct assay /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // traceable author statement /// 0005543 // phospholipid binding // inferred from electronic annotation","chr3:56761447-56809839 (-) // 98.37 // p14.3"]
["11715843_at",0.084959984,0.030147552,0.063643456,-0.11628246,-0.030147552,-0.057016373,0.22051114,0.013240936,1.0923227,0.12739913,1.0923227,"up","MAPK1",5594.0,"0000165 // MAPK cascade // traceable author statement /// 0000165 // MAPK cascade // inferred from electronic annotation /// 0000186 // activation of MAPKK activity // traceable author statement /// 0000187 // activation of MAPK activity // traceable author statement /// 0000189 // MAPK import into nucleus // inferred from electronic annotation /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // traceable author statement /// 0006935 // chemotaxis // traceable author statement /// 0006950 // response to stress // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007265 // Ras protein signal transduction // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008063 // Toll signaling pathway // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0009636 // response to toxin // inferred from electronic annotation /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0010800 // positive regulation of peptidyl-threonine phosphorylation // inferred from direct assay /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from direct assay /// 0019233 // sensory perception of pain // inferred from electronic annotation /// 0019858 // cytosine metabolic process // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0031663 // lipopolysaccharide-mediated signaling pathway // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0032872 // regulation of stress-activated MAPK cascade // traceable author statement /// 0033598 // mammary gland epithelial cell proliferation // inferred from electronic annotation /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0042221 // response to chemical stimulus // inferred from electronic annotation /// 0043330 // response to exogenous dsRNA // inferred from electronic annotation /// 0043627 // response to estrogen stimulus // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045596 // negative regulation of cell differentiation // inferred from electronic annotation /// 0045727 // positive regulation of translation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0050852 // T cell receptor signaling pathway // inferred from electronic annotation /// 0050853 // B cell receptor signaling pathway // inferred from electronic annotation /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // traceable author statement /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0051493 // regulation of cytoskeleton organization // traceable author statement /// 0060397 // JAK-STAT cascade involved in growth hormone signaling pathway // traceable author statement /// 0060716 // labyrinthine layer blood vessel development // inferred from electronic annotation /// 0070371 // ERK1 and ERK2 cascade // inferred from direct assay /// 0070371 // ERK1 and ERK2 cascade // traceable author statement /// 0072584 // caveolin-mediated endocytosis // traceable author statement /// 0090170 // regulation of Golgi inheritance // traceable author statement /// 2000641 // regulation of early endosome to late endosome transport // traceable author statement","0005625 // soluble fraction // inferred from electronic annotation /// 0005626 // insoluble fraction // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005769 // early endosome // traceable author statement /// 0005770 // late endosome // traceable author statement /// 0005794 // Golgi apparatus // traceable author statement /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005856 // cytoskeleton // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005901 // caveola // traceable author statement /// 0005925 // focal adhesion // traceable author statement /// 0031143 // pseudopodium // inferred from electronic annotation /// 0032839 // dendrite cytoplasm // inferred from electronic annotation /// 0033267 // axon part // inferred from electronic annotation /// 0043204 // perikaryon // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0001784 // phosphotyrosine binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004707 // MAP kinase activity // inferred from electronic annotation /// 0004707 // MAP kinase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0008353 // RNA polymerase II carboxy-terminal domain kinase activity // inferred from sequence or structural similarity /// 0008353 // RNA polymerase II carboxy-terminal domain kinase activity // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019902 // phosphatase binding // inferred from physical interaction /// 0031435 // mitogen-activated protein kinase kinase kinase binding // inferred from electronic annotation","chr22:22108791-22221970 (-) // 87.22 // q11.21"]
["11742846_a_at",0.042720795,-0.026545525,-0.03083992,0.0020542145,0.021839142,-0.0020542145,0.87047976,0.6513137,-1.0084698,-0.012167909,1.0084698,"down","CUL4B",8450.0,"0006281 // DNA repair // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007049 // cell cycle // non-traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0031461 // cullin-RING ubiquitin ligase complex // inferred from electronic annotation /// 0031465 // Cul4B-RING ubiquitin ligase complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from electronic annotation","chrX:119658443-119709684 (-) // 98.51 // q24"]
["11717525_s_at",0.010844231,-0.010844231,0.106728554,-0.016991615,0.032492638,-0.033293724,0.72052205,0.3705437,1.0291884,0.041507095,1.0291884,"up","RDX",5962.0,"0030033 // microvillus assembly // inferred from electronic annotation /// 0045176 // apical protein localization // inferred from electronic annotation /// 0051693 // actin filament capping // inferred from electronic annotation","0001726 // ruffle // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005902 // microvillus // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0019898 // extrinsic to membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030175 // filopodium // inferred from electronic annotation /// 0032154 // cleavage furrow // inferred from electronic annotation /// 0032420 // stereocilium // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008092 // cytoskeletal protein binding // inferred from electronic annotation","chr11:110100174-110167701 (-) // 92.23 // q22.3"]
["11733842_a_at",0.06218338,0.030903816,0.05943775,-0.06277275,-0.13998508,-0.030903816,0.2534453,0.019133465,1.0933299,0.12872879,1.0933299,"up","SSSCA1",10534.0,"0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0007067 // mitosis // traceable author statement /// 0051301 // cell division // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation","0016787 // hydrolase activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from electronic annotation","chr11:65337900-65340276 (+) // 85.26 // q13.1"]
["11716546_s_at",0.004166603,-0.023132324,-0.0073747635,0.041321754,-0.004166603,0.019219398,0.5267349,0.14652932,-1.019295,-0.027571619,1.019295,"down","DRAP1",10589.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003714 // transcription corepressor activity // inferred from electronic annotation /// 0003714 // transcription corepressor activity // traceable author statement /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr11:65686727-65689017 (+) // 93.03 // q13.1"]
["11738049_a_at",-0.009780884,0.009781122,-0.15878749,0.22011042,0.052897215,-0.15905166,0.79643697,0.4973559,-1.065045,-0.09091438,1.065045,"down","ATP2C2",9914.0,"0006754 // ATP biosynthetic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0034220 // ion transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0000139 // Golgi membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0005388 // calcium-transporting ATPase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0015662 // ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016820 // hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:84402128-84497793 (+) // 97.39 // q24.1"]
["11753697_x_at",-3.2806396E-4,-0.10454273,3.2806396E-4,0.14355516,-0.01876545,0.051729202,0.57040983,0.18454741,-1.067094,-0.09368722,1.067094,"down","FCRLA",84824.0,"0030154 // cell differentiation // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation","chr1:161677054-161683251 (+) // 99.56 // q23.3"]
["11754568_s_at",0.016583443,0.060242653,-0.14136028,0.039362907,-0.016583443,-0.022784233,0.91551536,0.75495696,-1.0150212,-0.021509867,1.0150212,"down","FOXRED1",55572.0,"0055114 // oxidation-reduction process // inferred from electronic annotation","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0016491 // oxidoreductase activity // inferred from electronic annotation","chr11:126142928-126148027 (+) // 80.21 // q24.2"]
["11733925_a_at",0.17732239,-7.238388E-4,0.112428665,7.238388E-4,-0.05075741,-0.016469002,0.44793028,0.093967244,1.085613,0.11850992,1.085613,"up","RIOK1",83732.0,"0008152 // metabolic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation","","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr6:7389707-7418268 (+) // 96.32 // p24.3"]
["11734733_a_at",0.029178143,0.1973536,-0.10049844,-0.17320895,0.18151355,-0.029178143,0.9066396,0.7338989,1.0345253,0.048968893,1.0345253,"up","SLC13A3",64849.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0006835 // dicarboxylic acid transport // inferred from electronic annotation /// 0015744 // succinate transport // inferred from electronic annotation /// 0015746 // citrate transport // inferred from electronic annotation /// 0015810 // aspartate transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0071422 // succinate transmembrane transport // inferred from electronic annotation","0005624 // membrane fraction // inferred from electronic annotation /// 0005626 // insoluble fraction // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation /// 0005310 // dicarboxylic acid transmembrane transporter activity // inferred from electronic annotation /// 0005343 // organic acid:sodium symporter activity // inferred from electronic annotation /// 0015137 // citrate transmembrane transporter activity // inferred from electronic annotation /// 0015141 // succinate transmembrane transporter activity // inferred from electronic annotation /// 0015183 // L-aspartate transmembrane transporter activity // inferred from electronic annotation /// 0015293 // symporter activity // inferred from electronic annotation /// 0015362 // high affinity sodium:dicarboxylate symporter activity // inferred from electronic annotation /// 0017153 // sodium:dicarboxylate symporter activity // inferred from electronic annotation","chr20:45186462-45280098 (-) // 88.6 // q13.12"]
["11728108_a_at",0.24293137,0.09158039,-0.39507866,0.1819849,-0.165699,-0.09158039,0.99477494,0.9832352,1.0034086,0.004909138,1.0034086,"up","GHRL",51738.0,"0000187 // activation of MAPK activity // inferred from mutant phenotype /// 0001696 // gastric acid secretion // inferred from electronic annotation /// 0001937 // negative regulation of endothelial cell proliferation // inferred from direct assay /// 0006006 // glucose metabolic process // non-traceable author statement /// 0006916 // anti-apoptosis // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from sequence or structural similarity /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007204 // elevation of cytosolic calcium ion concentration // inferred from sequence or structural similarity /// 0007204 // elevation of cytosolic calcium ion concentration // inferred from electronic annotation /// 0008154 // actin polymerization or depolymerization // inferred from direct assay /// 0008343 // adult feeding behavior // inferred from sequence or structural similarity /// 0008343 // adult feeding behavior // inferred from electronic annotation /// 0009725 // response to hormone stimulus // inferred from direct assay /// 0009755 // hormone-mediated signaling pathway // traceable author statement /// 0016358 // dendrite development // inferred from direct assay /// 0016358 // dendrite development // inferred from electronic annotation /// 0016525 // negative regulation of angiogenesis // non-traceable author statement /// 0030252 // growth hormone secretion // traceable author statement /// 0032024 // positive regulation of insulin secretion // inferred from sequence or structural similarity /// 0032024 // positive regulation of insulin secretion // inferred from electronic annotation /// 0032095 // regulation of response to food // inferred from electronic annotation /// 0032097 // positive regulation of response to food // inferred from electronic annotation /// 0032100 // positive regulation of appetite // inferred from sequence or structural similarity /// 0032100 // positive regulation of appetite // inferred from electronic annotation /// 0032691 // negative regulation of interleukin-1 beta production // inferred from direct assay /// 0040013 // negative regulation of locomotion // inferred from electronic annotation /// 0040018 // positive regulation of multicellular organism growth // inferred by curator /// 0042127 // regulation of cell proliferation // inferred from direct assay /// 0042322 // negative regulation of circadian sleep/wake cycle, REM sleep // inferred from direct assay /// 0042536 // negative regulation of tumor necrosis factor biosynthetic process // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043400 // cortisol secretion // non-traceable author statement /// 0043627 // response to estrogen stimulus // inferred from direct assay /// 0045409 // negative regulation of interleukin-6 biosynthetic process // inferred from direct assay /// 0046010 // positive regulation of circadian sleep/wake cycle, non-REM sleep // inferred from direct assay /// 0046676 // negative regulation of insulin secretion // inferred from electronic annotation /// 0046697 // decidualization // inferred from direct assay /// 0050728 // negative regulation of inflammatory response // inferred from direct assay /// 0051216 // cartilage development // non-traceable author statement /// 0051461 // positive regulation of corticotropin secretion // inferred from direct assay /// 0051464 // positive regulation of cortisol secretion // inferred from direct assay /// 0051965 // positive regulation of synapse assembly // inferred from direct assay /// 0051965 // positive regulation of synapse assembly // inferred from electronic annotation /// 0060079 // regulation of excitatory postsynaptic membrane potential // inferred from electronic annotation /// 0060124 // positive regulation of growth hormone secretion // inferred from direct assay /// 0060399 // positive regulation of growth hormone receptor signaling pathway // inferred by curator /// 0061098 // positive regulation of protein tyrosine kinase activity // inferred from mutant phenotype","0005576 // extracellular region // inferred from direct assay /// 0005576 // extracellular region // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0030141 // secretory granule // traceable author statement /// 0030424 // axon // inferred from direct assay","0001664 // G-protein coupled receptor binding // inferred from sequence or structural similarity /// 0001664 // G-protein coupled receptor binding // inferred from electronic annotation /// 0005179 // hormone activity // inferred from electronic annotation /// 0016608 // growth hormone-releasing hormone activity // inferred from electronic annotation /// 0016608 // growth hormone-releasing hormone activity // inferred from sequence or structural similarity /// 0016608 // growth hormone-releasing hormone activity // traceable author statement /// 0030296 // protein tyrosine kinase activator activity // inferred from mutant phenotype /// 0031768 // ghrelin receptor binding // inferred from sequence or structural similarity /// 0031768 // ghrelin receptor binding // traceable author statement /// 0031768 // ghrelin receptor binding // inferred from electronic annotation","chr3:10327358-10334631 (-) // 88.35 // p25.3"]
["11736836_at",0.0014162064,0.044365406,-0.064058304,-0.050502777,-0.0014162064,0.03232622,0.99736744,0.99170184,1.0003041,4.3866105E-4,1.0003041,"up","TPCN2",219931.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0006874 // cellular calcium ion homeostasis // inferred from direct assay /// 0006939 // smooth muscle contraction // inferred from sequence or structural similarity /// 0006939 // smooth muscle contraction // inferred from electronic annotation /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0051209 // release of sequestered calcium ion into cytosol // inferred from electronic annotation /// 0051925 // regulation of calcium ion transport via voltage-gated calcium channel activity // inferred from sequence or structural similarity /// 0051925 // regulation of calcium ion transport via voltage-gated calcium channel activity // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0070588 // calcium ion transmembrane transport // inferred from electronic annotation","0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005245 // voltage-gated calcium channel activity // inferred from sequence or structural similarity /// 0005245 // voltage-gated calcium channel activity // inferred from electronic annotation /// 0005262 // calcium channel activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0072345 // NAADP-sensitive calcium-release channel activity // inferred from direct assay /// 0072345 // NAADP-sensitive calcium-release channel activity // inferred from electronic annotation","chr11:68816349-68858173 (+) // 76.0 // q13.3"]
["11750176_x_at",0.03371668,-0.073647976,0.11551666,-0.03371668,0.22719526,-0.11745739,0.9996662,0.99907154,-1.0001007,-1.4531802E-4,1.0001007,"down","LOC645954",645954.0,"","","0003779 // actin binding // inferred from electronic annotation","chr10:30984849-31005942 (+) // 94.02 // p11.23"]
["11743714_a_at",0.05232334,-0.055678368,-0.06965017,0.25253725,-0.025417328,0.025417328,0.67937243,0.31143168,-1.0781173,-0.108514085,1.0781173,"down","ARID4A",5926.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0017053 // transcriptional repressor complex // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement","chr14:58765102-58840596 (+) // 98.96 // q23.1"]
["11731102_a_at",-0.014279604,0.15011382,-0.21866512,0.016624928,-0.04181552,0.014279604,0.9457646,0.8357461,-1.0167558,-0.023973247,1.0167558,"down","PFN4",375189.0,"0007010 // cytoskeleton organization // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation","chr2:24337704-24346347 (-) // 66.41 // p23.3"]
["11741924_a_at",-0.11870718,-0.16470432,0.008113861,-0.008113861,0.13493204,0.05683756,0.42865884,0.081896015,-1.1118672,-0.15298447,1.1118672,"down","GRB10",2887.0,"0007165 // signal transduction // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // inferred from sequence or structural similarity /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0030178 // negative regulation of Wnt receptor signaling pathway // inferred from direct assay /// 0030178 // negative regulation of Wnt receptor signaling pathway // inferred from electronic annotation /// 0030949 // positive regulation of vascular endothelial growth factor receptor signaling pathway // inferred from direct assay /// 0032868 // response to insulin stimulus // inferred from sequence or structural similarity /// 0042326 // negative regulation of phosphorylation // inferred from electronic annotation /// 0042327 // positive regulation of phosphorylation // inferred from sequence or structural similarity /// 0045719 // negative regulation of glycogen biosynthetic process // inferred from sequence or structural similarity /// 0046325 // negative regulation of glucose import // inferred from sequence or structural similarity /// 0046325 // negative regulation of glucose import // inferred from electronic annotation /// 0046627 // negative regulation of insulin receptor signaling pathway // inferred from sequence or structural similarity /// 0046627 // negative regulation of insulin receptor signaling pathway // inferred from electronic annotation /// 0048009 // insulin-like growth factor receptor signaling pathway // inferred from electronic annotation","0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement","0005070 // SH3/SH2 adaptor activity // inferred from electronic annotation /// 0005070 // SH3/SH2 adaptor activity // traceable author statement /// 0005158 // insulin receptor binding // inferred from sequence or structural similarity /// 0005158 // insulin receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation","chr7:50657759-50823681 (-) // 99.75 // p12.1"]
["11754814_a_at",0.010753632,-0.0023975372,0.03740883,0.0023975372,-0.050660133,-0.0118255615,0.52905184,0.14793852,1.0247588,0.0352844,1.0247588,"up","NUP93",9688.0,"0005975 // carbohydrate metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0008645 // hexose transport // traceable author statement /// 0010827 // regulation of glucose transport // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0015758 // glucose transport // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051028 // mRNA transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // traceable author statement /// 0005643 // nuclear pore // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation","","chr16:56870510-56878676 (+) // 81.19 // q13"]
["11744809_a_at",0.09989333,0.018458605,-0.018458605,-0.01999998,-0.063421726,0.061006784,0.77958435,0.46487626,1.0286623,0.04076947,1.0286623,"up","AS3MT /// C10orf32-AS3MT","100528007 /// 57412","0009404 // toxin metabolic process // inferred from sequence or structural similarity /// 0009404 // toxin metabolic process // inferred from electronic annotation /// 0018872 // arsonoacetate metabolic process // inferred from sequence or structural similarity /// 0018872 // arsonoacetate metabolic process // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation /// 0046685 // response to arsenic-containing substance // inferred from electronic annotation","0005625 // soluble fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // inferred from electronic annotation","0008168 // methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0030791 // arsenite methyltransferase activity // inferred from sequence or structural similarity /// 0030791 // arsenite methyltransferase activity // inferred from electronic annotation /// 0030792 // methylarsonite methyltransferase activity // inferred from sequence or structural similarity /// 0030792 // methylarsonite methyltransferase activity // inferred from electronic annotation","chr10:104629272-104661653 (+) // 96.56 // q24.32"]
["11742097_a_at",0.028579712,0.106152534,-0.05159712,-0.038894176,-0.028579712,0.066524506,0.8686345,0.6462382,1.0196176,0.028028121,1.0196176,"up","SEC61A2",55176.0,"0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030670 // phagocytic vesicle membrane // traceable author statement","0015450 // P-P-bond-hydrolysis-driven protein transmembrane transporter activity // inferred from electronic annotation /// 0043022 // ribosome binding // inferred from electronic annotation","chr10:12171639-12207403 (+) // 95.9 // p14"]
["11730936_s_at",0.08610678,-0.19500685,0.0070548058,0.02847433,-0.0070548058,-0.08296347,0.9635551,0.88847214,-1.0093551,-0.013433771,1.0093551,"down","AKNA",80709.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation","chr9:117094678-117160783 (-) // 80.05 // q32"]
["11727517_a_at",-0.05705452,0.0068359375,0.0719161,-0.108030796,-0.0068359375,0.063741684,0.89925617,0.71631,1.0169679,0.024274131,1.0169679,"up","TMEM79",84283.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr1:156252725-156262205 (+) // 96.31 // q22"]
["11733884_a_at",0.067518234,0.039435387,0.0036411285,-0.06454563,-0.0036411285,-0.06469822,0.33828416,0.041803554,1.0578682,0.08115995,1.0578682,"up","DEPDC1",55635.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0017053 // transcriptional repressor complex // inferred from direct assay","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr1:68939836-68962904 (-) // 82.08 // p31.2"]
["11729404_a_at",0.01973772,-0.047435284,-0.019738197,0.13615084,0.08170414,-0.12529278,0.8474117,0.59968054,-1.0328752,-0.046665918,1.0328752,"down","DOC2A",8448.0,"0006810 // transport // inferred from electronic annotation /// 0006887 // exocytosis // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007399 // nervous system development // traceable author statement /// 0016079 // synaptic vesicle exocytosis // inferred from electronic annotation /// 0017158 // regulation of calcium ion-dependent exocytosis // inferred from mutant phenotype /// 0017158 // regulation of calcium ion-dependent exocytosis // inferred from electronic annotation","0005764 // lysosome // inferred from electronic annotation /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030672 // synaptic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation /// 0005488 // binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005544 // calcium-dependent phospholipid binding // inferred from electronic annotation","chr16:30016834-30022401 (-) // 90.2 // p11.2"]
["11736244_s_at",-0.016330719,0.0063438416,-0.0063438416,0.06689644,-0.047582626,0.06383324,0.7609513,0.43464348,-1.0232505,-0.033159316,1.0232505,"down","HIST1H2AC",8334.0,"0006334 // nucleosome assembly // non-traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation","0000786 // nucleosome // non-traceable author statement /// 0000786 // nucleosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation","chr6:26124396-26138605 (+) // 90.6 // p22.2"]
["11748529_x_at",-0.019376755,-0.10048866,0.019376755,0.045057297,0.021497726,-0.04795456,0.75795496,0.4276891,-1.0278975,-0.039696377,1.0278975,"down","CASP4",837.0,"0006508 // proteolysis // inferred from electronic annotation /// 0006508 // proteolysis // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006917 // induction of apoptosis // traceable author statement /// 0042981 // regulation of apoptotic process // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0004197 // cysteine-type endopeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr11:104815479-104839323 (-) // 99.92 // q22.3"]
["11717539_at",-0.006392479,0.006392479,0.071816444,-0.061188698,-0.010412216,0.022554398,0.6751862,0.3059286,1.0283189,0.040287714,1.0283189,"up","RYBP",23429.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007275 // multicellular organismal development // traceable author statement /// 0035518 // histone H2A monoubiquitination // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0031519 // PcG protein complex // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003714 // transcription corepressor activity // inferred from electronic annotation /// 0003714 // transcription corepressor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:72423754-72496264 (-) // 91.39 // p13"]
["11722163_x_at",0.0077371597,-0.0077376366,-0.021208763,0.09414148,-0.031050205,0.01411438,0.7596304,0.43159598,-1.0229992,-0.03280497,1.0229992,"down","PLK2",10769.0,"0000082 // G1/S transition of mitotic cell cycle // inferred from mutant phenotype /// 0000278 // mitotic cell cycle // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007052 // mitotic spindle organization // inferred from direct assay /// 0007093 // mitotic cell cycle checkpoint // inferred from sequence or structural similarity /// 0007093 // mitotic cell cycle checkpoint // inferred from electronic annotation /// 0007165 // signal transduction // inferred from mutant phenotype /// 0007265 // Ras protein signal transduction // inferred from sequence or structural similarity /// 0007613 // memory // inferred from sequence or structural similarity /// 0007613 // memory // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0032486 // Rap protein signal transduction // inferred from sequence or structural similarity /// 0043066 // negative regulation of apoptotic process // inferred from sequence or structural similarity /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from mutant phenotype /// 0046599 // regulation of centriole replication // inferred from direct assay /// 0046599 // regulation of centriole replication // inferred from mutant phenotype /// 0048167 // regulation of synaptic plasticity // inferred from sequence or structural similarity /// 0048167 // regulation of synaptic plasticity // inferred from electronic annotation /// 0060291 // long-term synaptic potentiation // inferred from sequence or structural similarity /// 0060292 // long term synaptic depression // inferred from sequence or structural similarity","0005622 // intracellular // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005814 // centriole // inferred from direct assay /// 0005814 // centriole // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0030425 // dendrite // inferred from sequence or structural similarity /// 0030425 // dendrite // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr5:57749808-57756766 (-) // 92.72 // q11.2"]
["11735240_a_at",0.1084609,-0.15786123,0.0791626,-0.025027752,0.025027752,-0.2894926,0.7736896,0.45561463,1.0765522,0.10641821,1.0765522,"up","ACYP2",98.0,"0006796 // phosphate-containing compound metabolic process // traceable author statement","0005739 // mitochondrion // inferred from electronic annotation","0003998 // acylphosphatase activity // inferred from electronic annotation /// 0003998 // acylphosphatase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation","chr2:54342409-54532433 (+) // 93.94 // p16.2"]
["11760971_at",0.24066806,-0.0304389,-0.09658623,-0.09031725,0.2064662,0.030439138,0.98183185,0.93881464,-1.007641,-0.01098167,1.007641,"down","TMCO6",55374.0,"0006606 // protein import into nucleus // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008565 // protein transporter activity // inferred from electronic annotation","chr5:140019037-140022012 (+) // 98.85 // q31.3"]
["11717185_a_at",-0.029163837,0.034383297,-0.09870672,0.054516792,-0.007908821,0.007908821,0.6804881,0.31281474,-1.0347877,-0.049334746,1.0347877,"down","MEF2D",4209.0,"0001649 // osteoblast differentiation // inferred from electronic annotation /// 0001958 // endochondral ossification // inferred from electronic annotation /// 0002062 // chondrocyte differentiation // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // inferred from direct assay /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007512 // adult heart development // inferred from expression pattern /// 0007517 // muscle organ development // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0000977 // RNA polymerase II regulatory region sequence-specific DNA binding // inferred from direct assay /// 0000981 // sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from electronic annotation /// 0033613 // activating transcription factor binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0042826 // histone deacetylase binding // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation","chr1:156433518-156470529 (-) // 92.07 // q22"]
["11747330_s_at",-0.014022827,-0.0049409866,0.014923096,0.0049409866,0.04727745,-0.056069374,0.9996121,0.99847883,-1.0000439,-6.328823E-5,1.0000439,"down","ACAD9",28976.0,"0008152 // metabolic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0030425 // dendrite // inferred from direct assay","0003995 // acyl-CoA dehydrogenase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016627 // oxidoreductase activity, acting on the CH-CH group of donors // inferred from electronic annotation /// 0050660 // flavin adenine dinucleotide binding // inferred from electronic annotation","chr3:128598332-128631770 (+) // 100.0 // q21.3"]
["11720654_a_at",0.009542465,-0.009542465,0.08554077,-0.02135849,0.0100336075,-0.052690506,0.6052986,0.2189302,1.0351588,0.049852036,1.0351588,"up","BBX",56987.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation","chr3:107241782-107530171 (+) // 98.21 // q13.12"]
["11748683_x_at",-0.075422764,0.075422764,0.2314372,0.14875984,-0.0789175,-0.13595057,0.782167,0.4690808,1.0711658,0.0991818,1.0711658,"up","NXN",64359.0,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030178 // negative regulation of Wnt receptor signaling pathway // inferred from sequence or structural similarity /// 0031397 // negative regulation of protein ubiquitination // inferred from sequence or structural similarity /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0072358 // cardiovascular system development // inferred from sequence or structural similarity","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation","0004791 // thioredoxin-disulfide reductase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0047134 // protein-disulfide reductase activity // inferred from electronic annotation","chr17:703720-833291 (-) // 97.12 // p13.3"]
["11743031_a_at",-0.05522251,-0.042448997,-0.084023476,0.06423664,0.042448997,0.065176964,0.09690056,0.0012020785,-1.0851184,-0.11785249,1.0851184,"down","S100A6",6277.0,"0007165 // signal transduction // traceable author statement /// 0007409 // axonogenesis // non-traceable author statement /// 0034220 // ion transmembrane transport // inferred from electronic annotation /// 0048146 // positive regulation of fibroblast proliferation // non-traceable author statement","0001726 // ruffle // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from direct assay /// 0005635 // nuclear envelope // non-traceable author statement /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031234 // extrinsic to internal side of plasma membrane // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0005509 // calcium ion binding // inferred from direct assay /// 0005509 // calcium ion binding // non-traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005523 // tropomyosin binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0015075 // ion transmembrane transporter activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0044548 // S100 protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0048306 // calcium-dependent protein binding // inferred from direct assay","chr1:153507082-153508717 (-) // 52.05 // q21.3"]
["11743483_a_at",-0.04779339,0.011189461,0.08309555,0.015957832,-0.011189461,-0.021778107,0.8562996,0.6202733,1.01478,0.021167055,1.01478,"up","RNASEH2B",79621.0,"0006401 // RNA catabolic process // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0032299 // ribonuclease H2 complex // inferred from direct assay /// 0032299 // ribonuclease H2 complex // inferred from electronic annotation","","chr13:51483813-51530898 (+) // 94.5 // q14.3"]
["11737475_at",-0.048059702,0.1365974,-0.13659644,0.16784787,-0.3291657,0.048059702,0.9693873,0.9044475,1.0151783,0.021733169,1.0151783,"up","MAB21L3",126868.0,"","","","chr1:116654375-116677861 (+) // 79.75 // p13.1"]
["11763945_x_at",-0.04259014,0.10152149,0.0128211975,0.071035385,-0.041697502,-0.0128211975,0.9133649,0.74981743,1.012844,0.018411936,1.012844,"up","RPSAP9",653162.0,"","","","chr9:79013514-79014900 (-) // 76.04 // q21.13"]
["11760821_at",0.03174138,-0.031741142,-0.15082312,-0.25677228,0.061175823,0.44027925,0.8296738,0.56146383,-1.0956867,-0.1318353,1.0956867,"down","","","","","","chr2:73927555-73934613 (+) // 54.99 // p13.1"]
["11748581_a_at",0.07895374,-0.13450694,-0.041561365,0.0909524,-0.13620853,0.041561365,0.91506386,0.75357765,-1.0218192,-0.031139996,1.0218192,"down","C9orf11",54586.0,"0006897 // endocytosis // inferred from electronic annotation /// 0007342 // fusion of sperm to egg plasma membrane // inferred from electronic annotation /// 0060478 // acrosomal vesicle exocytosis // inferred from electronic annotation","0002079 // inner acrosomal membrane // inferred from electronic annotation /// 0002080 // acrosomal membrane // inferred from electronic annotation /// 0002081 // outer acrosomal membrane // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","","chr9:27292140-27297134 (-) // 95.84 // p21.2"]
["11734079_x_at",-0.027980804,-0.040202618,-0.15056753,0.027981281,0.09233999,0.08540964,0.30807015,0.032406773,-1.1030468,-0.14149396,1.1030468,"down","LONP2",83752.0,"0006465 // signal peptide processing // inferred from mutant phenotype /// 0006508 // proteolysis // inferred from electronic annotation /// 0006515 // misfolded or incompletely synthesized protein catabolic process // not recorded /// 0006625 // protein targeting to peroxisome // non-traceable author statement /// 0007031 // peroxisome organization // non-traceable author statement /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0031998 // regulation of fatty acid beta-oxidation // inferred from mutant phenotype","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005777 // peroxisome // inferred from direct assay /// 0005777 // peroxisome // inferred from electronic annotation /// 0005782 // peroxisomal matrix // not recorded /// 0005782 // peroxisomal matrix // inferred from electronic annotation /// 0009295 // nucleoid // not recorded","0000166 // nucleotide binding // inferred from electronic annotation /// 0002020 // protease binding // inferred from physical interaction /// 0004176 // ATP-dependent peptidase activity // not recorded /// 0004176 // ATP-dependent peptidase activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // not recorded /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // not recorded /// 0005524 // ATP binding // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from direct assay /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // not recorded","chr16:48278210-48387425 (+) // 78.94 // q12.1"]
["11745592_a_at",-0.0953908,0.0025115013,-0.0075511932,-0.0025115013,0.010801315,0.10265207,0.58155656,0.19550465,-1.0500495,-0.0704574,1.0500495,"down","WDR59",79726.0,"","","","chr16:74942631-75018981 (-) // 97.57 // q23.1"]
["11759271_x_at",-0.047792196,0.12604213,-0.0446558,0.31606698,0.0446558,-0.056477547,0.8034259,0.5109561,-1.0645303,-0.09021695,1.0645303,"down","IFNA5",3442.0,"0006952 // defense response // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0009615 // response to virus // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0060337 // type I interferon-mediated signaling pathway // traceable author statement /// 0060338 // regulation of type I interferon-mediated signaling pathway // traceable author statement","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation","0005125 // cytokine activity // inferred from electronic annotation /// 0005126 // cytokine receptor binding // inferred from electronic annotation /// 0005126 // cytokine receptor binding // traceable author statement","chr9:21304324-21305312 (-) // 90.59 // p21.3"]
["11754640_a_at",-0.0913887,-0.027288437,-0.11879587,0.2512045,0.16104841,0.027288437,0.30989364,0.03282833,-1.1693213,-0.2256714,1.1693213,"down","EPHX2",2053.0,"0006805 // xenobiotic metabolic process // non-traceable author statement /// 0006874 // cellular calcium ion homeostasis // non-traceable author statement /// 0006954 // inflammatory response // non-traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008217 // regulation of blood pressure // non-traceable author statement /// 0009636 // response to toxin // non-traceable author statement /// 0009636 // response to toxin // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from direct assay /// 0017144 // drug metabolic process // non-traceable author statement /// 0019439 // aromatic compound catabolic process // inferred from electronic annotation /// 0042632 // cholesterol homeostasis // inferred from direct assay /// 0045909 // positive regulation of vasodilation // non-traceable author statement /// 0046839 // phospholipid dephosphorylation // inferred from direct assay /// 0072593 // reactive oxygen species metabolic process // non-traceable author statement /// 0090181 // regulation of cholesterol metabolic process // inferred from mutant phenotype","0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005777 // peroxisome // inferred from electronic annotation /// 0005777 // peroxisome // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005829 // cytosol // non-traceable author statement /// 0005829 // cytosol // inferred from direct assay /// 0005925 // focal adhesion // inferred from direct assay","0000287 // magnesium ion binding // inferred from direct assay /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004301 // epoxide hydrolase activity // inferred from direct assay /// 0004301 // epoxide hydrolase activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from direct assay /// 0042577 // lipid phosphatase activity // inferred from direct assay /// 0042803 // protein homodimerization activity // non-traceable author statement /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:27348667-27402439 (+) // 99.61 // p21.2"]
["11760673_x_at",-0.059982777,0.087189674,0.04975891,-0.07204676,-0.04599285,0.04599285,0.7596304,0.43160048,1.0350288,0.04967093,1.0350288,"up","LYRM4",57128.0,"","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation","","chr6:5108785-5109468 (-) // 49.85 // p25.1"]
["11746051_a_at",-0.0012168884,0.0012168884,-0.050377846,0.013305664,-0.01785469,0.037590027,0.66890275,0.2975291,-1.0194608,-0.027806299,1.0194608,"down","HP1BP3",50809.0,"0006334 // nucleosome assembly // inferred from electronic annotation","0000786 // nucleosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation","chr1:21101933-21113154 (-) // 45.44 // p36.12"]
["11722785_x_at",0.009292126,-0.009292603,-0.1110239,0.056139946,-0.021817207,0.059760094,0.5967027,0.21055849,-1.0485307,-0.0683691,1.0485307,"down","GRWD1",83743.0,"","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay","","chr19:48949029-48957230 (+) // 86.15 // q13.33"]
["11741597_s_at",-0.0086193085,0.050224304,-0.13944125,0.24320531,-0.09431338,0.0086193085,0.79707533,0.49864206,-1.0607729,-0.08511582,1.0607729,"down","PIKFYVE /// SMR3A /// SMR3B","10879 /// 200576 /// 26952","0006898 // receptor-mediated endocytosis // inferred from mutant phenotype /// 0016310 // phosphorylation // inferred from electronic annotation /// 0034504 // protein localization to nucleus // inferred from mutant phenotype /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0042147 // retrograde transport, endosome to Golgi // inferred from mutant phenotype /// 0044267 // cellular protein metabolic process // inferred from electronic annotation /// 0046488 // phosphatidylinositol metabolic process // inferred from electronic annotation /// 0046854 // phosphatidylinositol phosphorylation // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // traceable author statement /// 0005622 // intracellular // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from direct assay /// 0010008 // endosome membrane // inferred from electronic annotation /// 0012506 // vesicle membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from direct assay /// 0045121 // membrane raft // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000285 // 1-phosphatidylinositol-3-phosphate 5-kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016307 // phosphatidylinositol phosphate kinase activity // inferred from electronic annotation /// 0016308 // 1-phosphatidylinositol-4-phosphate 5-kinase activity // traceable author statement /// 0016308 // 1-phosphatidylinositol-4-phosphate 5-kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr4:71226477-71232836 (+) // 99.68 // q13.3"]
["11756485_a_at",0.06259203,0.022799015,0.021014214,-0.021014214,-0.16371822,-0.08672905,0.34393412,0.044061277,1.0912303,0.12595557,1.0912303,"up","TXLNA",200081.0,"0006887 // exocytosis // inferred from electronic annotation /// 0008283 // cell proliferation // non-traceable author statement","0005576 // extracellular region // non-traceable author statement /// 0005737 // cytoplasm // inferred from direct assay","0005125 // cytokine activity // non-traceable author statement /// 0030372 // high molecular weight B cell growth factor receptor binding // non-traceable author statement","chr1:32645307-32663885 (+) // 96.44 // p35.1"]
["11730279_at",0.11061764,-0.010966778,0.21530533,0.010966778,-0.023150682,-0.03994274,0.5216268,0.1421678,1.0885147,0.12236087,1.0885147,"up","SPATA16",83893.0,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation","0005794 // Golgi apparatus // inferred from electronic annotation","","chr3:172607146-172859058 (-) // 98.41 // q26.31"]
["11727272_x_at",-0.07283807,-0.02576828,0.0075907707,0.21799016,0.06263113,-0.0075907707,0.5446502,0.16083142,-1.0877513,-0.1213487,1.0877513,"down","TRIM55",84675.0,"0007165 // signal transduction // non-traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005874 // microtubule // non-traceable author statement","0004871 // signal transducer activity // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:67039130-67087720 (+) // 94.88 // q13.1"]
["11761098_at",0.02280426,-0.09883928,0.01548171,0.12561488,-0.24833822,-0.01548171,0.94534135,0.8342545,1.0181032,0.025883866,1.0181032,"up","AKNAD1",254268.0,"","0005737 // cytoplasm // inferred from direct assay","","chr1:109379345-109399716 (-) // 89.68 // p13.3"]
["11735152_a_at",-0.06179118,0.022120714,-0.280169,0.23678446,-0.022120476,0.071992874,0.54471815,0.1608625,-1.1504238,-0.20216538,1.1504238,"down","SLC8A1",6546.0,"0001666 // response to hypoxia // inferred from electronic annotation /// 0001892 // embryonic placenta development // inferred from electronic annotation /// 0002026 // regulation of the force of heart contraction // inferred by curator /// 0002026 // regulation of the force of heart contraction // inferred from sequence or structural similarity /// 0002026 // regulation of the force of heart contraction // inferred from electronic annotation /// 0002027 // regulation of heart rate // inferred from sequence or structural similarity /// 0002028 // regulation of sodium ion transport // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006811 // ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0006874 // cellular calcium ion homeostasis // inferred from electronic annotation /// 0006936 // muscle contraction // traceable author statement /// 0006950 // response to stress // inferred from electronic annotation /// 0007154 // cell communication // inferred from electronic annotation /// 0007204 // elevation of cytosolic calcium ion concentration // inferred from electronic annotation /// 0007584 // response to nutrient // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0009749 // response to glucose stimulus // inferred from electronic annotation /// 0010881 // regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion // inferred from sequence or structural similarity /// 0014829 // vascular smooth muscle contraction // inferred from sequence or structural similarity /// 0021537 // telencephalon development // inferred from electronic annotation /// 0033198 // response to ATP // inferred from electronic annotation /// 0034614 // cellular response to reactive oxygen species // inferred from direct assay /// 0035050 // embryonic heart tube development // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042542 // response to hydrogen peroxide // inferred from electronic annotation /// 0044557 // relaxation of smooth muscle // inferred from sequence or structural similarity /// 0051481 // reduction of cytosolic calcium ion concentration // inferred from sequence or structural similarity /// 0051924 // regulation of calcium ion transport // inferred from electronic annotation /// 0055013 // cardiac muscle cell development // inferred from sequence or structural similarity /// 0055013 // cardiac muscle cell development // inferred from electronic annotation /// 0055074 // calcium ion homeostasis // inferred from sequence or structural similarity /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0055119 // relaxation of cardiac muscle // inferred by curator /// 0060401 // cytosolic calcium ion transport // traceable author statement /// 0060402 // calcium ion transport into cytosol // inferred from sequence or structural similarity /// 0060402 // calcium ion transport into cytosol // inferred from electronic annotation /// 0070509 // calcium ion import // inferred from direct assay /// 0071313 // cellular response to caffeine // inferred from sequence or structural similarity /// 0071320 // cellular response to cAMP // inferred from electronic annotation /// 0071436 // sodium ion export // inferred from direct assay /// 0086064 // cell communication by electrical coupling involved in cardiac conduction // inferred from sequence or structural similarity","0005624 // membrane fraction // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0014704 // intercalated disc // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0030018 // Z disc // inferred from sequence or structural similarity /// 0030315 // T-tubule // inferred from sequence or structural similarity /// 0030315 // T-tubule // inferred from electronic annotation /// 0042383 // sarcolemma // inferred from sequence or structural similarity /// 0042383 // sarcolemma // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from electronic annotation","0005432 // calcium:sodium antiporter activity // inferred from direct assay /// 0005432 // calcium:sodium antiporter activity // inferred from electronic annotation /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0008092 // cytoskeletal protein binding // inferred from direct assay /// 0015297 // antiporter activity // inferred from electronic annotation /// 0030506 // ankyrin binding // inferred from physical interaction /// 0030506 // ankyrin binding // inferred from sequence or structural similarity /// 0031072 // heat shock protein binding // inferred from electronic annotation /// 0044325 // ion channel binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:40339285-40680684 (-) // 95.12 // p22.1"]
["11750723_x_at",-0.09626579,-0.03245926,-0.06005001,0.073991776,0.061656952,0.03245926,0.16422698,0.0058548553,-1.0859525,-0.11896103,1.0859525,"down","MICB",4277.0,"0002429 // immune response-activating cell surface receptor signaling pathway // inferred from direct assay /// 0006955 // immune response // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from direct assay /// 0009408 // response to heat // inferred from direct assay /// 0019835 // cytolysis // inferred from electronic annotation /// 0019882 // antigen processing and presentation // inferred from electronic annotation /// 0032526 // response to retinoic acid // inferred from direct assay /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0046629 // gamma-delta T cell activation // inferred from direct assay /// 0050689 // negative regulation of defense response to virus by host // inferred from direct assay /// 0050776 // regulation of immune response // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0042612 // MHC class I protein complex // inferred from electronic annotation","0046703 // natural killer cell lectin-like receptor binding // inferred from direct assay","chr6:31465862-31478898 (+) // 65.23 // p21.33"]
["11748501_a_at",0.008167982,0.008167982,-0.24023032,-0.14140272,0.13683558,-0.008167744,0.835243,0.5747696,-1.0499979,-0.07038648,1.0499979,"down","C3orf32",51066.0,"","","","chr3:8661094-8693764 (-) // 83.8 // p26.1"]
["11718767_x_at",-0.105947495,-0.11982155,-0.08610058,0.09202862,0.09463596,0.08610153,0.044616908,4.262035E-5,-1.1446278,-0.19487856,1.1446278,"down","PRSS23",11098.0,"0006508 // proteolysis // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay","0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr11:86511281-86522275 (+) // 91.21 // q14.2"]
["11739879_a_at",-0.02200985,-0.11543393,0.022010088,-0.21940327,0.11273861,0.16261053,0.8816448,0.6750977,-1.0403914,-0.05712644,1.0403914,"down","TNIK",23043.0,"0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006950 // response to stress // inferred from direct assay /// 0007010 // cytoskeleton organization // inferred from mutant phenotype /// 0007243 // intracellular protein kinase cascade // inferred from direct assay /// 0007256 // activation of JNKK activity // inferred from direct assay /// 0007256 // activation of JNKK activity // inferred from mutant phenotype /// 0007399 // nervous system development // inferred from electronic annotation /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0031532 // actin cytoskeleton reorganization // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0048814 // regulation of dendrite morphogenesis // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0055037 // recycling endosome // inferred from electronic annotation /// 0055037 // recycling endosome // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005083 // small GTPase regulator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // non-traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr3:170779846-171178118 (-) // 97.99 // q26.2"]
["11752519_x_at",-0.01027298,-0.019747257,0.078342915,0.0028028488,0.08394861,-0.0028028488,0.92985463,0.79125416,-1.0082653,-0.011875236,1.0082653,"down","EHD2",30846.0,"0006184 // GTP catabolic process // inferred from electronic annotation /// 0006412 // translation // inferred from electronic annotation /// 0006897 // endocytosis // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0030866 // cortical actin cytoskeleton organization // inferred from electronic annotation /// 0032456 // endocytic recycling // inferred from genetic interaction","0005622 // intracellular // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005768 // endosome // inferred from electronic annotation /// 0005840 // ribosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0010008 // endosome membrane // traceable author statement /// 0010008 // endosome membrane // inferred from electronic annotation /// 0015935 // small ribosomal subunit // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0055038 // recycling endosome membrane // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0019843 // rRNA binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation","chr19:48216678-48244834 (+) // 99.69 // q13.33"]
["11748084_a_at",0.29257488,-0.014093161,0.23577213,-0.09226203,-0.023305893,0.014092922,0.47078073,0.10738094,1.1528804,0.20524289,1.1528804,"up","MFGE8",4240.0,"0001525 // angiogenesis // inferred from electronic annotation /// 0006910 // phagocytosis, recognition // inferred from electronic annotation /// 0006911 // phagocytosis, engulfment // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007338 // single fertilization // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0043627 // response to estrogen stimulus // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0050766 // positive regulation of phagocytosis // inferred from electronic annotation /// 2000427 // positive regulation of apoptotic cell clearance // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0019897 // extrinsic to plasma membrane // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from direct assay","0001786 // phosphatidylserine binding // inferred from electronic annotation /// 0005178 // integrin binding // inferred from electronic annotation /// 0008429 // phosphatidylethanolamine binding // inferred from electronic annotation","chr15:89442545-89456614 (-) // 99.66 // q26.1"]
["11744401_a_at",-0.0018482208,0.0018482208,0.09134674,0.0068626404,-0.014907837,-0.057811737,0.60499376,0.21822491,1.0369895,0.052401215,1.0369895,"up","CAMTA1",23261.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation","chr1:6845516-6932098 (+) // 66.22 // p36.31"]
["11733180_a_at",-0.038170815,-0.006438732,0.006438732,0.04871607,-0.006438732,0.10161066,0.52905184,0.14786083,-1.0429617,-0.0606862,1.0429617,"down","ETV1",2115.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0048935 // peripheral nervous system neuron development // traceable author statement","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr7:13930852-14029291 (-) // 92.33 // p21.2"]
["11724074_a_at",0.022141933,0.0061039925,-0.007296562,-0.0061044693,0.03499937,-0.032723904,0.9005488,0.7198921,1.0057415,0.0082595125,1.0057415,"up","SMARCAD1",56916.0,"0000018 // regulation of DNA recombination // inferred from expression pattern /// 0006338 // chromatin remodeling // non-traceable author statement /// 0009117 // nucleotide metabolic process // non-traceable author statement /// 0016568 // chromatin modification // non-traceable author statement /// 0016568 // chromatin modification // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // non-traceable author statement /// 0051260 // protein homooligomerization // non-traceable author statement /// 0051304 // chromosome separation // inferred from mutant phenotype /// 0070932 // histone H3 deacetylation // inferred from mutant phenotype /// 0070933 // histone H4 deacetylation // inferred from mutant phenotype","0000792 // heterochromatin // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0016363 // nuclear matrix // non-traceable author statement /// 0043596 // nuclear replication fork // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // non-traceable author statement /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr4:95129015-95212441 (+) // 95.82 // q22.3"]
["11720003_at",0.098255634,0.10145807,-0.006884098,0.006884098,-0.19154501,-0.038866997,0.48754758,0.11749704,1.1009781,0.13878582,1.1009781,"up","NRARP",441478.0,"0001569 // patterning of blood vessels // inferred from electronic annotation /// 0001938 // positive regulation of endothelial cell proliferation // inferred from electronic annotation /// 0002040 // sprouting angiogenesis // inferred from electronic annotation /// 0002043 // blood vessel endothelial cell proliferation involved in sprouting angiogenesis // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0022407 // regulation of cell-cell adhesion // inferred from electronic annotation /// 0045581 // negative regulation of T cell differentiation // inferred from electronic annotation /// 0045746 // negative regulation of Notch signaling pathway // inferred from mutant phenotype /// 0045746 // negative regulation of Notch signaling pathway // inferred from electronic annotation /// 0090263 // positive regulation of canonical Wnt receptor signaling pathway // inferred from mutant phenotype","","","chr9:140194093-140196723 (-) // 81.17 // q34.3"]
["11716459_at",0.018601418,0.0042123795,0.082304955,-0.041311264,-0.024457932,-0.0042123795,0.4420517,0.090537265,1.0412862,0.058366694,1.0412862,"up","TUBA4A",7277.0,"0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000226 // microtubule cytoskeleton organization // inferred from electronic annotation /// 0000278 // mitotic cell cycle // traceable author statement /// 0002576 // platelet degranulation // traceable author statement /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006457 // protein folding // traceable author statement /// 0007017 // microtubule-based process // inferred from electronic annotation /// 0007018 // microtubule-based movement // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement /// 0051258 // protein polymerization // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0005874 // microtubule // inferred from electronic annotation /// 0005881 // cytoplasmic microtubule // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005198 // structural molecule activity // inferred from electronic annotation /// 0005200 // structural constituent of cytoskeleton // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation","chr2:220114432-220119747 (-) // 93.59 // q35"]
["11748589_a_at",0.041527748,0.043475628,-0.15107489,0.0,-0.06535864,0.0,0.999226,0.99738324,-1.0001647,-2.3766044E-4,1.0001647,"down","EFCAB6",64800.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr22:43936054-44208117 (-) // 99.88 // q13.2"]
["11723889_a_at",0.054739,-0.06548977,-0.015628338,0.0081954,-0.008195877,0.01939392,0.8880099,0.69177103,-1.0106318,-0.015257481,1.0106318,"down","HELQ",113510.0,"","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr4:84328498-84377036 (-) // 98.71 // q21.23"]
["11731163_at",-0.039267063,-0.021618843,-0.031831264,0.03354311,0.021618843,0.13240194,0.3801655,0.057990566,-1.0669016,-0.09342708,1.0669016,"down","VIPR2",7434.0,"0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007190 // activation of adenylate cyclase activity // inferred from electronic annotation /// 0007267 // cell-cell signaling // traceable author statement","0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004999 // vasoactive intestinal polypeptide receptor activity // inferred from electronic annotation","chr7:158820865-158937625 (-) // 90.98 // q36.3"]
["11760460_at",-0.22268558,0.026335001,-0.059879303,0.17235708,-0.026335001,0.12830496,0.5108346,0.13509215,-1.1304148,-0.17685232,1.1304148,"down","RBM48",84060.0,"","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation","chr7:92158108-92167318 (+) // 79.67 // q21.2"]
["11742173_x_at",-0.023944378,0.10420847,-0.40096664,0.067857265,-0.043630123,0.023944378,0.7840049,0.472133,-1.0889653,-0.122957975,1.0889653,"down","LST1",7940.0,"0000902 // cell morphogenesis // inferred from electronic annotation /// 0006955 // immune response // inferred from electronic annotation /// 0006955 // immune response // non-traceable author statement /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0009653 // anatomical structure morphogenesis // non-traceable author statement /// 0016358 // dendrite development // inferred from direct assay /// 0050672 // negative regulation of lymphocyte proliferation // inferred from direct assay","0000139 // Golgi membrane // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // non-traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation","","chr6:31553970-31556685 (+) // 76.27 // p21.33"]
["11755342_x_at",0.03845501,0.0025787354,0.124557495,-0.04151249,-0.0025787354,-0.044709206,0.4467137,0.093242265,1.0605386,0.084797196,1.0605386,"up","MIR1292 /// NOP56 /// SNORD110 /// SNORD57 /// SNORD86","100302138 /// 10528 /// 26792 /// 692201 /// 692213","0006364 // rRNA processing // traceable author statement /// 0008219 // cell death // inferred from electronic annotation /// 0042254 // ribosome biogenesis // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // traceable author statement /// 0005730 // nucleolus // inferred from electronic annotation /// 0005732 // small nucleolar ribonucleoprotein complex // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0031428 // box C/D snoRNP complex // non-traceable author statement /// 0070761 // pre-snoRNP complex // inferred from direct assay","0003723 // RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0030515 // snoRNA binding // inferred from direct assay","chr20:2633673-2639038 (+) // 94.05 // p13"]
["11759836_at",-0.18501878,0.24826145,0.00942564,-0.105427265,-0.0094258785,0.067790985,0.92699623,0.78213257,1.0280498,0.03991019,1.0280498,"up","RHOBTB1",9886.0,"0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation","chr10:62669074-62761198 (-) // 91.27 // q21.2"]
["11763682_at",-0.015502453,0.015502453,0.07810736,-0.115968704,-0.038068295,0.05829382,0.7201967,0.3700203,1.0409857,0.057950255,1.0409857,"up","ABCB9",23457.0,"0001916 // positive regulation of T cell mediated cytotoxicity // not recorded /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // inferred from direct assay /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0015833 // peptide transport // inferred from direct assay /// 0015833 // peptide transport // inferred from electronic annotation /// 0055085 // transmembrane transport // not recorded /// 0055085 // transmembrane transport // inferred from electronic annotation","0005743 // mitochondrial inner membrane // not recorded /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005886 // plasma membrane // not recorded /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030176 // integral to endoplasmic reticulum membrane // inferred from direct assay /// 0042825 // TAP complex // not recorded","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0015421 // oligopeptide-transporting ATPase activity // not recorded /// 0015440 // peptide-transporting ATPase activity // inferred from direct assay /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0022891 // substrate-specific transmembrane transporter activity // inferred from direct assay /// 0042288 // MHC class I protein binding // not recorded /// 0042605 // peptide antigen binding // not recorded /// 0042626 // ATPase activity, coupled to transmembrane movement of substances // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046978 // TAP1 binding // not recorded /// 0046979 // TAP2 binding // not recorded /// 0046980 // tapasin binding // not recorded","chr12:123465701-123466268 (-) // 69.12 // q24.31"]
["11739838_a_at",-0.050685406,0.08189297,-0.2991097,0.23398685,0.050685406,-0.16018629,0.7756134,0.45823288,-1.0948976,-0.13079599,1.0948976,"down","KDM5A",5927.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0019907 // cyclin-dependent protein kinase activating kinase holoenzyme complex // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from direct assay /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016702 // oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen // inferred from electronic annotation /// 0016706 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:389222-498620 (-) // 97.02 // p13.33"]
["11749221_a_at",-0.15997362,0.20314479,0.029940367,-0.029940367,-0.039782286,0.10753703,0.9759788,0.92352533,1.0081887,0.011765724,1.0081887,"up","SLC13A3",64849.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0006835 // dicarboxylic acid transport // inferred from electronic annotation /// 0015744 // succinate transport // inferred from electronic annotation /// 0015746 // citrate transport // inferred from electronic annotation /// 0015810 // aspartate transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0071422 // succinate transmembrane transport // inferred from electronic annotation","0005624 // membrane fraction // inferred from electronic annotation /// 0005626 // insoluble fraction // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation /// 0005310 // dicarboxylic acid transmembrane transporter activity // inferred from electronic annotation /// 0005343 // organic acid:sodium symporter activity // inferred from electronic annotation /// 0015137 // citrate transmembrane transporter activity // inferred from electronic annotation /// 0015141 // succinate transmembrane transporter activity // inferred from electronic annotation /// 0015183 // L-aspartate transmembrane transporter activity // inferred from electronic annotation /// 0015293 // symporter activity // inferred from electronic annotation /// 0015362 // high affinity sodium:dicarboxylate symporter activity // inferred from electronic annotation /// 0017153 // sodium:dicarboxylate symporter activity // inferred from electronic annotation","chr20:45187727-45217577 (-) // 99.76 // q13.12"]
["11752879_x_at",-0.07779741,0.1791172,-0.0030679703,0.072116375,-0.26657057,0.0030679703,0.79458547,0.49406558,1.0692105,0.09654595,1.0692105,"up","SMTN",6525.0,"0006939 // smooth muscle contraction // traceable author statement /// 0007517 // muscle organ development // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement","0003779 // actin binding // traceable author statement /// 0008307 // structural constituent of muscle // traceable author statement","chr22:31489353-31495776 (+) // 99.73 // q12.2"]
["11752272_a_at",0.011964798,-0.069853306,-0.053242683,0.046658516,-0.011965275,0.14769554,0.5158838,0.13802855,-1.07017,-0.09784005,1.07017,"down","MAN1B1",11253.0,"0006457 // protein folding // traceable author statement /// 0006486 // protein glycosylation // inferred from electronic annotation /// 0006487 // protein N-linked glycosylation // non-traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0009311 // oligosaccharide metabolic process // traceable author statement /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0030433 // ER-associated protein catabolic process // inferred from mutant phenotype /// 0030433 // ER-associated protein catabolic process // inferred from electronic annotation /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005624 // membrane fraction // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0044322 // endoplasmic reticulum quality control compartment // traceable author statement","0004571 // mannosyl-oligosaccharide 1,2-alpha-mannosidase activity // inferred from direct assay /// 0004571 // mannosyl-oligosaccharide 1,2-alpha-mannosidase activity // traceable author statement /// 0004571 // mannosyl-oligosaccharide 1,2-alpha-mannosidase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity, acting on glycosyl bonds // inferred from electronic annotation","chr9:139981532-140003349 (+) // 99.83 // q34.3"]
["11729722_a_at",-0.056418896,0.056418896,0.16778898,0.13083172,-0.13846493,-0.07421017,0.78129417,0.46784326,1.0593731,0.08321083,1.0593731,"up","PIAS2",9063.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0016925 // protein sumoylation // inferred from electronic annotation /// 0030521 // androgen receptor signaling pathway // non-traceable author statement /// 0045667 // regulation of osteoblast differentiation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // non-traceable author statement /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0060766 // negative regulation of androgen receptor signaling pathway // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0016604 // nuclear body // inferred from electronic annotation /// 0016605 // PML body // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008270 // zinc ion binding // traceable author statement /// 0016874 // ligase activity // inferred from electronic annotation /// 0019789 // SUMO ligase activity // inferred from direct assay /// 0031625 // ubiquitin protein ligase binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050681 // androgen receptor binding // non-traceable author statement","chr18:44390917-44497495 (-) // 95.99 // q21.1"]
["11716596_a_at",-0.12929535,-0.057019234,-0.059378624,0.057019234,0.062330246,0.06271744,0.14197254,0.0038917062,-1.1038826,-0.14258668,1.1038826,"down","SLC44A1",23446.0,"0006810 // transport // inferred from electronic annotation /// 0015871 // choline transport // traceable author statement /// 0015871 // choline transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement","0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0015220 // choline transmembrane transporter activity // traceable author statement /// 0015220 // choline transmembrane transporter activity // inferred from electronic annotation","chr9:108006905-108154490 (+) // 96.11 // q31.1"]
["11724916_at",0.23252678,0.1364212,0.24102306,-0.13642073,-0.21583843,-0.17633104,0.08459432,7.3118036E-4,1.3009093,0.37952036,1.3009093,"up","TMTC3",160418.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr12:88536072-88593664 (+) // 91.71 // q21.32"]
["11730024_a_at",0.0042598248,-0.047646284,-0.007637024,0.004557371,0.11428523,-0.0042598248,0.6322997,0.25169232,-1.0390047,-0.055202156,1.0390047,"down","TIMD4",91937.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr5:156346292-156390266 (-) // 97.16 // q33.3"]
["11748263_a_at",-0.12513399,0.092879534,-0.12007451,0.01570797,-0.01570797,0.1937561,0.67139125,0.30022654,-1.0832466,-0.11536169,1.0832466,"down","DCAF17",80067.0,"0016567 // protein ubiquitination // inferred by curator /// 0016567 // protein ubiquitination // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0080008 // CUL4-RING ubiquitin ligase complex // inferred from direct assay","","chr2:172290980-172337955 (+) // 97.2 // q31.1"]
["11725065_a_at",0.113264084,0.050868988,0.022983551,-0.13707018,-0.06796265,-0.022983551,0.30429602,0.031382367,1.1006668,0.13837774,1.1006668,"up","TCOF1",6949.0,"0001501 // skeletal system development // traceable author statement /// 0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005730 // nucleolus // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay","0005215 // transporter activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr5:149737201-149779869 (+) // 98.32 // q32"]
["11721667_a_at",-0.015701294,0.015701294,0.032484055,-0.06425619,-0.01800108,0.018942356,0.68327236,0.3162975,1.0223811,0.031933025,1.0223811,"up","CDT1",81620.0,"0000076 // DNA replication checkpoint // inferred from direct assay /// 0000076 // DNA replication checkpoint // inferred from electronic annotation /// 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000083 // regulation of transcription involved in G1/S phase of mitotic cell cycle // traceable author statement /// 0000084 // S phase of mitotic cell cycle // traceable author statement /// 0000216 // M/G1 transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006260 // DNA replication // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007090 // regulation of S phase of mitotic cell cycle // inferred from electronic annotation /// 0030174 // regulation of DNA-dependent DNA replication initiation // inferred from direct assay /// 0030174 // regulation of DNA-dependent DNA replication initiation // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement","0003677 // DNA binding // inferred from sequence or structural similarity /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr16:88870184-88875668 (+) // 75.44 // q24.3"]
["11746525_a_at",-0.017067432,0.01706791,0.105314255,0.027123451,-0.06111574,-0.07252741,0.6038906,0.21660508,1.0501617,0.070611514,1.0501617,"up","RBM48",84060.0,"","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation","chr7:92158108-92167318 (+) // 79.67 // q21.2"]
["11757212_at",-0.119898796,0.12407684,0.052131653,-0.052131653,0.2825408,-0.06650972,0.9346628,0.8037211,-1.0251701,-0.035863288,1.0251701,"down","FLJ36777",730971.0,"","","","chr4:7099150-7105103 (-) // 32.24 // p16.1"]
["11756058_a_at",-0.13249159,-0.00501585,-0.11349392,0.07742691,0.005016327,0.05277109,0.35101175,0.045999184,-1.0933373,-0.12873854,1.0933373,"down","CEACAM1",634.0,"0001525 // angiogenesis // non-traceable author statement /// 0007156 // homophilic cell adhesion // non-traceable author statement /// 0007229 // integrin-mediated signaling pathway // non-traceable author statement /// 0016477 // cell migration // non-traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005624 // membrane fraction // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr19:43015040-43025500 (-) // 67.97 // q13.2"]
["11740811_at",0.0,0.0,0.22593784,0.120790005,-0.072175026,-0.057571888,0.7810033,0.46724272,1.055772,0.07829823,1.055772,"up","TPSG1",25823.0,"0006508 // proteolysis // inferred from electronic annotation","0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // traceable author statement /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr16:1271653-1274775 (-) // 97.96 // p13.3"]
["11756144_s_at",0.039056778,0.032881737,0.015058517,-0.015058517,-0.049578667,-0.017396927,0.22012255,0.013164126,1.0398271,0.05634367,1.0398271,"up","EIF4B /// LOC100653227","100653227 /// 1975","0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0000289 // nuclear-transcribed mRNA poly(A) tail shortening // traceable author statement /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // traceable author statement /// 0006413 // translational initiation // inferred from electronic annotation /// 0006446 // regulation of translational initiation // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005829 // cytosol // traceable author statement /// 0016281 // eukaryotic translation initiation factor 4F complex // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0003743 // translation initiation factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr12:53434571-53435983 (+) // 92.76 // q13.13 /// chr7:104310589-104312009 (+) // 90.53 // q22.2"]
["11721232_s_at",-0.029283524,-0.17162037,-0.071545124,0.043315887,0.029283524,0.08216381,0.31374726,0.034196213,-1.1037428,-0.14240408,1.1037428,"down","METTL21D",79609.0,"0032259 // methylation // inferred from electronic annotation","","0008168 // methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr14:50575354-50583318 (-) // 98.2 // q21.3"]
["11761999_s_at",0.0589962,0.08098793,-0.10255766,-0.12501001,-0.006333351,0.006333351,0.7930979,0.49048343,1.038244,0.054145545,1.038244,"up","HDAC4",9759.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001501 // skeletal system development // inferred from electronic annotation /// 0002076 // osteoblast development // inferred from electronic annotation /// 0006338 // chromatin remodeling // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006954 // inflammatory response // traceable author statement /// 0007399 // nervous system development // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0010832 // negative regulation of myotube differentiation // inferred from mutant phenotype /// 0010882 // regulation of cardiac muscle contraction by calcium ion signaling // inferred from electronic annotation /// 0014894 // response to denervation involved in regulation of muscle adaptation // inferred from sequence or structural similarity /// 0014894 // response to denervation involved in regulation of muscle adaptation // inferred from electronic annotation /// 0014898 // cardiac muscle hypertrophy in response to stress // traceable author statement /// 0016568 // chromatin modification // inferred from electronic annotation /// 0016575 // histone deacetylation // inferred from direct assay /// 0016575 // histone deacetylation // inferred from mutant phenotype /// 0016575 // histone deacetylation // inferred from electronic annotation /// 0030183 // B cell differentiation // traceable author statement /// 0033235 // positive regulation of protein sumoylation // inferred from direct assay /// 0034983 // peptidyl-lysine deacetylation // inferred from direct assay /// 0042113 // B cell activation // traceable author statement /// 0043393 // regulation of protein binding // inferred from mutant phenotype /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // inferred from mutant phenotype /// 0045668 // negative regulation of osteoblast differentiation // inferred from electronic annotation /// 0045820 // negative regulation of glycolysis // inferred from sequence or structural similarity /// 0045820 // negative regulation of glycolysis // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from mutant phenotype /// 0070555 // response to interleukin-1 // inferred from mutant phenotype /// 0070932 // histone H3 deacetylation // inferred from direct assay /// 0070933 // histone H4 deacetylation // inferred from direct assay","0000118 // histone deacetylase complex // inferred from direct assay /// 0000118 // histone deacetylase complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0017053 // transcriptional repressor complex // inferred from direct assay /// 0031594 // neuromuscular junction // inferred from electronic annotation /// 0042641 // actomyosin // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003714 // transcription corepressor activity // inferred from electronic annotation /// 0004407 // histone deacetylase activity // inferred from direct assay /// 0004407 // histone deacetylase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0030955 // potassium ion binding // inferred from direct assay /// 0031078 // histone deacetylase activity (H3-K14 specific) // inferred from electronic annotation /// 0032041 // NAD-dependent histone deacetylase activity (H3-K14 specific) // inferred from electronic annotation /// 0032129 // histone deacetylase activity (H3-K9 specific) // inferred from electronic annotation /// 0033558 // protein deacetylase activity // inferred from direct assay /// 0033558 // protein deacetylase activity // inferred from electronic annotation /// 0033613 // activating transcription factor binding // inferred from physical interaction /// 0034739 // histone deacetylase activity (H4-K16 specific) // inferred from electronic annotation /// 0042826 // histone deacetylase binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0046969 // NAD-dependent histone deacetylase activity (H3-K9 specific) // inferred from electronic annotation /// 0046970 // NAD-dependent histone deacetylase activity (H4-K16 specific) // inferred from electronic annotation /// 0070491 // repressing transcription factor binding // inferred from physical interaction","chr2:240016194-240112752 (-) // 93.12 // q37.3"]
["11740171_s_at",0.008252144,-0.13967133,0.03853798,-0.0360775,0.031612396,-0.008252144,0.8795887,0.67129743,-1.0186944,-0.026721321,1.0186944,"down","PBRM1",55193.0,"0001890 // placenta development // inferred from electronic annotation /// 0006338 // chromatin remodeling // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007067 // mitosis // traceable author statement /// 0007507 // heart development // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0016568 // chromatin modification // inferred from electronic annotation","0000228 // nuclear chromosome // non-traceable author statement /// 0000776 // kinetochore // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // non-traceable author statement /// 0003682 // chromatin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr3:52579367-52718931 (-) // 96.62 // p21.1"]
["11730621_x_at",0.017489433,-0.024728775,0.098033905,0.06498909,-0.09341717,-0.017489433,0.7873173,0.4774909,1.0320914,0.04557071,1.0320914,"up","SCYL1",57410.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006890 // retrograde vesicle-mediated transport, Golgi to ER // inferred from direct assay /// 0016192 // vesicle-mediated transport // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from direct assay /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005801 // cis-Golgi network // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0030126 // COPI vesicle coat // inferred from direct assay /// 0030126 // COPI vesicle coat // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // non-traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr11:65292547-65306182 (+) // 97.49 // q13.1"]
["11729075_s_at",-0.08954382,0.1047616,-0.073403835,-0.03171587,0.21970701,0.03171587,0.73788023,0.39740515,-1.066313,-0.09263102,1.066313,"down","LTC4S /// MAML1","4056 /// 9794","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006691 // leukotriene metabolic process // inferred from direct assay /// 0006691 // leukotriene metabolic process // inferred from electronic annotation /// 0006692 // prostanoid metabolic process // traceable author statement /// 0006750 // glutathione biosynthetic process // not recorded /// 0007219 // Notch signaling pathway // inferred from direct assay /// 0007219 // Notch signaling pathway // traceable author statement /// 0007219 // Notch signaling pathway // inferred from electronic annotation /// 0010035 // response to inorganic substance // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0010831 // positive regulation of myotube differentiation // inferred from genetic interaction /// 0010831 // positive regulation of myotube differentiation // inferred from electronic annotation /// 0019370 // leukotriene biosynthetic process // traceable author statement /// 0019370 // leukotriene biosynthetic process // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0043085 // positive regulation of catalytic activity // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0045445 // myoblast differentiation // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048678 // response to axon injury // inferred from electronic annotation /// 0051149 // positive regulation of muscle cell differentiation // inferred from electronic annotation /// 0071222 // cellular response to lipopolysaccharide // inferred from electronic annotation /// 0071299 // cellular response to vitamin A // inferred from electronic annotation","0002193 // MAML1-RBP-Jkappa- ICN1 complex // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from direct assay /// 0005635 // nuclear envelope // traceable author statement /// 0005640 // nuclear outer membrane // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005792 // microsome // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0016607 // nuclear speck // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0003713 // transcription coactivator activity // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from electronic annotation /// 0004364 // glutathione transferase activity // not recorded /// 0004464 // leukotriene-C4 synthase activity // inferred from direct assay /// 0004464 // leukotriene-C4 synthase activity // traceable author statement /// 0004464 // leukotriene-C4 synthase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008047 // enzyme activator activity // inferred from electronic annotation /// 0008289 // lipid binding // inferred from direct assay /// 0008289 // lipid binding // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0042605 // peptide antigen binding // inferred from physical interaction /// 0043295 // glutathione binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr5:179220986-179223513 (+) // 91.23 // q35.3"]
["11715959_a_at",0.07319832,0.06695938,0.015374184,-0.034028053,-0.06686401,-0.015374184,0.2515461,0.01876593,1.0648124,0.090599306,1.0648124,"up","SREBF1",6720.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0003062 // regulation of heart rate by chemical signal // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006629 // lipid metabolic process // traceable author statement /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0008202 // steroid metabolic process // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // inferred from electronic annotation /// 0008610 // lipid biosynthetic process // inferred from sequence or structural similarity /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0009267 // cellular response to starvation // inferred from sequence or structural similarity /// 0009267 // cellular response to starvation // inferred from electronic annotation /// 0009749 // response to glucose stimulus // inferred from electronic annotation /// 0010867 // positive regulation of triglyceride biosynthetic process // inferred from sequence or structural similarity /// 0010867 // positive regulation of triglyceride biosynthetic process // inferred from electronic annotation /// 0019217 // regulation of fatty acid metabolic process // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0031065 // positive regulation of histone deacetylation // inferred from electronic annotation /// 0032094 // response to food // inferred from electronic annotation /// 0032526 // response to retinoic acid // inferred from electronic annotation /// 0032570 // response to progesterone stimulus // inferred from electronic annotation /// 0032869 // cellular response to insulin stimulus // inferred from electronic annotation /// 0033762 // response to glucagon stimulus // inferred from electronic annotation /// 0033993 // response to lipid // inferred from electronic annotation /// 0035104 // positive regulation of transcription via sterol regulatory element binding // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0043434 // response to peptide hormone stimulus // inferred from electronic annotation /// 0045542 // positive regulation of cholesterol biosynthetic process // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046676 // negative regulation of insulin secretion // inferred from electronic annotation /// 0050796 // regulation of insulin secretion // inferred from electronic annotation /// 0051591 // response to cAMP // inferred from electronic annotation /// 0070542 // response to fatty acid // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005635 // nuclear envelope // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0012507 // ER to Golgi transport vesicle membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0044444 // cytoplasmic part // inferred from sequence or structural similarity /// 0044444 // cytoplasmic part // inferred from electronic annotation","0003677 // DNA binding // inferred from sequence or structural similarity /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0032810 // sterol response element binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr17:17714662-17740325 (-) // 99.28 // p11.2"]
["11724500_at",-0.12241125,0.03203106,-0.13670444,0.15557337,-0.032031536,0.14878178,0.47817633,0.111589,-1.1223086,-0.16646944,1.1223086,"down","CRYBB1",1414.0,"0007601 // visual perception // traceable author statement","","0005212 // structural constituent of eye lens // inferred from electronic annotation","chr22:26995244-27014042 (-) // 93.8 // q12.1"]
["11731104_a_at",0.09374905,0.015431166,-0.015431404,-0.024806261,-0.061410666,0.0906713,0.8585239,0.6242831,1.0208457,0.029764751,1.0208457,"up","ATF7",11016.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0034399 // nuclear periphery // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation /// 0051019 // mitogen-activated protein kinase binding // inferred from direct assay","chr12:53905077-54020199 (-) // 94.86 // q13.13"]
["11738473_s_at",0.028643847,0.074243546,0.074243546,-0.028643608,-0.044486284,-0.118682384,0.24719441,0.017740747,1.0889827,0.122981034,1.0889827,"up","SLCO1B3 /// SLCO1B7","28234 /// 338821","0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0008206 // bile acid metabolic process // traceable author statement /// 0015711 // organic anion transport // traceable author statement /// 0015721 // bile acid and bile salt transport // traceable author statement /// 0043252 // sodium-independent organic anion transport // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation /// 0008514 // organic anion transmembrane transporter activity // traceable author statement","chr12:20968672-21243040 (+) // 99.95 // p12.2"]
["11754001_a_at",-0.11551523,0.16854334,-0.06993294,0.06993294,0.18607092,-0.09950352,0.87381464,0.65770704,-1.0408785,-0.057801723,1.0408785,"down","SUN3",256979.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0034993 // SUN-KASH complex // inferred from electronic annotation","","chr7:48026874-48048660 (-) // 75.73 // p12.3"]
["11727996_a_at",-0.06965113,0.015231371,0.057299376,-0.027860641,0.04860258,-0.015231371,0.9954398,0.98512167,-1.0006081,-8.7701686E-4,1.0006081,"down","MYEF2",50804.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0007518 // myoblast cell fate determination // traceable author statement /// 0014902 // myotube differentiation // inferred from expression pattern /// 0030182 // neuron differentiation // inferred from expression pattern","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003713 // transcription coactivator activity // traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation","chr15:48431624-48470714 (-) // 89.47 // q21.1"]
["11758912_at",-0.030966043,0.030966043,0.05223751,-0.14066124,0.12480092,-0.08503556,0.83686423,0.578779,1.0360147,0.051044438,1.0360147,"up","CLEC1A",51267.0,"0006952 // defense response // traceable author statement /// 0007166 // cell surface receptor signaling pathway // traceable author statement","0005622 // intracellular // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004888 // transmembrane signaling receptor activity // traceable author statement /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr12:10222153-10251664 (-) // 92.63 // p13.2"]
["11754563_a_at",-0.06101966,0.08638024,-0.019780397,0.05758691,-0.0051493645,0.0051493645,0.90796757,0.73630023,-1.0120885,-0.017335502,1.0120885,"down","CCBE1",147372.0,"0001525 // angiogenesis // inferred from electronic annotation /// 0001946 // lymphangiogenesis // inferred from mutant phenotype /// 0001946 // lymphangiogenesis // inferred from sequence or structural similarity /// 0002040 // sprouting angiogenesis // inferred from sequence or structural similarity /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0048845 // venous blood vessel morphogenesis // inferred from sequence or structural similarity","0005576 // extracellular region // inferred from electronic annotation /// 0005581 // collagen // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr18:57101163-57122178 (-) // 85.81 // q21.32"]
["11750405_a_at",-0.03746748,0.021291971,-0.1838255,-0.021291971,0.08056259,0.06976223,0.5729171,0.1872045,-1.0789874,-0.10967796,1.0789874,"down","LRIG1",26018.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr3:66430648-66454834 (-) // 100.0 // p14.1"]
["11728677_a_at",-0.15307426,-0.09084034,-0.08476448,0.09833813,0.08476448,0.10460377,0.08459432,8.116769E-4,-1.1530554,-0.20546186,1.1530554,"down","CES2",8824.0,"0009056 // catabolic process // traceable author statement","0005783 // endoplasmic reticulum // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // inferred from electronic annotation","0004091 // carboxylesterase activity // not recorded /// 0004091 // carboxylesterase activity // inferred from electronic annotation /// 0004091 // carboxylesterase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0047374 // methylumbelliferyl-acetate deacetylase activity // inferred from electronic annotation /// 0050253 // retinyl-palmitate esterase activity // inferred from electronic annotation /// 0080030 // methyl indole-3-acetate esterase activity // inferred from electronic annotation /// 0080031 // methyl salicylate esterase activity // inferred from electronic annotation /// 0080032 // methyl jasmonate esterase activity // inferred from electronic annotation","chr16:66968127-66978999 (+) // 86.1 // q22.1"]
["11741438_a_at",-5.853176E-4,-0.16360426,0.224653,-0.03014803,5.853176E-4,0.14492679,0.9641866,0.8905379,-1.0127655,-0.018300204,1.0127655,"down","CLGN",1047.0,"0006457 // protein folding // inferred from electronic annotation /// 0006461 // protein complex assembly // inferred from electronic annotation /// 0007338 // single fertilization // traceable author statement /// 0007339 // binding of sperm to zona pellucida // inferred from electronic annotation","0005635 // nuclear envelope // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // traceable author statement","chr4:141309608-141348815 (-) // 98.8 // q31.1"]
["11752073_a_at",0.09360361,-0.04585123,0.024879932,-0.024879932,0.19098854,-0.162575,0.94921565,0.8450517,1.0160934,0.023032984,1.0160934,"up","C20orf194",25943.0,"","","","chr20:3233025-3321608 (-) // 96.08 // p13"]
["11762924_at",0.06981063,0.060337782,-0.060337782,-0.10085964,-0.15330505,0.20152283,0.9121542,0.7473392,1.0286965,0.040817454,1.0286965,"up","GUSBP1 /// GUSBP4","375513 /// 728411","0005975 // carbohydrate metabolic process // inferred from electronic annotation","","0003824 // catalytic activity // inferred from electronic annotation /// 0004553 // hydrolase activity, hydrolyzing O-glycosyl compounds // inferred from electronic annotation /// 0043169 // cation binding // inferred from electronic annotation","chr5:21459782-21544886 (+) // 78.56 // p14.3"]
["11736663_s_at",-0.32622194,-0.0046043396,0.0046048164,0.0126514435,0.0126514435,-0.0764637,0.7777433,0.4617649,-1.0656154,-0.09168686,1.0656154,"down","ZNF354B",117608.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr5:178286953-178312411 (+) // 94.98 // q35.3"]
["11730441_a_at",-0.0116763115,-0.0022292137,0.009935379,0.1015439,0.0022292137,-0.04883194,0.884607,0.68240124,-1.0137044,-0.019637045,1.0137044,"down","FAM155A",728215.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr13:107820882-108519460 (-) // 91.07 // q33.3"]
["11736496_a_at",-0.07341242,0.0047445297,-0.0855937,-0.0011882782,0.014321327,0.0011878014,0.49463806,0.12192961,-1.0397193,-0.056194145,1.0397193,"down","TNRC6B",23112.0,"0006417 // regulation of translation // inferred from electronic annotation /// 0007219 // Notch signaling pathway // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0031047 // gene silencing by RNA // inferred from electronic annotation","0000932 // cytoplasmic mRNA processing body // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation","chr22:40573928-40731809 (+) // 95.57 // q13.1"]
["11761536_a_at",0.069037676,0.0556612,0.1877718,-0.0964849,-0.21017861,-0.0556612,0.26933524,0.02272105,1.168722,0.22493184,1.168722,"up","TM2D3",80213.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr15:102173275-102192579 (-) // 53.12 // q26.3"]
["11717140_a_at",-0.04034424,-0.05736065,-0.015211105,0.025235176,0.015211105,0.029367447,0.19049868,0.00926913,-1.0431235,-0.060909953,1.0431235,"down","COG4",25839.0,"0006810 // transport // inferred from electronic annotation /// 0006890 // retrograde vesicle-mediated transport, Golgi to ER // inferred from mutant phenotype /// 0007030 // Golgi organization // inferred from mutant phenotype /// 0015031 // protein transport // inferred from electronic annotation /// 0048213 // Golgi vesicle prefusion complex stabilization // inferred from mutant phenotype","0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0017119 // Golgi transport complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr16:70514471-70557469 (-) // 96.28 // q22.1"]
["11746053_x_at",0.01931715,-0.01931715,-0.088853836,0.244771,0.09969044,-0.11241341,0.7255764,0.3797508,-1.076962,-0.10696734,1.076962,"down","LOC100132999 /// LOC642441 /// LOC730256","100132999 /// 642441 /// 730256","","","","chr1:147930935-147932645 (+) // 93.82 // q21.2 /// chr1:144339737-144341456 (+) // 93.42 // q21.1 /// chr1:143743412-143745117 (+) // 93.36 // q21.1 /// chr1:144519986-144521705 (+) // 94.46 // q21.1 /// chr1:149575781-149577488 (-) // 93.24 // q21.2"]
["11716894_x_at",0.046726227,-0.035093307,0.0070667267,-0.0070667267,-0.114611626,0.019169807,0.7647365,0.44075206,1.0284009,0.040402774,1.0284009,"up","TOX4",9878.0,"","0000785 // chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0072357 // PTW/PP1 phosphatase complex // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr14:21945334-21967321 (+) // 85.86 // q11.2"]
["11743006_x_at",-0.14576626,-0.20807934,-0.018657684,0.1468668,0.35094166,0.018657684,0.3773196,0.056754075,-1.2280108,-0.2963232,1.2280108,"down","RECQL",5965.0,"0000733 // DNA strand renaturation // inferred from direct assay /// 0006260 // DNA replication // inferred from electronic annotation /// 0006281 // DNA repair // inferred from electronic annotation /// 0006281 // DNA repair // traceable author statement /// 0006310 // DNA recombination // inferred from electronic annotation /// 0032508 // DNA duplex unwinding // inferred from direct assay /// 0032508 // DNA duplex unwinding // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0015630 // microtubule cytoskeleton // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0000739 // DNA strand annealing activity // inferred from direct assay /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003678 // DNA helicase activity // inferred from direct assay /// 0003678 // DNA helicase activity // traceable author statement /// 0004003 // ATP-dependent DNA helicase activity // traceable author statement /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0043140 // ATP-dependent 3'-5' DNA helicase activity // inferred from electronic annotation","chr12:21621843-21654603 (-) // 86.96 // p12.1"]
["11728736_at",-0.21062279,0.07551479,0.087472916,0.017781734,-0.017781734,-0.021460056,0.9795837,0.933495,-1.0060661,-0.008725072,1.0060661,"down","ZBTB38",253461.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from sequence or structural similarity /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:141043054-141168630 (+) // 92.23 // q23"]
["11729670_a_at",8.7070465E-4,0.22560453,0.07457399,-0.19322348,-0.08938742,-8.7070465E-4,0.43653503,0.087144434,1.1446,0.19484355,1.1446,"up","BDH1",622.0,"0001889 // liver development // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0007584 // response to nutrient // inferred from electronic annotation /// 0008152 // metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0009636 // response to toxin // inferred from electronic annotation /// 0009725 // response to hormone stimulus // inferred from electronic annotation /// 0032355 // response to estradiol stimulus // inferred from electronic annotation /// 0032868 // response to insulin stimulus // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042594 // response to starvation // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045471 // response to ethanol // inferred from electronic annotation /// 0046686 // response to cadmium ion // inferred from electronic annotation /// 0046950 // cellular ketone body metabolic process // traceable author statement /// 0046951 // ketone body biosynthetic process // traceable author statement /// 0046952 // ketone body catabolic process // traceable author statement /// 0051412 // response to corticosterone stimulus // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0060416 // response to growth hormone stimulus // inferred from electronic annotation /// 0060612 // adipose tissue development // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005759 // mitochondrial matrix // non-traceable author statement /// 0005759 // mitochondrial matrix // traceable author statement /// 0005759 // mitochondrial matrix // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0003858 // 3-hydroxybutyrate dehydrogenase activity // inferred from direct assay /// 0003858 // 3-hydroxybutyrate dehydrogenase activity // traceable author statement /// 0003858 // 3-hydroxybutyrate dehydrogenase activity // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation","chr3:197236653-197282858 (-) // 83.31 // q29"]
["11755969_a_at",1.2397766E-4,-0.026591778,0.0074706078,0.053121567,-0.062401295,-1.2350082E-4,0.97890264,0.9314931,-1.0022191,-0.00319791,1.0022191,"down","NUCB1",4924.0,"","0005615 // extracellular space // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation","chr19:49403568-49426522 (+) // 91.33 // q13.33"]
["11757132_at",-0.1890521,-0.09919119,0.09919119,0.49727345,-0.15330625,0.14986849,0.6944022,0.33185622,-1.1709093,-0.2276293,1.1709093,"down","SNORA29 /// TCP1","677812 /// 6950","0006457 // protein folding // traceable author statement /// 0006457 // protein folding // inferred from electronic annotation /// 0007021 // tubulin complex assembly // non-traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0044267 // cellular protein metabolic process // inferred from electronic annotation /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement","0000242 // pericentriolar material // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005720 // nuclear heterochromatin // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005832 // chaperonin-containing T-complex // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0030054 // cell junction // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // traceable author statement","chr6:160206625-160206765 (-) // 100.0 // q25.3"]
["11735068_a_at",-0.084163666,0.07488775,0.0034923553,-0.0034923553,-0.056089878,0.07080126,0.9775041,0.9279831,-1.0039362,-0.005667548,1.0039362,"down","CES3",23491.0,"","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // inferred from electronic annotation","0004091 // carboxylesterase activity // not recorded /// 0004091 // carboxylesterase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0050253 // retinyl-palmitate esterase activity // inferred from electronic annotation /// 0080030 // methyl indole-3-acetate esterase activity // inferred from electronic annotation /// 0080031 // methyl salicylate esterase activity // inferred from electronic annotation /// 0080032 // methyl jasmonate esterase activity // inferred from electronic annotation","chr16:66995137-67008496 (+) // 64.14 // q22.1"]
["11759308_s_at",0.03755188,-0.007514477,-0.013331413,0.0796957,-0.07661915,0.007514477,0.9902422,0.96812665,1.0014138,0.0020382737,1.0014138,"up","MAGI1",9223.0,"0006461 // protein complex assembly // non-traceable author statement /// 0007155 // cell adhesion // traceable author statement /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005911 // cell-cell junction // traceable author statement /// 0005923 // tight junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0042995 // cell projection // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008022 // protein C-terminus binding // traceable author statement /// 0016301 // kinase activity // inferred from electronic annotation /// 0051393 // alpha-actinin binding // inferred from physical interaction","chr3:65339200-66024528 (-) // 97.62 // p14.1"]
["200041_PM_s_at",0.019831657,0.03050232,0.08735275,-0.034534454,-0.068805695,-0.019831657,0.28703088,0.026991768,1.0621245,0.08695287,1.0621245,"up","ATP6V1G2-DDX39B /// DDX39B /// SNORD84","100532737 /// 692199 /// 7919","0000245 // spliceosomal complex assembly // inferred from direct assay /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred from genetic interaction /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // inferred from direct assay /// 0006406 // mRNA export from nucleus // inferred from genetic interaction /// 0006810 // transport // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from direct assay /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010501 // RNA secondary structure unwinding // inferred from direct assay /// 0015992 // proton transport // inferred from electronic annotation /// 0046784 // intronless viral mRNA export from host nucleus // inferred from direct assay /// 0051028 // mRNA transport // inferred from electronic annotation","0000346 // transcription export complex // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005681 // spliceosomal complex // inferred from direct assay /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005687 // U4 snRNP // inferred from direct assay /// 0005688 // U6 snRNP // inferred from direct assay /// 0016471 // vacuolar proton-transporting V-type ATPase complex // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0004004 // ATP-dependent RNA helicase activity // inferred from direct assay /// 0004004 // ATP-dependent RNA helicase activity // traceable author statement /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0008186 // RNA-dependent ATPase activity // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016820 // hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances // inferred from electronic annotation /// 0017070 // U6 snRNA binding // inferred from direct assay /// 0030621 // U4 snRNA binding // inferred from direct assay /// 0043008 // ATP-dependent protein binding // inferred from direct assay","chr6:31498022-31509756 (-) // 98.67 // p21.33"]
["11762442_at",0.038868904,0.021367311,-0.0045392513,0.004539013,-0.050844193,-0.18399596,0.55639935,0.17179218,1.0683117,0.09533263,1.0683117,"up",-0.0045392513,"","","0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007218 // neuropeptide signaling pathway // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation"]
["11725616_at",0.03528595,0.04972744,0.11893082,-0.08354092,-0.03528595,-0.038829803,0.23832183,0.01611353,1.0871369,0.12053358,1.0871369,"up","PPP1CB",5500.0,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0005977 // glycogen metabolic process // inferred from electronic annotation /// 0005979 // regulation of glycogen biosynthetic process // inferred from electronic annotation /// 0005981 // regulation of glycogen catabolic process // inferred from electronic annotation /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0006629 // lipid metabolic process // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0019433 // triglyceride catabolic process // traceable author statement /// 0030155 // regulation of cell adhesion // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement /// 0051301 // cell division // inferred from electronic annotation","0000164 // protein phosphatase type 1 complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0042587 // glycogen granule // inferred from electronic annotation /// 0070688 // MLL5-L complex // inferred from direct assay /// 0072357 // PTW/PP1 phosphatase complex // inferred from direct assay","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004722 // protein serine/threonine phosphatase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0017018 // myosin phosphatase activity // inferred from sequence or structural similarity /// 0019901 // protein kinase binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050115 // myosin-light-chain-phosphatase activity // inferred from direct assay /// 0050115 // myosin-light-chain-phosphatase activity // inferred from electronic annotation","chr2:28974625-29025806 (+) // 94.87 // p23.2"]
["11750195_a_at",0.006860256,-0.015852451,0.034302235,-0.006860733,-0.043853283,0.080976486,0.99055874,0.9688691,-1.0011449,-0.0016507766,1.0011449,"down","UEVLD",55293.0,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006464 // cellular protein modification process // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0044262 // cellular carbohydrate metabolic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016616 // oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor // inferred from electronic annotation","chr11:18553758-18610281 (-) // 92.77 // p15.1"]
["11718231_x_at",-0.053154945,-0.12350559,5.044937E-4,0.0344553,-5.044937E-4,0.03730774,0.44998035,0.09521864,-1.0588304,-0.0824715,1.0588304,"down","HLA-F",3134.0,"0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // inferred from electronic annotation /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0002480 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-independent // traceable author statement /// 0006955 // immune response // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0019882 // antigen processing and presentation // inferred from electronic annotation /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0050776 // regulation of immune response // traceable author statement /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060337 // type I interferon-mediated signaling pathway // traceable author statement","0000139 // Golgi membrane // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0012507 // ER to Golgi transport vesicle membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030670 // phagocytic vesicle membrane // traceable author statement /// 0031901 // early endosome membrane // traceable author statement /// 0042612 // MHC class I protein complex // inferred from electronic annotation /// 0071556 // integral to lumenal side of endoplasmic reticulum membrane // traceable author statement","0032393 // MHC class I receptor activity // traceable author statement","chr6:29691060-29694303 (+) // 95.16 // p22.1"]
["11758074_s_at",0.017634392,0.269742,-0.028945446,0.08719921,-0.08016348,-0.017634392,0.76465803,0.440566,1.0641316,0.0896766,1.0641316,"up","VGLL3",389136.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","","chr3:86987124-86987686 (-) // 76.69 // p12.1"]
["11750924_a_at",0.05846238,0.016874313,-0.016874552,0.077430725,-0.0380373,-0.1717012,0.76704484,0.44542655,1.045063,0.06358994,1.045063,"up","THSD7B",80731.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr2:137523114-138421130 (+) // 99.95 // q22.1"]
["11753093_a_at",-0.14212704,0.11366582,-0.07461095,0.10597515,-0.07461095,0.07461095,0.7995137,0.50249827,-1.0494857,-0.06968249,1.0494857,"down","TPTE2P1",646405.0,"","","","chr13:25508129-25525628 (-) // 66.61 // q12.13"]
["11723787_x_at",0.07022095,-0.08955288,-0.033141136,0.13182688,-0.076128006,0.033141136,0.8332911,0.56957465,-1.0331892,-0.047104437,1.0331892,"down","ZNF766",90321.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:52772832-52795972 (+) // 75.01 // q13.41"]
["11747119_a_at",-0.18939447,-0.049138546,0.076672554,-0.09244323,0.063308716,0.049138784,0.821256,0.5439792,-1.042915,-0.06062156,1.042915,"down","RGMA",56963.0,"0007411 // axon guidance // traceable author statement","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031225 // anchored to membrane // inferred from electronic annotation","","chr15:93586645-93617216 (-) // 99.71 // q26.1"]
["11736697_x_at",-0.024559021,-0.03988886,0.10274124,0.11340475,0.024558544,-0.029650688,0.9018523,0.7235992,-1.0163095,-0.023339817,1.0163095,"down","ERN2",10595.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from mutant phenotype /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0016075 // rRNA catabolic process // inferred from direct assay /// 0016310 // phosphorylation // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from mutant phenotype","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from direct assay /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004519 // endonuclease activity // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016891 // endoribonuclease activity, producing 5'-phosphomonoesters // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:23701628-23724821 (-) // 91.88 // p12.2"]
["11746250_a_at",-0.20106125,0.02464056,-0.1557138,0.041320324,0.016438484,-0.016438723,0.5364182,0.15411095,-1.0901184,-0.124484845,1.0901184,"down","C1orf88",128344.0,"0030030 // cell projection organization // inferred from electronic annotation /// 0031344 // regulation of cell projection organization // inferred from sequence or structural similarity /// 0031344 // regulation of cell projection organization // inferred from electronic annotation /// 0033674 // positive regulation of kinase activity // inferred from mutant phenotype","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from sequence or structural similarity /// 0005802 // trans-Golgi network // inferred from electronic annotation /// 0005932 // microtubule basal body // inferred from sequence or structural similarity /// 0005932 // microtubule basal body // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0017137 // Rab GTPase binding // inferred from physical interaction /// 0017137 // Rab GTPase binding // inferred from electronic annotation /// 0019894 // kinesin binding // inferred from physical interaction /// 0019894 // kinesin binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0043015 // gamma-tubulin binding // inferred from direct assay /// 0043015 // gamma-tubulin binding // inferred from electronic annotation /// 0048487 // beta-tubulin binding // inferred from direct assay /// 0048487 // beta-tubulin binding // inferred from electronic annotation","chr1:111889217-111895612 (+) // 96.27 // p13.2"]
["11761935_at",-0.040872097,-0.12382269,0.019798279,0.019798279,-0.019798279,0.036850452,0.63029295,0.2483912,-1.0428866,-0.060582314,1.0428866,"down","HNRPLL",92906.0,"0006397 // mRNA processing // inferred from electronic annotation /// 0033120 // positive regulation of RNA splicing // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003729 // mRNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction","chr2:38808216-38830071 (-) // 90.3 // p22.1"]
["11737738_at",0.18470931,-0.004876137,0.023648262,0.004876137,-0.0118768215,-0.16926813,0.5792407,0.19311169,1.0917053,0.12658349,1.0917053,"up","AADACL4",343066.0,"0008152 // metabolic process // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004091 // carboxylesterase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr1:12704565-12727097 (+) // 99.94 // p36.21"]
["11741671_a_at",-0.083026886,0.16627741,-0.23875046,0.029698372,0.16515064,-0.029698372,0.7775848,0.4612896,-1.0768994,-0.106883496,1.0768994,"down","CCDC36",339834.0,"","","","chr3:49236932-49295537 (+) // 100.0 // p21.31"]
["11725055_at",0.045250416,-0.07791424,0.3262825,-0.08264685,0.18339777,-0.045250416,0.8543118,0.61480355,1.0565586,0.07937279,1.0565586,"up","HNMT",3176.0,"0002347 // response to tumor cell // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0006972 // hyperosmotic response // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0007585 // respiratory gaseous exchange // traceable author statement /// 0014075 // response to amine stimulus // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation /// 0042220 // response to cocaine // inferred from electronic annotation /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation /// 0070555 // response to interleukin-1 // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation","0008168 // methyltransferase activity // inferred from electronic annotation /// 0008170 // N-methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0046539 // histamine N-methyltransferase activity // inferred from electronic annotation","chr2:138721807-138774388 (+) // 88.1 // q22.1"]
["11747530_a_at",-0.0055065155,-0.048995018,0.09526825,0.0055065155,-0.021017075,0.023861885,0.94051844,0.820752,1.0075177,0.0108051775,1.0075177,"up","CSNK2B",1460.0,"0007165 // signal transduction // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0010862 // positive regulation of pathway-restricted SMAD protein phosphorylation // inferred from direct assay /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0032927 // positive regulation of activin receptor signaling pathway // inferred from mutant phenotype /// 0033211 // adiponectin-mediated signaling pathway // inferred from direct assay /// 0043537 // negative regulation of blood vessel endothelial cell migration // inferred from direct assay /// 0043623 // cellular protein complex assembly // non-traceable author statement /// 0045859 // regulation of protein kinase activity // non-traceable author statement /// 0045859 // regulation of protein kinase activity // inferred from electronic annotation /// 0051101 // regulation of DNA binding // non-traceable author statement /// 0061154 // endothelial tube morphogenesis // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005956 // protein kinase CK2 complex // inferred from electronic annotation /// 0005956 // protein kinase CK2 complex // non-traceable author statement /// 0031519 // PcG protein complex // inferred from direct assay","0004674 // protein serine/threonine kinase activity // traceable author statement /// 0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0016301 // kinase activity // inferred from electronic annotation /// 0019887 // protein kinase regulator activity // inferred from electronic annotation /// 0019887 // protein kinase regulator activity // non-traceable author statement /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:31634608-31637700 (+) // 96.33 // p21.33"]
["11715323_s_at",0.019562244,0.008103371,-0.008102894,-0.08672857,0.13223982,-0.09744549,0.9209447,0.76736027,1.0166565,0.02383234,1.0166565,"up","NKX1-2",390010.0,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr10:126135997-126138550 (-) // 92.69 // q26.13"]
["11738113_at",-0.027479172,-0.11340976,-0.11245823,0.06087184,0.027479172,0.037352085,0.22428143,0.0138124125,-1.0915288,-0.12635016,1.0915288,"down","PCDHB1",29930.0,"0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr5:140430719-140433547 (+) // 100.0 // q31.3"]
["11727139_at",-0.17157602,0.009206295,-0.009206533,0.1332438,-0.056856632,0.15546846,0.590295,0.20341271,-1.097695,-0.13447724,1.097695,"down","MYH7B",57644.0,"","0016020 // membrane // inferred from electronic annotation /// 0016459 // myosin complex // inferred from electronic annotation /// 0032982 // myosin filament // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003774 // motor activity // inferred from electronic annotation /// 0003779 // actin binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation","chr20:33543703-33590240 (+) // 96.28 // q11.22"]
["11732018_a_at",-0.020696163,-0.03133011,0.020696163,-0.079170704,0.028036118,0.067941666,0.91276467,0.7484689,-1.0111841,-0.016045678,1.0111841,"down","HMGCLL1",54511.0,"0008152 // metabolic process // inferred from electronic annotation","","0003824 // catalytic activity // inferred from electronic annotation /// 0004419 // hydroxymethylglutaryl-CoA lyase activity // inferred from sequence or structural similarity /// 0004419 // hydroxymethylglutaryl-CoA lyase activity // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:55299170-55444012 (-) // 95.63 // p12.1"]
["11751670_a_at",0.030443668,0.055016994,-0.030443668,-0.116405964,0.15249729,-0.13458443,0.85790783,0.62304753,1.0361049,0.0511701,1.0361049,"up","G6PC",2538.0,"0005975 // carbohydrate metabolic process // traceable author statement /// 0005977 // glycogen metabolic process // traceable author statement /// 0005977 // glycogen metabolic process // inferred from electronic annotation /// 0005980 // glycogen catabolic process // inferred from electronic annotation /// 0006094 // gluconeogenesis // inferred from electronic annotation /// 0006094 // gluconeogenesis // inferred from mutant phenotype /// 0006641 // triglyceride metabolic process // inferred from electronic annotation /// 0008202 // steroid metabolic process // inferred from electronic annotation /// 0008645 // hexose transport // traceable author statement /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0015758 // glucose transport // traceable author statement /// 0015760 // glucose-6-phosphate transport // inferred from electronic annotation /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0042593 // glucose homeostasis // inferred from mutant phenotype /// 0042593 // glucose homeostasis // inferred from electronic annotation /// 0042632 // cholesterol homeostasis // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046415 // urate metabolic process // inferred from electronic annotation /// 0051156 // glucose 6-phosphate metabolic process // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030176 // integral to endoplasmic reticulum membrane // traceable author statement","0003824 // catalytic activity // inferred from electronic annotation /// 0004346 // glucose-6-phosphatase activity // inferred from direct assay /// 0004346 // glucose-6-phosphatase activity // inferred from electronic annotation /// 0016773 // phosphotransferase activity, alcohol group as acceptor // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042301 // phosphate ion binding // inferred from mutant phenotype","chr17:41052813-41063353 (+) // 99.7 // q21.31"]
["11746720_a_at",-0.029667854,-0.12722969,-0.0028934479,0.0028939247,0.01918888,0.0041327477,0.564262,0.17938095,-1.0439135,-0.06200215,1.0439135,"down","PPP1CB",5500.0,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0005977 // glycogen metabolic process // inferred from electronic annotation /// 0005979 // regulation of glycogen biosynthetic process // inferred from electronic annotation /// 0005981 // regulation of glycogen catabolic process // inferred from electronic annotation /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0006629 // lipid metabolic process // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0019433 // triglyceride catabolic process // traceable author statement /// 0030155 // regulation of cell adhesion // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement /// 0051301 // cell division // inferred from electronic annotation","0000164 // protein phosphatase type 1 complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0042587 // glycogen granule // inferred from electronic annotation /// 0070688 // MLL5-L complex // inferred from direct assay /// 0072357 // PTW/PP1 phosphatase complex // inferred from direct assay","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004722 // protein serine/threonine phosphatase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0017018 // myosin phosphatase activity // inferred from sequence or structural similarity /// 0019901 // protein kinase binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050115 // myosin-light-chain-phosphatase activity // inferred from direct assay /// 0050115 // myosin-light-chain-phosphatase activity // inferred from electronic annotation","chr2:28974505-29011633 (+) // 94.25 // p23.2"]
["11752094_a_at",-0.011786461,0.011786461,0.012187004,-0.023150444,0.024569511,-0.015982628,0.85860145,0.6244502,1.0061998,0.00891686,1.0061998,"up","EIF4G2",1982.0,"0006412 // translation // inferred from direct assay /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred from direct assay /// 0006413 // translational initiation // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006446 // regulation of translational initiation // inferred from direct assay /// 0007050 // cell cycle arrest // traceable author statement /// 0008219 // cell death // traceable author statement /// 0016070 // RNA metabolic process // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016281 // eukaryotic translation initiation factor 4F complex // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003743 // translation initiation factor activity // inferred from direct assay /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008135 // translation factor activity, nucleic acid binding // inferred from direct assay /// 0008135 // translation factor activity, nucleic acid binding // traceable author statement","chr11:10819286-10830043 (-) // 99.97 // p15.3"]
["11741426_a_at",0.26769376,0.010548353,0.061517477,-0.04483795,-0.08671808,-0.010548592,0.49264395,0.120511994,1.1177685,0.16062145,1.1177685,"up","ISLR2",57611.0,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0045773 // positive regulation of axon extension // inferred from sequence or structural similarity /// 0045773 // positive regulation of axon extension // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from sequence or structural similarity /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr15:74422640-74429141 (+) // 88.61 // q24.1"]
["11762257_at",0.31314135,-0.06952286,0.06952286,-0.176085,0.078297615,-0.13523626,0.63449377,0.25418288,1.1344987,0.18205497,1.1344987,"up","","","","","","chr22:17394561-17403088 (-) // 99.9 // q11.1"]
["11726451_a_at",0.13561893,-0.025757551,-0.01903987,-0.13326621,0.01903987,0.1926949,0.9915723,0.9713906,1.0028582,0.0041175745,1.0028582,"up","B3GAT1",27087.0,"0005975 // carbohydrate metabolic process // traceable author statement /// 0006486 // protein glycosylation // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0008499 // UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity // inferred from electronic annotation /// 0015018 // galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:134248397-134281812 (-) // 96.16 // q25"]
["200080_PM_s_at",-0.0750885,-0.03918171,0.005636215,0.012433052,0.036079407,-0.005636215,0.5005078,0.1271155,-1.0356262,-0.050503332,1.0356262,"down","H3F3A /// H3F3AP4 /// H3F3B","3020 /// 3021 /// 440926","0006334 // nucleosome assembly // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement","0000786 // nucleosome // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation","chr1:226250427-226259702 (+) // 86.64 // q42.12"]
["11740232_x_at",0.016053677,0.012716293,0.015862942,-0.0127158165,-0.050454617,-0.13662148,0.44203988,0.09051101,1.0580993,0.08147498,1.0580993,"up","ASL",435.0,"0000050 // urea cycle // inferred from electronic annotation /// 0000050 // urea cycle // traceable author statement /// 0006475 // internal protein amino acid acetylation // inferred from direct assay /// 0006526 // arginine biosynthetic process // inferred from electronic annotation /// 0006527 // arginine catabolic process // traceable author statement /// 0008652 // cellular amino acid biosynthetic process // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042450 // arginine biosynthetic process via ornithine // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement","0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement","0003824 // catalytic activity // inferred from electronic annotation /// 0004056 // argininosuccinate lyase activity // not recorded /// 0004056 // argininosuccinate lyase activity // inferred from electronic annotation /// 0004056 // argininosuccinate lyase activity // traceable author statement /// 0016829 // lyase activity // inferred from electronic annotation","chr7:65540816-65558330 (+) // 84.85 // q11.21"]
["11750862_a_at",-0.0759809,0.011004925,-0.011004925,0.13718843,0.10029817,-0.033639908,0.56953865,0.18365352,-1.0667897,-0.09327586,1.0667897,"down","EMR3",84658.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007218 // neuropeptide signaling pathway // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation","chr19:14729928-14785656 (-) // 99.8 // p13.12"]
["11716717_a_at",-0.050955772,0.018764019,-0.042886257,0.060335636,-0.018764019,0.120529175,0.54403585,0.16046277,-1.0563293,-0.07905958,1.0563293,"down","NINJ1",4814.0,"0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007399 // nervous system development // traceable author statement /// 0042246 // tissue regeneration // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr9:95883775-95896544 (-) // 86.94 // q22.31"]
["11737985_s_at",0.049013376,-0.20285606,-0.049013615,-0.084625006,0.31389332,0.084943056,0.65129936,0.27610505,-1.1268972,-0.17235593,1.1268972,"down","ODZ1",10178.0,"0006955 // immune response // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0008285 // negative regulation of cell proliferation // traceable author statement","0005576 // extracellular region // traceable author statement /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008201 // heparin binding // traceable author statement","chrX:123511822-124159443 (-) // 99.93 // q25"]
["11737702_at",-0.031849384,0.104261875,0.088906765,-0.09685874,0.031849384,-0.033207178,0.589444,0.2027821,1.0617999,0.08651189,1.0617999,"up","CCDC108",255101.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005198 // structural molecule activity // inferred from electronic annotation","chr2:219899556-219903302 (-) // 24.12 // q35"]
["11726546_a_at",-0.017858028,-0.07981801,0.029729605,0.017858028,0.01960969,-0.26470137,0.857607,0.62241757,1.0374888,0.053095788,1.0374888,"up","PITPNM3",83394.0,"0006810 // transport // inferred from electronic annotation /// 0046488 // phosphatidylinositol metabolic process // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0005509 // calcium ion binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008289 // lipid binding // inferred from electronic annotation /// 0008526 // phosphatidylinositol transporter activity // traceable author statement /// 0030971 // receptor tyrosine kinase binding // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:6354583-6459877 (-) // 93.15 // p13.2"]
["11740603_a_at",-0.0041041374,0.0041041374,-0.14116621,-0.04727745,0.027475357,0.14584494,0.6644351,0.29143277,-1.0636841,-0.08906976,1.0636841,"down","APH1B",83464.0,"0006915 // apoptotic process // traceable author statement /// 0007219 // Notch signaling pathway // traceable author statement /// 0007219 // Notch signaling pathway // inferred from electronic annotation /// 0007220 // Notch receptor processing // traceable author statement /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0016485 // protein processing // inferred from direct assay /// 0016485 // protein processing // inferred from electronic annotation /// 0031293 // membrane protein intracellular domain proteolysis // traceable author statement /// 0043085 // positive regulation of catalytic activity // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030133 // transport vesicle // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from direct assay","chr15:63569748-63601324 (+) // 92.43 // q22.2"]
["11764126_at",-0.07680035,-0.07078719,0.07078695,-0.10067439,0.12882137,0.07440758,0.8076799,0.51770467,-1.0423105,-0.05978508,1.0423105,"down","","","","","","chr19:29585077-29585531 (+) // 98.91 // q12"]
["11719451_at",0.0118637085,0.019109726,-0.05306244,-0.0118637085,-0.09196663,0.024651527,0.87892985,0.66951084,1.0132779,0.019029884,1.0132779,"up","RAB14",51552.0,"0006184 // GTP catabolic process // inferred from direct assay /// 0006184 // GTP catabolic process // non-traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006895 // Golgi to endosome transport // inferred from sequence or structural similarity /// 0006895 // Golgi to endosome transport // traceable author statement /// 0006895 // Golgi to endosome transport // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // non-traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007269 // neurotransmitter secretion // non-traceable author statement /// 0007589 // body fluid secretion // inferred from electronic annotation /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from sequence or structural similarity /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from electronic annotation /// 0009790 // embryo development // inferred from sequence or structural similarity /// 0009790 // embryo development // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // non-traceable author statement /// 0032880 // regulation of protein localization // inferred from electronic annotation /// 0045176 // apical protein localization // inferred from electronic annotation /// 0046907 // intracellular transport // non-traceable author statement","0000139 // Golgi membrane // inferred from electronic annotation /// 0005622 // intracellular // inferred from direct assay /// 0005622 // intracellular // non-traceable author statement /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005764 // lysosome // inferred from sequence or structural similarity /// 0005764 // lysosome // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from sequence or structural similarity /// 0005769 // early endosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from sequence or structural similarity /// 0005770 // late endosome // inferred from electronic annotation /// 0005791 // rough endoplasmic reticulum // inferred from sequence or structural similarity /// 0005791 // rough endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005795 // Golgi stack // inferred from sequence or structural similarity /// 0005795 // Golgi stack // inferred from electronic annotation /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0030133 // transport vesicle // inferred from electronic annotation /// 0030140 // trans-Golgi network transport vesicle // inferred from sequence or structural similarity /// 0030140 // trans-Golgi network transport vesicle // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from electronic annotation /// 0042175 // nuclear outer membrane-endoplasmic reticulum membrane network // inferred from sequence or structural similarity /// 0042175 // nuclear outer membrane-endoplasmic reticulum membrane network // inferred from electronic annotation /// 0042599 // lamellar body // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0001948 // glycoprotein binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from direct assay /// 0003924 // GTPase activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from direct assay /// 0005525 // GTP binding // inferred from electronic annotation /// 0019003 // GDP binding // inferred from direct assay","chr9:123940414-123964371 (-) // 93.0 // q33.2"]
["11729990_x_at",-0.0428133,-0.075027466,-0.014801502,0.037940025,0.026098251,0.014801502,0.2545598,0.019398026,-1.0500762,-0.070494086,1.0500762,"down","CACNA1A",773.0,"0000096 // sulfur amino acid metabolic process // inferred from electronic annotation /// 0006006 // glucose metabolic process // inferred from electronic annotation /// 0006112 // energy reserve metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from direct assay /// 0007204 // elevation of cytosolic calcium ion concentration // inferred from sequence or structural similarity /// 0007204 // elevation of cytosolic calcium ion concentration // inferred from electronic annotation /// 0007204 // elevation of cytosolic calcium ion concentration // inferred from direct assay /// 0007214 // gamma-aminobutyric acid signaling pathway // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007268 // synaptic transmission // inferred from electronic annotation /// 0007270 // neuron-neuron synaptic transmission // inferred from electronic annotation /// 0007274 // neuromuscular synaptic transmission // inferred from electronic annotation /// 0007416 // synapse assembly // inferred from electronic annotation /// 0007628 // adult walking behavior // inferred from electronic annotation /// 0008219 // cell death // inferred from direct assay /// 0008219 // cell death // inferred from electronic annotation /// 0008219 // cell death // non-traceable author statement /// 0014051 // gamma-aminobutyric acid secretion // inferred from electronic annotation /// 0014056 // regulation of acetylcholine secretion // inferred from electronic annotation /// 0016049 // cell growth // inferred from electronic annotation /// 0017156 // calcium ion-dependent exocytosis // inferred from electronic annotation /// 0017158 // regulation of calcium ion-dependent exocytosis // inferred from electronic annotation /// 0019226 // transmission of nerve impulse // inferred from electronic annotation /// 0021522 // spinal cord motor neuron differentiation // inferred from electronic annotation /// 0021590 // cerebellum maturation // inferred from electronic annotation /// 0021679 // cerebellar molecular layer development // inferred from electronic annotation /// 0021680 // cerebellar Purkinje cell layer development // inferred from electronic annotation /// 0021702 // cerebellar Purkinje cell differentiation // inferred from electronic annotation /// 0021750 // vestibular nucleus development // inferred from electronic annotation /// 0021953 // central nervous system neuron differentiation // inferred from electronic annotation /// 0030644 // cellular chloride ion homeostasis // inferred from electronic annotation /// 0032353 // negative regulation of hormone biosynthetic process // inferred from electronic annotation /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0035249 // synaptic transmission, glutamatergic // inferred from electronic annotation /// 0042133 // neurotransmitter metabolic process // inferred from electronic annotation /// 0042391 // regulation of membrane potential // inferred from electronic annotation /// 0042445 // hormone metabolic process // inferred from electronic annotation /// 0043113 // receptor clustering // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0048265 // response to pain // inferred from electronic annotation /// 0048266 // behavioral response to pain // inferred from electronic annotation /// 0048791 // calcium ion-dependent exocytosis of neurotransmitter // inferred from electronic annotation /// 0048813 // dendrite morphogenesis // inferred from electronic annotation /// 0050770 // regulation of axonogenesis // inferred from electronic annotation /// 0050796 // regulation of insulin secretion // traceable author statement /// 0050877 // neurological system process // inferred from electronic annotation /// 0050883 // musculoskeletal movement, spinal reflex action // inferred from electronic annotation /// 0050885 // neuromuscular process controlling balance // inferred from electronic annotation /// 0050905 // neuromuscular process // inferred from electronic annotation /// 0051899 // membrane depolarization // traceable author statement /// 0051899 // membrane depolarization // inferred from electronic annotation /// 0051925 // regulation of calcium ion transport via voltage-gated calcium channel activity // inferred from direct assay /// 0051925 // regulation of calcium ion transport via voltage-gated calcium channel activity // inferred from sequence or structural similarity /// 0051925 // regulation of calcium ion transport via voltage-gated calcium channel activity // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0060024 // rhythmic synaptic transmission // inferred from electronic annotation /// 0070588 // calcium ion transmembrane transport // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005891 // voltage-gated calcium channel complex // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0030425 // dendrite // inferred from electronic annotation /// 0042995 // cell projection // inferred from direct assay /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043204 // perikaryon // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005245 // voltage-gated calcium channel activity // inferred from direct assay /// 0005245 // voltage-gated calcium channel activity // inferred from sequence or structural similarity /// 0005245 // voltage-gated calcium channel activity // inferred from electronic annotation /// 0005262 // calcium channel activity // inferred from electronic annotation /// 0005509 // calcium ion binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0008331 // high voltage-gated calcium channel activity // inferred from electronic annotation /// 0019905 // syntaxin binding // inferred from direct assay","chr19:13317255-13617317 (-) // 94.45 // p13.2"]
["11740750_a_at",0.017802477,-0.048142195,-0.017802238,0.121958256,-0.06895614,0.31061435,0.65881115,0.2847198,-1.0998088,-0.13725275,1.0998088,"down","PTPLAD2",401494.0,"0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0008610 // lipid biosynthetic process // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0016829 // lyase activity // inferred from electronic annotation","chr9:21006364-21031640 (-) // 90.86 // p21.3"]
["11715702_at",-0.024561405,-0.028588772,-0.023546219,0.054821014,0.15690899,0.023546219,0.38830036,0.061285343,-1.0747423,-0.10399079,1.0747423,"down","ITGA5",3678.0,"0001525 // angiogenesis // traceable author statement /// 0007044 // cell-substrate junction assembly // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007157 // heterophilic cell-cell adhesion // inferred from electronic annotation /// 0007159 // leukocyte cell-cell adhesion // inferred from electronic annotation /// 0007229 // integrin-mediated signaling pathway // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0007613 // memory // inferred from electronic annotation /// 0030949 // positive regulation of vascular endothelial growth factor receptor signaling pathway // traceable author statement /// 0033631 // cell-cell adhesion mediated by integrin // inferred from electronic annotation /// 0035313 // wound healing, spreading of epidermal cells // inferred from expression pattern /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from mutant phenotype /// 0050900 // leukocyte migration // traceable author statement","0001726 // ruffle // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005911 // cell-cell junction // inferred from direct assay /// 0005925 // focal adhesion // inferred from direct assay /// 0008305 // integrin complex // inferred from electronic annotation /// 0008305 // integrin complex // traceable author statement /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from direct assay /// 0071062 // alphav-beta3 integrin-vitronectin complex // traceable author statement","0004872 // receptor activity // inferred from electronic annotation /// 0005161 // platelet-derived growth factor receptor binding // traceable author statement /// 0005178 // integrin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0043184 // vascular endothelial growth factor receptor 2 binding // traceable author statement","chr12:54789045-54813263 (-) // 96.62 // q13.13"]
["11728527_a_at",0.030348301,-0.019681454,-0.13918471,0.019681454,-0.05446887,0.02834177,0.80505335,0.51295567,-1.0286062,-0.04069072,1.0286062,"down","PEX5L",51555.0,"0016558 // protein import into peroxisome matrix // not recorded /// 0042391 // regulation of membrane potential // inferred from electronic annotation /// 0043949 // regulation of cAMP-mediated signaling // inferred from sequence or structural similarity /// 0045055 // regulated secretory pathway // inferred from electronic annotation /// 0045185 // maintenance of protein location // inferred from electronic annotation /// 0051461 // positive regulation of corticotropin secretion // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005778 // peroxisomal membrane // not recorded /// 0005829 // cytosol // not recorded /// 0016020 // membrane // inferred from electronic annotation /// 0017071 // intracellular cyclic nucleotide activated cation channel complex // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0051286 // cell tip // inferred from electronic annotation","0000268 // peroxisome targeting sequence binding // inferred from direct assay /// 0005052 // peroxisome matrix targeting signal-1 binding // not recorded /// 0005221 // intracellular cyclic nucleotide activated cation channel activity // inferred from electronic annotation /// 0017137 // Rab GTPase binding // inferred from electronic annotation /// 0031267 // small GTPase binding // inferred from physical interaction","chr3:179517849-179754841 (-) // 97.57 // q26.33"]
["11746185_a_at",0.026845455,0.048130035,-0.0021152496,-0.029386044,0.0021157265,-0.045560837,0.41464084,0.07400509,1.0342349,0.048563868,1.0342349,"up","KIF5B",3799.0,"0007018 // microtubule-based movement // traceable author statement /// 0007018 // microtubule-based movement // inferred from electronic annotation /// 0007028 // cytoplasm organization // inferred from electronic annotation /// 0035617 // stress granule disassembly // inferred from sequence or structural similarity /// 0035617 // stress granule disassembly // inferred from electronic annotation /// 0047496 // vesicle transport along microtubule // inferred from sequence or structural similarity /// 0047496 // vesicle transport along microtubule // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005871 // kinesin complex // traceable author statement /// 0005874 // microtubule // inferred from electronic annotation /// 0031982 // vesicle // inferred from direct assay /// 0035253 // ciliary rootlet // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043227 // membrane-bounded organelle // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003777 // microtubule motor activity // inferred from sequence or structural similarity /// 0003777 // microtubule motor activity // inferred from electronic annotation /// 0003777 // microtubule motor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008017 // microtubule binding // inferred from sequence or structural similarity /// 0008017 // microtubule binding // inferred from electronic annotation","chr10:32299943-32345317 (-) // 89.36 // p11.22"]
["11724234_at",0.03793907,0.00624609,-0.07701206,0.054793358,-0.013361931,-0.006246567,0.8504766,0.60577863,-1.0158381,-0.022670556,1.0158381,"down","HGSNAT",138050.0,"0007041 // lysosomal transport // inferred from direct assay /// 0051259 // protein oligomerization // inferred from direct assay","0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0015019 // heparan-alpha-glucosaminide N-acetyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from direct assay /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation","chr8:42995591-43057970 (+) // 84.38 // p11.21"]
["11722419_s_at",-0.033864975,-0.067536354,-0.008900642,0.036868095,0.008900642,0.031248093,0.30004227,0.030395014,-1.0442301,-0.062439654,1.0442301,"down","UTP3",57050.0,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0007420 // brain development // inferred from sequence or structural similarity /// 0007420 // brain development // inferred from electronic annotation /// 0016458 // gene silencing // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay","","chr4:71554195-71556332 (+) // 91.16 // q13.3"]
["11756021_x_at",-0.02009964,-0.047323227,0.10597038,-0.0024576187,0.03833103,0.0024576187,0.9996662,0.9988941,1.0000501,7.2230905E-5,1.0000501,"up","SNRPB2",6629.0,"0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred from electronic annotation /// 0006397 // mRNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from direct assay /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005686 // U2 snRNP // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0017069 // snRNA binding // inferred from electronic annotation","chr20:16712347-16721647 (+) // 95.7 // p12.1"]
["11737650_at",-0.053599834,0.076031685,-0.08293533,0.05956459,0.053599358,-0.10885334,0.9274283,0.7839446,-1.015088,-0.021604748,1.015088,"down","ANKFY1",51479.0,"","0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from sequence or structural similarity /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0046872 // metal ion binding // inferred from electronic annotation","chr17:4097774-4167274 (-) // 93.25 // p13.2"]
["11724644_at",0.4510684,0.052011013,0.46045446,-0.06365633,-0.052011013,-0.08020115,0.35027194,0.04566541,1.3071887,0.38646746,1.3071887,"up","SPOPL",339745.0,"0016567 // protein ubiquitination // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","","chr2:139259349-139331117 (+) // 96.93 // q22.1"]
["11723151_s_at",-0.13641071,-0.0017282963,-0.022913218,0.0017282963,0.1317606,0.23579717,0.442014,0.090467356,-1.1303577,-0.17677943,1.1303577,"down","C7orf10",79783.0,"0008152 // metabolic process // inferred from electronic annotation","","0003824 // catalytic activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr7:40174480-40900357 (+) // 87.42 // p14.1"]
["11740596_a_at",0.06304598,-0.0020456314,-0.00592041,0.11318636,-0.027185917,0.0020456314,0.9443117,0.83104014,-1.0076458,-0.010988668,1.0076458,"down","TGFB2",7042.0,"0000902 // cell morphogenesis // inferred from direct assay /// 0001525 // angiogenesis // traceable author statement /// 0001654 // eye development // inferred from direct assay /// 0001666 // response to hypoxia // inferred from mutant phenotype /// 0001837 // epithelial to mesenchymal transition // inferred from direct assay /// 0001837 // epithelial to mesenchymal transition // traceable author statement /// 0001942 // hair follicle development // inferred from direct assay /// 0001942 // hair follicle development // inferred from sequence or structural similarity /// 0002576 // platelet degranulation // traceable author statement /// 0003007 // heart morphogenesis // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from direct assay /// 0007050 // cell cycle arrest // inferred from direct assay /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from direct assay /// 0007184 // SMAD protein import into nucleus // inferred from direct assay /// 0007267 // cell-cell signaling // traceable author statement /// 0007435 // salivary gland morphogenesis // inferred from expression pattern /// 0007507 // heart development // inferred from direct assay /// 0007596 // blood coagulation // traceable author statement /// 0008219 // cell death // inferred from direct assay /// 0008283 // cell proliferation // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0008347 // glial cell migration // inferred from direct assay /// 0009611 // response to wounding // inferred from expression pattern /// 0009790 // embryo development // traceable author statement /// 0010002 // cardioblast differentiation // inferred from direct assay /// 0010634 // positive regulation of epithelial cell migration // inferred from direct assay /// 0010693 // negative regulation of alkaline phosphatase activity // inferred from direct assay /// 0010718 // positive regulation of epithelial to mesenchymal transition // inferred from direct assay /// 0010936 // negative regulation of macrophage cytokine production // inferred from direct assay /// 0014068 // positive regulation of phosphatidylinositol 3-kinase cascade // inferred from direct assay /// 0016049 // cell growth // inferred from electronic annotation /// 0016477 // cell migration // inferred from direct assay /// 0022601 // menstrual cycle phase // inferred from expression pattern /// 0023014 // signal transduction by phosphorylation // inferred from direct assay /// 0030097 // hemopoiesis // inferred from sequence or structural similarity /// 0030168 // platelet activation // traceable author statement /// 0030199 // collagen fibril organization // inferred from direct assay /// 0030307 // positive regulation of cell growth // inferred from direct assay /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0030593 // neutrophil chemotaxis // inferred from sequence or structural similarity /// 0030593 // neutrophil chemotaxis // traceable author statement /// 0031069 // hair follicle morphogenesis // inferred from sequence or structural similarity /// 0032147 // activation of protein kinase activity // inferred from direct assay /// 0032570 // response to progesterone stimulus // inferred from direct assay /// 0032874 // positive regulation of stress-activated MAPK cascade // inferred from direct assay /// 0032909 // regulation of transforming growth factor beta2 production // inferred from mutant phenotype /// 0033630 // positive regulation of cell adhesion mediated by integrin // inferred from direct assay /// 0040007 // growth // inferred from electronic annotation /// 0042060 // wound healing // inferred from sequence or structural similarity /// 0042416 // dopamine biosynthetic process // inferred from sequence or structural similarity /// 0042476 // odontogenesis // non-traceable author statement /// 0042637 // catagen // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0043525 // positive regulation of neuron apoptotic process // inferred from direct assay /// 0045216 // cell-cell junction organization // inferred from direct assay /// 0045726 // positive regulation of integrin biosynthetic process // inferred from direct assay /// 0045778 // positive regulation of ossification // inferred from expression pattern /// 0045787 // positive regulation of cell cycle // inferred from sequence or structural similarity /// 0045823 // positive regulation of heart contraction // inferred from direct assay /// 0048103 // somatic stem cell division // inferred from sequence or structural similarity /// 0048566 // embryonic digestive tract development // inferred from expression pattern /// 0048666 // neuron development // inferred from sequence or structural similarity /// 0048699 // generation of neurons // traceable author statement /// 0050680 // negative regulation of epithelial cell proliferation // inferred from direct assay /// 0050680 // negative regulation of epithelial cell proliferation // inferred from mutant phenotype /// 0050714 // positive regulation of protein secretion // inferred from direct assay /// 0050777 // negative regulation of immune response // traceable author statement /// 0050778 // positive regulation of immune response // inferred from sequence or structural similarity /// 0051781 // positive regulation of cell division // inferred from electronic annotation /// 0051795 // positive regulation of catagen // inferred from direct assay /// 0051891 // positive regulation of cardioblast differentiation // inferred from direct assay /// 0060038 // cardiac muscle cell proliferation // inferred from direct assay /// 0060317 // cardiac epithelial to mesenchymal transition // inferred from direct assay /// 0060389 // pathway-restricted SMAD protein phosphorylation // inferred from direct assay","0005576 // extracellular region // inferred from direct assay /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0030424 // axon // inferred from sequence or structural similarity /// 0031012 // extracellular matrix // inferred from direct assay /// 0031093 // platelet alpha granule lumen // traceable author statement /// 0043025 // neuronal cell body // inferred from sequence or structural similarity","0001540 // beta-amyloid binding // inferred from direct assay /// 0004702 // receptor signaling protein serine/threonine kinase activity // inferred from direct assay /// 0005102 // receptor binding // inferred from mutant phenotype /// 0005114 // type II transforming growth factor beta receptor binding // inferred from direct assay /// 0005114 // type II transforming growth factor beta receptor binding // inferred from physical interaction /// 0005125 // cytokine activity // traceable author statement /// 0005160 // transforming growth factor beta receptor binding // inferred from direct assay /// 0005160 // transforming growth factor beta receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046982 // protein heterodimerization activity // traceable author statement","chr1:218519390-218617959 (+) // 97.05 // q41"]
["11738187_a_at",0.099864006,0.08090019,-0.08090019,-0.087201595,0.26244164,-0.14375114,0.9599796,0.8780323,1.0159235,0.02279177,1.0159235,"up","PHF12",57649.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0016580 // Sin3 complex // inferred from direct assay /// 0017053 // transcriptional repressor complex // inferred from direct assay","0001106 // RNA polymerase II transcription corepressor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0035091 // phosphatidylinositol binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:27239161-27278508 (-) // 94.66 // q11.2"]
["11727449_a_at",-0.11701274,-0.005699396,0.005699396,0.019854069,-0.10085797,0.06666231,0.85542005,0.61810136,-1.0240057,-0.034223676,1.0240057,"down","TMOD4 /// VPS72","29765 /// 6944","0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006936 // muscle contraction // traceable author statement /// 0016568 // chromatin modification // inferred from electronic annotation /// 0035019 // somatic stem cell maintenance // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005523 // tropomyosin binding // inferred from electronic annotation /// 0005523 // tropomyosin binding // traceable author statement","chr1:151142462-151148547 (-) // 97.21 // q21.3"]
["11750142_x_at",0.010497093,-0.010497093,-0.043128014,-0.034088135,0.015096664,0.010983467,0.85917634,0.62543654,-1.0081475,-0.011706701,1.0081475,"down","YY1AP1",55249.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr1:155629247-155646462 (-) // 91.83 // q22"]
["11754804_x_at",-0.03494072,-0.02559185,-0.05805874,0.06179428,0.02559185,0.045965195,0.1449083,0.0041397302,-1.0599388,-0.08398095,1.0599388,"down","CDC16",8881.0,"0000075 // cell cycle checkpoint // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0007067 // mitosis // traceable author statement /// 0007088 // regulation of mitosis // traceable author statement /// 0007094 // mitotic cell cycle spindle assembly checkpoint // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0051301 // cell division // inferred from electronic annotation /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0070979 // protein K11-linked ubiquitination // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005680 // anaphase-promoting complex // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005813 // centrosome // traceable author statement /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // traceable author statement /// 0005819 // spindle // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005876 // spindle microtubule // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr13:115024643-115038141 (+) // 84.31 // q34"]
["11730258_a_at",0.03896761,-0.046168804,6.661415E-4,0.13571405,-6.661415E-4,-0.0046687126,0.7598139,0.43210602,-1.0321395,-0.04563803,1.0321395,"down","EPN3",55040.0,"","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0030136 // clathrin-coated vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0008289 // lipid binding // inferred from electronic annotation","chr17:48609903-48621109 (+) // 82.33 // q21.33"]
["11736350_at",-0.016942978,0.14297247,0.016942978,-0.00414896,0.00414896,-0.13981342,0.6190293,0.23458374,1.0675192,0.094262004,1.0675192,"up","ZNF366",167465.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0033147 // negative regulation of intracellular estrogen receptor signaling pathway // inferred from direct assay /// 0043627 // response to estrogen stimulus // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0000988 // protein binding transcription factor activity // inferred from direct assay /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0030331 // estrogen receptor binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr5:71738500-71803554 (-) // 89.03 // q13.2"]
["11746528_a_at",0.26999807,0.08220363,0.12502337,-0.10155249,-0.08220339,-0.3244872,0.28703088,0.02699165,1.2556978,0.32848936,1.2556978,"up","ATP2B4",493.0,"0003407 // neural retina development // inferred from electronic annotation /// 0006754 // ATP biosynthetic process // inferred from electronic annotation /// 0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0034220 // ion transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0070588 // calcium ion transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0005388 // calcium-transporting ATPase activity // inferred from electronic annotation /// 0005388 // calcium-transporting ATPase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0015662 // ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016820 // hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances // inferred from electronic annotation /// 0030165 // PDZ domain binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:203652079-203703432 (+) // 93.18 // q32.1"]
["11720417_a_at",-0.09354401,-0.016141176,0.08314395,0.016141176,0.22261739,-0.017779589,0.74904555,0.4152649,-1.0588562,-0.08250674,1.0588562,"down","CAMSAP1",157922.0,"0007010 // cytoskeleton organization // inferred from mutant phenotype /// 0022604 // regulation of cell morphogenesis // inferred from mutant phenotype","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation","0008017 // microtubule binding // inferred from electronic annotation","chr9:138700332-138799005 (-) // 99.31 // q34.3"]
["11753508_a_at",-0.03704524,0.10472131,-0.021915674,0.1812458,-0.041867495,0.021915913,0.87282056,0.65592885,-1.0270535,-0.0385113,1.0270535,"down","ZC3H12D",340152.0,"0030308 // negative regulation of cell growth // inferred from direct assay /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation /// 2000134 // negative regulation of G1/S transition of mitotic cell cycle // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004519 // endonuclease activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:149777776-149795732 (-) // 100.0 // q25.1"]
["11735853_x_at",-0.12261009,0.12145066,-0.1453681,0.0052309036,0.072446585,-0.0052309036,0.7747884,0.45726138,-1.0518955,-0.072991386,1.0518955,"down","OR10H1",26539.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr19:15917812-15918936 (-) // 98.49 // p13.12"]
["11751317_x_at",0.01572895,0.035017967,0.11982441,-0.016849518,-0.026986122,-0.01572895,0.41731805,0.07562447,1.0546118,0.07671205,1.0546118,"up","EI24",9538.0,"0006914 // autophagy // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0006917 // induction of apoptosis // traceable author statement /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0042493 // response to drug // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation","","chr11:125439353-125453922 (+) // 99.72 // q24.2"]
["11730314_a_at",0.0034737587,-0.2253027,0.37428617,-0.0034737587,0.071702,-0.015810013,0.95404625,0.8596006,1.0233831,0.03334637,1.0233831,"up","ERMAP",114625.0,"","0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","","chr1:43282758-43310655 (+) // 82.7 // p34.2"]
["11757793_s_at",-0.006043911,0.006043434,0.07990646,-0.023247242,-0.016296387,0.042381287,0.7936279,0.4917617,1.017966,0.025689421,1.017966,"up","TFPI",7035.0,"0007596 // blood coagulation // traceable author statement /// 0007596 // blood coagulation // inferred from electronic annotation /// 0007598 // blood coagulation, extrinsic pathway // traceable author statement /// 0007599 // hemostasis // inferred from electronic annotation /// 0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // traceable author statement","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement","0004866 // endopeptidase inhibitor activity // traceable author statement /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation","chr2:188328956-188329409 (-) // 90.56 // q32.1"]
["11737861_a_at",0.031355858,0.11108589,0.0736742,-0.13112164,-0.031355858,-0.053081036,0.2545598,0.019411234,1.1048814,0.14389153,1.1048814,"up","ZSCAN5A",79149.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016032 // viral reproduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:56732680-56739701 (-) // 99.09 // q13.43"]
["11733596_x_at",-0.007973671,-0.16683626,0.007973433,0.021009684,-0.021654844,0.020856142,0.6998699,0.33979398,-1.0441647,-0.062349234,1.0441647,"down","C12orf59",120939.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr12:10331556-10344401 (+) // 81.82 // p13.2"]
["11731226_a_at",0.0,-0.03908372,0.0,-0.058023214,0.029594421,0.0,0.9708409,0.9079375,-1.0024649,-0.0035517097,1.0024649,"down","TDRD6",221400.0,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0007281 // germ cell development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from sequence or structural similarity /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation","0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0033391 // chromatoid body // inferred from sequence or structural similarity /// 0043186 // P granule // inferred from electronic annotation","","chr6:46655611-46672054 (+) // 95.56 // p12.3"]
["11756427_x_at",-0.003148079,0.05264759,0.214993,-0.0125517845,-0.019010067,0.0031485558,0.59833944,0.21177788,1.0700182,0.0976353,1.0700182,"up","ARL16",339231.0,"0007264 // small GTPase mediated signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation","chr17:79648209-79650802 (-) // 62.85 // q25.3"]
["11742921_s_at",0.0049877167,-0.0049877167,0.08510208,-0.03371334,0.03914833,-0.08619881,0.66885126,0.29743573,1.0390669,0.05528856,1.0390669,"up","HSPA9",3313.0,"0006457 // protein folding // inferred from electronic annotation /// 0006611 // protein export from nucleus // inferred from electronic annotation /// 0006626 // protein targeting to mitochondrion // traceable author statement /// 0006916 // anti-apoptosis // traceable author statement /// 0006950 // response to stress // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0042645 // mitochondrial nucleoid // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // traceable author statement /// 0051082 // unfolded protein binding // inferred from electronic annotation","chr5:137890234-137911730 (-) // 94.55 // q31.2"]
["11752971_a_at",-0.24079561,-0.03407669,-0.350873,0.046733856,0.03407669,0.04694891,0.3699288,0.05398212,-1.1901705,-0.25116828,1.1901705,"down","TMEM159",57146.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr16:21170009-21191541 (+) // 99.93 // p12.3"]
["11762069_a_at",-0.2016592,-0.011892319,-0.13913822,0.088362694,0.09214449,0.011891842,0.3389468,0.042086773,-1.1342167,-0.18169625,1.1342167,"down","SEPT6",23157.0,"0000910 // cytokinesis // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0030496 // midbody // inferred from electronic annotation /// 0031105 // septin complex // inferred from electronic annotation /// 0032154 // cleavage furrow // inferred from electronic annotation /// 0043679 // axon terminus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // traceable author statement /// 0005525 // GTP binding // inferred from electronic annotation","chrX:118762982-118827120 (-) // 98.31 // q24"]
["11749070_x_at",-0.16519403,-0.06927538,-0.13777828,0.07704878,0.069275856,0.08123922,0.11650381,0.0022430434,-1.1486484,-0.19993724,1.1486484,"down","PAQR4",124222.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation","chr16:3020451-3021983 (+) // 85.68 // p13.3"]
["11760386_at",-0.123081684,0.12308192,-0.13866496,0.100127935,-0.100128174,0.104376316,0.79582936,0.4961799,-1.057761,-0.08101363,1.057761,"down","IL16",3603.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006935 // chemotaxis // inferred from electronic annotation /// 0006955 // immune response // traceable author statement /// 0030595 // leukocyte chemotaxis // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0050930 // induction of positive chemotaxis // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay","0005125 // cytokine activity // inferred from electronic annotation","chr15:81571896-81600901 (+) // 77.31 // q25.1"]
["11746682_a_at",-0.024827957,-0.071938515,-0.044898033,0.043101788,0.02482748,0.11473894,0.27731347,0.024275806,-1.077816,-0.10811092,1.077816,"down","AACS",65985.0,"0001889 // liver development // inferred from electronic annotation /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0007584 // response to nutrient // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0010243 // response to organic nitrogen // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0014074 // response to purine-containing compound // inferred from electronic annotation /// 0032024 // positive regulation of insulin secretion // inferred from electronic annotation /// 0034201 // response to oleic acid // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042594 // response to starvation // inferred from electronic annotation /// 0045471 // response to ethanol // inferred from electronic annotation /// 0050872 // white fat cell differentiation // inferred from electronic annotation /// 0060612 // adipose tissue development // inferred from electronic annotation /// 0071333 // cellular response to glucose stimulus // inferred from electronic annotation /// 0071394 // cellular response to testosterone stimulus // inferred from electronic annotation /// 0071397 // cellular response to cholesterol // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0030729 // acetoacetate-CoA ligase activity // inferred from electronic annotation /// 0047760 // butyrate-CoA ligase activity // inferred from electronic annotation","chr12:125549979-125626866 (+) // 87.16 // q24.31"]
["11751744_a_at",0.044684887,0.10756302,-0.052266598,0.09238911,-0.0508852,-0.044684887,0.8606725,0.6295394,1.0241219,0.03438742,1.0241219,"up","MMD",23531.0,"0019835 // cytolysis // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031902 // late endosome membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004872 // receptor activity // traceable author statement","chr17:53471614-53499261 (-) // 89.98 // q22"]
["11737552_at",-0.08186102,0.17920661,0.030651093,0.051200867,-0.12753129,-0.030651331,0.7646422,0.4405342,1.0557923,0.07832609,1.0557923,"up","B3GALT1",8708.0,"0006486 // protein glycosylation // inferred from direct assay /// 0006486 // protein glycosylation // inferred from electronic annotation /// 0009312 // oligosaccharide biosynthetic process // inferred from electronic annotation /// 0030259 // lipid glycosylation // non-traceable author statement","0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0008378 // galactosyltransferase activity // inferred from electronic annotation /// 0008499 // UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity // inferred from direct assay /// 0008499 // UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation","chr2:168675181-168727366 (+) // 98.34 // q24.3"]
["11725970_x_at",-0.026420593,-0.01804924,0.061613083,0.010269165,0.075611115,-0.010269165,0.8637032,0.6365735,-1.0136006,-0.019489266,1.0136006,"down","HNRNPF",3185.0,"0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0006396 // RNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0043484 // regulation of RNA splicing // inferred from direct assay /// 0043484 // regulation of RNA splicing // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0030530 // heterogeneous nuclear ribonucleoprotein complex // traceable author statement /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0003727 // single-stranded RNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction","chr10:43881064-43892277 (-) // 98.43 // q11.21"]
["11746333_a_at",0.047297,0.0037527084,-0.016153812,-0.0037531853,-0.10070133,0.028343678,0.7633031,0.43877372,1.0259798,0.037002265,1.0259798,"up","DENND4C",55667.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr9:19331984-19372357 (+) // 99.92 // p22.1"]
["11731055_x_at",-0.015045643,-0.16684961,-0.005868435,0.04186058,0.053239346,0.005868435,0.53158826,0.14994673,-1.0689868,-0.096244,1.0689868,"down","FNIP1",96459.0,"0001932 // regulation of protein phosphorylation // inferred from direct assay /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr5:130977406-131132799 (-) // 93.89 // q31.1"]
["11733327_at",0.03015232,0.16664839,0.1176815,-0.03015232,-0.03015232,-0.08416891,0.28005752,0.02505186,1.1118678,0.15298524,1.1118678,"up","NKD1",85407.0,"0016055 // Wnt receptor signaling pathway // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr16:50582241-50670816 (+) // 78.0 // q12.1"]
["11749077_x_at",0.09553146,0.04461384,0.036374092,-0.036374092,-0.13137054,-0.080387115,0.21872133,0.012883844,1.1030899,0.1415504,1.1030899,"up","HDGF",3068.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0007165 // signal transduction // non-traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement","0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008083 // growth factor activity // inferred from electronic annotation /// 0008201 // heparin binding // inferred from electronic annotation /// 0008201 // heparin binding // traceable author statement","chr1:156713098-156721293 (-) // 92.53 // q23.1"]
["11732024_a_at",-0.011087418,0.105443954,-0.18142796,0.08146763,2.0933151E-4,-2.0980835E-4,0.8271426,0.55626786,-1.0397089,-0.05617959,1.0397089,"down","MAMDC4",158056.0,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr9:139746818-139755251 (+) // 97.89 // q34.3"]
["11726609_at",-0.099200726,-0.0059285164,0.08200407,0.0059280396,0.071667194,-0.06579399,0.95704097,0.86790365,-1.0081024,-0.011642215,1.0081024,"down","MTF2",22823.0,"","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:93544794-93604631 (+) // 98.38 // p22.1"]
["11726833_a_at",-0.06997442,0.042761326,-0.18135405,-0.042761803,0.13961124,0.109454155,0.56807965,0.18252812,-1.1006,-0.13829024,1.1006,"down","C11orf52 /// HSPB2 /// HSPB2-C11orf52","100528019 /// 3316 /// 91894","0006950 // response to stress // inferred from electronic annotation /// 0006986 // response to unfolded protein // non-traceable author statement /// 0043085 // positive regulation of catalytic activity // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0005515 // protein binding // inferred from physical interaction /// 0008047 // enzyme activator activity // traceable author statement","chr11:111782851-111784817 (+) // 96.08 // q23.1"]
["11730050_a_at",0.0059092045,-0.023098469,-0.005908966,0.3373325,0.017506838,-0.10489893,0.8131984,0.52872974,-1.0651177,-0.09101289,1.0651177,"down","CA13 /// LOC100507258","100507258 /// 377677","0006730 // one-carbon metabolic process // inferred from electronic annotation","","0004089 // carbonate dehydratase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:86157715-86196299 (+) // 82.92 // q21.2"]
["11734875_a_at",-0.097649574,-0.026043892,0.026043415,-0.06184292,0.026043415,0.14383745,0.725622,0.37997648,-1.0486714,-0.068562634,1.0486714,"down","PPFIBP1",8496.0,"0007155 // cell adhesion // traceable author statement /// 0015074 // DNA integration // inferred from electronic annotation","0005886 // plasma membrane // non-traceable author statement","0003677 // DNA binding // inferred from electronic annotation /// 0008907 // integrase activity // inferred from electronic annotation","chr12:27677044-27848497 (+) // 84.11 // p11.23"]
["11756215_x_at",0.0051317215,-0.0017881393,0.03158188,-0.013628006,0.0017881393,-0.008584976,0.5577993,0.17286772,1.0128708,0.018450141,1.0128708,"up","UBA52",7311.0,"0000075 // cell cycle checkpoint // traceable author statement /// 0000080 // G1 phase of mitotic cell cycle // traceable author statement /// 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000084 // S phase of mitotic cell cycle // traceable author statement /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0000187 // activation of MAPK activity // traceable author statement /// 0000209 // protein polyubiquitination // traceable author statement /// 0000216 // M/G1 transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006464 // cellular protein modification process // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006916 // anti-apoptosis // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007219 // Notch signaling pathway // traceable author statement /// 0007220 // Notch receptor processing // traceable author statement /// 0007249 // I-kappaB kinase/NF-kappaB cascade // traceable author statement /// 0007254 // JNK cascade // traceable author statement /// 0008063 // Toll signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016044 // cellular membrane organization // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0016197 // endosomal transport // traceable author statement /// 0019058 // viral infectious cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0032480 // negative regulation of type I interferon production // traceable author statement /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0042059 // negative regulation of epidermal growth factor receptor signaling pathway // traceable author statement /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0046788 // egress of virus within host cell // traceable author statement /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0051092 // positive regulation of NF-kappaB transcription factor activity // traceable author statement /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0070423 // nucleotide-binding oligomerization domain containing signaling pathway // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0010008 // endosome membrane // traceable author statement /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0030666 // endocytic vesicle membrane // traceable author statement","0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr19:18682688-18686051 (+) // 60.92 // p13.11"]
["11749742_a_at",-0.020815372,0.020815372,-0.10628128,0.055016994,0.047853947,-0.0320673,0.6499058,0.27465305,-1.0417639,-0.05902835,1.0417639,"down","KLHL3",26249.0,"0016567 // protein ubiquitination // inferred from electronic annotation /// 0016567 // protein ubiquitination // traceable author statement /// 0070294 // renal sodium ion absorption // inferred from mutant phenotype /// 0072156 // distal tubule morphogenesis // inferred from mutant phenotype","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0031463 // Cul3-RING ubiquitin ligase complex // traceable author statement","0003779 // actin binding // inferred from electronic annotation /// 0005198 // structural molecule activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr5:136957190-137008565 (-) // 87.56 // q31.2"]
["11726138_at",-0.033712864,0.033712864,-0.43166304,-0.09982681,0.14462805,0.09622669,0.67628086,0.30732587,-1.1414732,-0.19089696,1.1414732,"down","MTMR9",66036.0,"0016311 // dephosphorylation // inferred from electronic annotation /// 0050790 // regulation of catalytic activity // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0030234 // enzyme regulator activity // inferred from electronic annotation","chr8:11141999-11185655 (+) // 90.89 // p23.1"]
["11746063_a_at",-0.015648365,0.15018797,-0.06304455,0.015648365,-0.06747103,0.111726284,0.98948276,0.96502644,1.0026817,0.0038637433,1.0026817,"up","IKBKB",3551.0,"0001782 // B cell homeostasis // inferred from electronic annotation /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0003009 // skeletal muscle contraction // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // non-traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006916 // anti-apoptosis // traceable author statement /// 0006954 // inflammatory response // traceable author statement /// 0007249 // I-kappaB kinase/NF-kappaB cascade // traceable author statement /// 0007252 // I-kappaB phosphorylation // traceable author statement /// 0007252 // I-kappaB phosphorylation // inferred from electronic annotation /// 0008063 // Toll signaling pathway // traceable author statement /// 0009615 // response to virus // traceable author statement /// 0009636 // response to toxin // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0032481 // positive regulation of type I interferon production // traceable author statement /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0042493 // response to drug // inferred from electronic annotation /// 0043122 // regulation of I-kappaB kinase/NF-kappaB cascade // inferred from electronic annotation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045893 // positive regulation of transcription, DNA-dependent // non-traceable author statement /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0051092 // positive regulation of NF-kappaB transcription factor activity // traceable author statement /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from electronic annotation /// 0070423 // nucleotide-binding oligomerization domain containing signaling pathway // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0008385 // IkappaB kinase complex // traceable author statement /// 0008385 // IkappaB kinase complex // inferred from electronic annotation /// 0009898 // internal side of plasma membrane // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0035631 // CD40 receptor complex // inferred from sequence or structural similarity /// 0045121 // membrane raft // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008384 // IkappaB kinase activity // traceable author statement /// 0008384 // IkappaB kinase activity // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr8:42128819-42179979 (+) // 100.0 // p11.21"]
["11733452_a_at",-0.0017166138,0.0017166138,-0.03054905,0.046934128,0.0020141602,-0.09039688,0.9801239,0.9347598,1.0025215,0.0036331983,1.0025215,"up","IRX5",10265.0,"0002027 // regulation of heart rate // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007601 // visual perception // inferred from electronic annotation /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0042551 // neuron maturation // inferred from electronic annotation /// 0048468 // cell development // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0060040 // retinal bipolar neuron differentiation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005499 // vitamin D binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr16:54965110-54968397 (+) // 93.75 // q12.2"]
["11761685_at",-0.20284843,0.028547287,-0.19450712,-0.026181221,0.3707466,0.026181221,0.5491866,0.16602902,-1.1863406,-0.24651822,1.1863406,"down","IST1",9798.0,"0007049 // cell cycle // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from direct assay /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr16:71929433-71958103 (+) // 97.86 // q22.2"]
["11755716_x_at",-0.06843209,0.040024996,0.15096831,0.033397913,-0.12476683,-0.033397913,0.70784503,0.35115674,1.0588093,0.082442746,1.0588093,"up","RNF157",114804.0,"","","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:74139859-74163196 (-) // 69.19 // q25.1"]
["11750438_x_at",0.035758972,0.029289246,0.06840706,-0.08838463,-0.059758186,-0.029289246,0.179878,0.007742092,1.0744729,0.1036291,1.0744729,"up","PGAM1",5223.0,"0005975 // carbohydrate metabolic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006094 // gluconeogenesis // traceable author statement /// 0006096 // glycolysis // traceable author statement /// 0006096 // glycolysis // inferred from electronic annotation /// 0006110 // regulation of glycolysis // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation /// 0043456 // regulation of pentose-phosphate shunt // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement /// 0045730 // respiratory burst // inferred from direct assay","0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement","0003824 // catalytic activity // inferred from electronic annotation /// 0004082 // bisphosphoglycerate mutase activity // inferred from electronic annotation /// 0004083 // bisphosphoglycerate 2-phosphatase activity // inferred from electronic annotation /// 0004619 // phosphoglycerate mutase activity // inferred from mutant phenotype /// 0004619 // phosphoglycerate mutase activity // non-traceable author statement /// 0004619 // phosphoglycerate mutase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation /// 0016868 // intramolecular transferase activity, phosphotransferases // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction","chr10:99187430-99193197 (+) // 97.79 // q24.1"]
["11745256_s_at",-0.07176733,-0.005888462,0.005888462,-0.040545464,0.033886433,0.048169136,0.71422744,0.36062014,-1.0265181,-0.037759073,1.0265181,"down","CPEB4",80315.0,"","","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation","chr5:173316342-173387312 (+) // 96.46 // q35.2"]
["11757301_s_at",-0.019622803,-0.009096146,-0.03568077,0.009096146,0.07772827,0.023931503,0.38118386,0.058448963,-1.0412996,-0.05838519,1.0412996,"down","SDCBP",6386.0,"0006612 // protein targeting to membrane // non-traceable author statement /// 0006930 // substrate-dependent cell migration, cell extension // non-traceable author statement /// 0007265 // Ras protein signal transduction // inferred from electronic annotation /// 0007268 // synaptic transmission // non-traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0030036 // actin cytoskeleton organization // non-traceable author statement /// 0035556 // intracellular signal transduction // non-traceable author statement /// 0042327 // positive regulation of phosphorylation // inferred from direct assay /// 0046330 // positive regulation of JNK cascade // inferred by curator","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005856 // cytoskeleton // non-traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005895 // interleukin-5 receptor complex // inferred from sequence or structural similarity /// 0005895 // interleukin-5 receptor complex // inferred from electronic annotation /// 0005912 // adherens junction // non-traceable author statement /// 0005912 // adherens junction // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from electronic annotation /// 0016020 // membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation","0001948 // glycoprotein binding // inferred from electronic annotation /// 0005109 // frizzled binding // inferred from physical interaction /// 0005137 // interleukin-5 receptor binding // inferred from sequence or structural similarity /// 0005137 // interleukin-5 receptor binding // inferred from electronic annotation /// 0008022 // protein C-terminus binding // inferred from electronic annotation /// 0008093 // cytoskeletal adaptor activity // non-traceable author statement /// 0019838 // growth factor binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0045545 // syndecan binding // inferred from physical interaction /// 0045545 // syndecan binding // non-traceable author statement /// 0045545 // syndecan binding // inferred from electronic annotation /// 0046875 // ephrin receptor binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from physical interaction /// 0050839 // cell adhesion molecule binding // inferred from electronic annotation","chr8:59494755-59495419 (+) // 78.67 // q12.1"]
["11725836_x_at",-0.06909227,0.017302513,-0.20269585,0.076714516,-0.01730299,0.18997383,0.50142246,0.12788582,-1.1234664,-0.16795693,1.1234664,"down","NFKBIB",4793.0,"0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006351 // transcription, DNA-dependent // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007253 // cytoplasmic sequestering of NF-kappaB // inferred from electronic annotation /// 0008063 // Toll signaling pathway // traceable author statement /// 0032481 // positive regulation of type I interferon production // traceable author statement /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0051092 // positive regulation of NF-kappaB transcription factor activity // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation","0003713 // transcription coactivator activity // traceable author statement /// 0004871 // signal transducer activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr19:39390577-39399534 (+) // 85.8 // q13.2"]
["11762619_a_at",-0.058960915,-0.017603159,0.04042101,0.11509323,0.006860256,-0.0068597794,0.7094589,0.35418808,-1.0355608,-0.050412323,1.0355608,"down","BMP5",653.0,"0001501 // skeletal system development // non-traceable author statement /// 0001501 // skeletal system development // inferred from electronic annotation /// 0001503 // ossification // inferred from electronic annotation /// 0003323 // type B pancreatic cell development // inferred from direct assay /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007389 // pattern specification process // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0010719 // negative regulation of epithelial to mesenchymal transition // non-traceable author statement /// 0010862 // positive regulation of pathway-restricted SMAD protein phosphorylation // inferred from direct assay /// 0010894 // negative regulation of steroid biosynthetic process // inferred from direct assay /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030539 // male genitalia development // inferred from electronic annotation /// 0032348 // negative regulation of aldosterone biosynthetic process // inferred from direct assay /// 0040007 // growth // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // non-traceable author statement /// 0043569 // negative regulation of insulin-like growth factor receptor signaling pathway // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0050679 // positive regulation of epithelial cell proliferation // inferred from direct assay /// 0051216 // cartilage development // inferred from electronic annotation /// 0071676 // negative regulation of mononuclear cell migration // non-traceable author statement /// 1900006 // positive regulation of dendrite development // inferred from direct assay /// 2000065 // negative regulation of cortisol biosynthetic process // inferred from direct assay /// 2000105 // positive regulation of DNA-dependent DNA replication // inferred from direct assay","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from sequence or structural similarity /// 0005615 // extracellular space // inferred from electronic annotation /// 0031988 // membrane-bounded vesicle // inferred from sequence or structural similarity /// 0031988 // membrane-bounded vesicle // inferred from electronic annotation","0005125 // cytokine activity // non-traceable author statement /// 0005125 // cytokine activity // inferred from electronic annotation /// 0008083 // growth factor activity // inferred from electronic annotation /// 0070700 // BMP receptor binding // inferred from physical interaction","chr6:55619724-55739677 (-) // 99.95 // p12.1"]
["11715261_s_at",0.0239048,0.06368613,0.07300329,-0.0239048,-0.10795927,-0.024693012,0.2946129,0.02895012,1.0760291,0.10571704,1.0760291,"up","LOC440563 /// LOC649330","440563 /// 649330","","0030529 // ribonucleoprotein complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation","chr1:12907235-12908237 (-) // 96.11 // p36.21 /// chr1:13182965-13183967 (-) // 95.71 // p36.21"]
["11749600_a_at",-1.8119812E-5,0.006424904,0.12436485,1.8119812E-5,-0.051698685,-0.051698685,0.53198344,0.15041624,1.0555905,0.078050286,1.0555905,"up","PRG2 /// SLC43A3","29015 /// 5553","0006955 // immune response // inferred from electronic annotation /// 0042742 // defense response to bacterium // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030133 // transport vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0008201 // heparin binding // inferred from electronic annotation /// 0030246 // carbohydrate binding // traceable author statement /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr11:57182626-57193952 (-) // 100.0 // q12.1"]
["11730214_at",-0.04458809,0.034110785,-0.019719124,-0.06585908,0.030210733,0.019719124,0.9705237,0.9071153,-1.0033019,-0.0047557284,1.0033019,"down","DUOX2",50506.0,"0006590 // thyroid hormone generation // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0009566 // fertilization // inferred from electronic annotation /// 0009615 // response to virus // inferred from direct assay /// 0019221 // cytokine-mediated signaling pathway // inferred from direct assay /// 0019221 // cytokine-mediated signaling pathway // inferred from sequence or structural similarity /// 0030282 // bone mineralization // inferred from electronic annotation /// 0030878 // thyroid gland development // inferred from electronic annotation /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0042335 // cuticle development // inferred from sequence or structural similarity /// 0042403 // thyroid hormone metabolic process // inferred from electronic annotation /// 0042445 // hormone metabolic process // inferred from electronic annotation /// 0042446 // hormone biosynthetic process // inferred from electronic annotation /// 0042744 // hydrogen peroxide catabolic process // inferred from electronic annotation /// 0048839 // inner ear development // inferred from electronic annotation /// 0048855 // adenohypophysis morphogenesis // inferred from electronic annotation /// 0051591 // response to cAMP // inferred from direct assay /// 0051591 // response to cAMP // inferred from sequence or structural similarity /// 0055114 // oxidation-reduction process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation","0004601 // peroxidase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from direct assay /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0016174 // NAD(P)H oxidase activity // inferred from direct assay /// 0016174 // NAD(P)H oxidase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0020037 // heme binding // inferred from electronic annotation /// 0050660 // flavin adenine dinucleotide binding // inferred from electronic annotation","chr15:45384851-45406359 (-) // 90.89 // q21.1"]
["11717125_at",-0.019002438,0.01169157,0.0119524,0.05894375,-0.056456566,-0.01169157,0.9682225,0.9018122,1.0032042,0.004615331,1.0032042,"up","SH3PXD2A",9644.0,"0006801 // superoxide metabolic process // inferred from direct assay /// 0006801 // superoxide metabolic process // inferred from mutant phenotype /// 0007154 // cell communication // inferred from electronic annotation /// 0072593 // reactive oxygen species metabolic process // inferred from electronic annotation","0002102 // podosome // inferred from direct assay /// 0002102 // podosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation","chr10:105353790-105615251 (-) // 96.15 // q24.33"]
["11732291_a_at",0.06212902,-0.03801918,0.003733635,-0.07702923,-0.003733635,0.035723686,0.8520699,0.6101369,1.0169821,0.024294255,1.0169821,"up","FAM186B",84070.0,"","0043234 // protein complex // inferred from direct assay","","chr12:49976658-49999433 (-) // 94.05 // q13.12"]
["11732603_a_at",0.07903099,0.09173727,0.007753372,-0.007753849,-0.13381672,-0.18521357,0.35061285,0.045811426,1.1238389,0.16843525,1.1238389,"up","TRIM45",80263.0,"","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:117653683-117664476 (-) // 90.94 // p13.1"]
["11757251_at",0.029451847,0.08318949,-0.028639078,-0.11855769,-0.14970422,0.028639078,0.5491866,0.1660035,1.0776398,0.107875064,1.0776398,"up","HPVC1",3262.0,"","","","chr7:54268916-54270114 (-) // 43.66 // p11.2"]
["11727994_at",-0.06340885,-0.20537138,0.0754652,-0.0051112175,0.02160263,0.0051112175,0.7583246,0.42874452,-1.0509101,-0.07163928,1.0509101,"down","STX11",8676.0,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006944 // cellular membrane fusion // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation","0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005484 // SNAP receptor activity // inferred from electronic annotation /// 0005484 // SNAP receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr6:144471653-144513075 (+) // 80.96 // q24.2"]
["11743329_a_at",0.18429184,0.12757015,-0.04614067,-0.0023818016,0.0023813248,-0.12040043,0.5691744,0.1834126,1.0933137,0.1287074,1.0933137,"up","PGP",283871.0,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation","","0008967 // phosphoglycolate phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation","chr16:2260888-2264843 (-) // 87.27 // p13.3"]
["11732222_s_at",-6.008148E-4,-0.054361343,6.008148E-4,0.023877144,0.17000389,-0.025568962,0.6660905,0.29358923,-1.0527949,-0.07422445,1.0527949,"down","FAM18B1 /// FAM18B2","201158 /// 51030","","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr17:18684307-18710026 (+) // 94.58 // p11.2 /// chr17:15440294-15467151 (-) // 93.58 // p12"]
["11746493_a_at",0.018527985,0.008776903,-0.09044647,-0.016073942,-0.008776665,0.10445809,0.7484818,0.41431746,-1.033532,-0.04758309,1.033532,"down","PIP4K2A",5305.0,"0016310 // phosphorylation // non-traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0035855 // megakaryocyte development // inferred from electronic annotation /// 0046488 // phosphatidylinositol metabolic process // inferred from electronic annotation /// 0046854 // phosphatidylinositol phosphorylation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016307 // phosphatidylinositol phosphate kinase activity // inferred from electronic annotation /// 0016308 // 1-phosphatidylinositol-4-phosphate 5-kinase activity // non-traceable author statement /// 0016309 // 1-phosphatidylinositol-5-phosphate 4-kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr10:22825666-22880642 (-) // 90.86 // p12.2"]
["11752518_a_at",-0.04239416,-0.056738377,0.04239416,0.17448664,-0.099980354,0.07387304,0.7831633,0.47075415,-1.0485332,-0.06837254,1.0485332,"down","ATG2B",55102.0,"","","","chr14:96756472-96777600 (-) // 99.95 // q32.2"]
["11748920_x_at",-0.02202034,-0.05489731,-0.16179037,0.056495667,0.02202034,0.16592598,0.37618676,0.056310095,-1.1181006,-0.16105005,1.1181006,"down","SLC11A1",6556.0,"0000060 // protein import into nucleus, translocation // inferred from electronic annotation /// 0001818 // negative regulation of cytokine production // inferred from sequence or structural similarity /// 0001818 // negative regulation of cytokine production // inferred from electronic annotation /// 0001819 // positive regulation of cytokine production // inferred from sequence or structural similarity /// 0001819 // positive regulation of cytokine production // inferred from electronic annotation /// 0002309 // T cell proliferation involved in immune response // inferred from sequence or structural similarity /// 0002309 // T cell proliferation involved in immune response // inferred from electronic annotation /// 0002369 // T cell cytokine production // inferred from sequence or structural similarity /// 0002369 // T cell cytokine production // inferred from electronic annotation /// 0002606 // positive regulation of dendritic cell antigen processing and presentation // inferred from sequence or structural similarity /// 0002606 // positive regulation of dendritic cell antigen processing and presentation // inferred from electronic annotation /// 0002827 // positive regulation of T-helper 1 type immune response // inferred from sequence or structural similarity /// 0002827 // positive regulation of T-helper 1 type immune response // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006826 // iron ion transport // inferred from mutant phenotype /// 0006826 // iron ion transport // inferred from electronic annotation /// 0006828 // manganese ion transport // inferred from sequence or structural similarity /// 0006828 // manganese ion transport // inferred from electronic annotation /// 0006876 // cellular cadmium ion homeostasis // inferred from genetic interaction /// 0006879 // cellular iron ion homeostasis // inferred from mutant phenotype /// 0006909 // phagocytosis // inferred from sequence or structural similarity /// 0006909 // phagocytosis // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from sequence or structural similarity /// 0006954 // inflammatory response // inferred from electronic annotation /// 0006955 // immune response // non-traceable author statement /// 0007035 // vacuolar acidification // inferred from sequence or structural similarity /// 0007035 // vacuolar acidification // inferred from electronic annotation /// 0009617 // response to bacterium // inferred from direct assay /// 0010628 // positive regulation of gene expression // inferred from sequence or structural similarity /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0015707 // nitrite transport // inferred from sequence or structural similarity /// 0015707 // nitrite transport // inferred from electronic annotation /// 0032147 // activation of protein kinase activity // inferred from sequence or structural similarity /// 0032147 // activation of protein kinase activity // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from sequence or structural similarity /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0032623 // interleukin-2 production // inferred from sequence or structural similarity /// 0032623 // interleukin-2 production // inferred from electronic annotation /// 0032632 // interleukin-3 production // inferred from sequence or structural similarity /// 0032632 // interleukin-3 production // inferred from electronic annotation /// 0032729 // positive regulation of interferon-gamma production // inferred from sequence or structural similarity /// 0032729 // positive regulation of interferon-gamma production // inferred from electronic annotation /// 0034341 // response to interferon-gamma // inferred from sequence or structural similarity /// 0034341 // response to interferon-gamma // inferred from electronic annotation /// 0042060 // wound healing // inferred from sequence or structural similarity /// 0042060 // wound healing // inferred from electronic annotation /// 0042116 // macrophage activation // inferred from sequence or structural similarity /// 0042116 // macrophage activation // inferred from electronic annotation /// 0042742 // defense response to bacterium // inferred from sequence or structural similarity /// 0042742 // defense response to bacterium // inferred from electronic annotation /// 0042832 // defense response to protozoan // inferred from sequence or structural similarity /// 0042832 // defense response to protozoan // inferred from electronic annotation /// 0043091 // L-arginine import // inferred from sequence or structural similarity /// 0043091 // L-arginine import // inferred from electronic annotation /// 0045342 // MHC class II biosynthetic process // inferred from sequence or structural similarity /// 0045342 // MHC class II biosynthetic process // inferred from electronic annotation /// 0045730 // respiratory burst // inferred from sequence or structural similarity /// 0045730 // respiratory burst // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048002 // antigen processing and presentation of peptide antigen // inferred from sequence or structural similarity /// 0048002 // antigen processing and presentation of peptide antigen // inferred from electronic annotation /// 0048255 // mRNA stabilization // inferred from sequence or structural similarity /// 0048255 // mRNA stabilization // inferred from electronic annotation /// 0050766 // positive regulation of phagocytosis // inferred from sequence or structural similarity /// 0050766 // positive regulation of phagocytosis // inferred from electronic annotation /// 0050829 // defense response to Gram-negative bacterium // inferred from sequence or structural similarity /// 0050829 // defense response to Gram-negative bacterium // inferred from electronic annotation /// 0055072 // iron ion homeostasis // inferred from sequence or structural similarity /// 0055072 // iron ion homeostasis // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0060586 // multicellular organismal iron ion homeostasis // inferred from sequence or structural similarity /// 0060586 // multicellular organismal iron ion homeostasis // inferred from electronic annotation /// 0070574 // cadmium ion transmembrane transport // inferred from genetic interaction /// 0070839 // divalent metal ion export // inferred from sequence or structural similarity /// 0070839 // divalent metal ion export // inferred from electronic annotation /// 0071421 // manganese ion transmembrane transport // inferred from sequence or structural similarity /// 0071421 // manganese ion transmembrane transport // inferred from electronic annotation","0005764 // lysosome // inferred from sequence or structural similarity /// 0005764 // lysosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from sequence or structural similarity /// 0005770 // late endosome // inferred from electronic annotation /// 0005773 // vacuole // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from mutant phenotype /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0009279 // cell outer membrane // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030670 // phagocytic vesicle membrane // inferred from direct assay /// 0030670 // phagocytic vesicle membrane // inferred from electronic annotation /// 0031902 // late endosome membrane // traceable author statement /// 0070821 // tertiary granule membrane // inferred from direct assay","0005215 // transporter activity // inferred from electronic annotation /// 0005384 // manganese ion transmembrane transporter activity // inferred from sequence or structural similarity /// 0005384 // manganese ion transmembrane transporter activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046915 // transition metal ion transmembrane transporter activity // inferred from genetic interaction /// 0051139 // metal ion:hydrogen antiporter activity // inferred from genetic interaction","chr2:219246995-219258903 (+) // 71.79 // q35"]
["11730609_a_at",0.095971584,-0.13961387,-0.009596586,0.009596586,0.0523355,-0.14829922,0.97157186,0.90971786,1.0076836,0.011042772,1.0076836,"up","EFCAB5",374786.0,"","","0005509 // calcium ion binding // inferred from electronic annotation","chr17:28268622-28435470 (+) // 99.53 // q11.2"]
["11763612_x_at",-0.123535395,0.110731125,0.07902336,-0.26382828,0.09506035,-0.07902336,0.7738295,0.45604163,1.0752485,0.10467009,1.0752485,"up","GLI2",2736.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0001501 // skeletal system development // inferred from electronic annotation /// 0001501 // skeletal system development // inferred from sequence or structural similarity /// 0001649 // osteoblast differentiation // inferred from direct assay /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001822 // kidney development // inferred from electronic annotation /// 0001822 // kidney development // inferred from sequence or structural similarity /// 0002009 // morphogenesis of an epithelium // inferred from electronic annotation /// 0002076 // osteoblast development // inferred from electronic annotation /// 0002076 // osteoblast development // inferred from sequence or structural similarity /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007224 // smoothened signaling pathway // inferred from direct assay /// 0007224 // smoothened signaling pathway // inferred from electronic annotation /// 0007389 // pattern specification process // inferred from sequence or structural similarity /// 0007389 // pattern specification process // inferred from electronic annotation /// 0007411 // axon guidance // inferred from electronic annotation /// 0007411 // axon guidance // inferred from sequence or structural similarity /// 0007418 // ventral midline development // inferred from sequence or structural similarity /// 0007418 // ventral midline development // inferred from electronic annotation /// 0007442 // hindgut morphogenesis // inferred from electronic annotation /// 0007442 // hindgut morphogenesis // inferred from sequence or structural similarity /// 0007507 // heart development // inferred from electronic annotation /// 0007507 // heart development // inferred from sequence or structural similarity /// 0008283 // cell proliferation // inferred from direct assay /// 0008283 // cell proliferation // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008589 // regulation of smoothened signaling pathway // inferred from electronic annotation /// 0009913 // epidermal cell differentiation // inferred from direct assay /// 0009953 // dorsal/ventral pattern formation // inferred from electronic annotation /// 0009954 // proximal/distal pattern formation // inferred from sequence or structural similarity /// 0021508 // floor plate formation // inferred from electronic annotation /// 0021508 // floor plate formation // inferred from sequence or structural similarity /// 0021513 // spinal cord dorsal/ventral patterning // inferred from sequence or structural similarity /// 0021513 // spinal cord dorsal/ventral patterning // inferred from electronic annotation /// 0021517 // ventral spinal cord development // inferred from sequence or structural similarity /// 0021517 // ventral spinal cord development // inferred from electronic annotation /// 0021696 // cerebellar cortex morphogenesis // inferred from electronic annotation /// 0021696 // cerebellar cortex morphogenesis // inferred from sequence or structural similarity /// 0021775 // smoothened signaling pathway involved in ventral spinal cord interneuron specification // inferred from electronic annotation /// 0021775 // smoothened signaling pathway involved in ventral spinal cord interneuron specification // inferred from sequence or structural similarity /// 0021776 // smoothened signaling pathway involved in spinal cord motor neuron cell fate specification // inferred from electronic annotation /// 0021904 // dorsal/ventral neural tube patterning // inferred from electronic annotation /// 0021915 // neural tube development // inferred from electronic annotation /// 0021938 // smoothened signaling pathway involved in regulation of cerebellar granule cell precursor cell proliferation // inferred from electronic annotation /// 0021965 // spinal cord ventral commissure morphogenesis // inferred from electronic annotation /// 0021965 // spinal cord ventral commissure morphogenesis // inferred from sequence or structural similarity /// 0021983 // pituitary gland development // inferred from electronic annotation /// 0021983 // pituitary gland development // inferred from sequence or structural similarity /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0030324 // lung development // inferred from sequence or structural similarity /// 0030879 // mammary gland development // inferred from sequence or structural similarity /// 0030879 // mammary gland development // inferred from electronic annotation /// 0030902 // hindbrain development // inferred from sequence or structural similarity /// 0030902 // hindbrain development // inferred from electronic annotation /// 0032331 // negative regulation of chondrocyte differentiation // inferred from electronic annotation /// 0033089 // positive regulation of T cell differentiation in thymus // inferred from sequence or structural similarity /// 0035295 // tube development // inferred from sequence or structural similarity /// 0035295 // tube development // inferred from electronic annotation /// 0042475 // odontogenesis of dentin-containing tooth // inferred from electronic annotation /// 0042475 // odontogenesis of dentin-containing tooth // inferred from sequence or structural similarity /// 0042733 // embryonic digit morphogenesis // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from electronic annotation /// 0045740 // positive regulation of DNA replication // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048566 // embryonic digestive tract development // inferred from electronic annotation /// 0048566 // embryonic digestive tract development // inferred from sequence or structural similarity /// 0048589 // developmental growth // inferred from electronic annotation /// 0048589 // developmental growth // inferred from sequence or structural similarity /// 0048646 // anatomical structure formation involved in morphogenesis // inferred from electronic annotation /// 0048666 // neuron development // inferred from sequence or structural similarity /// 0048666 // neuron development // inferred from electronic annotation /// 0048754 // branching morphogenesis of a tube // inferred from electronic annotation /// 0048754 // branching morphogenesis of a tube // inferred from sequence or structural similarity /// 0048856 // anatomical structure development // inferred from electronic annotation /// 0060032 // notochord regression // inferred from electronic annotation /// 0060322 // head development // inferred from electronic annotation /// 0060513 // prostatic bud formation // inferred from electronic annotation /// 0060603 // mammary gland duct morphogenesis // inferred from electronic annotation /// 0060831 // smoothened signaling pathway involved in dorsal/ventral neural tube patterning // inferred from electronic annotation /// 0071407 // cellular response to organic cyclic compound // inferred from electronic annotation /// 0090103 // cochlea morphogenesis // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0031512 // motile primary cilium // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:121554920-121732612 (+) // 99.64 // q14.2"]
["11730611_at",-0.039726496,0.048717737,-0.005125046,0.005125284,-0.05334449,0.043452978,0.98312724,0.9434749,1.0019965,0.0028774939,1.0019965,"up","MCOLN2",255231.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation","chr1:85391267-85462805 (-) // 89.85 // p22.3"]
["11755337_a_at",-0.011404753,-0.13346243,0.011404514,-0.17360616,0.19126058,0.07148552,0.82849336,0.55853486,-1.0527778,-0.07420093,1.0527778,"down","ENPP2",5168.0,"0006796 // phosphate-containing compound metabolic process // traceable author statement /// 0006928 // cellular component movement // traceable author statement /// 0006935 // chemotaxis // non-traceable author statement /// 0006935 // chemotaxis // inferred from electronic annotation /// 0006955 // immune response // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0016042 // lipid catabolic process // inferred from electronic annotation /// 0030334 // regulation of cell migration // inferred from direct assay /// 0034638 // phosphatidylcholine catabolic process // inferred from direct assay","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from sequence or structural similarity /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004528 // phosphodiesterase I activity // traceable author statement /// 0004551 // nucleotide diphosphatase activity // traceable author statement /// 0004622 // lysophospholipase activity // inferred from direct assay /// 0005044 // scavenger receptor activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from sequence or structural similarity /// 0008134 // transcription factor binding // traceable author statement /// 0008270 // zinc ion binding // inferred from sequence or structural similarity /// 0016787 // hydrolase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0030247 // polysaccharide binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047391 // alkylglycerophosphoethanolamine phosphodiesterase activity // inferred from electronic annotation","chr8:120569498-120605248 (-) // 98.27 // q24.12"]
["11725253_at",0.026741982,-0.030005455,0.055947304,-0.0333066,0.04253435,-0.026741982,0.81904787,0.54042923,1.0163515,0.023399383,1.0163515,"up","HNF1B",6928.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001714 // endodermal cell fate specification // inferred from electronic annotation /// 0001822 // kidney development // inferred from direct assay /// 0001822 // kidney development // inferred from mutant phenotype /// 0001822 // kidney development // inferred from electronic annotation /// 0001826 // inner cell mass cell differentiation // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007492 // endoderm development // inferred from electronic annotation /// 0009749 // response to glucose stimulus // inferred from electronic annotation /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0030073 // insulin secretion // inferred from electronic annotation /// 0030111 // regulation of Wnt receptor signaling pathway // inferred from electronic annotation /// 0030902 // hindbrain development // inferred from electronic annotation /// 0031018 // endocrine pancreas development // inferred from mutant phenotype /// 0035565 // regulation of pronephros size // inferred from mutant phenotype /// 0039020 // pronephric nephron tubule development // inferred from genetic interaction /// 0042663 // regulation of endodermal cell fate specification // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048557 // embryonic digestive tract morphogenesis // inferred from electronic annotation /// 0048754 // branching morphogenesis of a tube // inferred from electronic annotation /// 0048793 // pronephros development // inferred from mutant phenotype /// 0048806 // genitalia development // inferred from mutant phenotype /// 0050673 // epithelial cell proliferation // inferred from electronic annotation /// 0060261 // positive regulation of transcription initiation from RNA polymerase II promoter // inferred from direct assay /// 0060429 // epithelium development // inferred from electronic annotation /// 0060677 // ureteric bud elongation // inferred from electronic annotation /// 0061017 // hepatoblast differentiation // inferred from electronic annotation /// 0072095 // regulation of branch elongation involved in ureteric bud branching // inferred from electronic annotation /// 0072176 // nephric duct development // inferred from electronic annotation /// 0072177 // mesonephric duct development // inferred from electronic annotation /// 0072179 // nephric duct formation // inferred from electronic annotation /// 0072181 // mesonephric duct formation // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay","0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr17:36046434-36105096 (-) // 98.68 // q12"]
["11742059_a_at",0.0051374435,-0.0051374435,0.014447212,-0.055038452,0.05888939,-0.07725048,0.81351554,0.5291314,1.0205042,0.029282171,1.0205042,"up","CHORDC1",26973.0,"0006950 // response to stress // inferred from electronic annotation /// 0010824 // regulation of centrosome duplication // inferred from electronic annotation /// 0061077 // chaperone-mediated protein folding // inferred from sequence or structural similarity /// 0061077 // chaperone-mediated protein folding // inferred from electronic annotation /// 0080134 // regulation of response to stress // inferred from sequence or structural similarity /// 0080134 // regulation of response to stress // inferred from electronic annotation /// 2000299 // negative regulation of Rho-dependent protein serine/threonine kinase activity // inferred from electronic annotation","","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051879 // Hsp90 protein binding // inferred from physical interaction","chr11:89933599-89956532 (-) // 99.25 // q14.3"]
["11716144_a_at",-0.012660027,-0.11029482,-0.032081127,0.012660027,0.20792198,0.2128725,0.3687115,0.053498436,-1.1456478,-0.19616355,1.1456478,"down","PDCD6IP",10015.0,"0006810 // transport // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation /// 0048306 // calcium-dependent protein binding // inferred from physical interaction","chr3:33839556-33911194 (+) // 94.95 // p22.3"]
["11755037_s_at",-0.023771286,-0.039173126,-0.1473093,0.023771286,0.027911186,0.11782265,0.3920596,0.06288442,-1.0917075,-0.12658632,1.0917075,"down","KIAA0319L",79932.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0044433 // cytoplasmic vesicle part // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr1:35899092-36023004 (-) // 84.05 // p34.3"]
["11750878_a_at",-0.15300655,-0.08514261,-0.13267136,0.19256592,0.08514261,0.14289713,0.11400244,0.002042558,-1.2006443,-0.26380876,1.2006443,"down","ISM2",145501.0,"","0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay","","chr14:77941499-77965159 (-) // 94.09 // q24.3"]
["11742643_x_at",-0.032266617,-0.022280693,0.111296654,-0.03314686,0.120554924,0.022280693,0.9322621,0.7979764,-1.0123067,-0.017646438,1.0123067,"down","MBD3L5",284428.0,"","","","chr19:7030593-7033022 (+) // 100.0 // p13.2 /// chr19:7037754-7040184 (-) // 99.48 // p13.2 /// chr19:7056215-7058645 (-) // 99.22 // p13.2"]
["11739679_a_at",-0.018512726,-0.06775832,0.018512726,0.07358122,0.11617994,-0.14629197,0.88592196,0.6854783,-1.0260321,-0.03707585,1.0260321,"down","NTRK2",4915.0,"0001764 // neuron migration // inferred from sequence or structural similarity /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // traceable author statement /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0007190 // activation of adenylate cyclase activity // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007612 // learning // inferred from sequence or structural similarity /// 0008284 // positive regulation of cell proliferation // inferred from sequence or structural similarity /// 0010628 // positive regulation of gene expression // inferred from sequence or structural similarity /// 0010976 // positive regulation of neuron projection development // inferred from sequence or structural similarity /// 0014068 // positive regulation of phosphatidylinositol 3-kinase cascade // inferred from sequence or structural similarity /// 0016310 // phosphorylation // inferred from electronic annotation /// 0021954 // central nervous system neuron development // inferred from sequence or structural similarity /// 0021987 // cerebral cortex development // inferred from sequence or structural similarity /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from sequence or structural similarity /// 0031547 // brain-derived neurotrophic factor receptor signaling pathway // inferred from mutant phenotype /// 0032314 // regulation of Rac GTPase activity // inferred from sequence or structural similarity /// 0043410 // positive regulation of MAPK cascade // inferred from sequence or structural similarity /// 0043524 // negative regulation of neuron apoptotic process // inferred from sequence or structural similarity /// 0046777 // protein autophosphorylation // inferred from sequence or structural similarity /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0050772 // positive regulation of axonogenesis // inferred from sequence or structural similarity","0005768 // endosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005030 // neurotrophin receptor activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from sequence or structural similarity /// 0043121 // neurotrophin binding // inferred from direct assay /// 0043121 // neurotrophin binding // inferred from sequence or structural similarity /// 0048403 // brain-derived neurotrophic factor binding // inferred from sequence or structural similarity /// 0060175 // brain-derived neurotrophic factor-activated receptor activity // inferred from mutant phenotype","chr9:87283465-87638505 (+) // 98.13 // q21.33"]
["11725957_x_at",-0.005382538,0.005382538,0.031399727,0.0066833496,-0.006362915,-0.0208292,0.64605117,0.26930243,1.0120656,0.017302874,1.0120656,"up","TIMM17A",10440.0,"0006626 // protein targeting to mitochondrion // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement","0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005744 // mitochondrial inner membrane presequence translocase complex // inferred from direct assay /// 0005744 // mitochondrial inner membrane presequence translocase complex // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031305 // integral to mitochondrial inner membrane // inferred from direct assay","0015450 // P-P-bond-hydrolysis-driven protein transmembrane transporter activity // inferred from electronic annotation","chr1:201924611-201939787 (+) // 95.09 // q32.1"]
["11748674_x_at",0.07902956,0.12646866,-0.07902956,-0.14562368,-0.16353703,0.10294676,0.709879,0.35488918,1.0798974,0.110894255,1.0798974,"up","AFF4",27125.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0007286 // spermatid development // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay","0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr5:132239554-132299206 (-) // 79.87 // q31.1"]
["11742088_at",0.007766247,-0.026808977,-0.0077660084,-0.18793678,0.043694496,0.012943745,0.8748151,0.659512,1.0244361,0.03483002,1.0244361,"up","ANKK1",255239.0,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation","","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr11:113258512-113271140 (+) // 94.34 // q23.2"]
["11748317_s_at",-0.020551682,-0.028715134,0.020551682,0.030452728,0.04659176,-0.12846375,0.96848893,0.9023152,1.0052595,0.00756799,1.0052595,"up","MCFD2",90411.0,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0019752 // carboxylic acid metabolic process // inferred from electronic annotation /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0012507 // ER to Golgi transport vesicle membrane // traceable author statement","0005509 // calcium ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:47131967-47168994 (-) // 68.26 // p21"]
["11755089_a_at",0.068071365,0.032940388,-0.033350468,-0.035992146,-0.027527332,0.02752781,0.7320637,0.38898426,1.024238,0.034550976,1.024238,"up","ZNF615",284370.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:52494723-52507153 (-) // 78.2 // q13.41"]
["11728080_a_at",0.1979866,0.0,-0.050200224,-0.19080949,0.0,0.102817774,0.8141665,0.53061694,1.0559875,0.078592725,1.0559875,"up","TBC1D22B",55633.0,"0032313 // regulation of Rab GTPase activity // inferred from electronic annotation /// 0032851 // positive regulation of Rab GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005097 // Rab GTPase activator activity // inferred from electronic annotation","chr6:37225540-37300745 (+) // 97.69 // p21.2"]
["11759502_at",0.023920536,0.074863434,-0.023921013,-0.02709341,-0.08917093,0.05142975,0.7407821,0.4016849,1.0328035,0.046565842,1.0328035,"up","TRAF3",7187.0,"0001817 // regulation of cytokine production // inferred from sequence or structural similarity /// 0001817 // regulation of cytokine production // inferred from electronic annotation /// 0002224 // toll-like receptor signaling pathway // inferred from sequence or structural similarity /// 0002224 // toll-like receptor signaling pathway // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0030162 // regulation of proteolysis // inferred from mutant phenotype /// 0030162 // regulation of proteolysis // inferred from electronic annotation /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from mutant phenotype /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from electronic annotation /// 0032480 // negative regulation of type I interferon production // traceable author statement /// 0032648 // regulation of interferon-beta production // inferred from sequence or structural similarity /// 0032648 // regulation of interferon-beta production // inferred from electronic annotation /// 0033209 // tumor necrosis factor-mediated signaling pathway // inferred from mutant phenotype /// 0033209 // tumor necrosis factor-mediated signaling pathway // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0050688 // regulation of defense response to virus // inferred from sequence or structural similarity /// 0050688 // regulation of defense response to virus // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0009898 // internal side of plasma membrane // inferred from sequence or structural similarity /// 0009898 // internal side of plasma membrane // inferred from electronic annotation /// 0035631 // CD40 receptor complex // inferred from sequence or structural similarity /// 0035631 // CD40 receptor complex // inferred from electronic annotation","0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0004871 // signal transducer activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0031996 // thioesterase binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr14:103243815-103377837 (+) // 96.73 // q32.32"]
["11758049_s_at",-0.03874445,-0.13573027,-0.0016188622,0.016303062,0.001619339,0.039537907,0.50923276,0.13373661,-1.055445,-0.07785134,1.055445,"down","TIA1",7072.0,"0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // traceable author statement /// 0017148 // negative regulation of translation // inferred from electronic annotation /// 0042036 // negative regulation of cytokine biosynthetic process // inferred from electronic annotation /// 0048024 // regulation of nuclear mRNA splicing, via spliceosome // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008143 // poly(A) RNA binding // traceable author statement /// 0017091 // AU-rich element binding // inferred from electronic annotation","chr2:70436575-70437024 (-) // 100.0 // p13.3"]
["11738062_x_at",-0.2541144,-0.0019078255,0.12147784,-0.15704656,0.08144784,0.001907587,0.96252626,0.8843472,-1.0141594,-0.020284483,1.0141594,"down","S100A7A",338324.0,"","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:153390419-153395697 (+) // 79.13 // q21.3"]
["11749614_a_at",0.013415337,-0.0020132065,0.15173054,0.0020132065,-0.020641327,-0.051766396,0.5905844,0.20380811,1.0554384,0.07784238,1.0554384,"up","UBE2I",7329.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006464 // cellular protein modification process // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007059 // chromosome segregation // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0010469 // regulation of receptor activity // inferred from electronic annotation /// 0016567 // protein ubiquitination // traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0016925 // protein sumoylation // inferred from direct assay /// 0016925 // protein sumoylation // inferred from electronic annotation /// 0033145 // positive regulation of intracellular steroid hormone receptor signaling pathway // inferred from electronic annotation /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0000795 // synaptonemal complex // traceable author statement /// 0001650 // fibrillar center // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016604 // nuclear body // inferred from electronic annotation /// 0016605 // PML body // inferred from direct assay /// 0030425 // dendrite // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein ligase activity // traceable author statement /// 0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008022 // protein C-terminus binding // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from physical interaction /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation /// 0019789 // SUMO ligase activity // inferred from direct assay /// 0019789 // SUMO ligase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0043398 // HLH domain binding // inferred from electronic annotation /// 0043425 // bHLH transcription factor binding // inferred from electronic annotation","chr16:1364031-1371295 (+) // 96.07 // p13.3"]
["11733595_x_at",0.031483173,-0.08552885,-0.109037876,-0.010294914,0.20501995,0.010294914,0.5918202,0.20530762,-1.0887715,-0.12270115,1.0887715,"down","PLEKHG6",55200.0,"0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation","0000922 // spindle pole // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0032154 // cleavage furrow // inferred from electronic annotation","0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation","chr12:6420098-6437671 (+) // 94.9 // p13.31"]
["11740062_a_at",0.04431343,-0.0055761337,0.122982025,0.0055761337,-0.12041283,-0.005988121,0.54560256,0.1615539,1.0674596,0.09418145,1.0674596,"up","SIGMAR1",10280.0,"0006696 // ergosterol biosynthetic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0038003 // opioid receptor signaling pathway // inferred from electronic annotation /// 0043523 // regulation of neuron apoptotic process // inferred from mutant phenotype","0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from direct assay /// 0005637 // nuclear inner membrane // inferred from electronic annotation /// 0005640 // nuclear outer membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005811 // lipid particle // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030426 // growth cone // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0000247 // C-8 sterol isomerase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004985 // opioid receptor activity // inferred from electronic annotation /// 0008144 // drug binding // traceable author statement","chr9:34634719-34637806 (-) // 94.43 // p13.3"]
["11744338_a_at",-0.021353722,-0.06529999,-0.01654625,0.06692982,0.01654625,0.01782322,0.33285198,0.03987577,-1.0483834,-0.06816635,1.0483834,"down","COPS7A",50813.0,"0010388 // cullin deneddylation // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0008180 // signalosome // inferred from direct assay /// 0008180 // signalosome // inferred from electronic annotation","","chr12:6807789-6841031 (+) // 98.43 // p13.31"]
["11738440_at",-0.057747364,0.003894329,0.06009245,-0.003894329,0.08531332,-0.08096886,0.99274343,0.9754225,1.0013385,0.0019297301,1.0013385,"up","FGF22",27006.0,"0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0030154 // cell differentiation // non-traceable author statement","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // non-traceable author statement /// 0005730 // nucleolus // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation","0008083 // growth factor activity // inferred from electronic annotation","chr19:639894-643703 (+) // 94.56 // p13.3"]
["11738948_at",0.08150101,0.021870852,0.07362342,-0.06596899,-0.021870852,-0.12517619,0.2636827,0.02113412,1.0942966,0.13000378,1.0942966,"up","C11orf40",143501.0,"","","","chr11:4592652-4594703 (-) // 56.57 // p15.4"]
["11761930_at",-0.16712332,0.05171442,0.14269686,0.03601837,-0.18834734,-0.03601837,0.82908475,0.5601436,1.0510843,0.07187835,1.0510843,"up","OK/SW-CL.58",1.00131766E8,"","","","chr13:30165242-30167180 (-) // 83.97 // q12.3"]
["11715354_a_at",-0.25855732,0.014040232,0.08713889,-0.050002337,0.1306665,-0.014040232,0.8307746,0.5637648,-1.0531182,-0.07466741,1.0531182,"down","COL1A2",1278.0,"0001501 // skeletal system development // inferred from mutant phenotype /// 0001568 // blood vessel development // inferred from mutant phenotype /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from direct assay /// 0007266 // Rho protein signal transduction // inferred from direct assay /// 0007411 // axon guidance // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008217 // regulation of blood pressure // inferred from mutant phenotype /// 0030168 // platelet activation // traceable author statement /// 0030199 // collagen fibril organization // inferred from mutant phenotype /// 0042476 // odontogenesis // non-traceable author statement /// 0043589 // skin morphogenesis // inferred from mutant phenotype /// 0050900 // leukocyte migration // traceable author statement /// 0070208 // protein heterotrimerization // inferred from electronic annotation /// 0071230 // cellular response to amino acid stimulus // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005581 // collagen // inferred from electronic annotation /// 0005584 // collagen type I // inferred from direct assay /// 0005584 // collagen type I // inferred from mutant phenotype /// 0005584 // collagen type I // traceable author statement /// 0005584 // collagen type I // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0031012 // extracellular matrix // inferred from direct assay","0005201 // extracellular matrix structural constituent // non-traceable author statement /// 0005201 // extracellular matrix structural constituent // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0030674 // protein binding, bridging // inferred from mutant phenotype /// 0042802 // identical protein binding // inferred from direct assay /// 0046332 // SMAD binding // inferred from electronic annotation /// 0048407 // platelet-derived growth factor binding // inferred from direct assay","chr7:94023872-94060539 (+) // 98.1 // q21.3"]
["11723784_a_at",0.12023592,-0.015352726,0.034110546,0.015352726,-0.10683918,-0.07192707,0.50957054,0.13402855,1.0723697,0.100802355,1.0723697,"up","LIMCH1",22998.0,"0031032 // actomyosin structure organization // inferred from electronic annotation","","0003779 // actin binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr4:41362803-41702061 (+) // 97.9 // p13"]
["11756233_a_at",0.038431168,0.022916794,0.19475937,-0.03624487,-0.063761234,-0.02291584,0.43760675,0.087753706,1.0915234,0.12634307,1.0915234,"up","AKIRIN2",55122.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0032755 // positive regulation of interleukin-6 production // inferred from electronic annotation /// 0045087 // innate immune response // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0017053 // transcriptional repressor complex // inferred from sequence or structural similarity /// 0017053 // transcriptional repressor complex // inferred from electronic annotation","","chr6:88384612-88411934 (-) // 96.9 // q15"]
["11739683_x_at",0.05939865,0.0016999245,0.09640026,-0.0016999245,-0.00783968,-0.048093796,0.42960596,0.08281325,1.0509622,0.071710795,1.0509622,"up","PHF2",5253.0,"0001889 // liver development // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006482 // protein demethylation // inferred from direct assay /// 0016568 // chromatin modification // inferred from electronic annotation /// 0033169 // histone H3-K9 demethylation // inferred from direct assay /// 0033169 // histone H3-K9 demethylation // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0061188 // negative regulation of chromatin silencing at rDNA // inferred from mutant phenotype","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation","0003713 // transcription coactivator activity // inferred from direct assay /// 0005506 // iron ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016702 // oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen // inferred from electronic annotation /// 0032452 // histone demethylase activity // inferred from direct assay /// 0032454 // histone demethylase activity (H3-K9 specific) // inferred from direct assay /// 0035064 // methylated histone residue binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:96338908-96441869 (+) // 92.34 // q22.31"]
["11718383_a_at",0.014787674,0.025557518,-0.0015640259,0.0015640259,-0.004948616,-0.06618118,0.5767303,0.19104083,1.0253494,0.03611558,1.0253494,"up","AIFM1",9131.0,"0006309 // apoptotic DNA fragmentation // inferred from electronic annotation /// 0006309 // apoptotic DNA fragmentation // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0030182 // neuron differentiation // inferred from direct assay /// 0032981 // mitochondrial respiratory chain complex I assembly // inferred from mutant phenotype /// 0045454 // cell redox homeostasis // inferred from electronic annotation /// 0051402 // neuron apoptotic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0070059 // intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress // inferred from electronic annotation /// 0070059 // intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress // inferred from sequence or structural similarity","0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005739 // mitochondrion // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005758 // mitochondrial intermembrane space // inferred from direct assay /// 0005758 // mitochondrial intermembrane space // inferred from mutant phenotype /// 0005758 // mitochondrial intermembrane space // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0044455 // mitochondrial membrane part // inferred from mutant phenotype /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0009055 // electron carrier activity // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0050660 // flavin adenine dinucleotide binding // inferred from electronic annotation","chrX:129263336-129299808 (-) // 97.27 // q26.1"]
["11758934_x_at",0.029117107,-0.19241476,0.018498898,0.011264324,-0.011264324,-0.102256775,0.95704097,0.868003,-1.0098778,-0.014180732,1.0098778,"down","RAB27A",5873.0,"0006184 // GTP catabolic process // inferred from sequence or structural similarity /// 0006184 // GTP catabolic process // traceable author statement /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006605 // protein targeting // inferred from electronic annotation /// 0006887 // exocytosis // inferred from direct assay /// 0006887 // exocytosis // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007596 // blood coagulation // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0030318 // melanocyte differentiation // inferred from electronic annotation /// 0032400 // melanosome localization // inferred from electronic annotation /// 0032402 // melanosome transport // inferred from electronic annotation /// 0043316 // cytotoxic T cell degranulation // inferred from electronic annotation /// 0043320 // natural killer cell degranulation // inferred from electronic annotation /// 0043473 // pigmentation // inferred from electronic annotation /// 0045921 // positive regulation of exocytosis // inferred from mutant phenotype /// 0051875 // pigment granule localization // inferred from electronic annotation /// 0051904 // pigment granule transport // inferred from electronic annotation /// 0071985 // multivesicular body sorting pathway // inferred from mutant phenotype","0001750 // photoreceptor outer segment // inferred from electronic annotation /// 0005764 // lysosome // inferred from direct assay /// 0005764 // lysosome // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from direct assay /// 0005770 // late endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0030141 // secretory granule // inferred from electronic annotation /// 0030425 // dendrite // inferred from direct assay /// 0030667 // secretory granule membrane // inferred from electronic annotation /// 0032585 // multivesicular body membrane // inferred from direct assay /// 0042470 // melanosome // inferred from direct assay /// 0042470 // melanosome // inferred from electronic annotation /// 0070382 // exocytic vesicle // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from sequence or structural similarity /// 0003924 // GTPase activity // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from sequence or structural similarity /// 0005525 // GTP binding // inferred from electronic annotation /// 0031489 // myosin V binding // inferred from electronic annotation","chr15:55495166-55582045 (-) // 87.33 // q21.3"]
["11747010_a_at",0.019694328,-0.019694328,0.03647685,-0.13239908,0.2869203,-0.019694328,0.93613476,0.80814004,-1.0229838,-0.032783285,1.0229838,"down","VSIG4",11326.0,"0006957 // complement activation, alternative pathway // inferred from electronic annotation /// 0032703 // negative regulation of interleukin-2 production // inferred from electronic annotation /// 0042130 // negative regulation of T cell proliferation // inferred from electronic annotation /// 0045087 // innate immune response // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chrX:65241609-65259891 (-) // 99.36 // q12"]
["11751310_a_at",0.020783901,-0.011024475,0.044227123,0.011024475,-0.029242516,-0.086936474,0.5642096,0.17929746,1.0374538,0.05304705,1.0374538,"up","SNIP1",79753.0,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007249 // I-kappaB kinase/NF-kappaB cascade // inferred from electronic annotation /// 0031047 // gene silencing by RNA // inferred from electronic annotation /// 0035196 // production of miRNAs involved in gene silencing by miRNA // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr1:38003154-38019905 (-) // 99.79 // p34.3"]
["11717475_a_at",-0.078884125,0.06707883,0.070290565,0.01500988,-0.01500988,-0.17525005,0.7188526,0.3680888,1.0554892,0.077911794,1.0554892,"up","CHGB",1114.0,"","0005576 // extracellular region // inferred from electronic annotation /// 0030141 // secretory granule // inferred from electronic annotation","0005179 // hormone activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr20:5891792-5906007 (+) // 98.54 // p12.3"]
["11715406_a_at",-0.0018897057,0.13521957,-0.04846573,-0.0061359406,0.0018901825,0.004565716,0.8637089,0.6367055,1.0197259,0.028181437,1.0197259,"up","COL6A1",1291.0,"0007155 // cell adhesion // non-traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0070208 // protein heterotrimerization // inferred from physical interaction /// 0071230 // cellular response to amino acid stimulus // inferred from electronic annotation","0005576 // extracellular region // inferred from direct assay /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005581 // collagen // inferred from electronic annotation /// 0005589 // collagen type VI // non-traceable author statement /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from sequence or structural similarity /// 0042383 // sarcolemma // inferred from electronic annotation /// 0043234 // protein complex // inferred from physical interaction","0048407 // platelet-derived growth factor binding // inferred from direct assay","chr21:47401644-47424962 (+) // 97.83 // q22.3"]
["11746099_a_at",0.04446745,-0.013583183,0.014844418,-0.05875826,-0.12113905,0.013583183,0.55484945,0.17068915,1.0502123,0.070680946,1.0502123,"up","PPP4R1",9989.0,"0006468 // protein phosphorylation // inferred from sequence or structural similarity /// 0007165 // signal transduction // non-traceable author statement","0030289 // protein phosphatase 4 complex // inferred from sequence or structural similarity","0004721 // phosphoprotein phosphatase activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0030362 // protein phosphatase type 4 regulator activity // non-traceable author statement","chr18:9547710-9614513 (-) // 99.76 // p11.22"]
["11735786_at",0.0,0.0,0.19843197,-0.04938793,0.18225765,-0.04279399,0.9086429,0.7383563,1.0253516,0.036118764,1.0253516,"up","BARX2",8538.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001502 // cartilage condensation // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0014902 // myotube differentiation // inferred from electronic annotation /// 0042637 // catagen // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from electronic annotation","0000976 // transcription regulatory region sequence-specific DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr11:129245834-129322174 (+) // 87.33 // q24.3"]
["11718968_a_at",-0.11641264,3.271103E-4,-0.042137623,-3.271103E-4,0.04960966,0.09527683,0.42960596,0.082959905,-1.0724627,-0.10092744,1.0724627,"down","DDX6",1656.0,"0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0033962 // cytoplasmic mRNA processing body assembly // inferred from direct assay /// 0043928 // exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay // traceable author statement","0000932 // cytoplasmic mRNA processing body // inferred from direct assay /// 0000932 // cytoplasmic mRNA processing body // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0010494 // cytoplasmic stress granule // inferred from direct assay /// 0016442 // RNA-induced silencing complex // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003724 // RNA helicase activity // traceable author statement /// 0004386 // helicase activity // traceable author statement /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr11:118618471-118662060 (-) // 91.83 // q23.3"]
["11736488_a_at",-0.16178799,0.099583626,-0.13165665,0.05820942,0.0016870499,-0.001686573,0.72466344,0.37793255,-1.0599701,-0.084023625,1.0599701,"down","MIR4800 /// MXD4","100616358 /// 10608","0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // traceable author statement","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003714 // transcription corepressor activity // traceable author statement","chr4:2249159-2263840 (-) // 93.79 // p16.3"]
["11733280_a_at",0.07141256,-0.07141256,0.2852955,-0.07141256,0.18020248,-0.07246113,0.8325546,0.567702,1.0592102,0.082988895,1.0592102,"up","ACHE",43.0,"0001507 // acetylcholine catabolic process in synaptic cleft // non-traceable author statement /// 0001919 // regulation of receptor recycling // inferred from electronic annotation /// 0002076 // osteoblast development // inferred from expression pattern /// 0006260 // DNA replication // traceable author statement /// 0006581 // acetylcholine catabolic process // inferred from direct assay /// 0006581 // acetylcholine catabolic process // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from direct assay /// 0007155 // cell adhesion // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007271 // synaptic transmission, cholinergic // not recorded /// 0007399 // nervous system development // traceable author statement /// 0007416 // synapse assembly // not recorded /// 0007416 // synapse assembly // traceable author statement /// 0007517 // muscle organ development // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0009611 // response to wounding // traceable author statement /// 0019695 // choline metabolic process // not recorded /// 0031623 // receptor internalization // inferred from electronic annotation /// 0032223 // negative regulation of synaptic transmission, cholinergic // inferred by curator /// 0042135 // neurotransmitter catabolic process // inferred from electronic annotation /// 0042136 // neurotransmitter biosynthetic process // traceable author statement /// 0042982 // amyloid precursor protein metabolic process // traceable author statement /// 0045212 // neurotransmitter receptor biosynthetic process // inferred from electronic annotation /// 0048814 // regulation of dendrite morphogenesis // not recorded /// 0050714 // positive regulation of protein secretion // traceable author statement /// 0050770 // regulation of axonogenesis // not recorded /// 0051262 // protein tetramerization // inferred from electronic annotation /// 0060041 // retina development in camera-type eye // inferred from electronic annotation","0005576 // extracellular region // inferred from direct assay /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005605 // basal lamina // non-traceable author statement /// 0005605 // basal lamina // inferred from electronic annotation /// 0005615 // extracellular space // not recorded /// 0005615 // extracellular space // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // not recorded /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // not recorded /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030424 // axon // not recorded /// 0030425 // dendrite // not recorded /// 0031225 // anchored to membrane // inferred from electronic annotation /// 0031594 // neuromuscular junction // not recorded /// 0031594 // neuromuscular junction // inferred from electronic annotation /// 0042734 // presynaptic membrane // not recorded /// 0043083 // synaptic cleft // non-traceable author statement /// 0045202 // synapse // inferred from direct assay /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // not recorded /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0001540 // beta-amyloid binding // traceable author statement /// 0003990 // acetylcholinesterase activity // inferred from direct assay /// 0003990 // acetylcholinesterase activity // inferred from mutant phenotype /// 0003990 // acetylcholinesterase activity // inferred from electronic annotation /// 0004091 // carboxylesterase activity // not recorded /// 0004091 // carboxylesterase activity // inferred from electronic annotation /// 0004104 // cholinesterase activity // inferred from direct assay /// 0004104 // cholinesterase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005518 // collagen binding // inferred from direct assay /// 0016787 // hydrolase activity // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0017171 // serine hydrolase activity // inferred from direct assay /// 0042166 // acetylcholine binding // inferred from direct assay /// 0042166 // acetylcholine binding // non-traceable author statement /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0042803 // protein homodimerization activity // non-traceable author statement /// 0043236 // laminin binding // inferred from direct assay /// 0043236 // laminin binding // inferred from electronic annotation /// 0043621 // protein self-association // inferred from electronic annotation","chr7:100487614-100493522 (-) // 91.21 // q22.1"]
["11722643_a_at",0.058232784,0.0021305084,-0.0021309853,0.0058660507,-0.10875082,-0.061894417,0.49904668,0.12597139,1.0528772,0.07433716,1.0528772,"up","BRPF1",7862.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0043966 // histone H3 acetylation // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0070776 // MOZ/MORF histone acetyltransferase complex // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:9773431-9789685 (+) // 96.63 // p25.3"]
["11723893_s_at",0.08110762,0.027961254,0.11646366,-0.059470177,-0.0601449,-0.027961731,0.20515984,0.011077261,1.0900315,0.12436983,1.0900315,"up","CREBBP",1387.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0001666 // response to hypoxia // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006461 // protein complex assembly // traceable author statement /// 0007165 // signal transduction // non-traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007219 // Notch signaling pathway // traceable author statement /// 0008283 // cell proliferation // inferred from electronic annotation /// 0008589 // regulation of smoothened signaling pathway // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016573 // histone acetylation // inferred from direct assay /// 0016573 // histone acetylation // inferred from electronic annotation /// 0018076 // N-terminal peptidyl-lysine acetylation // inferred from direct assay /// 0030718 // germ-line stem cell maintenance // inferred from electronic annotation /// 0033261 // regulation of S phase // inferred from electronic annotation /// 0042592 // homeostatic process // non-traceable author statement /// 0042733 // embryonic digit morphogenesis // traceable author statement /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0000123 // histone acetyltransferase complex // inferred from electronic annotation /// 0000790 // nuclear chromatin // inferred from direct assay /// 0000940 // condensed chromosome outer kinetochore // inferred from electronic annotation /// 0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0016604 // nuclear body // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation","0000987 // core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0001078 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription // inferred from direct assay /// 0001085 // RNA polymerase II transcription factor binding // inferred from physical interaction /// 0001102 // RNA polymerase II activating transcription factor binding // traceable author statement /// 0001105 // RNA polymerase II transcription coactivator activity // traceable author statement /// 0001191 // RNA polymerase II transcription factor binding transcription factor activity involved in negative regulation of transcription // inferred from direct assay /// 0002039 // p53 binding // inferred from physical interaction /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003712 // transcription cofactor activity // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from physical interaction /// 0003713 // transcription coactivator activity // traceable author statement /// 0004402 // histone acetyltransferase activity // inferred from direct assay /// 0004402 // histone acetyltransferase activity // inferred from electronic annotation /// 0004871 // signal transducer activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016407 // acetyltransferase activity // inferred from direct assay /// 0016407 // acetyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0042975 // peroxisome proliferator activated receptor binding // inferred from electronic annotation /// 0043426 // MRF binding // inferred from direct assay /// 0046332 // SMAD binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:3774985-3930722 (-) // 93.09 // p13.3"]
["11756205_x_at",-0.06472397,-0.03897381,0.09170532,9.860992E-4,0.038422585,-9.860992E-4,0.9152616,0.75412583,-1.0117165,-0.016805058,1.0117165,"down","DCAF6",55827.0,"0016567 // protein ubiquitination // inferred by curator /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from genetic interaction","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0080008 // CUL4-RING ubiquitin ligase complex // inferred from direct assay","0030374 // ligand-dependent nuclear receptor transcription coactivator activity // inferred from direct assay","chr1:167906055-168045072 (+) // 94.93 // q24.2"]
["11718044_s_at",-0.22719955,0.11220837,-0.031883717,-0.029353619,0.029353619,0.064762115,0.81303704,0.5276327,-1.0501138,-0.07054567,1.0501138,"down","RAB11B",9230.0,"0006184 // GTP catabolic process // inferred from direct assay /// 0006184 // GTP catabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from direct assay /// 0003924 // GTPase activity // traceable author statement /// 0005525 // GTP binding // inferred from direct assay /// 0005525 // GTP binding // inferred from electronic annotation /// 0019003 // GDP binding // inferred from direct assay","chr19:8455081-8469318 (+) // 92.83 // p13.2"]
["11747683_a_at",-0.08937454,0.03111124,-0.03111124,-0.16053772,0.044686794,0.21595764,0.8520523,0.60984176,-1.0447519,-0.06316036,1.0447519,"down","ARHGAP27",201176.0,"0006897 // endocytosis // inferred from electronic annotation /// 0006898 // receptor-mediated endocytosis // inferred from sequence or structural similarity /// 0007165 // signal transduction // inferred from electronic annotation /// 0032855 // positive regulation of Rac GTPase activity // inferred from sequence or structural similarity /// 0043089 // positive regulation of Cdc42 GTPase activity // inferred from sequence or structural similarity /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation","0005622 // intracellular // inferred from sequence or structural similarity /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from sequence or structural similarity /// 0030675 // Rac GTPase activator activity // inferred from sequence or structural similarity","chr17:43474753-43487765 (-) // 77.9 // q21.31"]
["11720562_a_at",-0.003189087,-0.017790794,0.003189087,0.097682,-0.030950546,0.074243546,0.63632,0.25676852,-1.0373638,-0.052921884,1.0373638,"down","PLXNA2",5362.0,"0001756 // somitogenesis // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0021915 // neural tube development // inferred from electronic annotation /// 0021935 // cerebellar granule cell precursor tangential migration // inferred from electronic annotation /// 0030334 // regulation of cell migration // inferred from sequence or structural similarity /// 0030334 // regulation of cell migration // inferred from electronic annotation /// 0051642 // centrosome localization // inferred from electronic annotation /// 0060037 // pharyngeal system development // inferred from electronic annotation /// 0060174 // limb bud formation // inferred from electronic annotation /// 0071526 // semaphorin-plexin signaling pathway // inferred from sequence or structural similarity /// 0071526 // semaphorin-plexin signaling pathway // inferred from electronic annotation","0002116 // semaphorin receptor complex // traceable author statement /// 0005622 // intracellular // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from sequence or structural similarity /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0017154 // semaphorin receptor activity // inferred from sequence or structural similarity /// 0017154 // semaphorin receptor activity // inferred from electronic annotation","chr1:208195589-208417729 (-) // 96.97 // q32.2"]
["11747424_x_at",0.011036873,0.0428133,0.01758194,-0.011036873,-0.018179893,-0.021416664,0.23818144,0.016071642,1.0286046,0.04068855,1.0286046,"up","RNPS1",10921.0,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // inferred from direct assay /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // inferred from mutant phenotype /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // inferred from electronic annotation /// 0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0000398 // nuclear mRNA splicing, via spliceosome // non-traceable author statement /// 0006351 // transcription, DNA-dependent // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0031124 // mRNA 3'-end processing // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // non-traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016607 // nuclear speck // inferred from electronic annotation /// 0035145 // exon-exon junction complex // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0003729 // mRNA binding // non-traceable author statement /// 0003730 // mRNA 3'-UTR binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction","chr16:2303474-2318398 (-) // 92.25 // p13.3"]
["11727546_at",-0.030184269,0.030184746,-0.34165812,-0.11288881,0.06687784,0.080768585,0.7340201,0.3924319,-1.0908644,-0.1254718,1.0908644,"down","PANK3",79646.0,"0015937 // coenzyme A biosynthetic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004594 // pantothenate kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr5:167982377-168006610 (-) // 88.16 // q34"]
["11737775_a_at",0.01897049,0.015174866,0.02400875,-0.034650803,-0.018053055,-0.015174866,0.1310933,0.0030998474,1.0295479,0.042010993,1.0295479,"up","NOP2",4839.0,"0006364 // rRNA processing // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0032259 // methylation // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005730 // nucleolus // traceable author statement","0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008757 // S-adenosylmethionine-dependent methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr12:6666036-6677480 (-) // 98.7 // p13.31"]
["11719812_a_at",-0.20195818,0.015676975,-0.12475395,-0.015676975,0.11791992,0.17173624,0.4293222,0.082551755,-1.144728,-0.19500476,1.144728,"down","SLC48A1",55652.0,"0006810 // transport // inferred from electronic annotation","0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr12:48166965-48176768 (+) // 82.81 // q13.11"]
["11749451_a_at",-4.6014786E-4,0.0016708374,0.09262514,-0.021516323,4.6014786E-4,-0.0698719,0.55639935,0.17179736,1.0436138,0.061587915,1.0436138,"up","DERA",51071.0,"0009264 // deoxyribonucleotide catabolic process // inferred from electronic annotation /// 0046121 // deoxyribonucleoside catabolic process // inferred from direct assay /// 0046386 // deoxyribose phosphate catabolic process // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004139 // deoxyribose-phosphate aldolase activity // inferred from direct assay /// 0004139 // deoxyribose-phosphate aldolase activity // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation","chr12:16064296-16186270 (+) // 99.93 // p12.3"]
["11758526_s_at",-0.0274086,-0.07978892,0.0274086,-0.038305283,0.14501071,0.06254935,0.62953895,0.24763086,-1.059229,-0.08301455,1.059229,"down","RELN",5649.0,"0000904 // cell morphogenesis involved in differentiation // inferred from sequence or structural similarity /// 0000904 // cell morphogenesis involved in differentiation // inferred from electronic annotation /// 0001764 // neuron migration // inferred from sequence or structural similarity /// 0001764 // neuron migration // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007411 // axon guidance // inferred from sequence or structural similarity /// 0007411 // axon guidance // inferred from electronic annotation /// 0007417 // central nervous system development // inferred from sequence or structural similarity /// 0007417 // central nervous system development // inferred from electronic annotation /// 0007420 // brain development // inferred from sequence or structural similarity /// 0007420 // brain development // inferred from electronic annotation /// 0010001 // glial cell differentiation // inferred from sequence or structural similarity /// 0010001 // glial cell differentiation // inferred from electronic annotation /// 0010976 // positive regulation of neuron projection development // inferred from sequence or structural similarity /// 0014068 // positive regulation of phosphatidylinositol 3-kinase cascade // inferred from electronic annotation /// 0016358 // dendrite development // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from sequence or structural similarity /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0021511 // spinal cord patterning // inferred from sequence or structural similarity /// 0021511 // spinal cord patterning // inferred from electronic annotation /// 0021517 // ventral spinal cord development // inferred from electronic annotation /// 0021766 // hippocampus development // inferred from sequence or structural similarity /// 0021800 // cerebral cortex tangential migration // inferred from sequence or structural similarity /// 0021800 // cerebral cortex tangential migration // inferred from electronic annotation /// 0021987 // cerebral cortex development // inferred from electronic annotation /// 0032008 // positive regulation of TOR signaling cascade // inferred from electronic annotation /// 0032793 // positive regulation of CREB transcription factor activity // inferred from sequence or structural similarity /// 0038026 // reelin-mediated signaling pathway // inferred from sequence or structural similarity /// 0038026 // reelin-mediated signaling pathway // inferred from electronic annotation /// 0045860 // positive regulation of protein kinase activity // inferred from sequence or structural similarity /// 0045860 // positive regulation of protein kinase activity // inferred from electronic annotation /// 0048265 // response to pain // inferred from sequence or structural similarity /// 0048265 // response to pain // inferred from electronic annotation /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from sequence or structural similarity /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0050795 // regulation of behavior // inferred from sequence or structural similarity /// 0050804 // regulation of synaptic transmission // inferred from sequence or structural similarity /// 0051057 // positive regulation of small GTPase mediated signal transduction // inferred from sequence or structural similarity /// 0051057 // positive regulation of small GTPase mediated signal transduction // inferred from electronic annotation /// 0051968 // positive regulation of synaptic transmission, glutamatergic // inferred from sequence or structural similarity /// 0061003 // positive regulation of dendritic spine morphogenesis // inferred from sequence or structural similarity /// 0061098 // positive regulation of protein tyrosine kinase activity // inferred from sequence or structural similarity /// 0090129 // positive regulation of synapse maturation // inferred from sequence or structural similarity /// 1900273 // positive regulation of long-term synaptic potentiation // inferred from sequence or structural similarity /// 2000310 // regulation of N-methyl-D-aspartate selective glutamate receptor activity // inferred from sequence or structural similarity /// 2000463 // positive regulation of excitatory postsynaptic membrane potential // inferred from sequence or structural similarity /// 2000969 // positive regulation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor activity // inferred from sequence or structural similarity","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005615 // extracellular space // inferred from sequence or structural similarity /// 0005615 // extracellular space // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0030425 // dendrite // inferred from sequence or structural similarity /// 0030425 // dendrite // inferred from electronic annotation","0004712 // protein serine/threonine/tyrosine kinase activity // inferred from sequence or structural similarity /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070325 // lipoprotein particle receptor binding // inferred from sequence or structural similarity /// 0070325 // lipoprotein particle receptor binding // inferred from electronic annotation /// 0070326 // very-low-density lipoprotein particle receptor binding // inferred from sequence or structural similarity /// 0070326 // very-low-density lipoprotein particle receptor binding // inferred from electronic annotation","chr7:103112237-103112667 (-) // 96.62 // q22.1"]
["11741893_at",-0.13060474,0.014369965,-0.050209045,0.14312458,0.1513815,-0.014369965,0.44929114,0.09483827,-1.108693,-0.14885993,1.108693,"down","DPH3P1",1.00132911E8,"","","0046872 // metal ion binding // inferred from electronic annotation","chr20:61476489-61477543 (+) // 73.06 // q13.33"]
["11740894_x_at",0.021682262,-0.07537961,-0.1668148,0.03742504,0.041659832,-0.0216825,0.5723513,0.18627632,-1.0663183,-0.09263811,1.0663183,"down","SPANXN2",494119.0,"","","","chrX:142795054-142804516 (-) // 99.21 // q27.3"]
["11734593_a_at",-0.036509514,0.0053801537,0.0,0.0,-0.06669307,0.15412068,0.8400933,0.58538663,-1.0277711,-0.039519012,1.0277711,"down","SLC10A7",84068.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0015293 // symporter activity // inferred from electronic annotation","chr4:147362816-147443123 (-) // 97.68 // q31.22"]
["11729522_at",0.009668827,-0.00966835,0.07891703,-0.05042076,-0.07718134,0.028778553,0.6136285,0.2280037,1.0419219,0.059247077,1.0419219,"up","CA5B",11238.0,"0006730 // one-carbon metabolic process // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005739 // mitochondrion // traceable author statement","0004089 // carbonate dehydratase activity // inferred from electronic annotation /// 0004089 // carbonate dehydratase activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chrX:15756392-15805747 (+) // 53.28 // p22.2"]
["11719138_at",-0.00894165,-0.0281353,0.0647068,0.022378922,0.00894165,-0.033618927,0.9251476,0.77714646,1.0069388,0.009976023,1.0069388,"up","C20orf72",92667.0,"","0005739 // mitochondrion // inferred from electronic annotation","","chr20:17949533-17971765 (+) // 95.97 // p11.23"]
["11730846_x_at",-0.060973644,0.060973167,-0.06143856,0.10429859,-0.16225576,0.12287521,0.8900359,0.69725263,-1.029625,-0.04211907,1.029625,"down","PIK3R3",8503.0,"0007596 // blood coagulation // traceable author statement /// 0008286 // insulin receptor signaling pathway // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0031295 // T cell costimulation // traceable author statement /// 0036092 // phosphatidylinositol-3-phosphate biosynthetic process // traceable author statement /// 0043551 // regulation of phosphatidylinositol 3-kinase activity // inferred from electronic annotation","0005829 // cytosol // traceable author statement /// 0005942 // phosphatidylinositol 3-kinase complex // inferred from electronic annotation","0016301 // kinase activity // inferred from electronic annotation /// 0016303 // 1-phosphatidylinositol-3-kinase activity // traceable author statement /// 0035014 // phosphatidylinositol 3-kinase regulator activity // inferred from electronic annotation /// 0046935 // 1-phosphatidylinositol-3-kinase regulator activity // inferred from electronic annotation","chr1:46505811-46598380 (-) // 99.53 // p34.1"]
["11724071_at",0.03904724,-0.04185772,0.07578564,0.0029478073,-0.019198418,-0.0029478073,0.760783,0.43410188,1.021525,0.030724548,1.021525,"up","PHF10",55274.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0071564 // npBAF complex // inferred from sequence or structural similarity /// 0071564 // npBAF complex // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:170103997-170124151 (-) // 89.68 // q27"]
["11718409_a_at",-0.01949215,-0.1594038,-0.080417156,0.019492626,0.04011917,0.104925156,0.33905825,0.042212903,-1.1028857,-0.1412833,1.1028857,"down","STXBP2",6813.0,"0001909 // leukocyte mediated cytotoxicity // inferred from mutant phenotype /// 0006810 // transport // inferred from electronic annotation /// 0006887 // exocytosis // inferred from electronic annotation /// 0006904 // vesicle docking involved in exocytosis // inferred from electronic annotation /// 0010447 // response to acidity // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0043304 // regulation of mast cell degranulation // inferred from sequence or structural similarity /// 0043304 // regulation of mast cell degranulation // inferred from electronic annotation /// 0043312 // neutrophil degranulation // inferred from expression pattern","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030141 // secretory granule // inferred from electronic annotation /// 0031201 // SNARE complex // inferred from direct assay /// 0042581 // specific granule // inferred from direct assay /// 0042582 // azurophil granule // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation /// 0044194 // cytolytic granule // inferred from direct assay /// 0070820 // tertiary granule // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0017075 // syntaxin-1 binding // inferred from electronic annotation /// 0030348 // syntaxin-3 binding // inferred from physical interaction /// 0030348 // syntaxin-3 binding // inferred from electronic annotation","chr19:7701987-7712759 (+) // 98.27 // p13.2"]
["11723021_a_at",0.006234169,-0.007715702,-0.006234646,0.02578783,0.036623,-0.024607658,0.78724647,0.47736827,-1.0105727,-0.015173072,1.0105727,"down","BCKDHB",594.0,"0007584 // response to nutrient // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009083 // branched chain family amino acid catabolic process // inferred from mutant phenotype /// 0009083 // branched chain family amino acid catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation /// 0051591 // response to cAMP // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005739 // mitochondrion // inferred from mutant phenotype /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement /// 0005759 // mitochondrial matrix // inferred from electronic annotation /// 0005947 // mitochondrial alpha-ketoglutarate dehydrogenase complex // inferred from mutant phenotype","0003824 // catalytic activity // inferred from electronic annotation /// 0003826 // alpha-ketoacid dehydrogenase activity // inferred from electronic annotation /// 0003863 // 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity // inferred from electronic annotation /// 0003863 // 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016831 // carboxy-lyase activity // traceable author statement /// 0032403 // protein complex binding // inferred from electronic annotation","chr6:80816326-81055987 (+) // 82.63 // q14.1"]
["11740962_a_at",-0.02789259,-0.016433716,-0.12964201,0.016433716,0.08262205,0.051318645,0.3773291,0.056765515,-1.0778185,-0.10811427,1.0778185,"down","UBA5",79876.0,"0008152 // metabolic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0071569 // protein ufmylation // inferred from direct assay /// 0071569 // protein ufmylation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016235 // aggresome // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016616 // oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0048037 // cofactor binding // inferred from electronic annotation /// 0071566 // UFM1 activating enzyme activity // inferred from direct assay","chr3:132373289-132396943 (+) // 99.51 // q22.1"]
["11738837_x_at",0.0050201416,-0.0050196648,0.015180588,-0.088810444,0.34638977,-0.028077602,0.8599322,0.62764734,-1.0507652,-0.071440265,1.0507652,"down","NPAS1",4861.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007417 // central nervous system development // traceable author statement /// 0007610 // behavior // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0004871 // signal transducer activity // inferred from electronic annotation","chr19:47524153-47549016 (+) // 96.61 // q13.32"]
["11731242_a_at",-0.12819123,-0.08117628,-0.032172203,0.27101684,0.032172203,0.18678379,0.30483323,0.03164015,-1.1841383,-0.24383758,1.1841383,"down","LGSN",51557.0,"0006542 // glutamine biosynthetic process // inferred from electronic annotation /// 0006807 // nitrogen compound metabolic process // inferred from electronic annotation","","0003824 // catalytic activity // inferred from electronic annotation /// 0004356 // glutamate-ammonia ligase activity // inferred from electronic annotation","chr6:63985539-64029882 (-) // 83.2 // q12"]
["11722987_a_at",0.08609533,-0.022185326,0.022185326,-0.0481081,-0.031762123,0.11351347,0.9281503,0.7859824,1.0121927,0.017484011,1.0121927,"up","ZMYND15",84225.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0007286 // spermatid development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0042826 // histone deacetylase binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:4643139-4649408 (+) // 93.48 // p13.2"]
["11727733_a_at",-0.049278736,-0.24993777,0.060082674,-0.090056896,0.090877056,0.049278736,0.7484818,0.4144838,-1.0691105,-0.09641099,1.0691105,"down","CCDC40",55036.0,"0060285 // ciliary cell motility // inferred from mutant phenotype /// 0060285 // ciliary cell motility // inferred from electronic annotation /// 0060286 // flagellar cell motility // inferred from mutant phenotype /// 0060286 // flagellar cell motility // inferred from electronic annotation /// 0060287 // epithelial cilium movement involved in determination of left/right asymmetry // inferred from mutant phenotype /// 0060287 // epithelial cilium movement involved in determination of left/right asymmetry // inferred from electronic annotation /// 0070286 // axonemal dynein complex assembly // inferred from mutant phenotype","0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005929 // cilium // inferred from sequence or structural similarity /// 0005929 // cilium // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","","chr17:78011918-78074412 (+) // 96.16 // q25.3"]
["11730194_a_at",-0.03474903,0.03474903,-0.29563308,-0.0399518,0.07727051,0.079916,0.6483252,0.27176276,-1.1000907,-0.13762254,1.1000907,"down","SEC14L2",23541.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0043085 // positive regulation of catalytic activity // inferred from electronic annotation /// 0045540 // regulation of cholesterol biosynthetic process // non-traceable author statement /// 0045542 // positive regulation of cholesterol biosynthetic process // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // non-traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation /// 0005543 // phospholipid binding // non-traceable author statement /// 0008047 // enzyme activator activity // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation /// 0008431 // vitamin E binding // non-traceable author statement /// 0016765 // transferase activity, transferring alkyl or aryl (other than methyl) groups // inferred from electronic annotation","chr22:30792845-30821291 (+) // 89.61 // q12.2"]
["11736005_x_at",0.1623981,0.023825884,-0.16747046,0.020439863,-0.020439863,-0.2931211,0.7933666,0.49088585,1.074718,0.10395815,1.074718,"up","PRH1 /// PRH2","5554 /// 5555","","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement","0005515 // protein binding // inferred from physical interaction","chr12:11081834-11087444 (+) // 96.93 // p13.2"]
["11744286_s_at",-0.03634882,-0.07717323,0.06198263,-0.028686047,0.028686047,0.08934021,0.75891376,0.42996663,-1.0330857,-0.046959944,1.0330857,"down","CBS",875.0,"0000096 // sulfur amino acid metabolic process // traceable author statement /// 0001958 // endochondral ossification // inferred from electronic annotation /// 0001974 // blood vessel remodeling // inferred from electronic annotation /// 0006535 // cysteine biosynthetic process from serine // inferred from electronic annotation /// 0006563 // L-serine metabolic process // inferred from direct assay /// 0006565 // L-serine catabolic process // inferred from direct assay /// 0006801 // superoxide metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008652 // cellular amino acid biosynthetic process // inferred from electronic annotation /// 0019343 // cysteine biosynthetic process via cystathionine // inferred from electronic annotation /// 0019344 // cysteine biosynthetic process // inferred from electronic annotation /// 0019346 // transsulfuration // traceable author statement /// 0019346 // transsulfuration // inferred from electronic annotation /// 0019448 // L-cysteine catabolic process // inferred from direct assay /// 0021587 // cerebellum morphogenesis // inferred from electronic annotation /// 0030823 // regulation of cGMP metabolic process // inferred from electronic annotation /// 0031667 // response to nutrient levels // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0043418 // homocysteine catabolic process // inferred from direct assay /// 0043506 // regulation of JUN kinase activity // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0050667 // homocysteine metabolic process // inferred from direct assay /// 0050667 // homocysteine metabolic process // inferred from electronic annotation /// 0050880 // regulation of blood vessel size // inferred from electronic annotation /// 0051593 // response to folic acid // inferred from electronic annotation /// 0060135 // maternal process involved in female pregnancy // inferred from electronic annotation /// 0060351 // cartilage development involved in endochondral bone morphogenesis // inferred from electronic annotation /// 0070814 // hydrogen sulfide biosynthetic process // inferred from direct assay /// 0070814 // hydrogen sulfide biosynthetic process // inferred from sequence or structural similarity","0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0003824 // catalytic activity // inferred from electronic annotation /// 0004122 // cystathionine beta-synthase activity // inferred from direct assay /// 0004122 // cystathionine beta-synthase activity // traceable author statement /// 0004122 // cystathionine beta-synthase activity // inferred from electronic annotation /// 0004124 // cysteine synthase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016740 // transferase activity // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0020037 // heme binding // inferred from direct assay /// 0020037 // heme binding // inferred from mutant phenotype /// 0030170 // pyridoxal phosphate binding // inferred from direct assay /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0072341 // modified amino acid binding // inferred from direct assay","chr21:44473300-44496055 (-) // 86.95 // q22.3"]
["11744386_a_at",0.036187172,-0.019939423,-0.022291183,-0.018671036,0.018671036,0.040010452,0.8383922,0.5821535,-1.0106975,-0.015351242,1.0106975,"down","RHOT2",89941.0,"0006184 // GTP catabolic process // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from mutant phenotype /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0019725 // cellular homeostasis // inferred from mutant phenotype /// 0019725 // cellular homeostasis // inferred from electronic annotation /// 0047497 // mitochondrion transport along microtubule // inferred from mutant phenotype /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031307 // integral to mitochondrial outer membrane // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr16:718108-724171 (+) // 91.88 // p13.3"]
["11715629_a_at",-0.011304855,-0.044454575,0.07616043,-0.02291298,0.19425201,0.011304855,0.80772007,0.5181564,-1.0381975,-0.05408094,1.0381975,"down","LAPTM4A",9741.0,"0006810 // transport // inferred from electronic annotation","0005794 // Golgi apparatus // inferred from direct assay /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr2:20232411-20251789 (-) // 97.78 // p24.1"]
["11744494_x_at",0.017365456,-0.04919529,0.045289993,-0.025112152,0.0043144226,-0.0043144226,0.88519406,0.6839981,1.0089519,0.012857402,1.0089519,"up","JTB",10899.0,"0006915 // apoptotic process // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from mutant phenotype /// 0007067 // mitosis // inferred from electronic annotation /// 0033205 // cell cycle cytokinesis // inferred from mutant phenotype /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0045860 // positive regulation of protein kinase activity // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // inferred from direct assay /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030496 // midbody // inferred from direct assay","0019901 // protein kinase binding // inferred from direct assay","chr1:153946741-153950106 (-) // 89.02 // q21.3"]
["11731641_s_at",-0.09633541,-0.10615158,-0.017877102,0.017877579,0.10335684,0.11799955,0.26548246,0.021638472,-1.1120328,-0.1531993,1.1120328,"down","TRAPPC10",7109.0,"0006810 // transport // inferred from electronic annotation /// 0006814 // sodium ion transport // traceable author statement /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0071436 // sodium ion export // traceable author statement","0005794 // Golgi apparatus // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0015081 // sodium ion transmembrane transporter activity // traceable author statement","chr21:45432205-45526434 (+) // 98.33 // q22.3"]
["11724294_at",-0.013431549,0.035182953,-0.26861954,0.013431549,-0.01989317,0.032987118,0.7350698,0.3938689,-1.0652051,-0.09113123,1.0652051,"down","HPCA",3208.0,"0048839 // inner ear development // inferred from electronic annotation","","0003779 // actin binding // inferred from direct assay /// 0005509 // calcium ion binding // non-traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation","chr1:33341179-33360247 (+) // 84.77 // p35.1"]
["11721515_a_at",-0.011248589,-0.051760674,0.008088112,-0.008088112,0.091056824,0.057631493,0.50159705,0.12810299,-1.046211,-0.06517385,1.046211,"down","TM9SF1",10548.0,"0006886 // intracellular protein transport // inferred from electronic annotation /// 0006914 // autophagy // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0000421 // autophagic vacuole membrane // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0008565 // protein transporter activity // inferred from electronic annotation","chr14:24658353-24664882 (-) // 97.17 // q12"]
["11764238_at",-0.12231541,0.009929419,-0.009929657,0.15500593,-0.09709382,0.08879113,0.71060133,0.35575694,-1.064129,-0.08967304,1.064129,"down","","","","","","chr21:46224627-46225150 (-) // 88.19 // q22.3"]
["11745400_a_at",-0.06411362,-0.021269321,-0.18825006,0.021269321,0.10486555,0.17855215,0.35133916,0.04634021,-1.1429588,-0.19277334,1.1429588,"down","ARSE",415.0,"0001501 // skeletal system development // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation","0005794 // Golgi apparatus // inferred from electronic annotation /// 0005795 // Golgi stack // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004065 // arylsulfatase activity // traceable author statement /// 0008484 // sulfuric ester hydrolase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chrX:2852698-2886286 (-) // 92.26 // p22.33"]
["11749571_a_at",0.06915665,0.013576984,0.11718273,-0.02173376,-0.06673241,-0.013576984,0.33905825,0.042239368,1.0722588,0.100653194,1.0722588,"up","ZNF692",55657.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:249144480-249153284 (-) // 96.55 // q44"]
["11763551_x_at",0.034448624,0.056118965,-0.12099743,-0.12691402,0.086336136,-0.034448624,0.95684665,0.8668886,1.0103573,0.014865518,1.0103573,"up","IGLJ3",28831.0,"","","","chr22:23063147-23243212 (+) // 94.46 // q11.22"]
["11715738_s_at",0.017447472,-0.017447472,0.04397106,-0.032839775,0.040177345,-0.028075218,0.80060816,0.50573087,1.0150632,0.021569507,1.0150632,"up","SNX3",8724.0,"0006810 // transport // inferred from electronic annotation /// 0006897 // endocytosis // traceable author statement /// 0007154 // cell communication // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0005769 // early endosome // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008289 // lipid binding // inferred from electronic annotation /// 0019903 // protein phosphatase binding // inferred from physical interaction /// 0032266 // phosphatidylinositol-3-phosphate binding // inferred from direct assay /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation","chr6:108532420-108582478 (-) // 90.16 // q21"]
["11763749_x_at",0.019024849,0.11309624,-0.042430878,0.027064323,-0.019024849,-0.17906427,0.6879033,0.3227902,1.0620892,0.08690494,1.0620892,"up","MLPH",79083.0,"0006605 // protein targeting // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0030318 // melanocyte differentiation // inferred from electronic annotation /// 0032400 // melanosome localization // inferred from electronic annotation /// 0043473 // pigmentation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0017022 // myosin binding // inferred from electronic annotation /// 0017137 // Rab GTPase binding // inferred from electronic annotation /// 0031489 // myosin V binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051010 // microtubule plus-end binding // inferred from electronic annotation","chr2:238395893-238462281 (+) // 97.24 // q37.3"]
["11733827_a_at",0.00385952,-0.022646904,-0.06223774,0.0033130646,-0.0033130646,0.012716293,0.5747986,0.18895797,-1.0218952,-0.031247206,1.0218952,"down","C19orf48",84798.0,"","","","chr19:51300961-51308186 (-) // 98.45 // q13.33"]
["11726729_at",-0.059655666,-0.1189518,-0.010426044,0.13762903,0.022084236,0.010425568,0.42543533,0.079949215,-1.0865271,-0.11972417,1.0865271,"down","KDM4A",9682.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0016577 // histone demethylation // inferred from direct assay /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0070544 // histone H3-K36 demethylation // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016702 // oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051864 // histone demethylase activity (H3-K36 specific) // inferred from direct assay","chr1:44115796-44171189 (+) // 96.97 // p34.1"]
["11760834_x_at",0.025090218,-0.014576912,0.014576435,-0.022668362,-0.058687687,0.055267334,0.87373126,0.65735507,1.011895,0.017059512,1.011895,"up","MED6",10001.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0016592 // mediator complex // inferred from direct assay /// 0016592 // mediator complex // inferred from mutant phenotype /// 0016592 // mediator complex // inferred from electronic annotation /// 0016592 // mediator complex // traceable author statement","0001104 // RNA polymerase II transcription cofactor activity // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0008134 // transcription factor binding // inferred from physical interaction","chr14:71059225-71067378 (-) // 81.99 // q24.2"]
["11718282_s_at",-0.045240402,-0.05267334,0.021354675,0.018863678,0.014451027,-0.014451027,0.6585134,0.28432965,-1.0222921,-0.03180753,1.0222921,"down","NDUFV2",4729.0,"0006120 // mitochondrial electron transport, NADH to ubiquinone // inferred from mutant phenotype /// 0006120 // mitochondrial electron transport, NADH to ubiquinone // non-traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007399 // nervous system development // inferred from mutant phenotype /// 0022900 // electron transport chain // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0048738 // cardiac muscle tissue development // inferred from mutant phenotype /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005747 // mitochondrial respiratory chain complex I // inferred from direct assay /// 0005747 // mitochondrial respiratory chain complex I // inferred from mutant phenotype /// 0005747 // mitochondrial respiratory chain complex I // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0070469 // respiratory chain // inferred from electronic annotation","0003954 // NADH dehydrogenase activity // inferred from electronic annotation /// 0008137 // NADH dehydrogenase (ubiquinone) activity // inferred from mutant phenotype /// 0008137 // NADH dehydrogenase (ubiquinone) activity // non-traceable author statement /// 0008137 // NADH dehydrogenase (ubiquinone) activity // inferred from electronic annotation /// 0009055 // electron carrier activity // non-traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051287 // NAD binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation /// 0051537 // 2 iron, 2 sulfur cluster binding // inferred from electronic annotation","chr18:9102627-9134343 (+) // 90.72 // p11.22"]
["11715981_a_at",0.054237843,-0.08370352,0.024837494,-0.008660793,-0.13025856,0.008660793,0.8129641,0.52742213,1.0294522,0.04187685,1.0294522,"up","VPS11",55823.0,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0030139 // endocytic vesicle // inferred from direct assay /// 0030897 // HOPS complex // inferred from direct assay /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031902 // late endosome membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:118938402-118952677 (+) // 97.4 // q23.3"]
["11721072_a_at",0.047369003,0.00623703,0.13417053,-0.06707764,-0.042408943,-0.00623703,0.4112693,0.072021045,1.0726405,0.10116668,1.0726405,"up","SF3A1",10291.0,"0000389 // nuclear mRNA 3'-splice site recognition // traceable author statement /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred from direct assay /// 0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0006396 // RNA processing // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from mutant phenotype /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from direct assay /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005684 // U2-type spliceosomal complex // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay","0003723 // RNA binding // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr22:30727934-30752928 (-) // 93.79 // q12.2"]
["11754052_a_at",0.09353542,0.046949387,0.002919197,-0.002919197,-0.03438282,-0.011903763,0.4287477,0.08196845,1.0455074,0.064203314,1.0455074,"up","NUP85",79902.0,"0000087 // M phase of mitotic cell cycle // traceable author statement /// 0000236 // mitotic prometaphase // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006935 // chemotaxis // inferred from electronic annotation /// 0008645 // hexose transport // traceable author statement /// 0010827 // regulation of glucose transport // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0015758 // glucose transport // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0030032 // lamellipodium assembly // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0048246 // macrophage chemotaxis // inferred from electronic annotation /// 0051028 // mRNA transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from direct assay /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // traceable author statement /// 0005643 // nuclear pore // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031080 // nuclear pore outer ring // inferred from direct assay /// 0031080 // nuclear pore outer ring // non-traceable author statement /// 0031965 // nuclear membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr17:73201801-73231852 (+) // 96.06 // q25.1"]
["11742659_at",0.13554907,0.075737,-0.12197161,0.026080608,-0.026080608,-0.10476923,0.7958352,0.49659145,1.0458635,0.06469458,1.0458635,"up","PRHOXNB",646625.0,"0006144 // purine base metabolic process // inferred from electronic annotation /// 0019428 // allantoin biosynthetic process // inferred from electronic annotation /// 0019628 // urate catabolic process // inferred from electronic annotation","0005777 // peroxisome // inferred from electronic annotation","0016829 // lyase activity // inferred from electronic annotation /// 0016831 // carboxy-lyase activity // inferred from sequence or structural similarity /// 0016831 // carboxy-lyase activity // inferred from electronic annotation","chr13:28552242-28562774 (-) // 100.0 // q12.2"]
["11719040_s_at",-0.0029449463,-0.12114334,-0.09446049,0.13513231,0.0029449463,0.021936417,0.4287477,0.08201719,-1.0914057,-0.12618755,1.0914057,"down","CYGB",114757.0,"0006810 // transport // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from sequence or structural similarity /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0015671 // oxygen transport // non-traceable author statement /// 0015671 // oxygen transport // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation","0004601 // peroxidase activity // inferred from sequence or structural similarity /// 0004601 // peroxidase activity // inferred from electronic annotation /// 0005344 // oxygen transporter activity // non-traceable author statement /// 0005344 // oxygen transporter activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from electronic annotation /// 0019825 // oxygen binding // inferred from electronic annotation /// 0020037 // heme binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:74523437-74533987 (-) // 87.52 // q25.1"]
["11735053_s_at",-0.020814896,0.12015104,-0.10358572,0.06713438,-0.099419594,0.020815134,0.99333394,0.97799844,1.0016696,0.0024067804,1.0016696,"up","AKAP6",9472.0,"0006605 // protein targeting // non-traceable author statement /// 0010738 // regulation of protein kinase A signaling cascade // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0032514 // positive regulation of protein phosphatase type 2B activity // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from direct assay /// 0005640 // nuclear outer membrane // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016529 // sarcoplasmic reticulum // inferred from direct assay /// 0016529 // sarcoplasmic reticulum // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation /// 0034704 // calcium channel complex // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0016301 // kinase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from electronic annotation /// 0032947 // protein complex scaffold // inferred from electronic annotation /// 0034237 // protein kinase A regulatory subunit binding // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from electronic annotation /// 0051018 // protein kinase A binding // non-traceable author statement /// 0051018 // protein kinase A binding // traceable author statement","chr14:32798478-33302267 (+) // 94.16 // q12"]
["11723908_at",0.100544214,-0.017232656,-0.12055969,0.0,0.047896862,0.0,0.887342,0.68862194,-1.0198674,-0.028381618,1.0198674,"down","KCNMA1",3778.0,"0001666 // response to hypoxia // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006813 // potassium ion transport // inferred from direct assay /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0006970 // response to osmotic stress // inferred from direct assay /// 0007268 // synaptic transmission // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0030007 // cellular potassium ion homeostasis // inferred from direct assay /// 0034465 // response to carbon monoxide // inferred from direct assay /// 0034465 // response to carbon monoxide // inferred from mutant phenotype /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0042391 // regulation of membrane potential // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0045794 // negative regulation of cell volume // inferred from direct assay /// 0051592 // response to calcium ion // inferred from direct assay /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0060073 // micturition // inferred from direct assay /// 0060083 // smooth muscle contraction involved in micturition // inferred from direct assay /// 0071805 // potassium ion transmembrane transport // not recorded /// 0071805 // potassium ion transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005901 // caveola // inferred from direct assay /// 0008076 // voltage-gated potassium channel complex // inferred from direct assay /// 0008076 // voltage-gated potassium channel complex // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003779 // actin binding // inferred from direct assay /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005249 // voltage-gated potassium channel activity // inferred from direct assay /// 0005249 // voltage-gated potassium channel activity // inferred from electronic annotation /// 0005267 // potassium channel activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0015269 // calcium-activated potassium channel activity // inferred from direct assay /// 0015269 // calcium-activated potassium channel activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0060072 // large conductance calcium-activated potassium channel activity // inferred from direct assay /// 0060072 // large conductance calcium-activated potassium channel activity // inferred from mutant phenotype /// 0060072 // large conductance calcium-activated potassium channel activity // inferred from electronic annotation","chr10:78629363-79397577 (-) // 95.5 // q22.3"]
["11756406_x_at",0.101540565,0.10846233,0.058724403,-0.09432793,-0.058724403,-0.09999943,0.090462,0.0010036072,1.1281246,0.17392641,1.1281246,"up","ADM",133.0,"0001570 // vasculogenesis // inferred from direct assay /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001843 // neural tube closure // inferred from electronic annotation /// 0002026 // regulation of the force of heart contraction // inferred from electronic annotation /// 0002031 // G-protein coupled receptor internalization // inferred from direct assay /// 0006171 // cAMP biosynthetic process // inferred from direct assay /// 0006171 // cAMP biosynthetic process // traceable author statement /// 0006701 // progesterone biosynthetic process // traceable author statement /// 0006950 // response to stress // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007204 // elevation of cytosolic calcium ion concentration // inferred from electronic annotation /// 0007267 // cell-cell signaling // traceable author statement /// 0007507 // heart development // inferred from electronic annotation /// 0007565 // female pregnancy // inferred from electronic annotation /// 0007565 // female pregnancy // traceable author statement /// 0007568 // aging // inferred from electronic annotation /// 0008015 // blood circulation // traceable author statement /// 0008209 // androgen metabolic process // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0009409 // response to cold // inferred from electronic annotation /// 0009611 // response to wounding // inferred from electronic annotation /// 0009611 // response to wounding // traceable author statement /// 0010033 // response to organic substance // inferred from electronic annotation /// 0010460 // positive regulation of heart rate // inferred from electronic annotation /// 0019933 // cAMP-mediated signaling // inferred from electronic annotation /// 0030819 // positive regulation of cAMP biosynthetic process // inferred from direct assay /// 0031100 // organ regeneration // inferred from electronic annotation /// 0031102 // neuron projection regeneration // inferred from electronic annotation /// 0031623 // receptor internalization // inferred from direct assay /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0032868 // response to insulin stimulus // inferred from electronic annotation /// 0042475 // odontogenesis of dentin-containing tooth // inferred from electronic annotation /// 0042594 // response to starvation // inferred from electronic annotation /// 0043116 // negative regulation of vascular permeability // inferred from electronic annotation /// 0045766 // positive regulation of angiogenesis // inferred from electronic annotation /// 0045768 // positive regulation of anti-apoptosis // inferred from electronic annotation /// 0045906 // negative regulation of vasoconstriction // inferred from direct assay /// 0045909 // positive regulation of vasodilation // inferred from electronic annotation /// 0046879 // hormone secretion // inferred from electronic annotation /// 0048589 // developmental growth // inferred from electronic annotation /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation /// 0055074 // calcium ion homeostasis // inferred from electronic annotation /// 0060670 // branching involved in labyrinthine layer morphogenesis // inferred from electronic annotation /// 0060712 // spongiotrophoblast layer development // inferred from electronic annotation /// 0097084 // vascular smooth muscle cell development // inferred from electronic annotation /// 2001214 // positive regulation of vasculogenesis // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005625 // soluble fraction // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay","0005102 // receptor binding // traceable author statement /// 0005179 // hormone activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0031700 // adrenomedullin receptor binding // inferred from electronic annotation","chr11:10326630-10328947 (+) // 95.33 // p15.4"]
["11749814_s_at",0.04126358,0.017285347,0.18646717,-0.04479122,-0.017285347,-0.03535652,0.45773593,0.09964334,1.082337,0.1141498,1.082337,"up","NEK2",4751.0,"0000070 // mitotic sister chromatid segregation // inferred from electronic annotation /// 0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007059 // chromosome segregation // inferred from direct assay /// 0007059 // chromosome segregation // inferred from electronic annotation /// 0007067 // mitosis // traceable author statement /// 0007067 // mitosis // inferred from electronic annotation /// 0007088 // regulation of mitosis // traceable author statement /// 0007126 // meiosis // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0043392 // negative regulation of DNA binding // inferred from electronic annotation /// 0046602 // regulation of mitotic centrosome separation // traceable author statement /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from mutant phenotype /// 0051225 // spindle assembly // traceable author statement /// 0051299 // centrosome separation // inferred from direct assay /// 0051301 // cell division // inferred from electronic annotation /// 0051988 // regulation of attachment of spindle microtubules to kinetochore // inferred from mutant phenotype","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from direct assay /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0000794 // condensed nuclear chromosome // inferred from electronic annotation /// 0000922 // spindle pole // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005813 // centrosome // traceable author statement /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0030496 // midbody // inferred from electronic annotation /// 0043234 // protein complex // inferred from mutant phenotype","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019903 // protein phosphatase binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:211836480-211848933 (-) // 99.82 // q32.3"]
["11759479_s_at",-0.004303932,-0.026792526,0.004303932,0.004527092,0.010250092,-0.020972252,0.8629739,0.63398314,-1.0047704,-0.006865866,1.0047704,"down","PTP4A2",8073.0,"0006470 // protein dephosphorylation // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0004727 // prenylated protein tyrosine phosphatase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation","chr1:32372023-32403955 (-) // 88.6 // p35.2"]
["11725393_s_at",0.021113396,0.01664257,0.039683342,-0.0322237,-0.01664257,-0.05993843,0.21830897,0.012813176,1.0439708,0.062081393,1.0439708,"up","MAK16",84549.0,"","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation","","chr8:33342267-33358780 (+) // 93.41 // p12"]
["11738008_s_at",-0.012328148,-0.042699814,-0.019723892,0.047071457,0.052625656,0.012328148,0.23832183,0.016167961,-1.0440993,-0.06225897,1.0440993,"down","APP",351.0,"0000085 // G2 phase of mitotic cell cycle // inferred from sequence or structural similarity /// 0000085 // G2 phase of mitotic cell cycle // inferred from electronic annotation /// 0001967 // suckling behavior // inferred from electronic annotation /// 0002576 // platelet degranulation // traceable author statement /// 0006378 // mRNA polyadenylation // inferred from sequence or structural similarity /// 0006378 // mRNA polyadenylation // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from sequence or structural similarity /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from sequence or structural similarity /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0006878 // cellular copper ion homeostasis // inferred from sequence or structural similarity /// 0006878 // cellular copper ion homeostasis // inferred from electronic annotation /// 0006897 // endocytosis // inferred from sequence or structural similarity /// 0006897 // endocytosis // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007176 // regulation of epidermal growth factor-activated receptor activity // inferred from sequence or structural similarity /// 0007176 // regulation of epidermal growth factor-activated receptor activity // inferred from electronic annotation /// 0007219 // Notch signaling pathway // inferred from electronic annotation /// 0007409 // axonogenesis // inferred from sequence or structural similarity /// 0007409 // axonogenesis // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0007617 // mating behavior // inferred from sequence or structural similarity /// 0007617 // mating behavior // inferred from electronic annotation /// 0007626 // locomotory behavior // inferred from sequence or structural similarity /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0008088 // axon cargo transport // inferred from sequence or structural similarity /// 0008088 // axon cargo transport // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0008344 // adult locomotory behavior // inferred from sequence or structural similarity /// 0008344 // adult locomotory behavior // inferred from electronic annotation /// 0008542 // visual learning // inferred from sequence or structural similarity /// 0008542 // visual learning // inferred from electronic annotation /// 0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0010952 // positive regulation of peptidase activity // inferred from electronic annotation /// 0016199 // axon midline choice point recognition // inferred from sequence or structural similarity /// 0016199 // axon midline choice point recognition // inferred from electronic annotation /// 0016322 // neuron remodeling // inferred from sequence or structural similarity /// 0016322 // neuron remodeling // inferred from electronic annotation /// 0016358 // dendrite development // inferred from sequence or structural similarity /// 0016358 // dendrite development // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0030198 // extracellular matrix organization // inferred from sequence or structural similarity /// 0030900 // forebrain development // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from sequence or structural similarity /// 0031175 // neuron projection development // inferred from electronic annotation /// 0035235 // ionotropic glutamate receptor signaling pathway // inferred from sequence or structural similarity /// 0035235 // ionotropic glutamate receptor signaling pathway // inferred from electronic annotation /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0040014 // regulation of multicellular organism growth // inferred from sequence or structural similarity /// 0040014 // regulation of multicellular organism growth // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0045931 // positive regulation of mitotic cell cycle // inferred from sequence or structural similarity /// 0045931 // positive regulation of mitotic cell cycle // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048669 // collateral sprouting in absence of injury // inferred from sequence or structural similarity /// 0048669 // collateral sprouting in absence of injury // inferred from electronic annotation /// 0050803 // regulation of synapse structure and activity // inferred from sequence or structural similarity /// 0050803 // regulation of synapse structure and activity // inferred from electronic annotation /// 0050885 // neuromuscular process controlling balance // inferred from electronic annotation /// 0051124 // synaptic growth at neuromuscular junction // inferred from electronic annotation /// 0051402 // neuron apoptotic process // inferred from mutant phenotype /// 0051563 // smooth endoplasmic reticulum calcium ion homeostasis // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from sequence or structural similarity /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005887 // integral to plasma membrane // traceable author statement /// 0005905 // coated pit // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from sequence or structural similarity /// 0016021 // integral to membrane // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0030424 // axon // inferred from sequence or structural similarity /// 0030424 // axon // inferred from electronic annotation /// 0031093 // platelet alpha granule lumen // traceable author statement /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031594 // neuromuscular junction // inferred from electronic annotation /// 0035253 // ciliary rootlet // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from direct assay /// 0043198 // dendritic shaft // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0045177 // apical part of cell // inferred from electronic annotation /// 0045202 // synapse // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0051233 // spindle midzone // inferred from electronic annotation","0003677 // DNA binding // inferred from sequence or structural similarity /// 0003677 // DNA binding // inferred from electronic annotation /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from direct assay /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008201 // heparin binding // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0016504 // peptidase activator activity // inferred from electronic annotation /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation /// 0033130 // acetylcholine receptor binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046914 // transition metal ion binding // inferred from electronic annotation /// 0051425 // PTB domain binding // inferred from physical interaction","chr21:27252864-27543138 (-) // 93.89 // q21.3"]
["11762742_at",0.14647388,-0.19692016,0.017271042,-0.017271042,-0.1072793,0.02912116,0.9528033,0.8567889,1.0144876,0.020751266,1.0144876,"up","","","","","","chr11:120361275-120361829 (+) // 3.84 // q23.3"]
["11723929_a_at",0.0,0.011074305,0.0,-0.14640021,-0.08604932,0.2515502,0.9949016,0.9838035,-1.0018562,-0.0026754595,1.0018562,"down","OGDHL",55753.0,"0006096 // glycolysis // inferred from electronic annotation /// 0006099 // tricarboxylic acid cycle // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // inferred from electronic annotation","0004591 // oxoglutarate dehydrogenase (succinyl-transferring) activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016624 // oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor // inferred from electronic annotation /// 0030976 // thiamine pyrophosphate binding // inferred from electronic annotation","chr10:50942686-50970425 (-) // 98.53 // q11.23"]
["11737032_x_at",-0.07447505,-0.13930988,-0.05434203,0.0568614,0.1561966,0.05434203,0.2214827,0.013384469,-1.1317136,-0.17850894,1.1317136,"down","FBXL13",222235.0,"","","","chr7:102453307-102715015 (-) // 91.02 // q22.1"]
["11753745_x_at",-0.025302887,-0.021992683,-0.06033516,0.021992683,0.06059456,0.15003395,0.35190377,0.046597738,-1.0817876,-0.113417245,1.0817876,"down","CDKN2A",1029.0,"0000075 // cell cycle checkpoint // inferred from mutant phenotype /// 0000080 // G1 phase of mitotic cell cycle // traceable author statement /// 0000082 // G1/S transition of mitotic cell cycle // inferred from direct assay /// 0000209 // protein polyubiquitination // inferred from direct assay /// 0000278 // mitotic cell cycle // traceable author statement /// 0001953 // negative regulation of cell-matrix adhesion // inferred from mutant phenotype /// 0006309 // apoptotic DNA fragmentation // inferred from mutant phenotype /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006364 // rRNA processing // inferred from electronic annotation /// 0006469 // negative regulation of protein kinase activity // inferred from mutant phenotype /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from direct assay /// 0006917 // induction of apoptosis // inferred from mutant phenotype /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from mutant phenotype /// 0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from direct assay /// 0007050 // cell cycle arrest // inferred from mutant phenotype /// 0007265 // Ras protein signal transduction // inferred from expression pattern /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0008637 // apoptotic mitochondrial changes // inferred from mutant phenotype /// 0010389 // regulation of G2/M transition of mitotic cell cycle // inferred from mutant phenotype /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0030889 // negative regulation of B cell proliferation // inferred from sequence or structural similarity /// 0031647 // regulation of protein stability // inferred from sequence or structural similarity /// 0031648 // protein destabilization // inferred from direct assay /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0033088 // negative regulation of immature T cell proliferation in thymus // inferred from sequence or structural similarity /// 0033235 // positive regulation of protein sumoylation // inferred from mutant phenotype /// 0034393 // positive regulation of smooth muscle cell apoptotic process // inferred from sequence or structural similarity /// 0035986 // senescence-associated heterochromatin focus assembly // inferred from mutant phenotype /// 0042326 // negative regulation of phosphorylation // inferred from direct assay /// 0043517 // positive regulation of DNA damage response, signal transduction by p53 class mediator // inferred from direct assay /// 0045736 // negative regulation of cyclin-dependent protein kinase activity // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0046825 // regulation of protein export from nucleus // inferred from mutant phenotype /// 0048103 // somatic stem cell division // inferred from sequence or structural similarity /// 0050821 // protein stabilization // inferred from direct assay /// 0051444 // negative regulation of ubiquitin-protein ligase activity // inferred from sequence or structural similarity /// 0070534 // protein K63-linked ubiquitination // inferred from direct assay /// 0071158 // positive regulation of cell cycle arrest // inferred from direct assay /// 0090398 // cellular senescence // inferred from mutant phenotype /// 0090399 // replicative senescence // inferred from mutant phenotype /// 2000111 // positive regulation of macrophage apoptotic process // inferred from sequence or structural similarity /// 2000774 // positive regulation of cellular senescence // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016604 // nuclear body // inferred from direct assay /// 0035985 // senescence-associated heterochromatin focus // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay","0002039 // p53 binding // inferred from physical interaction /// 0003677 // DNA binding // inferred from electronic annotation /// 0004861 // cyclin-dependent protein kinase inhibitor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0016301 // kinase activity // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0051059 // NF-kappaB binding // inferred from direct assay /// 0055105 // ubiquitin-protein ligase inhibitor activity // inferred from sequence or structural similarity /// 0070215 // MDM2 binding // inferred from physical interaction","chr9:21971003-21994330 (-) // 98.75 // p21.3"]
["11755686_a_at",-0.012004852,0.012004852,0.02844429,-0.020082474,0.035360336,-0.07022667,0.7657345,0.44286877,1.0194547,0.027797695,1.0194547,"up","CPOX",1371.0,"0006778 // porphyrin-containing compound metabolic process // traceable author statement /// 0006779 // porphyrin-containing compound biosynthetic process // inferred from electronic annotation /// 0006782 // protoporphyrinogen IX biosynthetic process // inferred from electronic annotation /// 0006783 // heme biosynthetic process // traceable author statement /// 0006783 // heme biosynthetic process // inferred from electronic annotation /// 0010035 // response to inorganic substance // inferred from electronic annotation /// 0010039 // response to iron ion // inferred from electronic annotation /// 0010288 // response to lead ion // inferred from electronic annotation /// 0017085 // response to insecticide // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046685 // response to arsenic-containing substance // inferred from electronic annotation /// 0051597 // response to methylmercury // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005739 // mitochondrion // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005758 // mitochondrial intermembrane space // traceable author statement /// 0005758 // mitochondrial intermembrane space // inferred from electronic annotation","0004109 // coproporphyrinogen oxidase activity // traceable author statement /// 0004109 // coproporphyrinogen oxidase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay","chr3:98298297-98301039 (-) // 97.88 // q11.2"]
["11760049_at",-0.11525154,0.1674552,-0.05529332,0.035303116,0.06671333,-0.035302877,0.93715525,0.8110818,-1.0162587,-0.023267725,1.0162587,"down","LINC00308",54143.0,"","","","chr21:23484089-23487433 (+) // 45.05 // q21.1"]
["11743408_x_at",0.06189823,-0.021821022,0.104065895,0.003501892,-0.0884819,-0.003501892,0.5618589,0.17688268,1.0552185,0.0775417,1.0552185,"up","RBM25",58517.0,"0000381 // regulation of alternative nuclear mRNA splicing, via spliceosome // inferred from direct assay /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from direct assay /// 0008380 // RNA splicing // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003729 // mRNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction","chr14:73525143-73588842 (+) // 92.57 // q24.2"]
["11737366_a_at",0.029792786,-0.22054982,-0.16365242,0.10748029,0.13565159,-0.029792786,0.47057694,0.107134864,-1.1401705,-0.18924952,1.1401705,"down","LRRC66",339977.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr4:52859809-52883786 (-) // 99.71 // q12"]
["11762320_a_at",0.07042837,-0.04745102,-0.022115707,-0.112531185,0.04599762,0.022115707,0.9390318,0.81669813,1.0105166,0.0150930835,1.0105166,"up","C9orf114",51490.0,"","","","chr9:131583936-131592090 (-) // 80.95 // q34.11"]
["11734211_at",-0.0021173954,0.06877828,0.0021176338,0.046648264,-0.03352022,-0.10834646,0.6988661,0.33821437,1.0386183,0.054665588,1.0386183,"up","TMPRSS11B",132724.0,"0006508 // proteolysis // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr4:69092378-69111438 (-) // 77.6 // q13.2"]
["11737576_at",0.022756577,-0.022756577,0.104934216,-0.115741014,0.16850805,-0.110400915,0.85621595,0.6201607,1.0382756,0.054189444,1.0382756,"up","NPHS1",4868.0,"0000165 // MAPK cascade // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007254 // JNK cascade // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007517 // muscle organ development // inferred from electronic annotation /// 0007519 // skeletal muscle tissue development // inferred from electronic annotation /// 0007520 // myoblast fusion // inferred from electronic annotation /// 0007588 // excretion // traceable author statement /// 0032836 // glomerular basement membrane development // inferred from expression pattern /// 0044062 // regulation of excretion // inferred from electronic annotation /// 0072015 // glomerular visceral epithelial cell development // inferred from expression pattern","0005624 // membrane fraction // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0036057 // slit diaphragm // inferred from sequence or structural similarity /// 0042995 // cell projection // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0045121 // membrane raft // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0030507 // spectrin binding // inferred from electronic annotation /// 0051393 // alpha-actinin binding // inferred from electronic annotation","chr19:36316273-36342739 (-) // 85.95 // q13.12"]
["11745924_at",0.11361265,0.14416742,-0.2037611,0.0026669502,-0.0026669502,-0.04712248,0.9257195,0.77906215,1.0236439,0.033713855,1.0236439,"up","ZEB1-AS1",220930.0,"","","","chr10:31605456-31608002 (-) // 91.9 // p11.22"]
["11748327_x_at",-0.03316021,0.03316021,0.07875013,-0.04835701,-0.1670742,0.0593791,0.703168,0.3441638,1.0557494,0.07826745,1.0557494,"up","ZNF138",7697.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:64254799-64292620 (+) // 99.63 // q11.21"]
["11739347_a_at",0.008317471,0.029273033,0.02255249,-0.03433895,-0.008317471,-0.3690467,0.62953895,0.24769895,1.1151842,0.15728201,1.1151842,"up","PIP4K2A",5305.0,"0016310 // phosphorylation // non-traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0035855 // megakaryocyte development // inferred from electronic annotation /// 0046488 // phosphatidylinositol metabolic process // inferred from electronic annotation /// 0046854 // phosphatidylinositol phosphorylation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016307 // phosphatidylinositol phosphate kinase activity // inferred from electronic annotation /// 0016308 // 1-phosphatidylinositol-4-phosphate 5-kinase activity // non-traceable author statement /// 0016309 // 1-phosphatidylinositol-5-phosphate 4-kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr10:22823784-23003484 (-) // 89.51 // p12.2"]
["11733303_at",-0.07526398,-0.023929596,-0.14822054,0.26009488,0.032461405,0.023929358,0.44559166,0.092369124,-1.1391569,-0.18796651,1.1391569,"down","ZNF790",388536.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:37307578-37341215 (-) // 82.83 // q13.12"]
["11717730_s_at",0.04451084,0.018462181,0.099038124,-0.12054157,-0.018462181,-0.25356007,0.39084712,0.062340982,1.1367054,0.1848584,1.1367054,"up","SQLE",6713.0,"0006695 // cholesterol biosynthetic process // traceable author statement /// 0006725 // cellular aromatic compound metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0016126 // sterol biosynthetic process // non-traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // non-traceable author statement /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004497 // monooxygenase activity // inferred from electronic annotation /// 0004506 // squalene monooxygenase activity // non-traceable author statement /// 0004506 // squalene monooxygenase activity // traceable author statement /// 0004506 // squalene monooxygenase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0050660 // flavin adenine dinucleotide binding // inferred from electronic annotation","chr8:126010716-126034525 (+) // 93.18 // q24.13"]
["11759157_at",-0.12247801,-0.027320385,-0.300668,0.11581993,0.027320623,0.22858524,0.36123997,0.05048364,-1.2092093,-0.274064,1.2092093,"down","HIST1H2BC /// HIST1H2BE /// HIST1H2BF /// HIST1H2BG /// HIST1H2BI","8339 /// 8343 /// 8344 /// 8346 /// 8347","0006334 // nucleosome assembly // non-traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0042742 // defense response to bacterium // inferred from electronic annotation","0000786 // nucleosome // non-traceable author statement /// 0000786 // nucleosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation","chr6:26199716-26200972 (+) // 98.97 // p22.2"]
["11758393_s_at",-4.1675568E-4,0.022808552,0.07583141,-0.027927876,-0.0071606636,4.1675568E-4,0.5185911,0.13993633,1.0311816,0.044298388,1.0311816,"up","DNAJC30",84277.0,"0006457 // protein folding // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation","0031072 // heat shock protein binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // inferred from electronic annotation","chr7:73095247-73095804 (-) // 99.46 // q11.23"]
["11728679_a_at",-0.002562046,0.002562046,-0.09428072,0.15116692,0.010734558,-0.14804983,0.89879674,0.7151329,-1.0252986,-0.036044125,1.0252986,"down","CD163",9332.0,"0006953 // acute-phase response // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from electronic annotation","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005044 // scavenger receptor activity // non-traceable author statement /// 0005044 // scavenger receptor activity // inferred from electronic annotation /// 0005044 // scavenger receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr12:7623411-7656489 (-) // 96.16 // p13.31"]
["11716222_a_at",-0.044700623,0.06766009,-0.18041849,0.033397913,-0.033397913,0.08649254,0.7167725,0.3650976,-1.0579835,-0.08131715,1.0579835,"down","RNASE1",6035.0,"0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004519 // endonuclease activity // inferred from electronic annotation /// 0004522 // pancreatic ribonuclease activity // inferred from electronic annotation /// 0004522 // pancreatic ribonuclease activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation","chr14:21269392-21270495 (-) // 88.5 // q11.2"]
["11716171_s_at",0.04384327,0.042168617,-7.2288513E-4,-0.060357094,-0.022488594,7.2288513E-4,0.4115711,0.07237385,1.0394381,0.055803884,1.0394381,"up","LMNB2",84823.0,"","0005634 // nucleus // inferred from electronic annotation /// 0005637 // nuclear inner membrane // inferred from electronic annotation /// 0005638 // lamin filament // inferred from electronic annotation /// 0005652 // nuclear lamina // non-traceable author statement /// 0005882 // intermediate filament // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005198 // structural molecule activity // inferred from electronic annotation","chr19:2428163-2456994 (-) // 98.03 // p13.3"]
["11739656_at",-0.0010991096,0.0010991096,0.018213272,-0.18380451,-0.14547253,0.21898651,0.9157563,0.7556125,1.0301359,0.042834632,1.0301359,"up","RPL28",6158.0,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral infectious cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr19:55897299-55899741 (+) // 88.3 // q13.42"]
["11715190_s_at",-0.044300795,0.12979412,0.016160965,-0.02785039,-0.016160965,0.016160965,0.7758925,0.45872602,1.030374,0.043168165,1.030374,"up","FAM221A",340277.0,"","","","chr7:23719748-23742268 (+) // 96.37 // p15.3"]
["11755011_x_at",0.11649704,-0.01792717,0.121097565,-0.006722927,0.006723404,-0.038267612,0.5242537,0.14456023,1.0614072,0.08597825,1.0614072,"up","ZFP106",64397.0,"0008286 // insulin receptor signaling pathway // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation","0001515 // opioid peptide activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr15:42707336-42749765 (-) // 89.97 // q15.1"]
["11725946_a_at",-0.07889247,0.17593002,-0.12241864,-0.08704233,0.08911252,0.07889271,0.918409,0.7616687,-1.024875,-0.035448022,1.024875,"down","MPP2",4355.0,"0007165 // signal transduction // traceable author statement","0005624 // membrane fraction // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from direct assay","0004385 // guanylate kinase activity // traceable author statement","chr17:41952727-41985194 (-) // 97.82 // q21.31"]
["11736458_x_at",-0.040230274,-0.14585447,0.1769247,-0.059705734,0.040230274,0.15996742,0.88574505,0.6849977,-1.0351816,-0.049883936,1.0351816,"down","KCNK6",9424.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006813 // potassium ion transport // traceable author statement /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0071805 // potassium ion transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0008076 // voltage-gated potassium channel complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005242 // inward rectifier potassium channel activity // traceable author statement /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005267 // potassium channel activity // inferred from electronic annotation","chr19:38810468-38819553 (+) // 56.19 // q13.2"]
["11748774_x_at",0.04015684,0.024937153,0.012333393,-0.09833717,-0.01233387,-0.08504534,0.30271208,0.031028064,1.0651436,0.09104792,1.0651436,"up","CTSL2",1515.0,"0006508 // proteolysis // inferred from electronic annotation /// 0007154 // cell communication // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0008584 // male gonad development // inferred from electronic annotation /// 0009267 // cellular response to starvation // inferred from electronic annotation /// 0009749 // response to glucose stimulus // inferred from electronic annotation /// 0010259 // multicellular organismal aging // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0021675 // nerve development // inferred from electronic annotation /// 0034698 // response to gonadotropin stimulus // inferred from electronic annotation /// 0046697 // decidualization // inferred from electronic annotation /// 0048102 // autophagic cell death // inferred from electronic annotation /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation /// 0060008 // Sertoli cell differentiation // inferred from electronic annotation","0005625 // soluble fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0005773 // vacuole // inferred from electronic annotation /// 0005902 // microvillus // inferred from electronic annotation /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0030141 // secretory granule // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043204 // perikaryon // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from electronic annotation","0004177 // aminopeptidase activity // inferred from electronic annotation /// 0004197 // cysteine-type endopeptidase activity // inferred from electronic annotation /// 0004197 // cysteine-type endopeptidase activity // traceable author statement /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // traceable author statement /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0030984 // kininogen binding // inferred from electronic annotation /// 0042277 // peptide binding // inferred from electronic annotation","chr9:99794398-99801406 (-) // 81.74 // q22.33"]
["11721376_at",0.020793438,-0.020793438,0.08976841,0.12005234,-0.44649744,-0.10671139,0.71234155,0.35746148,1.1284232,0.17430826,1.1284232,"up","BCL2",596.0,"0000082 // G1/S transition of mitotic cell cycle // inferred from electronic annotation /// 0000209 // protein polyubiquitination // inferred from direct assay /// 0000902 // cell morphogenesis // inferred from electronic annotation /// 0001101 // response to acid // inferred from electronic annotation /// 0001503 // ossification // inferred from electronic annotation /// 0001541 // ovarian follicle development // inferred from electronic annotation /// 0001656 // metanephros development // inferred from electronic annotation /// 0001657 // ureteric bud development // inferred from electronic annotation /// 0001658 // branching involved in ureteric bud morphogenesis // inferred from electronic annotation /// 0001662 // behavioral fear response // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001776 // leukocyte homeostasis // inferred from electronic annotation /// 0001782 // B cell homeostasis // inferred from electronic annotation /// 0001822 // kidney development // inferred from electronic annotation /// 0001836 // release of cytochrome c from mitochondria // inferred from sequence or structural similarity /// 0001836 // release of cytochrome c from mitochondria // non-traceable author statement /// 0001952 // regulation of cell-matrix adhesion // inferred from electronic annotation /// 0002260 // lymphocyte homeostasis // inferred from electronic annotation /// 0002320 // lymphoid progenitor cell differentiation // inferred from electronic annotation /// 0002326 // B cell lineage commitment // inferred from electronic annotation /// 0002360 // T cell lineage commitment // inferred from electronic annotation /// 0002520 // immune system development // inferred from electronic annotation /// 0003014 // renal system process // inferred from electronic annotation /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0006582 // melanin metabolic process // inferred from electronic annotation /// 0006808 // regulation of nitrogen utilization // inferred from electronic annotation /// 0006874 // cellular calcium ion homeostasis // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from direct assay /// 0006916 // anti-apoptosis // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0006959 // humoral immune response // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from mutant phenotype /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0007015 // actin filament organization // inferred from electronic annotation /// 0007409 // axonogenesis // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0007565 // female pregnancy // non-traceable author statement /// 0007568 // aging // inferred from electronic annotation /// 0007569 // cell aging // inferred from electronic annotation /// 0007584 // response to nutrient // inferred from electronic annotation /// 0008219 // cell death // inferred from direct assay /// 0008219 // cell death // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0008584 // male gonad development // inferred from electronic annotation /// 0008629 // induction of apoptosis by intracellular signals // traceable author statement /// 0008633 // activation of pro-apoptotic gene products // traceable author statement /// 0009314 // response to radiation // non-traceable author statement /// 0009408 // response to heat // inferred from electronic annotation /// 0009605 // response to external stimulus // inferred from electronic annotation /// 0009636 // response to toxin // inferred from direct assay /// 0009636 // response to toxin // inferred from electronic annotation /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0010035 // response to inorganic substance // inferred from electronic annotation /// 0010039 // response to iron ion // inferred from direct assay /// 0010044 // response to aluminum ion // inferred from electronic annotation /// 0010224 // response to UV-B // inferred from electronic annotation /// 0010332 // response to gamma radiation // inferred from electronic annotation /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0010559 // regulation of glycoprotein biosynthetic process // inferred from electronic annotation /// 0014031 // mesenchymal cell development // inferred from electronic annotation /// 0014042 // positive regulation of neuron maturation // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0014911 // positive regulation of smooth muscle cell migration // inferred from electronic annotation /// 0016049 // cell growth // inferred from electronic annotation /// 0016337 // cell-cell adhesion // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from electronic annotation /// 0018107 // peptidyl-threonine phosphorylation // inferred from electronic annotation /// 0021747 // cochlear nucleus development // inferred from electronic annotation /// 0022612 // gland morphogenesis // inferred from electronic annotation /// 0022898 // regulation of transmembrane transporter activity // inferred from direct assay /// 0030097 // hemopoiesis // inferred from electronic annotation /// 0030183 // B cell differentiation // inferred from electronic annotation /// 0030217 // T cell differentiation // inferred from electronic annotation /// 0030279 // negative regulation of ossification // inferred from electronic annotation /// 0030307 // positive regulation of cell growth // inferred from direct assay /// 0030308 // negative regulation of cell growth // inferred from electronic annotation /// 0030318 // melanocyte differentiation // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // inferred from electronic annotation /// 0030890 // positive regulation of B cell proliferation // inferred from mutant phenotype /// 0031000 // response to caffeine // inferred from electronic annotation /// 0031103 // axon regeneration // inferred from electronic annotation /// 0031647 // regulation of protein stability // inferred from electronic annotation /// 0032835 // glomerulus development // inferred from electronic annotation /// 0032848 // negative regulation of cellular pH reduction // inferred from direct assay /// 0032868 // response to insulin stimulus // inferred from electronic annotation /// 0032880 // regulation of protein localization // inferred from electronic annotation /// 0033033 // negative regulation of myeloid cell apoptotic process // inferred from electronic annotation /// 0033077 // T cell differentiation in thymus // inferred from electronic annotation /// 0033591 // response to L-ascorbic acid // inferred from electronic annotation /// 0033689 // negative regulation of osteoblast proliferation // inferred from electronic annotation /// 0034097 // response to cytokine stimulus // inferred from direct assay /// 0034097 // response to cytokine stimulus // inferred from electronic annotation /// 0034349 // glial cell apoptotic process // inferred from electronic annotation /// 0035094 // response to nicotine // inferred from direct assay /// 0035094 // response to nicotine // inferred from electronic annotation /// 0035265 // organ growth // inferred from electronic annotation /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0040007 // growth // inferred from electronic annotation /// 0040018 // positive regulation of multicellular organism growth // inferred from electronic annotation /// 0042100 // B cell proliferation // inferred from direct assay /// 0042221 // response to chemical stimulus // inferred from electronic annotation /// 0042493 // response to drug // inferred from direct assay /// 0042493 // response to drug // inferred from mutant phenotype /// 0042493 // response to drug // inferred from electronic annotation /// 0042542 // response to hydrogen peroxide // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043029 // T cell homeostasis // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043067 // regulation of programmed cell death // inferred from electronic annotation /// 0043085 // positive regulation of catalytic activity // inferred from electronic annotation /// 0043375 // CD8-positive, alpha-beta T cell lineage commitment // inferred from electronic annotation /// 0043434 // response to peptide hormone stimulus // inferred from electronic annotation /// 0043496 // regulation of protein homodimerization activity // inferred from direct assay /// 0043497 // regulation of protein heterodimerization activity // inferred from direct assay /// 0043524 // negative regulation of neuron apoptotic process // inferred from direct assay /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0043583 // ear development // inferred from electronic annotation /// 0043627 // response to estrogen stimulus // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045471 // response to ethanol // inferred from electronic annotation /// 0045636 // positive regulation of melanocyte differentiation // inferred from electronic annotation /// 0045930 // negative regulation of mitotic cell cycle // inferred from electronic annotation /// 0046671 // negative regulation of retinal cell programmed cell death // inferred from electronic annotation /// 0046688 // response to copper ion // inferred from electronic annotation /// 0046902 // regulation of mitochondrial membrane permeability // inferred from sequence or structural similarity /// 0048041 // focal adhesion assembly // inferred from electronic annotation /// 0048066 // developmental pigmentation // inferred from electronic annotation /// 0048070 // regulation of developmental pigmentation // inferred from electronic annotation /// 0048087 // positive regulation of developmental pigmentation // inferred from electronic annotation /// 0048536 // spleen development // inferred from electronic annotation /// 0048538 // thymus development // inferred from electronic annotation /// 0048545 // response to steroid hormone stimulus // inferred from electronic annotation /// 0048546 // digestive tract morphogenesis // inferred from electronic annotation /// 0048589 // developmental growth // inferred from electronic annotation /// 0048599 // oocyte development // inferred from electronic annotation /// 0048709 // oligodendrocyte differentiation // inferred from electronic annotation /// 0048743 // positive regulation of skeletal muscle fiber development // inferred from electronic annotation /// 0048753 // pigment granule organization // inferred from electronic annotation /// 0048873 // homeostasis of number of cells within a tissue // inferred from electronic annotation /// 0050790 // regulation of catalytic activity // inferred from electronic annotation /// 0050853 // B cell receptor signaling pathway // inferred from mutant phenotype /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation /// 0051402 // neuron apoptotic process // traceable author statement /// 0051402 // neuron apoptotic process // inferred from electronic annotation /// 0051412 // response to corticosterone stimulus // inferred from electronic annotation /// 0051593 // response to folic acid // inferred from electronic annotation /// 0051607 // defense response to virus // inferred from direct assay /// 0051726 // regulation of cell cycle // inferred from electronic annotation /// 0051881 // regulation of mitochondrial membrane potential // inferred from sequence or structural similarity /// 0051902 // negative regulation of mitochondrial depolarization // traceable author statement /// 0051924 // regulation of calcium ion transport // inferred from direct assay /// 0070059 // intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress // inferred from direct assay /// 0071310 // cellular response to organic substance // inferred from electronic annotation /// 0072593 // reactive oxygen species metabolic process // inferred from electronic annotation /// 2001234 // negative regulation of apoptotic signaling pathway // inferred from mutant phenotype","0005622 // intracellular // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from direct assay /// 0005741 // mitochondrial outer membrane // traceable author statement /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from direct assay /// 0031965 // nuclear membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation /// 0043209 // myelin sheath // inferred from electronic annotation /// 0046930 // pore complex // inferred from direct assay","0002020 // protease binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0015267 // channel activity // inferred from direct assay /// 0019903 // protein phosphatase binding // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0051400 // BH domain binding // inferred from electronic annotation /// 0051434 // BH3 domain binding // inferred from physical interaction /// 0051721 // protein phosphatase 2A binding // inferred from electronic annotation","chr18:60790581-60987019 (-) // 96.73 // q21.33"]
["11733258_a_at",0.009358883,-0.013297081,0.021140575,-0.0040225983,-0.110361576,0.0040225983,0.6920231,0.32826316,1.0299122,0.0425214,1.0299122,"up","TAOK3",51347.0,"0000165 // MAPK cascade // inferred from mutant phenotype /// 0006281 // DNA repair // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from mutant phenotype /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006469 // negative regulation of protein kinase activity // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from direct assay /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0031572 // G2/M transition DNA damage checkpoint // inferred from mutant phenotype /// 0032874 // positive regulation of stress-activated MAPK cascade // inferred from mutant phenotype /// 0043507 // positive regulation of JUN kinase activity // inferred from mutant phenotype /// 0046329 // negative regulation of JNK cascade // inferred from direct assay /// 0046330 // positive regulation of JNK cascade // inferred from mutant phenotype /// 0046777 // protein autophosphorylation // inferred from direct assay","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004860 // protein kinase inhibitor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr12:118587605-118810750 (-) // 95.99 // q24.23"]
["11749008_x_at",-0.06549454,-0.24717712,0.032618523,-0.032618523,0.073316574,0.06642532,0.6060844,0.21986894,-1.09358,-0.12905878,1.09358,"down","RIMS1",22999.0,"0006461 // protein complex assembly // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006836 // neurotransmitter transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006887 // exocytosis // inferred from electronic annotation /// 0006944 // cellular membrane fusion // non-traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007269 // neurotransmitter secretion // traceable author statement /// 0007601 // visual perception // inferred from electronic annotation /// 0014047 // glutamate secretion // traceable author statement /// 0016079 // synaptic vesicle exocytosis // traceable author statement /// 0017156 // calcium ion-dependent exocytosis // traceable author statement /// 0045055 // regulated secretory pathway // non-traceable author statement /// 0046903 // secretion // non-traceable author statement /// 0048169 // regulation of long-term neuronal synaptic plasticity // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0042734 // presynaptic membrane // inferred from sequence or structural similarity /// 0042734 // presynaptic membrane // non-traceable author statement /// 0042734 // presynaptic membrane // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0005083 // small GTPase regulator activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0017137 // Rab GTPase binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:72922595-73110829 (+) // 98.58 // q13"]
["11733563_a_at",0.03867817,0.08408117,0.13301945,-0.100914,-0.038678646,-0.1356945,0.20298986,0.010820373,1.1305478,0.17702194,1.1305478,"up","KLHDC10",23008.0,"","","","chr7:129710343-129773593 (+) // 96.7 // q32.2"]
["11725099_at",0.07800484,-0.0037288666,0.146101,0.0037288666,-0.039011,-0.045682907,0.4482977,0.09433357,1.0721059,0.100447394,1.0721059,"up","ESF1",51575.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation","","chr20:13693972-13765647 (-) // 81.99 // p12.1"]
["11717806_a_at",-0.13462353,-0.04403782,0.14723921,0.0077228546,-0.007722378,0.0796957,0.88857806,0.6933085,-1.0260062,-0.037039477,1.0260062,"down","KIAA0913",23053.0,"","","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr10:75545334-75561551 (+) // 97.8 // q22.2"]
["11731605_s_at",0.05111885,0.031158447,0.17544365,-0.08702278,-0.031158447,-0.048833847,0.33900458,0.042125925,1.1031115,0.14157863,1.1031115,"up","HSD17B12",51144.0,"0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0006694 // steroid biosynthetic process // inferred from electronic annotation /// 0006703 // estrogen biosynthetic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0010811 // positive regulation of cell-substrate adhesion // inferred from electronic annotation /// 0019432 // triglyceride biosynthetic process // traceable author statement /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0035338 // long-chain fatty-acyl-CoA biosynthetic process // traceable author statement /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0001968 // fibronectin binding // inferred from electronic annotation /// 0004303 // estradiol 17-beta-dehydrogenase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005518 // collagen binding // inferred from electronic annotation /// 0008201 // heparin binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation","chr11:43702142-43878165 (+) // 89.3 // p11.2"]
["11728861_a_at",0.105718136,0.0659461,-0.13073325,0.0948894,-0.0659461,-0.07097077,0.9249658,0.7767465,1.0193523,0.027652774,1.0193523,"up","DCAF17",80067.0,"0016567 // protein ubiquitination // inferred by curator /// 0016567 // protein ubiquitination // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0080008 // CUL4-RING ubiquitin ligase complex // inferred from direct assay","","chr2:172290760-172341360 (+) // 78.07 // q31.1"]
["11757078_s_at",0.012191534,0.024353504,-0.23790407,0.007968426,-0.007968426,-0.08798337,0.8901012,0.6976053,-1.0265415,-0.03779191,1.0265415,"down","SLC9B1",150159.0,"0006810 // transport // inferred from electronic annotation /// 0006812 // cation transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0015299 // solute:hydrogen antiporter activity // inferred from electronic annotation","chr22:16909497-16958634 (-) // 96.65 // q11.1"]
["11720567_a_at",0.04944849,0.28163767,0.014378071,-0.06370354,-0.2110784,-0.014378071,0.47244048,0.10818452,1.1579247,0.21154137,1.1579247,"up","PPFIA3",8541.0,"0007269 // neurotransmitter secretion // inferred from electronic annotation /// 0048172 // regulation of short-term neuronal synaptic plasticity // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr19:49622662-49654283 (+) // 98.42 // q13.33"]
["11761339_s_at",-0.0025091171,0.04792738,-0.2546134,-0.08172655,0.02164793,0.0025091171,0.86348045,0.63597494,-1.0356538,-0.05054186,1.0356538,"down","FAM115C",285966.0,"","","","chr7:143411506-143425525 (+) // 88.21 // q35 /// chr7:143332288-143515506 (+) // 83.95 // q35 /// chr7:143336322-143519539 (-) // 83.14 // q35"]
["11725070_a_at",0.012081146,0.055588722,0.024901867,-0.021050453,-0.012081623,-0.1051712,0.4179691,0.075994104,1.0547918,0.07695827,1.0547918,"up","PHF17",79960.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006915 // apoptotic process // non-traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006950 // response to stress // non-traceable author statement /// 0030308 // negative regulation of cell growth // non-traceable author statement /// 0043966 // histone H3 acetylation // inferred from direct assay /// 0043981 // histone H4-K5 acetylation // inferred from direct assay /// 0043982 // histone H4-K8 acetylation // inferred from direct assay /// 0043983 // histone H4-K12 acetylation // inferred from direct assay /// 0043984 // histone H4-K16 acetylation // inferred from direct assay","0000123 // histone acetyltransferase complex // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr4:129730778-129796379 (+) // 96.56 // q28.2"]
["11762246_at",0.07554579,0.18739796,0.16587758,-0.07554555,-0.083912134,-0.14989352,0.14445919,0.00407551,1.1859617,0.24605745,1.1859617,"up","","","0006096 // glycolysis // inferred from electronic annotation","","0016868 // intramolecular transferase activity, phosphotransferases // inferred from electronic annotation","chr3:9390070-9391131 (+) // 99.43 // p25.3"]
["11735348_a_at",-0.025173664,0.051163673,0.18081379,0.0078577995,-0.0078577995,-0.10803652,0.59523153,0.20940052,1.0754547,0.10494677,1.0754547,"up","ZNF642",339559.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:40943301-40962014 (+) // 94.35 // p34.2"]
["11721426_at",-0.02554226,-0.10535288,-0.008648396,0.008648872,0.009897232,0.041815758,0.4643318,0.10367941,-1.0472713,-0.06663516,1.0472713,"down","FZD5",7855.0,"0000578 // embryonic axis specification // inferred from direct assay /// 0001525 // angiogenesis // not recorded /// 0001525 // angiogenesis // inferred from electronic annotation /// 0001944 // vasculature development // inferred from electronic annotation /// 0006915 // apoptotic process // not recorded /// 0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007409 // axonogenesis // not recorded /// 0007420 // brain development // not recorded /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0008406 // gonad development // not recorded /// 0008595 // anterior/posterior axis specification, embryo // inferred from direct assay /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from sequence or structural similarity /// 0031076 // embryonic camera-type eye development // not recorded /// 0031076 // embryonic camera-type eye development // inferred from electronic annotation /// 0031077 // post-embryonic camera-type eye development // not recorded /// 0031077 // post-embryonic camera-type eye development // inferred from electronic annotation /// 0032729 // positive regulation of interferon-gamma production // inferred from mutant phenotype /// 0033077 // T cell differentiation in thymus // not recorded /// 0033077 // T cell differentiation in thymus // inferred from electronic annotation /// 0043507 // positive regulation of JUN kinase activity // inferred from electronic annotation /// 0044332 // Wnt receptor signaling pathway involved in dorsal/ventral axis specification // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from genetic interaction /// 0048469 // cell maturation // inferred from electronic annotation /// 0060061 // Spemann organizer formation // inferred from direct assay /// 0060070 // canonical Wnt receptor signaling pathway // inferred from direct assay /// 0060070 // canonical Wnt receptor signaling pathway // inferred from mutant phenotype /// 0060070 // canonical Wnt receptor signaling pathway // inferred from electronic annotation /// 0060561 // apoptotic process involved in morphogenesis // inferred from electronic annotation /// 0060716 // labyrinthine layer blood vessel development // not recorded /// 0060716 // labyrinthine layer blood vessel development // inferred from electronic annotation /// 0071219 // cellular response to molecule of bacterial origin // inferred from direct assay","0000139 // Golgi membrane // inferred from electronic annotation /// 0005737 // cytoplasm // not recorded /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // not recorded /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0042995 // cell projection // not recorded","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0017147 // Wnt-protein binding // inferred from physical interaction /// 0017147 // Wnt-protein binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0030165 // PDZ domain binding // not recorded /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0042813 // Wnt-activated receptor activity // not recorded /// 0042813 // Wnt-activated receptor activity // inferred by curator","chr2:208627309-208634287 (-) // 97.55 // q33.3"]
["11722542_a_at",-0.024599075,-0.03503537,0.05974531,0.024599075,-0.05368328,0.09808445,0.886984,0.6877505,-1.0160441,-0.022963079,1.0160441,"down","HIVEP2",3097.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:143072611-143158186 (-) // 98.17 // q24.2"]
["11741697_a_at",0.019616127,-0.01729393,-0.035793304,-0.057777405,0.01729393,0.061335564,0.87574637,0.66179127,-1.0126305,-0.01810779,1.0126305,"down","ITPA",3704.0,"0006193 // ITP catabolic process // inferred from electronic annotation /// 0009117 // nucleotide metabolic process // inferred from electronic annotation /// 0051276 // chromosome organization // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0035870 // dITP diphosphatase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047429 // nucleoside-triphosphate diphosphatase activity // inferred from electronic annotation","chr20:3190055-3204504 (+) // 78.39 // p13"]
["11728125_a_at",5.681515E-4,0.07350969,-0.03423643,0.011234522,-0.092021465,-5.681515E-4,0.756161,0.4250031,1.028398,0.04039876,1.028398,"up","GZMH",2999.0,"0006508 // proteolysis // inferred from electronic annotation /// 0006508 // proteolysis // non-traceable author statement /// 0006915 // apoptotic process // non-traceable author statement /// 0019835 // cytolysis // inferred from electronic annotation","0005737 // cytoplasm // non-traceable author statement","0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // non-traceable author statement /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr14:25075688-25078940 (-) // 86.52 // q12"]
["11732445_a_at",-0.11907816,0.060756683,0.035642624,-0.106841564,0.026710987,-0.026710987,0.89279115,0.7023941,1.019636,0.028054265,1.019636,"up","RBPMS",11030.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006396 // RNA processing // traceable author statement /// 0010862 // positive regulation of pathway-restricted SMAD protein phosphorylation // inferred from direct assay /// 0060391 // positive regulation of SMAD protein import into nucleus // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008143 // poly(A) RNA binding // inferred from direct assay","chr8:30241924-30430508 (+) // 83.01 // p12"]
["11759850_at",-0.10869503,0.09967971,0.12667775,0.037904263,-0.039607763,-0.037904263,0.8196787,0.5414777,1.0370054,0.05242344,1.0370054,"up","MYO3A",53904.0,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0007601 // visual perception // inferred from electronic annotation /// 0007605 // sensory perception of sound // inferred from mutant phenotype /// 0007605 // sensory perception of sound // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0050896 // response to stimulus // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0016459 // myosin complex // inferred from electronic annotation /// 0030175 // filopodium // inferred from direct assay /// 0031941 // filamentous actin // inferred from direct assay","0000146 // microfilament motor activity // inferred from direct assay /// 0000146 // microfilament motor activity // inferred from mutant phenotype /// 0000166 // nucleotide binding // inferred from electronic annotation /// 0003774 // motor activity // inferred from electronic annotation /// 0003779 // actin binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005516 // calmodulin binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0030898 // actin-dependent ATPase activity // inferred from direct assay /// 0043531 // ADP binding // inferred from direct assay /// 0060002 // plus-end directed microfilament motor activity // inferred from direct assay","chr10:26223202-26312410 (+) // 97.45 // p12.1"]
["11738864_a_at",0.03221917,0.23893523,-0.04074335,0.12809682,-0.14223123,-0.03221917,0.7804875,0.4666018,1.066035,0.09225485,1.066035,"up","ABHD12B /// MIR4454","100616234 /// 145447","","","0016787 // hydrolase activity // inferred from electronic annotation","chr14:51338877-51371688 (+) // 81.71 // q22.1"]
["11758135_s_at",-0.05226803,-0.120578766,-0.063770294,0.08799744,0.058011055,0.05226803,0.13981979,0.003699655,-1.1057035,-0.14496453,1.1057035,"down","C14orf2",9556.0,"","0005739 // mitochondrion // inferred from electronic annotation /// 0005753 // mitochondrial proton-transporting ATP synthase complex // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation","","chr14:104378653-104381476 (-) // 64.54 // q32.33"]
["11759293_at",0.0645895,0.009491444,-0.021900177,-0.0047063828,0.0047068596,-0.05758381,0.68214124,0.31475627,1.0256852,0.036588,1.0256852,"up","MLL",4297.0,"0006306 // DNA methylation // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006461 // protein complex assembly // inferred from direct assay /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation /// 0032411 // positive regulation of transporter activity // inferred from mutant phenotype /// 0035162 // embryonic hemopoiesis // traceable author statement /// 0035162 // embryonic hemopoiesis // inferred from electronic annotation /// 0043984 // histone H4-K16 acetylation // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0051568 // histone H3-K4 methylation // inferred from direct assay /// 0051568 // histone H3-K4 methylation // inferred from mutant phenotype /// 0051568 // histone H3-K4 methylation // inferred from electronic annotation /// 0051569 // regulation of histone H3-K4 methylation // inferred from electronic annotation /// 0080182 // histone H3-K4 trimethylation // inferred from direct assay /// 2001040 // positive regulation of cellular response to drug // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0035097 // histone methyltransferase complex // inferred from direct assay /// 0035097 // histone methyltransferase complex // inferred from electronic annotation /// 0044428 // nuclear part // inferred from electronic annotation /// 0071339 // MLL1 complex // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003680 // AT DNA binding // non-traceable author statement /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0018024 // histone-lysine N-methyltransferase activity // inferred from electronic annotation /// 0042800 // histone methyltransferase activity (H3-K4 specific) // inferred from direct assay /// 0042800 // histone methyltransferase activity (H3-K4 specific) // inferred from mutant phenotype /// 0042800 // histone methyltransferase activity (H3-K4 specific) // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0045322 // unmethylated CpG binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070577 // histone acetyl-lysine binding // inferred from direct assay","chr11:118307204-118397546 (+) // 98.0 // q23.3"]
["11759162_x_at",-0.018263817,0.011852741,-0.021575928,0.231143,-0.011852741,0.1467843,0.5216268,0.14224021,-1.095321,-0.13135381,1.095321,"down","KRTAP19-1",337882.0,"","0005882 // intermediate filament // inferred from electronic annotation","","chr21:31852018-31852697 (-) // 97.0 // q22.11"]
["11757683_a_at",0.02673626,0.003004074,-0.003004074,-0.07354164,-0.090031624,0.058192253,0.74518746,0.40877637,1.0309962,0.04403902,1.0309962,"up","IRF2BP2",359948.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0046872 // metal ion binding // inferred from electronic annotation","chr1:234740016-234740725 (-) // 99.02 // q42.3"]
["11746398_a_at",-0.033118248,-0.043636322,-0.0699625,0.033118248,0.050497055,0.08965397,0.16470814,0.0059420974,-1.0767342,-0.10666213,1.0767342,"down","PIGT",51604.0,"0006501 // C-terminal protein lipidation // traceable author statement /// 0006506 // GPI anchor biosynthetic process // inferred from electronic annotation /// 0016255 // attachment of GPI anchor to protein // traceable author statement /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0051402 // neuron apoptotic process // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0030176 // integral to endoplasmic reticulum membrane // non-traceable author statement /// 0042765 // GPI-anchor transamidase complex // traceable author statement /// 0042765 // GPI-anchor transamidase complex // inferred from electronic annotation","0003923 // GPI-anchor transamidase activity // traceable author statement /// 0003923 // GPI-anchor transamidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr20:44044780-44054881 (+) // 94.07 // q13.12"]
["11751936_a_at",-0.045461655,-0.017130375,0.017129898,-0.06860638,0.057433605,0.055805206,0.82194567,0.5452847,-1.0210345,-0.030031584,1.0210345,"down","CDK12",51755.0,"0006397 // mRNA processing // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from sequence or structural similarity /// 0008380 // RNA splicing // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0043405 // regulation of MAP kinase activity // inferred from mutant phenotype /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0070816 // phosphorylation of RNA polymerase II C-terminal domain // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0016607 // nuclear speck // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation /// 0019908 // nuclear cyclin-dependent protein kinase holoenzyme complex // inferred from sequence or structural similarity /// 0019908 // nuclear cyclin-dependent protein kinase holoenzyme complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004693 // cyclin-dependent protein kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008353 // RNA polymerase II carboxy-terminal domain kinase activity // inferred from mutant phenotype /// 0008353 // RNA polymerase II carboxy-terminal domain kinase activity // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0030332 // cyclin binding // inferred from electronic annotation","chr17:37617763-37687686 (+) // 97.45 // q12"]
["11761381_at",-0.16553926,0.0,0.21277261,-0.09905958,0.19309402,0.0,0.9738067,0.9161018,-1.010872,-0.015600339,1.010872,"down","SORBS2",8470.0,"","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement /// 0030018 // Z disc // non-traceable author statement /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005200 // structural constituent of cytoskeleton // traceable author statement /// 0008093 // cytoskeletal adaptor activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008307 // structural constituent of muscle // traceable author statement","chr4:186547819-186877488 (-) // 99.81 // q35.1"]
["11751961_s_at",0.029337883,0.21513534,-0.06212735,-0.14729738,-0.029337883,0.035554886,0.69376457,0.33113053,1.0775903,0.10780883,1.0775903,"up","MTR",4548.0,"0000096 // sulfur amino acid metabolic process // traceable author statement /// 0006479 // protein methylation // inferred from electronic annotation /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0007399 // nervous system development // traceable author statement /// 0008652 // cellular amino acid biosynthetic process // inferred from electronic annotation /// 0009086 // methionine biosynthetic process // inferred from electronic annotation /// 0032259 // methylation // traceable author statement /// 0032259 // methylation // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042558 // pteridine-containing compound metabolic process // inferred from electronic annotation /// 0044237 // cellular metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046653 // tetrahydrofolate metabolic process // inferred from electronic annotation /// 0050667 // homocysteine metabolic process // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0005542 // folic acid binding // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008705 // methionine synthase activity // inferred from electronic annotation /// 0008898 // homocysteine S-methyltransferase activity // inferred from electronic annotation /// 0016597 // amino acid binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0031419 // cobalamin binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:236958981-237061434 (+) // 99.81 // q43"]
["11723838_at",-0.12135267,-0.053447723,-0.019359112,0.021743298,0.048692226,0.019359112,0.3316891,0.03944915,-1.0678073,-0.09465134,1.0678073,"down","GATA6",2627.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0003148 // outflow tract septum morphogenesis // inferred from mutant phenotype /// 0003309 // type B pancreatic cell differentiation // inferred from electronic annotation /// 0003310 // pancreatic A cell differentiation // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0006366 // transcription from RNA polymerase II promoter // inferred from direct assay /// 0006366 // transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0006644 // phospholipid metabolic process // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007492 // endoderm development // inferred from electronic annotation /// 0007493 // endodermal cell fate determination // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008584 // male gonad development // inferred from expression pattern /// 0009636 // response to toxin // inferred from electronic annotation /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0030513 // positive regulation of BMP signaling pathway // inferred from electronic annotation /// 0030855 // epithelial cell differentiation // inferred from electronic annotation /// 0031016 // pancreas development // inferred from electronic annotation /// 0032911 // negative regulation of transforming growth factor beta1 production // inferred from mutant phenotype /// 0032912 // negative regulation of transforming growth factor beta2 production // inferred from mutant phenotype /// 0035239 // tube morphogenesis // inferred from electronic annotation /// 0042475 // odontogenesis of dentin-containing tooth // inferred from electronic annotation /// 0042493 // response to drug // inferred from mutant phenotype /// 0042493 // response to drug // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043627 // response to estrogen stimulus // inferred from electronic annotation /// 0045766 // positive regulation of angiogenesis // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048645 // organ formation // inferred from electronic annotation /// 0051145 // smooth muscle cell differentiation // inferred from mutant phenotype /// 0051591 // response to cAMP // inferred from electronic annotation /// 0051891 // positive regulation of cardioblast differentiation // inferred from electronic annotation /// 0055007 // cardiac muscle cell differentiation // inferred from electronic annotation /// 0060045 // positive regulation of cardiac muscle cell proliferation // inferred from electronic annotation /// 0060430 // lung saccule development // inferred from electronic annotation /// 0060486 // Clara cell differentiation // inferred from electronic annotation /// 0060510 // Type II pneumocyte differentiation // inferred from electronic annotation /// 0060575 // intestinal epithelial cell differentiation // inferred from direct assay /// 0060947 // cardiac vascular smooth muscle cell differentiation // inferred from mutant phenotype /// 0070848 // response to growth factor stimulus // inferred from direct assay /// 0071158 // positive regulation of cell cycle arrest // inferred from direct assay /// 0071371 // cellular response to gonadotropin stimulus // inferred from electronic annotation /// 0071456 // cellular response to hypoxia // inferred from direct assay /// 0071773 // cellular response to BMP stimulus // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation","0000981 // sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from mutant phenotype /// 0001103 // RNA polymerase II repressing transcription factor binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr18:19749403-19782491 (+) // 96.19 // q11.2"]
["11723398_at",-0.24806929,0.022278786,-0.08052015,0.064487934,-0.022278786,0.1326747,0.5335843,0.15154508,-1.1175956,-0.16039819,1.1175956,"down","NGFR",4804.0,"0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // traceable author statement /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007411 // axon guidance // inferred from electronic annotation /// 0007417 // central nervous system development // inferred from electronic annotation /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0009611 // response to wounding // inferred from electronic annotation /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0016048 // detection of temperature stimulus // inferred from electronic annotation /// 0021675 // nerve development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0031069 // hair follicle morphogenesis // inferred from electronic annotation /// 0031293 // membrane protein intracellular domain proteolysis // traceable author statement /// 0040037 // negative regulation of fibroblast growth factor receptor signaling pathway // inferred from electronic annotation /// 0042488 // positive regulation of odontogenesis of dentin-containing tooth // inferred from electronic annotation /// 0043588 // skin development // inferred from electronic annotation /// 0045786 // negative regulation of cell cycle // traceable author statement /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048146 // positive regulation of fibroblast proliferation // inferred from electronic annotation /// 0048635 // negative regulation of muscle organ development // inferred from electronic annotation /// 0050770 // regulation of axonogenesis // traceable author statement /// 0050771 // negative regulation of axonogenesis // traceable author statement /// 0050772 // positive regulation of axonogenesis // traceable author statement /// 0051799 // negative regulation of hair follicle development // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // traceable author statement /// 0004872 // receptor activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // traceable author statement /// 0005035 // death receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0048406 // nerve growth factor binding // inferred from electronic annotation","chr17:47572654-47592381 (+) // 94.49 // q21.33"]
["11740779_at",0.0,-0.016059875,-0.28344178,0.0,0.07051945,0.23533249,0.53833723,0.15520927,-1.1501201,-0.20178457,1.1501201,"down","KIAA1751",85452.0,"","","","chr1:1885740-1935276 (-) // 68.84 // p36.33"]
["11752365_at",-0.036023855,-0.09275627,0.065812826,0.2105813,-0.2991271,0.036024094,0.9947786,0.9833244,-1.0024164,-0.0034818833,1.0024164,"down","LOC442459",442459.0,"0006303 // double-strand break repair via nonhomologous end joining // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005958 // DNA-dependent protein kinase-DNA ligase 4 complex // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0004003 // ATP-dependent DNA helicase activity // inferred from electronic annotation","chrX:98716599-99194841 (-) // 96.9 // q22.1"]
["11720761_a_at",0.050195217,-0.0028476715,0.0028476715,-0.15011692,0.020848751,-0.004255295,0.6967909,0.33473328,1.0433618,0.061239496,1.0433618,"up","FBXO3",26273.0,"0006508 // proteolysis // traceable author statement /// 0016567 // protein ubiquitination // traceable author statement /// 0016567 // protein ubiquitination // non-traceable author statement","0000151 // ubiquitin ligase complex // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0004842 // ubiquitin-protein ligase activity // traceable author statement /// 0004842 // ubiquitin-protein ligase activity // non-traceable author statement","chr11:33762489-33796070 (-) // 95.12 // p13"]
["11741570_a_at",0.14554214,0.010827541,-0.010827541,0.06243086,-0.076839924,-0.05476141,0.69649255,0.33443695,1.0508603,0.07157087,1.0508603,"up","UBE2Q2",92912.0,"0016567 // protein ubiquitination // inferred from electronic annotation /// 0070936 // protein K48-linked ubiquitination // inferred from direct assay","0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation","chr15:76136076-76193388 (+) // 97.51 // q24.2"]
["11754482_a_at",0.026454926,-0.014400482,0.09753895,0.0022211075,-0.0022211075,-0.025302887,0.63449377,0.2541729,1.0316584,0.044965364,1.0316584,"up","PSMB1",5689.0,"0000075 // cell cycle checkpoint // traceable author statement /// 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000084 // S phase of mitotic cell cycle // traceable author statement /// 0000209 // protein polyubiquitination // traceable author statement /// 0000216 // M/G1 transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051603 // proteolysis involved in cellular protein catabolic process // inferred from electronic annotation","0000502 // proteasome complex // traceable author statement /// 0000502 // proteasome complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005839 // proteasome core complex // inferred from electronic annotation","0004175 // endopeptidase activity // inferred from electronic annotation /// 0004298 // threonine-type endopeptidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr6:170844207-170847665 (-) // 72.45 // q27"]
["11755868_x_at",0.039744377,0.049487114,0.055513382,-0.039744377,-0.07518816,-0.12791538,0.179878,0.0076811356,1.0936853,0.12919763,1.0936853,"up","CLCC1",23155.0,"0006821 // chloride transport // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0005254 // chloride channel activity // inferred from electronic annotation","chr1:109472560-109506072 (-) // 73.61 // p13.3"]
["11734332_a_at",0.035171032,-0.035171032,-0.09000206,-0.2085545,0.325922,0.22435808,0.7638884,0.43952775,-1.104895,-0.14390926,1.104895,"down","C12orf36",283422.0,"","","","chr12:13523714-13540101 (-) // 58.49 // p13.1"]
["11748087_a_at",0.08596134,0.01277113,0.03857708,-0.012770653,-0.107515335,-0.102108,0.30989364,0.03286934,1.0866604,0.11990112,1.0866604,"up","C10orf2",56652.0,"0006260 // DNA replication // inferred from electronic annotation /// 0006264 // mitochondrial DNA replication // inferred from mutant phenotype /// 0006264 // mitochondrial DNA replication // non-traceable author statement /// 0006264 // mitochondrial DNA replication // inferred from electronic annotation /// 0006268 // DNA unwinding involved in replication // inferred from electronic annotation /// 0006390 // transcription from mitochondrial promoter // inferred from mutant phenotype /// 0008219 // cell death // inferred from electronic annotation /// 0032508 // DNA duplex unwinding // inferred from electronic annotation /// 0034214 // protein hexamerization // inferred from direct assay /// 0051260 // protein homooligomerization // inferred from direct assay","0005739 // mitochondrion // inferred from mutant phenotype /// 0005739 // mitochondrion // non-traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0042645 // mitochondrial nucleoid // inferred from direct assay /// 0042645 // mitochondrial nucleoid // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0002020 // protease binding // inferred from physical interaction /// 0003678 // DNA helicase activity // inferred from electronic annotation /// 0003697 // single-stranded DNA binding // inferred from direct assay /// 0004386 // helicase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0043139 // 5'-3' DNA helicase activity // inferred from direct assay","chr10:102747782-102754157 (+) // 84.28 // q24.31"]
["11753354_a_at",-0.13818192,-0.014762163,0.059972048,0.014761925,-0.09986949,0.074401855,0.9094483,0.7402262,-1.0191894,-0.027422117,1.0191894,"down","DAOA",267012.0,"0043085 // positive regulation of catalytic activity // inferred from direct assay /// 1900758 // negative regulation of D-amino-acid oxidase activity // inferred from direct assay","0005739 // mitochondrion // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0008047 // enzyme activator activity // inferred from direct assay /// 0019899 // enzyme binding // inferred from physical interaction","chr13:106119457-106143349 (+) // 48.41 // q33.2"]
["11762815_at",0.009920597,-0.06934738,-0.009920597,-0.016429901,0.3021121,0.07556963,0.60296345,0.21534681,-1.1046069,-0.143533,1.1046069,"down","MFAP2",4237.0,"0030220 // platelet formation // inferred from electronic annotation","0001527 // microfibril // inferred from electronic annotation /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation","0001968 // fibronectin binding // inferred from electronic annotation /// 0070051 // fibrinogen binding // inferred from electronic annotation","chr1:17302190-17304812 (-) // 90.53 // p36.13"]
["11752641_a_at",0.11559582,-0.059306145,-0.055537224,0.055537224,-0.2471509,0.2796769,0.95687973,0.8671144,-1.0203779,-0.029103521,1.0203779,"down","PTK7",5754.0,"0001736 // establishment of planar polarity // inferred from electronic annotation /// 0001843 // neural tube closure // inferred from electronic annotation /// 0003401 // axis elongation // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0010976 // positive regulation of neuron projection development // inferred from mutant phenotype /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016477 // cell migration // inferred from mutant phenotype /// 0031532 // actin cytoskeleton reorganization // inferred from mutant phenotype /// 0045198 // establishment of epithelial cell apical/basal polarity // inferred from electronic annotation /// 0060026 // convergent extension // inferred from electronic annotation /// 0060070 // canonical Wnt receptor signaling pathway // inferred from mutant phenotype /// 0060484 // lung-associated mesenchyme development // inferred from electronic annotation /// 0071300 // cellular response to retinoic acid // inferred from mutant phenotype /// 0090103 // cochlea morphogenesis // inferred from electronic annotation","0005624 // membrane fraction // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0005911 // cell-cell junction // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr6:43044579-43109518 (+) // 99.71 // p21.1"]
["11759518_at",-0.14231658,0.031318903,0.03708005,-0.031318665,0.09631276,-0.27485776,0.9059287,0.73281026,1.0319088,0.0453154,1.0319088,"up","MACF1",23499.0,"0001707 // mesoderm formation // inferred from electronic annotation /// 0006200 // ATP catabolic process // inferred from sequence or structural similarity /// 0006620 // posttranslational protein targeting to membrane // inferred from electronic annotation /// 0006928 // cellular component movement // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0007163 // establishment or maintenance of cell polarity // inferred from electronic annotation /// 0010632 // regulation of epithelial cell migration // inferred from sequence or structural similarity /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0030177 // positive regulation of Wnt receptor signaling pathway // inferred from sequence or structural similarity /// 0032886 // regulation of microtubule-based process // inferred from mutant phenotype /// 0042060 // wound healing // inferred from sequence or structural similarity /// 0043001 // Golgi to plasma membrane protein transport // inferred from direct assay /// 0051893 // regulation of focal adhesion assembly // inferred from sequence or structural similarity","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005856 // cytoskeleton // non-traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0005874 // microtubule // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from direct assay /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0003779 // actin binding // inferred from direct assay /// 0003779 // actin binding // inferred from electronic annotation /// 0005509 // calcium ion binding // non-traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // non-traceable author statement /// 0008017 // microtubule binding // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051015 // actin filament binding // non-traceable author statement","chr1:39796809-39952810 (+) // 99.09 // p34.3"]
["11755358_a_at",0.08731985,-0.12451792,-0.035392284,0.035392284,0.15005589,-0.060578823,0.7923996,0.48897114,-1.0466796,-0.065819904,1.0466796,"down","CPSF1 /// MIR1234 /// MIR939","100126351 /// 100302196 /// 29894","0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006378 // mRNA polyadenylation // inferred from direct assay /// 0006379 // mRNA cleavage // inferred from direct assay /// 0006397 // mRNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0031124 // mRNA 3'-end processing // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005847 // mRNA cleavage and polyadenylation specificity factor complex // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003730 // mRNA 3'-UTR binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction","chr8:145625198-145634683 (-) // 62.4 // q24.3"]
["11761056_at",-0.26874518,-0.016196966,0.016196966,-0.15613341,0.11999774,0.023694277,0.8083261,0.5193555,-1.0610073,-0.085434526,1.0610073,"down","TPD52",7163.0,"0009653 // anatomical structure morphogenesis // traceable author statement /// 0030183 // B cell differentiation // inferred from expression pattern /// 0046903 // secretion // traceable author statement","0005737 // cytoplasm // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0005509 // calcium ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from direct assay","chr8:80831095-80993010 (-) // 92.91 // q21.13"]
["11746141_x_at",0.11468315,0.14877748,0.01657772,-0.1012702,-0.01657772,-0.14018822,0.29532152,0.029116148,1.13238,0.17935818,1.13238,"up","ARHGEF26",26084.0,"0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation","0001726 // ruffle // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation","chr3:153943573-153975616 (+) // 89.81 // q25.2"]
["11738991_a_at",-0.05727482,-0.031939983,0.031939983,0.12690067,0.03997326,-0.16488647,0.9467405,0.8378543,-1.0137867,-0.019754104,1.0137867,"down","ATP6V0E2",155066.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // traceable author statement /// 0007035 // vacuolar acidification // inferred from sequence or structural similarity /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0015991 // ATP hydrolysis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport // inferred from electronic annotation /// 0016049 // cell growth // inferred from genetic interaction /// 0033572 // transferrin transport // traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0005773 // vacuole // inferred from sequence or structural similarity /// 0010008 // endosome membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0033179 // proton-transporting V-type ATPase, V0 domain // inferred from electronic annotation","0015078 // hydrogen ion transmembrane transporter activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042625 // ATPase activity, coupled to transmembrane movement of ions // inferred from sequence or structural similarity","chr7:149570056-149578138 (+) // 96.41 // q36.1"]
["11748083_a_at",0.089615345,0.030642986,-0.14001846,-0.10016346,-0.019525051,0.019525051,0.9117992,0.7464251,1.0187508,0.026801173,1.0187508,"up","DNALI1",7802.0,"0006928 // cellular component movement // traceable author statement /// 0007338 // single fertilization // traceable author statement","0005737 // cytoplasm // inferred from direct assay /// 0005858 // axonemal dynein complex // traceable author statement /// 0005930 // axoneme // traceable author statement /// 0030286 // dynein complex // inferred from electronic annotation","0003774 // motor activity // inferred from electronic annotation /// 0003777 // microtubule motor activity // traceable author statement","chr1:38022579-38031234 (+) // 99.92 // p34.3"]
["11762260_x_at",0.18066359,-0.0053019524,0.0053019524,-0.11192703,0.11442709,-0.07574797,0.7472909,0.412165,1.060421,0.08463713,1.060421,"up","MST1",4485.0,"","0005576 // extracellular region // inferred from electronic annotation","0004252 // serine-type endopeptidase activity // inferred from electronic annotation","chr1:16972097-16974136 (+) // 97.46 // p36.13 /// chr1:17086323-17088751 (-) // 94.43 // p36.13 /// chr3:49724056-49726106 (-) // 97.36 // p21.31"]
["11758368_s_at",0.052951336,0.11164856,0.026845932,-0.026845932,-0.14276409,-0.07848406,0.27927098,0.02491078,1.1068912,0.14651336,1.1068912,"up","SGTA",6449.0,"0044419 // interspecies interaction between organisms // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr19:2754794-2755771 (-) // 98.03 // p13.3"]
["11732776_a_at",0.009022713,0.13714242,-0.035592556,0.17034006,-0.013501644,-0.009022713,0.9622385,0.8837104,-1.0086421,-0.012414317,1.0086421,"down","DNMT3A",1788.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006306 // DNA methylation // inferred from direct assay /// 0006306 // DNA methylation // inferred from electronic annotation /// 0006346 // methylation-dependent chromatin silencing // inferred from electronic annotation /// 0006349 // regulation of gene expression by genetic imprinting // traceable author statement /// 0006349 // regulation of gene expression by genetic imprinting // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation /// 0043045 // DNA methylation involved in embryo development // inferred from electronic annotation /// 0043046 // DNA methylation involved in gamete generation // inferred from electronic annotation /// 0044027 // hypermethylation of CpG island // inferred from electronic annotation /// 0071230 // cellular response to amino acid stimulus // inferred from electronic annotation /// 0090116 // C-5 methylation of cytosine // inferred from direct assay /// 0090116 // C-5 methylation of cytosine // inferred from electronic annotation","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000791 // euchromatin // inferred from direct assay /// 0000792 // heterochromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005720 // nuclear heterochromatin // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016363 // nuclear matrix // inferred from direct assay","0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003886 // DNA (cytosine-5-)-methyltransferase activity // inferred from direct assay /// 0003886 // DNA (cytosine-5-)-methyltransferase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:25504321-25565459 (-) // 75.0 // p23.3"]
["11741468_a_at",-0.02925849,-0.05120945,-0.15414381,0.15238166,0.02925849,0.03909087,0.3636982,0.051283795,-1.11094,-0.15178087,1.11094,"down","SOX6",55553.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0000902 // cell morphogenesis // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007517 // muscle organ development // non-traceable author statement /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0016458 // gene silencing // inferred from electronic annotation /// 0021778 // oligodendrocyte cell fate specification // inferred from electronic annotation /// 0030097 // hemopoiesis // inferred from electronic annotation /// 0032332 // positive regulation of chondrocyte differentiation // inferred from direct assay /// 0032332 // positive regulation of chondrocyte differentiation // inferred from electronic annotation /// 0035051 // cardiac cell differentiation // inferred from electronic annotation /// 0042692 // muscle cell differentiation // inferred from electronic annotation /// 0045165 // cell fate commitment // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0048709 // oligodendrocyte differentiation // inferred from electronic annotation /// 0048821 // erythrocyte development // inferred from electronic annotation /// 0051216 // cartilage development // inferred from electronic annotation /// 0061036 // positive regulation of cartilage development // inferred from direct assay /// 0071560 // cellular response to transforming growth factor beta stimulus // inferred from direct assay /// 2000741 // positive regulation of mesenchymal stem cell differentiation // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr11:15987994-16629310 (-) // 97.28 // p15.2"]
["11723934_a_at",-0.19905138,-0.0644145,0.0644145,0.21486187,0.15442085,-0.14187813,0.7065474,0.34833166,-1.10355,-0.14215194,1.10355,"down","PNMA3",29944.0,"0006915 // apoptotic process // non-traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chrX:152224765-152228822 (+) // 70.29 // q28"]
["11740428_at",-0.037017345,0.019696236,0.20684195,-0.24491882,0.04177189,-0.019696236,0.66707015,0.29478303,1.0999627,0.13745461,1.0999627,"up","PSAPL1",768239.0,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0006665 // sphingolipid metabolic process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation","","chr4:7432021-7436700 (-) // 89.78 // p16.1"]
["11718112_at",0.06239891,0.020959854,0.10169983,-0.039699554,-0.020959854,-0.050764084,0.24027552,0.016509669,1.0709027,0.098827414,1.0709027,"up","SF3A3",10946.0,"0000375 // RNA splicing, via transesterification reactions // traceable author statement /// 0000389 // nuclear mRNA 3'-splice site recognition // traceable author statement /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0006397 // mRNA processing // inferred from mutant phenotype /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006397 // mRNA processing // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from direct assay /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005681 // spliceosomal complex // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:38422646-38456593 (-) // 79.05 // p34.3"]
["11730907_a_at",-0.16670084,0.22527099,0.024906397,-0.1429913,0.1024487,-0.024906397,0.90422934,0.7289077,1.035008,0.049641855,1.035008,"up","ABCB1",5243.0,"0000086 // G2/M transition of mitotic cell cycle // inferred from direct assay /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0042493 // response to drug // traceable author statement /// 0055085 // transmembrane transport // not recorded /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0072089 // stem cell proliferation // inferred from mutant phenotype","0000139 // Golgi membrane // not recorded /// 0005624 // membrane fraction // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // not recorded /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0016324 // apical plasma membrane // not recorded /// 0046581 // intercellular canaliculus // not recorded","0000166 // nucleotide binding // inferred from electronic annotation /// 0005215 // transporter activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005524 // ATP binding // traceable author statement /// 0008559 // xenobiotic-transporting ATPase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0042626 // ATPase activity, coupled to transmembrane movement of substances // not recorded /// 0042626 // ATPase activity, coupled to transmembrane movement of substances // inferred from electronic annotation /// 0042626 // ATPase activity, coupled to transmembrane movement of substances // traceable author statement","chr7:87132339-87342727 (-) // 96.55 // q21.12"]
["11751992_x_at",0.062284946,0.15058947,-0.07349682,-0.14803791,-0.062284946,0.08897042,0.7474587,0.41256362,1.0620929,0.086909965,1.0620929,"up","MOV10L1",54456.0,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0007281 // germ cell development // inferred from expression pattern /// 0007283 // spermatogenesis // inferred from expression pattern","0005622 // intracellular // inferred by curator","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // traceable author statement /// 0003723 // RNA binding // traceable author statement /// 0004004 // ATP-dependent RNA helicase activity // non-traceable author statement /// 0004386 // helicase activity // inferred from electronic annotation /// 0005524 // ATP binding // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr22:50528684-50599943 (+) // 99.84 // q13.33"]
["11732243_at",0.15503597,0.010736942,-0.28870153,-0.025969028,-0.010736942,0.057038784,0.9085421,0.7379815,-1.0336543,-0.04775381,1.0336543,"down","APOL6",80830.0,"0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // non-traceable author statement /// 0006869 // lipid transport // inferred from electronic annotation /// 0042157 // lipoprotein metabolic process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation","0005319 // lipid transporter activity // non-traceable author statement /// 0008289 // lipid binding // inferred from electronic annotation","chr22:36044416-36064407 (+) // 18.3 // q12.3"]
["11733650_s_at",-0.0961802,0.10729122,-0.14909124,-0.103091,0.0961802,0.30000615,0.7157227,0.36325878,-1.1047285,-0.1436918,1.1047285,"down","FAM228B",375190.0,"","","","chr2:24346114-24392507 (+) // 92.33 // p23.3"]
["11739937_a_at",0.030225754,3.1757355E-4,-3.1805038E-4,-0.028782845,-0.007238388,0.0634594,0.99307215,0.9764858,1.0006442,9.29095E-4,1.0006442,"up","DYRK3",8444.0,"0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030218 // erythrocyte differentiation // inferred from direct assay /// 0030218 // erythrocyte differentiation // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from direct assay /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004712 // protein serine/threonine/tyrosine kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:206808880-206826770 (+) // 97.62 // q32.1"]
["11763892_at",0.020418167,-0.039571762,0.01167202,-0.01167202,-0.3189335,0.07338047,0.8130416,0.5280236,1.0594003,0.08324785,1.0594003,"up","SNORD17",692086.0,"","","","chr20:17942857-17943589 (-) // 60.21 // p11.23"]
["11758455_s_at",-0.018609524,-0.074025154,0.018609047,0.1274333,-0.023374557,0.08353329,0.55470234,0.17042375,-1.0623108,-0.08720594,1.0623108,"down","THAP6",152815.0,"","0015630 // microtubule cytoskeleton // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr4:76453493-76453969 (+) // 99.79 // q21.1"]
["11730538_a_at",-0.06320715,0.05157423,-0.10332966,0.04453802,0.03220558,-0.03220558,0.7170437,0.36568576,-1.03754,-0.0531669,1.03754,"down","ZSCAN10",84891.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016032 // viral reproduction // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from sequence or structural similarity /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from sequence or structural similarity /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:3138894-3149295 (-) // 96.07 // p13.3"]
["11723327_x_at",0.03631401,-0.026032448,-0.117694855,-0.025063515,0.10640621,0.025063038,0.6654356,0.29278907,-1.0506433,-0.071272984,1.0506433,"down","CA9",768.0,"0002009 // morphogenesis of an epithelium // inferred from electronic annotation /// 0006730 // one-carbon metabolic process // inferred from electronic annotation /// 0046903 // secretion // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0031528 // microvillus membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0004089 // carbonate dehydratase activity // inferred from electronic annotation /// 0004089 // carbonate dehydratase activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:35673852-35681156 (+) // 94.24 // p13.3"]
["11758803_at",-0.04717636,0.11496568,-0.021374464,0.021374702,0.08448315,-0.2306149,0.8597586,0.627106,1.0403416,0.05705734,1.0403416,"up","SSBP2",23635.0,"0006355 // regulation of transcription, DNA-dependent // non-traceable author statement","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003697 // single-stranded DNA binding // non-traceable author statement /// 0003697 // single-stranded DNA binding // inferred from electronic annotation","chr5:80714031-81047077 (-) // 90.3 // q14.1"]
["11721621_a_at",0.020897388,-0.020981789,0.111828804,0.0998044,-0.020897388,-0.24281502,0.76534843,0.44173133,1.0657611,0.09188407,1.0657611,"up","KATNAL1",84056.0,"","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008568 // microtubule-severing ATPase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation","chr13:30776629-30881653 (-) // 89.54 // q12.3"]
["11718885_a_at",-0.018505096,-0.127954,0.029427052,-0.059164524,0.018505096,0.050815582,0.7964562,0.4974046,-1.0298227,-0.042395987,1.0298227,"down","ARL5A",26225.0,"0007264 // small GTPase mediated signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation","chr2:152657492-152685043 (-) // 96.21 // q23.3"]
["11717993_at",0.012955189,-0.113360405,0.030097485,0.16846752,-0.023733616,-0.012955189,0.75947434,0.43120676,-1.0477991,-0.067362145,1.0477991,"down","CBX7",23492.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation","0000790 // nuclear chromatin // inferred from direct assay /// 0000792 // heterochromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0031519 // PcG protein complex // inferred from direct assay /// 0035102 // PRC1 complex // inferred from sequence or structural similarity /// 0035102 // PRC1 complex // inferred from electronic annotation","0003727 // single-stranded RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0035064 // methylated histone residue binding // inferred from electronic annotation","chr22:39526776-39548554 (-) // 94.0 // q13.1"]
["11724774_a_at",-0.010584354,0.010584354,0.014828205,-0.06866217,0.045737267,-0.09777737,0.718324,0.36741346,1.0318097,0.045176897,1.0318097,"up","GHDC",84514.0,"","0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation","","chr17:40340773-40346640 (-) // 83.8 // q21.2"]
["11737856_a_at",-0.0857687,0.014086723,-0.014086723,0.042827606,-0.19424915,0.18004513,0.9150325,0.7533584,-1.0267826,-0.038130797,1.0267826,"down","OPCML",4978.0,"0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0008038 // neuron recognition // traceable author statement /// 0038003 // opioid receptor signaling pathway // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0031225 // anchored to membrane // inferred from electronic annotation","0004985 // opioid receptor activity // traceable author statement","chr11:132284877-133402507 (-) // 95.91 // q25"]
["11749139_a_at",0.037858486,-0.10419226,0.019772053,0.08422756,-0.05317259,-0.01977253,0.92086774,0.76724994,-1.0134546,-0.019281399,1.0134546,"down","SEMA3C",10512.0,"0001755 // neural crest cell migration // inferred from electronic annotation /// 0001756 // somitogenesis // inferred from electronic annotation /// 0001974 // blood vessel remodeling // inferred from electronic annotation /// 0003151 // outflow tract morphogenesis // inferred from electronic annotation /// 0003215 // cardiac right ventricle morphogenesis // inferred from electronic annotation /// 0003350 // pulmonary myocardium development // inferred from electronic annotation /// 0006955 // immune response // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007411 // axon guidance // inferred from sequence or structural similarity /// 0007411 // axon guidance // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0021915 // neural tube development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0042493 // response to drug // traceable author statement /// 0060174 // limb bud formation // inferred from electronic annotation /// 0060666 // dichotomous subdivision of terminal units involved in salivary gland branching // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0030215 // semaphorin receptor binding // inferred from electronic annotation","chr7:80374183-80551675 (-) // 99.71 // q21.11"]
["11739115_s_at",0.18444729,0.048041344,-0.05227089,-0.048041344,-0.08912277,0.10369682,0.78550065,0.4741036,1.0506108,0.071228296,1.0506108,"up","TSPYL1",7259.0,"0006334 // nucleosome assembly // inferred from electronic annotation","0005622 // intracellular // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","","chr6:116596020-116601280 (-) // 81.52 // q22.1"]
["11718395_s_at",0.011407375,-0.06860399,0.081498146,-0.009569645,-0.13358736,0.009569168,0.76773936,0.44646853,1.0371537,0.052629735,1.0371537,"up","JUN",3725.0,"0001525 // angiogenesis // inferred from electronic annotation /// 0001774 // microglial cell activation // inferred from electronic annotation /// 0001836 // release of cytochrome c from mitochondria // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0001938 // positive regulation of endothelial cell proliferation // inferred from electronic annotation /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0003151 // outflow tract morphogenesis // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from direct assay /// 0007184 // SMAD protein import into nucleus // inferred from direct assay /// 0007568 // aging // inferred from electronic annotation /// 0007612 // learning // inferred from electronic annotation /// 0007623 // circadian rhythm // inferred from electronic annotation /// 0008063 // Toll signaling pathway // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0009314 // response to radiation // inferred from electronic annotation /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0009987 // cellular process // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0030224 // monocyte differentiation // inferred from electronic annotation /// 0031103 // axon regeneration // inferred from electronic annotation /// 0031953 // negative regulation of protein autophosphorylation // inferred from electronic annotation /// 0032321 // positive regulation of Rho GTPase activity // inferred from direct assay /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0034097 // response to cytokine stimulus // inferred from electronic annotation /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035026 // leading edge cell differentiation // inferred from electronic annotation /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0042493 // response to drug // inferred from electronic annotation /// 0042542 // response to hydrogen peroxide // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043392 // negative regulation of DNA binding // inferred from direct assay /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0043525 // positive regulation of neuron apoptotic process // inferred from electronic annotation /// 0043922 // negative regulation by host of viral transcription // inferred from direct assay /// 0043923 // positive regulation by host of viral transcription // inferred from direct assay /// 0045087 // innate immune response // traceable author statement /// 0045657 // positive regulation of monocyte differentiation // inferred from electronic annotation /// 0045740 // positive regulation of DNA replication // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred by curator /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048146 // positive regulation of fibroblast proliferation // inferred from electronic annotation /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from electronic annotation /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // traceable author statement /// 0051365 // cellular response to potassium ion starvation // inferred from electronic annotation /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0051591 // response to cAMP // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from electronic annotation /// 0051899 // membrane depolarization // inferred from electronic annotation /// 0060395 // SMAD protein signal transduction // inferred from direct assay /// 0071277 // cellular response to calcium ion // inferred from electronic annotation","0000228 // nuclear chromosome // traceable author statement /// 0000790 // nuclear chromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005719 // nuclear euchromatin // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0017053 // transcriptional repressor complex // inferred from electronic annotation","0000980 // RNA polymerase II distal enhancer sequence-specific DNA binding // inferred from direct assay /// 0001102 // RNA polymerase II activating transcription factor binding // inferred from physical interaction /// 0001190 // RNA polymerase II transcription factor binding transcription factor activity involved in positive regulation of transcription // inferred by curator /// 0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred by curator /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0005100 // Rho GTPase activator activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0035497 // cAMP response element binding // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation /// 0070412 // R-SMAD binding // inferred from physical interaction","chr1:59246365-59249997 (-) // 96.89 // p32.1"]
["11731882_a_at",-0.027269125,0.052699566,-0.16852641,0.027269125,-0.2167716,0.29445004,0.8631096,0.63498473,-1.0589843,-0.08268117,1.0589843,"down","ZNF540",163255.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:38089274-38104932 (+) // 73.73 // q13.12"]
["11721841_at",0.008922577,0.038093567,-0.32471514,-0.14097452,0.058133602,-0.008923054,0.8744735,0.65901154,-1.0438962,-0.061978262,1.0438962,"down","GLIPR1",11010.0,"0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr12:75874459-75895715 (+) // 91.08 // q21.2"]
["11747472_x_at",0.054843903,-0.10676718,0.0,0.0,0.07455444,-0.05915928,0.90589684,0.73253024,-1.0156754,-0.02243944,1.0156754,"down","PARPBP",55010.0,"0006281 // DNA repair // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 2000042 // negative regulation of double-strand break repair via homologous recombination // inferred from mutant phenotype","0000785 // chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr12:102513956-102590370 (+) // 100.0 // q23.2"]
["11756848_a_at",-0.02793622,-0.10987067,0.02793622,0.08252716,-0.037501574,0.19293118,0.59558785,0.2096745,-1.0836828,-0.1159425,1.0836828,"down","MCHR1",2847.0,"0006091 // generation of precursor metabolites and energy // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007193 // adenylate cyclase-inhibiting G-protein coupled receptor signaling pathway // traceable author statement /// 0007204 // elevation of cytosolic calcium ion concentration // inferred from electronic annotation /// 0007204 // elevation of cytosolic calcium ion concentration // traceable author statement /// 0007218 // neuropeptide signaling pathway // traceable author statement /// 0007218 // neuropeptide signaling pathway // inferred from electronic annotation /// 0007631 // feeding behavior // traceable author statement /// 0051928 // positive regulation of calcium ion transport // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031513 // nonmotile primary cilium // inferred from sequence or structural similarity /// 0031513 // nonmotile primary cilium // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0008022 // protein C-terminus binding // inferred from electronic annotation /// 0008188 // neuropeptide receptor activity // traceable author statement /// 0030273 // melanin-concentrating hormone receptor activity // inferred from electronic annotation /// 0042562 // hormone binding // inferred from electronic annotation","chr22:41076110-41078177 (+) // 100.0 // q13.2"]
["11752473_x_at",-0.031103611,-0.16631746,-0.13991117,0.3250184,0.031103611,0.17822504,0.32389602,0.037002638,-1.2231147,-0.29055974,1.2231147,"down","MED24",9862.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // inferred from direct assay /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016573 // histone acetylation // inferred from electronic annotation /// 0030518 // intracellular steroid hormone receptor signaling pathway // inferred from direct assay /// 0030521 // androgen receptor signaling pathway // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0051291 // protein heterooligomerization // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0016592 // mediator complex // non-traceable author statement /// 0016592 // mediator complex // inferred from electronic annotation","0001104 // RNA polymerase II transcription cofactor activity // inferred from direct assay /// 0003712 // transcription cofactor activity // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from electronic annotation /// 0004402 // histone acetyltransferase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from direct assay /// 0004872 // receptor activity // inferred from electronic annotation /// 0030374 // ligand-dependent nuclear receptor transcription coactivator activity // non-traceable author statement /// 0042809 // vitamin D receptor binding // non-traceable author statement /// 0046966 // thyroid hormone receptor binding // inferred from direct assay","chr17:38179384-38210661 (-) // 99.95 // q21.1"]
["11721248_s_at",0.19025946,0.06632376,-0.06770921,0.031804085,-0.031804085,-0.048695087,0.72008836,0.36968765,1.0564245,0.079189666,1.0564245,"up","GNG2",54331.0,"0006112 // energy reserve metabolic process // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007191 // adenylate cyclase-activating dopamine receptor signaling pathway // inferred from sequence or structural similarity /// 0007268 // synaptic transmission // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008283 // cell proliferation // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0071377 // cellular response to glucagon stimulus // traceable author statement /// 0071380 // cellular response to prostaglandin E stimulus // inferred from sequence or structural similarity /// 0071870 // cellular response to catecholamine stimulus // inferred from sequence or structural similarity","0005624 // membrane fraction // inferred from sequence or structural similarity /// 0005834 // heterotrimeric G-protein complex // inferred from sequence or structural similarity /// 0005834 // heterotrimeric G-protein complex // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation","chr14:52326839-52436513 (+) // 96.5 // q22.1"]
["11757021_x_at",-0.019327164,-0.0065784454,0.078606606,0.006579399,0.02232647,-0.02576828,0.87047976,0.6509905,1.0115174,0.016521145,1.0115174,"up","RPS24",6229.0,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0000462 // maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) // not recorded /// 0006364 // rRNA processing // inferred from mutant phenotype /// 0006412 // translation // inferred by curator /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral infectious cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0034101 // erythrocyte homeostasis // inferred from mutant phenotype /// 0042274 // ribosomal small subunit biogenesis // inferred from mutant phenotype /// 0044267 // cellular protein metabolic process // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // not recorded /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0015935 // small ribosomal subunit // inferred from direct assay /// 0015935 // small ribosomal subunit // inferred from sequence or structural similarity /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0031369 // translation initiation factor binding // inferred from sequence or structural similarity","chr10:79795104-79800459 (+) // 100.0 // q22.3"]
["11761861_at",-0.0031962395,-0.24440551,-0.09422636,0.15378976,0.042425632,0.0031962395,0.45362312,0.096951544,-1.1332084,-0.18041319,1.1332084,"down","ABHD14A-ACY1",1.0052676E8,"0008152 // metabolic process // inferred from electronic annotation","","0016787 // hydrolase activity // inferred from electronic annotation","chr3:52009075-52020905 (+) // 85.34 // p21.2"]
["11724837_at",-0.045908928,-0.096750736,-0.11795044,0.10728359,0.045909405,0.077560425,0.1449083,0.004131358,-1.1202245,-0.16378786,1.1202245,"down","NCEH1",57552.0,"0006470 // protein dephosphorylation // inferred from electronic annotation /// 0006805 // xenobiotic metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0016042 // lipid catabolic process // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004091 // carboxylesterase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0017171 // serine hydrolase activity // inferred from electronic annotation /// 0042301 // phosphate ion binding // inferred from electronic annotation","chr3:172348038-172429008 (-) // 97.27 // q26.31"]
["11727007_at",0.14953709,0.025866508,-0.025866032,-0.0863595,-0.13776064,0.03950405,0.5925665,0.20686743,1.0802644,0.111384526,1.0802644,"up","SORT1",6272.0,"0001503 // ossification // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006895 // Golgi to endosome transport // inferred from direct assay /// 0006897 // endocytosis // inferred from direct assay /// 0006897 // endocytosis // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from mutant phenotype /// 0007218 // neuropeptide signaling pathway // inferred from direct assay /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008333 // endosome to lysosome transport // inferred from direct assay /// 0008624 // induction of apoptosis by extracellular signals // inferred from mutant phenotype /// 0010468 // regulation of gene expression // inferred from mutant phenotype /// 0014902 // myotube differentiation // inferred from mutant phenotype /// 0014902 // myotube differentiation // inferred from electronic annotation /// 0016050 // vesicle organization // inferred from direct assay /// 0016050 // vesicle organization // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0032509 // endosome transport via multivesicular body sorting pathway // inferred from direct assay /// 0032868 // response to insulin stimulus // inferred from mutant phenotype /// 0032868 // response to insulin stimulus // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0046323 // glucose import // inferred from mutant phenotype /// 0046323 // glucose import // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // inferred from direct assay /// 0048011 // nerve growth factor receptor signaling pathway // inferred from mutant phenotype /// 0048227 // plasma membrane to endosome transport // inferred from direct assay /// 0051005 // negative regulation of lipoprotein lipase activity // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // non-traceable author statement /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from direct assay /// 0005792 // microsome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // non-traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005905 // coated pit // inferred from direct assay /// 0009986 // cell surface // inferred from direct assay /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from direct assay /// 0030136 // clathrin-coated vesicle // inferred from direct assay /// 0030140 // trans-Golgi network transport vesicle // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0004872 // receptor activity // inferred from electronic annotation /// 0010465 // nerve growth factor receptor activity // inferred from direct assay /// 0019899 // enzyme binding // inferred from physical interaction /// 0030379 // neurotensin receptor activity, non-G-protein coupled // inferred from direct assay /// 0048406 // nerve growth factor binding // inferred from physical interaction","chr1:109852192-109940540 (-) // 97.22 // p13.3"]
["11751204_s_at",-0.002556324,-0.12063384,0.030674458,-0.026108503,0.06755018,0.002556324,0.7662141,0.44390622,-1.032044,-0.045504555,1.032044,"down","GPM6A",2823.0,"0001764 // neuron migration // inferred from direct assay /// 0003407 // neural retina development // inferred from sequence or structural similarity /// 0007399 // nervous system development // inferred from electronic annotation /// 0007416 // synapse assembly // inferred from sequence or structural similarity /// 0048812 // neuron projection morphogenesis // inferred from sequence or structural similarity /// 0048863 // stem cell differentiation // inferred from direct assay /// 0051491 // positive regulation of filopodium assembly // inferred from sequence or structural similarity /// 0070588 // calcium ion transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030175 // filopodium // inferred from sequence or structural similarity /// 0030175 // filopodium // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043005 // neuron projection // inferred from sequence or structural similarity /// 0043025 // neuronal cell body // inferred from sequence or structural similarity /// 0043197 // dendritic spine // inferred from electronic annotation /// 0044295 // axonal growth cone // inferred from sequence or structural similarity","0005262 // calcium channel activity // inferred from electronic annotation","chr4:176555696-176708827 (-) // 88.95 // q34.2"]
["11725745_a_at",-0.036604404,-0.061980724,0.039577723,0.0073792934,-0.0073792934,0.02111268,0.7672226,0.4456865,-1.018684,-0.026706632,1.018684,"down","SORBS1",10580.0,"0006810 // transport // inferred from electronic annotation /// 0006936 // muscle contraction // traceable author statement /// 0007160 // cell-matrix adhesion // traceable author statement /// 0008286 // insulin receptor signaling pathway // inferred from sequence or structural similarity /// 0015758 // glucose transport // inferred from sequence or structural similarity /// 0032869 // cellular response to insulin stimulus // inferred from sequence or structural similarity /// 0043149 // stress fiber assembly // inferred from sequence or structural similarity /// 0045725 // positive regulation of glycogen biosynthetic process // inferred from sequence or structural similarity /// 0046326 // positive regulation of glucose import // inferred from sequence or structural similarity /// 0046889 // positive regulation of lipid biosynthetic process // inferred from sequence or structural similarity /// 0048041 // focal adhesion assembly // inferred from sequence or structural similarity /// 0090004 // positive regulation of establishment of protein localization in plasma membrane // inferred from sequence or structural similarity","0001725 // stress fiber // inferred from sequence or structural similarity /// 0001725 // stress fiber // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005899 // insulin receptor complex // inferred from direct assay /// 0005912 // adherens junction // inferred from electronic annotation /// 0005913 // cell-cell adherens junction // inferred from sequence or structural similarity /// 0005913 // cell-cell adherens junction // traceable author statement /// 0005915 // zonula adherens // traceable author statement /// 0005924 // cell-substrate adherens junction // inferred from sequence or structural similarity /// 0005925 // focal adhesion // inferred from direct assay /// 0005925 // focal adhesion // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0045121 // membrane raft // inferred from sequence or structural similarity","0003779 // actin binding // traceable author statement /// 0005070 // SH3/SH2 adaptor activity // inferred by curator /// 0005070 // SH3/SH2 adaptor activity // inferred from sequence or structural similarity /// 0005158 // insulin receptor binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008092 // cytoskeletal protein binding // traceable author statement /// 0019901 // protein kinase binding // inferred from electronic annotation","chr10:97071530-97321171 (-) // 98.14 // q24.1"]
["11746255_x_at",-0.0033226013,0.0033226013,0.09841633,-0.01150322,0.017227173,-0.018717766,0.703168,0.34414545,1.0260754,0.037136696,1.0260754,"up","VPS29",51699.0,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0004647 // phosphoserine phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016788 // hydrolase activity, acting on ester bonds // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:110929431-110936823 (-) // 96.13 // q24.11"]
["11748015_x_at",0.0472517,0.03209877,0.034748077,-0.059064865,-0.03209877,-0.045681,0.08459432,7.711638E-4,1.059694,0.083647795,1.059694,"up","VDAC3",7419.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006820 // anion transport // inferred from electronic annotation /// 0015853 // adenine transport // traceable author statement /// 0044070 // regulation of anion transport // traceable author statement /// 0044070 // regulation of anion transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0046930 // pore complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0008308 // voltage-gated anion channel activity // traceable author statement /// 0008308 // voltage-gated anion channel activity // inferred from electronic annotation /// 0015288 // porin activity // inferred from electronic annotation","chr8:42249345-42263204 (+) // 93.12 // p11.21"]
["11732300_at",-0.004251957,0.12404585,0.004251957,-0.07094526,-0.004251957,0.061972618,0.7785482,0.4631721,1.0322245,0.045756828,1.0322245,"up","KIAA1715",80856.0,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0007596 // blood coagulation // inferred from electronic annotation /// 0035115 // embryonic forelimb morphogenesis // inferred from electronic annotation /// 0042733 // embryonic digit morphogenesis // inferred from electronic annotation /// 0060173 // limb development // non-traceable author statement","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","","chr2:176788482-176867073 (-) // 65.74 // q31.1"]
["11718940_a_at",-0.068374634,-0.14719725,-0.081385136,0.068374634,0.1597147,0.12977266,0.14187962,0.0038530754,-1.1633402,-0.21827306,1.1633402,"down","TNFAIP3",7128.0,"0001922 // B-1 B cell homeostasis // inferred from electronic annotation /// 0001922 // B-1 B cell homeostasis // inferred from sequence or structural similarity /// 0002237 // response to molecule of bacterial origin // inferred from direct assay /// 0002237 // response to molecule of bacterial origin // inferred from electronic annotation /// 0002634 // regulation of germinal center formation // inferred from electronic annotation /// 0002634 // regulation of germinal center formation // inferred from sequence or structural similarity /// 0006508 // proteolysis // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from direct assay /// 0006916 // anti-apoptosis // non-traceable author statement /// 0006954 // inflammatory response // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0016579 // protein deubiquitination // inferred from electronic annotation /// 0016579 // protein deubiquitination // traceable author statement /// 0031397 // negative regulation of protein ubiquitination // inferred from direct assay /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0032480 // negative regulation of type I interferon production // traceable author statement /// 0032495 // response to muramyl dipeptide // inferred from electronic annotation /// 0032691 // negative regulation of interleukin-1 beta production // inferred from electronic annotation /// 0032703 // negative regulation of interleukin-2 production // inferred from mutant phenotype /// 0032715 // negative regulation of interleukin-6 production // inferred from electronic annotation /// 0032715 // negative regulation of interleukin-6 production // inferred from sequence or structural similarity /// 0032720 // negative regulation of tumor necrosis factor production // inferred from electronic annotation /// 0032720 // negative regulation of tumor necrosis factor production // inferred from sequence or structural similarity /// 0034136 // negative regulation of toll-like receptor 2 signaling pathway // non-traceable author statement /// 0034140 // negative regulation of toll-like receptor 3 signaling pathway // inferred from direct assay /// 0034144 // negative regulation of toll-like receptor 4 signaling pathway // non-traceable author statement /// 0034148 // negative regulation of toll-like receptor 5 signaling pathway // inferred from electronic annotation /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0043124 // negative regulation of I-kappaB kinase/NF-kappaB cascade // inferred from direct assay /// 0043124 // negative regulation of I-kappaB kinase/NF-kappaB cascade // inferred from electronic annotation /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // non-traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045732 // positive regulation of protein catabolic process // inferred from direct assay /// 0045736 // negative regulation of cyclin-dependent protein kinase activity // inferred from electronic annotation /// 0045779 // negative regulation of bone resorption // non-traceable author statement /// 0048662 // negative regulation of smooth muscle cell proliferation // inferred from direct assay /// 0050691 // regulation of defense response to virus by host // non-traceable author statement /// 0050728 // negative regulation of inflammatory response // inferred from electronic annotation /// 0050728 // negative regulation of inflammatory response // inferred from sequence or structural similarity /// 0050869 // negative regulation of B cell activation // inferred from electronic annotation /// 0050869 // negative regulation of B cell activation // inferred from sequence or structural similarity /// 0051259 // protein oligomerization // non-traceable author statement /// 0060548 // negative regulation of cell death // inferred from electronic annotation /// 0061043 // regulation of vascular wound healing // non-traceable author statement /// 0070423 // nucleotide-binding oligomerization domain containing signaling pathway // traceable author statement /// 0070429 // negative regulation of nucleotide-binding oligomerization domain containing 1 signaling pathway // inferred from electronic annotation /// 0070433 // negative regulation of nucleotide-binding oligomerization domain containing 2 signaling pathway // inferred from electronic annotation /// 0070536 // protein K63-linked deubiquitination // inferred from direct assay /// 0070936 // protein K48-linked ubiquitination // inferred from direct assay /// 0071222 // cellular response to lipopolysaccharide // inferred from direct assay /// 0072573 // tolerance induction to lipopolysaccharide // inferred from mutant phenotype /// 0090291 // negative regulation of osteoclast proliferation // non-traceable author statement /// 2000347 // positive regulation of hepatocyte proliferation // inferred from electronic annotation /// 2000349 // negative regulation of CD40 signaling pathway // inferred from mutant phenotype /// 2000352 // negative regulation of endothelial cell apoptotic process // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005829 // cytosol // traceable author statement","0002020 // protease binding // inferred from physical interaction /// 0003677 // DNA binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004221 // ubiquitin thiolesterase activity // inferred from mutant phenotype /// 0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0004843 // ubiquitin-specific protease activity // inferred from direct assay /// 0004843 // ubiquitin-specific protease activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0019900 // kinase binding // inferred from electronic annotation /// 0043027 // cysteine-type endopeptidase inhibitor activity involved in apoptotic process // non-traceable author statement /// 0043130 // ubiquitin binding // inferred from physical interaction /// 0043621 // protein self-association // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:138188723-138204449 (+) // 97.13 // q23.3"]
["11720628_s_at",0.04353237,0.003066063,-0.0067386627,-0.003066063,-0.0051908493,0.04720497,0.996636,0.99009866,1.0002106,3.0386134E-4,1.0002106,"up","ATP6V1D",51382.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0015991 // ATP hydrolysis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport // inferred from electronic annotation /// 0033572 // transferrin transport // traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016471 // vacuolar proton-transporting V-type ATPase complex // inferred from direct assay /// 0033178 // proton-transporting two-sector ATPase complex, catalytic domain // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0042626 // ATPase activity, coupled to transmembrane movement of substances // inferred from electronic annotation /// 0046961 // proton-transporting ATPase activity, rotational mechanism // inferred from electronic annotation","chr14:67778831-67826966 (-) // 91.66 // q23.3"]
["11746799_a_at",0.06829071,0.093174934,0.07291126,-0.07268715,-0.06829071,-0.06980133,0.044616908,4.3847012E-5,1.1083283,0.14838535,1.1083283,"up","PTPLAD1",51495.0,"0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0007249 // I-kappaB kinase/NF-kappaB cascade // inferred from electronic annotation /// 0007249 // I-kappaB kinase/NF-kappaB cascade // traceable author statement /// 0007254 // JNK cascade // inferred from electronic annotation /// 0007257 // activation of JUN kinase activity // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007266 // Rho protein signal transduction // inferred from electronic annotation /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0016601 // Rac protein signal transduction // non-traceable author statement /// 0043547 // positive regulation of GTPase activity // traceable author statement","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005096 // GTPase activator activity // traceable author statement /// 0016829 // lyase activity // inferred from electronic annotation","chr15:65822819-65868975 (+) // 99.92 // q22.31"]
["11758842_at",0.05311966,-0.05311966,0.08946514,0.28199005,-0.25392008,-0.09411001,0.9213586,0.76844454,1.0365826,0.051835068,1.0365826,"up","THBS1",7057.0,"0000187 // activation of MAPK activity // inferred from mutant phenotype /// 0001666 // response to hypoxia // non-traceable author statement /// 0001937 // negative regulation of endothelial cell proliferation // inferred from direct assay /// 0001937 // negative regulation of endothelial cell proliferation // inferred from mutant phenotype /// 0001953 // negative regulation of cell-matrix adhesion // inferred from direct assay /// 0002040 // sprouting angiogenesis // inferred from mutant phenotype /// 0002544 // chronic inflammatory response // inferred from expression pattern /// 0002576 // platelet degranulation // traceable author statement /// 0002581 // negative regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II // inferred from direct assay /// 0002605 // negative regulation of dendritic cell antigen processing and presentation // inferred from direct assay /// 0003417 // growth plate cartilage development // inferred from electronic annotation /// 0006916 // anti-apoptosis // traceable author statement /// 0006917 // induction of apoptosis // inferred from direct assay /// 0006954 // inflammatory response // inferred from electronic annotation /// 0006955 // immune response // inferred from expression pattern /// 0007050 // cell cycle arrest // inferred from direct assay /// 0007155 // cell adhesion // non-traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0009749 // response to glucose stimulus // inferred from direct assay /// 0010595 // positive regulation of endothelial cell migration // inferred from direct assay /// 0010596 // negative regulation of endothelial cell migration // inferred from direct assay /// 0010748 // negative regulation of plasma membrane long-chain fatty acid transport // inferred from direct assay /// 0010751 // negative regulation of nitric oxide mediated signal transduction // inferred from direct assay /// 0010754 // negative regulation of cGMP-mediated signaling // inferred from direct assay /// 0010757 // negative regulation of plasminogen activation // inferred from direct assay /// 0010759 // positive regulation of macrophage chemotaxis // inferred from sequence or structural similarity /// 0010763 // positive regulation of fibroblast migration // inferred from direct assay /// 0010811 // positive regulation of cell-substrate adhesion // inferred from electronic annotation /// 0016477 // cell migration // inferred from direct assay /// 0016525 // negative regulation of angiogenesis // inferred from direct assay /// 0016525 // negative regulation of angiogenesis // inferred from electronic annotation /// 0018149 // peptide cross-linking // inferred from direct assay /// 0030168 // platelet activation // traceable author statement /// 0030194 // positive regulation of blood coagulation // inferred from direct assay /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0030335 // positive regulation of cell migration // inferred from mutant phenotype /// 0030511 // positive regulation of transforming growth factor beta receptor signaling pathway // inferred from direct assay /// 0032026 // response to magnesium ion // inferred from direct assay /// 0032570 // response to progesterone stimulus // traceable author statement /// 0032695 // negative regulation of interleukin-12 production // inferred from direct assay /// 0032914 // positive regulation of transforming growth factor beta1 production // inferred from sequence or structural similarity /// 0034605 // cellular response to heat // non-traceable author statement /// 0040037 // negative regulation of fibroblast growth factor receptor signaling pathway // inferred from direct assay /// 0042327 // positive regulation of phosphorylation // inferred from mutant phenotype /// 0042493 // response to drug // inferred from expression pattern /// 0042535 // positive regulation of tumor necrosis factor biosynthetic process // inferred from direct assay /// 0043032 // positive regulation of macrophage activation // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0043536 // positive regulation of blood vessel endothelial cell migration // inferred from direct assay /// 0043537 // negative regulation of blood vessel endothelial cell migration // inferred from direct assay /// 0043652 // engulfment of apoptotic cell // inferred from direct assay /// 0045727 // positive regulation of translation // inferred from direct assay /// 0045766 // positive regulation of angiogenesis // inferred from mutant phenotype /// 0050921 // positive regulation of chemotaxis // inferred from direct assay /// 0051592 // response to calcium ion // inferred from direct assay /// 0051895 // negative regulation of focal adhesion assembly // traceable author statement /// 0051897 // positive regulation of protein kinase B signaling cascade // inferred from direct assay /// 0051918 // negative regulation of fibrinolysis // inferred from direct assay /// 2000379 // positive regulation of reactive oxygen species metabolic process // inferred from direct assay","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005577 // fibrinogen complex // inferred from direct assay /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0009897 // external side of plasma membrane // inferred from direct assay /// 0030141 // secretory granule // inferred from direct assay /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from sequence or structural similarity /// 0031012 // extracellular matrix // traceable author statement /// 0031091 // platelet alpha granule // inferred from direct assay /// 0031093 // platelet alpha granule lumen // traceable author statement","0001786 // phosphatidylserine binding // inferred from direct assay /// 0001948 // glycoprotein binding // non-traceable author statement /// 0001968 // fibronectin binding // inferred from direct assay /// 0005178 // integrin binding // inferred from mutant phenotype /// 0005509 // calcium ion binding // non-traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008201 // heparin binding // inferred from direct assay /// 0008201 // heparin binding // inferred from electronic annotation /// 0017134 // fibroblast growth factor binding // inferred from direct assay /// 0030169 // low-density lipoprotein particle binding // inferred from direct assay /// 0042802 // identical protein binding // non-traceable author statement /// 0043236 // laminin binding // inferred from direct assay /// 0043394 // proteoglycan binding // traceable author statement /// 0043499 // eukaryotic cell surface binding // inferred from direct assay /// 0050431 // transforming growth factor beta binding // inferred from sequence or structural similarity /// 0050431 // transforming growth factor beta binding // traceable author statement /// 0050840 // extracellular matrix binding // inferred from electronic annotation /// 0070051 // fibrinogen binding // inferred from direct assay /// 0070052 // collagen V binding // inferred from direct assay","chr15:39873133-39891116 (+) // 96.06 // q14"]
["11749988_x_at",-0.0026979446,-0.069411755,-0.09154892,0.042655945,0.0033836365,0.0026979446,0.41874132,0.07627585,-1.050298,-0.07079869,1.050298,"down","AUH",549.0,"0006402 // mRNA catabolic process // inferred from direct assay /// 0006552 // leucine catabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009083 // branched chain family amino acid catabolic process // traceable author statement /// 0009083 // branched chain family amino acid catabolic process // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement","0003723 // RNA binding // inferred from electronic annotation /// 0003730 // mRNA 3'-UTR binding // inferred from direct assay /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004300 // enoyl-CoA hydratase activity // inferred from direct assay /// 0004300 // enoyl-CoA hydratase activity // inferred from electronic annotation /// 0004490 // methylglutaconyl-CoA hydratase activity // not recorded /// 0004490 // methylglutaconyl-CoA hydratase activity // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation","chr9:94058302-94124177 (-) // 58.46 // q22.31"]
["11763356_at",-0.0056726933,0.04086256,0.1222496,-0.039594173,-0.057748318,0.0056726933,0.48881802,0.11836219,1.0592451,0.08303647,1.0592451,"up","LOC157503",157503.0,"","","","chr8:56449430-56454699 (+) // 97.0 // q12.1"]
["11741109_a_at",0.10194397,0.029205322,-0.020272732,-0.0045514107,-0.011873722,0.004550934,0.68364733,0.31694332,1.0287675,0.040916923,1.0287675,"up","ZNF57",126295.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:2900895-2918467 (+) // 92.9 // p13.3"]
["11757962_s_at",0.018981934,-0.094124794,0.14507294,-0.035600662,0.16396523,-0.018981934,0.96596205,0.8956392,-1.0091572,-0.013150898,1.0091572,"down","SRSF3",6428.0,"0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0031124 // mRNA 3'-end processing // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0016607 // nuclear speck // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0043274 // phospholipase binding // inferred from electronic annotation","chr6:36570879-36571208 (+) // 99.7 // p21.31"]
["11733898_x_at",0.0013389587,0.07690954,0.019765377,-0.0013389587,-0.09057665,-0.10371208,0.40264347,0.06786553,1.0702001,0.09788055,1.0702001,"up","TROVE2",6738.0,"0006383 // transcription from RNA polymerase III promoter // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // traceable author statement","0003723 // RNA binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement","chr1:193028767-193055443 (+) // 97.73 // q31.2"]
["11743011_a_at",-0.039504528,-0.05108261,-0.14756536,0.039504528,0.07204008,0.12097025,0.25631285,0.019642135,-1.1148806,-0.15688916,1.1148806,"down","GPR137B",7107.0,"","0005624 // membrane fraction // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation","chr1:236305709-236372207 (+) // 93.52 // q42.3"]
["11743232_a_at",-0.05027151,0.28209782,0.026892662,-0.026892662,-0.15091181,0.089040756,0.73714924,0.396207,1.0835965,0.1158276,1.0835965,"up","MLLT4",4301.0,"0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0034329 // cell junction assembly // traceable author statement /// 0034332 // adherens junction organization // traceable author statement /// 0045216 // cell-cell junction organization // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005911 // cell-cell junction // traceable author statement /// 0005912 // adherens junction // inferred from electronic annotation /// 0030054 // cell junction // inferred from direct assay /// 0030054 // cell junction // inferred from electronic annotation","0008022 // protein C-terminus binding // traceable author statement","chr6:168227670-168369878 (+) // 94.59 // q27"]
["11724548_a_at",0.0025920868,0.030039787,0.10756111,-0.040732384,-0.05501032,-0.0025920868,0.43558517,0.08623728,1.0566585,0.0795092,1.0566585,"up","RSBN1",54665.0,"","0005634 // nucleus // inferred from electronic annotation","","chr1:114304453-114355183 (-) // 98.0 // p13.2"]
["11754793_a_at",0.05485058,-0.0964365,-0.037620544,0.07400322,0.007587433,-0.007587433,0.72052205,0.3704438,-1.0360329,-0.051069837,1.0360329,"down","RRP12",23223.0,"","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation","","chr10:99116114-99127133 (-) // 95.57 // q24.1"]
["11730233_s_at",0.13757658,0.038665056,-0.1242435,-0.042914152,-0.038665056,0.082914114,0.95206434,0.8551613,1.0117744,0.01688767,1.0117744,"up","CTNND2",1501.0,"0001763 // morphogenesis of a branching structure // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007158 // neuron cell-cell adhesion // non-traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007612 // learning // inferred from electronic annotation /// 0048167 // regulation of synaptic plasticity // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005912 // adherens junction // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0043204 // perikaryon // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr5:10971955-11904155 (-) // 94.48 // p15.2"]
["11741482_a_at",0.14279795,-0.023566246,-0.2110033,-0.023566246,0.04108715,0.023566246,0.88803524,0.6921494,-1.0311729,-0.044286214,1.0311729,"down","CLCN5",1184.0,"0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006821 // chloride transport // traceable author statement /// 0006821 // chloride transport // inferred from electronic annotation /// 0006897 // endocytosis // inferred from electronic annotation /// 0007588 // excretion // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from direct assay /// 0045177 // apical part of cell // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005247 // voltage-gated chloride channel activity // inferred from electronic annotation /// 0005254 // chloride channel activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0015297 // antiporter activity // inferred from electronic annotation","chrX:49832214-49863892 (+) // 92.74 // p11.22"]
["11725236_at",-0.105017185,0.049612522,0.009610176,0.028421879,-0.10548401,-0.009610176,0.9453486,0.8344784,1.0094895,0.013625956,1.0094895,"up","ZBTB39",9880.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:57392616-57400301 (-) // 97.27 // q13.3"]
["11739287_at",0.14715672,0.066458225,0.0027017593,-0.022912025,-0.045004368,-0.0027022362,0.44653964,0.09301632,1.0685431,0.09564507,1.0685431,"up","MLL",4297.0,"0006306 // DNA methylation // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006461 // protein complex assembly // inferred from direct assay /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation /// 0032411 // positive regulation of transporter activity // inferred from mutant phenotype /// 0035162 // embryonic hemopoiesis // traceable author statement /// 0035162 // embryonic hemopoiesis // inferred from electronic annotation /// 0043984 // histone H4-K16 acetylation // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0051568 // histone H3-K4 methylation // inferred from direct assay /// 0051568 // histone H3-K4 methylation // inferred from mutant phenotype /// 0051568 // histone H3-K4 methylation // inferred from electronic annotation /// 0051569 // regulation of histone H3-K4 methylation // inferred from electronic annotation /// 0080182 // histone H3-K4 trimethylation // inferred from direct assay /// 2001040 // positive regulation of cellular response to drug // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0035097 // histone methyltransferase complex // inferred from direct assay /// 0035097 // histone methyltransferase complex // inferred from electronic annotation /// 0044428 // nuclear part // inferred from electronic annotation /// 0071339 // MLL1 complex // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003680 // AT DNA binding // non-traceable author statement /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0018024 // histone-lysine N-methyltransferase activity // inferred from electronic annotation /// 0042800 // histone methyltransferase activity (H3-K4 specific) // inferred from direct assay /// 0042800 // histone methyltransferase activity (H3-K4 specific) // inferred from mutant phenotype /// 0042800 // histone methyltransferase activity (H3-K4 specific) // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0045322 // unmethylated CpG binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070577 // histone acetyl-lysine binding // inferred from direct assay","chr11:118307204-118397546 (+) // 98.0 // q23.3"]
["11741235_a_at",2.1886826E-4,0.022249699,-2.193451E-4,-0.024000645,0.124825,-0.0370574,0.93517274,0.80492264,-1.0096388,-0.013839239,1.0096388,"down","JKAMP",51528.0,"0006986 // response to unfolded protein // inferred from electronic annotation /// 0030433 // ER-associated protein catabolic process // inferred from direct assay","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0031625 // ubiquitin protein ligase binding // inferred from physical interaction","chr14:59951160-59972080 (+) // 94.32 // q23.1"]
["11744622_x_at",-0.0013122559,0.019554138,0.03516674,-0.010591507,-0.11586285,0.0013122559,0.58512956,0.19892865,1.0421168,0.05951693,1.0421168,"up","STK25",10494.0,"0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006979 // response to oxidative stress // traceable author statement /// 0007163 // establishment or maintenance of cell polarity // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0050772 // positive regulation of axonogenesis // inferred from electronic annotation /// 0051645 // Golgi localization // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:242434433-242448107 (-) // 94.98 // q37.3"]
["11725049_s_at",0.08277798,0.017642021,0.17549992,-0.09411812,-0.17335033,-0.017642021,0.342658,0.043499842,1.138402,0.18701008,1.138402,"up","ARHGDIA",396.0,"0006916 // anti-apoptosis // traceable author statement /// 0006928 // cellular component movement // traceable author statement /// 0007162 // negative regulation of cell adhesion // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007266 // Rho protein signal transduction // inferred from electronic annotation /// 0007266 // Rho protein signal transduction // traceable author statement /// 0032880 // regulation of protein localization // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0050770 // regulation of axonogenesis // traceable author statement /// 0050771 // negative regulation of axonogenesis // traceable author statement /// 0050772 // positive regulation of axonogenesis // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0001772 // immunological synapse // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // traceable author statement","0005094 // Rho GDP-dissociation inhibitor activity // inferred from electronic annotation /// 0005094 // Rho GDP-dissociation inhibitor activity // traceable author statement /// 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr17:79825597-79827833 (-) // 91.49 // q25.3"]
["11749229_a_at",-0.044132233,0.032482147,-0.128788,0.02960682,-0.02960682,0.090865135,0.6350585,0.2553605,-1.0548962,-0.0771011,1.0548962,"down","SIRT5",23408.0,"0006342 // chromatin silencing // traceable author statement /// 0006471 // protein ADP-ribosylation // traceable author statement /// 0006476 // protein deacetylation // inferred from direct assay /// 0036047 // peptidyl-lysine demalonylation // inferred from direct assay /// 0036047 // peptidyl-lysine demalonylation // inferred from electronic annotation /// 0036049 // peptidyl-lysine desuccinylation // inferred from direct assay /// 0036049 // peptidyl-lysine desuccinylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005758 // mitochondrial intermembrane space // inferred from direct assay /// 0005758 // mitochondrial intermembrane space // inferred from electronic annotation /// 0005759 // mitochondrial matrix // inferred from direct assay /// 0005759 // mitochondrial matrix // inferred from electronic annotation","0003950 // NAD+ ADP-ribosyltransferase activity // traceable author statement /// 0008270 // zinc ion binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0036054 // protein-malonyllysine demalonylase activity // inferred from direct assay /// 0036054 // protein-malonyllysine demalonylase activity // inferred from electronic annotation /// 0036055 // protein-succinyllysine desuccinylase activity // inferred from direct assay /// 0036055 // protein-succinyllysine desuccinylase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070403 // NAD+ binding // inferred from direct assay /// 0070403 // NAD+ binding // inferred from electronic annotation","chr6:13579681-13612524 (+) // 94.81 // p23"]
["11742569_s_at",-0.05445981,-0.09163666,-0.012907505,0.06746817,0.40313196,0.012907505,0.5433703,0.15947443,-1.1600368,-0.21417058,1.1600368,"down","OR5M1 /// OR5M10","390167 /// 390168","0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr11:56380030-56380978 (-) // 100.0 // q12.1 /// chr11:56344249-56345197 (-) // 97.15 // q12.1"]
["11716998_a_at",-0.0040416718,0.05857134,0.004041195,-0.020114422,0.09077406,-0.012804508,0.99854743,0.99561983,1.0001653,2.3852021E-4,1.0001653,"up","RHBDD3",25807.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004252 // serine-type endopeptidase activity // inferred from electronic annotation","chr22:29655860-29663960 (-) // 91.71 // q12.2"]
["11736111_a_at",-0.02152872,0.1363225,0.02152872,-0.13271189,-0.0885272,0.050633907,0.6167138,0.23158087,1.0734904,0.102309264,1.0734904,"up","ARHGAP18",93663.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0005096 // GTPase activator activity // inferred from electronic annotation","chr6:129897289-130031370 (-) // 94.65 // q22.33"]
["11724771_x_at",-0.014585018,0.039832115,-0.066687584,-0.17227793,0.11180377,0.014585018,0.9959924,0.98748326,1.0010284,0.0014829319,1.0010284,"up","FCGR2A",2212.0,"","0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0019864 // IgG binding // inferred from electronic annotation","chr1:161475204-161489617 (+) // 73.63 // q23.3"]
["11724793_s_at",-0.004084587,-0.067536354,0.009510994,-0.06069565,0.036655426,0.004084587,0.9023031,0.72467965,-1.0097873,-0.014051468,1.0097873,"down","PGS1",9489.0,"0006655 // phosphatidylglycerol biosynthetic process // inferred from sequence or structural similarity /// 0006655 // phosphatidylglycerol biosynthetic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008654 // phospholipid biosynthetic process // inferred from electronic annotation /// 0032049 // cardiolipin biosynthetic process // inferred from sequence or structural similarity /// 0046339 // diacylglycerol metabolic process // inferred from sequence or structural similarity","0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from sequence or structural similarity /// 0005524 // ATP binding // inferred from electronic annotation /// 0008444 // CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity // inferred from sequence or structural similarity /// 0008444 // CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016780 // phosphotransferase activity, for other substituted phosphate groups // inferred from electronic annotation","chr17:76374698-76420739 (+) // 97.62 // q25.3"]
["11749615_x_at",0.020032883,-0.040115356,0.05268097,0.012788773,-0.06653309,-0.012788773,0.74518746,0.4087922,1.0231686,0.033043843,1.0231686,"up","UBE2I",7329.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006464 // cellular protein modification process // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007059 // chromosome segregation // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0010469 // regulation of receptor activity // inferred from electronic annotation /// 0016567 // protein ubiquitination // traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0016925 // protein sumoylation // inferred from direct assay /// 0016925 // protein sumoylation // inferred from electronic annotation /// 0033145 // positive regulation of intracellular steroid hormone receptor signaling pathway // inferred from electronic annotation /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0000795 // synaptonemal complex // traceable author statement /// 0001650 // fibrillar center // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016604 // nuclear body // inferred from electronic annotation /// 0016605 // PML body // inferred from direct assay /// 0030425 // dendrite // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein ligase activity // traceable author statement /// 0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008022 // protein C-terminus binding // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from physical interaction /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation /// 0019789 // SUMO ligase activity // inferred from direct assay /// 0019789 // SUMO ligase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0043398 // HLH domain binding // inferred from electronic annotation /// 0043425 // bHLH transcription factor binding // inferred from electronic annotation","chr16:1364031-1371295 (+) // 96.07 // p13.3"]
["11715771_a_at",-0.030838966,-0.015234947,0.08094406,0.015234947,0.055950165,-0.019554138,0.9667835,0.8986908,-1.00388,-0.00558686,1.00388,"down","LOC100506980 /// MRPL13","100506980 /// 28998","0006412 // translation // non-traceable author statement /// 0006412 // translation // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005761 // mitochondrial ribosome // inferred from direct assay /// 0005762 // mitochondrial large ribosomal subunit // inferred from direct assay /// 0005762 // mitochondrial large ribosomal subunit // non-traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003735 // structural constituent of ribosome // non-traceable author statement /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr8:121408082-121457647 (-) // 93.14 // q24.12"]
["11759864_at",-0.028235674,0.0295465,0.028235674,-0.11814737,-0.28740406,0.03316927,0.6149142,0.22935818,1.0973139,0.13397627,1.0973139,"up","ZNF609",23060.0,"","0005634 // nucleus // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation","chr15:64791490-64795257 (+) // 88.91 // q22.31"]
["11729496_at",0.47901535,0.026236534,0.011793137,-0.25359488,-0.023179054,-0.011793137,0.5804667,0.19438504,1.2045859,0.26853728,1.2045859,"up","FAM133A",286499.0,"","","","chrX:92929011-92967264 (+) // 85.82 // q21.32"]
["11744344_x_at",-0.024095535,0.006372452,0.0023899078,-0.0023899078,-0.008432388,0.021389008,0.8237521,0.5488179,-1.0060021,-0.008633272,1.0060021,"down","YY1AP1",55249.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr1:155629244-155658269 (-) // 91.87 // q22"]
["11754582_a_at",-0.021735191,-0.026878357,-0.018475056,0.088051796,0.032420635,0.018474579,0.30905756,0.032579467,-1.0487556,-0.06867857,1.0487556,"down","RMND5B",64777.0,"","","","chr5:177557532-177577568 (+) // 83.81 // q35.3"]
["11726838_s_at",0.09527826,0.0052347183,0.07258892,-0.0052347183,-0.035258293,-0.079811096,0.3555228,0.047690943,1.0701418,0.09780196,1.0701418,"up","SCAI",286205.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0009968 // negative regulation of signal transduction // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // inferred from mutant phenotype /// 0035024 // negative regulation of Rho protein signal transduction // inferred from sequence or structural similarity","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003714 // transcription corepressor activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction","chr9:127704813-127905797 (-) // 79.3 // q33.3"]
["11718621_at",-0.03414154,-0.04773903,-6.5612793E-4,0.026967049,6.5612793E-4,0.011005402,0.39511177,0.064473726,-1.0283906,-0.040388394,1.0283906,"down","DUSP12",11266.0,"0006464 // cellular protein modification process // traceable author statement /// 0006470 // protein dephosphorylation // not recorded /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0007254 // JNK cascade // not recorded /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0033133 // positive regulation of glucokinase activity // not recorded /// 0033133 // positive regulation of glucokinase activity // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // traceable author statement /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // not recorded /// 0005737 // cytoplasm // inferred from electronic annotation","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // traceable author statement /// 0008138 // protein tyrosine/serine/threonine phosphatase activity // not recorded /// 0008138 // protein tyrosine/serine/threonine phosphatase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008270 // zinc ion binding // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0019900 // kinase binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:161719567-161726952 (+) // 93.12 // q23.3"]
["11756860_x_at",-0.0010414124,0.0010414124,0.08249569,0.0028247833,-0.061174393,-0.014929771,0.58178985,0.19577914,1.0366472,0.05192499,1.0366472,"up","RNH1",6050.0,"0006402 // mRNA catabolic process // non-traceable author statement /// 0045765 // regulation of angiogenesis // inferred from direct assay","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0032311 // angiogenin-PRI complex // inferred from physical interaction","0005515 // protein binding // inferred from physical interaction /// 0008428 // ribonuclease inhibitor activity // inferred from direct assay","chr11:494515-506741 (-) // 99.82 // p15.5"]
["11738191_a_at",0.029829979,-0.0030713081,0.10645819,-0.0538826,-0.07302046,0.0030713081,0.45362312,0.0970015,1.0611899,0.08568283,1.0611899,"up","MTFR1",9650.0,"0000266 // mitochondrial fission // inferred from sequence or structural similarity /// 0007005 // mitochondrion organization // inferred from sequence or structural similarity /// 0009060 // aerobic respiration // inferred from sequence or structural similarity","0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay","","chr8:66556887-66620573 (+) // 91.46 // q13.1"]
["11719986_at",-0.003033638,0.061249256,0.08492231,-0.059785843,0.0030331612,-0.07220554,0.3879089,0.06112147,1.0648859,0.09069879,1.0648859,"up","CCDC117",150275.0,"","","","chr22:29168657-29185283 (+) // 93.4 // q12.1"]
["11734482_at",-0.066642284,0.035514355,-0.3765912,-0.017149448,0.017149448,0.05127144,0.6628734,0.2896727,-1.1118767,-0.15299684,1.1118767,"down","ETV3L",440695.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr1:157061835-157069600 (-) // 95.81 // q23.1"]
["11727739_a_at",-0.024765491,0.024765491,-0.10752821,0.10065985,-0.093698025,0.06618929,0.76704484,0.44544348,-1.0426294,-0.060226392,1.0426294,"down","CD300LF",146722.0,"","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation","chr17:72690451-72709108 (-) // 69.13 // q25.1"]
["11755752_a_at",-0.0147099495,0.11358786,-0.3149891,-0.17515802,0.0579772,0.0147099495,0.93613476,0.807822,-1.0266042,-0.037880033,1.0266042,"down","IL16",3603.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006935 // chemotaxis // inferred from electronic annotation /// 0006955 // immune response // traceable author statement /// 0030595 // leukocyte chemotaxis // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0050930 // induction of positive chemotaxis // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay","0005125 // cytokine activity // inferred from electronic annotation","chr15:81475199-81605101 (+) // 88.0 // q25.1"]
["11740953_s_at",0.2440753,0.009489059,-0.009489059,-0.03018856,0.042069912,-0.039592266,0.70698994,0.34920076,1.0648096,0.09059543,1.0648096,"up","HDAC11",79885.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0014003 // oligodendrocyte development // inferred from electronic annotation /// 0016568 // chromatin modification // traceable author statement /// 0016568 // chromatin modification // inferred from electronic annotation /// 0016575 // histone deacetylation // inferred from direct assay","0000118 // histone deacetylase complex // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay","0004407 // histone deacetylase activity // inferred from direct assay /// 0008134 // transcription factor binding // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0031078 // histone deacetylase activity (H3-K14 specific) // inferred from electronic annotation /// 0032041 // NAD-dependent histone deacetylase activity (H3-K14 specific) // inferred from electronic annotation /// 0032129 // histone deacetylase activity (H3-K9 specific) // inferred from electronic annotation /// 0034739 // histone deacetylase activity (H4-K16 specific) // inferred from electronic annotation /// 0046969 // NAD-dependent histone deacetylase activity (H3-K9 specific) // inferred from electronic annotation /// 0046970 // NAD-dependent histone deacetylase activity (H4-K16 specific) // inferred from electronic annotation","chr3:13522743-13547924 (+) // 92.33 // p25.1"]
["11722587_at",0.05455494,0.025515556,-0.025515556,0.031072617,-0.03948784,-0.058463097,0.6878485,0.32272273,1.0284543,0.040477693,1.0284543,"up","EXOSC3",51010.0,"0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0006364 // rRNA processing // inferred from direct assay /// 0006364 // rRNA processing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0043928 // exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay // inferred from mutant phenotype /// 0043928 // exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay // traceable author statement /// 0045006 // DNA deamination // inferred from direct assay /// 0045190 // isotype switching // inferred from sequence or structural similarity /// 0045190 // isotype switching // inferred from electronic annotation /// 0071034 // CUT catabolic process // inferred from mutant phenotype","0000176 // nuclear exosome (RNase complex) // inferred from direct assay /// 0000177 // cytoplasmic exosome (RNase complex) // inferred from direct assay /// 0000178 // exosome (RNase complex) // inferred from direct assay /// 0000178 // exosome (RNase complex) // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0035327 // transcriptionally active chromatin // inferred from mutant phenotype","0000175 // 3'-5'-exoribonuclease activity // non-traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0004532 // exoribonuclease activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction","chr9:37779932-37785065 (-) // 85.69 // p13.2"]
["11738392_at",0.17901063,-0.17739296,0.0359385,-0.0359385,-0.23465729,0.094101906,0.8647,0.63928217,1.0506995,0.071350075,1.0506995,"up","LIPN",643418.0,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0016042 // lipid catabolic process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","0016787 // hydrolase activity // inferred from electronic annotation /// 0016788 // hydrolase activity, acting on ester bonds // inferred from electronic annotation","chr10:90521162-90537999 (+) // 99.75 // q23.31"]
["11715616_a_at",-0.02605629,0.005935669,0.029237747,0.0151023865,-0.005935669,-0.014904976,0.9333221,0.8004058,1.0034382,0.0049518156,1.0034382,"up","NDUFAB1",4706.0,"0006120 // mitochondrial electron transport, NADH to ubiquinone // non-traceable author statement /// 0006633 // fatty acid biosynthetic process // non-traceable author statement /// 0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0009249 // protein lipoylation // inferred from mutant phenotype /// 0022900 // electron transport chain // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005747 // mitochondrial respiratory chain complex I // inferred from direct assay /// 0005747 // mitochondrial respiratory chain complex I // inferred from sequence or structural similarity /// 0005747 // mitochondrial respiratory chain complex I // non-traceable author statement /// 0005759 // mitochondrial matrix // inferred from sequence or structural similarity /// 0031966 // mitochondrial membrane // inferred from sequence or structural similarity /// 0031966 // mitochondrial membrane // non-traceable author statement /// 0070469 // respiratory chain // inferred from electronic annotation","0000036 // acyl carrier activity // non-traceable author statement /// 0005504 // fatty acid binding // inferred from sequence or structural similarity /// 0005509 // calcium ion binding // non-traceable author statement /// 0008137 // NADH dehydrogenase (ubiquinone) activity // non-traceable author statement /// 0031177 // phosphopantetheine binding // inferred from electronic annotation","chr16:23592332-23607637 (-) // 78.93 // p12.2"]
["11739585_a_at",-0.01959753,0.1978507,-0.03779745,0.01959753,-0.3556962,0.061920166,0.750157,0.41683125,1.1005399,0.13821147,1.1005399,"up","PRKD3",23683.0,"0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007205 // protein kinase C-activating G-protein coupled receptor signaling pathway // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004697 // protein kinase C activity // inferred from electronic annotation /// 0004697 // protein kinase C activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:37477644-37551513 (-) // 92.1 // p22.2"]
["11758958_at",-0.006021023,-0.25090575,0.026885986,-0.109446764,0.053696394,0.006021023,0.83766353,0.58065796,-1.0425408,-0.06010383,1.0425408,"down","DEFA1 /// DEFA1B /// DEFA3","1667 /// 1668 /// 728358","0006935 // chemotaxis // traceable author statement /// 0006952 // defense response // inferred from electronic annotation /// 0006955 // immune response // traceable author statement /// 0009615 // response to virus // inferred from electronic annotation /// 0031640 // killing of cells of other organism // inferred from electronic annotation /// 0042742 // defense response to bacterium // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0050832 // defense response to fungus // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005796 // Golgi lumen // traceable author statement /// 0031012 // extracellular matrix // inferred from direct assay /// 0035578 // azurophil granule lumen // traceable author statement","","chr8:6873390-6874955 (-) // 79.24 // p23.1"]
["11723776_s_at",-0.016686916,-0.021261215,0.01668644,0.056542873,0.061196804,-0.10558224,0.9511379,0.8523437,-1.0077513,-0.0111397095,1.0077513,"down","BRD3",8019.0,"0006357 // regulation of transcription from RNA polymerase II promoter // inferred from direct assay","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0003682 // chromatin binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0070577 // histone acetyl-lysine binding // inferred from direct assay","chr9:136895426-136918712 (-) // 93.11 // q34.2"]
["11745489_s_at",-0.100543976,0.045263767,0.10558367,-0.049999237,0.1079402,-0.045263767,0.9622385,0.8833294,1.0087314,0.012542022,1.0087314,"up","GOLGA8C /// GOLGA8DP /// GOLGA8E /// GOLGA8F /// GOLGA8G","100132565 /// 100132979 /// 283768 /// 390535 /// 729786","","0005794 // Golgi apparatus // inferred from electronic annotation","","chr15:28623789-28636412 (+) // 99.56 // q13.1 /// chr15:23435075-23447664 (+) // 98.87 // q11.2 /// chr15:20767679-20780266 (+) // 98.85 // q11.2 /// chr15:28765515-28778137 (-) // 99.54 // q13.1 /// chr15:22703113-22715722 (-) // 98.96 // q11.2"]
["11723426_a_at",0.005340576,-0.03853321,0.068078995,-0.011508942,-0.005340576,0.05394268,0.99544376,0.9852163,-1.00051,-7.355542E-4,1.00051,"down","ETFB",2109.0,"0006810 // transport // inferred from electronic annotation /// 0022900 // electron transport chain // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement /// 0005759 // mitochondrial matrix // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0009055 // electron carrier activity // inferred from electronic annotation /// 0009055 // electron carrier activity // traceable author statement","chr19:51848424-51869674 (-) // 91.6 // q13.41"]
["11756480_s_at",0.023264885,0.01934719,0.0033693314,-0.0072250366,-0.0033693314,-0.031541824,0.36560383,0.05182916,1.0205681,0.029372498,1.0205681,"up","CSDE1",7812.0,"0000165 // MAPK cascade // traceable author statement /// 0000186 // activation of MAPKK activity // traceable author statement /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007265 // Ras protein signal transduction // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008542 // visual learning // inferred from electronic annotation /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0008584 // male gonad development // traceable author statement /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0032228 // regulation of synaptic transmission, GABAergic // inferred from electronic annotation /// 0035022 // positive regulation of Rac protein signal transduction // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048169 // regulation of long-term neuronal synaptic plasticity // inferred from electronic annotation /// 0050900 // leukocyte migration // traceable author statement /// 0051146 // striated muscle cell differentiation // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation","chr1:115259537-115292811 (-) // 98.74 // p13.2"]
["11744572_a_at",-0.062734604,-0.077833176,0.06232643,0.010971069,0.015270233,-0.010971069,0.8130416,0.5279698,-1.0218408,-0.031170461,1.0218408,"down","KLF5",688.0,"0001525 // angiogenesis // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0030033 // microvillus assembly // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr13:73629113-73650116 (+) // 98.09 // q22.1"]
["11740190_s_at",-0.34119463,-0.01488924,0.10387516,-0.19326782,0.014888763,0.018862247,0.9498637,0.8472363,-1.0216473,-0.030897273,1.0216473,"down","DICER1",23405.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0001525 // angiogenesis // inferred from electronic annotation /// 0001942 // hair follicle development // inferred from electronic annotation /// 0006396 // RNA processing // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0010070 // zygote asymmetric cell division // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0010626 // negative regulation of Schwann cell proliferation // inferred from sequence or structural similarity /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0014040 // positive regulation of Schwann cell differentiation // inferred from sequence or structural similarity /// 0019827 // stem cell maintenance // inferred from electronic annotation /// 0021522 // spinal cord motor neuron differentiation // inferred from electronic annotation /// 0021675 // nerve development // inferred from sequence or structural similarity /// 0021889 // olfactory bulb interneuron differentiation // inferred from electronic annotation /// 0021987 // cerebral cortex development // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0030326 // embryonic limb morphogenesis // inferred from electronic annotation /// 0030422 // production of siRNA involved in RNA interference // inferred from direct assay /// 0030422 // production of siRNA involved in RNA interference // inferred from electronic annotation /// 0030423 // targeting of mRNA for destruction involved in RNA interference // inferred from mutant phenotype /// 0031047 // gene silencing by RNA // inferred from electronic annotation /// 0031054 // pre-miRNA processing // inferred from direct assay /// 0031054 // pre-miRNA processing // inferred from electronic annotation /// 0031069 // hair follicle morphogenesis // inferred from electronic annotation /// 0031643 // positive regulation of myelination // inferred from sequence or structural similarity /// 0032290 // peripheral nervous system myelin formation // inferred from sequence or structural similarity /// 0035116 // embryonic hindlimb morphogenesis // inferred from electronic annotation /// 0035196 // production of miRNAs involved in gene silencing by miRNA // inferred from sequence or structural similarity /// 0035196 // production of miRNAs involved in gene silencing by miRNA // inferred from electronic annotation /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0042487 // regulation of odontogenesis of dentin-containing tooth // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0045069 // regulation of viral genome replication // inferred from electronic annotation /// 0045595 // regulation of cell differentiation // inferred from electronic annotation /// 0045664 // regulation of neuron differentiation // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048536 // spleen development // inferred from electronic annotation /// 0048565 // digestive tract development // inferred from electronic annotation /// 0048730 // epidermis morphogenesis // inferred from electronic annotation /// 0048754 // branching morphogenesis of a tube // inferred from electronic annotation /// 0048812 // neuron projection morphogenesis // inferred from sequence or structural similarity /// 0050767 // regulation of neurogenesis // inferred from electronic annotation /// 0051225 // spindle assembly // inferred from electronic annotation /// 0051607 // defense response to virus // inferred from electronic annotation /// 0055013 // cardiac muscle cell development // inferred from electronic annotation /// 0060576 // intestinal epithelial cell development // inferred from electronic annotation /// 0070173 // regulation of enamel mineralization // inferred from electronic annotation /// 0071335 // hair follicle cell proliferation // inferred from electronic annotation /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016442 // RNA-induced silencing complex // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003725 // double-stranded RNA binding // inferred from direct assay /// 0003725 // double-stranded RNA binding // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004519 // endonuclease activity // inferred from electronic annotation /// 0004525 // ribonuclease III activity // inferred from direct assay /// 0004525 // ribonuclease III activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016891 // endoribonuclease activity, producing 5'-phosphomonoesters // inferred from electronic annotation /// 0035198 // miRNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr14:95552565-95608087 (-) // 97.95 // q32.13"]
["11761803_at",-0.101772785,-0.109407425,-0.035994053,0.07084894,0.035994053,0.10912371,0.18078998,0.007992458,-1.1129435,-0.1543804,1.1129435,"down","WBSCR27",155368.0,"","","","chr7:73253910-73256846 (-) // 73.3 // q11.23"]
["11741905_at",0.054220676,-0.15022326,-0.055912495,0.18618798,0.02474451,-0.02474451,0.6422963,0.2642632,-1.0812507,-0.11270102,1.0812507,"down","DEFB105A /// DEFB105B","245908 /// 504180","0006952 // defense response // inferred from electronic annotation /// 0042742 // defense response to bacterium // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","","chr8:7345190-7347115 (+) // 100.0 // p23.1 /// chr8:7679487-7681412 (-) // 100.0 // p23.1"]
["11752685_a_at",0.003715992,-0.003715992,-0.05569434,-0.02122736,0.059199333,0.1854496,0.6010613,0.21369582,-1.0666144,-0.09303869,1.0666144,"down","AQP4",361.0,"0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006833 // water transport // traceable author statement /// 0006833 // water transport // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0007588 // excretion // traceable author statement /// 0007605 // sensory perception of sound // inferred from electronic annotation /// 0030104 // water homeostasis // inferred from electronic annotation /// 0050891 // multicellular organismal water homeostasis // inferred from expression pattern /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0070295 // renal water absorption // inferred from electronic annotation /// 0071346 // cellular response to interferon-gamma // inferred from direct assay","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0005911 // cell-cell junction // inferred from electronic annotation /// 0009897 // external side of plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0046930 // pore complex // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation /// 0005372 // water transmembrane transporter activity // traceable author statement /// 0015250 // water channel activity // not recorded /// 0015250 // water channel activity // inferred from electronic annotation /// 0015288 // porin activity // inferred from electronic annotation","chr18:24435477-24442812 (-) // 98.62 // q11.2"]
["11747865_s_at",0.09170914,0.0764637,0.11967087,-0.0764637,-0.17846203,-0.1456213,0.11455932,0.0021506718,1.1723989,0.22946355,1.1723989,"up","EIF3C /// EIF3CL","728689 /// 8663","0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred by curator /// 0006413 // translational initiation // inferred from direct assay /// 0006413 // translational initiation // traceable author statement /// 0006413 // translational initiation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005852 // eukaryotic translation initiation factor 3 complex // inferred from direct assay /// 0005852 // eukaryotic translation initiation factor 3 complex // inferred from electronic annotation","0003743 // translation initiation factor activity // inferred by curator /// 0003743 // translation initiation factor activity // inferred from direct assay /// 0003743 // translation initiation factor activity // inferred from electronic annotation","chr16:28722785-28746857 (+) // 99.92 // p11.2 /// chr16:28391095-28415161 (-) // 99.87 // p11.2"]
["11740341_x_at",0.02312398,0.08713031,-0.05129242,-0.06734514,0.074590206,-0.02312398,0.8874984,0.6890128,1.0174422,0.024946876,1.0174422,"up","ZNF491",126069.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:11909344-11919306 (+) // 86.57 // p13.2"]
["11716606_s_at",0.018649101,-0.018649101,0.08206558,0.030236244,-0.09650707,-0.030583382,0.64891005,0.27278,1.0422056,0.05963987,1.0422056,"up","STOML2",30968.0,"","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005856 // cytoskeleton // traceable author statement /// 0008180 // signalosome // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation","0005102 // receptor binding // traceable author statement","chr9:35099592-35103181 (-) // 97.0 // p13.3"]
["11717150_s_at",0.014472008,0.026338577,0.023412704,-0.014472008,-0.07415867,-0.016780853,0.3515877,0.0464322,1.0399722,0.056544945,1.0399722,"up","C16orf57",79650.0,"","","","chr16:58035276-58055522 (+) // 82.36 // q21"]
["11740006_a_at",0.10403538,0.024459839,0.07439709,-0.024459839,-0.064305305,-0.05472374,0.20813233,0.011538364,1.0833207,0.11546044,1.0833207,"up","KIAA0895",23366.0,"","","","chr7:36363758-36406850 (-) // 99.84 // p14.2"]
["11754427_a_at",0.02799511,-0.031032085,0.030475616,0.0039010048,-0.017495155,-0.0039010048,0.80687636,0.51607496,1.0104359,0.014977858,1.0104359,"up","FAM190B",54462.0,"","","","chr10:86153608-86278269 (+) // 92.2 // q23.1"]
["11737900_x_at",-0.02425766,0.095389366,0.039041996,-0.16821766,0.02425766,-0.10501003,0.5254463,0.14552507,1.0865198,0.11971451,1.0865198,"up","TOX2",84969.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation","chr20:42602002-42698252 (+) // 91.5 // q13.12"]
["11750479_a_at",0.012455463,-0.06456995,0.017570972,-0.16301966,-0.012455463,0.12441635,0.98584193,0.95266634,1.0038232,0.0055051385,1.0038232,"up","PPARGC1A",10891.0,"0001659 // temperature homeostasis // traceable author statement /// 0001678 // cellular glucose homeostasis // non-traceable author statement /// 0006094 // gluconeogenesis // non-traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006397 // mRNA processing // traceable author statement /// 0006461 // protein complex assembly // traceable author statement /// 0007005 // mitochondrion organization // non-traceable author statement /// 0007005 // mitochondrion organization // inferred from electronic annotation /// 0007586 // digestion // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0010941 // regulation of cell death // inferred from direct assay /// 0014850 // response to muscle activity // inferred from sequence or structural similarity /// 0014850 // response to muscle activity // inferred from electronic annotation /// 0019395 // fatty acid oxidation // non-traceable author statement /// 0022904 // respiratory electron transport chain // inferred from electronic annotation /// 0030521 // androgen receptor signaling pathway // non-traceable author statement /// 0034599 // cellular response to oxidative stress // inferred from electronic annotation /// 0035066 // positive regulation of histone acetylation // traceable author statement /// 0042594 // response to starvation // non-traceable author statement /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0045333 // cellular respiration // traceable author statement /// 0045722 // positive regulation of gluconeogenesis // traceable author statement /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // non-traceable author statement /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046321 // positive regulation of fatty acid oxidation // traceable author statement /// 0046321 // positive regulation of fatty acid oxidation // inferred from electronic annotation /// 0050821 // protein stabilization // traceable author statement /// 0050873 // brown fat cell differentiation // traceable author statement /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0070997 // neuron death // inferred from direct assay","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005665 // DNA-directed RNA polymerase II, core complex // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0001104 // RNA polymerase II transcription cofactor activity // traceable author statement /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // traceable author statement /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0016922 // ligand-dependent nuclear receptor binding // inferred from physical interaction /// 0030374 // ligand-dependent nuclear receptor transcription coactivator activity // inferred from direct assay /// 0050681 // androgen receptor binding // non-traceable author statement","chr4:23816011-23883755 (-) // 98.71 // p15.2"]
["11720670_a_at",3.3807755E-4,-0.08962917,-3.3855438E-4,-0.013874531,0.007250786,0.09282684,0.63541746,0.25580072,-1.0414625,-0.05861095,1.0414625,"down","SNX7",51375.0,"0006810 // transport // inferred from electronic annotation /// 0007154 // cell communication // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0008289 // lipid binding // inferred from electronic annotation /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation","chr1:99127212-99226056 (+) // 94.13 // p21.3"]
["11730183_s_at",0.08820295,-0.060644627,0.0015788078,0.058837414,-0.0015788078,-0.01170826,0.97346723,0.91554,-1.0037994,-0.005471044,1.0037994,"down","SH3GL2",6456.0,"0002090 // regulation of receptor internalization // inferred from electronic annotation /// 0006892 // post-Golgi vesicle-mediated transport // traceable author statement /// 0006897 // endocytosis // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007417 // central nervous system development // traceable author statement /// 0016044 // cellular membrane organization // traceable author statement /// 0042059 // negative regulation of epidermal growth factor receptor signaling pathway // traceable author statement /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048488 // synaptic vesicle endocytosis // inferred from electronic annotation","0000139 // Golgi membrane // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008289 // lipid binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction","chr9:17578708-17797122 (+) // 97.99 // p22.2"]
["11756721_a_at",0.050268173,0.013346672,-0.014844894,0.0092077255,-0.042515755,-0.0092077255,0.65184444,0.2766341,1.0213155,0.030428542,1.0213155,"up","CASP8AP2",9994.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from sequence or structural similarity /// 0007049 // cell cycle // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0008625 // induction of apoptosis via death domain receptors // inferred from sequence or structural similarity /// 0071260 // cellular response to mechanical stimulus // inferred from expression pattern","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003714 // transcription corepressor activity // inferred from direct assay /// 0005123 // death receptor binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008656 // cysteine-type endopeptidase activator activity involved in apoptotic process // inferred from sequence or structural similarity /// 0016505 // apoptotic protease activator activity // inferred from sequence or structural similarity","chr6:90539659-90584153 (+) // 88.09 // q15"]
["11747635_x_at",0.0078110695,0.096180916,0.07724905,-0.0078115463,-0.060037136,-0.016166687,0.356088,0.04788887,1.0632043,0.08841883,1.0632043,"up","PYGB",5834.0,"0005975 // carbohydrate metabolic process // traceable author statement /// 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0005977 // glycogen metabolic process // inferred from electronic annotation /// 0005980 // glycogen catabolic process // non-traceable author statement /// 0005980 // glycogen catabolic process // traceable author statement /// 0005980 // glycogen catabolic process // inferred from electronic annotation /// 0006006 // glucose metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement","0005625 // soluble fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0030424 // axon // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004645 // phosphorylase activity // inferred from electronic annotation /// 0008144 // drug binding // inferred from electronic annotation /// 0008184 // glycogen phosphorylase activity // non-traceable author statement /// 0008184 // glycogen phosphorylase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation","chr20:25228720-25277544 (+) // 96.97 // p11.21"]
["11750124_a_at",0.022042751,-0.011842966,0.13564205,0.011842966,-0.10136819,-0.18838096,0.49896356,0.12562788,1.1028597,0.14124931,1.1028597,"up","NCAM2",4685.0,"0007155 // cell adhesion // inferred from electronic annotation /// 0007158 // neuron cell-cell adhesion // traceable author statement","0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0030424 // axon // inferred from electronic annotation","","chr21:22370693-22910633 (+) // 96.81 // q21.1"]
["11731513_at",0.051105976,0.026321888,-0.044205666,-0.026321888,-0.13540602,0.031778336,0.73369503,0.3918576,1.0384203,0.05439052,1.0384203,"up","XPO4",64328.0,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0046827 // positive regulation of protein export from nucleus // inferred from mutant phenotype","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr13:21351468-21476914 (-) // 94.93 // q12.11"]
["11737834_at",0.0,-0.045042753,0.19267178,-0.07018161,0.0,0.07095909,0.8422772,0.58926153,1.034512,0.04895044,1.034512,"up","IL12B",3593.0,"0001916 // positive regulation of T cell mediated cytotoxicity // inferred from sequence or structural similarity /// 0001916 // positive regulation of T cell mediated cytotoxicity // inferred from electronic annotation /// 0002230 // positive regulation of defense response to virus by host // inferred from direct assay /// 0002230 // positive regulation of defense response to virus by host // inferred from sequence or structural similarity /// 0002230 // positive regulation of defense response to virus by host // inferred from electronic annotation /// 0002827 // positive regulation of T-helper 1 type immune response // inferred from direct assay /// 0002827 // positive regulation of T-helper 1 type immune response // inferred from sequence or structural similarity /// 0002827 // positive regulation of T-helper 1 type immune response // inferred from electronic annotation /// 0002860 // positive regulation of natural killer cell mediated cytotoxicity directed against tumor cell target // inferred from direct assay /// 0002862 // negative regulation of inflammatory response to antigenic stimulus // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from direct assay /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0010224 // response to UV-B // inferred from direct assay /// 0010535 // positive regulation of activation of JAK2 kinase activity // inferred from direct assay /// 0016477 // cell migration // inferred from direct assay /// 0019221 // cytokine-mediated signaling pathway // inferred from electronic annotation /// 0019953 // sexual reproduction // traceable author statement /// 0030101 // natural killer cell activation // inferred from direct assay /// 0032693 // negative regulation of interleukin-10 production // inferred from mutant phenotype /// 0032700 // negative regulation of interleukin-17 production // inferred from direct assay /// 0032725 // positive regulation of granulocyte macrophage colony-stimulating factor production // inferred from direct assay /// 0032729 // positive regulation of interferon-gamma production // inferred from direct assay /// 0032729 // positive regulation of interferon-gamma production // inferred from electronic annotation /// 0032733 // positive regulation of interleukin-10 production // inferred from direct assay /// 0032733 // positive regulation of interleukin-10 production // traceable author statement /// 0032735 // positive regulation of interleukin-12 production // inferred from direct assay /// 0032740 // positive regulation of interleukin-17 production // inferred from direct assay /// 0032760 // positive regulation of tumor necrosis factor production // inferred from mutant phenotype /// 0032816 // positive regulation of natural killer cell activation // inferred by curator /// 0032816 // positive regulation of natural killer cell activation // inferred from direct assay /// 0032819 // positive regulation of natural killer cell proliferation // inferred from direct assay /// 0034105 // positive regulation of tissue remodeling // inferred by curator /// 0034393 // positive regulation of smooth muscle cell apoptotic process // inferred from direct assay /// 0042035 // regulation of cytokine biosynthetic process // traceable author statement /// 0042088 // T-helper 1 type immune response // traceable author statement /// 0042093 // T-helper cell differentiation // inferred from direct assay /// 0042095 // interferon-gamma biosynthetic process // traceable author statement /// 0042102 // positive regulation of T cell proliferation // inferred from direct assay /// 0042102 // positive regulation of T cell proliferation // inferred from electronic annotation /// 0042104 // positive regulation of activated T cell proliferation // inferred from direct assay /// 0042346 // positive regulation of NF-kappaB import into nucleus // traceable author statement /// 0042510 // regulation of tyrosine phosphorylation of Stat1 protein // inferred from direct assay /// 0042517 // positive regulation of tyrosine phosphorylation of Stat3 protein // inferred from direct assay /// 0042520 // positive regulation of tyrosine phosphorylation of Stat4 protein // inferred from direct assay /// 0042523 // positive regulation of tyrosine phosphorylation of Stat5 protein // inferred from direct assay /// 0042832 // defense response to protozoan // inferred from electronic annotation /// 0043382 // positive regulation of memory T cell differentiation // inferred from sequence or structural similarity /// 0044130 // negative regulation of growth of symbiont in host // inferred from electronic annotation /// 0045078 // positive regulation of interferon-gamma biosynthetic process // traceable author statement /// 0045672 // positive regulation of osteoclast differentiation // inferred from direct assay /// 0045785 // positive regulation of cell adhesion // inferred from direct assay /// 0048662 // negative regulation of smooth muscle cell proliferation // inferred from direct assay /// 0050671 // positive regulation of lymphocyte proliferation // inferred from direct assay /// 0050729 // positive regulation of inflammatory response // inferred by curator /// 0050829 // defense response to Gram-negative bacterium // inferred from direct assay /// 0051135 // positive regulation of NK T cell activation // inferred by curator /// 0051135 // positive regulation of NK T cell activation // inferred from direct assay /// 0051142 // positive regulation of NK T cell proliferation // inferred from direct assay /// 0051607 // defense response to virus // inferred from electronic annotation /// 0071222 // cellular response to lipopolysaccharide // inferred from electronic annotation /// 0071346 // cellular response to interferon-gamma // inferred from electronic annotation /// 2000318 // positive regulation of T-helper 17 type immune response // inferred from sequence or structural similarity /// 2000330 // positive regulation of T-helper 17 cell lineage commitment // inferred from sequence or structural similarity","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0005615 // extracellular space // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0043514 // interleukin-12 complex // inferred from direct assay /// 0043514 // interleukin-12 complex // inferred from electronic annotation /// 0070743 // interleukin-23 complex // inferred from direct assay","0004896 // cytokine receptor activity // inferred from electronic annotation /// 0005125 // cytokine activity // inferred from direct assay /// 0005125 // cytokine activity // inferred from electronic annotation /// 0005126 // cytokine receptor binding // inferred from electronic annotation /// 0005143 // interleukin-12 receptor binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // inferred from direct assay /// 0042164 // interleukin-12 alpha subunit binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0045519 // interleukin-23 receptor binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from physical interaction","chr5:158741790-158757895 (-) // 87.07 // q33.3"]
["11747064_x_at",0.0120277405,0.0032224655,-0.023550034,-0.0032224655,-0.054463387,0.06472397,0.96554095,0.8943353,-1.00355,-0.0051125735,1.00355,"down","ANXA11",311.0,"0006909 // phagocytosis // inferred from expression pattern /// 0007049 // cell cycle // inferred from electronic annotation /// 0007109 // cytokinesis, completion of separation // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation /// 0051592 // response to calcium ion // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from direct assay /// 0005635 // nuclear envelope // non-traceable author statement /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // non-traceable author statement /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005819 // spindle // inferred from direct assay /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0030496 // midbody // inferred from direct assay /// 0042470 // melanosome // inferred from electronic annotation /// 0042581 // specific granule // inferred from direct assay /// 0042582 // azurophil granule // inferred from direct assay /// 0045335 // phagocytic vesicle // inferred from direct assay","0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005544 // calcium-dependent phospholipid binding // inferred from electronic annotation /// 0008429 // phosphatidylethanolamine binding // inferred from electronic annotation /// 0044548 // S100 protein binding // inferred from physical interaction /// 0048306 // calcium-dependent protein binding // inferred from physical interaction","chr10:81915433-81965314 (-) // 91.62 // q22.3"]
["11718976_x_at",0.007703781,-0.013248444,0.019534111,-0.08944321,0.058384895,-0.007703781,0.895739,0.7087009,1.0122628,0.017583916,1.0122628,"up","ARPP19",10776.0,"0000086 // G2/M transition of mitotic cell cycle // inferred from mutant phenotype /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from mutant phenotype /// 0007067 // mitosis // inferred from electronic annotation /// 0045722 // positive regulation of gluconeogenesis // inferred from direct assay /// 0046326 // positive regulation of glucose import // non-traceable author statement /// 0051301 // cell division // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0004864 // protein phosphatase inhibitor activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from direct assay /// 0008601 // protein phosphatase type 2A regulator activity // inferred from sequence or structural similarity /// 0015459 // potassium channel regulator activity // inferred from direct assay /// 0019212 // phosphatase inhibitor activity // inferred from sequence or structural similarity /// 0051721 // protein phosphatase 2A binding // inferred from sequence or structural similarity","chr15:52839244-52849941 (-) // 74.63 // q21.2"]
["11748340_x_at",-0.017241955,0.017241955,0.18064356,0.14886522,-0.05040598,-0.02981615,0.8884772,0.69291896,1.0262153,0.037333462,1.0262153,"up","LAIR1",3903.0,"","0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr19:54866879-54876454 (-) // 100.0 // q13.42"]
["11737797_a_at",-0.07876253,-0.030302048,0.027038574,0.027038574,0.013931274,-0.013931751,0.69371027,0.3308607,-1.0255194,-0.036354743,1.0255194,"down","FAM40A",85369.0,"0022604 // regulation of cell morphogenesis // inferred from mutant phenotype /// 0030866 // cortical actin cytoskeleton organization // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr1:110577240-110597245 (+) // 97.72 // p13.3"]
["11739933_a_at",0.07960796,0.0671587,-2.951622E-4,-0.11537123,2.951622E-4,-0.10635948,0.36487523,0.05163433,1.0887221,0.12263576,1.0887221,"up","FAM111B",374393.0,"0008152 // metabolic process // inferred from electronic annotation","","0003824 // catalytic activity // inferred from electronic annotation","chr11:58874657-58894312 (+) // 66.83 // q12.1"]
["11760711_at",-0.18780375,0.017722607,0.10072565,-0.06629658,0.029278755,-0.017722607,0.9876092,0.95946664,-1.0033824,-0.0048716012,1.0033824,"down","TMEM14B",81853.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr6:10748037-10756585 (+) // 80.64 // p24.2"]
["11739530_at",0.16705942,0.05089283,0.3334067,-0.05089283,-0.24697542,-0.39281893,0.30740505,0.03228702,1.332389,0.41401535,1.332389,"up","PLGLB1 /// PLGLB2","5342 /// 5343","","0005576 // extracellular region // inferred from electronic annotation","","chr2:88047605-88058995 (+) // 69.57 // p11.2 /// chr2:106998561-107010027 (+) // 68.21 // q12.2 /// chr2:87237586-87248973 (-) // 69.5 // p11.2"]
["11733132_at",-0.02178955,-0.07407665,-0.2612939,0.021789074,0.08788109,0.028409004,0.4487895,0.09460968,-1.1212281,-0.1650798,1.1212281,"down","OLFML1",283298.0,"","0005576 // extracellular region // inferred from electronic annotation","","chr11:7506599-7533136 (+) // 89.59 // p15.4"]
["11741029_x_at",-0.0017137527,0.08627939,7.658005E-4,0.046593666,-7.658005E-4,-0.052508354,0.7940075,0.4929363,1.0214869,0.03067067,1.0214869,"up","CSTF1",1477.0,"0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006378 // mRNA polyadenylation // traceable author statement /// 0006379 // mRNA cleavage // traceable author statement /// 0006396 // RNA processing // traceable author statement /// 0006397 // mRNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0031124 // mRNA 3'-end processing // traceable author statement","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0003723 // RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr20:54967415-54979582 (+) // 99.31 // q13.2"]
["11753208_x_at",-0.05497837,-0.08335018,-0.061499596,0.077598095,0.1013813,0.05497837,0.08459432,8.124478E-4,-1.1054205,-0.14459524,1.1054205,"down","EGFL7",51162.0,"0001525 // angiogenesis // inferred from electronic annotation /// 0001568 // blood vessel development // inferred from sequence or structural similarity /// 0001568 // blood vessel development // inferred from electronic annotation /// 0001570 // vasculogenesis // inferred from sequence or structural similarity /// 0001570 // vasculogenesis // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // inferred from electronic annotation","0005576 // extracellular region // inferred from sequence or structural similarity /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr9:139559209-139566951 (+) // 99.82 // q34.3"]
["11743091_x_at",0.030475616,0.017363548,0.07895088,-0.07800102,-0.017363548,-0.0941267,0.27748367,0.024443567,1.0758128,0.10542708,1.0758128,"up","SLC36A4",120103.0,"0006810 // transport // inferred from electronic annotation /// 0006865 // amino acid transport // inferred from electronic annotation /// 0015808 // L-alanine transport // inferred from direct assay /// 0015824 // proline transport // inferred from direct assay /// 0015827 // tryptophan transport // inferred from direct assay","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0015293 // symporter activity // inferred from electronic annotation","chr11:92880306-92931141 (-) // 84.23 // q21"]
["11760101_a_at",-0.15039062,-3.2567978E-4,0.10733843,0.09267998,-0.020003319,3.2567978E-4,0.87578905,0.66226304,-1.0272543,-0.03879343,1.0272543,"down","IP6K2",51447.0,"0016310 // phosphorylation // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0030308 // negative regulation of cell growth // inferred from mutant phenotype /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0046854 // phosphatidylinositol phosphorylation // inferred from direct assay /// 0060337 // type I interferon-mediated signaling pathway // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0045111 // intermediate filament cytoskeleton // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0000832 // inositol hexakisphosphate 5-kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008440 // inositol-1,4,5-trisphosphate 3-kinase activity // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0052723 // inositol hexakisphosphate 1-kinase activity // inferred from electronic annotation /// 0052724 // inositol hexakisphosphate 3-kinase activity // inferred from electronic annotation","chr3:48730891-48754654 (-) // 94.47 // p21.31"]
["11750826_x_at",0.04992771,0.1968944,-0.08042121,-0.18619847,-0.04992795,0.18277884,0.8540442,0.6142992,1.0520837,0.07324953,1.0520837,"up","ADAMDEC1",27299.0,"0006508 // proteolysis // inferred from electronic annotation /// 0006955 // immune response // non-traceable author statement /// 0007162 // negative regulation of cell adhesion // non-traceable author statement /// 0007229 // integrin-mediated signaling pathway // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","0004222 // metalloendopeptidase activity // non-traceable author statement /// 0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:24241932-24263526 (+) // 95.33 // p21.2"]
["11741122_a_at",0.03564787,0.17721224,-0.2006464,-0.03564787,0.059288025,-0.11340332,0.93036366,0.79269624,1.0238414,0.033992223,1.0238414,"up","LYPD1",116372.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement","0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031225 // anchored to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:133402336-133429152 (-) // 98.35 // q21.2"]
["11721487_s_at",0.097527504,0.00380373,0.24644995,-0.00380373,-0.08857298,-0.17091799,0.4179691,0.07590505,1.1516417,0.20369196,1.1516417,"up","TP53RK",112858.0,"0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0009103 // lipopolysaccharide biosynthetic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0002039 // p53 binding // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0016773 // phosphotransferase activity, alcohol group as acceptor // inferred from electronic annotation","chr20:45313003-45318276 (-) // 57.78 // q13.12"]
["11731663_a_at",0.18214154,-0.12303591,-0.0147230625,0.014723301,0.11537361,-0.27273726,0.8882493,0.6925989,1.0441587,0.062340997,1.0441587,"up","KIAA1217",56243.0,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0048706 // embryonic skeletal system development // inferred from sequence or structural similarity","0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation","","chr10:24497595-24836772 (+) // 97.56 // p12.2"]
["11726054_a_at",-0.12917113,-0.013123751,-0.055455208,0.013123751,0.07374811,0.19690847,0.3979961,0.06570255,-1.1176823,-0.16051021,1.1176823,"down","MUC4",4585.0,"0007155 // cell adhesion // inferred from electronic annotation /// 0007160 // cell-matrix adhesion // inferred from electronic annotation /// 0016266 // O-glycan processing // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // non-traceable author statement /// 0005796 // Golgi lumen // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005176 // ErbB-2 class receptor binding // traceable author statement /// 0005201 // extracellular matrix structural constituent // non-traceable author statement /// 0030197 // extracellular matrix constituent, lubricant activity // non-traceable author statement","chr3:195473635-195539148 (-) // 98.61 // q29"]
["11759993_at",-0.13545036,0.18576908,0.10399246,0.058650017,-0.058650017,-0.24973464,0.71632606,0.36454266,1.0978508,0.134682,1.0978508,"up","ORAOV1",220064.0,"","","","chr11:69467843-69490112 (-) // 92.73 // q13.3"]
["11738031_at",0.22545695,-0.020439625,0.020439386,0.13897896,-0.08374095,-0.19753361,0.72678185,0.38129398,1.0886831,0.122584105,1.0886831,"up","FAM153C",653316.0,"","","","chr5:177435688-177474656 (+) // 88.58 // q35.3 /// chr5:175490073-175541588 (+) // 89.57 // q35.2 /// chr5:177150577-177208143 (-) // 97.25 // q35.3"]
["11749254_a_at",-0.09101868,-0.113183975,-0.15488529,0.15199566,0.09101868,0.13885212,0.08459432,7.206013E-4,-1.1867243,-0.24698481,1.1867243,"down","PRSS23",11098.0,"0006508 // proteolysis // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay","0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr11:86511586-86520169 (+) // 98.34 // q14.2"]
["11741653_a_at",-0.0630846,0.123838425,0.12192488,0.06086397,-0.06086397,-0.061431885,0.6961846,0.33405682,1.0580224,0.081370145,1.0580224,"up","ABCG4",64137.0,"0006200 // ATP catabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0033344 // cholesterol efflux // traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0017127 // cholesterol transporter activity // traceable author statement /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from physical interaction","chr11:119020222-119033372 (+) // 98.9 // q23.3"]
["11731864_at",0.28407383,-0.053221703,-0.09071112,0.03367114,0.22593832,-0.03367138,0.9505093,0.8505323,-1.0200211,-0.028598968,1.0200211,"down","NKX2-2",4821.0,"0003323 // type B pancreatic cell development // inferred from electronic annotation /// 0003326 // pancreatic A cell fate commitment // inferred from electronic annotation /// 0003327 // type B pancreatic cell fate commitment // inferred from electronic annotation /// 0003329 // pancreatic PP cell fate commitment // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007224 // smoothened signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007420 // brain development // traceable author statement /// 0014003 // oligodendrocyte development // inferred from electronic annotation /// 0021522 // spinal cord motor neuron differentiation // inferred from electronic annotation /// 0021529 // spinal cord oligodendrocyte cell differentiation // inferred from electronic annotation /// 0021530 // spinal cord oligodendrocyte cell fate specification // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0031018 // endocrine pancreas development // traceable author statement /// 0031018 // endocrine pancreas development // inferred from electronic annotation /// 0045595 // regulation of cell differentiation // inferred from electronic annotation /// 0045597 // positive regulation of cell differentiation // inferred from electronic annotation /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048468 // cell development // inferred from electronic annotation /// 0048565 // digestive tract development // inferred from electronic annotation /// 0048665 // neuron fate specification // inferred from electronic annotation /// 0048708 // astrocyte differentiation // inferred from electronic annotation /// 0048714 // positive regulation of oligodendrocyte differentiation // inferred from electronic annotation /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from sequence or structural similarity /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0060580 // ventral spinal cord interneuron fate determination // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0044424 // intracellular part // inferred from electronic annotation","0001159 // core promoter proximal region DNA binding // inferred from sequence or structural similarity /// 0001159 // core promoter proximal region DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from sequence or structural similarity /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from sequence or structural similarity /// 0003713 // transcription coactivator activity // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr20:21491647-21494664 (-) // 90.42 // p11.22"]
["11747004_a_at",0.008471966,0.21037245,6.456375E-4,-6.456375E-4,-0.114444256,-0.06069565,0.54270214,0.1584464,1.0956284,0.13175854,1.0956284,"up","SUOX",6821.0,"0000096 // sulfur amino acid metabolic process // traceable author statement /// 0000098 // sulfur amino acid catabolic process // traceable author statement /// 0006790 // sulfur compound metabolic process // inferred from electronic annotation /// 0007584 // response to nutrient // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0070221 // sulfide oxidation, using sulfide:quinone oxidoreductase // traceable author statement","0005739 // mitochondrion // inferred from electronic annotation /// 0005758 // mitochondrial intermembrane space // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation","0008482 // sulfite oxidase activity // traceable author statement /// 0008482 // sulfite oxidase activity // inferred from electronic annotation /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0020037 // heme binding // inferred from electronic annotation /// 0030151 // molybdenum ion binding // inferred from electronic annotation /// 0043546 // molybdopterin cofactor binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:56395217-56398842 (+) // 86.65 // q13.2"]
["11718167_s_at",0.008945465,-0.0063114166,0.030067444,-0.002409935,-0.06161976,0.002409935,0.62854064,0.24566464,1.022032,0.0314404,1.022032,"up","PRDM4",11108.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0030308 // negative regulation of cell growth // inferred from electronic annotation /// 0031670 // cellular response to nutrient // inferred from electronic annotation /// 0045786 // negative regulation of cell cycle // traceable author statement /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0005123 // death receptor binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008270 // zinc ion binding // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:108126642-108154937 (-) // 98.66 // q23.3"]
["11755202_a_at",-0.12138724,-0.06750703,0.0010738373,0.11838031,0.14371538,-0.0010740757,0.38128227,0.058498636,-1.1092726,-0.14961395,1.1092726,"down","VTCN1",79679.0,"0050868 // negative regulation of T cell activation // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005102 // receptor binding // inferred from electronic annotation","chr1:117686212-117712794 (-) // 81.62 // p13.1"]
["11728128_a_at",-0.04463625,0.012878418,-0.0971055,0.042352676,-0.012878418,0.07995415,0.50321054,0.12924403,-1.0566009,-0.07943058,1.0566009,"down","APTX",54840.0,"0000012 // single strand break repair // inferred from direct assay /// 0000012 // single strand break repair // inferred from electronic annotation /// 0006266 // DNA ligation // inferred from electronic annotation /// 0006281 // DNA repair // inferred from electronic annotation /// 0006302 // double-strand break repair // inferred from direct assay /// 0006974 // response to DNA damage stimulus // inferred from mutant phenotype /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0031647 // regulation of protein stability // inferred from mutant phenotype /// 0042542 // response to hydrogen peroxide // inferred from direct assay","0000785 // chromatin // inferred from direct assay /// 0000790 // nuclear chromatin // inferred from direct assay /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from direct assay /// 0003684 // damaged DNA binding // inferred from direct assay /// 0003690 // double-stranded DNA binding // inferred from direct assay /// 0003725 // double-stranded RNA binding // inferred from direct assay /// 0003824 // catalytic activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008967 // phosphoglycolate phosphatase activity // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0033699 // DNA 5'-adenosine monophosphate hydrolase activity // inferred from direct assay /// 0033699 // DNA 5'-adenosine monophosphate hydrolase activity // inferred from electronic annotation /// 0046403 // polynucleotide 3'-phosphatase activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from physical interaction /// 0051219 // phosphoprotein binding // inferred from physical interaction","chr9:32972613-32990086 (-) // 93.36 // p21.1"]
["11742975_x_at",0.09181595,0.032952785,0.014442921,-0.15102053,-0.09250927,-0.014442921,0.34714153,0.04488699,1.0961117,0.13239476,1.0961117,"up","USP42",84132.0,"0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0016579 // protein deubiquitination // inferred from sequence or structural similarity /// 0016579 // protein deubiquitination // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation","","0004221 // ubiquitin thiolesterase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr7:6144549-6201194 (+) // 99.03 // p22.1"]
["11727849_a_at",0.06863785,-0.001991272,0.05316925,-0.052960396,0.001991272,-0.08493233,0.39064598,0.062264517,1.0608635,0.08523903,1.0608635,"up","NIP7",51388.0,"0042254 // ribosome biogenesis // inferred from electronic annotation /// 0042255 // ribosome assembly // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr16:69373330-69377009 (+) // 81.89 // q22.1"]
["11756839_x_at",-0.078305244,-0.10461712,-0.04145527,0.07463169,0.04145527,0.08266544,0.13186623,0.0031660518,-1.1027023,-0.1410433,1.1027023,"down","ZC3HAV1",56829.0,"0009615 // response to virus // inferred from electronic annotation /// 0032481 // positive regulation of type I interferon production // inferred from electronic annotation /// 0050691 // regulation of defense response to virus by host // inferred from electronic annotation /// 0071360 // cellular response to exogenous dsRNA // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003950 // NAD+ ADP-ribosyltransferase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:138745087-138764013 (-) // 88.78 // q34"]
["11724179_a_at",-0.31482267,-0.024696827,0.056489468,0.024696827,0.16305828,-0.11363363,0.7627118,0.43738386,-1.0860199,-0.1190505,1.0860199,"down","DNAJB5",25822.0,"0006457 // protein folding // inferred from electronic annotation /// 0006986 // response to unfolded protein // inferred from expression pattern","0005634 // nucleus // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0031072 // heat shock protein binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // inferred from electronic annotation","chr9:34990230-34998425 (+) // 98.54 // p13.3"]
["11746127_a_at",-0.047831535,0.042431355,-0.2843423,0.0077443123,-0.0077443123,0.07120323,0.66850483,0.2968334,-1.0869724,-0.12031525,1.0869724,"down","CLPTM1",1209.0,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0007275 // multicellular organismal development // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0033081 // regulation of T cell differentiation in thymus // inferred from sequence or structural similarity /// 0033081 // regulation of T cell differentiation in thymus // inferred from electronic annotation","0005887 // integral to plasma membrane // traceable author statement /// 0009897 // external side of plasma membrane // inferred from sequence or structural similarity /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr19:45458249-45496530 (+) // 96.91 // q13.32"]
["11760820_at",-0.12783861,0.028166294,0.078911066,-0.028166294,-0.057308912,0.028578281,0.9565974,0.8663118,1.0083841,0.0120452875,1.0083841,"up","IDS",3423.0,"0008152 // metabolic process // inferred from electronic annotation","0005764 // lysosome // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004423 // iduronate-2-sulfatase activity // inferred from electronic annotation /// 0004423 // iduronate-2-sulfatase activity // traceable author statement /// 0008484 // sulfuric ester hydrolase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chrX:148568662-148593154 (-) // 82.9 // q28"]
["11718187_a_at",0.004460335,-0.004460335,-0.06497097,0.01681614,0.08831406,-0.024090767,0.65877444,0.28461194,-1.034311,-0.048670124,1.034311,"down","BNIP1",662.0,"0006810 // transport // inferred from electronic annotation /// 0006914 // autophagy // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from physical interaction /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // traceable author statement /// 0006917 // induction of apoptosis // inferred from mutant phenotype /// 0007029 // endoplasmic reticulum organization // inferred from mutant phenotype /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0016320 // endoplasmic reticulum membrane fusion // inferred from mutant phenotype","0005635 // nuclear envelope // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030176 // integral to endoplasmic reticulum membrane // traceable author statement /// 0031201 // SNARE complex // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr5:172571444-172591390 (+) // 98.65 // q35.1"]
["11722906_a_at",-0.033997536,-0.044505596,0.09702206,-0.024638653,0.02463913,0.035215378,0.9733205,0.9152456,-1.0038652,-0.0055656163,1.0038652,"down","MIA3",375056.0,"0002687 // positive regulation of leukocyte migration // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006887 // exocytosis // inferred from mutant phenotype /// 0006887 // exocytosis // inferred from electronic annotation /// 0007162 // negative regulation of cell adhesion // inferred from direct assay /// 0015031 // protein transport // inferred from mutant phenotype /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // inferred from direct assay /// 0042060 // wound healing // inferred from direct assay","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr1:222791443-222841513 (+) // 99.64 // q41"]
["11751213_s_at",0.108260155,0.046505928,0.014862061,-0.10824299,-0.014862061,-0.10774708,0.30718952,0.032198865,1.0969467,0.13349345,1.0969467,"up","SCOC",60592.0,"0016239 // positive regulation of macroautophagy // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005768 // endosome // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr4:141300272-141303304 (+) // 89.82 // q31.1"]
["11762808_at",-0.058069706,0.06720829,-0.117444515,0.17248917,-0.07487202,0.058069706,0.7278031,0.38277733,-1.0628939,-0.08799755,1.0628939,"down","MPZL1",9019.0,"0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement","0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005198 // structural molecule activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr1:167691232-167743131 (+) // 80.63 // q24.2"]
["11755213_a_at",0.0027656555,0.0110292435,0.015796661,-0.028629303,-0.077363014,-0.0027656555,0.46961913,0.106322005,1.0324819,0.0461165,1.0324819,"up","KIAA1522",57648.0,"","","","chr1:33231267-33240571 (+) // 99.28 // p35.1"]
["11730065_at",-0.15572357,-0.027691126,0.027691126,0.13734746,0.034923553,-0.18991375,0.89086884,0.6993282,-1.0324178,-0.046026886,1.0324178,"down","TIGD7",91151.0,"","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation","chr16:3348829-3351400 (-) // 85.37 // p13.3"]
["11729063_a_at",-0.027639389,0.01701355,-0.10270882,0.09286785,-0.01701355,0.03727436,0.5708728,0.1848821,-1.0537173,-0.0754878,1.0537173,"down","PDGFA",5154.0,"0001525 // angiogenesis // inferred from sequence or structural similarity /// 0001525 // angiogenesis // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001775 // cell activation // traceable author statement /// 0001942 // hair follicle development // inferred from sequence or structural similarity /// 0001942 // hair follicle development // inferred from electronic annotation /// 0002053 // positive regulation of mesenchymal cell proliferation // inferred from sequence or structural similarity /// 0002053 // positive regulation of mesenchymal cell proliferation // inferred from electronic annotation /// 0002576 // platelet degranulation // traceable author statement /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0007267 // cell-cell signaling // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0009611 // response to wounding // inferred from direct assay /// 0009790 // embryo development // traceable author statement /// 0009887 // organ morphogenesis // inferred from sequence or structural similarity /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0010035 // response to inorganic substance // inferred from electronic annotation /// 0010512 // negative regulation of phosphatidylinositol biosynthetic process // inferred from direct assay /// 0010544 // negative regulation of platelet activation // inferred from direct assay /// 0014068 // positive regulation of phosphatidylinositol 3-kinase cascade // inferred from direct assay /// 0014910 // regulation of smooth muscle cell migration // inferred from direct assay /// 0030031 // cell projection assembly // inferred from sequence or structural similarity /// 0030031 // cell projection assembly // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from sequence or structural similarity /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0031954 // positive regulation of protein autophosphorylation // inferred from direct assay /// 0032355 // response to estradiol stimulus // inferred from electronic annotation /// 0032526 // response to retinoic acid // inferred from electronic annotation /// 0032956 // regulation of actin cytoskeleton organization // traceable author statement /// 0035793 // positive regulation of metanephric mesenchymal cell migration by platelet-derived growth factor receptor-beta signaling pathway // inferred from direct assay /// 0042060 // wound healing // traceable author statement /// 0042060 // wound healing // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0043406 // positive regulation of MAP kinase activity // inferred from direct assay /// 0043410 // positive regulation of MAPK cascade // inferred from mutant phenotype /// 0043588 // skin development // inferred from sequence or structural similarity /// 0043588 // skin development // inferred from electronic annotation /// 0045740 // positive regulation of DNA replication // inferred from direct assay /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from direct assay /// 0048146 // positive regulation of fibroblast proliferation // inferred from direct assay /// 0048286 // lung alveolus development // inferred from sequence or structural similarity /// 0048286 // lung alveolus development // inferred from electronic annotation /// 0048839 // inner ear development // inferred from electronic annotation /// 0050730 // regulation of peptidyl-tyrosine phosphorylation // inferred from sequence or structural similarity /// 0050730 // regulation of peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0050919 // negative chemotaxis // inferred from direct assay /// 0051781 // positive regulation of cell division // inferred from electronic annotation /// 0051897 // positive regulation of protein kinase B signaling cascade // inferred from direct assay /// 0060683 // regulation of branching involved in salivary gland morphogenesis by epithelial-mesenchymal signaling // inferred from sequence or structural similarity /// 0060683 // regulation of branching involved in salivary gland morphogenesis by epithelial-mesenchymal signaling // inferred from electronic annotation /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from direct assay /// 0072124 // regulation of glomerular mesangial cell proliferation // inferred from direct assay /// 2000278 // regulation of DNA biosynthetic process // inferred from direct assay","0000139 // Golgi membrane // traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0005902 // microvillus // inferred from sequence or structural similarity /// 0005902 // microvillus // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0031093 // platelet alpha granule lumen // traceable author statement","0005161 // platelet-derived growth factor receptor binding // inferred from direct assay /// 0005161 // platelet-derived growth factor receptor binding // inferred from physical interaction /// 0005518 // collagen binding // inferred from direct assay /// 0008083 // growth factor activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0043498 // cell surface binding // inferred from direct assay /// 0043499 // eukaryotic cell surface binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from physical interaction /// 0048407 // platelet-derived growth factor binding // inferred from physical interaction","chr7:536898-559481 (-) // 88.1 // p22.3"]
["11761388_at",0.11254501,-0.027160168,-0.15430355,-0.25292778,0.027160168,0.07874918,0.9504583,0.84953713,1.0182086,0.026033187,1.0182086,"up","COQ2",27235.0,"0006071 // glycerol metabolic process // inferred from genetic interaction /// 0006744 // ubiquinone biosynthetic process // inferred from direct assay /// 0006744 // ubiquinone biosynthetic process // inferred from electronic annotation /// 0008299 // isoprenoid biosynthetic process // inferred from electronic annotation /// 0009058 // biosynthetic process // inferred from electronic annotation","0005739 // mitochondrion // inferred from reviewed computational analysis /// 0005739 // mitochondrion // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from reviewed computational analysis /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation","0002083 // 4-hydroxybenzoate decaprenyltransferase activity // inferred from electronic annotation /// 0004659 // prenyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0047293 // 4-hydroxybenzoate nonaprenyltransferase activity // inferred from electronic annotation","chr4:84182688-84205948 (-) // 81.69 // q21.23"]
["11750288_x_at",-0.013962746,0.013962746,-0.03101778,0.21948004,0.013977528,-0.13344479,0.88871795,0.6938279,-1.0307374,-0.043676823,1.0307374,"down","DYX1C1",161582.0,"0001764 // neuron migration // inferred from sequence or structural similarity /// 0001764 // neuron migration // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0033146 // regulation of intracellular estrogen receptor signaling pathway // inferred from direct assay /// 0061136 // regulation of proteasomal protein catabolic process // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0030331 // estrogen receptor binding // inferred from direct assay /// 0030331 // estrogen receptor binding // inferred from electronic annotation","chr15:55727101-55790546 (-) // 59.95 // q21.3"]
["11755839_x_at",0.17853475,0.07473612,0.49853396,-0.07473636,-0.13217211,-0.12494707,0.3573585,0.048597474,1.2845118,0.36122015,1.2845118,"up","KIAA1244",57221.0,"0010923 // negative regulation of phosphatase activity // inferred from direct assay /// 0016192 // vesicle-mediated transport // not recorded /// 0032012 // regulation of ARF protein signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005802 // trans-Golgi network // not recorded /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005086 // ARF guanyl-nucleotide exchange factor activity // not recorded /// 0005086 // ARF guanyl-nucleotide exchange factor activity // inferred from electronic annotation","chr6:138655488-138659955 (+) // 89.49 // q23.3"]
["11716797_s_at",-0.0024499893,0.002128601,0.05275345,-0.0037794113,0.04468441,-0.002128601,0.9531319,0.8574912,1.0031601,0.0045518996,1.0031601,"up","LBR",3930.0,"0006695 // cholesterol biosynthetic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // traceable author statement /// 0005637 // nuclear inner membrane // inferred from electronic annotation /// 0005639 // integral to nuclear inner membrane // traceable author statement /// 0005643 // nuclear pore // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005521 // lamin binding // traceable author statement /// 0016628 // oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0070087 // chromo shadow domain binding // inferred from physical interaction","chr1:225589203-225615781 (-) // 98.03 // q42.12"]
["11739323_a_at",0.033295155,0.016082287,-0.21208668,-0.013284683,-0.09637022,0.013284683,0.9363405,0.80911857,-1.0154456,-0.022112938,1.0154456,"down","WDR4",10785.0,"0006400 // tRNA modification // inferred from direct assay /// 0008033 // tRNA processing // inferred from electronic annotation /// 0036265 // RNA (guanine-N7)-methylation // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008176 // tRNA (guanine-N7-)-methyltransferase activity // inferred from direct assay","chr21:44269070-44299685 (-) // 86.6 // q22.3"]
["11728501_a_at",0.050792217,-0.07890463,-0.12309122,-0.050792217,0.14295816,0.13135862,0.58673805,0.20059207,-1.0904392,-0.124909334,1.0904392,"down","LRRN2",10446.0,"0007155 // cell adhesion // traceable author statement /// 0007165 // signal transduction // traceable author statement","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // traceable author statement","chr1:204586300-204654930 (-) // 98.71 // q32.1"]
["11747870_a_at",0.0063323975,-0.024486542,0.08431053,-0.036644936,0.014010429,-0.0063323975,0.7547367,0.42300412,1.0222214,0.031707764,1.0222214,"up","MLLT3",4300.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007379 // segment specification // inferred from electronic annotation /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from direct assay /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from genetic interaction /// 2000096 // positive regulation of Wnt receptor signaling pathway, planar cell polarity pathway // inferred from genetic interaction","0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement","0005515 // protein binding // inferred from physical interaction","chr9:20346196-20621883 (-) // 90.85 // p21.3"]
["11753277_a_at",-0.038311005,0.023568869,-0.034036875,0.20229602,-0.023568869,0.14346266,0.5370054,0.15443186,-1.0894926,-0.12365634,1.0894926,"down","AKR1E2",83592.0,"0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0016491 // oxidoreductase activity // inferred from electronic annotation /// 0050571 // 1,5-anhydro-D-fructose reductase activity // inferred from electronic annotation","chr10:4868487-4889937 (+) // 97.2 // p15.1"]
["11752283_a_at",0.0,0.024350882,0.23556328,0.0,-0.2288506,-0.062269688,0.5236023,0.14399461,1.1357758,0.18367808,1.1357758,"up","ALOX15B",247.0,"0006629 // lipid metabolic process // traceable author statement /// 0006631 // fatty acid metabolic process // traceable author statement /// 0006691 // leukotriene metabolic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0019370 // leukotriene biosynthetic process // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // traceable author statement /// 0030850 // prostate gland development // non-traceable author statement /// 0030856 // regulation of epithelial cell differentiation // non-traceable author statement /// 0045786 // negative regulation of cell cycle // inferred from direct assay /// 0045926 // negative regulation of growth // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005622 // intracellular // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0005506 // iron ion binding // inferred from electronic annotation /// 0016165 // lipoxygenase activity // inferred from electronic annotation /// 0016165 // lipoxygenase activity // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016702 // oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050473 // arachidonate 15-lipoxygenase activity // inferred from direct assay /// 0050473 // arachidonate 15-lipoxygenase activity // inferred from electronic annotation","chr17:7942351-7952162 (+) // 99.83 // p13.1"]
["11743009_x_at",-0.086280346,-0.021689892,0.03033638,0.011011124,0.018863678,-0.011011124,0.74518746,0.4087981,-1.022546,-0.032165818,1.022546,"down","ARHGEF1",9138.0,"0007266 // Rho protein signal transduction // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0038032 // termination of G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0050770 // regulation of axonogenesis // traceable author statement /// 0050771 // negative regulation of axonogenesis // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // traceable author statement /// 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation","chr19:42388357-42411597 (+) // 96.03 // q13.2"]
["11742077_at",0.11105752,-0.0042374134,-0.25087237,0.0042374134,0.051636457,-0.040032864,0.871583,0.6532946,-1.037634,-0.05329768,1.037634,"down","CHRNG",1146.0,"0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006936 // muscle contraction // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007268 // synaptic transmission // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0005892 // acetylcholine-gated channel complex // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004889 // acetylcholine-activated cation-selective channel activity // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005230 // extracellular ligand-gated ion channel activity // inferred from electronic annotation /// 0015267 // channel activity // traceable author statement /// 0015276 // ligand-gated ion channel activity // inferred from electronic annotation /// 0015464 // acetylcholine receptor activity // traceable author statement","chr2:233404436-233412546 (+) // 88.91 // q37.1"]
["11733067_at",0.10400486,0.0693593,0.18185902,-0.11525726,-0.069358826,-0.08686018,0.14648667,0.004321802,1.1558064,0.2088998,1.1558064,"up","NFYB",4801.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0016602 // CCAAT-binding factor complex // inferred from direct assay","0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0070491 // repressing transcription factor binding // inferred from physical interaction","chr12:104510857-104532067 (-) // 77.06 // q23.3"]
["11735358_at",0.13782644,-0.0043377876,0.055535316,0.0043377876,-0.20686007,-0.03488493,0.5158838,0.13802025,1.1035436,0.14214368,1.1035436,"up","VAX2",25806.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007398 // ectoderm development // traceable author statement /// 0007409 // axonogenesis // inferred from electronic annotation /// 0007601 // visual perception // traceable author statement /// 0009950 // dorsal/ventral axis specification // inferred from electronic annotation /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0030900 // forebrain development // inferred from sequence or structural similarity /// 0030900 // forebrain development // inferred from electronic annotation /// 0043010 // camera-type eye development // inferred from electronic annotation /// 0048048 // embryonic eye morphogenesis // inferred from electronic annotation /// 0060041 // retina development in camera-type eye // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0000976 // transcription regulatory region sequence-specific DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0031490 // chromatin DNA binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr2:71127719-71160576 (+) // 95.02 // p13.3"]
["11745152_x_at",-0.09176922,-0.038208008,0.003170967,-0.003170967,0.038809776,0.05164528,0.4418296,0.09016953,-1.0507092,-0.0713635,1.0507092,"down","ARFGAP1",55738.0,"0006810 // transport // inferred from electronic annotation /// 0006890 // retrograde vesicle-mediated transport, Golgi to ER // traceable author statement /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016044 // cellular membrane organization // traceable author statement /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0032312 // regulation of ARF GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from direct assay /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0048205 // COPI coating of Golgi vesicle // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0030660 // Golgi-associated vesicle membrane // traceable author statement","0005096 // GTPase activator activity // inferred from direct assay /// 0005096 // GTPase activator activity // inferred from electronic annotation /// 0008060 // ARF GTPase activator activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr20:61904184-61921140 (+) // 99.06 // q13.33"]
["11745992_a_at",-0.009388924,-0.009388924,0.03390789,-0.10773754,0.063035965,0.009388924,0.91985273,0.76456064,1.0117229,0.016814237,1.0117229,"up","ATG5",9474.0,"0000045 // autophagic vacuole assembly // inferred from sequence or structural similarity /// 0000045 // autophagic vacuole assembly // inferred from electronic annotation /// 0001974 // blood vessel remodeling // inferred from electronic annotation /// 0006914 // autophagy // inferred from electronic annotation /// 0006914 // autophagy // inferred from sequence or structural similarity /// 0006915 // apoptotic process // inferred from electronic annotation /// 0031397 // negative regulation of protein ubiquitination // inferred from electronic annotation /// 0032480 // negative regulation of type I interferon production // traceable author statement /// 0042311 // vasodilation // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043687 // post-translational protein modification // inferred from sequence or structural similarity /// 0043687 // post-translational protein modification // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0048840 // otolith development // inferred from electronic annotation /// 0055015 // ventricular cardiac muscle cell development // inferred from electronic annotation /// 0060047 // heart contraction // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005776 // autophagic vacuole // inferred from direct assay /// 0005776 // autophagic vacuole // inferred from electronic annotation /// 0034045 // pre-autophagosomal structure membrane // inferred from sequence or structural similarity /// 0034045 // pre-autophagosomal structure membrane // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr6:106632365-106773695 (-) // 95.77 // q21"]
["11758775_at",0.08209896,0.032124996,0.123776436,-0.058066368,-0.09555149,-0.032124996,0.2111537,0.011892491,1.1028585,0.14124775,1.1028585,"up","SRPRB",58477.0,"0006412 // translation // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation","chr3:133502876-133540336 (+) // 90.35 // q22.1"]
["11739057_a_at",0.019928932,0.0052690506,0.10402775,-0.0052690506,-0.07705784,-0.02817154,0.45682687,0.09914278,1.0569507,0.079908065,1.0569507,"up","NFE2L2",4780.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0030194 // positive regulation of blood coagulation // inferred from electronic annotation /// 0030968 // endoplasmic reticulum unfolded protein response // inferred from electronic annotation /// 0034599 // cellular response to oxidative stress // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0045995 // regulation of embryonic development // inferred from electronic annotation /// 2000121 // regulation of removal of superoxide radicals // inferred from electronic annotation /// 2000379 // positive regulation of reactive oxygen species metabolic process // inferred from electronic annotation","0000785 // chromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay","0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation","chr2:178095035-178129057 (-) // 98.88 // q31.2"]
["11763024_a_at",-0.14492702,0.01580143,-0.01580143,0.33524013,-0.075913906,0.30752873,0.55304044,0.16887355,-1.1787524,-0.23726073,1.1787524,"down","OFCC1",266553.0,"","0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","","chr6:9769163-9939582 (-) // 84.75 // p24.3"]
["11718148_a_at",0.027303696,-0.034454346,0.31107998,-0.060370445,0.14659119,-0.027303696,0.8227601,0.5468934,1.0582429,0.08167083,1.0582429,"up","APH1A",51107.0,"0001656 // metanephros development // inferred from electronic annotation /// 0006509 // membrane protein ectodomain proteolysis // inferred from direct assay /// 0006915 // apoptotic process // traceable author statement /// 0007219 // Notch signaling pathway // traceable author statement /// 0007219 // Notch signaling pathway // inferred from electronic annotation /// 0007220 // Notch receptor processing // inferred from mutant phenotype /// 0007220 // Notch receptor processing // traceable author statement /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0016485 // protein processing // inferred from direct assay /// 0016485 // protein processing // inferred from electronic annotation /// 0031293 // membrane protein intracellular domain proteolysis // inferred from mutant phenotype /// 0031293 // membrane protein intracellular domain proteolysis // traceable author statement /// 0042987 // amyloid precursor protein catabolic process // inferred from mutant phenotype /// 0042987 // amyloid precursor protein catabolic process // traceable author statement /// 0043085 // positive regulation of catalytic activity // inferred from direct assay /// 0043085 // positive regulation of catalytic activity // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation","0004175 // endopeptidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr1:150237803-150241532 (-) // 96.1 // q21.2"]
["11748951_a_at",0.013596535,-0.09388733,0.056754112,0.0071144104,-0.0071144104,-0.02506733,0.99736744,0.9916353,1.0003537,5.101823E-4,1.0003537,"up","CTNNB1",1499.0,{"$cut":{"chars":18470,"head":"0000122 // negative regulation of transcription from RNA polymerase II promoter // not recorded /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0000578 // embryonic axis specification // not recorded /// 0000578 // embryonic axis specification // inferred from electronic annotation /// 0000904 // cell morphogenesis involved in differentiation // inferred from electronic annotation /// 0001501 // skeletal system development // inferred from electronic annotation /// 0001569 // patterning of blood vessels // not recorded /// 0001569 // patterning of blood vessels // inferred by curator /// 0001569 // patterning of blood vessels // inferred from electronic annotation /// 0001570 // vasculogenesis // inferred from electronic annotation /// 0001658 // branching involved in ureteric bud morphogenesis // not recorded /// 0001658 // branching involved in ureteric bud morphogenesis // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001702 // gastrulation with mouth forming second // not recorded /// 0001702 // gastrulation with mouth forming second // inferred from electronic annotation /// 0001706 // endoderm formation // inferred from electronic annotation /// 0001708 // cell fate specification // inferred from electronic annotation /// 0001709 // cell fate determination // inferred from electronic annotation /// 0001711 // endodermal cell fate commitment // not recorded /// 0001711 // endodermal cell fate commitment // inferred from electronic annotation /// 0001822 // kidney development // inferred from electronic annotation /// 0001837 // epithelial to mesenchymal transition // traceable author statement /// 0001889 // liver development // not recorded /// 0001889 // liver development // inferred from electronic annotation /// 0002053 // positive regulation of mesenchymal cell proliferation // inferred from electronic annotation /// 0002089 // lens morphogenesis in camera-type eye // inferred from electronic annotation /// 0003136 // negative regulation of heart induction by canonical Wnt receptor signaling pathway // not recorded /// 0003266 // regulation of secondary heart field cardioblast proliferation // inferred from electronic annotation /// 0003337 // mesenchymal to epithelial transition involved in metanephros morphogenesis // not recorded /// 0003337 // mesenchymal to epithelial transition involved in metanephros morphogenesis // inferred from electronic annotation /// 0003338 // metanephros morphogenesis // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006921 // cellular component disassembly involved in apoptotic process // traceable author statement /// 0007016 // cytoskeletal anchoring at plasma membrane // not recorded /// 0007155 // cell adhesion // inferred from mutant phenotype /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007160 // cell-matrix adhesion // not recorded /// 0007160 // cell-matrix adhesion // inferred from electronic annotation /// 0007268 // synaptic transmission // inferred from electronic annotation /// 0007398 // ectoderm development // not recorded /// 0007398 // ectoderm development // inferred from electronic annotation /// 0007403 // glial cell fate determination // not recorded /// 0007403 // glial cell fate determination // inferred from electronic annotation /// 0007494 // midgut development // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from electronic annotation /// 0008284 /"}},"0000922 // spindle pole // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from direct assay /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005813 // centrosome // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from direct assay /// 0005911 // cell-cell junction // inferred from electronic annotation /// 0005912 // adherens junction // inferred from direct assay /// 0005912 // adherens junction // inferred from electronic annotation /// 0005913 // cell-cell adherens junction // inferred from direct assay /// 0005913 // cell-cell adherens junction // inferred from electronic annotation /// 0005915 // zonula adherens // not recorded /// 0005916 // fascia adherens // not recorded /// 0005916 // fascia adherens // inferred from electronic annotation /// 0005924 // cell-substrate adherens junction // inferred from direct assay /// 0005938 // cell cortex // inferred from direct assay /// 0009898 // internal side of plasma membrane // not recorded /// 0016020 // membrane // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0016328 // lateral plasma membrane // inferred from direct assay /// 0016328 // lateral plasma membrane // inferred from electronic annotation /// 0016342 // catenin complex // inferred from direct assay /// 0030018 // Z disc // not recorded /// 0030018 // Z disc // inferred from electronic annotation /// 0030027 // lamellipodium // not recorded /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030054 // cell junction // inferred from direct assay /// 0030054 // cell junction // traceable author statement /// 0030054 // cell junction // inferred from electronic annotation /// 0030057 // desmosome // not recorded /// 0031253 // cell projection membrane // inferred from electronic annotation /// 0031528 // microvillus membrane // not recorded /// 0031528 // microvillus membrane // inferred from electronic annotation /// 0032993 // protein-DNA complex // inferred from direct assay /// 0034742 // APC-Axin-1-beta-catenin complex // inferred from direct assay /// 0034747 // Axin-APC-beta-catenin-GSK3B complex // inferred from direct assay /// 0034747 // Axin-APC-beta-catenin-GSK3B complex // inferred from electronic annotation /// 0034750 // Scrib-APC-beta-catenin complex // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043198 // dendritic shaft // not recorded /// 0043198 // dendritic shaft // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0043296 // apical junction complex // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from electronic annotation /// 0045202 // synapse // not recorded /// 0045202 // synapse // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0070369 // beta-catenin-TCF7L2 complex // inferred from direct assay /// 0071944 // cell periphery // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from mutant phenotype /// 0003713 // transcription coactivator activity // inferred from electronic annotation /// 0004871 // signal transducer activity // non-traceable author statement /// 0005198 // structural molecule activity // not recorded /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008134 // transcription factor binding // traceable author statement /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0019900 // kinase binding // inferred from physical interaction /// 0019901 // protein kinase binding // not recorded /// 0019903 // protein phosphatase binding // inferred from physical interaction /// 0019903 // protein phosphatase binding // inferred from electronic annotation /// 0030331 // estrogen receptor binding // inferred from physical interaction /// 0035255 // ionotropic glutamate receptor binding // inferred from electronic annotation /// 0035257 // nuclear hormone receptor binding // inferred from physical interaction /// 0035257 // nuclear hormone receptor binding // traceable author statement /// 0042153 // RPTP-like protein binding // not recorded /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from electronic annotation /// 0044325 // ion channel binding // inferred from physical interaction /// 0045294 // alpha-catenin binding // inferred from physical interaction /// 0045294 // alpha-catenin binding // inferred from electronic annotation /// 0045296 // cadherin binding // inferred from physical interaction /// 0045296 // cadherin binding // inferred from electronic annotation /// 0046332 // SMAD binding // inferred from physical interaction /// 0050681 // androgen receptor binding // non-traceable author statement /// 0070411 // I-SMAD binding // inferred from physical interaction /// 0070412 // R-SMAD binding // inferred from physical interaction /// 0070491 // repressing transcription factor binding // inferred from electronic annotation","chr3:41236400-41281375 (+) // 98.36 // p22.1"]
["11716993_a_at",0.006450653,0.05138588,-0.006450653,0.023015022,-0.04618025,-0.008883953,0.70984954,0.35463786,1.0194646,0.027811697,1.0194646,"up","CSF1R",1436.0,"0001934 // positive regulation of protein phosphorylation // inferred from mutant phenotype /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006954 // inflammatory response // traceable author statement /// 0006954 // inflammatory response // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from sequence or structural similarity /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // traceable author statement /// 0008283 // cell proliferation // inferred from mutant phenotype /// 0008283 // cell proliferation // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008360 // regulation of cell shape // inferred from mutant phenotype /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // inferred from mutant phenotype /// 0030097 // hemopoiesis // inferred from mutant phenotype /// 0030224 // monocyte differentiation // traceable author statement /// 0030225 // macrophage differentiation // traceable author statement /// 0030316 // osteoclast differentiation // inferred from sequence or structural similarity /// 0030316 // osteoclast differentiation // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from sequence or structural similarity /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0031529 // ruffle organization // inferred from sequence or structural similarity /// 0031529 // ruffle organization // inferred from electronic annotation /// 0036006 // cellular response to macrophage colony-stimulating factor stimulus // inferred from mutant phenotype /// 0036006 // cellular response to macrophage colony-stimulating factor stimulus // inferred from electronic annotation /// 0038145 // macrophage colony-stimulating factor signaling pathway // inferred from mutant phenotype /// 0038145 // macrophage colony-stimulating factor signaling pathway // traceable author statement /// 0038145 // macrophage colony-stimulating factor signaling pathway // inferred from electronic annotation /// 0042517 // positive regulation of tyrosine phosphorylation of Stat3 protein // inferred from sequence or structural similarity /// 0042517 // positive regulation of tyrosine phosphorylation of Stat3 protein // inferred from electronic annotation /// 0045087 // innate immune response // inferred from electronic annotation /// 0045124 // regulation of bone resorption // inferred from sequence or structural similarity /// 0045217 // cell-cell junction maintenance // inferred from mutant phenotype /// 0046488 // phosphatidylinositol metabolic process // inferred from sequence or structural similarity /// 0046488 // phosphatidylinositol metabolic process // inferred from electronic annotation /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from electronic annotation /// 0048015 // phosphatidylinositol-mediated signaling // inferred from sequence or structural similarity /// 0048015 // phosphatidylinositol-mediated signaling // inferred from electronic annotation /// 0060603 // mammary gland duct morphogenesis // traceable author statement /// 0061098 // positive regulation of protein tyrosine kinase activity // inferred from mutant phenotype /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from sequence or structural similarity /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from electronic annotation /// 0071345 // cellular response to cytokine stimulus // inferred from sequence or structural similarity /// 0071345 // cellular response to cytokine stimulus // inferred from electronic annotation /// 0071902 // positive regulation of protein serine/threonine kinase activity // inferred from sequence or structural similarity /// 0071902 // positive regulation of protein serine/threonine kinase activity // inferred from electronic annotation /// 0090197 // positive regulation of chemokine secretion // inferred from mutant phenotype /// 2000147 // positive regulation of cell motility // inferred from mutant phenotype /// 2000249 // regulation of actin cytoskeleton reorganization // inferred from sequence or structural similarity /// 2000249 // regulation of actin cytoskeleton reorganization // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from sequence or structural similarity /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0043235 // receptor complex // inferred from sequence or structural similarity /// 0043235 // receptor complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005011 // macrophage colony-stimulating factor receptor activity // inferred from mutant phenotype /// 0005011 // macrophage colony-stimulating factor receptor activity // inferred from electronic annotation /// 0005011 // macrophage colony-stimulating factor receptor activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019955 // cytokine binding // inferred from direct assay /// 0019955 // cytokine binding // inferred from sequence or structural similarity /// 0019955 // cytokine binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from sequence or structural similarity /// 0042803 // protein homodimerization activity // inferred from electronic annotation","chr5:149432590-149492935 (-) // 96.39 // q32"]
["11723674_x_at",-0.062941074,0.005338669,-0.005338669,0.056280613,-0.034973145,0.11792278,0.625818,0.24275075,-1.0478196,-0.067390375,1.0478196,"down","PSEN2",5664.0,"0001666 // response to hypoxia // inferred from electronic annotation /// 0001708 // cell fate specification // inferred from electronic annotation /// 0001756 // somitogenesis // inferred from electronic annotation /// 0001933 // negative regulation of protein phosphorylation // inferred from electronic annotation /// 0001942 // hair follicle development // inferred from electronic annotation /// 0002244 // hemopoietic progenitor cell differentiation // inferred from electronic annotation /// 0002286 // T cell activation involved in immune response // inferred from electronic annotation /// 0002573 // myeloid leukocyte differentiation // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0006509 // membrane protein ectodomain proteolysis // inferred from direct assay /// 0006816 // calcium ion transport // not recorded /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // not recorded /// 0007176 // regulation of epidermal growth factor-activated receptor activity // inferred from electronic annotation /// 0007219 // Notch signaling pathway // traceable author statement /// 0007219 // Notch signaling pathway // inferred from electronic annotation /// 0007220 // Notch receptor processing // not recorded /// 0007220 // Notch receptor processing // traceable author statement /// 0007611 // learning or memory // inferred from electronic annotation /// 0007613 // memory // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0009790 // embryo development // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016485 // protein processing // inferred from direct assay /// 0016485 // protein processing // inferred from electronic annotation /// 0021904 // dorsal/ventral neural tube patterning // inferred from electronic annotation /// 0030326 // embryonic limb morphogenesis // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation /// 0031293 // membrane protein intracellular domain proteolysis // traceable author statement /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0040011 // locomotion // inferred from electronic annotation /// 0042640 // anagen // inferred from electronic annotation /// 0042987 // amyloid precursor protein catabolic process // not recorded /// 0042987 // amyloid precursor protein catabolic process // traceable author statement /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043085 // positive regulation of catalytic activity // inferred from direct assay /// 0044267 // cellular protein metabolic process // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048167 // regulation of synaptic plasticity // inferred from electronic annotation /// 0048286 // lung alveolus development // inferred from electronic annotation /// 0048538 // thymus development // inferred from electronic annotation /// 0048854 // brain morphogenesis // inferred from electronic annotation /// 0050435 // beta-amyloid metabolic process // not recorded /// 0050435 // beta-amyloid metabolic process // inferred from electronic annotation /// 0050820 // positive regulation of coagulation // inferred from electronic annotation /// 0050852 // T cell receptor signaling pathway // inferred from electronic annotation /// 0051604 // protein maturation // inferred from electronic annotation /// 0060048 // cardiac muscle contraction // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0000776 // kinetochore // inferred from direct assay /// 0005622 // intracellular // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005637 // nuclear inner membrane // inferred from direct assay /// 0005743 // mitochondrial inner membrane // not recorded /// 0005765 // lysosomal membrane // not recorded /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0005938 // cell cortex // not recorded /// 0009986 // cell surface // not recorded /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // not recorded /// 0030018 // Z disc // not recorded /// 0030018 // Z disc // inferred from electronic annotation /// 0030424 // axon // not recorded /// 0030426 // growth cone // not recorded /// 0031594 // neuromuscular junction // not recorded /// 0035253 // ciliary rootlet // not recorded /// 0043025 // neuronal cell body // not recorded /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043198 // dendritic shaft // not recorded /// 0043234 // protein complex // inferred from direct assay /// 0045121 // membrane raft // not recorded /// 0048471 // perinuclear region of cytoplasm // not recorded","0004175 // endopeptidase activity // not recorded /// 0004175 // endopeptidase activity // inferred from electronic annotation /// 0004190 // aspartic-type endopeptidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr1:227058272-227084269 (+) // 92.45 // q42.13"]
["11743044_a_at",-0.12865877,-0.037080765,0.09492111,0.11831117,0.037080765,-0.09837556,0.87593234,0.66256624,-1.0299766,-0.04261157,1.0299766,"down","ALDH1A1",216.0,"0006069 // ethanol oxidation // traceable author statement /// 0006081 // cellular aldehyde metabolic process // traceable author statement /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0032320 // positive regulation of Ras GTPase activity // traceable author statement /// 0042572 // retinol metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0001758 // retinal dehydrogenase activity // inferred from electronic annotation /// 0004029 // aldehyde dehydrogenase (NAD) activity // not recorded /// 0004029 // aldehyde dehydrogenase (NAD) activity // traceable author statement /// 0005099 // Ras GTPase activator activity // traceable author statement /// 0005497 // androgen binding // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016620 // oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor // inferred from electronic annotation","chr9:75515586-75653638 (-) // 96.83 // q21.13"]
["11760701_x_at",-0.05008602,0.12402201,0.08240676,-0.11158085,0.05008602,-0.13189411,0.59476626,0.20891978,1.0841596,0.11657717,1.0841596,"up","LSAMP",4045.0,"0007155 // cell adhesion // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031225 // anchored to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr3:115528291-116163804 (-) // 79.83 // q13.31"]
["11724204_s_at",0.0032958984,-0.0032958984,0.018265724,-0.10553646,0.08545685,-0.083322525,0.8189074,0.54024506,1.0285101,0.04055595,1.0285101,"up","SNRPD1",6632.0,"0000245 // spliceosomal complex assembly // traceable author statement /// 0000387 // spliceosomal snRNP assembly // traceable author statement /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0034660 // ncRNA metabolic process // traceable author statement","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005689 // U12-type spliceosomal complex // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0030532 // small nuclear ribonucleoprotein complex // traceable author statement /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr18:19192227-19210414 (+) // 74.99 // q11.2"]
["11756599_a_at",0.03657341,-0.04442215,0.009861946,-0.009861946,-0.019863129,0.060167313,0.9323205,0.798102,-1.0065901,-0.009476353,1.0065901,"down","ANAPC16",119504.0,"0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005680 // anaphase-promoting complex // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","","chr10:73920573-73993393 (+) // 65.06 // q22.1"]
["11730004_a_at",0.100272894,0.055670977,-0.058491945,-0.055670977,0.10453367,-0.100761175,0.8287093,0.55898064,1.0351095,0.04978342,1.0351095,"up","SEMA4D",10507.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from direct assay /// 0006916 // anti-apoptosis // traceable author statement /// 0006955 // immune response // traceable author statement /// 0007155 // cell adhesion // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0008360 // regulation of cell shape // inferred from mutant phenotype /// 0010693 // negative regulation of alkaline phosphatase activity // inferred from mutant phenotype /// 0010693 // negative regulation of alkaline phosphatase activity // inferred from electronic annotation /// 0014068 // positive regulation of phosphatidylinositol 3-kinase cascade // inferred from mutant phenotype /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0030335 // positive regulation of cell migration // inferred from sequence or structural similarity /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0031344 // regulation of cell projection organization // inferred from mutant phenotype /// 0032321 // positive regulation of Rho GTPase activity // inferred from mutant phenotype /// 0032321 // positive regulation of Rho GTPase activity // inferred from sequence or structural similarity /// 0032321 // positive regulation of Rho GTPase activity // inferred from electronic annotation /// 0043931 // ossification involved in bone maturation // inferred from mutant phenotype /// 0043931 // ossification involved in bone maturation // inferred from electronic annotation /// 0045668 // negative regulation of osteoblast differentiation // inferred from sequence or structural similarity /// 0045668 // negative regulation of osteoblast differentiation // inferred from electronic annotation /// 0048672 // positive regulation of collateral sprouting // inferred from mutant phenotype /// 0048814 // regulation of dendrite morphogenesis // inferred from mutant phenotype /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from sequence or structural similarity /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0050732 // negative regulation of peptidyl-tyrosine phosphorylation // inferred from sequence or structural similarity /// 0050732 // negative regulation of peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0050772 // positive regulation of axonogenesis // inferred from electronic annotation /// 0061383 // trabecula morphogenesis // inferred from sequence or structural similarity /// 0061383 // trabecula morphogenesis // inferred from electronic annotation /// 0070486 // leukocyte aggregation // inferred from mutant phenotype /// 0071526 // semaphorin-plexin signaling pathway // inferred from mutant phenotype","0005615 // extracellular space // inferred from sequence or structural similarity /// 0005615 // extracellular space // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from direct assay /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from mutant phenotype /// 0005102 // receptor binding // inferred from direct assay /// 0005102 // receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0030215 // semaphorin receptor binding // inferred from sequence or structural similarity /// 0030215 // semaphorin receptor binding // inferred from electronic annotation","chr9:91975705-92070868 (-) // 94.33 // q22.2"]
["11761598_s_at",-0.052312136,-0.003301859,0.003301859,-0.04651761,0.1423068,0.14162683,0.60011566,0.21284394,-1.0692328,-0.09657603,1.0692328,"down","HEATR8",374977.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr1:55118561-55165896 (+) // 95.65 // p32.3"]
["11747790_a_at",-0.025350094,0.11105728,0.028343678,-0.09880686,-0.23947668,0.025350094,0.559405,0.17395355,1.1036847,0.14232804,1.1036847,"up","C22orf25",128989.0,"","0005739 // mitochondrion // inferred from electronic annotation","","chr22:20008650-20052360 (+) // 94.53 // q11.21"]
["11731680_a_at",0.05020666,0.02641201,-0.057477713,-0.039007187,-0.011865377,0.011865377,0.8551736,0.61709833,1.0135257,0.019382706,1.0135257,"up","NOX4",50507.0,"0000902 // cell morphogenesis // inferred from sequence or structural similarity /// 0000902 // cell morphogenesis // inferred from electronic annotation /// 0006954 // inflammatory response // traceable author statement /// 0007569 // cell aging // inferred from sequence or structural similarity /// 0007569 // cell aging // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from sequence or structural similarity /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0035051 // cardiac cell differentiation // inferred from electronic annotation /// 0042554 // superoxide anion generation // inferred from sequence or structural similarity /// 0042554 // superoxide anion generation // inferred from electronic annotation /// 0043406 // positive regulation of MAP kinase activity // inferred from electronic annotation /// 0045453 // bone resorption // inferred from electronic annotation /// 0050667 // homocysteine metabolic process // inferred from direct assay /// 0051897 // positive regulation of protein kinase B signaling cascade // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from electronic annotation /// 0071333 // cellular response to glucose stimulus // inferred from electronic annotation /// 0072593 // reactive oxygen species metabolic process // inferred from direct assay /// 0072593 // reactive oxygen species metabolic process // inferred from electronic annotation /// 2000573 // positive regulation of DNA biosynthetic process // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0071944 // cell periphery // inferred from electronic annotation","0000166 // nucleotide binding // traceable author statement /// 0009055 // electron carrier activity // traceable author statement /// 0016174 // NAD(P)H oxidase activity // traceable author statement /// 0016175 // superoxide-generating NADPH oxidase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0019826 // oxygen sensor activity // traceable author statement /// 0020037 // heme binding // traceable author statement /// 0050660 // flavin adenine dinucleotide binding // traceable author statement /// 0072341 // modified amino acid binding // inferred from direct assay","chr11:89057523-89225390 (-) // 73.38 // q14.3"]
["11742852_a_at",0.02133751,0.032175064,0.07194996,-0.03976059,-0.077225685,-0.02133751,0.24552573,0.017471869,1.0628432,0.08792878,1.0628432,"up","RPN1",6184.0,"0006412 // translation // traceable author statement /// 0006464 // cellular protein modification process // traceable author statement /// 0006486 // protein glycosylation // inferred from electronic annotation /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from sequence or structural similarity /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0008250 // oligosaccharyltransferase complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0019718 // rough microsome // inferred from sequence or structural similarity /// 0042470 // melanosome // inferred from electronic annotation","0004579 // dolichyl-diphosphooligosaccharide-protein glycotransferase activity // traceable author statement /// 0004579 // dolichyl-diphosphooligosaccharide-protein glycotransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr3:128338811-128369748 (-) // 95.85 // q21.3"]
["11718032_a_at",-0.073010445,0.07599878,-0.12568188,0.040403843,-0.02191925,0.021918774,0.7630344,0.43789324,-1.0384024,-0.054365676,1.0384024,"down","ATP6V0A1",535.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0015991 // ATP hydrolysis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport // inferred from electronic annotation /// 0033572 // transferrin transport // traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0000220 // vacuolar proton-transporting V-type ATPase, V0 domain // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0010008 // endosome membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0033177 // proton-transporting two-sector ATPase complex, proton-transporting domain // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0015078 // hydrogen ion transmembrane transporter activity // inferred from electronic annotation /// 0051117 // ATPase binding // inferred from physical interaction","chr17:40610862-40674597 (+) // 93.48 // q21.2"]
["11763766_x_at",0.1423862,-0.028129816,0.028129578,-0.11908078,0.037519455,-0.063388586,0.6167138,0.23145838,1.068642,0.09577865,1.068642,"up","STYXL1",51657.0,"0006470 // protein dephosphorylation // not recorded /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0035556 // intracellular signal transduction // traceable author statement","0005622 // intracellular // traceable author statement","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0008138 // protein tyrosine/serine/threonine phosphatase activity // not recorded /// 0008138 // protein tyrosine/serine/threonine phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr7:75633075-75677283 (-) // 43.87 // q11.23"]
["11716357_a_at",-0.09977627,0.1908102,-0.050616264,0.059957743,0.050616503,-0.18471408,0.9206772,0.76679295,1.0268219,0.038185902,1.0268219,"up","AHSG",197.0,"0001501 // skeletal system development // non-traceable author statement /// 0001503 // ossification // inferred from electronic annotation /// 0006907 // pinocytosis // non-traceable author statement /// 0006953 // acute-phase response // inferred from direct assay /// 0008584 // male gonad development // inferred from electronic annotation /// 0021987 // cerebral cortex development // inferred from electronic annotation /// 0030308 // negative regulation of cell growth // inferred from electronic annotation /// 0030500 // regulation of bone mineralization // non-traceable author statement /// 0030500 // regulation of bone mineralization // inferred from electronic annotation /// 0030502 // negative regulation of bone mineralization // inferred from sequence or structural similarity /// 0030502 // negative regulation of bone mineralization // inferred from electronic annotation /// 0031100 // organ regeneration // inferred from electronic annotation /// 0032869 // cellular response to insulin stimulus // inferred from electronic annotation /// 0042326 // negative regulation of phosphorylation // non-traceable author statement /// 0045780 // positive regulation of bone resorption // inferred from electronic annotation /// 0046627 // negative regulation of insulin receptor signaling pathway // non-traceable author statement /// 0046627 // negative regulation of insulin receptor signaling pathway // inferred from electronic annotation /// 0050727 // regulation of inflammatory response // inferred from mutant phenotype /// 0050766 // positive regulation of phagocytosis // inferred from direct assay","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // non-traceable author statement /// 0005615 // extracellular space // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0004869 // cysteine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0019210 // kinase inhibitor activity // non-traceable author statement /// 0030294 // receptor signaling protein tyrosine kinase inhibitor activity // inferred from electronic annotation","chr3:186330711-186339107 (+) // 85.14 // q27.3"]
["11735393_at",0.029182434,0.052032948,-0.2541833,-0.029182434,0.06535816,-0.04679203,0.8619725,0.6317467,-1.0382236,-0.05411722,1.0382236,"down","FMR1NB",158521.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chrX:147062852-147108188 (+) // 97.7 // q27.3"]
["11744831_a_at",-0.01198101,0.038726807,0.21743393,-0.022563934,-0.023281097,0.01198101,0.6383882,0.25919396,1.0663501,0.09268118,1.0663501,"up","RPAIN",84268.0,"0006261 // DNA-dependent DNA replication // inferred from physical interaction /// 0006281 // DNA repair // inferred from physical interaction /// 0006310 // DNA recombination // inferred from physical interaction /// 0006606 // protein import into nucleus // inferred from direct assay /// 0009411 // response to UV // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016605 // PML body // inferred from direct assay /// 0016605 // PML body // inferred from electronic annotation","0032403 // protein complex binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:5322960-5336205 (+) // 95.3 // p13.2"]
["11716148_a_at",-0.03613758,-0.040338993,-0.028075695,0.084909916,0.028075695,0.03033781,0.21223506,0.012004956,-1.0589433,-0.08262531,1.0589433,"down","TRAF3IP2",10758.0,"0035556 // intracellular signal transduction // non-traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from expression pattern","0005622 // intracellular // non-traceable author statement","0005515 // protein binding // inferred from physical interaction","chr6:111877460-111927477 (-) // 75.15 // q21"]
["11746339_a_at",-0.049620867,0.0734725,-0.22061372,-0.046698093,0.22398567,0.046698093,0.6673166,0.29501352,-1.1020955,-0.14024922,1.1020955,"down","MTSS1",9788.0,"0006928 // cellular component movement // non-traceable author statement /// 0007015 // actin filament organization // inferred from electronic annotation /// 0007155 // cell adhesion // non-traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // traceable author statement /// 0030035 // microspike assembly // non-traceable author statement /// 0030036 // actin cytoskeleton organization // traceable author statement /// 0030041 // actin filament polymerization // inferred from electronic annotation /// 0046847 // filopodium assembly // inferred from electronic annotation /// 0050680 // negative regulation of epithelial cell proliferation // inferred from sequence or structural similarity /// 0061333 // renal tubule morphogenesis // inferred from sequence or structural similarity /// 0071498 // cellular response to fluid shear stress // inferred from sequence or structural similarity /// 0072102 // glomerulus morphogenesis // inferred from sequence or structural similarity /// 0072160 // nephron tubule epithelial cell differentiation // inferred from sequence or structural similarity /// 2001013 // epithelial cell proliferation involved in renal tubule morphogenesis // inferred from sequence or structural similarity","0001726 // ruffle // non-traceable author statement /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0030139 // endocytic vesicle // traceable author statement","0003779 // actin binding // inferred from electronic annotation /// 0003785 // actin monomer binding // inferred from direct assay /// 0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008093 // cytoskeletal adaptor activity // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from electronic annotation","chr8:125563030-125740379 (-) // 99.93 // q24.13"]
["11751427_a_at",0.086182594,0.053216934,0.09315109,-0.10107708,-0.053216934,-0.10015011,0.098513134,0.001261003,1.1190943,0.16233155,1.1190943,"up","DNAJB1",3337.0,"0006457 // protein folding // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0006986 // response to unfolded protein // traceable author statement /// 0051085 // chaperone mediated protein folding requiring cofactor // inferred from electronic annotation /// 0070389 // chaperone cofactor-dependent protein refolding // inferred from direct assay","0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0031072 // heat shock protein binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // inferred from electronic annotation","chr19:14626066-14629236 (-) // 99.85 // p13.12"]
["11747211_a_at",-0.2140336,0.031077385,-0.054702282,0.04933262,-0.031077385,0.065600395,0.6234553,0.24031359,-1.0771143,-0.10717141,1.0771143,"down","PKD1L1",168507.0,"0003127 // detection of nodal flow // inferred from sequence or structural similarity /// 0016337 // cell-cell adhesion // non-traceable author statement /// 0060972 // left/right pattern formation // inferred from electronic annotation /// 0070986 // left/right axis specification // inferred from sequence or structural similarity","0016020 // membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0044441 // cilium part // inferred from sequence or structural similarity","","chr7:47848720-47867064 (-) // 87.2 // p12.3"]
["11739818_at",0.010856628,0.14954734,-0.010856628,-0.0361588,0.12816572,-0.039199114,0.8870887,0.6882481,1.0226033,0.03224655,1.0226033,"up","C9",735.0,"0006917 // induction of apoptosis // inferred from electronic annotation /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from electronic annotation /// 0006955 // immune response // inferred from electronic annotation /// 0006957 // complement activation, alternative pathway // inferred from electronic annotation /// 0006958 // complement activation, classical pathway // inferred from electronic annotation /// 0007596 // blood coagulation // inferred from electronic annotation /// 0019835 // cytolysis // inferred from electronic annotation /// 0019836 // hemolysis by symbiont of host erythrocytes // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005579 // membrane attack complex // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr5:39284309-39364662 (-) // 89.81 // p13.1"]
["11728787_a_at",0.027834415,-0.19884682,-0.027834415,-0.048146725,0.14857864,0.10597849,0.5967027,0.21053188,-1.0981581,-0.13508579,1.0981581,"down","PTPRR",5801.0,"0001701 // in utero embryonic development // inferred from expression pattern /// 0006470 // protein dephosphorylation // traceable author statement /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // traceable author statement /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // traceable author statement /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005001 // transmembrane receptor protein tyrosine phosphatase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from sequence or structural similarity /// 0019901 // protein kinase binding // inferred from electronic annotation","chr12:71031853-71314623 (-) // 99.05 // q15"]
["11746984_x_at",0.0683403,0.02413702,-0.18072462,0.042788506,-0.059737206,-0.024137497,0.95321304,0.8579876,-1.0109562,-0.015720448,1.0109562,"down","INTS3",65123.0,"0006281 // DNA repair // inferred from mutant phenotype /// 0006281 // DNA repair // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from mutant phenotype /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0010212 // response to ionizing radiation // inferred from mutant phenotype /// 0016180 // snRNA processing // inferred from direct assay /// 0031576 // G2/M transition checkpoint // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0032039 // integrator complex // inferred from direct assay /// 0070876 // SOSS complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr1:153700548-153745994 (+) // 95.81 // q21.3"]
["11749017_a_at",-0.0128240585,0.0128240585,0.10981846,0.07343006,-0.041306973,-0.026081085,0.81951654,0.5412429,1.0242672,0.034592114,1.0242672,"up","CARD14",79092.0,"0001934 // positive regulation of protein phosphorylation // inferred from direct assay /// 0007250 // activation of NF-kappaB-inducing kinase activity // non-traceable author statement /// 0042981 // regulation of apoptotic process // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // non-traceable author statement /// 0016235 // aggresome // inferred from direct assay","0050700 // CARD domain binding // inferred from physical interaction","chr17:78152304-78176428 (+) // 98.86 // q25.3"]
["11744236_a_at",-0.12551212,-0.15747929,-0.1681099,0.12551212,0.25175,0.14736176,0.10107897,0.0013672458,-1.2528744,-0.32524174,1.2528744,"down","DDX60",55601.0,"0009615 // response to virus // inferred from direct assay /// 0009615 // response to virus // inferred from electronic annotation /// 0045087 // innate immune response // inferred from electronic annotation /// 1900245 // positive regulation of MDA-5 signaling pathway // inferred from mutant phenotype /// 1900246 // positive regulation of RIG-I signaling pathway // inferred from mutant phenotype","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0003725 // double-stranded RNA binding // inferred from direct assay /// 0003727 // single-stranded RNA binding // inferred from direct assay /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr4:169137444-169239958 (-) // 96.61 // q32.3"]
["11735113_at",0.11473131,-0.033749342,-0.11456299,-0.027078867,0.027078629,0.11300492,0.8325546,0.56766355,-1.0344485,-0.048861828,1.0344485,"down","PTGER3",5733.0,"0001660 // fever generation // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007188 // adenylate cyclase-modulating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007200 // phospholipase C-activating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007204 // elevation of cytosolic calcium ion concentration // inferred from electronic annotation /// 0008219 // cell death // traceable author statement /// 0015701 // bicarbonate transport // inferred from electronic annotation /// 0030522 // intracellular receptor mediated signaling pathway // traceable author statement /// 0031622 // positive regulation of fever generation // inferred from sequence or structural similarity /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0035810 // positive regulation of urine volume // inferred from electronic annotation","0005635 // nuclear envelope // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // traceable author statement","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004879 // ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity // traceable author statement /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004955 // prostaglandin receptor activity // inferred from electronic annotation /// 0004957 // prostaglandin E receptor activity // inferred from electronic annotation /// 0004957 // prostaglandin E receptor activity // non-traceable author statement /// 0004957 // prostaglandin E receptor activity // traceable author statement","chr1:71471536-71513491 (-) // 95.45 // p31.1"]
["11728342_at",0.0027430058,0.012053728,-0.25910997,-0.13438559,0.105974436,-0.0027430058,0.8304189,0.5630104,-1.0504831,-0.07105296,1.0504831,"down","DCLK1",9201.0,"0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0007417 // central nervous system development // traceable author statement /// 0009615 // response to virus // inferred from expression pattern /// 0016197 // endosomal transport // non-traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005057 // receptor signaling protein activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr13:36342788-36705464 (-) // 97.08 // q13.3"]
["11755502_x_at",0.020359993,0.0024366379,0.07793236,-0.0024366379,-0.034233093,-0.03270912,0.43558517,0.08605264,1.0400858,0.056702536,1.0400858,"up","TECR",9524.0,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0019432 // triglyceride biosynthetic process // traceable author statement /// 0030497 // fatty acid elongation // inferred from direct assay /// 0035338 // long-chain fatty-acyl-CoA biosynthetic process // traceable author statement /// 0042761 // very long-chain fatty acid biosynthetic process // inferred from direct assay /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030176 // integral to endoplasmic reticulum membrane // inferred from direct assay","0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016627 // oxidoreductase activity, acting on the CH-CH group of donors // inferred from electronic annotation /// 0019166 // trans-2-enoyl-CoA reductase (NADPH) activity // inferred from electronic annotation","chr19:14640406-14676789 (+) // 88.67 // p13.12"]
["11739553_a_at",-0.011890411,0.07707691,-0.052675724,0.011890411,-0.11387825,0.31548166,0.8654772,0.6411137,-1.0475321,-0.06699443,1.0475321,"down","GAS7",8522.0,"0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0007050 // cell cycle arrest // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0030041 // actin filament polymerization // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0048812 // neuron projection morphogenesis // inferred from electronic annotation /// 0051017 // actin filament bundle assembly // inferred from electronic annotation","0001726 // ruffle // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005884 // actin filament // inferred from electronic annotation","0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0051015 // actin filament binding // inferred from electronic annotation","chr17:9813925-9940128 (-) // 90.07 // p13.1"]
["11722727_s_at",0.06910801,0.13735366,-0.19663668,-0.06910825,-0.26686573,0.37101173,0.99126464,0.97059447,-1.0058423,-0.008404171,1.0058423,"down","ZNF286A /// ZNF286B","57335 /// 729288","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:15602890-15624101 (+) // 69.61 // p12 /// chr17:18561741-18585717 (-) // 65.53 // p11.2"]
["11762333_x_at",-0.032214165,-0.09993148,0.015112877,0.033007145,0.082830906,-0.015112877,0.5571442,0.17242524,-1.0516,-0.072586015,1.0516,"down","NDUFA13",51079.0,"0006606 // protein import into nucleus // non-traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from mutant phenotype /// 0008624 // induction of apoptosis by extracellular signals // inferred from direct assay /// 0017148 // negative regulation of translation // inferred from direct assay /// 0022900 // electron transport chain // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0030262 // apoptotic nuclear change // inferred from direct assay /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0030308 // negative regulation of cell growth // inferred from mutant phenotype /// 0044281 // small molecule metabolic process // traceable author statement /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0072593 // reactive oxygen species metabolic process // inferred from mutant phenotype","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005746 // mitochondrial respiratory chain // inferred from direct assay /// 0005747 // mitochondrial respiratory chain complex I // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from direct assay /// 0070469 // respiratory chain // inferred from electronic annotation","0003954 // NADH dehydrogenase activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // non-traceable author statement /// 0008137 // NADH dehydrogenase (ubiquinone) activity // inferred from direct assay","chr19:19627036-19639863 (+) // 96.97 // p13.11"]
["11736214_x_at",-0.0014295578,0.12528181,-0.012378216,0.026126862,0.0014295578,-0.027777195,0.7833983,0.47120377,1.0261428,0.037231565,1.0261428,"up","STAG3L1 /// STAG3L2 /// STAG3L3","442578 /// 442582 /// 54441","","0000795 // synaptonemal complex // inferred from electronic annotation /// 0000802 // transverse filament // inferred from electronic annotation /// 0001673 // male germ cell nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0030893 // meiotic cohesin complex // inferred from electronic annotation","","chr7:74988428-74997081 (+) // 64.97 // q11.23 /// chr7:72467821-72476466 (-) // 64.21 // q11.23"]
["11730164_a_at",-0.0916481,-0.0045933723,0.17264128,0.0045933723,-0.058817387,0.04011488,0.9070083,0.73454195,1.0211322,0.0301697,1.0211322,"up","TRIM37",4591.0,"0016567 // protein ubiquitination // inferred from electronic annotation /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0051865 // protein autoubiquitination // inferred from direct assay /// 0070842 // aggresome assembly // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005777 // peroxisome // inferred from direct assay /// 0005777 // peroxisome // inferred from electronic annotation /// 0016235 // aggresome // inferred from direct assay /// 0044445 // cytosolic part // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0005164 // tumor necrosis factor receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:57060006-57184266 (-) // 98.42 // q22"]
["11716090_a_at",-0.11073923,0.0789032,0.106487274,0.07814026,-0.34433603,-0.07814026,0.72466344,0.37788773,1.1016473,0.13966236,1.1016473,"up","PRG2",5553.0,"0006955 // immune response // inferred from electronic annotation /// 0042742 // defense response to bacterium // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0030133 // transport vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0008201 // heparin binding // inferred from electronic annotation /// 0030246 // carbohydrate binding // traceable author statement /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr11:57154254-57177586 (-) // 78.92 // q12.1"]
["11737396_a_at",-0.020591736,-0.05559063,0.010450363,0.040603638,0.08144665,-0.010450363,0.5247952,0.14511795,-1.0418233,-0.059110563,1.0418233,"down","TROVE2",6738.0,"0006383 // transcription from RNA polymerase III promoter // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // traceable author statement","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement","chr1:193028752-193054365 (+) // 99.8 // q31.2"]
["11733022_at",0.005455494,-0.036146164,-0.06386423,-0.005455494,0.077641726,0.014014244,0.5102879,0.13444337,-1.0426477,-0.060251795,1.0426477,"down","BTG1",694.0,"0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006479 // protein methylation // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0016477 // cell migration // non-traceable author statement /// 0030308 // negative regulation of cell growth // non-traceable author statement /// 0042981 // regulation of apoptotic process // inferred from mutant phenotype /// 0043434 // response to peptide hormone stimulus // inferred from electronic annotation /// 0045603 // positive regulation of endothelial cell differentiation // inferred from mutant phenotype /// 0045663 // positive regulation of myoblast differentiation // inferred from direct assay /// 0045663 // positive regulation of myoblast differentiation // non-traceable author statement /// 0045766 // positive regulation of angiogenesis // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from mutant phenotype /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from mutant phenotype","0003712 // transcription cofactor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0019900 // kinase binding // non-traceable author statement","chr12:92534055-92539673 (-) // 97.05 // q21.33"]
["11734070_x_at",-0.012385368,0.027371407,0.12909985,-0.0073509216,-0.03484249,0.0073509216,0.62875473,0.24589437,1.0422077,0.059642844,1.0422077,"up","SSR3",6747.0,"0006412 // translation // traceable author statement /// 0006613 // cotranslational protein targeting to membrane // inferred from electronic annotation /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005784 // Sec61 translocon complex // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030176 // integral to endoplasmic reticulum membrane // inferred from electronic annotation","","chr3:156258544-156272935 (-) // 88.5 // q25.31"]
["11754519_x_at",-0.10505915,0.16229773,0.14193726,0.004110813,-0.004110813,-0.05114937,0.7361145,0.39493412,1.0595427,0.08344167,1.0595427,"up","PRR4",11272.0,"0007601 // visual perception // traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement","","chr12:10998447-11002074 (-) // 89.67 // p13.2"]
["11726398_a_at",-0.23431087,0.022089243,-0.022089243,0.17497277,-0.16836834,0.101471186,0.7601963,0.43275857,-1.0823213,-0.11412882,1.0823213,"down","SPTB",6710.0,"0007411 // axon guidance // traceable author statement /// 0051693 // actin filament capping // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005938 // cell cortex // inferred from electronic annotation /// 0008091 // spectrin // inferred from electronic annotation /// 0008091 // spectrin // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0014731 // spectrin-associated cytoskeleton // inferred from direct assay /// 0015629 // actin cytoskeleton // traceable author statement /// 0031235 // intrinsic to internal side of plasma membrane // traceable author statement /// 0043234 // protein complex // inferred from direct assay","0003779 // actin binding // inferred from electronic annotation /// 0003779 // actin binding // traceable author statement /// 0005200 // structural constituent of cytoskeleton // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0030506 // ankyrin binding // inferred from physical interaction /// 0051015 // actin filament binding // inferred from direct assay","chr14:65212907-65346601 (-) // 99.28 // q23.3"]
["11722263_at",-0.0022907257,0.0017051697,0.12949753,-0.0017051697,0.014719009,-0.03283882,0.69784373,0.3368366,1.0349629,0.049579043,1.0349629,"up","MRPS10",55173.0,"0006412 // translation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005840 // ribosome // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003735 // structural constituent of ribosome // inferred from electronic annotation","chr6:42174538-42185648 (-) // 84.53 // p21.1"]
["11730634_a_at",-0.024366379,-0.02003169,0.02003169,0.039207935,-0.061176777,0.061205626,0.85946035,0.6260776,-1.014804,-0.021201119,1.014804,"down","MAK",4117.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // non-traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // non-traceable author statement /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045494 // photoreceptor cell maintenance // inferred from sequence or structural similarity /// 0045494 // photoreceptor cell maintenance // inferred from electronic annotation /// 0046777 // protein autophosphorylation // inferred from mutant phenotype","0001750 // photoreceptor outer segment // inferred from sequence or structural similarity /// 0001750 // photoreceptor outer segment // inferred from electronic annotation /// 0001917 // photoreceptor inner segment // inferred from direct assay /// 0001917 // photoreceptor inner segment // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0030496 // midbody // inferred from direct assay /// 0030496 // midbody // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0072686 // mitotic spindle // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0004672 // protein kinase activity // non-traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004693 // cyclin-dependent protein kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005524 // ATP binding // non-traceable author statement /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr6:10762870-10838716 (-) // 91.68 // p24.2"]
["11733072_a_at",0.13377905,0.09675884,0.07522631,-0.14924955,-0.15617228,-0.07522583,0.11050196,0.0018049963,1.1718631,0.228804,1.1718631,"up","PKN1",5585.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0006972 // hyperosmotic response // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007257 // activation of JUN kinase activity // traceable author statement /// 0010631 // epithelial cell migration // inferred from mutant phenotype /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0035407 // histone H3-T11 phosphorylation // inferred from direct assay /// 2000145 // regulation of cell motility // inferred from mutant phenotype","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0030496 // midbody // inferred from direct assay /// 0030496 // midbody // inferred from electronic annotation /// 0032154 // cleavage furrow // inferred from direct assay /// 0032154 // cleavage furrow // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from direct assay /// 0004672 // protein kinase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004697 // protein kinase C activity // inferred from electronic annotation /// 0005080 // protein kinase C binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0017049 // GTP-Rho binding // inferred from direct assay /// 0030374 // ligand-dependent nuclear receptor transcription coactivator activity // inferred from direct assay /// 0030374 // ligand-dependent nuclear receptor transcription coactivator activity // inferred from mutant phenotype /// 0035402 // histone kinase activity (H3-T11 specific) // inferred from direct assay /// 0042393 // histone binding // inferred from direct assay /// 0042826 // histone deacetylase binding // inferred from direct assay /// 0048365 // Rac GTPase binding // inferred from direct assay /// 0050681 // androgen receptor binding // inferred from direct assay","chr19:14551958-14582671 (+) // 89.63 // p13.12"]
["11720004_at",0.054797173,0.05256939,0.10991478,-0.07925987,-0.069241524,-0.05256939,0.118206196,0.002354791,1.1014856,0.13945064,1.1014856,"up","C19orf21",126353.0,"","","","chr19:751124-764318 (+) // 97.82 // p13.3"]
["11734182_a_at",0.004773617,0.08860016,-0.0047740936,-0.010267258,0.092972755,-0.06412649,0.88803524,0.6921438,1.0163097,0.023340154,1.0163097,"up","CCDC9",26093.0,"","","","chr19:47759715-47775210 (+) // 90.57 // q13.32"]
["11756554_x_at",-0.018582344,-9.717941E-4,0.007399559,9.717941E-4,-0.004664421,0.029763222,0.73064727,0.386654,-1.008871,-0.012741657,1.008871,"down","PSMC5",5705.0,"0000075 // cell cycle checkpoint // traceable author statement /// 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000084 // S phase of mitotic cell cycle // traceable author statement /// 0000209 // protein polyubiquitination // traceable author statement /// 0000216 // M/G1 transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006200 // ATP catabolic process // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0030163 // protein catabolic process // inferred from electronic annotation /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043069 // negative regulation of programmed cell death // non-traceable author statement /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // non-traceable author statement /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement","0000502 // proteasome complex // inferred from direct assay /// 0000502 // proteasome complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0031410 // cytoplasmic vesicle // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003712 // transcription cofactor activity // traceable author statement /// 0005102 // receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016887 // ATPase activity // traceable author statement /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0031531 // thyrotropin-releasing hormone receptor binding // inferred from physical interaction","chr17:61904674-61909346 (+) // 88.92 // q23.3"]
["11743456_s_at",0.0020823479,-0.031841278,-1.3113022E-4,-0.030011654,0.03405714,1.3113022E-4,0.85917634,0.6254315,-1.0079021,-0.011355578,1.0079021,"down","AP5M1",55745.0,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0016197 // endosomal transport // inferred from mutant phenotype","0005737 // cytoplasm // inferred from electronic annotation /// 0005764 // lysosome // inferred from direct assay /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030119 // AP-type membrane coat adaptor complex // inferred from direct assay /// 0030131 // clathrin adaptor complex // inferred from electronic annotation /// 0031902 // late endosome membrane // inferred from electronic annotation","","chr14:57735205-57757011 (+) // 94.85 // q22.3"]
["11748134_x_at",0.04784298,-0.030657768,0.030657768,-0.16708231,-0.103805065,0.053821087,0.65013367,0.27491328,1.063119,0.08830316,1.063119,"up","SLC2A11",66035.0,"0006810 // transport // inferred from electronic annotation /// 0008643 // carbohydrate transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation /// 0022857 // transmembrane transporter activity // inferred from electronic annotation /// 0022891 // substrate-specific transmembrane transporter activity // inferred from electronic annotation","chr22:24199137-24226298 (+) // 93.75 // q11.23"]
["11743566_at",-0.017177582,-0.03706646,-0.031861305,0.017177582,0.047201157,0.054507256,0.16595238,0.0060677123,-1.0485026,-0.06833039,1.0485026,"down","ACBD3",64746.0,"0006694 // steroid biosynthetic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0008610 // lipid biosynthetic process // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000062 // fatty-acyl-CoA binding // inferred from electronic annotation","chr1:226332381-226374419 (-) // 92.86 // q42.12"]
["11761208_x_at",0.09055185,0.0024790764,-0.0024790764,-0.028515816,0.045737267,-0.10697842,0.68818945,0.32374263,1.0425402,0.060103003,1.0425402,"up","PSMB7",5695.0,"0000075 // cell cycle checkpoint // traceable author statement /// 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000084 // S phase of mitotic cell cycle // traceable author statement /// 0000209 // protein polyubiquitination // traceable author statement /// 0000216 // M/G1 transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051603 // proteolysis involved in cellular protein catabolic process // inferred from electronic annotation","0000502 // proteasome complex // traceable author statement /// 0000502 // proteasome complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005839 // proteasome core complex // inferred from electronic annotation","0004175 // endopeptidase activity // inferred from electronic annotation /// 0004298 // threonine-type endopeptidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr9:127118293-127177753 (-) // 99.72 // q33.3"]
["11763949_at",0.05728674,-0.0820446,-0.11870408,-0.05728674,0.262614,0.0749135,0.6371546,0.25799632,-1.1028482,-0.14123419,1.1028482,"down","DAD1P1",56286.0,"","","","chr12:25070635-25071266 (+) // 100.0 // p12.1"]
["11760405_x_at",0.025296211,-0.11561251,-0.016756058,0.14120483,-0.0074415207,0.0074415207,0.6387481,0.25970817,-1.0590415,-0.08275913,1.0590415,"down","TRMT13",54482.0,"0008033 // tRNA processing // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation","","0008168 // methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:100598718-100610123 (+) // 99.5 // p21.2"]
["11722221_at",0.14743733,0.0,0.45310044,-0.052734375,0.0,-0.22679186,0.49503472,0.12214885,1.2254866,0.29335475,1.2254866,"up","BFSP2",8419.0,"0007010 // cytoskeleton organization // inferred from electronic annotation /// 0007601 // visual perception // inferred from electronic annotation /// 0045104 // intermediate filament cytoskeleton organization // inferred from electronic annotation /// 0048469 // cell maturation // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0070307 // lens fiber cell development // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005882 // intermediate filament // inferred from electronic annotation /// 0005882 // intermediate filament // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation","0005198 // structural molecule activity // inferred from electronic annotation /// 0005200 // structural constituent of cytoskeleton // traceable author statement /// 0005212 // structural constituent of eye lens // inferred from electronic annotation","chr3:133118789-133194039 (+) // 94.31 // q22.1"]
["11727678_a_at",0.0056791306,-0.0056791306,-0.043391705,0.075585365,-0.014265537,0.09804535,0.52458787,0.144871,-1.0479615,-0.06758568,1.0479615,"down","MTMR14",64419.0,"0016311 // dephosphorylation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation","0001726 // ruffle // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0004438 // phosphatidylinositol-3-phosphatase activity // inferred from direct assay /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation","chr3:9691143-9744077 (+) // 97.12 // p25.3"]
["11752356_a_at",0.16473532,-0.009139061,0.08027077,0.009139061,-0.4212122,-0.026475906,0.586237,0.20031396,1.1686195,0.22480528,1.1686195,"up","ABCC4",10257.0,"0002576 // platelet degranulation // traceable author statement /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031088 // platelet dense granule membrane // inferred from direct assay /// 0031088 // platelet dense granule membrane // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0005254 // chloride channel activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016404 // 15-hydroxyprostaglandin dehydrogenase (NAD+) activity // non-traceable author statement /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0042626 // ATPase activity, coupled to transmembrane movement of substances // inferred from electronic annotation","chr13:95822475-95953664 (-) // 97.48 // q32.1"]
["11729025_a_at",0.031861782,0.020892143,-0.033601284,-0.17366457,0.034978867,-0.020892143,0.74882305,0.41489604,1.04216,0.059576835,1.04216,"up","ILDR1",286676.0,"","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation","chr3:121706170-121741030 (-) // 78.95 // q13.33"]
["11724184_at",-0.08042741,-0.035432577,0.035432816,0.11071277,0.057489395,-0.05893588,0.7094419,0.35415223,-1.0448031,-0.06323114,1.0448031,"down","ATCAY",85300.0,"0006810 // transport // inferred from electronic annotation","","0005515 // protein binding // inferred from physical interaction /// 0019894 // kinesin binding // inferred from physical interaction","chr19:3880425-3928080 (+) // 79.28 // p13.3"]
["11755601_a_at",0.119951725,0.038006306,0.016394138,-0.034951687,-0.030654907,-0.016394138,0.37540087,0.05595655,1.0610193,0.0854509,1.0610193,"up","CCL13",6357.0,"0006874 // cellular calcium ion homeostasis // traceable author statement /// 0006935 // chemotaxis // traceable author statement /// 0006935 // chemotaxis // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from electronic annotation /// 0006954 // inflammatory response // traceable author statement /// 0006955 // immune response // inferred from electronic annotation /// 0007010 // cytoskeleton organization // inferred from direct assay /// 0007165 // signal transduction // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0008360 // regulation of cell shape // inferred from direct assay /// 0048245 // eosinophil chemotaxis // inferred from direct assay","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement","0005102 // receptor binding // traceable author statement /// 0005125 // cytokine activity // inferred from electronic annotation /// 0008009 // chemokine activity // inferred from direct assay /// 0008009 // chemokine activity // inferred from electronic annotation /// 0008009 // chemokine activity // traceable author statement","chr17:32684503-32685628 (+) // 97.94 // q12"]
["11761857_at",0.12262845,0.06394625,-0.10683894,-0.10137105,0.06393361,-0.06393337,0.8074746,0.5172265,1.0427324,0.060368903,1.0427324,"up","ADAM33",80332.0,"0006508 // proteolysis // inferred from electronic annotation /// 0006508 // proteolysis // non-traceable author statement /// 0007229 // integrin-mediated signaling pathway // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0004222 // metalloendopeptidase activity // non-traceable author statement /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008270 // zinc ion binding // non-traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr20:3657101-3662886 (-) // 66.93 // p13"]
["11731199_at",0.13773394,-0.042540073,-0.07768631,0.022072315,0.04413724,-0.022072315,0.96946746,0.9045419,-1.0061717,-0.008876522,1.0061717,"down","LHFPL3",375612.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr7:103969103-104549005 (+) // 95.8 // q22.2"]
["11763699_a_at",0.025445938,0.05123806,-0.11361742,-0.08086109,0.07258606,-0.025446415,0.996252,0.98820436,-1.0007424,-0.0010707105,1.0007424,"down","CLASP2",23122.0,"0000087 // M phase of mitotic cell cycle // traceable author statement /// 0000236 // mitotic prometaphase // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0007020 // microtubule nucleation // inferred from mutant phenotype /// 0007026 // negative regulation of microtubule depolymerization // non-traceable author statement /// 0007026 // negative regulation of microtubule depolymerization // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0007163 // establishment or maintenance of cell polarity // traceable author statement /// 0007163 // establishment or maintenance of cell polarity // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0016477 // cell migration // inferred from electronic annotation /// 0031023 // microtubule organizing center organization // inferred from mutant phenotype /// 0031110 // regulation of microtubule polymerization or depolymerization // inferred from mutant phenotype /// 0032886 // regulation of microtubule-based process // inferred from mutant phenotype /// 0034453 // microtubule anchoring // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005828 // kinetochore microtubule // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0005874 // microtubule // inferred from electronic annotation /// 0005881 // cytoplasmic microtubule // inferred from direct assay /// 0005881 // cytoplasmic microtubule // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005938 // cell cortex // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from direct assay /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // inferred from electronic annotation /// 0008107 // galactoside 2-alpha-L-fucosyltransferase activity // non-traceable author statement /// 0051010 // microtubule plus-end binding // inferred from direct assay","chr3:33537736-33546943 (-) // 58.6 // p22.3"]
["11727424_s_at",0.0020866394,0.001376152,0.003162384,-0.0017824173,-0.001376152,-0.07463741,0.6801013,0.31229633,1.019697,0.028140454,1.019697,"up","CANX",821.0,"0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0006457 // protein folding // traceable author statement /// 0006457 // protein folding // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0009306 // protein secretion // traceable author statement /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0048488 // synaptic vesicle endocytosis // inferred from sequence or structural similarity /// 0072583 // clathrin-mediated endocytosis // inferred from sequence or structural similarity","0005622 // intracellular // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // non-traceable author statement /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005791 // rough endoplasmic reticulum // inferred from electronic annotation /// 0005840 // ribosome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0032839 // dendrite cytoplasm // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from electronic annotation /// 0071556 // integral to lumenal side of endoplasmic reticulum membrane // traceable author statement","0005509 // calcium ion binding // inferred from electronic annotation /// 0005509 // calcium ion binding // traceable author statement /// 0005509 // calcium ion binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0030246 // carbohydrate binding // inferred from electronic annotation /// 0034185 // apolipoprotein binding // inferred from electronic annotation /// 0035255 // ionotropic glutamate receptor binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // non-traceable author statement /// 0051082 // unfolded protein binding // inferred from electronic annotation","chr5:179125927-179158637 (+) // 91.82 // q35.3"]
["11738167_x_at",0.023941994,-7.1907043E-4,7.1907043E-4,0.047017097,-0.1331625,-0.03696823,0.7423251,0.40464875,1.0345609,0.0490186,1.0345609,"up","CBX2",84733.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007548 // sex differentiation // inferred from electronic annotation /// 0016568 // chromatin modification // non-traceable author statement /// 0016568 // chromatin modification // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045137 // development of primary sexual characteristics // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-dependent // non-traceable author statement","0000792 // heterochromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0031519 // PcG protein complex // inferred from direct assay /// 0031519 // PcG protein complex // inferred from electronic annotation /// 0035102 // PRC1 complex // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0035064 // methylated histone residue binding // inferred from electronic annotation","chr17:77751992-77756331 (+) // 90.19 // q25.3"]
["11740265_a_at",0.0011539459,-0.0011534691,-0.19044447,0.046464443,-0.0055475235,0.086126804,0.58511937,0.19887781,-1.0761127,-0.10582924,1.0761127,"down","C16orf7",9605.0,"0015986 // ATP synthesis coupled proton transport // traceable author statement /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005215 // transporter activity // traceable author statement","chr16:89773540-89787394 (-) // 99.21 // q24.3"]
["11755701_a_at",0.0069737434,-0.021867275,0.27477264,-0.09958315,-0.0069737434,0.010406494,0.6730989,0.30274802,1.0857384,0.118676566,1.0857384,"up","AMPH",273.0,"0006897 // endocytosis // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007612 // learning // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0045807 // positive regulation of endocytosis // inferred from electronic annotation /// 0048488 // synaptic vesicle endocytosis // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0008021 // synaptic vesicle // traceable author statement /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030672 // synaptic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043679 // axon terminus // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr7:38424418-38502714 (-) // 98.92 // p14.1"]
["11746131_a_at",-0.12941718,-0.083943844,-0.053048134,0.13798285,0.053048134,0.16273952,0.17152515,0.0066248393,-1.1540667,-0.20672658,1.1540667,"down","ADAM18",8749.0,"0006508 // proteolysis // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0007283 // spermatogenesis // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation","chr8:39442007-39469094 (+) // 79.79 // p11.22"]
["11738681_at",-0.2397561,-0.006900072,0.0069003105,-0.11971021,0.107667685,0.025835276,0.7780238,0.4621677,-1.0603321,-0.08451614,1.0603321,"down","OR13C5",138799.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr9:107360646-107361788 (-) // 100.0 // q31.1"]
["11753943_x_at",-0.015286922,0.014898777,0.1407609,0.04492235,-0.014899254,-0.03511381,0.749426,0.41592804,1.0341804,0.048487872,1.0341804,"up","MICAL2",9645.0,"0008152 // metabolic process // inferred from electronic annotation /// 0030042 // actin filament depolymerization // inferred from sequence or structural similarity /// 0055114 // oxidation-reduction process // inferred from sequence or structural similarity /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation","0003779 // actin binding // inferred from sequence or structural similarity /// 0003779 // actin binding // inferred from electronic annotation /// 0004497 // monooxygenase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016709 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation /// 0071949 // FAD binding // inferred from sequence or structural similarity","chr11:12137952-12285335 (+) // 96.81 // p15.3"]
["11716329_s_at",0.052193165,-0.08144808,0.21329832,0.008895874,-0.043152332,-0.008895397,0.7593053,0.4310493,1.0538955,0.075731784,1.0538955,"up","GJA1",2697.0,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0001764 // neuron migration // inferred from electronic annotation /// 0001947 // heart looping // inferred from electronic annotation /// 0002070 // epithelial cell maturation // inferred from electronic annotation /// 0006810 // transport // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006936 // muscle contraction // traceable author statement /// 0007154 // cell communication // inferred from electronic annotation /// 0007165 // signal transduction // inferred from mutant phenotype /// 0007267 // cell-cell signaling // inferred from electronic annotation /// 0007267 // cell-cell signaling // traceable author statement /// 0007507 // heart development // traceable author statement /// 0007507 // heart development // inferred from electronic annotation /// 0007512 // adult heart development // inferred from electronic annotation /// 0008016 // regulation of heart contraction // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0009268 // response to pH // inferred from electronic annotation /// 0010232 // vascular transport // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0010629 // negative regulation of gene expression // inferred from electronic annotation /// 0015867 // ATP transport // inferred from electronic annotation /// 0016044 // cellular membrane organization // traceable author statement /// 0016264 // gap junction assembly // traceable author statement /// 0034220 // ion transmembrane transport // traceable author statement /// 0035050 // embryonic heart tube development // inferred from electronic annotation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from mutant phenotype /// 0043403 // skeletal muscle tissue regeneration // inferred from electronic annotation /// 0043434 // response to peptide hormone stimulus // inferred from electronic annotation /// 0045732 // positive regulation of protein catabolic process // inferred from electronic annotation /// 0045844 // positive regulation of striated muscle tissue development // inferred from electronic annotation /// 0048514 // blood vessel morphogenesis // inferred from electronic annotation /// 0048812 // neuron projection morphogenesis // inferred from electronic annotation /// 0051259 // protein oligomerization // inferred from electronic annotation /// 0051924 // regulation of calcium ion transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0060174 // limb bud formation // inferred from electronic annotation","0000139 // Golgi membrane // traceable author statement /// 0000139 // Golgi membrane // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from electronic annotation /// 0005771 // multivesicular body // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from sequence or structural similarity /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0005911 // cell-cell junction // inferred from electronic annotation /// 0005916 // fascia adherens // inferred from electronic annotation /// 0005921 // gap junction // inferred from sequence or structural similarity /// 0005921 // gap junction // inferred from electronic annotation /// 0005922 // connexon complex // inferred from electronic annotation /// 0005922 // connexon complex // traceable author statement /// 0014704 // intercalated disc // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030660 // Golgi-associated vesicle membrane // traceable author statement /// 0030660 // Golgi-associated vesicle membrane // inferred from electronic annotation /// 0045121 // membrane raft // inferred from sequence or structural similarity /// 0045121 // membrane raft // inferred from electronic annotation","0004871 // signal transducer activity // inferred from mutant phenotype /// 0005102 // receptor binding // inferred from electronic annotation /// 0005243 // gap junction channel activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0015075 // ion transmembrane transporter activity // traceable author statement /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0022857 // transmembrane transporter activity // inferred from electronic annotation /// 0030165 // PDZ domain binding // inferred from electronic annotation","chr6:121756722-121770873 (+) // 95.05 // q22.31"]
["11758847_at",0.054419994,0.11865902,-0.06283045,-0.15273333,0.034360647,-0.03436041,0.6816585,0.31414667,1.0626457,0.087660626,1.0626457,"up","MARCH9",92979.0,"0016567 // protein ubiquitination // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005795 // Golgi stack // inferred from direct assay /// 0005802 // trans-Golgi network // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:58148880-58154190 (+) // 92.24 // q14.1"]
["11756493_a_at",-0.019333363,0.01933384,0.050867558,0.058557987,-0.124358654,-0.048357487,0.73124784,0.38769522,1.0388654,0.05500881,1.0388654,"up","ADC",113451.0,"0006591 // ornithine metabolic process // inferred from electronic annotation /// 0006595 // polyamine metabolic process // traceable author statement /// 0006596 // polyamine biosynthetic process // inferred from electronic annotation /// 0007283 // spermatogenesis // non-traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0097055 // agmatine biosynthetic process // traceable author statement","0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0003824 // catalytic activity // inferred from electronic annotation /// 0008792 // arginine decarboxylase activity // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0016831 // carboxy-lyase activity // inferred from electronic annotation","chr1:33546765-33586084 (+) // 92.35 // p35.1"]
["11734957_a_at",-0.019443512,-0.05506277,-0.013771534,0.034198284,0.013771057,0.019373417,0.26669952,0.02214548,-1.0366102,-0.051873557,1.0366102,"down","C14orf135",64430.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr14:60558544-60601530 (+) // 99.38 // q23.1"]
["11715212_x_at",0.007962227,0.024474144,-0.014557838,0.018312454,-0.011236191,-0.007962227,0.8880155,0.6919209,1.0043449,0.006254845,1.0043449,"up","SCAND1",51282.0,"0006355 // regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006917 // induction of apoptosis // non-traceable author statement /// 0016032 // viral reproduction // inferred from electronic annotation /// 0030851 // granulocyte differentiation // non-traceable author statement /// 0042127 // regulation of cell proliferation // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement","0003677 // DNA binding // non-traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from sequence or structural similarity /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from electronic annotation /// 0003723 // RNA binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from sequence or structural similarity /// 0042802 // identical protein binding // inferred from physical interaction","chr20:34541545-34542428 (-) // 92.26 // q11.23"]
["11763282_x_at",0.06605649,0.101852894,-0.06722832,0.0652504,-0.1243794,-0.0652504,0.7255764,0.37978715,1.0533757,0.07502011,1.0533757,"up","RPL23AP7 /// RPL23AP82","118433 /// 284942","0006412 // translation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005840 // ribosome // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // inferred from electronic annotation","chr2:114367303-114384617 (-) // 33.97 // q13"]
["11760291_a_at",0.06353235,-0.17882681,0.44276857,-0.060562134,-0.08558512,0.060562134,0.79868364,0.50116813,1.1001395,0.13768646,1.1001395,"up","NAA10",8260.0,"0006323 // DNA packaging // traceable author statement /// 0006474 // N-terminal protein amino acid acetylation // inferred from direct assay /// 0006475 // internal protein amino acid acetylation // traceable author statement","0005622 // intracellular // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0004596 // peptide alpha-N-acetyltransferase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008080 // N-acetyltransferase activity // inferred from electronic annotation /// 0008080 // N-acetyltransferase activity // traceable author statement /// 0016407 // acetyltransferase activity // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0043022 // ribosome binding // inferred from direct assay","chrX:153195530-153200493 (-) // 98.33 // q28"]
["11742935_a_at",-0.0021591187,0.04932022,0.0021586418,-0.046311855,-0.102582455,0.016830444,0.5747986,0.18890822,1.0427991,0.060461264,1.0427991,"up","RTN4R",65078.0,"0007409 // axonogenesis // non-traceable author statement /// 0007409 // axonogenesis // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0050770 // regulation of axonogenesis // traceable author statement /// 0050771 // negative regulation of axonogenesis // traceable author statement","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0031225 // anchored to membrane // inferred from electronic annotation","0004872 // receptor activity // non-traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr22:20228937-20255838 (-) // 89.14 // q11.21"]
["11729877_at",0.20994759,0.22301531,-0.059043884,-0.08503437,-0.04063368,0.04063368,0.5834824,0.19720112,1.1118672,0.15298447,1.1118672,"up","ZNF445",353274.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016032 // viral reproduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:44480916-44519162 (-) // 63.14 // p21.31"]
["11719553_s_at",-0.0077795982,0.0077795982,0.019827366,-0.020755291,0.17647743,-0.011270523,0.82693887,0.5558797,-1.0292128,-0.04154135,1.0292128,"down","C2CD2L",9854.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr11:118978050-118987831 (+) // 95.98 // q23.3"]
["11748531_x_at",0.024689674,0.04661274,-0.024689674,-0.24343252,0.035591602,-0.06192732,0.6544982,0.27974018,1.0758376,0.10546033,1.0758376,"up","CACFD1",11094.0,"0048488 // synaptic vesicle endocytosis // inferred from electronic annotation /// 0070588 // calcium ion transmembrane transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030285 // integral to synaptic vesicle membrane // inferred from electronic annotation","0005262 // calcium channel activity // inferred from electronic annotation","chr9:136325098-136334448 (+) // 96.41 // q34.2"]
["11734158_a_at",-0.12749338,6.556511E-4,0.04411745,-0.049271107,0.097765446,-6.556511E-4,0.8255668,0.55286855,-1.0306251,-0.04351964,1.0306251,"down","HACE1",57531.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006464 // cellular protein modification process // inferred from electronic annotation /// 0006944 // cellular membrane fusion // inferred from mutant phenotype /// 0007030 // Golgi organization // inferred from direct assay /// 0007049 // cell cycle // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0016601 // Rac protein signal transduction // traceable author statement /// 0030334 // regulation of cell migration // inferred from mutant phenotype /// 0042787 // protein ubiquitination involved in ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0070936 // protein K48-linked ubiquitination // inferred from direct assay","0000139 // Golgi membrane // inferred from direct assay /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // not recorded /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation","0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation /// 0017137 // Rab GTPase binding // inferred from direct assay /// 0048365 // Rac GTPase binding // inferred from physical interaction","chr6:105175967-105307793 (-) // 96.37 // q16.3"]
["11750037_a_at",0.16774082,0.07611561,-0.009097099,-0.19523525,-0.09393072,0.009097099,0.44600824,0.092687,1.1263143,0.17160945,1.1263143,"up","CHMP7",91782.0,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from mutant phenotype /// 0015031 // protein transport // inferred from electronic annotation /// 0016044 // cellular membrane organization // traceable author statement /// 0016197 // endosomal transport // traceable author statement /// 0045324 // late endosome to vacuole transport // inferred from mutant phenotype","0000815 // ESCRT III complex // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0008565 // protein transporter activity // inferred from mutant phenotype","chr8:23104155-23116587 (+) // 98.85 // p21.3"]
["11755755_a_at",-0.11434889,0.098311186,-0.11732602,-0.04343176,0.16641712,0.04343176,0.70548964,0.34685683,-1.0717192,-0.09992691,1.0717192,"down","DDX26B",203522.0,"","","","chrX:134654593-134716434 (+) // 97.64 // q26.3"]
["11721132_at",0.04622841,0.033584595,0.036681175,-0.033584595,-0.12231064,-0.039087296,0.27128994,0.023044674,1.0746193,0.10382564,1.0746193,"up","HCFC1",3054.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from direct assay /// 0016568 // chromatin modification // inferred from electronic annotation /// 0019046 // reactivation of latent virus // non-traceable author statement /// 0019046 // reactivation of latent virus // inferred from electronic annotation /// 0043254 // regulation of protein complex assembly // inferred from direct assay /// 0043981 // histone H4-K5 acetylation // inferred from direct assay /// 0043982 // histone H4-K8 acetylation // inferred from direct assay /// 0043984 // histone H4-K16 acetylation // inferred from direct assay /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045787 // positive regulation of cell cycle // traceable author statement /// 0050821 // protein stabilization // inferred from direct assay","0000123 // histone acetyltransferase complex // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005671 // Ada2/Gcn5/Ada3 transcription activator complex // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0043025 // neuronal cell body // inferred from direct assay /// 0048188 // Set1C/COMPASS complex // inferred from direct assay /// 0070461 // SAGA-type complex // inferred from direct assay /// 0070688 // MLL5-L complex // inferred from direct assay /// 0071339 // MLL1 complex // inferred from direct assay","0003682 // chromatin binding // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003713 // transcription coactivator activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0043995 // histone acetyltransferase activity (H4-K5 specific) // inferred from direct assay /// 0043996 // histone acetyltransferase activity (H4-K8 specific) // inferred from direct assay /// 0046972 // histone acetyltransferase activity (H4-K16 specific) // inferred from direct assay","chrX:153213007-153237269 (-) // 96.71 // q28"]
["11736857_at",0.06340051,0.044800043,-0.00941658,-0.13687539,-0.06340122,0.009416342,0.47911754,0.112128735,1.0692121,0.09654804,1.0692121,"up","ODF1",4956.0,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // non-traceable author statement /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation","0001520 // outer dense fiber // non-traceable author statement /// 0001520 // outer dense fiber // inferred from electronic annotation","0005198 // structural molecule activity // non-traceable author statement /// 0019904 // protein domain specific binding // inferred from electronic annotation","chr8:103563799-103573245 (+) // 92.99 // q22.3"]
["11754476_x_at",0.30751133,0.07130861,-0.25445986,0.21186686,-0.10140133,-0.07130861,0.9637334,0.8890135,1.0198811,0.02840101,1.0198811,"up","DNM1",1759.0,"0006184 // GTP catabolic process // traceable author statement /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006897 // endocytosis // inferred from mutant phenotype /// 0006897 // endocytosis // inferred from electronic annotation /// 0006898 // receptor-mediated endocytosis // inferred from mutant phenotype /// 0007032 // endosome organization // inferred from mutant phenotype","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0030117 // membrane coat // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction","chr9:131015976-131017516 (+) // 92.36 // q34.11"]
["11724247_a_at",-0.008070469,-0.05390644,-0.2797513,0.023040295,0.008070469,0.12154579,0.5247952,0.14506644,-1.1210067,-0.16479494,1.1210067,"down","TMEM127",55654.0,"0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0032007 // negative regulation of TOR signaling cascade // inferred from mutant phenotype","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr2:96915945-96931751 (-) // 87.52 // q11.2"]
["11737149_a_at",-0.0043621063,-0.0048422813,-0.013207912,0.017634392,0.0043621063,0.083747864,0.5431324,0.15900877,-1.0300533,-0.042718932,1.0300533,"down","ETNK1",55500.0,"0006646 // phosphatidylethanolamine biosynthetic process // inferred from direct assay /// 0006646 // phosphatidylethanolamine biosynthetic process // inferred from electronic annotation /// 0008654 // phospholipid biosynthetic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation","0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004305 // ethanolamine kinase activity // inferred from direct assay /// 0004305 // ethanolamine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0016773 // phosphotransferase activity, alcohol group as acceptor // inferred from electronic annotation","chr12:22778075-22797521 (+) // 92.71 // p12.1"]
["11722912_at",0.008324623,-0.0062150955,0.037299156,0.0062150955,-0.1066885,-0.061974525,0.50234604,0.12876208,1.0477434,0.067285486,1.0477434,"up","USP13",8975.0,"0006355 // regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006914 // autophagy // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from mutant phenotype /// 0010506 // regulation of autophagy // inferred from direct assay /// 0030318 // melanocyte differentiation // traceable author statement /// 0050821 // protein stabilization // inferred from direct assay /// 0070536 // protein K63-linked deubiquitination // inferred from direct assay","","0004197 // cysteine-type endopeptidase activity // inferred from mutant phenotype /// 0004197 // cysteine-type endopeptidase activity // traceable author statement /// 0004221 // ubiquitin thiolesterase activity // inferred from direct assay /// 0004221 // ubiquitin thiolesterase activity // inferred from electronic annotation /// 0004843 // ubiquitin-specific protease activity // inferred from direct assay /// 0004843 // ubiquitin-specific protease activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0008242 // omega peptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0043130 // ubiquitin binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:179370497-179507189 (+) // 83.41 // q26.33"]
["11725776_a_at",0.020795822,-0.2096591,-0.07003927,0.08256531,0.16928005,-0.020795822,0.50739026,0.13258564,-1.1198592,-0.16331738,1.1198592,"down","ATF7IP2 /// LOC100287628","100287628 /// 80063","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","","chr16:10479914-10577495 (+) // 84.92 // p13.2"]
["11718960_at",0.10242844,0.019539356,0.123799324,-0.0803175,-0.019539356,-0.027780533,0.29275492,0.028338267,1.0901058,0.124468125,1.0901058,"up","NUFIP2",57532.0,"","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0042788 // polysomal ribosome // inferred from direct assay","0003723 // RNA binding // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr17:27582857-27621166 (-) // 94.03 // q11.2"]
["11741098_a_at",0.010529757,-0.010529518,0.024625778,-0.057429552,-0.046202183,0.017549515,0.6071175,0.22117312,1.025909,0.036902692,1.025909,"up","A2ML1",144568.0,"0010466 // negative regulation of peptidase activity // inferred from direct assay /// 0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // inferred from electronic annotation /// 0052548 // regulation of endopeptidase activity // inferred from direct assay","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation","0004866 // endopeptidase inhibitor activity // inferred from electronic annotation /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0030414 // peptidase inhibitor activity // inferred from direct assay /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation","chr12:8975067-9029354 (+) // 92.32 // p13.31"]
["11739090_at",-0.010835648,0.002026558,-0.002026558,0.053359985,0.02241993,-0.01515007,0.673238,0.30297905,-1.0166491,-0.023821851,1.0166491,"down","LUC7L3",51747.0,"0006397 // mRNA processing // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from mutant phenotype /// 0006950 // response to stress // inferred from mutant phenotype /// 0008380 // RNA splicing // inferred from mutant phenotype /// 0008380 // RNA splicing // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005925 // focal adhesion // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003729 // mRNA binding // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction","chr17:48796975-48830072 (+) // 94.86 // q21.33"]
["11716016_at",-0.09658146,-0.16954231,-0.13076878,0.16434097,0.09658146,0.15646458,0.08519746,8.303336E-4,-1.2070007,-0.27142656,1.2070007,"down","MAL2",114569.0,"","0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr8:120220605-120257913 (+) // 88.06 // q24.12"]
["11736612_x_at",0.049734592,0.02794075,-0.0153717995,-0.0066509247,0.0066509247,-0.032011032,0.6161563,0.23040235,1.0220305,0.031438213,1.0220305,"up","KIAA1432",57589.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr9:5656582-5776555 (+) // 99.51 // p24.1"]
["11718896_x_at",-0.14926243,-0.12543392,-0.09222031,0.09221935,0.18709183,0.17028904,0.098513134,0.0012603549,-1.2076248,-0.27217227,1.2076248,"down","SPAG9",9043.0,"0000187 // activation of MAPK activity // inferred from electronic annotation /// 0007257 // activation of JUN kinase activity // inferred from electronic annotation /// 0007283 // spermatogenesis // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from mutant phenotype /// 0042147 // retrograde transport, endosome to Golgi // inferred from direct assay /// 0042692 // muscle cell differentiation // traceable author statement /// 0045666 // positive regulation of neuron differentiation // inferred from electronic annotation /// 0051149 // positive regulation of muscle cell differentiation // traceable author statement /// 0051260 // protein homooligomerization // inferred from electronic annotation /// 0090074 // negative regulation of protein homodimerization activity // inferred from electronic annotation","0001669 // acrosomal vesicle // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016021 // integral to membrane // traceable author statement /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0008432 // JUN kinase binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0019894 // kinesin binding // inferred from electronic annotation /// 0043548 // phosphatidylinositol 3-kinase binding // inferred from electronic annotation /// 0048273 // mitogen-activated protein kinase p38 binding // inferred from electronic annotation","chr17:49039536-49198226 (-) // 90.48 // q21.33"]
["11751411_x_at",-0.14856815,-0.033021927,0.117509365,0.0038261414,-0.0038261414,0.22440624,0.75340706,0.42118803,-1.0689262,-0.09616227,1.0689262,"down","CCDC64",92558.0,"0006810 // transport // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from sequence or structural similarity /// 0055107 // Golgi to secretory granule transport // inferred from sequence or structural similarity","0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from sequence or structural similarity /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation","0017137 // Rab GTPase binding // inferred from sequence or structural similarity /// 0034452 // dynactin binding // inferred from sequence or structural similarity","chr12:120502440-120531451 (+) // 99.85 // q24.23"]
["11749724_a_at",-0.06734753,-0.034479618,0.034479618,0.18507671,-0.12188053,0.12694263,0.760783,0.43403777,-1.0612973,-0.08582885,1.0612973,"down","MEGF9",1955.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005509 // calcium ion binding // non-traceable author statement","chr9:123367258-123476765 (-) // 97.48 // q33.2"]
["11757253_x_at",-0.020519257,-0.1443274,0.020519257,0.051088333,0.025235415,-0.11082697,0.86171633,0.6312077,-1.0256995,-0.03660812,1.0256995,"down","CDRT15P1",94158.0,"","","","chr17:13927814-13928915 (+) // 100.0 // p12 /// chr17:14139065-14140166 (-) // 98.73 // p12"]
["11756065_x_at",0.049556255,0.09946823,-0.05231428,-0.15564156,-0.038431644,0.038431644,0.67628187,0.30735603,1.0600389,0.08411724,1.0600389,"up","APOD",347.0,"0000302 // response to reactive oxygen species // inferred from direct assay /// 0000302 // response to reactive oxygen species // inferred from electronic annotation /// 0001525 // angiogenesis // non-traceable author statement /// 0006006 // glucose metabolic process // inferred from direct assay /// 0006629 // lipid metabolic process // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // non-traceable author statement /// 0007420 // brain development // inferred from sequence or structural similarity /// 0007568 // aging // non-traceable author statement /// 0010642 // negative regulation of platelet-derived growth factor receptor signaling pathway // inferred from direct assay /// 0014012 // peripheral nervous system axon regeneration // inferred from sequence or structural similarity /// 0042246 // tissue regeneration // inferred from sequence or structural similarity /// 0042308 // negative regulation of protein import into nucleus // inferred from direct assay /// 0042493 // response to drug // inferred from sequence or structural similarity /// 0048662 // negative regulation of smooth muscle cell proliferation // inferred from direct assay /// 0048678 // response to axon injury // inferred from sequence or structural similarity /// 0051895 // negative regulation of focal adhesion assembly // inferred from mutant phenotype /// 0060588 // negative regulation of lipoprotein lipid oxidation // inferred from direct assay /// 0060588 // negative regulation of lipoprotein lipid oxidation // inferred from electronic annotation /// 0071638 // negative regulation of monocyte chemotactic protein-1 production // inferred from direct assay /// 1900016 // negative regulation of cytokine production involved in inflammatory response // inferred from direct assay /// 2000098 // negative regulation of smooth muscle cell-matrix adhesion // inferred from mutant phenotype /// 2000405 // negative regulation of T cell migration // inferred from direct assay","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005622 // intracellular // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0022626 // cytosolic ribosome // inferred from sequence or structural similarity /// 0030425 // dendrite // inferred from sequence or structural similarity /// 0043025 // neuronal cell body // inferred from sequence or structural similarity /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0005215 // transporter activity // inferred from electronic annotation /// 0005319 // lipid transporter activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008289 // lipid binding // inferred from electronic annotation /// 0015485 // cholesterol binding // inferred from direct assay /// 0036094 // small molecule binding // inferred from electronic annotation","chr3:195295752-195298208 (-) // 100.0 // q29"]
["11726964_at",-0.10779452,0.013768673,0.02097392,0.18206453,-0.013768911,-0.21557307,0.9847063,0.9473056,-1.005973,-0.008591558,1.005973,"down","SYNGAP1",8831.0,"0007165 // signal transduction // inferred from electronic annotation /// 0032320 // positive regulation of Ras GTPase activity // not recorded /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0046580 // negative regulation of Ras protein signal transduction // not recorded /// 0046580 // negative regulation of Ras protein signal transduction // inferred from sequence or structural similarity /// 0048167 // regulation of synaptic plasticity // inferred from sequence or structural similarity /// 0051056 // regulation of small GTPase mediated signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // not recorded /// 0031235 // intrinsic to internal side of plasma membrane // not recorded","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005099 // Ras GTPase activator activity // not recorded /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from electronic annotation","chr6:33387846-33421466 (+) // 95.01 // p21.32"]
["11743384_at",-0.09674406,0.013858318,-0.24035883,0.03568077,0.02259636,-0.013858318,0.56278706,0.17790286,-1.0886607,-0.12255441,1.0886607,"down","PRPF40A",55660.0,"0006397 // mRNA processing // inferred from electronic annotation /// 0007010 // cytoskeleton organization // inferred from mutant phenotype /// 0007049 // cell cycle // inferred from electronic annotation /// 0008360 // regulation of cell shape // inferred from mutant phenotype /// 0008380 // RNA splicing // inferred from electronic annotation /// 0016477 // cell migration // inferred from mutant phenotype /// 0032465 // regulation of cytokinesis // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0016363 // nuclear matrix // inferred from direct assay /// 0016363 // nuclear matrix // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr2:153508103-153574511 (-) // 95.18 // q23.3"]
["11758718_x_at",-0.006207466,0.006207466,-0.06594086,0.10027504,0.041300774,-0.022727013,0.6031807,0.21568449,-1.04362,-0.061596483,1.04362,"down","ATP5E /// ATP5EP2 /// SLMO2-ATP5E","100533975 /// 432369 /// 514","0006200 // ATP catabolic process // inferred from direct assay /// 0006754 // ATP biosynthetic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0015986 // ATP synthesis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0042776 // mitochondrial ATP synthesis coupled proton transport // inferred by curator /// 0042776 // mitochondrial ATP synthesis coupled proton transport // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0000275 // mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) // inferred from electronic annotation /// 0005739 // mitochondrion // inferred by curator /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005753 // mitochondrial proton-transporting ATP synthase complex // inferred from direct assay /// 0005753 // mitochondrial proton-transporting ATP synthase complex // traceable author statement /// 0005759 // mitochondrial matrix // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0045261 // proton-transporting ATP synthase complex, catalytic core F(1) // inferred from electronic annotation","0016787 // hydrolase activity // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from direct assay /// 0022857 // transmembrane transporter activity // inferred by curator /// 0046933 // hydrogen ion transporting ATP synthase activity, rotational mechanism // inferred from electronic annotation /// 0046961 // proton-transporting ATPase activity, rotational mechanism // inferred from electronic annotation","chr20:57603739-57607410 (-) // 55.19 // q13.32"]
["11718063_a_at",-0.033265114,-0.04608059,-0.0046777725,0.064582825,0.011092186,0.0046777725,0.41144428,0.07234322,-1.0387094,-0.05479209,1.0387094,"down","C11orf48",79081.0,"","","","chr11:62430288-62439246 (-) // 97.28 // q12.3"]
["11751336_x_at",-0.033115387,-0.016875267,-0.0024900436,0.078463554,0.0024900436,0.051096916,0.3895653,0.061824117,-1.0435578,-0.06151046,1.0435578,"down","MKRN1",23608.0,"0016567 // protein ubiquitination // inferred from electronic annotation","","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:140153942-140179168 (-) // 91.08 // q34"]
["11724535_a_at",0.023391724,-0.023369312,0.16799688,0.0036611557,-0.0036611557,-0.11085892,0.6288524,0.24609207,1.0665557,0.09295936,1.0665557,"up","UBA5",79876.0,"0008152 // metabolic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0071569 // protein ufmylation // inferred from direct assay /// 0071569 // protein ufmylation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016235 // aggresome // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016616 // oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0048037 // cofactor binding // inferred from electronic annotation /// 0071566 // UFM1 activating enzyme activity // inferred from direct assay","chr3:132378309-132398963 (+) // 87.73 // q22.1"]
["11741614_x_at",-0.023515224,-0.1330967,0.07784653,-0.17235756,0.10095501,0.023514748,0.9761468,0.924191,-1.0071597,-0.010292476,1.0071597,"down","KLC2",64837.0,"0007018 // microtubule-based movement // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008088 // axon cargo transport // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005871 // kinesin complex // inferred from sequence or structural similarity /// 0005871 // kinesin complex // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0016938 // kinesin I complex // non-traceable author statement /// 0035253 // ciliary rootlet // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay","0003777 // microtubule motor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019894 // kinesin binding // inferred from sequence or structural similarity","chr11:66025173-66035332 (+) // 93.41 // q13.2"]
["11758709_s_at",-0.011982918,0.009986877,0.06815624,-0.009986877,0.03595829,-0.063614845,0.74414057,0.40734974,1.0242736,0.03460118,1.0242736,"up","RDH11",51109.0,"0001523 // retinoid metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008202 // steroid metabolic process // traceable author statement /// 0042572 // retinol metabolic process // inferred from sequence or structural similarity /// 0042574 // retinal metabolic process // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005622 // intracellular // inferred from sequence or structural similarity /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004745 // retinol dehydrogenase activity // inferred from sequence or structural similarity /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0052650 // NADP-retinol dehydrogenase activity // inferred from direct assay /// 0052650 // NADP-retinol dehydrogenase activity // inferred from electronic annotation","chr14:68143580-68143905 (-) // 93.66 // q24.1"]
["11747358_x_at",0.012499809,0.05422592,0.07258797,-0.012499809,-0.08932972,-0.021458626,0.34270862,0.04364479,1.0625523,0.0875339,1.0625523,"up","CIAPIN1",57019.0,"0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from sequence or structural similarity /// 0006916 // anti-apoptosis // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0030097 // hemopoiesis // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation","0008168 // methyltransferase activity // inferred from electronic annotation","chr16:57462099-57481310 (-) // 98.12 // q21"]
["11750516_a_at",0.009967804,-0.007703781,0.112807274,-0.0025186539,-0.02585888,0.0025186539,0.6633485,0.29023764,1.0330977,0.046976756,1.0330977,"up","ATPAF1",64756.0,"0006461 // protein complex assembly // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr1:47101379-47131527 (-) // 90.68 // p33"]
["11738356_s_at",0.09276056,-0.01883459,-0.02335763,0.018834352,0.2473526,-0.1497593,0.95591456,0.8650444,-1.015333,-0.021953048,1.015333,"down","OR4N2 /// OR4N3P","390429 /// 390539","0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr14:20295847-20296539 (+) // 95.27 // q11.2 /// chr15:22413701-22414393 (+) // 99.0 // q11.2"]
["11742813_at",-0.0035350323,-0.017300129,-0.16400385,0.0035350323,0.099889755,0.03857994,0.51288605,0.1363439,-1.0784415,-0.10894792,1.0784415,"down","SEMA6A",57556.0,"0001764 // neuron migration // inferred from electronic annotation /// 0006915 // apoptotic process // non-traceable author statement /// 0007010 // cytoskeleton organization // non-traceable author statement /// 0007166 // cell surface receptor signaling pathway // non-traceable author statement /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // non-traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0007411 // axon guidance // non-traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007411 // axon guidance // inferred from electronic annotation /// 0009887 // organ morphogenesis // non-traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0051642 // centrosome localization // inferred from electronic annotation /// 0071526 // semaphorin-plexin signaling pathway // inferred from electronic annotation /// 2001224 // positive regulation of neuron migration // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030424 // axon // non-traceable author statement","0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0030215 // semaphorin receptor binding // inferred from electronic annotation","chr5:115779250-115910709 (-) // 96.44 // q23.1"]
["11750829_at",-0.0031430721,0.0031430721,0.15198922,-0.0134551525,-0.14335656,0.29043508,0.9898109,0.9667841,1.0042524,0.0061219577,1.0042524,"up","LOC100653254",1.00653254E8,"","0005576 // extracellular region // inferred from electronic annotation","","chr19:3503617-4043154 (-) // 52.49 // p13.3"]
["11754848_a_at",-0.0026745796,-0.096716404,0.0026745796,-0.03665018,0.04782009,0.15911055,0.6273688,0.24417786,-1.0636319,-0.08899894,1.0636319,"down","ZNF169",169841.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:97061082-97065950 (+) // 54.82 // q22.32"]
["11757042_a_at",0.0708971,-0.15654254,0.11838889,-0.035439968,0.035439968,-0.14739895,0.8377156,0.58111805,1.0425,0.06004741,1.0425,"up","PDYN",5173.0,"0007218 // neuropeptide signaling pathway // inferred from electronic annotation /// 0007268 // synaptic transmission // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay","0001515 // opioid peptide activity // inferred from electronic annotation","chr20:1960788-1974802 (-) // 99.51 // p13"]
["11718095_s_at",-0.060113907,-0.033304214,-0.01881361,0.095088005,0.018814087,0.11868954,0.2759322,0.024029069,-1.0829308,-0.11494106,1.0829308,"down","RNF38",152006.0,"","","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:36336396-36400920 (-) // 98.09 // p13.2"]
["11757498_s_at",0.082782745,0.06923294,0.05682087,-0.070521355,-0.18522835,-0.05682087,0.22368346,0.013712188,1.1280276,0.17380232,1.1280276,"up","TMEM106C",79022.0,"","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr12:48362248-48362661 (+) // 92.47 // q13.11"]
["11724734_at",0.02696228,0.045046806,-0.077996254,0.0111413,-0.0111413,-0.03883648,0.9342806,0.80257744,1.0076187,0.010949752,1.0076187,"up","ABCB8",11194.0,"0006200 // ATP catabolic process // inferred from electronic annotation /// 0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0055085 // transmembrane transport // not recorded /// 0055085 // transmembrane transport // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005740 // mitochondrial envelope // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // not recorded /// 0016021 // integral to membrane // inferred from electronic annotation /// 0043190 // ATP-binding cassette (ABC) transporter complex // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0005215 // transporter activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0005524 // ATP binding // traceable author statement /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0042626 // ATPase activity, coupled to transmembrane movement of substances // not recorded /// 0042626 // ATPase activity, coupled to transmembrane movement of substances // inferred from electronic annotation","chr7:150725511-150744869 (+) // 91.53 // q36.1"]
["11744480_s_at",-0.005842209,-0.12462616,0.035077095,0.061175346,-0.020311356,0.005842209,0.75725746,0.42662132,-1.0333763,-0.04736575,1.0333763,"down","RAB18",22931.0,"0001654 // eye development // inferred from sequence or structural similarity /// 0006184 // GTP catabolic process // non-traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006897 // endocytosis // non-traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // non-traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007420 // brain development // inferred from sequence or structural similarity /// 0015031 // protein transport // inferred from electronic annotation","0005622 // intracellular // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // non-traceable author statement /// 0005525 // GTP binding // inferred from electronic annotation","chr10:27817393-27829153 (+) // 87.22 // p12.1"]
["11761688_at",-0.0039288998,-0.0039288998,-0.11692953,0.0039288998,0.041804075,0.09281111,0.5003026,0.1267229,-1.0627315,-0.08777715,1.0627315,"down","","","","","","chr6:21081886-21083374 (+) // 32.57 // p22.3"]
["11724553_at",-0.039114952,0.004302025,0.15444183,0.045274258,-0.004302025,-0.058304787,0.8121957,0.52612835,1.0321509,0.045653857,1.0321509,"up","PCGF5",84333.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0031519 // PcG protein complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr10:92979933-93044086 (+) // 92.97 // q23.32"]
["11722188_at",0.07756615,-0.03064394,0.18025112,-0.26433706,0.030643463,-0.16027212,0.49412388,0.12166423,1.1543225,0.20704634,1.1543225,"up","MTDH",92140.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0010508 // positive regulation of autophagy // inferred from direct assay /// 0031663 // lipopolysaccharide-mediated signaling pathway // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from direct assay /// 0045766 // positive regulation of angiogenesis // inferred from direct assay /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0051897 // positive regulation of protein kinase B signaling cascade // inferred from direct assay /// 0070830 // tight junction assembly // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from sequence or structural similarity /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005923 // tight junction // inferred from sequence or structural similarity /// 0005923 // tight junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from sequence or structural similarity /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0016604 // nuclear body // inferred from direct assay /// 0030054 // cell junction // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation /// 0046581 // intercellular canaliculus // inferred from sequence or structural similarity /// 0046581 // intercellular canaliculus // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0001085 // RNA polymerase II transcription factor binding // inferred from physical interaction /// 0003713 // transcription coactivator activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0051059 // NF-kappaB binding // inferred from physical interaction","chr8:98656369-98742488 (+) // 77.52 // q22.1"]
["11733186_at",0.0,-0.095277786,0.0374341,0.0,-0.0093541145,0.0,0.8935903,0.70425326,-1.0112665,-0.016163198,1.0112665,"down","OSMR",9180.0,"0002675 // positive regulation of acute inflammatory response // inferred by curator /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from genetic interaction /// 0019221 // cytokine-mediated signaling pathway // inferred from electronic annotation /// 0034097 // response to cytokine stimulus // inferred from direct assay /// 0038165 // oncostatin-M-mediated signaling pathway // inferred from direct assay /// 0038165 // oncostatin-M-mediated signaling pathway // inferred from electronic annotation","0005900 // oncostatin-M receptor complex // inferred from direct assay /// 0005900 // oncostatin-M receptor complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004896 // cytokine receptor activity // inferred from electronic annotation /// 0004924 // oncostatin-M receptor activity // inferred from direct assay /// 0004924 // oncostatin-M receptor activity // inferred from electronic annotation /// 0004924 // oncostatin-M receptor activity // traceable author statement /// 0019838 // growth factor binding // inferred from physical interaction","chr5:38846100-38934888 (+) // 92.57 // p13.1"]
["11761793_a_at",0.10955858,-0.08761716,0.019846678,-0.114774704,0.032476187,-0.019846916,0.8183544,0.5387272,1.0338149,0.04797791,1.0338149,"up","FAM122C",159091.0,"","","","chrX:133941299-133955985 (+) // 83.02 // q26.3"]
["11726094_at",0.022325039,-0.007464409,0.13746738,0.007464409,-0.0127158165,-0.03689909,0.6167138,0.2316649,1.0459589,0.06482613,1.0459589,"up","KANK3",256949.0,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006364 // rRNA processing // inferred from mutant phenotype /// 0006412 // translation // inferred by curator /// 0006412 // translation // inferred from electronic annotation /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral infectious cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0042274 // ribosomal small subunit biogenesis // inferred from mutant phenotype /// 0044267 // cellular protein metabolic process // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0015935 // small ribosomal subunit // inferred from direct assay /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003735 // structural constituent of ribosome // inferred from electronic annotation","chr19:8387468-8408146 (-) // 93.81 // p13.2"]
["11759115_x_at",-0.1535244,0.0,0.0,-0.0035614967,0.09582281,0.16263199,0.49837503,0.12509502,-1.0989603,-0.13613924,1.0989603,"down","GMCL1",64395.0,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0016363 // nuclear matrix // inferred from electronic annotation","","chr2:70056737-70107507 (+) // 98.76 // p13.3"]
["11747046_x_at",-0.0024957657,1.6880035E-4,0.08106327,-1.6880035E-4,0.090675354,-0.012478828,0.99854743,0.9958361,1.0001637,2.3611286E-4,1.0001637,"up","CAPZA2",830.0,"0006461 // protein complex assembly // traceable author statement /// 0006928 // cellular component movement // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0051693 // actin filament capping // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0008290 // F-actin capping protein complex // inferred from electronic annotation /// 0008290 // F-actin capping protein complex // traceable author statement /// 0015629 // actin cytoskeleton // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030863 // cortical cytoskeleton // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation","chr7:116502612-116558717 (+) // 98.38 // q31.2"]
["11737929_a_at",0.017068148,-0.052434444,-0.12888694,0.08212471,0.075709105,-0.017068148,0.50073946,0.12724625,-1.073017,-0.10167293,1.073017,"down","FSHB",2488.0,"0001541 // ovarian follicle development // non-traceable author statement /// 0006701 // progesterone biosynthetic process // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from expression pattern /// 0007283 // spermatogenesis // non-traceable author statement /// 0007292 // female gamete generation // traceable author statement /// 0007565 // female pregnancy // traceable author statement /// 0016486 // peptide hormone processing // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0060011 // Sertoli cell proliferation // inferred from electronic annotation","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005625 // soluble fraction // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay","0005179 // hormone activity // traceable author statement /// 0005179 // hormone activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016913 // follicle-stimulating hormone activity // non-traceable author statement /// 0046982 // protein heterodimerization activity // non-traceable author statement","chr11:30252562-30256824 (+) // 94.73 // p14.1"]
["11744268_a_at",-0.019469261,0.035894394,0.019469261,-0.035369873,-0.06636715,0.05396366,0.8089505,0.52041745,1.0195194,0.027889296,1.0195194,"up","GIPC1",10755.0,"0006605 // protein targeting // inferred from sequence or structural similarity /// 0006605 // protein targeting // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // non-traceable author statement /// 0007268 // synaptic transmission // inferred from sequence or structural similarity /// 0007268 // synaptic transmission // inferred from electronic annotation /// 0014047 // glutamate secretion // inferred from sequence or structural similarity /// 0014047 // glutamate secretion // inferred from electronic annotation /// 0030511 // positive regulation of transforming growth factor beta receptor signaling pathway // inferred from sequence or structural similarity /// 0030511 // positive regulation of transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0031647 // regulation of protein stability // inferred from sequence or structural similarity /// 0031647 // regulation of protein stability // inferred from electronic annotation /// 0032435 // negative regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from sequence or structural similarity /// 0032435 // negative regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0043542 // endothelial cell migration // inferred from sequence or structural similarity /// 0043542 // endothelial cell migration // inferred from electronic annotation /// 0048167 // regulation of synaptic plasticity // inferred from sequence or structural similarity /// 0048167 // regulation of synaptic plasticity // inferred from electronic annotation","0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // inferred from electronic annotation /// 0005903 // brush border // inferred from electronic annotation /// 0005938 // cell cortex // inferred from direct assay /// 0008021 // synaptic vesicle // inferred from sequence or structural similarity /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0012506 // vesicle membrane // inferred from sequence or structural similarity /// 0012506 // vesicle membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from direct assay /// 0030139 // endocytic vesicle // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from sequence or structural similarity /// 0043197 // dendritic spine // inferred from electronic annotation /// 0043198 // dendritic shaft // inferred from sequence or structural similarity /// 0043198 // dendritic shaft // inferred from electronic annotation /// 0044445 // cytosolic part // inferred from electronic annotation","0003779 // actin binding // inferred from sequence or structural similarity /// 0003779 // actin binding // inferred from electronic annotation /// 0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0017022 // myosin binding // inferred from sequence or structural similarity /// 0017022 // myosin binding // inferred from electronic annotation /// 0030165 // PDZ domain binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from sequence or structural similarity /// 0042803 // protein homodimerization activity // inferred from electronic annotation","chr19:14588573-14593820 (-) // 80.61 // p13.12"]
["11721394_a_at",0.02078724,0.00197649,-0.09525633,0.05816984,-0.026878357,-0.00197649,0.78995055,0.4829741,-1.0238013,-0.03393578,1.0238013,"down","DTNBP1",84062.0,"0006892 // post-Golgi vesicle-mediated transport // traceable author statement /// 0006996 // organelle organization // inferred from electronic annotation /// 0007596 // blood coagulation // inferred from electronic annotation /// 0016044 // cellular membrane organization // traceable author statement /// 0031175 // neuron projection development // inferred from direct assay /// 0031532 // actin cytoskeleton reorganization // inferred from sequence or structural similarity /// 0031532 // actin cytoskeleton reorganization // inferred from electronic annotation /// 0032438 // melanosome organization // non-traceable author statement /// 0048812 // neuron projection morphogenesis // inferred from sequence or structural similarity /// 0048812 // neuron projection morphogenesis // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0060155 // platelet dense granule organization // inferred from electronic annotation /// 0060159 // regulation of dopamine receptor signaling pathway // inferred from sequence or structural similarity","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from sequence or structural similarity /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from direct assay /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016528 // sarcoplasm // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030424 // axon // inferred from sequence or structural similarity /// 0030424 // axon // inferred from electronic annotation /// 0030426 // growth cone // inferred from sequence or structural similarity /// 0030426 // growth cone // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0030672 // synaptic vesicle membrane // inferred from direct assay /// 0030672 // synaptic vesicle membrane // inferred from sequence or structural similarity /// 0030672 // synaptic vesicle membrane // inferred from electronic annotation /// 0031083 // BLOC-1 complex // inferred from direct assay /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0033162 // melanosome membrane // inferred from electronic annotation /// 0033267 // axon part // inferred from sequence or structural similarity /// 0033267 // axon part // inferred from electronic annotation /// 0042383 // sarcolemma // inferred from sequence or structural similarity /// 0042383 // sarcolemma // inferred from electronic annotation /// 0043005 // neuron projection // inferred from direct assay /// 0043197 // dendritic spine // inferred from sequence or structural similarity /// 0043197 // dendritic spine // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr6:15523037-15663271 (-) // 88.11 // p22.3"]
["11733182_a_at",0.03533125,-0.014743805,0.014743805,-0.2083025,-0.11445761,0.06309557,0.6641387,0.29098672,1.070535,0.09833189,1.070535,"up","ETV1",2115.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0048935 // peripheral nervous system neuron development // traceable author statement","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr7:13930852-14029291 (-) // 92.33 // p21.2"]
["11754511_a_at",0.09920454,0.07105875,-0.006989002,-0.016462326,0.006989479,-0.10382986,0.48736212,0.117422745,1.0659889,0.09219241,1.0659889,"up","AXIN1",8312.0,"0000209 // protein polyubiquitination // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001743 // optic placode formation // not recorded /// 0001932 // regulation of protein phosphorylation // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from direct assay /// 0001934 // positive regulation of protein phosphorylation // inferred from electronic annotation /// 0006913 // nucleocytoplasmic transport // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007165 // signal transduction // inferred from direct assay /// 0007165 // signal transduction // inferred from electronic annotation /// 0007257 // activation of JUN kinase activity // not recorded /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007368 // determination of left/right symmetry // not recorded /// 0007605 // sensory perception of sound // inferred from electronic annotation /// 0008219 // cell death // not recorded /// 0009950 // dorsal/ventral axis specification // not recorded /// 0009950 // dorsal/ventral axis specification // inferred from electronic annotation /// 0009953 // dorsal/ventral pattern formation // inferred from electronic annotation /// 0010800 // positive regulation of peptidyl-threonine phosphorylation // inferred from direct assay /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0021797 // forebrain anterior/posterior pattern specification // not recorded /// 0021881 // Wnt receptor signaling pathway involved in forebrain neuron fate commitment // not recorded /// 0030163 // protein catabolic process // inferred from electronic annotation /// 0030178 // negative regulation of Wnt receptor signaling pathway // inferred from direct assay /// 0030178 // negative regulation of Wnt receptor signaling pathway // inferred from electronic annotation /// 0030511 // positive regulation of transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0030910 // olfactory placode formation // not recorded /// 0031122 // cytoplasmic microtubule organization // not recorded /// 0031122 // cytoplasmic microtubule organization // inferred from electronic annotation /// 0031398 // positive regulation of protein ubiquitination // inferred from direct assay /// 0031398 // positive regulation of protein ubiquitination // inferred from electronic annotation /// 0032147 // activation of protein kinase activity // inferred from direct assay /// 0032436 // positive regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from direct assay /// 0034244 // negative regulation of transcription elongation from RNA polymerase II promoter // inferred from electronic annotation /// 0035121 // tail morphogenesis // not recorded /// 0035121 // tail morphogenesis // inferred from electronic annotation /// 0035412 // regulation of catenin import into nucleus // not recorded /// 0035412 // regulation of catenin import into nucleus // inferred from electronic annotation /// 0038032 // termination of G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0043507 // positive regulation of JUN kinase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // not recorded /// 0043623 // cellular protein complex assembly // inferred from direct assay /// 0045599 // negative regulation of fat cell differentiation // not recorded /// 0045599 // negative regulation of fat cell differentiation // inferred from electronic annotation /// 0045732 // positive regulation of protein catabolic process // inferred by curator /// 0045732 // positive regulation of protein catabolic process // inferred from direct assay /// 0045860 // positive regulation of protein kinase activity // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0046330 // positive regulation of JNK cascade // inferred from sequence or structural similarity /// 0046330 // positive regulation of JNK cascade // inferred from electronic annotation /// 0048048 // embryonic eye morphogenesis // not recorded /// 0048318 // axial mesoderm development // inferred from electronic annotation /// 0048320 // axial mesoderm formation // not recorded /// 0048320 // axial mesoderm formation // inferred from electronic annotation /// 0051248 // negative regulation of protein metabolic process // inferred from electronic annotation /// 0051260 // protein homooligomerization // inferred from electronic annotation /// 0051443 // positive regulation of ubiquitin-protein ligase activity // inferred from mutant phenotype /// 0055001 // muscle cell development // not recorded /// 0060070 // canonical Wnt receptor signaling pathway // inferred by curator /// 0060070 // canonical Wnt receptor signaling pathway // inferred from electronic annotation /// 0060272 // embryonic skeletal joint morphogenesis // not recorded /// 0060823 // canonical Wnt receptor signaling pathway involved in neural plate anterior/posterior pattern formation // not recorded /// 0071407 // cellular response to organic cyclic compound // not recorded /// 0071514 // genetic imprinting // inferred from electronic annotation /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // not recorded /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from electronic annotation /// 0090244 // Wnt receptor signaling pathway involved in somitogenesis // not recorded /// 2000060 // positive regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process // inferred from sequence or structural similarity /// 2000060 // positive regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005881 // cytoplasmic microtubule // not recorded /// 0005881 // cytoplasmic microtubule // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005938 // cell cortex // not recorded /// 0005938 // cell cortex // inferred from electronic annotation /// 0014069 // postsynaptic density // not recorded /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // not recorded /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0016328 // lateral plasma membrane // inferred from direct assay /// 0030877 // beta-catenin destruction complex // inferred from direct assay /// 0031410 // cytoplasmic vesicle // inferred from sequence or structural similarity /// 0034742 // APC-Axin-1-beta-catenin complex // inferred from direct assay /// 0034747 // Axin-APC-beta-catenin-GSK3B complex // inferred from direct assay /// 0034747 // Axin-APC-beta-catenin-GSK3B complex // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0044444 // cytoplasmic part // inferred from electronic annotation /// 0044459 // plasma membrane part // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0071944 // cell periphery // inferred from direct assay","0002039 // p53 binding // inferred from direct assay /// 0004871 // signal transducer activity // inferred from direct assay /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005096 // GTPase activator activity // not recorded /// 0005515 // protein binding // inferred from physical interaction /// 0008013 // beta-catenin binding // inferred from direct assay /// 0008013 // beta-catenin binding // inferred from physical interaction /// 0008013 // beta-catenin binding // inferred from electronic annotation /// 0008022 // protein C-terminus binding // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0019901 // protein kinase binding // not recorded /// 0019901 // protein kinase binding // inferred from direct assay /// 0019901 // protein kinase binding // inferred from sequence or structural similarity /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from electronic annotation /// 0032947 // protein complex scaffold // inferred from direct assay /// 0032947 // protein complex scaffold // inferred from mutant phenotype /// 0042802 // identical protein binding // inferred from sequence or structural similarity /// 0042802 // identical protein binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from sequence or structural similarity /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0043621 // protein self-association // inferred from electronic annotation /// 0046332 // SMAD binding // inferred from physical interaction /// 0070016 // armadillo repeat domain binding // not recorded /// 0070016 // armadillo repeat domain binding // inferred from sequence or structural similarity /// 0070411 // I-SMAD binding // inferred from physical interaction /// 0070411 // I-SMAD binding // inferred from electronic annotation /// 0070412 // R-SMAD binding // inferred from electronic annotation","chr16:337440-397107 (-) // 99.43 // p13.3"]
["11726066_a_at",-0.024942398,0.024942398,0.11597538,-0.06431818,-0.04492426,0.14678097,0.9161767,0.7572728,1.018288,0.026145676,1.018288,"up","BUD13",84811.0,"0000398 // nuclear mRNA splicing, via spliceosome // inferred from sequence or structural similarity /// 0006406 // mRNA export from nucleus // inferred from sequence or structural similarity","0070274 // RES complex // inferred from sequence or structural similarity","","chr11:116618885-116643714 (-) // 96.88 // q23.3"]
["11720625_a_at",0.02278614,-0.026361465,0.04314232,-0.02278614,0.031636238,-0.031502724,0.80196416,0.50797725,1.0144796,0.020739907,1.0144796,"up","MAT2B",27430.0,"0000096 // sulfur amino acid metabolic process // traceable author statement /// 0006556 // S-adenosylmethionine biosynthetic process // inferred from direct assay /// 0006556 // S-adenosylmethionine biosynthetic process // inferred from electronic annotation /// 0006730 // one-carbon metabolic process // inferred from electronic annotation /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0032259 // methylation // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044237 // cellular metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0045226 // extracellular polysaccharide biosynthetic process // inferred from electronic annotation","0005622 // intracellular // inferred by curator /// 0005634 // nucleus // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0048269 // methionine adenosyltransferase complex // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008831 // dTDP-4-dehydrorhamnose reductase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0048270 // methionine adenosyltransferase regulator activity // inferred from direct assay /// 0050662 // coenzyme binding // inferred from electronic annotation","chr5:162930100-162946306 (+) // 97.02 // q34"]
["11750010_a_at",0.036467552,0.0652442,-0.030299187,0.03029871,-0.25006342,-0.14614677,0.5513275,0.16754994,1.1063246,0.14577468,1.1063246,"up","WHSC1",7468.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0003149 // membranous septum morphogenesis // inferred from electronic annotation /// 0003289 // atrial septum primum morphogenesis // inferred from electronic annotation /// 0003290 // atrial septum secundum morphogenesis // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0016568 // chromatin modification // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation /// 0034968 // histone lysine methylation // inferred from electronic annotation /// 0060348 // bone development // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0018024 // histone-lysine N-methyltransferase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr4:1889227-1913879 (+) // 81.68 // p16.3"]
["11730119_at",0.042860508,-0.015031815,0.002105713,-0.10595703,-0.002105713,0.022263527,0.75196856,0.41934863,1.0271009,0.038577944,1.0271009,"up","CLDND2",125875.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr19:51870353-51872257 (-) // 94.28 // q13.41"]
["11754799_s_at",-0.01761818,-0.058437347,0.01761818,-0.024849892,0.06554031,0.021137238,0.67476004,0.30513188,-1.0281768,-0.04008834,1.0281768,"down","NMD3",51068.0,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","","chr3:160939097-160969796 (+) // 99.62 // q26.1"]
["11745936_a_at",-0.039378166,-0.021648407,0.004675865,0.029595375,-0.004675865,0.007780075,0.5210733,0.14179058,-1.0207881,-0.029683378,1.0207881,"down","SLC50A1",55974.0,"0006310 // DNA recombination // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0008643 // carbohydrate transport // inferred from electronic annotation /// 0042946 // glucoside transport // inferred from direct assay /// 0045815 // positive regulation of gene expression, epigenetic // inferred from sequence or structural similarity /// 0045815 // positive regulation of gene expression, epigenetic // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005634 // nucleus // inferred by curator /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0012505 // endomembrane system // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0042947 // glucoside transmembrane transporter activity // inferred from direct assay","chr1:155108287-155111020 (+) // 93.11 // q22"]
["11731919_a_at",-0.06215,-0.042515755,0.003862381,-0.003862381,0.019493103,0.010083199,0.4781662,0.11144572,-1.0296631,-0.042172354,1.0296631,"down","TMPO",7112.0,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0000785 // chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005635 // nuclear envelope // traceable author statement /// 0005637 // nuclear inner membrane // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005521 // lamin binding // traceable author statement","chr12:98909408-98942735 (+) // 94.1 // q23.1"]
["11745599_at",-0.0013170242,0.0013170242,0.09967518,-0.00920105,0.11641216,-0.053322792,0.9380853,0.8139948,1.0106351,0.015262245,1.0106351,"up","ANXA2P3",305.0,"0001501 // skeletal system development // traceable author statement /// 0001525 // angiogenesis // inferred from electronic annotation /// 0001525 // angiogenesis // inferred from expression pattern /// 0007589 // body fluid secretion // inferred from electronic annotation /// 0030199 // collagen fibril organization // inferred from electronic annotation /// 0031340 // positive regulation of vesicle fusion // inferred from direct assay /// 0042730 // fibrinolysis // inferred from electronic annotation /// 0051099 // positive regulation of binding // inferred from electronic annotation /// 0071229 // cellular response to acid // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005604 // basement membrane // inferred from electronic annotation /// 0005625 // soluble fraction // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0005811 // lipid particle // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0019897 // extrinsic to plasma membrane // inferred from electronic annotation /// 0030496 // midbody // inferred from direct assay /// 0031012 // extracellular matrix // inferred from sequence or structural similarity /// 0035749 // myelin sheath adaxonal region // inferred from electronic annotation /// 0042383 // sarcolemma // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0043220 // Schmidt-Lanterman incisure // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0004859 // phospholipase inhibitor activity // inferred from electronic annotation /// 0004859 // phospholipase inhibitor activity // traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005544 // calcium-dependent phospholipid binding // inferred from electronic annotation /// 0005544 // calcium-dependent phospholipid binding // inferred from direct assay /// 0005546 // phosphatidylinositol-4,5-bisphosphate binding // inferred from electronic annotation /// 0008092 // cytoskeletal protein binding // inferred from electronic annotation /// 0017137 // Rab GTPase binding // inferred from electronic annotation","chr10:66585284-66586638 (+) // 96.78 // q21.3"]
["11730088_x_at",-0.10507059,0.0068879128,-0.26237488,-0.0068879128,0.047574997,0.03483677,0.5220868,0.14265333,-1.106007,-0.14536048,1.106007,"down","DLGAP3",58512.0,"0007267 // cell-cell signaling // inferred from electronic annotation","0005624 // membrane fraction // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0001540 // beta-amyloid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from electronic annotation","chr1:35331037-35370984 (-) // 94.02 // p34.3"]
["11727413_at",0.10467672,-0.08247614,-0.16478848,0.011723042,-0.011723042,0.08732891,0.75174934,0.41895244,-1.0545584,-0.07663899,1.0545584,"down","CLN8",2055.0,"0001306 // age-dependent response to oxidative stress // inferred from electronic annotation /// 0006644 // phospholipid metabolic process // inferred from mutant phenotype /// 0006644 // phospholipid metabolic process // inferred from electronic annotation /// 0006672 // ceramide metabolic process // inferred from mutant phenotype /// 0006869 // lipid transport // non-traceable author statement /// 0007006 // mitochondrial membrane organization // inferred from electronic annotation /// 0007040 // lysosome organization // inferred from electronic annotation /// 0007399 // nervous system development // inferred from mutant phenotype /// 0007601 // visual perception // inferred from electronic annotation /// 0007628 // adult walking behavior // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // inferred from mutant phenotype /// 0008219 // cell death // inferred from electronic annotation /// 0008306 // associative learning // inferred from electronic annotation /// 0008344 // adult locomotory behavior // inferred from electronic annotation /// 0008361 // regulation of cell size // inferred from electronic annotation /// 0008610 // lipid biosynthetic process // non-traceable author statement /// 0021522 // spinal cord motor neuron differentiation // inferred from electronic annotation /// 0021523 // somatic motor neuron differentiation // inferred from electronic annotation /// 0030163 // protein catabolic process // non-traceable author statement /// 0035176 // social behavior // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0044257 // cellular protein catabolic process // inferred from electronic annotation /// 0044265 // cellular macromolecule catabolic process // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // inferred from electronic annotation /// 0045494 // photoreceptor cell maintenance // inferred from electronic annotation /// 0045861 // negative regulation of proteolysis // non-traceable author statement /// 0046513 // ceramide biosynthetic process // non-traceable author statement /// 0050881 // musculoskeletal movement // inferred from electronic annotation /// 0050884 // neuromuscular process controlling posture // inferred from electronic annotation /// 0050885 // neuromuscular process controlling balance // inferred from electronic annotation /// 0051348 // negative regulation of transferase activity // inferred from electronic annotation /// 0051935 // glutamate uptake involved in synaptic transmission // inferred from electronic annotation /// 0060041 // retina development in camera-type eye // inferred from electronic annotation /// 0060052 // neurofilament cytoskeleton organization // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0033116 // endoplasmic reticulum-Golgi intermediate compartment membrane // inferred from electronic annotation","","chr8:1711869-1734735 (+) // 76.41 // p23.3"]
["11727446_a_at",-0.06705403,0.030843496,0.013762474,-0.013762236,-0.13161993,0.047432423,0.8908395,0.699231,1.0175977,0.025167279,1.0175977,"up","PTPN5",84867.0,"0006470 // protein dephosphorylation // traceable author statement /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // traceable author statement /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0001784 // phosphotyrosine binding // inferred from direct assay /// 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // traceable author statement /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation","chr11:18749478-18813389 (-) // 92.63 // p15.1"]
["11744704_s_at",-0.032271385,0.051768303,0.049303055,-0.01846838,0.01846838,-0.019982815,0.7292421,0.3845702,1.020725,0.02959425,1.020725,"up","GOLGA3",2802.0,"0006891 // intra-Golgi vesicle-mediated transport // non-traceable author statement","0000139 // Golgi membrane // traceable author statement /// 0000139 // Golgi membrane // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005794 // Golgi apparatus // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0017119 // Golgi transport complex // inferred from direct assay /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation","0005215 // transporter activity // non-traceable author statement","chr12:133345499-133404998 (-) // 94.98 // q24.33"]
["11747128_a_at",0.19259882,0.21378994,-0.017001629,0.017002106,-0.08923864,-0.0682106,0.4467137,0.09327429,1.1302261,0.17661145,1.1302261,"up","PHTF2",57157.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation","chr7:77535577-77567521 (+) // 89.24 // q21.11"]
["11739305_a_at",0.27300453,0.15058231,0.26556492,-0.18179798,-0.24285793,-0.15058231,0.08755459,9.2812895E-4,1.3392853,0.42146328,1.3392853,"up","WRB",7485.0,"","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr21:40752212-40769814 (+) // 99.43 // q22.2"]
["11722324_a_at",0.031972885,0.09918785,0.10633373,-0.10685253,-0.09394169,-0.031972885,0.18887338,0.009058428,1.114776,0.15675387,1.114776,"up","ZNF84",7637.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:133613877-133639885 (+) // 90.47 // q24.33"]
["11729373_a_at",-0.03856039,0.07289076,-0.010647774,0.010647774,0.06599808,-0.040946007,0.9799016,0.93414557,-1.0027804,-0.004005757,1.0027804,"down","KCNIP2",30819.0,"0005513 // detection of calcium ion // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006813 // potassium ion transport // traceable author statement /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0006936 // muscle contraction // non-traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007268 // synaptic transmission // non-traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0008016 // regulation of heart contraction // traceable author statement /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0045163 // clustering of voltage-gated potassium channels // inferred from direct assay /// 0071805 // potassium ion transmembrane transport // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0008076 // voltage-gated potassium channel complex // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005250 // A-type (transient outward) potassium channel activity // traceable author statement /// 0005267 // potassium channel activity // inferred from electronic annotation /// 0005509 // calcium ion binding // traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0046923 // ER retention sequence binding // non-traceable author statement /// 0047485 // protein N-terminus binding // inferred from physical interaction","chr10:103585728-103603677 (-) // 97.2 // q24.32"]
["11744487_x_at",-0.012182236,2.3651123E-4,0.06899643,-2.3651123E-4,0.020323753,-0.04637432,0.7609513,0.43477884,1.0194417,0.027779305,1.0194417,"up","CNBP",7555.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006695 // cholesterol biosynthetic process // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from sequence or structural similarity /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003697 // single-stranded DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003727 // single-stranded RNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:128888419-128902753 (-) // 97.89 // q21.3"]
["11719106_a_at",0.10759592,0.0039711,0.060016632,-0.0039711,-0.021849632,-0.040011883,0.40081874,0.067034386,1.0563872,0.0791387,1.0563872,"up","ELMO2",63916.0,"0006909 // phagocytosis // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0060326 // cell chemotaxis // inferred from mutant phenotype","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0010333 // terpene synthase activity // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0030971 // receptor tyrosine kinase binding // inferred from physical interaction","chr20:44994688-45035690 (-) // 97.76 // q13.12"]
["11752963_a_at",0.31417084,-0.1305108,-0.2702055,0.1305108,-0.13092613,0.54576063,0.78264254,0.47012424,-1.1571937,-0.21063033,1.1571937,"down","SLC25A30",253512.0,"0006810 // transport // inferred from electronic annotation /// 0006839 // mitochondrial transport // inferred from electronic annotation","0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation","","chr13:45969618-45992515 (-) // 99.78 // q14.13"]
["11726370_a_at",0.1393838,-0.050679684,0.03175211,-0.019431114,-0.036376476,0.019431114,0.7484818,0.4143371,1.0369005,0.05227749,1.0369005,"up","BACH1 /// GRIK1-AS2","100379661 /// 571","0000083 // regulation of transcription involved in G1/S phase of mitotic cell cycle // inferred from mutant phenotype /// 0000117 // regulation of transcription involved in G2/M-phase of mitotic cell cycle // inferred from mutant phenotype /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0061418 // regulation of transcription from RNA polymerase II promoter in response to hypoxia // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay","0001078 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription // inferred from direct assay /// 0001078 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription // inferred from mutant phenotype /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0020037 // heme binding // non-traceable author statement /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation","chr21:30671736-30718598 (+) // 96.38 // q21.3"]
["11751367_a_at",0.098061085,-0.03434229,-0.05970192,-0.09789801,0.206182,0.03434229,0.8790971,0.67020035,-1.0325439,-0.046203118,1.0325439,"down","EDEM1",9695.0,"0006457 // protein folding // traceable author statement /// 0006986 // response to unfolded protein // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0030433 // ER-associated protein catabolic process // inferred from sequence or structural similarity /// 0030433 // ER-associated protein catabolic process // inferred from electronic annotation /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030176 // integral to endoplasmic reticulum membrane // inferred from sequence or structural similarity /// 0030176 // integral to endoplasmic reticulum membrane // inferred from electronic annotation","0004571 // mannosyl-oligosaccharide 1,2-alpha-mannosidase activity // inferred from direct assay /// 0004571 // mannosyl-oligosaccharide 1,2-alpha-mannosidase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0051787 // misfolded protein binding // inferred from direct assay","chr3:5230033-5252983 (+) // 99.93 // p26.1"]
["11736321_a_at",-0.06965494,-0.009575844,0.009575844,0.12950516,-0.09220028,0.009575844,0.84775347,0.60031825,-1.0272912,-0.038845163,1.0272912,"down","ANKRD26",22852.0,"","0005813 // centrosome // inferred from direct assay","","chr10:27293283-27389427 (-) // 78.49 // p12.1"]
["11733947_at",0.1433382,0.011814833,-0.17278719,-0.22665,-0.011814594,0.01581955,0.8466804,0.5980047,1.0485073,0.06833695,1.0485073,"up","EIF5AL1",143244.0,"0006412 // translation // inferred from electronic annotation /// 0006414 // translational elongation // inferred from electronic annotation /// 0006452 // translational frameshifting // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0008612 // peptidyl-lysine modification to hypusine // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0045901 // positive regulation of translational elongation // inferred from electronic annotation /// 0045905 // positive regulation of translational termination // inferred from electronic annotation /// 0051028 // mRNA transport // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005643 // nuclear pore // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0003746 // translation elongation factor activity // inferred from electronic annotation /// 0043022 // ribosome binding // inferred from electronic annotation","chr10:81272288-81276196 (+) // 73.68 // q22.3"]
["11756132_a_at",0.030769348,0.055091858,0.088775635,-0.03927803,-0.030769348,-0.056524277,0.16151318,0.005530925,1.0720727,0.1004028,1.0720727,"up","DHX16",8449.0,"0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003724 // RNA helicase activity // traceable author statement /// 0004386 // helicase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr6:30620899-30629760 (-) // 94.01 // p21.33"]
["11740943_at",0.18809748,0.08097458,0.0051300526,-0.041888714,-0.14294672,-0.005129814,0.42941988,0.08268931,1.1132075,0.15472248,1.1132075,"up","SHOX",6473.0,"0001501 // skeletal system development // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0000976 // transcription regulatory region sequence-specific DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chrX:585074-612318 (+) // 88.76 // p22.33 /// chrY:535074-562318 (+) // 88.76 // p11.32"]
["11727120_a_at",-0.00404644,-0.055273056,0.07292652,0.00404644,0.049863815,-0.058366776,0.9707517,0.90756786,1.0041823,0.0060212566,1.0041823,"up","MYCBP2",23077.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0008045 // motor axon guidance // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0021785 // branchiomotor neuron axon guidance // inferred from electronic annotation /// 0021952 // central nervous system projection neuron axonogenesis // inferred from electronic annotation /// 0032880 // regulation of protein localization // inferred from electronic annotation /// 0048667 // cell morphogenesis involved in neuron differentiation // inferred from electronic annotation /// 0051493 // regulation of cytoskeleton organization // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr13:77618791-77901177 (-) // 98.61 // q22.3"]
["11740187_at",-0.14511561,0.015072823,0.03227043,-0.015073061,0.023337364,-0.15754676,0.94687396,0.8382791,1.0119724,0.017169982,1.0119724,"up","ARL11",115761.0,"0007264 // small GTPase mediated signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation","chr13:50202434-50208008 (+) // 70.11 // q14.2"]
["11725458_a_at",-0.03996682,0.03996706,-0.070087194,0.17999673,-0.09284377,0.0919466,0.7344246,0.39300153,-1.059264,-0.08306212,1.059264,"down","KLHDC8A",55220.0,"","","","chr1:205305192-205326124 (-) // 99.64 // q32.1"]
["11720351_a_at",0.14087725,-0.0016479492,0.0016479492,-0.04895401,0.035643578,-0.07028961,0.6387481,0.25973263,1.0532339,0.07482581,1.0532339,"up","ETV5",2119.0,"0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0034599 // cellular response to oxidative stress // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0060762 // regulation of branching involved in mammary gland duct morphogenesis // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay","chr3:185764102-185826901 (-) // 92.57 // q27.2"]
["11761123_at",0.1627047,0.111831665,-0.046399117,-0.17927122,-0.0073900223,0.0073900223,0.5792407,0.1931794,1.0987041,0.1358029,1.0987041,"up","RNGTT",8732.0,"0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006370 // 7-methylguanosine mRNA capping // inferred from electronic annotation /// 0006370 // 7-methylguanosine mRNA capping // traceable author statement /// 0006396 // RNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004484 // mRNA guanylyltransferase activity // inferred from electronic annotation /// 0004484 // mRNA guanylyltransferase activity // traceable author statement /// 0004651 // polynucleotide 5'-phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0008138 // protein tyrosine/serine/threonine phosphatase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016779 // nucleotidyltransferase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation","chr6:89387712-89673280 (-) // 86.22 // q15"]
["11736083_x_at",0.093818665,0.07658911,0.10082865,-0.15036154,-0.07658863,-0.180552,0.11400244,0.0020399115,1.1697873,0.22624621,1.1697873,"up","GTSE1",51512.0,"0000085 // G2 phase of mitotic cell cycle // non-traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // non-traceable author statement /// 0007017 // microtubule-based process // non-traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005881 // cytoplasmic microtubule // non-traceable author statement","","chr22:46692637-46729535 (+) // 78.03 // q13.31"]
["11723107_a_at",-0.01351738,-0.025947094,0.03970194,-0.08382225,0.01351738,0.07165146,0.9981676,0.99441224,-1.0002563,-3.6971533E-4,1.0002563,"down","RBFA",79863.0,"0006364 // rRNA processing // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation","","chr18:77794357-77806472 (+) // 99.8 // q23"]
["11756323_x_at",0.06477928,0.11640406,0.010792255,-0.036783695,-0.08999729,-0.010792255,0.3506395,0.045829102,1.0791157,0.10984962,1.0791157,"up","F12",2161.0,"0002353 // plasma kallikrein-kinin cascade // inferred from direct assay /// 0002542 // Factor XII activation // inferred from direct assay /// 0006508 // proteolysis // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0007596 // blood coagulation // inferred from electronic annotation /// 0007597 // blood coagulation, intrinsic pathway // inferred by curator /// 0007597 // blood coagulation, intrinsic pathway // traceable author statement /// 0007599 // hemostasis // inferred from electronic annotation /// 0010756 // positive regulation of plasminogen activation // inferred from direct assay /// 0016485 // protein processing // inferred from direct assay /// 0016540 // protein autoprocessing // inferred from direct assay /// 0030193 // regulation of blood coagulation // inferred from electronic annotation /// 0030194 // positive regulation of blood coagulation // inferred from direct assay /// 0031638 // zymogen activation // inferred from direct assay /// 0042730 // fibrinolysis // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0051788 // response to misfolded protein // inferred from direct assay /// 0051919 // positive regulation of fibrinolysis // inferred from direct assay","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement","0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from direct assay /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0005488 // binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0051787 // misfolded protein binding // inferred by curator","chr5:176829158-176831473 (-) // 97.54 // q35.3"]
["11731541_at",0.08959055,-0.15687037,-0.17377615,0.060784817,-0.060784817,0.108819485,0.6738408,0.3038746,-1.0841956,-0.11662507,1.0841956,"down","SESTD1",91404.0,"0051925 // regulation of calcium ion transport via voltage-gated calcium channel activity // inferred from mutant phenotype","0034704 // calcium channel complex // inferred from physical interaction","0001786 // phosphatidylserine binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005545 // 1-phosphatidylinositol binding // inferred from direct assay /// 0005546 // phosphatidylinositol-4,5-bisphosphate binding // inferred from direct assay /// 0010314 // phosphatidylinositol-5-phosphate binding // inferred from direct assay /// 0031210 // phosphatidylcholine binding // inferred from direct assay /// 0032266 // phosphatidylinositol-3-phosphate binding // inferred from direct assay /// 0043325 // phosphatidylinositol-3,4-bisphosphate binding // inferred from direct assay /// 0070273 // phosphatidylinositol-4-phosphate binding // inferred from direct assay /// 0070300 // phosphatidic acid binding // inferred from direct assay /// 0080025 // phosphatidylinositol-3,5-bisphosphate binding // inferred from direct assay","chr2:179966420-180129517 (-) // 86.67 // q31.2"]
["11735218_at",-0.04614401,0.068534374,-0.3871205,0.04614401,-0.054178476,0.26934743,0.65427667,0.27940705,-1.1556312,-0.20868103,1.1556312,"down","COL10A1",1300.0,"0001501 // skeletal system development // traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005581 // collagen // inferred from electronic annotation /// 0005581 // collagen // traceable author statement /// 0005938 // cell cortex // inferred from electronic annotation","0046872 // metal ion binding // inferred from electronic annotation","chr6:116440084-116447296 (-) // 97.71 // q22.1"]
["11719597_a_at",-0.22451973,-0.03765917,0.14533854,-0.057457447,0.25698328,0.03765917,0.7706323,0.45167652,-1.0852357,-0.11800843,1.0852357,"down","EHD3",30845.0,"0006184 // GTP catabolic process // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0032456 // endocytic recycling // inferred from direct assay /// 0051260 // protein homooligomerization // inferred from physical interaction /// 0072661 // protein targeting to plasma membrane // inferred from genetic interaction /// 0086036 // regulation of cardiac muscle cell membrane potential // inferred from genetic interaction","0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0010008 // endosome membrane // traceable author statement /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030139 // endocytic vesicle // inferred from electronic annotation /// 0055038 // recycling endosome membrane // inferred from direct assay /// 0055038 // recycling endosome membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // traceable author statement /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation","chr2:31456879-31491259 (+) // 92.88 // p23.1"]
["11715360_x_at",-0.033581734,-0.056583405,-0.06941223,0.08654404,0.033581734,0.06619644,0.13611534,0.0034776307,-1.0832002,-0.11529993,1.0832002,"down","TIMP1",7076.0,"0001775 // cell activation // inferred from electronic annotation /// 0002576 // platelet degranulation // traceable author statement /// 0007568 // aging // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0010033 // response to organic substance // inferred from electronic annotation /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0034097 // response to cytokine stimulus // inferred from electronic annotation /// 0042060 // wound healing // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043086 // negative regulation of catalytic activity // inferred from electronic annotation /// 0043249 // erythrocyte maturation // inferred from electronic annotation /// 0043434 // response to peptide hormone stimulus // inferred from electronic annotation /// 0051045 // negative regulation of membrane protein ectodomain proteolysis // inferred from direct assay","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005581 // collagen // inferred from electronic annotation /// 0005604 // basement membrane // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from electronic annotation /// 0031093 // platelet alpha granule lumen // traceable author statement","0004857 // enzyme inhibitor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008191 // metalloendopeptidase inhibitor activity // inferred from direct assay /// 0008191 // metalloendopeptidase inhibitor activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chrX:47441642-47446188 (+) // 61.27 // p11.23"]
["11722881_at",-0.01941681,-0.05878973,0.025330067,0.04231167,-0.060908794,0.019417286,0.88156205,0.6748737,-1.0124838,-0.017898874,1.0124838,"down","KIAA1468",57614.0,"","","","chr18:59854502-59974553 (+) // 96.88 // q21.33"]
["11741915_a_at",-0.035312414,0.082793236,0.51693225,4.339218E-4,-0.0224092,-4.339218E-4,0.6772426,0.30915478,1.1452062,0.1956074,1.1452062,"up","ISM2",145501.0,"","0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay","","chr14:77940739-77965210 (-) // 93.46 // q24.3"]
["11741935_at",-0.049429655,0.34087682,-0.13430166,0.27528,0.049429655,-0.11883712,0.98004115,0.9344666,-1.0113219,-0.016242279,1.0113219,"down","LBX1",10660.0,"0001947 // heart looping // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007517 // muscle organ development // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0021920 // regulation of transcription from RNA polymerase II promoter involved in spinal cord association neuron specification // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0048663 // neuron fate commitment // inferred from electronic annotation /// 0048664 // neuron fate determination // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from electronic annotation","0000976 // transcription regulatory region sequence-specific DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr10:102986732-102988717 (-) // 89.29 // q24.31"]
["11741295_s_at",0.0146074295,-0.0146074295,0.12353563,-0.077679634,0.18585873,-0.18032312,0.85100234,0.606547,1.0462493,0.065226614,1.0462493,"up","DDI2 /// RSC1A1","6248 /// 84301","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0006810 // transport // traceable author statement /// 0050892 // intestinal absorption // inferred from electronic annotation /// 0051051 // negative regulation of transport // inferred from direct assay","0005624 // membrane fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005903 // brush border // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0004190 // aspartic-type endopeptidase activity // inferred from electronic annotation /// 0008200 // ion channel inhibitor activity // traceable author statement","chr1:15943952-15986748 (+) // 97.71 // p36.21"]
["11742947_at",0.09396124,0.047629833,-0.013034344,-0.045469284,-0.026014805,0.013034821,0.5355714,0.15336527,1.0441546,0.062335398,1.0441546,"up","GTF2H3",2967.0,"0000718 // nucleotide-excision repair, DNA damage removal // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006283 // transcription-coupled nucleotide-excision repair // traceable author statement /// 0006289 // nucleotide-excision repair // non-traceable author statement /// 0006289 // nucleotide-excision repair // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006360 // transcription from RNA polymerase I promoter // traceable author statement /// 0006361 // transcription initiation from RNA polymerase I promoter // traceable author statement /// 0006362 // transcription elongation from RNA polymerase I promoter // traceable author statement /// 0006363 // termination of RNA polymerase I transcription // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // inferred from direct assay /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006368 // transcription elongation from RNA polymerase II promoter // traceable author statement /// 0006370 // 7-methylguanosine mRNA capping // traceable author statement /// 0006412 // translation // traceable author statement /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0050434 // positive regulation of viral transcription // traceable author statement","0000439 // core TFIIH complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005675 // holo TFIIH complex // inferred from direct assay /// 0005675 // holo TFIIH complex // non-traceable author statement","0003684 // damaged DNA binding // non-traceable author statement /// 0003684 // damaged DNA binding // traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0004672 // protein kinase activity // inferred from direct assay /// 0008094 // DNA-dependent ATPase activity // inferred from direct assay /// 0008135 // translation factor activity, nucleic acid binding // traceable author statement /// 0008353 // RNA polymerase II carboxy-terminal domain kinase activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from physical interaction","chr12:124118320-124146187 (+) // 82.27 // q24.31"]
["11738280_x_at",0.01940298,0.026830673,-0.075005054,0.0869689,-0.08981514,-0.01940298,0.99227804,0.9732541,-1.0015081,-0.0021741134,1.0015081,"down","KLK12",43849.0,"0006508 // proteolysis // inferred from electronic annotation /// 0006508 // proteolysis // non-traceable author statement","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005625 // soluble fraction // inferred from direct assay","0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // non-traceable author statement /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from direct assay /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr19:51532347-51537898 (-) // 89.64 // q13.41"]
["11734779_at",0.054605246,-0.07202625,-0.019640684,0.019640684,-0.10141897,0.113250494,0.9209821,0.7674723,-1.0159607,-0.022844587,1.0159607,"down","ZNF639",51193.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0019059 // initiation of viral infection // inferred from direct assay /// 0030307 // positive regulation of cell growth // inferred from mutant phenotype /// 0043922 // negative regulation by host of viral transcription // inferred from mutant phenotype /// 0043923 // positive regulation by host of viral transcription // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043621 // protein self-association // inferred from physical interaction /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:179041550-179053323 (+) // 75.67 // q26.33"]
["11729088_at",-0.22664595,0.009112835,-0.03256011,0.12525582,-0.009112835,0.19164109,0.48816112,0.11793554,-1.137573,-0.18595913,1.137573,"down","C8orf34",116328.0,"0007165 // signal transduction // inferred from electronic annotation","","0008603 // cAMP-dependent protein kinase regulator activity // inferred from electronic annotation","chr8:69350147-69731256 (+) // 76.72 // q13.2"]
["11724110_a_at",-0.054577827,0.054578304,-0.034347057,0.06419277,-0.1555767,0.034347534,0.9768635,0.92605406,1.0052562,0.0075631994,1.0052562,"up","ARHGAP4",393.0,"0006915 // apoptotic process // traceable author statement /// 0007010 // cytoskeleton organization // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007266 // Rho protein signal transduction // traceable author statement /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0032321 // positive regulation of Rho GTPase activity // traceable author statement /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005925 // focal adhesion // inferred from direct assay","0005070 // SH3/SH2 adaptor activity // traceable author statement /// 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005100 // Rho GTPase activator activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chrX:153172831-153191697 (-) // 97.06 // q28"]
["11760312_at",-0.11643863,0.032913208,-0.042042494,-0.03291297,0.06612587,0.15773463,0.5919054,0.20583104,-1.075871,-0.105505094,1.075871,"down","NAMPT",10135.0,"0006766 // vitamin metabolic process // traceable author statement /// 0006767 // water-soluble vitamin metabolic process // traceable author statement /// 0006769 // nicotinamide metabolic process // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0008286 // insulin receptor signaling pathway // inferred from direct assay /// 0009435 // NAD biosynthetic process // inferred from electronic annotation /// 0019363 // pyridine nucleotide biosynthetic process // inferred from electronic annotation /// 0019674 // NAD metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051770 // positive regulation of nitric-oxide synthase biosynthetic process // inferred from direct assay /// 0060612 // adipose tissue development // inferred from direct assay","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0004514 // nicotinate-nucleotide diphosphorylase (carboxylating) activity // inferred from electronic annotation /// 0004516 // nicotinate phosphoribosyltransferase activity // inferred from electronic annotation /// 0005125 // cytokine activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0047280 // nicotinamide phosphoribosyltransferase activity // inferred from electronic annotation","chr7:105903603-105925397 (-) // 91.58 // q22.3"]
["11750175_s_at",0.078725815,-0.08864641,-0.012769222,0.012769222,-0.02983141,0.21281195,0.77635396,0.4596171,-1.0517656,-0.07281316,1.0517656,"down","LOC645954 /// SVIL","645954 /// 6840","0007010 // cytoskeleton organization // inferred from electronic annotation /// 0007519 // skeletal muscle tissue development // inferred from mutant phenotype","0002102 // podosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0015629 // actin cytoskeleton // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043034 // costamere // inferred from direct assay /// 0071437 // invadopodium // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0051015 // actin filament binding // inferred from direct assay","chr10:30984849-31005942 (+) // 94.02 // p11.23"]
["11738927_at",-0.1426506,0.015161991,0.046301126,-0.30170202,0.08343959,-0.015161991,0.89879674,0.7150883,1.0358001,0.050745603,1.0358001,"up","OR5P3",120066.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr11:7846583-7847519 (-) // 100.0 // p15.4"]
["11723102_at",-0.085837364,-0.024237633,0.024237633,-0.0373621,0.19162893,0.15411472,0.54933125,0.16620621,-1.0953609,-0.13140625,1.0953609,"down","GNB4",59345.0,"0006112 // energy reserve metabolic process // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0071377 // cellular response to glucagon stimulus // traceable author statement","0005886 // plasma membrane // traceable author statement","0004871 // signal transducer activity // inferred from electronic annotation","chr3:179113610-179169378 (-) // 82.48 // q26.33"]
["11724316_a_at",0.034466743,0.067396164,0.087863445,-0.034466743,-0.08943558,-0.07225895,0.15041919,0.0046196156,1.0932544,0.12862922,1.0932544,"up","LUZP1",7798.0,"","0005634 // nucleus // inferred from electronic annotation","","chr1:23410028-23495351 (-) // 91.43 // p36.12"]
["11751195_a_at",-0.0679028,0.12804914,0.023755789,-0.02375555,0.06720853,-0.0679028,0.860492,0.6292099,1.0253506,0.036117256,1.0253506,"up","KCNQ5",56479.0,"0006461 // protein complex assembly // non-traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0071805 // potassium ion transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0008076 // voltage-gated potassium channel complex // inferred from electronic annotation /// 0008076 // voltage-gated potassium channel complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005242 // inward rectifier potassium channel activity // traceable author statement /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005249 // voltage-gated potassium channel activity // inferred from electronic annotation /// 0005267 // potassium channel activity // inferred from electronic annotation","chr6:73331833-73834370 (+) // 94.76 // q13"]
["11748783_a_at",0.07622385,-0.0059576035,0.0059580803,0.011206627,-0.07061911,-0.014421463,0.6141043,0.22870862,1.0352789,0.0500195,1.0352789,"up","UHRF1",29128.0,"0006281 // DNA repair // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from expression pattern /// 0008283 // cell proliferation // traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0032270 // positive regulation of cellular protein metabolic process // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred by curator /// 2000373 // positive regulation of DNA topoisomerase (ATP-hydrolyzing) activity // inferred by curator","0000792 // heterochromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0000987 // core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008327 // methyl-CpG binding // inferred from direct assay /// 0016874 // ligase activity // inferred from electronic annotation /// 0035064 // methylated histone residue binding // inferred from direct assay /// 0042393 // histone binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:4909509-4961182 (+) // 96.39 // p13.3"]
["11751867_a_at",-0.0028734207,0.012527466,0.007918358,-0.011775017,0.0028734207,-0.027335167,0.52194273,0.14252381,1.0125102,0.017936414,1.0125102,"up","C8orf59",401466.0,"","","","chr8:86129391-86132569 (-) // 77.09 // q21.2"]
["11746024_at",-0.062791586,0.10553813,0.0376122,-0.0376122,-0.0376122,0.2881286,0.9043549,0.7294342,-1.0310982,-0.044181805,1.0310982,"down","LOC100293044",1.00293044E8,"","","","chr19:35167094-35168486 (-) // 47.96 // q13.11"]
["11756182_s_at",-0.022580147,0.022580147,0.06409645,-0.046035767,0.21172428,-0.040751457,0.943942,0.8302872,-1.0141565,-0.020280244,1.0141565,"down","PSAT1",29968.0,"0006564 // L-serine biosynthetic process // non-traceable author statement /// 0006564 // L-serine biosynthetic process // traceable author statement /// 0006564 // L-serine biosynthetic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008615 // pyridoxine biosynthetic process // non-traceable author statement /// 0008652 // cellular amino acid biosynthetic process // traceable author statement /// 0008652 // cellular amino acid biosynthetic process // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005829 // cytosol // traceable author statement","0003824 // catalytic activity // inferred from electronic annotation /// 0004648 // O-phospho-L-serine:2-oxoglutarate aminotransferase activity // non-traceable author statement /// 0004648 // O-phospho-L-serine:2-oxoglutarate aminotransferase activity // traceable author statement /// 0004648 // O-phospho-L-serine:2-oxoglutarate aminotransferase activity // inferred from electronic annotation /// 0008483 // transaminase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation","chr9:80944489-80945009 (+) // 67.84 // q21.2"]
["11753085_a_at",0.0073070526,-0.021050453,0.10746384,-0.0073070526,0.08890629,-0.11396122,0.8385317,0.58252215,1.0295597,0.042027533,1.0295597,"up","LOC100652805 /// LOC100653302 /// PGK1","100652805 /// 100653302 /// 5230","0005975 // carbohydrate metabolic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006094 // gluconeogenesis // traceable author statement /// 0006096 // glycolysis // inferred from electronic annotation /// 0006096 // glycolysis // traceable author statement /// 0016310 // phosphorylation // inferred from sequence or structural similarity /// 0016310 // phosphorylation // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0004618 // phosphoglycerate kinase activity // not recorded /// 0004618 // phosphoglycerate kinase activity // inferred from sequence or structural similarity /// 0004618 // phosphoglycerate kinase activity // inferred from electronic annotation /// 0004618 // phosphoglycerate kinase activity // traceable author statement /// 0005524 // ATP binding // inferred from sequence or structural similarity /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chrX:77359742-77381464 (+) // 100.0 // q21.1"]
["11720576_a_at",-0.026980877,-0.089886665,-0.056977272,0.026980877,0.13574982,0.117530346,0.24118593,0.016679646,-1.1106225,-0.15136856,1.1106225,"down","ARFGEF1",10565.0,"0006887 // exocytosis // traceable author statement /// 0016192 // vesicle-mediated transport // not recorded /// 0032012 // regulation of ARF protein signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005802 // trans-Golgi network // not recorded","0005085 // guanyl-nucleotide exchange factor activity // inferred from direct assay /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005086 // ARF guanyl-nucleotide exchange factor activity // not recorded /// 0005086 // ARF guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008060 // ARF GTPase activator activity // inferred from direct assay /// 0017022 // myosin binding // inferred from physical interaction","chr8:68109904-68256162 (-) // 98.53 // q13.2"]
["11716044_a_at",0.011496544,0.012598991,0.002333641,-0.002333641,-0.2118845,-0.07720566,0.5433703,0.15947326,1.0762036,0.10595102,1.0762036,"up","FAM168B",130074.0,"","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","","chr2:131805448-131851033 (-) // 98.73 // q21.1"]
["11738919_at",0.06239438,-0.17072272,0.017414808,-0.017414808,-0.042463064,0.07829285,0.88088346,0.67356735,-1.025582,-0.036442783,1.025582,"down","TAS2R50",259296.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050909 // sensory perception of taste // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation","chr12:11138511-11139511 (-) // 100.0 // p13.2"]
["11743097_a_at",-0.0011205673,-0.06335354,0.08073902,-0.054852962,0.0011205673,0.04357958,0.9578176,0.87012047,1.0061225,0.008805927,1.0061225,"up","ITPK1",3705.0,"0007165 // signal transduction // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008152 // metabolic process // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0032957 // inositol trisphosphate metabolic process // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0003824 // catalytic activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047325 // inositol tetrakisphosphate 1-kinase activity // inferred from electronic annotation /// 0052725 // inositol-1,3,4-trisphosphate 6-kinase activity // inferred from electronic annotation /// 0052726 // inositol-1,3,4-trisphosphate 5-kinase activity // inferred from electronic annotation","chr14:93406068-93582263 (-) // 94.85 // q32.12"]
["11728596_a_at",-0.051245213,-0.011815071,-0.11584735,0.03369069,0.011815071,0.09390998,0.3684316,0.052995067,-1.0763205,-0.10610778,1.0763205,"down","FAM180A",389558.0,"","0005576 // extracellular region // inferred from electronic annotation","","chr7:135414346-135433594 (-) // 83.34 // q33"]
["11750649_at",0.17424583,-0.019587517,-0.12515545,0.037308693,-0.33323145,0.019587517,0.8146955,0.5318363,1.0732201,0.101946026,1.0732201,"up","SMCR5",140771.0,"","","","chr17:17680119-17682843 (-) // 56.96 // p11.2"]
["11742459_a_at",0.109534025,-0.16604328,0.15195227,0.058838367,-0.058838367,-0.08700967,0.851199,0.60736734,1.0430567,0.06081762,1.0430567,"up","GPR111",222611.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007218 // neuropeptide signaling pathway // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement","chr6:47624325-47658337 (+) // 92.1 // p12.3"]
["11727993_at",-0.07680535,0.033616543,-0.21981096,0.13843584,0.10114789,-0.033616543,0.5417121,0.15764901,-1.1144426,-0.15632229,1.1144426,"down","STX11",8676.0,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006944 // cellular membrane fusion // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation","0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005484 // SNAP receptor activity // inferred from electronic annotation /// 0005484 // SNAP receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr6:144471653-144513075 (+) // 80.96 // q24.2"]
["11741336_at",-0.16543007,0.16357279,-0.016026974,0.016026974,0.14592743,-0.016672134,0.86461216,0.6388719,-1.0384191,-0.054388862,1.0384191,"down","CACNG7",59284.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006816 // calcium ion transport // non-traceable author statement /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0051925 // regulation of calcium ion transport via voltage-gated calcium channel activity // non-traceable author statement /// 0070588 // calcium ion transmembrane transport // inferred from electronic annotation /// 2000311 // regulation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor activity // inferred from direct assay /// 2000311 // regulation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor activity // inferred from electronic annotation","0005891 // voltage-gated calcium channel complex // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0032281 // alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective glutamate receptor complex // inferred from sequence or structural similarity /// 0032281 // alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective glutamate receptor complex // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005245 // voltage-gated calcium channel activity // non-traceable author statement /// 0005262 // calcium channel activity // inferred from electronic annotation","chr19:54416040-54446938 (+) // 97.8 // q13.42"]
["11738620_a_at",0.013288021,-0.013288021,-0.28037524,0.08391929,0.04557252,-0.14601612,0.7958352,0.496424,-1.062859,-0.0879503,1.062859,"down","NLGN4Y",22829.0,"0007155 // cell adhesion // inferred from electronic annotation /// 0007416 // synapse assembly // not recorded","0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // not recorded /// 0009986 // cell surface // not recorded /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0045202 // synapse // not recorded /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0004091 // carboxylesterase activity // not recorded /// 0004872 // receptor activity // not recorded /// 0005515 // protein binding // inferred from physical interaction /// 0042043 // neurexin family protein binding // not recorded","chrY:16635778-16955527 (+) // 99.62 // q11.221"]
["11732961_at",0.05210352,-0.059764624,0.059893847,-0.05210352,-0.2712412,0.2187841,0.9093495,0.7399695,1.0368911,0.052264385,1.0368911,"up","ZP2",7783.0,"0006828 // manganese ion transport // inferred from sequence or structural similarity /// 0006886 // intracellular protein transport // inferred from sequence or structural similarity /// 0007338 // single fertilization // inferred from electronic annotation /// 0007339 // binding of sperm to zona pellucida // inferred from sequence or structural similarity /// 0007339 // binding of sperm to zona pellucida // traceable author statement /// 0060046 // regulation of acrosome reaction // inferred from direct assay /// 0060468 // prevention of polyspermy // inferred from sequence or structural similarity","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005771 // multivesicular body // inferred from sequence or structural similarity /// 0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0005794 // Golgi apparatus // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030141 // secretory granule // inferred from sequence or structural similarity /// 0031012 // extracellular matrix // inferred from sequence or structural similarity","0004872 // receptor activity // inferred from electronic annotation /// 0015026 // coreceptor activity // traceable author statement /// 0032190 // acrosin binding // inferred from physical interaction","chr16:21208772-21225831 (-) // 97.56 // p12.2"]
["11752606_x_at",-0.016120434,-0.16710043,-0.012147427,0.042356014,0.012147427,0.072300434,0.4867868,0.11701333,-1.0772781,-0.10739078,1.0772781,"down","LOC100653301 /// NRBP2","100653301 /// 340371","0006468 // protein phosphorylation // non-traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0016242 // negative regulation of macroautophagy // inferred from mutant phenotype /// 0030182 // neuron differentiation // inferred from sequence or structural similarity /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from sequence or structural similarity /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation","0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // non-traceable author statement /// 0004672 // protein kinase activity // non-traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr8:144917699-144922385 (-) // 100.0 // q24.3"]
["11750071_x_at",0.14511871,-0.029144764,-0.27474546,0.060922623,0.029144764,-0.049943447,0.8597586,0.6270325,-1.0470269,-0.06629847,1.0470269,"down","ATG2A",23130.0,"","","0005515 // protein binding // inferred from physical interaction","chr11:64681119-64684681 (-) // 100.0 // q13.1"]
["11747604_a_at",-0.02132225,0.02132225,-0.02132225,0.2061944,0.17368603,-0.02949524,0.55949324,0.17433184,-1.0896784,-0.12390242,1.0896784,"down","KIAA1875",340390.0,"","","","chr8:145164487-145166823 (+) // 99.66 // q24.3"]
["11733382_a_at",0.1509018,0.017387867,-0.017387867,0.0889802,-0.10800266,-0.11809111,0.6860737,0.32035458,1.0688097,0.09600507,1.0688097,"up","AFAP1",60312.0,"0009966 // regulation of signal transduction // inferred from electronic annotation /// 0071260 // cellular response to mechanical stimulus // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005884 // actin filament // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0015629 // actin cytoskeleton // inferred from direct assay","0003779 // actin binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0042169 // SH2 domain binding // inferred from electronic annotation","chr4:7760439-7941653 (-) // 98.02 // p16.1"]
["11737841_a_at",-0.05002451,0.05002451,-0.09809399,0.12692118,0.07200384,-0.05662489,0.68180984,0.31450164,-1.0571142,-0.0801313,1.0571142,"down","FAM214B",80256.0,"","0005634 // nucleus // inferred from direct assay","","chr9:35104119-35115975 (-) // 96.23 // p13.3"]
["11722346_a_at",-0.014814854,-0.13197327,0.12035513,0.0148153305,0.0148153305,-0.03782749,0.9818825,0.9392836,-1.0042224,-0.0060788007,1.0042224,"down","ACSS2",55902.0,"0006069 // ethanol oxidation // traceable author statement /// 0006085 // acetyl-CoA biosynthetic process // inferred from electronic annotation /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008610 // lipid biosynthetic process // inferred from mutant phenotype /// 0044281 // small molecule metabolic process // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred by curator /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0003987 // acetate-CoA ligase activity // inferred from direct assay /// 0003987 // acetate-CoA ligase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016208 // AMP binding // inferred by curator /// 0016208 // AMP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation","chr20:33462744-33515762 (+) // 98.69 // q11.22"]
["11740080_at",0.022231102,0.045256615,0.045498848,-0.022231102,-0.037376404,-0.024062157,0.11231145,0.0019463226,1.0464853,0.06555205,1.0464853,"up","CXorf21",80231.0,"","","","chrX:30576940-30596033 (-) // 84.89 // p21.2"]
["11761171_x_at",0.117851734,-0.03416586,0.03416586,0.12558222,-0.043891907,-0.08416891,0.86288065,0.6336077,1.0281923,0.040110085,1.0281923,"up","SPHK2",56848.0,"0001568 // blood vessel development // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006665 // sphingolipid metabolic process // traceable author statement /// 0006669 // sphinganine-1-phosphate biosynthetic process // non-traceable author statement /// 0006670 // sphingosine metabolic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // non-traceable author statement /// 0007205 // protein kinase C-activating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0008283 // cell proliferation // non-traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030148 // sphingolipid biosynthetic process // traceable author statement /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0048511 // rhythmic process // inferred from electronic annotation","0005624 // membrane fraction // inferred from direct assay /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000977 // RNA polymerase II regulatory region sequence-specific DNA binding // inferred from direct assay /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0004143 // diacylglycerol kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008481 // sphinganine kinase activity // non-traceable author statement /// 0008481 // sphinganine kinase activity // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0017016 // Ras GTPase binding // non-traceable author statement /// 0017050 // D-erythro-sphingosine kinase activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation","chr19:49128190-49133973 (+) // 88.74 // q13.33"]
["11759507_at",-0.25574207,0.0052626133,-0.06463456,0.13235712,0.13702536,-0.0052628517,0.45989877,0.10088497,-1.1432,-0.19307786,1.1432,"down","ZNF292",23036.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:87865266-87973914 (+) // 98.71 // q14.3"]
["11722538_a_at",-0.0050678253,0.05884552,-0.04629755,0.0050678253,-0.098432064,0.09942818,0.9981676,0.9945371,1.0003272,4.7201515E-4,1.0003272,"up","TMCO6",55374.0,"0006606 // protein import into nucleus // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008565 // protein transporter activity // inferred from electronic annotation","chr5:140019011-140024989 (+) // 96.95 // q31.3"]
["11720667_a_at",-0.039076805,0.039076567,0.16543531,-0.15837216,0.08926177,-0.19569826,0.63290167,0.25287554,1.1045161,0.14341451,1.1045161,"up","KAT2B",8850.0,"0006338 // chromatin remodeling // non-traceable author statement /// 0006338 // chromatin remodeling // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006360 // transcription from RNA polymerase I promoter // traceable author statement /// 0006361 // transcription initiation from RNA polymerase I promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006473 // protein acetylation // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // traceable author statement /// 0007219 // Notch signaling pathway // traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0010467 // gene expression // traceable author statement /// 0016573 // histone acetylation // inferred from electronic annotation /// 0018076 // N-terminal peptidyl-lysine acetylation // inferred from direct assay /// 0018393 // internal peptidyl-lysine acetylation // inferred from electronic annotation /// 0018394 // peptidyl-lysine acetylation // inferred from direct assay /// 0032869 // cellular response to insulin stimulus // inferred from direct assay /// 0043966 // histone H3 acetylation // inferred from direct assay /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045736 // negative regulation of cyclin-dependent protein kinase activity // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0000123 // histone acetyltransferase complex // inferred from electronic annotation /// 0000125 // PCAF complex // non-traceable author statement /// 0000776 // kinetochore // inferred from electronic annotation /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005671 // Ada2/Gcn5/Ada3 transcription activator complex // inferred from direct assay /// 0016585 // chromatin remodeling complex // inferred from direct assay /// 0031672 // A band // inferred from electronic annotation /// 0031674 // I band // inferred from electronic annotation /// 0042641 // actomyosin // inferred from electronic annotation","0003712 // transcription cofactor activity // inferred from physical interaction /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from electronic annotation /// 0004402 // histone acetyltransferase activity // inferred from electronic annotation /// 0004468 // lysine N-acetyltransferase activity // inferred from direct assay /// 0004468 // lysine N-acetyltransferase activity // inferred from sequence or structural similarity /// 0004468 // lysine N-acetyltransferase activity // inferred from electronic annotation /// 0004861 // cyclin-dependent protein kinase inhibitor activity // inferred from sequence or structural similarity /// 0004861 // cyclin-dependent protein kinase inhibitor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008080 // N-acetyltransferase activity // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0016407 // acetyltransferase activity // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from sequence or structural similarity /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0042826 // histone deacetylase binding // inferred from physical interaction","chr3:20081523-20195896 (+) // 93.13 // p24.3"]
["11732524_a_at",-0.01876688,0.013455391,-0.10042286,0.12865734,-0.013455391,0.03472662,0.5737298,0.18807234,-1.0608503,-0.08522104,1.0608503,"down","CHKB-CPT1B /// CPT1B","1375 /// 386593","0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006635 // fatty acid beta-oxidation // inferred from electronic annotation /// 0006635 // fatty acid beta-oxidation // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006853 // carnitine shuttle // traceable author statement /// 0015909 // long-chain fatty acid transport // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046320 // regulation of fatty acid oxidation // traceable author statement","0005739 // mitochondrion // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // traceable author statement /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004095 // carnitine O-palmitoyltransferase activity // inferred from electronic annotation /// 0004095 // carnitine O-palmitoyltransferase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr22:51007289-51021394 (-) // 95.34 // q13.33"]
["11744502_a_at",0.01843834,0.07017231,-0.022188187,-0.05873871,0.018165588,-0.018165588,0.6680649,0.29616332,1.0293406,0.041720472,1.0293406,"up","PNISR",25957.0,"","0005634 // nucleus // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation","","chr6:99856014-99873184 (-) // 89.06 // q16.2"]
["11753579_a_at",-0.006512165,0.006512165,0.065686226,0.03169346,-0.22957706,-0.0493145,0.6422963,0.2640594,1.0749688,0.10429481,1.0749688,"up","IL6ST",3572.0,"0002675 // positive regulation of acute inflammatory response // inferred by curator /// 0002821 // positive regulation of adaptive immune response // inferred by curator /// 0005977 // glycogen metabolic process // inferred from electronic annotation /// 0006642 // triglyceride mobilization // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007259 // JAK-STAT cascade // inferred from electronic annotation /// 0007584 // response to nutrient // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from genetic interaction /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008593 // regulation of Notch signaling pathway // inferred from electronic annotation /// 0010575 // positive regulation vascular endothelial growth factor production // traceable author statement /// 0010613 // positive regulation of cardiac muscle hypertrophy // traceable author statement /// 0014911 // positive regulation of smooth muscle cell migration // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // inferred from direct assay /// 0019221 // cytokine-mediated signaling pathway // inferred from electronic annotation /// 0034097 // response to cytokine stimulus // inferred from direct assay /// 0038154 // interleukin-11-mediated signaling pathway // inferred from electronic annotation /// 0038165 // oncostatin-M-mediated signaling pathway // inferred from direct assay /// 0042102 // positive regulation of T cell proliferation // inferred from mutant phenotype /// 0042511 // positive regulation of tyrosine phosphorylation of Stat1 protein // inferred from mutant phenotype /// 0042517 // positive regulation of tyrosine phosphorylation of Stat3 protein // inferred from mutant phenotype /// 0045669 // positive regulation of osteoblast differentiation // inferred from mutant phenotype /// 0045768 // positive regulation of anti-apoptosis // traceable author statement /// 0048711 // positive regulation of astrocyte differentiation // inferred from electronic annotation /// 0048861 // leukemia inhibitory factor signaling pathway // inferred from genetic interaction /// 0051481 // reduction of cytosolic calcium ion concentration // inferred from electronic annotation /// 0070102 // interleukin-6-mediated signaling pathway // inferred from direct assay /// 0070102 // interleukin-6-mediated signaling pathway // inferred from genetic interaction /// 0070104 // negative regulation of interleukin-6-mediated signaling pathway // inferred from direct assay /// 0070106 // interleukin-27-mediated signaling pathway // inferred by curator /// 0070106 // interleukin-27-mediated signaling pathway // inferred from mutant phenotype /// 0070120 // ciliary neurotrophic factor-mediated signaling pathway // inferred from direct assay","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005896 // interleukin-6 receptor complex // inferred from direct assay /// 0005900 // oncostatin-M receptor complex // inferred from direct assay /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0044297 // cell body // inferred from electronic annotation /// 0070110 // ciliary neurotrophic factor receptor complex // inferred from direct assay","0004872 // receptor activity // inferred from electronic annotation /// 0004896 // cytokine receptor activity // inferred from electronic annotation /// 0004897 // ciliary neurotrophic factor receptor activity // inferred from direct assay /// 0004915 // interleukin-6 receptor activity // inferred from direct assay /// 0004915 // interleukin-6 receptor activity // inferred from genetic interaction /// 0004921 // interleukin-11 receptor activity // inferred from electronic annotation /// 0004923 // leukemia inhibitory factor receptor activity // inferred from genetic interaction /// 0004924 // oncostatin-M receptor activity // inferred from direct assay /// 0005127 // ciliary neurotrophic factor receptor binding // inferred from physical interaction /// 0005138 // interleukin-6 receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0019838 // growth factor binding // inferred from physical interaction /// 0019970 // interleukin-11 binding // inferred from electronic annotation /// 0019981 // interleukin-6 binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // traceable author statement /// 0045509 // interleukin-27 receptor activity // inferred by curator","chr5:55237592-55272106 (-) // 100.0 // q11.2"]
["11735884_at",-0.039910793,0.18789816,0.0037326813,-0.15365815,-0.0037326813,0.10184717,0.81637174,0.53467846,1.0490532,0.06908783,1.0490532,"up","NF2",4771.0,"0001707 // mesoderm formation // inferred from electronic annotation /// 0001953 // negative regulation of cell-matrix adhesion // traceable author statement /// 0006469 // negative regulation of protein kinase activity // inferred from electronic annotation /// 0007398 // ectoderm development // inferred from electronic annotation /// 0008156 // negative regulation of DNA replication // inferred from mutant phenotype /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0014010 // Schwann cell proliferation // inferred from mutant phenotype /// 0022408 // negative regulation of cell-cell adhesion // inferred from direct assay /// 0030036 // actin cytoskeleton organization // inferred from mutant phenotype /// 0030336 // negative regulation of cell migration // traceable author statement /// 0035330 // regulation of hippo signaling cascade // inferred from mutant phenotype /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042475 // odontogenesis of dentin-containing tooth // inferred from electronic annotation /// 0042518 // negative regulation of tyrosine phosphorylation of Stat3 protein // inferred from direct assay /// 0042524 // negative regulation of tyrosine phosphorylation of Stat5 protein // inferred from direct assay /// 0043409 // negative regulation of MAPK cascade // inferred from electronic annotation /// 0045216 // cell-cell junction organization // inferred from electronic annotation /// 0046426 // negative regulation of JAK-STAT cascade // inferred from direct assay /// 0051496 // positive regulation of stress fiber assembly // inferred from mutant phenotype /// 0070306 // lens fiber cell differentiation // inferred from electronic annotation","0001726 // ruffle // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0005856 // cytoskeleton // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005912 // adherens junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0019898 // extrinsic to membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030175 // filopodium // inferred from electronic annotation /// 0030864 // cortical actin cytoskeleton // inferred from electronic annotation /// 0031527 // filopodium membrane // inferred from electronic annotation /// 0032154 // cleavage furrow // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008092 // cytoskeletal protein binding // inferred from electronic annotation","chr22:29999544-30079903 (+) // 98.37 // q12.2"]
["11755015_s_at",-0.029989243,-0.020483017,-0.032120705,0.031864166,0.102163315,0.02048397,0.32567596,0.037496757,-1.0563111,-0.079034835,1.0563111,"down","CPS1",1373.0,"0000050 // urea cycle // non-traceable author statement /// 0000050 // urea cycle // traceable author statement /// 0000050 // urea cycle // inferred from electronic annotation /// 0001101 // response to acid // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0005980 // glycogen catabolic process // inferred from mutant phenotype /// 0006543 // glutamine catabolic process // inferred from electronic annotation /// 0006807 // nitrogen compound metabolic process // inferred from electronic annotation /// 0007494 // midgut development // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009636 // response to toxin // inferred from electronic annotation /// 0010043 // response to zinc ion // inferred from electronic annotation /// 0014075 // response to amine stimulus // inferred from electronic annotation /// 0019240 // citrulline biosynthetic process // non-traceable author statement /// 0019433 // triglyceride catabolic process // inferred from mutant phenotype /// 0032094 // response to food // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from direct assay /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0033762 // response to glucagon stimulus // inferred from electronic annotation /// 0034201 // response to oleic acid // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042493 // response to drug // inferred from electronic annotation /// 0042594 // response to starvation // inferred from electronic annotation /// 0043200 // response to amino acid stimulus // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0044344 // cellular response to fibroblast growth factor stimulus // inferred from electronic annotation /// 0045909 // positive regulation of vasodilation // inferred from mutant phenotype /// 0046209 // nitric oxide metabolic process // inferred from mutant phenotype /// 0048545 // response to steroid hormone stimulus // inferred from electronic annotation /// 0050667 // homocysteine metabolic process // inferred from direct assay /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation /// 0051591 // response to cAMP // inferred from electronic annotation /// 0055081 // anion homeostasis // inferred from electronic annotation /// 0060416 // response to growth hormone stimulus // inferred from electronic annotation /// 0070365 // hepatocyte differentiation // inferred from electronic annotation /// 0070409 // carbamoyl phosphate biosynthetic process // inferred from electronic annotation /// 0070409 // carbamoyl phosphate biosynthetic process // inferred from mutant phenotype /// 0071320 // cellular response to cAMP // inferred from electronic annotation /// 0071377 // cellular response to glucagon stimulus // inferred from electronic annotation /// 0071400 // cellular response to oleic acid // inferred from electronic annotation /// 0071548 // response to dexamethasone stimulus // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement /// 0042645 // mitochondrial nucleoid // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004087 // carbamoyl-phosphate synthase (ammonia) activity // inferred from mutant phenotype /// 0004087 // carbamoyl-phosphate synthase (ammonia) activity // inferred from electronic annotation /// 0004175 // endopeptidase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0016595 // glutamate binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0032403 // protein complex binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0072341 // modified amino acid binding // inferred from direct assay","chr2:211536338-211543829 (+) // 72.31 // q34"]
["11722089_a_at",-0.05127144,0.07165241,0.04765606,0.0032663345,-0.1287756,-0.0032663345,0.68201375,0.31466937,1.0465231,0.06560415,1.0465231,"up","EML3",256364.0,"","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation","","chr11:62369690-62380237 (-) // 94.76 // q12.3"]
["11742965_a_at",0.032535076,0.100400925,-0.007277012,-0.040254116,0.007277012,-0.08614826,0.4919822,0.12016935,1.0581871,0.08159477,1.0581871,"up","MTERFD2",130916.0,"0006390 // transcription from mitochondrial promoter // inferred from electronic annotation /// 0006626 // protein targeting to mitochondrion // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0042255 // ribosome assembly // inferred from electronic annotation /// 0043010 // camera-type eye development // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005762 // mitochondrial large ribosomal subunit // inferred from direct assay","0019843 // rRNA binding // inferred from direct assay","chr2:242026510-242041714 (-) // 87.6 // q37.3"]
["11761833_x_at",0.07456541,-0.008192062,-0.060387135,0.03273821,0.008192062,-0.029096127,0.9897327,0.96617687,-1.0013521,-0.0019493097,1.0013521,"down","PI16",221476.0,"0006508 // proteolysis // inferred from electronic annotation /// 0010466 // negative regulation of peptidase activity // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008233 // peptidase activity // inferred from electronic annotation /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation","chr6:36922513-36932139 (+) // 97.87 // p21.2"]
["11747420_s_at",-0.11137962,0.054609776,-0.21914387,0.058668613,-0.054610252,0.09358883,0.6274984,0.24442089,-1.0901452,-0.12452035,1.0901452,"down","ARF3",377.0,"0006184 // GTP catabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0005525 // GTP binding // inferred from electronic annotation /// 0005525 // GTP binding // traceable author statement","chr12:49331805-49351270 (-) // 92.76 // q13.12"]
["11718131_a_at",-0.037631273,0.020028353,0.10261011,-0.009091139,0.009091139,-0.018578768,0.7709803,0.45217234,1.0242221,0.034528643,1.0242221,"up","OLFM4",10562.0,"0007155 // cell adhesion // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation","","chr13:53602875-53626192 (+) // 97.25 // q14.3"]
["11757473_x_at",-0.002746582,0.010607719,-0.055509567,0.020839691,-0.021884918,0.002746582,0.8117594,0.5254949,-1.0114675,-0.016449902,1.0114675,"down","NSUN5",55695.0,"0032259 // methylation // inferred from electronic annotation","","0008168 // methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr7:72717225-72717740 (-) // 87.23 // q11.23"]
["11745981_a_at",-0.029421806,0.029422045,-0.15061522,0.047761917,-0.16437578,0.14936209,0.84613943,0.596897,-1.0432762,-0.06112114,1.0432762,"down","GRAMD1C",54762.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr3:113616317-113666018 (+) // 99.86 // q13.31"]
["11734847_x_at",-0.040237665,-0.01813054,0.08706117,0.01813054,-0.10958505,0.35063386,0.8556831,0.6188173,-1.0546972,-0.07682881,1.0546972,"down","ERBB2IP",55914.0,"0007049 // cell cycle // non-traceable author statement /// 0007155 // cell adhesion // non-traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007229 // integrin-mediated signaling pathway // non-traceable author statement /// 0016049 // cell growth // non-traceable author statement /// 0045104 // intermediate filament cytoskeleton organization // non-traceable author statement /// 0045175 // basal protein localization // non-traceable author statement /// 0045197 // establishment or maintenance of epithelial cell apical/basal polarity // non-traceable author statement","0005604 // basement membrane // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0009925 // basal plasma membrane // non-traceable author statement /// 0030054 // cell junction // inferred from electronic annotation /// 0030056 // hemidesmosome // inferred from direct assay /// 0030056 // hemidesmosome // inferred from electronic annotation","0005176 // ErbB-2 class receptor binding // traceable author statement /// 0005178 // integrin binding // inferred from physical interaction /// 0005200 // structural constituent of cytoskeleton // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr5:65222195-65376850 (+) // 98.8 // q12.3"]
["11729264_x_at",-0.011288643,0.028513908,0.011288166,-0.025212765,0.08618212,-0.071317196,0.93365335,0.8012127,1.0090193,0.012953706,1.0090193,"up","ADAT1",23536.0,"0006396 // RNA processing // inferred from electronic annotation /// 0008033 // tRNA processing // inferred from mutant phenotype /// 0008033 // tRNA processing // inferred from electronic annotation","","0003723 // RNA binding // inferred from mutant phenotype /// 0003723 // RNA binding // inferred from electronic annotation /// 0004000 // adenosine deaminase activity // inferred from electronic annotation /// 0008251 // tRNA-specific adenosine deaminase activity // inferred from mutant phenotype /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:74413492-75657203 (-) // 78.02 // q23.1"]
["11727545_at",0.09081459,0.022591114,0.3083954,-0.040790558,-0.022591114,-0.031260014,0.48676106,0.11693169,1.1267345,0.1721476,1.1267345,"up","PANK3",79646.0,"0015937 // coenzyme A biosynthetic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004594 // pantothenate kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr5:167982377-168006610 (-) // 88.16 // q34"]
["11715883_x_at",0.007294655,0.006668091,0.0047693253,-0.0047693253,-0.03085804,-0.07158756,0.45370522,0.09714316,1.0295274,0.041982263,1.0295274,"up","DAP3",7818.0,"0006915 // apoptotic process // inferred from electronic annotation /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0008637 // apoptotic mitochondrial changes // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // inferred from electronic annotation /// 0005761 // mitochondrial ribosome // inferred from electronic annotation /// 0005840 // ribosome // inferred from electronic annotation /// 0015935 // small ribosomal subunit // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr1:155657660-155708797 (+) // 85.08 // q22"]
["11762182_a_at",0.082615614,-0.17802191,0.17460299,0.060540438,-0.11815691,-0.0605402,0.8511714,0.60692596,1.0466539,0.06578442,1.0466539,"up","PPP5C",5536.0,"0006351 // transcription, DNA-dependent // traceable author statement /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0006470 // protein dephosphorylation // traceable author statement /// 0007067 // mitosis // traceable author statement /// 0007165 // signal transduction // inferred from mutant phenotype /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from mutant phenotype /// 0043278 // response to morphine // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004722 // protein serine/threonine phosphatase activity // traceable author statement /// 0004871 // signal transducer activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:46886412-46891192 (+) // 84.05 // q13.32"]
["11720131_a_at",-0.04746914,0.019279003,0.09518385,-0.01927948,-0.063438416,0.078359604,0.8947232,0.70637757,1.0166224,0.023783958,1.0166224,"up","SPIRE1",56907.0,"0006810 // transport // inferred from electronic annotation /// 0048193 // Golgi vesicle transport // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation","chr18:12443294-12658133 (-) // 69.78 // p11.21"]
["11744020_at",-0.056466103,0.0034666061,-0.06328392,0.022585869,0.0073490143,-0.0034666061,0.4617573,0.10205836,-1.0335326,-0.047583923,1.0335326,"down","NUP210",23225.0,"0005975 // carbohydrate metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0008645 // hexose transport // traceable author statement /// 0010827 // regulation of glucose transport // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0015758 // glucose transport // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051028 // mRNA transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // traceable author statement /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005643 // nuclear pore // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation","0046983 // protein dimerization activity // inferred from electronic annotation","chr3:13357734-13461809 (-) // 97.59 // p25.1"]
["11743730_at",0.09549546,0.08552551,-0.18374681,-0.026049614,-0.16421676,0.026049614,0.8669768,0.6432948,1.0380172,0.053830285,1.0380172,"up","TNFSF10",8743.0,"0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // traceable author statement /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // traceable author statement /// 0006955 // immune response // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0008633 // activation of pro-apoptotic gene products // traceable author statement /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from expression pattern /// 0043280 // positive regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0090200 // positive regulation of release of cytochrome c from mitochondria // inferred from direct assay /// 2001238 // positive regulation of extrinsic apoptotic signaling pathway // inferred from direct assay","0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from electronic annotation /// 0005625 // soluble fraction // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005102 // receptor binding // traceable author statement /// 0005125 // cytokine activity // inferred from electronic annotation /// 0005164 // tumor necrosis factor receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:172223302-172241297 (-) // 83.68 // q26.31"]
["11720275_a_at",-0.08856487,-0.019726753,0.028726578,-0.06695461,0.071762085,0.019726753,0.8228918,0.54742837,-1.0243436,-0.034699738,1.0243436,"down","CFLAR",8837.0,"0006508 // proteolysis // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from mutant phenotype /// 0006916 // anti-apoptosis // traceable author statement /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from expression pattern /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 2001237 // negative regulation of extrinsic apoptotic signaling pathway // inferred from mutant phenotype","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0031264 // death-inducing signaling complex // inferred from direct assay","0004197 // cysteine-type endopeptidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation","chr2:201980681-202005162 (+) // 72.72 // q33.1"]
["11729624_at",0.024551392,0.024434566,-0.002313614,0.002313137,-0.04027462,-0.12485838,0.52276963,0.14332902,1.0495936,0.06983078,1.0495936,"up","DCAF7",10238.0,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred by curator /// 0016567 // protein ubiquitination // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0080008 // CUL4-RING ubiquitin ligase complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr17:61627800-61671630 (+) // 94.17 // q23.3"]
["11732893_at",0.10047102,-0.043936253,-0.08142328,0.25412512,0.043936253,-0.09707022,0.8252313,0.5520916,-1.0535752,-0.075293235,1.0535752,"down","CDKL3",51265.0,"0006464 // cellular protein modification process // traceable author statement /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004693 // cyclin-dependent protein kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr5:133633885-133702783 (-) // 97.76 // q31.1"]
["11723442_at",-0.15722156,0.113236666,-0.0765357,0.07911873,-0.057765722,0.057765722,0.8002829,0.5040008,-1.0472069,-0.06654648,1.0472069,"down","EPHA4",2043.0,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007411 // axon guidance // inferred from electronic annotation /// 0007628 // adult walking behavior // inferred from electronic annotation /// 0008045 // motor axon guidance // inferred from sequence or structural similarity /// 0008045 // motor axon guidance // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0021957 // corticospinal tract morphogenesis // inferred from sequence or structural similarity /// 0021957 // corticospinal tract morphogenesis // inferred from electronic annotation /// 0032314 // regulation of Rac GTPase activity // inferred from sequence or structural similarity /// 0032314 // regulation of Rac GTPase activity // inferred from electronic annotation /// 0032317 // regulation of Rap GTPase activity // inferred from sequence or structural similarity /// 0032317 // regulation of Rap GTPase activity // inferred from electronic annotation /// 0043507 // positive regulation of JUN kinase activity // inferred from electronic annotation /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0048013 // ephrin receptor signaling pathway // inferred from electronic annotation /// 0048681 // negative regulation of axon regeneration // inferred from sequence or structural similarity /// 0048681 // negative regulation of axon regeneration // inferred from electronic annotation /// 0048710 // regulation of astrocyte differentiation // inferred from sequence or structural similarity /// 0048710 // regulation of astrocyte differentiation // inferred from electronic annotation /// 0050770 // regulation of axonogenesis // inferred from sequence or structural similarity /// 0050770 // regulation of axonogenesis // inferred from electronic annotation /// 0061001 // regulation of dendritic spine morphogenesis // inferred from sequence or structural similarity /// 0061001 // regulation of dendritic spine morphogenesis // inferred from electronic annotation /// 0097155 // fasciculation of sensory neuron axon // inferred from sequence or structural similarity /// 0097155 // fasciculation of sensory neuron axon // inferred from electronic annotation /// 0097156 // fasciculation of motor neuron axon // inferred from sequence or structural similarity /// 0097156 // fasciculation of motor neuron axon // inferred from electronic annotation /// 2001108 // positive regulation of Rho guanyl-nucleotide exchange factor activity // inferred from direct assay","0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from sequence or structural similarity /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030424 // axon // inferred from sequence or structural similarity /// 0030424 // axon // inferred from electronic annotation /// 0030425 // dendrite // inferred from sequence or structural similarity /// 0030425 // dendrite // inferred from electronic annotation /// 0031594 // neuromuscular junction // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from sequence or structural similarity /// 0031901 // early endosome membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005003 // ephrin receptor activity // inferred from electronic annotation /// 0005004 // GPI-linked ephrin receptor activity // inferred from sequence or structural similarity /// 0005004 // GPI-linked ephrin receptor activity // inferred from electronic annotation /// 0005005 // transmembrane-ephrin receptor activity // inferred from sequence or structural similarity /// 0005005 // transmembrane-ephrin receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0042731 // PH domain binding // inferred from physical interaction /// 0046875 // ephrin receptor binding // inferred from electronic annotation /// 0097161 // DH domain binding // inferred from direct assay","chr2:222282754-222438922 (-) // 98.45 // q36.1"]
["11735150_x_at",-0.042630672,-0.059467316,0.12909126,0.042630672,-0.12329483,0.1006403,0.9940114,0.9805486,1.0016227,0.0023391305,1.0016227,"up","NXPE3",91775.0,"","0005576 // extracellular region // inferred from electronic annotation","","chr3:101498285-101547507 (+) // 80.86 // q12.3"]
["11722569_at",-0.03779602,0.010194778,-0.018779278,0.11687899,0.14919376,-0.010194778,0.48720914,0.11733657,-1.0723329,-0.10075279,1.0723329,"down","VEZT",55591.0,"0016337 // cell-cell adhesion // inferred from electronic annotation /// 0043009 // chordate embryonic development // inferred from electronic annotation","0001669 // acrosomal vesicle // inferred from electronic annotation /// 0002142 // stereocilia ankle link complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005912 // adherens junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","","chr12:95611521-95696780 (+) // 95.01 // q22"]
["11720919_s_at",0.014616966,0.001657486,0.084257126,-0.035560608,-0.001657486,-0.027852058,0.48594528,0.116343044,1.0390035,0.055200502,1.0390035,"up","EIF1",10209.0,"0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // non-traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006413 // translational initiation // inferred from electronic annotation /// 0006446 // regulation of translational initiation // traceable author statement /// 0006950 // response to stress // non-traceable author statement","0005737 // cytoplasm // traceable author statement","0003743 // translation initiation factor activity // non-traceable author statement /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0003743 // translation initiation factor activity // traceable author statement /// 0008135 // translation factor activity, nucleic acid binding // traceable author statement","chr17:39845142-39847898 (+) // 88.19 // q21.2"]
["11738688_s_at",0.07578182,-0.0042045116,0.08853626,-0.2178948,0.0042045116,-0.102629185,0.43653503,0.08705388,1.1163667,0.15881105,1.1163667,"up","OR5T1",390155.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr11:56043028-56044146 (+) // 100.0 // q12.1"]
["11720317_a_at",0.003276825,-0.037402153,-0.06889343,2.565384E-4,0.029514313,-2.565384E-4,0.5017887,0.12827383,-1.0310953,-0.044177633,1.0310953,"down","DAD1",1603.0,"0001824 // blastocyst development // inferred from electronic annotation /// 0006486 // protein glycosylation // inferred from sequence or structural similarity /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from electronic annotation /// 0006916 // anti-apoptosis // traceable author statement /// 0007584 // response to nutrient // inferred from electronic annotation /// 0018279 // protein N-linked glycosylation via asparagine // inferred by curator /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0042493 // response to drug // inferred from electronic annotation /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005789 // endoplasmic reticulum membrane // traceable author statement /// 0008250 // oligosaccharyltransferase complex // inferred from sequence or structural similarity /// 0008250 // oligosaccharyltransferase complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004576 // oligosaccharyl transferase activity // inferred from sequence or structural similarity /// 0004579 // dolichyl-diphosphooligosaccharide-protein glycotransferase activity // inferred by curator /// 0004579 // dolichyl-diphosphooligosaccharide-protein glycotransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr14:23033804-23058145 (-) // 70.87 // q11.2"]
["11727905_a_at",-0.040922165,-0.031406403,-0.061406136,0.031406403,0.035259247,0.086699486,0.18465985,0.008591759,-1.0685837,-0.09569995,1.0685837,"down","IL13RA1",3597.0,"0007166 // cell surface receptor signaling pathway // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005898 // interleukin-13 receptor complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004896 // cytokine receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chrX:117861257-117928929 (+) // 91.26 // q24"]
["11728084_a_at",0.4756236,0.018505812,-0.01274085,-0.054662943,-0.08599186,0.01274085,0.64974135,0.2744196,1.15117,0.20310092,1.15117,"up","DGKE",8526.0,"0007205 // protein kinase C-activating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008654 // phospholipid biosynthetic process // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0035556 // intracellular signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004143 // diacylglycerol kinase activity // inferred from electronic annotation /// 0004143 // diacylglycerol kinase activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0005524 // ATP binding // traceable author statement /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:54911459-54946036 (+) // 85.45 // q22"]
["11736876_a_at",0.17692351,0.014346361,-0.14058566,-0.0816555,-0.014346123,0.027479887,0.89323086,0.7031182,1.0279253,0.039735362,1.0279253,"up","DTWD2",285605.0,"","","","chr5:118172445-118324240 (-) // 78.79 // q23.1"]
["11718379_x_at",-0.010148048,-0.10607624,0.03687477,-0.07403946,0.010148048,0.025171757,0.93613476,0.80801284,-1.0094317,-0.013543326,1.0094317,"down","PRKAG2",51422.0,"0005977 // glycogen metabolic process // inferred from mutant phenotype /// 0006110 // regulation of glycolysis // inferred from mutant phenotype /// 0006112 // energy reserve metabolic process // traceable author statement /// 0006469 // negative regulation of protein kinase activity // inferred from direct assay /// 0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0006754 // ATP biosynthetic process // traceable author statement /// 0006853 // carnitine shuttle // traceable author statement /// 0007050 // cell cycle arrest // traceable author statement /// 0007243 // intracellular protein kinase cascade // inferred from mutant phenotype /// 0008152 // metabolic process // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0010800 // positive regulation of peptidyl-threonine phosphorylation // inferred from mutant phenotype /// 0016126 // sterol biosynthetic process // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0019217 // regulation of fatty acid metabolic process // inferred from mutant phenotype /// 0042304 // regulation of fatty acid biosynthetic process // traceable author statement /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045860 // positive regulation of protein kinase activity // inferred from mutant phenotype /// 0046320 // regulation of fatty acid oxidation // traceable author statement /// 0046324 // regulation of glucose import // traceable author statement /// 0050790 // regulation of catalytic activity // inferred from electronic annotation","0005654 // nucleoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0031588 // AMP-activated protein kinase complex // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004679 // AMP-activated protein kinase activity // inferred from electronic annotation /// 0004862 // cAMP-dependent protein kinase inhibitor activity // inferred from direct assay /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0008603 // cAMP-dependent protein kinase regulator activity // inferred from mutant phenotype /// 0008607 // phosphorylase kinase regulator activity // inferred from mutant phenotype /// 0016208 // AMP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from direct assay /// 0030295 // protein kinase activator activity // inferred from mutant phenotype /// 0043531 // ADP binding // inferred from direct assay","chr7:151253246-151574485 (-) // 93.81 // q36.1"]
["11754622_x_at",0.03690195,0.06519461,-0.13206291,0.03553152,-0.06762409,-0.03553152,0.9555114,0.86392903,1.0087388,0.012552593,1.0087388,"up","MEIS3",56917.0,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr19:47906381-47918195 (-) // 100.0 // q13.32"]
["11727818_a_at",0.06182003,0.025675774,0.13408852,-0.025675774,-0.06781292,-0.045734406,0.27748367,0.024328973,1.0869377,0.1202692,1.0869377,"up","DDX46",9879.0,"0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0015030 // Cajal body // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr5:134094423-134167068 (+) // 88.58 // q31.1"]
["11722317_a_at",-0.013971329,0.078439,-0.013971329,-0.02297926,0.013971329,0.1776011,0.8466804,0.59834146,-1.0276618,-0.039365556,1.0276618,"down","PTPN13",5783.0,"0006470 // protein dephosphorylation // traceable author statement /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from direct assay /// 0035335 // peptidyl-tyrosine dephosphorylation // traceable author statement /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0030027 // lamellipodium // inferred from direct assay /// 0030027 // lamellipodium // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0044297 // cell body // inferred from electronic annotation","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from direct assay /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation","chr4:87515459-87736314 (+) // 98.94 // q21.3"]
["11729748_a_at",-0.15064669,0.1480751,0.19549656,-0.00694561,0.00694561,-0.04318714,0.80385077,0.51157135,1.0560689,0.078703955,1.0560689,"up","IL10RA",3587.0,"0007165 // signal transduction // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // traceable author statement /// 0004872 // receptor activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0004920 // interleukin-10 receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr11:117857062-117872198 (+) // 87.77 // q23.3"]
["11748399_s_at",0.12021446,0.07027531,0.15845251,-0.15115547,-0.1640563,-0.07027578,0.13321671,0.0032564194,1.1849366,0.24480993,1.1849366,"up","VCL",7414.0,"0002009 // morphogenesis of an epithelium // inferred from mutant phenotype /// 0002576 // platelet degranulation // traceable author statement /// 0006928 // cellular component movement // traceable author statement /// 0006936 // muscle contraction // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007160 // cell-matrix adhesion // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0030032 // lamellipodium assembly // inferred from electronic annotation /// 0030032 // lamellipodium assembly // inferred from sequence or structural similarity /// 0030168 // platelet activation // traceable author statement /// 0030334 // regulation of cell migration // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // traceable author statement /// 0034333 // adherens junction assembly // inferred from mutant phenotype /// 0034394 // protein localization at cell surface // inferred from mutant phenotype /// 0043297 // apical junction assembly // inferred from mutant phenotype /// 0090136 // epithelial cell-cell adhesion // inferred from mutant phenotype","0001725 // stress fiber // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005884 // actin filament // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from sequence or structural similarity /// 0005911 // cell-cell junction // inferred from electronic annotation /// 0005912 // adherens junction // inferred from sequence or structural similarity /// 0005912 // adherens junction // inferred from electronic annotation /// 0005913 // cell-cell adherens junction // inferred from direct assay /// 0005916 // fascia adherens // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0005925 // focal adhesion // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from sequence or structural similarity /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030055 // cell-substrate junction // non-traceable author statement /// 0043034 // costamere // inferred from direct assay /// 0043034 // costamere // inferred from electronic annotation /// 0043034 // costamere // inferred from sequence or structural similarity /// 0043234 // protein complex // inferred from direct assay","0002162 // dystroglycan binding // inferred from physical interaction /// 0003779 // actin binding // inferred from direct assay /// 0005198 // structural molecule activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008013 // beta-catenin binding // inferred from sequence or structural similarity /// 0017048 // Rho GTPase binding // inferred from electronic annotation /// 0045294 // alpha-catenin binding // inferred from physical interaction /// 0045296 // cadherin binding // inferred from sequence or structural similarity","chr10:75757873-75878237 (+) // 99.78 // q22.2"]
["11721706_at",0.03681469,0.13117361,0.06543064,-0.036814213,-0.075704575,-0.11307955,0.21701412,0.012626755,1.1118836,0.15300581,1.1118836,"up","GPAM",57678.0,"0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006637 // acyl-CoA metabolic process // inferred from electronic annotation /// 0006641 // triglyceride metabolic process // inferred from electronic annotation /// 0006650 // glycerophospholipid metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008654 // phospholipid biosynthetic process // inferred from electronic annotation /// 0009749 // response to glucose stimulus // inferred from electronic annotation /// 0009750 // response to fructose stimulus // inferred from electronic annotation /// 0010867 // positive regulation of triglyceride biosynthetic process // inferred from electronic annotation /// 0014823 // response to activity // inferred from electronic annotation /// 0016024 // CDP-diacylglycerol biosynthetic process // inferred from electronic annotation /// 0019432 // triglyceride biosynthetic process // inferred from direct assay /// 0019432 // triglyceride biosynthetic process // traceable author statement /// 0031667 // response to nutrient levels // inferred from electronic annotation /// 0032869 // cellular response to insulin stimulus // inferred from electronic annotation /// 0040018 // positive regulation of multicellular organism growth // inferred from electronic annotation /// 0042104 // positive regulation of activated T cell proliferation // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044255 // cellular lipid metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046686 // response to cadmium ion // inferred from electronic annotation /// 0050707 // regulation of cytokine secretion // inferred from electronic annotation /// 0051607 // defense response to virus // inferred from electronic annotation /// 0055089 // fatty acid homeostasis // inferred from electronic annotation /// 0055091 // phospholipid homeostasis // inferred from electronic annotation /// 0070236 // negative regulation of activation-induced cell death of T cells // inferred from electronic annotation /// 0070970 // interleukin-2 secretion // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // traceable author statement /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation","0004366 // glycerol-3-phosphate O-acyltransferase activity // inferred from electronic annotation /// 0004366 // glycerol-3-phosphate O-acyltransferase activity // inferred from mutant phenotype /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation","chr10:113909623-113975153 (-) // 91.52 // q25.2"]
["11754764_a_at",0.18540144,-0.07361221,-0.13746786,0.073611975,0.1910851,-0.15414524,0.9197145,0.7642968,-1.0319766,-0.04541023,1.0319766,"down",-0.13746786,"RAB7B",338382.0,"0006810 // transport // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0032755 // positive regulation of interleukin-6 production // inferred from mutant phenotype /// 0034144 // negative regulation of toll-like receptor 4 signaling pathway // inferred from sequence or structural similarity /// 0034164 // negative regulation of toll-like receptor 9 signaling pathway // inferred from sequence or structural similarity /// 0034499 // late endosome to Golgi transport // inferred from mutant phenotype /// 0045654 // positive regulation of megakaryocyte differentiation // inferred from mutant phenotype /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from mutant phenotype","0005764 // lysosome // inferred from direct assay /// 0005764 // lysosome // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from direct assay /// 0005770 // late endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation"]
["11716912_x_at",-0.004433632,0.019205093,0.067287445,0.004433632,-0.013750076,-0.025157928,0.547031,0.1635376,1.0272907,0.038844492,1.0272907,"up","NR2F6",2063.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0030522 // intracellular receptor mediated signaling pathway // traceable author statement /// 0030522 // intracellular receptor mediated signaling pathway // inferred from electronic annotation /// 0043153 // entrainment of circadian clock by photoperiod // inferred from electronic annotation /// 0043401 // steroid hormone mediated signaling pathway // traceable author statement /// 0043401 // steroid hormone mediated signaling pathway // inferred from electronic annotation /// 0048666 // neuron development // inferred from electronic annotation /// 0050965 // detection of temperature stimulus involved in sensory perception of pain // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003707 // steroid hormone receptor activity // inferred from electronic annotation /// 0003707 // steroid hormone receptor activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0004879 // ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity // traceable author statement /// 0004879 // ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from electronic annotation /// 0004887 // thyroid hormone receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:17342691-17356466 (-) // 89.61 // p13.11"]
["11747391_x_at",-0.11893439,0.13805032,0.08649492,-0.08234,0.08234,-0.11548281,0.7979247,0.50006187,1.0524107,0.07369785,1.0524107,"up","FBXO44",93611.0,"0030163 // protein catabolic process // inferred from electronic annotation","0019005 // SCF ubiquitin ligase complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr1:11714927-11721923 (+) // 94.43 // p36.22"]
["11733521_at",0.007505417,-0.0028934479,-0.13686275,0.08699417,0.0028934479,-0.0484581,0.7371543,0.39625308,-1.0409447,-0.05789342,1.0409447,"down","NTSR1",4923.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0008344 // adult locomotory behavior // inferred from electronic annotation","0005783 // endoplasmic reticulum // traceable author statement /// 0005794 // Golgi apparatus // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0016492 // G-protein coupled neurotensin receptor activity // inferred from electronic annotation","chr20:61340188-61394123 (+) // 93.32 // q13.33"]
["11761143_x_at",0.07131767,-0.11778593,0.2674384,-0.07131767,0.13469648,-0.08174896,0.83610755,0.5772489,1.056857,0.07978017,1.056857,"up","TP53",7157.0,"0000060 // protein import into nucleus, translocation // inferred from electronic annotation /// 0000075 // cell cycle checkpoint // traceable author statement /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // not recorded /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0000733 // DNA strand renaturation // inferred from direct assay /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001756 // somitogenesis // inferred from electronic annotation /// 0001836 // release of cytochrome c from mitochondria // inferred from electronic annotation /// 0002309 // T cell proliferation involved in immune response // inferred from electronic annotation /// 0002326 // B cell lineage commitment // inferred from electronic annotation /// 0002360 // T cell lineage commitment // inferred from electronic annotation /// 0006284 // base-excision repair // traceable author statement /// 0006289 // nucleotide-excision repair // inferred from mutant phenotype /// 0006302 // double-strand break repair // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006461 // protein complex assembly // inferred from direct assay /// 0006915 // apoptotic process // inferred from direct assay /// 0006915 // apoptotic process // inferred from mutant phenotype /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from direct assay /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // inferred from electronic annotation /// 0006978 // DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator // inferred from mutant phenotype /// 0006983 // ER overload response // inferred from direct assay /// 0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from direct assay /// 0007050 // cell cycle arrest // inferred from mutant phenotype /// 0007265 // Ras protein signal transduction // inferred from expression pattern /// 0007275 // multicellular organismal development // inferred from mutant phenotype /// 0007369 // gastrulation // inferred from electronic annotation /// 0007406 // negative regulation of neuroblast proliferation // inferred from electronic annotation /// 0007417 // central nervous system development // inferred from electronic annotation /// 0007569 // cell aging // inferred from mutant phenotype /// 0007569 // cell aging // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008104 // protein localization // inferred from direct assay /// 0008156 // negative regulation of DNA replication // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from sequence or structural similarity /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0008340 // determination of adult lifespan // inferred from sequence or structural similarity /// 0008340 // determination of adult lifespan // inferred from electronic annotation /// 0008629 // induction of apoptosis by intracellular signals // traceable author statement /// 0009303 // rRNA transcription // inferred from electronic annotation /// 0009411 // response to UV // inferred from electronic annotation /// 0009792 // embryo development ending in birth or egg hatching // inferred from electronic annotation /// 0010165 // response to X-ray // not recorded /// 0010165 // response to X-ray // inferred from electronic annotation /// 0010332 // response to gamma radiation // inferred from mutant phenotype /// 0010332 // response to gamma radiation // inferred from electronic annotation /// 0030154 // cell differentiation // traceable author statement /// 0030308 // negative regulation of cell growth // inferred from mutant phenotype /// 0030330 // DNA damage response, signal transduction by p53 class mediator // inferred from direct assay /// 0030330 // DNA damage response, signal transduction by p53 class mediator // inferred from mutant phenotype /// 0030330 // DNA damage response, signal transduction by p53 class mediator // inferred from electronic annotation /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0031065 // positive regulation of histone deacetylation // not recorded /// 0031065 // positive regulation of histone deacetylation // inferred from electronic annotation /// 0031571 // mitotic cell cycle G1/S transition DNA damage checkpoint // inferred from mutant phenotype /// 0031571 // mitotic cell cycle G1/S transition DNA damage checkpoint // inferred from electronic annotation /// 0032461 // positive regulation of protein oligomerization // inferred from direct assay /// 0033077 // T cell differentiation in thymus // inferred from electronic annotation /// 0034613 // cellular protein localization // inferred from direct assay /// 0034644 // cellular response to UV // not recorded /// 0034644 // cellular response to UV // inferred from electronic annotation /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0035690 // cellular response to drug // inferred from expression pattern /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042149 // cellular response to glucose starvation // inferred from direct assay /// 0042493 // response to drug // inferred from electronic annotation /// 0042771 // DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis // inferred from direct assay /// 0042771 // DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043523 // regulation of neuron apoptotic process // inferred from electronic annotation /// 0043525 // positive regulation of neuron apoptotic process // not recorded /// 0043525 // positive regulation of neuron apoptotic process // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from genetic interaction /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046677 // response to antibiotic // inferred from expression pattern /// 0046902 // regulation of mitochondrial membrane permeability // traceable author statement /// 0046902 // regulation of mitochondrial membrane permeability // inferred from electronic annotation /// 0048147 // negative regulation of fibroblast proliferation // inferred from mutant phenotype /// 0048147 // negative regulation of fibroblast proliferation // inferred from electronic annotation /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from sequence or structural similarity /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0051097 // negative regulation of helicase activity // traceable author statement /// 0051262 // protein tetramerization // traceable author statement /// 0051262 // protein tetramerization // inferred from electronic annotation /// 0051276 // chromosome organization // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from electronic annotation /// 0070245 // positive regulation of thymocyte apoptotic process // inferred from sequence or structural similarity /// 0070245 // positive regulation of thymocyte apoptotic process // inferred from electronic annotation /// 0071158 // positive regulation of cell cycle arrest // inferred from mutant phenotype /// 0071456 // cellular response to hypoxia // inferred from expression pattern /// 0071479 // cellular response to ionizing radiation // inferred from mutant phenotype /// 0071850 // mitotic cell cycle arrest // inferred from electronic annotation /// 0072332 // signal transduction by p53 class mediator resulting in induction of apoptosis // inferred from mutant phenotype /// 0090200 // positive regulation of release of cytochrome c from mitochondria // inferred from direct assay /// 0090343 // positive regulation of cell aging // inferred from electronic annotation /// 0090399 // replicative senescence // inferred from mutant phenotype /// 0090403 // oxidative stress-induced premature senescence // inferred from mutant phenotype /// 2000379 // positive regulation of reactive oxygen species metabolic process // inferred from mutant phenotype /// 2001244 // positive regulation of intrinsic apoptotic signaling pathway // inferred from mutant phenotype","0000785 // chromatin // not recorded /// 0000790 // nuclear chromatin // inferred from direct assay /// 0005626 // insoluble fraction // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005657 // replication fork // not recorded /// 0005657 // replication fork // inferred from electronic annotation /// 0005669 // transcription factor TFIID complex // inferred from direct assay /// 0005678 // chromatin assembly complex // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005829 // cytosol // not recorded /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0016363 // nuclear matrix // inferred from direct assay /// 0016604 // nuclear body // inferred from direct assay /// 0016605 // PML body // inferred from direct assay /// 0016605 // PML body // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay","0000739 // DNA strand annealing activity // inferred from direct assay /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from electronic annotation /// 0001085 // RNA polymerase II transcription factor binding // inferred from physical interaction /// 0002020 // protease binding // inferred from physical interaction /// 0002039 // p53 binding // not recorded /// 0003677 // DNA binding // inferred from mutant phenotype /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from direct assay /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003684 // damaged DNA binding // not recorded /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005507 // copper ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008270 // zinc ion binding // traceable author statement /// 0019899 // enzyme binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0035033 // histone deacetylase regulator activity // inferred from electronic annotation /// 0035035 // histone acetyltransferase binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from physical interaction /// 0047485 // protein N-terminus binding // inferred from physical interaction /// 0051087 // chaperone binding // inferred from physical interaction /// 0051721 // protein phosphatase 2A binding // inferred from physical interaction /// 0070215 // MDM2 binding // inferred from electronic annotation","chr17:7577852-7590843 (-) // 80.92 // p13.1"]
["11715516_x_at",0.023794174,0.027452469,0.17901611,-0.047839165,-0.023794174,-0.029922485,0.45676315,0.098917216,1.0796818,0.11060613,1.0796818,"up","PSMD3",5709.0,"0000075 // cell cycle checkpoint // traceable author statement /// 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000084 // S phase of mitotic cell cycle // traceable author statement /// 0000209 // protein polyubiquitination // traceable author statement /// 0000216 // M/G1 transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042176 // regulation of protein catabolic process // inferred from electronic annotation /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0050790 // regulation of catalytic activity // inferred from electronic annotation /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement","0000502 // proteasome complex // inferred from electronic annotation /// 0000502 // proteasome complex // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement","0030234 // enzyme regulator activity // inferred from electronic annotation","chr17:38136891-38154207 (+) // 86.51 // q21.1"]
["11743611_a_at",-0.021209717,0.029066086,0.062169075,-0.019810677,0.019810677,-0.06600189,0.63990265,0.26109084,1.0319281,0.0453424,1.0319281,"up","ZMYND11",10771.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0043124 // negative regulation of I-kappaB kinase/NF-kappaB cascade // inferred from mutant phenotype /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0046329 // negative regulation of JNK cascade // inferred from mutant phenotype /// 2001237 // negative regulation of extrinsic apoptotic signaling pathway // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr10:180423-300574 (+) // 98.87 // p15.3"]
["11725453_at",0.0045075417,0.16279459,-0.0045075417,-0.038149357,-0.07431865,0.18592787,0.9246513,0.77607405,1.0208552,0.02977823,1.0208552,"up","NAT8 /// NAT8B","51471 /// 9027","0001702 // gastrulation with mouth forming second // non-traceable author statement /// 0001702 // gastrulation with mouth forming second // inferred from mutant phenotype /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007369 // gastrulation // inferred from electronic annotation /// 0042493 // response to drug // traceable author statement","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0008080 // N-acetyltransferase activity // non-traceable author statement /// 0008080 // N-acetyltransferase activity // inferred from electronic annotation /// 0008080 // N-acetyltransferase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation","chr2:73867836-73869975 (-) // 88.81 // p13.1 /// chr2:73927518-73929634 (-) // 82.26 // p13.1"]
["11753427_a_at",0.05443096,0.007045269,0.0089559555,-0.06830549,-0.007045269,-0.015241623,0.4498812,0.09517681,1.0379053,0.053674866,1.0379053,"up","RND3",390.0,"0006184 // GTP catabolic process // traceable author statement /// 0007155 // cell adhesion // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // traceable author statement","0000139 // Golgi membrane // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0005525 // GTP binding // inferred from electronic annotation /// 0005525 // GTP binding // traceable author statement","chr2:151326303-151343614 (-) // 99.78 // q23.3"]
["11729117_a_at",0.017273188,-0.12277079,0.17350602,0.1390121,-0.017273188,-0.21520877,0.89529383,0.70746136,1.0380142,0.053826142,1.0380142,"up","PRKCG",5582.0,"0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007202 // activation of phospholipase C activity // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0007611 // learning or memory // inferred from electronic annotation /// 0007635 // chemosensory behavior // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0016310 // phosphorylation // inferred from direct assay /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0031397 // negative regulation of protein ubiquitination // inferred from direct assay /// 0032425 // positive regulation of mismatch repair // inferred from direct assay /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0042177 // negative regulation of protein catabolic process // inferred from direct assay /// 0043278 // response to morphine // inferred from sequence or structural similarity /// 0043524 // negative regulation of neuron apoptotic process // inferred from sequence or structural similarity /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048265 // response to pain // inferred from sequence or structural similarity","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030425 // dendrite // inferred from sequence or structural similarity /// 0030425 // dendrite // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004697 // protein kinase C activity // inferred from electronic annotation /// 0004697 // protein kinase C activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:54385413-54410905 (+) // 96.98 // q13.42"]
["11746859_a_at",-0.08366203,0.008538961,-0.103150606,0.06826067,0.0109632015,-0.008538723,0.48562762,0.11580247,-1.0592083,-0.082986295,1.0592083,"down","LPA",4018.0,"0006508 // proteolysis // inferred from electronic annotation /// 0006629 // lipid metabolic process // traceable author statement /// 0006629 // lipid metabolic process // non-traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // inferred from electronic annotation /// 0006898 // receptor-mediated endocytosis // traceable author statement /// 0008015 // blood circulation // traceable author statement /// 0010951 // negative regulation of endopeptidase activity // traceable author statement /// 0042157 // lipoprotein metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0034358 // plasma lipoprotein particle // inferred from direct assay","0001968 // fibronectin binding // inferred from physical interaction /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from direct assay /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0004866 // endopeptidase inhibitor activity // traceable author statement /// 0008201 // heparin binding // non-traceable author statement /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0034185 // apolipoprotein binding // inferred from physical interaction","chr6:160874226-161071528 (-) // 45.99 // q25.3"]
["11759480_s_at",-0.040711403,-0.018651962,-0.0099983215,0.021308899,0.0099983215,0.01850605,0.23349088,0.015195832,-1.0279179,-0.039724987,1.0279179,"down","PTP4A2",8073.0,"0006470 // protein dephosphorylation // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0004727 // prenylated protein tyrosine phosphatase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation","chr1:32372023-32403955 (-) // 88.6 // p35.2"]
["11744799_a_at",0.009750843,-0.009750366,0.10339165,-0.050707817,0.10809469,-0.06299639,0.851199,0.60721886,1.0255046,0.03633395,1.0255046,"up","XRCC4",7518.0,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0002328 // pro-B cell differentiation // inferred from electronic annotation /// 0006266 // DNA ligation // inferred from electronic annotation /// 0006281 // DNA repair // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006302 // double-strand break repair // inferred from direct assay /// 0006302 // double-strand break repair // traceable author statement /// 0006302 // double-strand break repair // inferred from electronic annotation /// 0006303 // double-strand break repair via nonhomologous end joining // inferred from direct assay /// 0006303 // double-strand break repair via nonhomologous end joining // inferred from mutant phenotype /// 0006303 // double-strand break repair via nonhomologous end joining // non-traceable author statement /// 0006303 // double-strand break repair via nonhomologous end joining // traceable author statement /// 0006303 // double-strand break repair via nonhomologous end joining // inferred from electronic annotation /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007417 // central nervous system development // inferred from electronic annotation /// 0010165 // response to X-ray // inferred from direct assay /// 0010165 // response to X-ray // inferred from electronic annotation /// 0010212 // response to ionizing radiation // inferred from electronic annotation /// 0010332 // response to gamma radiation // inferred from electronic annotation /// 0016032 // viral reproduction // traceable author statement /// 0019047 // provirus integration // traceable author statement /// 0019059 // initiation of viral infection // traceable author statement /// 0033077 // T cell differentiation in thymus // inferred from electronic annotation /// 0033151 // V(D)J recombination // inferred from electronic annotation /// 0033152 // immunoglobulin V(D)J recombination // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0045190 // isotype switching // inferred from electronic annotation /// 0048146 // positive regulation of fibroblast proliferation // inferred from electronic annotation /// 0050769 // positive regulation of neurogenesis // inferred from electronic annotation /// 0051103 // DNA ligation involved in DNA repair // inferred from direct assay /// 0051351 // positive regulation of ligase activity // inferred from direct assay /// 0071285 // cellular response to lithium ion // inferred from electronic annotation","0000793 // condensed chromosome // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005829 // cytosol // inferred from direct assay /// 0005958 // DNA-dependent protein kinase-DNA ligase 4 complex // inferred from direct assay /// 0005958 // DNA-dependent protein kinase-DNA ligase 4 complex // inferred from electronic annotation /// 0032807 // DNA ligase IV complex // inferred from direct assay /// 0070419 // nonhomologous end joining complex // inferred from direct assay","0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0016874 // ligase activity // inferred from direct assay","chr5:82373375-82554491 (+) // 75.0 // q14.2"]
["11747307_a_at",-0.046394825,0.09241295,0.088801384,0.03915119,-0.22094679,-0.03915119,0.6357364,0.2560741,1.0856724,0.118588805,1.0856724,"up","GDI1",2664.0,"0007165 // signal transduction // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0030496 // midbody // inferred from direct assay","0005092 // GDP-dissociation inhibitor activity // traceable author statement /// 0005093 // Rab GDP-dissociation inhibitor activity // inferred from electronic annotation /// 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chrX:153665499-153669651 (+) // 93.57 // q28"]
["11742421_s_at",-0.042981863,0.14458275,-0.2892542,0.1576376,-0.14950323,0.042981625,0.8628685,0.6331958,-1.0567175,-0.07958976,1.0567175,"down","GRM5",2915.0,"0000185 // activation of MAPKKK activity // inferred from electronic annotation /// 0002029 // desensitization of G-protein coupled receptor protein signaling pathway // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007205 // protein kinase C-activating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007206 // phospholipase C-activating G-protein coupled glutamate receptor signaling pathway // traceable author statement /// 0007268 // synaptic transmission // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007612 // learning // inferred from electronic annotation /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0040013 // negative regulation of locomotion // inferred from electronic annotation /// 0048169 // regulation of long-term neuronal synaptic plasticity // inferred from electronic annotation /// 0048170 // positive regulation of long-term neuronal synaptic plasticity // inferred from electronic annotation","0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from electronic annotation /// 0043198 // dendritic shaft // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement /// 0008066 // glutamate receptor activity // traceable author statement /// 0031687 // A2A adenosine receptor binding // inferred from electronic annotation","chr11:88237743-88796816 (-) // 99.22 // q14.2"]
["11733478_at",-0.0024638176,0.09615207,-0.07303786,-0.16159296,0.0024638176,0.11344457,0.94225633,0.82513,1.0154446,0.022111584,1.0154446,"up","OLIG3",167826.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation","chr6:137813340-137815619 (-) // 96.65 // q23.3"]
["11750876_a_at",-0.0029706955,-0.048743248,0.049632072,7.715225E-4,0.0028734207,-7.715225E-4,0.9868992,0.9564729,-1.0011456,-0.0016518072,1.0011456,"down","SCFD1",23256.0,"0001666 // response to hypoxia // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006890 // retrograde vesicle-mediated transport, Golgi to ER // inferred from sequence or structural similarity /// 0006890 // retrograde vesicle-mediated transport, Golgi to ER // inferred from electronic annotation /// 0006892 // post-Golgi vesicle-mediated transport // inferred from sequence or structural similarity /// 0006892 // post-Golgi vesicle-mediated transport // inferred from electronic annotation /// 0006904 // vesicle docking involved in exocytosis // inferred from electronic annotation /// 0009636 // response to toxin // inferred from expression pattern /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0060628 // regulation of ER to Golgi vesicle-mediated transport // inferred from sequence or structural similarity /// 0060628 // regulation of ER to Golgi vesicle-mediated transport // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005798 // Golgi-associated vesicle // inferred from sequence or structural similarity /// 0005798 // Golgi-associated vesicle // inferred from electronic annotation /// 0005801 // cis-Golgi network // inferred from direct assay /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0017119 // Golgi transport complex // inferred from sequence or structural similarity /// 0017119 // Golgi transport complex // inferred from electronic annotation /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation","0019905 // syntaxin binding // inferred from sequence or structural similarity /// 0047485 // protein N-terminus binding // inferred from electronic annotation","chr14:31091524-31204898 (+) // 97.02 // q12"]
["11744837_a_at",0.002860546,-0.002860546,0.10201645,-0.023051262,-0.08071375,0.07296276,0.7862814,0.47550964,1.0311633,0.04427287,1.0311633,"up","CDH13",1012.0,"0001938 // positive regulation of endothelial cell proliferation // inferred from mutant phenotype /// 0001954 // positive regulation of cell-matrix adhesion // inferred from mutant phenotype /// 0002040 // sprouting angiogenesis // inferred from direct assay /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from direct assay /// 0007156 // homophilic cell adhesion // inferred from electronic annotation /// 0007162 // negative regulation of cell adhesion // inferred from direct assay /// 0007266 // Rho protein signal transduction // inferred from mutant phenotype /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0016339 // calcium-dependent cell-cell adhesion // inferred from direct assay /// 0016601 // Rac protein signal transduction // inferred from mutant phenotype /// 0030032 // lamellipodium assembly // inferred from direct assay /// 0030100 // regulation of endocytosis // inferred from mutant phenotype /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0034329 // cell junction assembly // traceable author statement /// 0034332 // adherens junction organization // traceable author statement /// 0042058 // regulation of epidermal growth factor receptor signaling pathway // inferred from mutant phenotype /// 0043542 // endothelial cell migration // inferred from direct assay /// 0043616 // keratinocyte proliferation // inferred from direct assay /// 0045216 // cell-cell junction organization // traceable author statement /// 0045885 // positive regulation of survival gene product expression // inferred from mutant phenotype /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from mutant phenotype /// 0050850 // positive regulation of calcium-mediated signaling // inferred from direct assay /// 0050927 // positive regulation of positive chemotaxis // inferred from direct assay /// 0051668 // localization within membrane // inferred from mutant phenotype /// 0055096 // low-density lipoprotein particle mediated signaling // inferred from direct assay","0005615 // extracellular space // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005901 // caveola // inferred from direct assay /// 0016020 // membrane // inferred from mutant phenotype /// 0016020 // membrane // inferred from electronic annotation /// 0031225 // anchored to membrane // inferred from electronic annotation /// 0043005 // neuron projection // inferred from direct assay","0005509 // calcium ion binding // inferred from electronic annotation /// 0030169 // low-density lipoprotein particle binding // inferred from direct assay /// 0045296 // cadherin binding // inferred from direct assay /// 0055100 // adiponectin binding // inferred from sequence or structural similarity /// 0071813 // lipoprotein particle binding // inferred from direct assay","chr16:82660574-83214683 (+) // 97.37 // q23.3"]
["11737824_a_at",-0.058778763,-0.048181534,0.014245987,0.046055794,0.056178093,-0.014245987,0.50401896,0.12984394,-1.042635,-0.060234144,1.042635,"down","STX16",8675.0,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006891 // intra-Golgi vesicle-mediated transport // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0042147 // retrograde transport, endosome to Golgi // inferred from direct assay","0000139 // Golgi membrane // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005792 // microsome // traceable author statement /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005794 // Golgi apparatus // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031201 // SNARE complex // traceable author statement","0005484 // SNAP receptor activity // inferred from direct assay /// 0005484 // SNAP receptor activity // inferred from electronic annotation /// 0005484 // SNAP receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr20:57226327-57254582 (+) // 93.69 // q13.32"]
["11727400_a_at",-0.18614244,-0.031921387,-0.12431669,0.1196866,0.031921387,0.15264893,0.2573952,0.019968387,-1.1611431,-0.21554573,1.1611431,"down","GSTZ1",2954.0,"0006559 // L-phenylalanine catabolic process // inferred from electronic annotation /// 0006559 // L-phenylalanine catabolic process // traceable author statement /// 0006572 // tyrosine catabolic process // inferred from electronic annotation /// 0006749 // glutathione metabolic process // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation /// 0009072 // aromatic amino acid family metabolic process // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0003824 // catalytic activity // inferred from electronic annotation /// 0004364 // glutathione transferase activity // inferred from direct assay /// 0004364 // glutathione transferase activity // inferred from electronic annotation /// 0004364 // glutathione transferase activity // traceable author statement /// 0004602 // glutathione peroxidase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016034 // maleylacetoacetate isomerase activity // not recorded /// 0016034 // maleylacetoacetate isomerase activity // inferred from direct assay /// 0016034 // maleylacetoacetate isomerase activity // inferred from electronic annotation /// 0016034 // maleylacetoacetate isomerase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from physical interaction","chr14:77787229-77797939 (+) // 90.39 // q24.3"]
["11715710_s_at",0.0013408661,-0.0013408661,0.029977798,0.02702427,-0.025168419,-0.005678177,0.8336127,0.5699922,1.00784,0.011266675,1.00784,"up","CTSC",1075.0,"0001913 // T cell mediated cytotoxicity // inferred from electronic annotation /// 0006508 // proteolysis // inferred from direct assay /// 0006508 // proteolysis // inferred from electronic annotation /// 0006955 // immune response // traceable author statement /// 0007568 // aging // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation","0005764 // lysosome // traceable author statement /// 0005764 // lysosome // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation","0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from direct assay /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0031404 // chloride ion binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from electronic annotation /// 0043621 // protein self-association // inferred from electronic annotation","chr11:88026759-88070941 (-) // 95.96 // q14.2"]
["11720997_a_at",-0.12599277,0.059455395,-0.0472157,0.016126394,0.27292705,-0.016126394,0.66428906,0.29111874,-1.0934546,-0.12889332,1.0934546,"down","ADCY2",108.0,"0006112 // energy reserve metabolic process // traceable author statement /// 0006171 // cAMP biosynthetic process // inferred from sequence or structural similarity /// 0006171 // cAMP biosynthetic process // non-traceable author statement /// 0006171 // cAMP biosynthetic process // inferred from electronic annotation /// 0006833 // water transport // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007188 // adenylate cyclase-modulating G-protein coupled receptor signaling pathway // inferred from sequence or structural similarity /// 0007189 // adenylate cyclase-activating G-protein coupled receptor signaling pathway // traceable author statement /// 0007193 // adenylate cyclase-inhibiting G-protein coupled receptor signaling pathway // traceable author statement /// 0007202 // activation of phospholipase C activity // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0009190 // cyclic nucleotide biosynthetic process // inferred from electronic annotation /// 0034199 // activation of protein kinase A activity // traceable author statement /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0071377 // cellular response to glucagon stimulus // traceable author statement","0005622 // intracellular // inferred from sequence or structural similarity /// 0005622 // intracellular // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030425 // dendrite // inferred from sequence or structural similarity /// 0030425 // dendrite // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0045121 // membrane raft // inferred from sequence or structural similarity","0000166 // nucleotide binding // inferred from electronic annotation /// 0004016 // adenylate cyclase activity // inferred from sequence or structural similarity /// 0004016 // adenylate cyclase activity // non-traceable author statement /// 0004016 // adenylate cyclase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008179 // adenylate cyclase binding // inferred from sequence or structural similarity /// 0008294 // calcium- and calmodulin-responsive adenylate cyclase activity // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0016849 // phosphorus-oxygen lyase activity // inferred from electronic annotation /// 0031683 // G-protein beta/gamma-subunit complex binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from sequence or structural similarity","chr5:7396320-7830194 (+) // 87.29 // p15.31"]
["11730928_a_at",-0.063578606,-0.028330803,0.036262512,0.04965782,-0.19303894,0.02833128,0.941426,0.822986,1.0138196,0.019800926,1.0138196,"up","IKBKB",3551.0,"0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // non-traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006916 // anti-apoptosis // traceable author statement /// 0006954 // inflammatory response // traceable author statement /// 0007249 // I-kappaB kinase/NF-kappaB cascade // traceable author statement /// 0007252 // I-kappaB phosphorylation // traceable author statement /// 0007252 // I-kappaB phosphorylation // inferred from electronic annotation /// 0008063 // Toll signaling pathway // traceable author statement /// 0009615 // response to virus // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0032481 // positive regulation of type I interferon production // traceable author statement /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045893 // positive regulation of transcription, DNA-dependent // non-traceable author statement /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0051092 // positive regulation of NF-kappaB transcription factor activity // traceable author statement /// 0070423 // nucleotide-binding oligomerization domain containing signaling pathway // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0008385 // IkappaB kinase complex // traceable author statement /// 0009898 // internal side of plasma membrane // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0035631 // CD40 receptor complex // inferred from sequence or structural similarity /// 0045121 // membrane raft // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008384 // IkappaB kinase activity // traceable author statement /// 0008384 // IkappaB kinase activity // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction","chr8:42128819-42189956 (+) // 92.16 // p11.21"]
["11759330_at",0.13053179,0.010894775,-0.2607615,-0.010894775,-0.2554276,0.16182518,0.99333394,0.97785676,-1.0034342,-0.0049459883,1.0034342,"down","B3GAT2",135152.0,"0006486 // protein glycosylation // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0015018 // galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity // inferred from sequence or structural similarity /// 0015018 // galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:71566916-71666892 (-) // 99.0 // q13"]
["11753887_x_at",0.04504776,0.027353287,-0.008796692,-0.009811401,-0.009593964,0.008796692,0.6056091,0.21938191,1.0172946,0.024737597,1.0172946,"up","TOMM5",401505.0,"0006626 // protein targeting to mitochondrion // inferred by curator /// 0006626 // protein targeting to mitochondrion // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement","0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005742 // mitochondrial outer membrane translocase complex // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008565 // protein transporter activity // inferred by curator","chr9:37588894-37592529 (-) // 100.0 // p13.2"]
["11744608_a_at",-0.11622524,-0.074276924,-0.0291996,0.051160812,0.0291996,0.13373089,0.27265808,0.023454558,-1.1054224,-0.14459772,1.1054224,"down","PARP3",10039.0,"0006281 // DNA repair // traceable author statement /// 0006471 // protein ADP-ribosylation // inferred from electronic annotation /// 0006471 // protein ADP-ribosylation // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005814 // centriole // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation","0003824 // catalytic activity // traceable author statement /// 0003950 // NAD+ ADP-ribosyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation","chr3:51976315-51982877 (+) // 86.52 // p21.2"]
["11723073_at",0.008429527,-0.0023002625,-3.156662E-4,3.156662E-4,0.09308338,-0.0017995834,0.748635,0.41471606,-1.0200185,-0.02859526,1.0200185,"down","BCL9L",283149.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0010718 // positive regulation of epithelial to mesenchymal transition // inferred from mutant phenotype /// 0022604 // regulation of cell morphogenesis // inferred from mutant phenotype /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // inferred from mutant phenotype /// 0035019 // somatic stem cell maintenance // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype","0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0003713 // transcription coactivator activity // non-traceable author statement /// 0008013 // beta-catenin binding // inferred from direct assay /// 0008013 // beta-catenin binding // inferred from electronic annotation","chr11:118729970-118781613 (-) // 98.06 // q23.3"]
["11732633_at",-0.07180023,-0.067819595,-0.06720257,0.067203045,0.1644125,0.11895418,0.12395789,0.0027189124,-1.1374454,-0.18579735,1.1374454,"down","HOXA7",3204.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001525 // angiogenesis // inferred from expression pattern /// 0001953 // negative regulation of cell-matrix adhesion // inferred from direct assay /// 0002686 // negative regulation of leukocyte migration // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0045617 // negative regulation of keratinocyte differentiation // inferred from direct assay /// 0045656 // negative regulation of monocyte differentiation // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048704 // embryonic skeletal system morphogenesis // inferred from electronic annotation /// 0048863 // stem cell differentiation // inferred from electronic annotation","0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr7:27193339-27196298 (-) // 95.94 // p15.2"]
["11717008_a_at",0.09104061,0.03133869,0.058722496,-0.14051533,-0.03133869,-0.14548874,0.23521121,0.01550932,1.1220587,0.16614822,1.1220587,"up","BNIP3L",665.0,"0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from direct assay /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0008634 // negative regulation of survival gene product expression // inferred from direct assay /// 0035694 // mitochondrial protein catabolic process // inferred from mutant phenotype /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0051607 // defense response to virus // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from direct assay /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005740 // mitochondrial envelope // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from mutant phenotype /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031224 // intrinsic to membrane // traceable author statement","0005515 // protein binding // inferred from physical interaction /// 0005521 // lamin binding // inferred from direct assay /// 0005521 // lamin binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from direct assay","chr8:26240413-26270641 (+) // 97.27 // p21.2"]
["11716525_a_at",-0.04433155,0.029876709,0.0052862167,-0.0062532425,0.0076055527,-0.0052862167,0.9825504,0.9413289,-1.0012102,-0.0017449122,1.0012102,"down","LOC100130872 /// SPON2","100130872 /// 10417","0007155 // cell adhesion // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation","0005102 // receptor binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr4:1160719-1166661 (-) // 95.6 // p16.3"]
["11736929_at",-0.021762848,0.012794495,-0.07310057,-0.012794495,0.03106165,0.023908138,0.6050353,0.21866332,-1.0291225,-0.04141468,1.0291225,"down","G6PC",2538.0,"0005975 // carbohydrate metabolic process // traceable author statement /// 0005977 // glycogen metabolic process // traceable author statement /// 0005977 // glycogen metabolic process // inferred from electronic annotation /// 0005980 // glycogen catabolic process // inferred from electronic annotation /// 0006094 // gluconeogenesis // inferred from electronic annotation /// 0006094 // gluconeogenesis // inferred from mutant phenotype /// 0006641 // triglyceride metabolic process // inferred from electronic annotation /// 0008202 // steroid metabolic process // inferred from electronic annotation /// 0008645 // hexose transport // traceable author statement /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0015758 // glucose transport // traceable author statement /// 0015760 // glucose-6-phosphate transport // inferred from electronic annotation /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0042593 // glucose homeostasis // inferred from mutant phenotype /// 0042593 // glucose homeostasis // inferred from electronic annotation /// 0042632 // cholesterol homeostasis // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046415 // urate metabolic process // inferred from electronic annotation /// 0051156 // glucose 6-phosphate metabolic process // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030176 // integral to endoplasmic reticulum membrane // traceable author statement","0003824 // catalytic activity // inferred from electronic annotation /// 0004346 // glucose-6-phosphatase activity // inferred from direct assay /// 0004346 // glucose-6-phosphatase activity // inferred from electronic annotation /// 0016773 // phosphotransferase activity, alcohol group as acceptor // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042301 // phosphate ion binding // inferred from mutant phenotype","chr17:41052814-41065386 (+) // 82.52 // q21.31"]
["11741009_a_at",0.048381805,-0.13630223,0.26342654,-0.048381805,0.14676237,-0.13138938,0.8699578,0.6499281,1.0493566,0.069505,1.0493566,"up","FGF12",2257.0,"0007165 // signal transduction // traceable author statement /// 0007254 // JNK cascade // inferred from physical interaction /// 0007267 // cell-cell signaling // traceable author statement /// 0007399 // nervous system development // traceable author statement /// 0007507 // heart development // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from direct assay","0005615 // extracellular space // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement","0005104 // fibroblast growth factor receptor binding // inferred from direct assay /// 0008083 // growth factor activity // inferred from electronic annotation /// 0008083 // growth factor activity // traceable author statement /// 0008201 // heparin binding // inferred from direct assay","chr3:191859683-192445388 (-) // 96.73 // q28"]
["11745631_a_at",-0.01804781,-0.05954361,0.004061699,0.07006693,-0.004061699,0.08374262,0.43705767,0.08738499,-1.0529419,-0.074425854,1.0529419,"down","NHS",4810.0,"0002088 // lens development in camera-type eye // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","","chrX:17393356-17750620 (+) // 96.57 // p22.13"]
["11756972_x_at",-0.0049180984,0.008899689,0.07804775,-0.038996696,0.004917145,-0.061566353,0.518664,0.14011651,1.041906,0.059225123,1.041906,"up","YBX1",4904.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0045892 // negative regulation of transcription, DNA-dependent // non-traceable author statement /// 0051154 // negative regulation of striated muscle cell differentiation // inferred from electronic annotation /// 0051781 // positive regulation of cell division // inferred from electronic annotation /// 0070934 // CRD-mediated mRNA stabilization // inferred from mutant phenotype","0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005689 // U12-type spliceosomal complex // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0010494 // cytoplasmic stress granule // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0070937 // CRD-mediated mRNA stability complex // inferred from direct assay /// 0071204 // histone pre-mRNA 3'end processing complex // inferred from sequence or structural similarity /// 0071204 // histone pre-mRNA 3'end processing complex // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // traceable author statement /// 0003697 // single-stranded DNA binding // inferred from electronic annotation /// 0003697 // single-stranded DNA binding // traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003723 // RNA binding // inferred from direct assay /// 0003723 // RNA binding // non-traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr1:43148657-43168013 (+) // 96.87 // p34.2"]
["11743909_at",0.053108215,-0.0017967224,0.08109856,0.0017967224,-0.059318542,-0.021448135,0.42495614,0.079745494,1.0500515,0.07046002,1.0500515,"up","ALG14",199857.0,"0006488 // dolichol-linked oligosaccharide biosynthetic process // traceable author statement /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr1:95447797-95538507 (-) // 85.06 // p21.3"]
["11761998_a_at",-0.12884617,0.08128023,-0.14332771,-0.010361671,0.10011387,0.010361671,0.66517055,0.29256737,-1.069549,-0.09700253,1.069549,"down","HDAC4",9759.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001501 // skeletal system development // inferred from electronic annotation /// 0002076 // osteoblast development // inferred from electronic annotation /// 0006338 // chromatin remodeling // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006954 // inflammatory response // traceable author statement /// 0007399 // nervous system development // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0010832 // negative regulation of myotube differentiation // inferred from mutant phenotype /// 0010882 // regulation of cardiac muscle contraction by calcium ion signaling // inferred from electronic annotation /// 0014894 // response to denervation involved in regulation of muscle adaptation // inferred from sequence or structural similarity /// 0014894 // response to denervation involved in regulation of muscle adaptation // inferred from electronic annotation /// 0014898 // cardiac muscle hypertrophy in response to stress // traceable author statement /// 0016568 // chromatin modification // inferred from electronic annotation /// 0016575 // histone deacetylation // inferred from direct assay /// 0016575 // histone deacetylation // inferred from mutant phenotype /// 0016575 // histone deacetylation // inferred from electronic annotation /// 0030183 // B cell differentiation // traceable author statement /// 0033235 // positive regulation of protein sumoylation // inferred from direct assay /// 0034983 // peptidyl-lysine deacetylation // inferred from direct assay /// 0042113 // B cell activation // traceable author statement /// 0043393 // regulation of protein binding // inferred from mutant phenotype /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // inferred from mutant phenotype /// 0045668 // negative regulation of osteoblast differentiation // inferred from electronic annotation /// 0045820 // negative regulation of glycolysis // inferred from sequence or structural similarity /// 0045820 // negative regulation of glycolysis // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from mutant phenotype /// 0070555 // response to interleukin-1 // inferred from mutant phenotype /// 0070932 // histone H3 deacetylation // inferred from direct assay /// 0070933 // histone H4 deacetylation // inferred from direct assay","0000118 // histone deacetylase complex // inferred from direct assay /// 0000118 // histone deacetylase complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0017053 // transcriptional repressor complex // inferred from direct assay /// 0031594 // neuromuscular junction // inferred from electronic annotation /// 0042641 // actomyosin // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003714 // transcription corepressor activity // inferred from electronic annotation /// 0004407 // histone deacetylase activity // inferred from direct assay /// 0004407 // histone deacetylase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0030955 // potassium ion binding // inferred from direct assay /// 0031078 // histone deacetylase activity (H3-K14 specific) // inferred from electronic annotation /// 0032041 // NAD-dependent histone deacetylase activity (H3-K14 specific) // inferred from electronic annotation /// 0032129 // histone deacetylase activity (H3-K9 specific) // inferred from electronic annotation /// 0033558 // protein deacetylase activity // inferred from direct assay /// 0033558 // protein deacetylase activity // inferred from electronic annotation /// 0033613 // activating transcription factor binding // inferred from physical interaction /// 0034739 // histone deacetylase activity (H4-K16 specific) // inferred from electronic annotation /// 0042826 // histone deacetylase binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0046969 // NAD-dependent histone deacetylase activity (H3-K9 specific) // inferred from electronic annotation /// 0046970 // NAD-dependent histone deacetylase activity (H4-K16 specific) // inferred from electronic annotation /// 0070491 // repressing transcription factor binding // inferred from physical interaction","chr2:240016194-240112752 (-) // 93.12 // q37.3"]
["11747506_a_at",0.014640808,-0.016806602,0.08797741,-0.016789436,-0.007996559,0.007996559,0.70295787,0.34378195,1.0239891,0.034200333,1.0239891,"up","NAP1L4",4676.0,"0006334 // nucleosome assembly // inferred from electronic annotation /// 0006334 // nucleosome assembly // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005678 // chromatin assembly complex // traceable author statement /// 0005737 // cytoplasm // traceable author statement","0051082 // unfolded protein binding // traceable author statement","chr11:2966341-3013530 (-) // 98.83 // p15.4"]
["11728878_s_at",-0.030078411,-0.07490635,0.21458578,-0.3513255,0.06380415,0.030078411,0.7923845,0.4887659,1.088505,0.12234807,1.088505,"up","ARID1B",57492.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0048096 // chromatin-mediated maintenance of transcription // non-traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0016514 // SWI/SNF complex // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from direct assay /// 0003713 // transcription coactivator activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr6:157099085-157530396 (+) // 91.62 // q25.3"]
["11743375_s_at",-0.032382965,-0.080607414,0.032382965,0.09643221,-0.036356926,0.15113974,0.5925403,0.20646177,-1.0697503,-0.097274095,1.0697503,"down","FRYL",285527.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","","","chr4:48499379-48782329 (-) // 99.29 // p11"]
["11734920_s_at",-0.02812004,-0.089035034,0.097186565,-0.054109573,0.09296751,0.02812004,0.8901012,0.69766605,-1.020292,-0.02898216,1.020292,"down","PCYOX1L",78991.0,"0030328 // prenylcysteine catabolic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016670 // oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor // inferred from electronic annotation","chr5:148737569-148749221 (+) // 98.13 // q32"]
["11747152_a_at",-0.16782188,-0.22277308,-0.0771122,0.19070959,0.077112675,0.2058506,0.16465795,0.0059281513,-1.2429717,-0.3137934,1.2429717,"down","PHLDB2",90102.0,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0016042 // lipid catabolic process // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0045111 // intermediate filament cytoskeleton // inferred from direct assay","0004629 // phospholipase C activity // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0008081 // phosphoric diester hydrolase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr3:111578596-111604641 (+) // 94.65 // q13.2"]
["11716932_a_at",0.031155586,0.04634142,-0.052888393,-0.09432793,0.0055823326,-0.0055828094,0.7525184,0.42018744,1.0278614,0.03964568,1.0278614,"up","CCDC80",151887.0,"0010811 // positive regulation of cell-substrate adhesion // inferred from electronic annotation /// 0030198 // extracellular matrix organization // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005604 // basement membrane // inferred from electronic annotation /// 0005614 // interstitial matrix // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from electronic annotation","0001968 // fibronectin binding // inferred from electronic annotation /// 0005539 // glycosaminoglycan binding // inferred from electronic annotation /// 0008201 // heparin binding // inferred from electronic annotation","chr3:112323006-112360270 (-) // 86.91 // q13.2"]
["11723116_a_at",-0.1750536,-0.0047597885,-0.0635376,0.02308178,0.041167736,0.0047593117,0.4770504,0.11091356,-1.0748385,-0.10411993,1.0748385,"down","RAD51L3-RFFL /// RFFL","100529207 /// 117584","0006886 // intracellular protein transport // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:33335964-33416294 (-) // 90.59 // q12"]
["11758237_s_at",-0.21108413,0.09404516,-0.14267373,0.09055853,-0.016363382,0.016363144,0.669129,0.29809058,-1.0842948,-0.11675704,1.0842948,"down","EIF2C4",192670.0,"0006402 // mRNA catabolic process // inferred from direct assay /// 0006413 // translational initiation // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0007219 // Notch signaling pathway // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0031047 // gene silencing by RNA // inferred from electronic annotation /// 0035278 // negative regulation of translation involved in gene silencing by miRNA // inferred from direct assay","0000932 // cytoplasmic mRNA processing body // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0035068 // micro-ribonucleoprotein complex // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr1:36319722-36320529 (+) // 89.57 // p34.3"]
["11745813_a_at",0.09884691,-0.024699211,0.1607709,-0.009322643,0.009322643,-0.033983707,0.57010984,0.1843482,1.0641003,0.0896341,1.0641003,"up","DBNDD1",79007.0,"","0005737 // cytoplasm // inferred from electronic annotation","","chr16:90071280-90086539 (-) // 94.95 // q24.3"]
["11756312_a_at",-0.022877216,0.022877216,-0.37605023,0.2544272,0.08541083,-0.06099415,0.6179254,0.23313408,-1.1633604,-0.21829805,1.1633604,"down","SERPINF1",5176.0,"0001822 // kidney development // inferred from electronic annotation /// 0007275 // multicellular organismal development // traceable author statement /// 0007568 // aging // inferred from electronic annotation /// 0007614 // short-term memory // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0010951 // negative regulation of endopeptidase activity // not recorded /// 0016525 // negative regulation of angiogenesis // inferred from direct assay /// 0016525 // negative regulation of angiogenesis // inferred from electronic annotation /// 0030162 // regulation of proteolysis // not recorded /// 0032526 // response to retinoic acid // inferred from electronic annotation /// 0050728 // negative regulation of inflammatory response // inferred from electronic annotation /// 0050769 // positive regulation of neurogenesis // inferred from direct assay /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation /// 0060770 // negative regulation of epithelial cell proliferation involved in prostate gland development // inferred from electronic annotation","0005576 // extracellular region // inferred from direct assay /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from direct assay /// 0042470 // melanosome // inferred from electronic annotation","0004867 // serine-type endopeptidase inhibitor activity // not recorded /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0004867 // serine-type endopeptidase inhibitor activity // traceable author statement","chr17:1665369-1680827 (+) // 93.97 // p13.3"]
["11757272_a_at",0.016933441,0.004924774,-0.055713654,-0.0049743652,-0.004924774,0.037005424,0.7912643,0.4856035,-1.0141848,-0.020320604,1.0141848,"down","JTB",10899.0,"0006915 // apoptotic process // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from mutant phenotype /// 0007067 // mitosis // inferred from electronic annotation /// 0033205 // cell cycle cytokinesis // inferred from mutant phenotype /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0045860 // positive regulation of protein kinase activity // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // inferred from direct assay /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030496 // midbody // inferred from direct assay","0019901 // protein kinase binding // inferred from direct assay","chr1:153946986-153948382 (-) // 83.94 // q21.3"]
["11729753_at",0.07640982,0.24174309,-0.16480064,0.025375843,-0.025375843,-0.036684513,0.8585374,0.62431026,1.044886,0.06334554,1.044886,"up","ULK2",9706.0,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0006914 // autophagy // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007409 // axonogenesis // inferred from electronic annotation /// 0010506 // regulation of autophagy // inferred from direct assay /// 0016310 // phosphorylation // inferred from electronic annotation /// 0042594 // response to starvation // inferred from sequence or structural similarity /// 0046777 // protein autophosphorylation // inferred from direct assay","0016020 // membrane // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0034045 // pre-autophagosomal structure membrane // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr17:19674142-19771239 (-) // 85.81 // p11.2"]
["11737323_at",0.042706966,0.0040671825,-0.014983416,-0.0040671825,-0.0040671825,0.17998004,0.8002829,0.5039651,-1.0328888,-0.046684902,1.0328888,"down","LAMC2",3918.0,"0007155 // cell adhesion // inferred from electronic annotation /// 0008544 // epidermis development // traceable author statement /// 0031581 // hemidesmosome assembly // traceable author statement /// 0034329 // cell junction assembly // traceable author statement","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005604 // basement membrane // inferred from electronic annotation /// 0005607 // laminin-2 complex // inferred from electronic annotation /// 0005610 // laminin-5 complex // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005938 // cell cortex // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0008201 // heparin binding // inferred from electronic annotation","chr1:183155173-183210406 (+) // 88.09 // q25.3"]
["11738705_at",0.0044078827,-0.0044076443,0.29502726,0.08905482,-0.06008768,-0.093648195,0.70708096,0.3494972,1.0866617,0.119902864,1.0866617,"up","OR4K2",390431.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr14:20344390-20345468 (+) // 99.72 // q11.2"]
["11733177_a_at",0.21049762,-0.030463457,0.1914382,0.030463219,-0.039754868,-0.092490196,0.51504916,0.13755342,1.1155471,0.15775138,1.1155471,"up","ZNF507",22847.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:32836513-32878573 (+) // 93.4 // q13.11"]
["11729603_a_at",0.00433445,-0.0072717667,0.034895897,0.0015096664,-0.0015096664,-0.0015878677,0.75649506,0.42554858,1.007781,0.011182203,1.007781,"up","MCM7",4176.0,"0000075 // cell cycle checkpoint // traceable author statement /// 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000084 // S phase of mitotic cell cycle // traceable author statement /// 0000216 // M/G1 transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006260 // DNA replication // traceable author statement /// 0006260 // DNA replication // inferred from electronic annotation /// 0006268 // DNA unwinding involved in replication // inferred from electronic annotation /// 0006270 // DNA-dependent DNA replication initiation // inferred from electronic annotation /// 0006271 // DNA strand elongation involved in DNA replication // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from mutant phenotype /// 0007049 // cell cycle // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from electronic annotation /// 0032508 // DNA duplex unwinding // inferred from electronic annotation /// 0042325 // regulation of phosphorylation // inferred from mutant phenotype","0000785 // chromatin // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0042555 // MCM complex // inferred from direct assay /// 0042555 // MCM complex // inferred from mutant phenotype","0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003678 // DNA helicase activity // inferred from electronic annotation /// 0003697 // single-stranded DNA binding // inferred from electronic annotation /// 0004003 // ATP-dependent DNA helicase activity // inferred from direct assay /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation","chr7:99543354-99699427 (-) // 97.65 // q22.1"]
["11721036_at",-0.050941467,0.023582458,-0.034586906,-0.0019669533,0.08321571,0.0019669533,0.6298639,0.24795432,-1.0341083,-0.048387256,1.0341083,"down","SUFU",51684.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0001501 // skeletal system development // traceable author statement /// 0001843 // neural tube closure // inferred from electronic annotation /// 0001947 // heart looping // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006508 // proteolysis // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007275 // multicellular organismal development // traceable author statement /// 0007368 // determination of left/right symmetry // inferred from electronic annotation /// 0021513 // spinal cord dorsal/ventral patterning // inferred from electronic annotation /// 0042992 // negative regulation of transcription factor import into nucleus // traceable author statement /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // traceable author statement /// 0043588 // skin development // inferred from electronic annotation /// 0045668 // negative regulation of osteoblast differentiation // traceable author statement /// 0045879 // negative regulation of smoothened signaling pathway // traceable author statement /// 0045879 // negative regulation of smoothened signaling pathway // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation","0003714 // transcription corepressor activity // traceable author statement /// 0004871 // signal transducer activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008013 // beta-catenin binding // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from direct assay /// 0019901 // protein kinase binding // inferred from physical interaction","chr10:104263699-104393283 (+) // 96.23 // q24.32"]
["11753522_a_at",-0.067587376,0.033650875,-0.029398441,-0.05956459,0.1357832,0.029398441,0.75726587,0.42668903,-1.0398082,-0.056317374,1.0398082,"down","NKX3-1",4824.0,"0001655 // urogenital system development // inferred from electronic annotation /// 0001656 // metanephros development // inferred from electronic annotation /// 0001756 // somitogenesis // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0007275 // multicellular organismal development // traceable author statement /// 0007431 // salivary gland development // inferred from sequence or structural similarity /// 0007431 // salivary gland development // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0008584 // male gonad development // inferred from electronic annotation /// 0008633 // activation of pro-apoptotic gene products // inferred from direct assay /// 0010628 // positive regulation of gene expression // inferred from direct assay /// 0010628 // positive regulation of gene expression // inferred from expression pattern /// 0010628 // positive regulation of gene expression // inferred from mutant phenotype /// 0010629 // negative regulation of gene expression // inferred from expression pattern /// 0010942 // positive regulation of cell death // inferred from direct assay /// 0014068 // positive regulation of phosphatidylinositol 3-kinase cascade // inferred from direct assay /// 0030521 // androgen receptor signaling pathway // inferred from direct assay /// 0030850 // prostate gland development // inferred from electronic annotation /// 0033574 // response to testosterone stimulus // inferred from sequence or structural similarity /// 0033574 // response to testosterone stimulus // inferred from electronic annotation /// 0035690 // cellular response to drug // inferred from expression pattern /// 0035907 // dorsal aorta development // inferred from electronic annotation /// 0043280 // positive regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0043491 // protein kinase B signaling cascade // inferred from mutant phenotype /// 0043491 // protein kinase B signaling cascade // inferred from electronic annotation /// 0043569 // negative regulation of insulin-like growth factor receptor signaling pathway // inferred from sequence or structural similarity /// 0043569 // negative regulation of insulin-like growth factor receptor signaling pathway // inferred from electronic annotation /// 0045860 // positive regulation of protein kinase activity // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045930 // negative regulation of mitotic cell cycle // inferred from direct assay /// 0045931 // positive regulation of mitotic cell cycle // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0048754 // branching morphogenesis of a tube // inferred from sequence or structural similarity /// 0048754 // branching morphogenesis of a tube // inferred from electronic annotation /// 0050680 // negative regulation of epithelial cell proliferation // inferred from sequence or structural similarity /// 0050680 // negative regulation of epithelial cell proliferation // inferred from electronic annotation /// 0051781 // positive regulation of cell division // inferred from mutant phenotype /// 0060037 // pharyngeal system development // inferred from electronic annotation /// 0060442 // branching involved in prostate gland morphogenesis // inferred from sequence or structural similarity /// 0060442 // branching involved in prostate gland morphogenesis // inferred from electronic annotation /// 0060664 // epithelial cell proliferation involved in salivary gland morphogenesis // inferred from sequence or structural similarity /// 0060664 // epithelial cell proliferation involved in salivary gland morphogenesis // inferred from electronic annotation /// 0060770 // negative regulation of epithelial cell proliferation involved in prostate gland development // inferred from sequence or structural similarity /// 0060770 // negative regulation of epithelial cell proliferation involved in prostate gland development // inferred from electronic annotation /// 0071347 // cellular response to interleukin-1 // inferred from expression pattern /// 0071356 // cellular response to tumor necrosis factor // inferred from expression pattern /// 0071383 // cellular response to steroid hormone stimulus // inferred from direct assay /// 0071456 // cellular response to hypoxia // inferred from direct assay /// 0071850 // mitotic cell cycle arrest // inferred from direct assay /// 0071899 // negative regulation of estrogen receptor binding // inferred from direct assay /// 2000500 // positive regulation of induction of apoptosis in response to chemical stimulus // inferred from direct assay /// 2000836 // positive regulation of androgen secretion // inferred from direct assay /// 2001022 // positive regulation of response to DNA damage stimulus // inferred from direct assay","0005622 // intracellular // inferred from direct assay /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0000976 // transcription regulatory region sequence-specific DNA binding // inferred from direct assay /// 0000983 // RNA polymerase II core promoter sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0000988 // protein binding transcription factor activity // inferred from direct assay /// 0001047 // core promoter binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0004882 // androgen receptor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0008656 // cysteine-type endopeptidase activator activity involved in apoptotic process // inferred from direct assay /// 0030284 // estrogen receptor activity // inferred from direct assay /// 0030295 // protein kinase activator activity // inferred from direct assay /// 0030331 // estrogen receptor binding // inferred from direct assay /// 0042826 // histone deacetylase binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0043621 // protein self-association // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0097162 // MADS box domain binding // inferred from electronic annotation","chr8:23538516-23540402 (-) // 97.93 // p21.2"]
["11756834_a_at",-0.2598641,-0.0028643608,0.0028643608,0.07043648,-0.04113102,0.010568857,0.70063055,0.3405803,-1.0717087,-0.09991279,1.0717087,"down","PRKAG3",53632.0,"0005978 // glycogen biosynthetic process // inferred from electronic annotation /// 0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0007050 // cell cycle arrest // traceable author statement /// 0007243 // intracellular protein kinase cascade // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0015758 // glucose transport // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0046320 // regulation of fatty acid oxidation // traceable author statement","0005829 // cytosol // traceable author statement /// 0031588 // AMP-activated protein kinase complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004679 // AMP-activated protein kinase activity // traceable author statement /// 0004679 // AMP-activated protein kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from direct assay","chr2:219691357-219696526 (-) // 91.67 // q35"]
["11738444_at",0.13422489,-0.00919795,0.0846889,-0.028988838,0.00919795,-0.16499162,0.49622908,0.12342688,1.0954317,0.13149951,1.0954317,"up","OR51G2",81282.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr11:4935890-4936930 (-) // 100.0 // p15.4"]
["11718046_a_at",-0.2613356,0.00578022,-0.29451823,-0.00578022,0.022965431,0.03859949,0.46360224,0.10306432,-1.1502542,-0.20195279,1.1502542,"down","ITPK1",3705.0,"0007165 // signal transduction // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008152 // metabolic process // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0032957 // inositol trisphosphate metabolic process // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0003824 // catalytic activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047325 // inositol tetrakisphosphate 1-kinase activity // inferred from electronic annotation /// 0052725 // inositol-1,3,4-trisphosphate 6-kinase activity // inferred from electronic annotation /// 0052726 // inositol-1,3,4-trisphosphate 5-kinase activity // inferred from electronic annotation","chr14:93403258-93582263 (-) // 91.79 // q32.12"]
["11745878_x_at",-0.06041622,-0.046266556,-0.04593563,0.077967644,0.051148415,0.04593563,0.082850434,5.799436E-4,-1.0786474,-0.109223306,1.0786474,"down","NFKBIA",4792.0,"0000060 // protein import into nucleus, translocation // inferred from electronic annotation /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006916 // anti-apoptosis // traceable author statement /// 0007253 // cytoplasmic sequestering of NF-kappaB // inferred from mutant phenotype /// 0007253 // cytoplasmic sequestering of NF-kappaB // inferred from electronic annotation /// 0008063 // Toll signaling pathway // traceable author statement /// 0010745 // negative regulation of macrophage derived foam cell differentiation // inferred from mutant phenotype /// 0010875 // positive regulation of cholesterol efflux // inferred from mutant phenotype /// 0010888 // negative regulation of lipid storage // inferred from mutant phenotype /// 0031663 // lipopolysaccharide-mediated signaling pathway // inferred from electronic annotation /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0032270 // positive regulation of cellular protein metabolic process // inferred from mutant phenotype /// 0032481 // positive regulation of type I interferon production // traceable author statement /// 0032495 // response to muramyl dipeptide // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // inferred from electronic annotation /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042345 // regulation of NF-kappaB import into nucleus // non-traceable author statement /// 0042994 // cytoplasmic sequestering of transcription factor // inferred from direct assay /// 0042994 // cytoplasmic sequestering of transcription factor // traceable author statement /// 0043330 // response to exogenous dsRNA // inferred from electronic annotation /// 0043392 // negative regulation of DNA binding // non-traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045638 // negative regulation of myeloid cell differentiation // inferred from electronic annotation /// 0045746 // negative regulation of Notch signaling pathway // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0051092 // positive regulation of NF-kappaB transcription factor activity // traceable author statement /// 0070417 // cellular response to cold // non-traceable author statement /// 0070427 // nucleotide-binding oligomerization domain containing 1 signaling pathway // inferred from electronic annotation /// 0070431 // nucleotide-binding oligomerization domain containing 2 signaling pathway // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0033256 // I-kappaB/NF-kappaB complex // traceable author statement /// 0043234 // protein complex // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // traceable author statement /// 0008139 // nuclear localization sequence binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0031072 // heat shock protein binding // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0051059 // NF-kappaB binding // inferred from direct assay /// 0051059 // NF-kappaB binding // inferred from physical interaction","chr14:35870718-35873955 (-) // 99.74 // q13.2"]
["11753826_x_at",0.06413984,-0.044014692,0.1051898,-0.25945687,0.04401493,-0.12617564,0.57482535,0.18905166,1.1139189,0.1556442,1.1139189,"up","CTLA4",1493.0,"0006955 // immune response // inferred from electronic annotation /// 0006955 // immune response // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from mutant phenotype /// 0030889 // negative regulation of B cell proliferation // inferred from mutant phenotype /// 0031295 // T cell costimulation // traceable author statement /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0045590 // negative regulation of regulatory T cell differentiation // inferred from direct assay /// 0050853 // B cell receptor signaling pathway // inferred from mutant phenotype","0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0009897 // external side of plasma membrane // inferred from direct assay /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0045334 // clathrin-coated endocytic vesicle // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr2:204732665-204737535 (+) // 99.64 // q33.2"]
["11748873_x_at",0.052614927,0.105308294,-0.0010282993,-0.21213746,0.0010282993,-0.22513676,0.40254927,0.06766959,1.1468793,0.19771358,1.1468793,"up","CD33",945.0,"0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // non-traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0008285 // negative regulation of cell proliferation // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0009897 // external side of plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // traceable author statement /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr19:51728345-51739221 (+) // 87.92 // q13.41"]
["11716019_at",-0.0089559555,-0.048021317,-0.012212753,0.09030914,0.022418976,0.0089559555,0.43558517,0.08638781,-1.0450882,-0.063624665,1.0450882,"down","RAB31",11031.0,"0006184 // GTP catabolic process // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0048193 // Golgi vesicle transport // inferred from electronic annotation","0005769 // early endosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0005525 // GTP binding // inferred from electronic annotation","chr18:9707962-9862548 (+) // 95.84 // p11.22"]
["11715385_s_at",-0.029198647,-0.059407234,-0.003930092,0.057699203,0.003930092,0.04728222,0.34190574,0.043169785,-1.0476445,-0.06714924,1.0476445,"down","C4orf46 /// TOMM7","201725 /// 54543","0006626 // protein targeting to mitochondrion // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005742 // mitochondrial outer membrane translocase complex // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008320 // protein transmembrane transporter activity // traceable author statement /// 0015450 // P-P-bond-hydrolysis-driven protein transmembrane transporter activity // inferred from electronic annotation","chr7:22852256-22862466 (-) // 75.69 // p15.3"]
["11720315_x_at",0.036478043,-0.004998207,0.004998207,-0.044365883,-0.045791626,0.03507805,0.7135469,0.3593231,1.0213796,0.030519135,1.0213796,"up","ATP6V0B",533.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0015991 // ATP hydrolysis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport // traceable author statement /// 0015992 // proton transport // inferred from electronic annotation /// 0033572 // transferrin transport // traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0005768 // endosome // inferred from electronic annotation /// 0005773 // vacuole // inferred from electronic annotation /// 0005774 // vacuolar membrane // inferred from electronic annotation /// 0010008 // endosome membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0033177 // proton-transporting two-sector ATPase complex, proton-transporting domain // inferred from electronic annotation /// 0033179 // proton-transporting V-type ATPase, V0 domain // inferred from electronic annotation","0005215 // transporter activity // traceable author statement /// 0015078 // hydrogen ion transmembrane transporter activity // inferred from electronic annotation","chr1:44440068-44443967 (+) // 92.69 // p34.1"]
["11728330_a_at",-0.06553936,0.041679382,-0.03048706,-0.01362133,0.022807121,0.01362133,0.79080546,0.4843133,-1.0179862,-0.025717974,1.0179862,"down","MTERF",7978.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006353 // transcription termination, DNA-dependent // inferred from direct assay /// 0006353 // transcription termination, DNA-dependent // inferred from electronic annotation /// 0006353 // transcription termination, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006390 // transcription from mitochondrial promoter // traceable author statement /// 0006393 // termination of mitochondrial transcription // inferred from direct assay /// 0006393 // termination of mitochondrial transcription // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0032392 // DNA geometric change // inferred from direct assay","0005739 // mitochondrion // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement /// 0042645 // mitochondrial nucleoid // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from direct assay /// 0003690 // double-stranded DNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr7:91502020-91510034 (-) // 77.63 // q21.2"]
["11756513_a_at",0.0012311935,0.036284447,0.15772629,-0.014634132,-0.05973816,-0.0012311935,0.53063476,0.14901012,1.064578,0.09028173,1.064578,"up","SFXN5",94097.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // inferred from electronic annotation /// 0055072 // iron ion homeostasis // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation","0008324 // cation transmembrane transporter activity // inferred from electronic annotation","chr2:73171868-73298854 (-) // 96.34 // p13.2"]
["11761169_at",0.0018110275,0.12724113,-0.001811266,-0.22770119,0.16734028,-0.10992265,0.78291315,0.4704453,1.0711606,0.09917474,1.0711606,"up","ACAN",176.0,"0001501 // skeletal system development // non-traceable author statement /// 0001502 // cartilage condensation // inferred from electronic annotation /// 0001503 // ossification // inferred from electronic annotation /// 0002063 // chondrocyte development // inferred from electronic annotation /// 0006508 // proteolysis // non-traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007417 // central nervous system development // inferred from electronic annotation /// 0009314 // response to radiation // inferred from electronic annotation /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0009629 // response to gravity // inferred from electronic annotation /// 0009749 // response to glucose stimulus // inferred from electronic annotation /// 0010259 // multicellular organismal aging // inferred from electronic annotation /// 0010447 // response to acidity // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0021510 // spinal cord development // inferred from electronic annotation /// 0030166 // proteoglycan biosynthetic process // inferred from electronic annotation /// 0030199 // collagen fibril organization // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0060591 // chondroblast differentiation // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005604 // basement membrane // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from electronic annotation /// 0072534 // perineuronal net // inferred from electronic annotation","0005201 // extracellular matrix structural constituent // traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005540 // hyaluronic acid binding // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr15:89346673-89394754 (+) // 82.25 // q26.1"]
["11742170_s_at",-0.15956974,0.053973675,-0.101643085,-0.053973675,0.12155676,0.06186819,0.62588614,0.24282785,-1.0808978,-0.11223013,1.0808978,"down","CDRT15 /// CDRT15P1","146822 /// 94158","","","","chr17:13927777-13928850 (+) // 96.7 // p12 /// chr17:14139130-14140203 (-) // 97.45 // p12"]
["11718686_x_at",0.07966423,0.030033112,0.08863354,-0.030033112,-0.0971179,-0.15259743,0.23832183,0.016137682,1.1167914,0.1593597,1.1167914,"up","TXNRD2",10587.0,"0000305 // response to oxygen radical // traceable author statement /// 0007507 // heart development // inferred from electronic annotation /// 0010269 // response to selenium ion // inferred from electronic annotation /// 0030097 // hemopoiesis // inferred from electronic annotation /// 0045454 // cell redox homeostasis // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation","0004791 // thioredoxin-disulfide reductase activity // inferred from sequence or structural similarity /// 0004791 // thioredoxin-disulfide reductase activity // inferred from electronic annotation /// 0004791 // thioredoxin-disulfide reductase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016668 // oxidoreductase activity, acting on a sulfur group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0050660 // flavin adenine dinucleotide binding // inferred from electronic annotation /// 0050661 // NADP binding // inferred from electronic annotation","chr22:19863044-19929515 (-) // 95.37 // q11.21"]
["11745967_x_at",0.0043592453,-0.0043592453,0.055698395,-0.018597603,0.020391464,-0.009523392,0.7348442,0.39350414,1.0147629,0.021142649,1.0147629,"up","BCLAF1",9774.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006917 // induction of apoptosis // traceable author statement /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0043620 // regulation of DNA-dependent transcription in response to stress // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // traceable author statement /// 2000144 // positive regulation of transcription initiation, DNA-dependent // inferred from mutant phenotype /// 2001022 // positive regulation of response to DNA damage stimulus // inferred from mutant phenotype /// 2001244 // positive regulation of intrinsic apoptotic signaling pathway // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr6:136580816-136610933 (-) // 99.86 // q23.3"]
["11737810_at",-0.050685644,0.10717034,0.022514105,0.063779354,-0.022514343,-0.057150126,0.8543901,0.6149778,1.022165,0.031628013,1.022165,"up","RPS20",6224.0,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // inferred by curator /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral infectious cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0015935 // small ribosomal subunit // inferred from electronic annotation /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003723 // RNA binding // non-traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // inferred from direct assay /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0003735 // structural constituent of ribosome // inferred from electronic annotation","chr8:56985367-56987065 (-) // 79.01 // q12.1"]
["11734643_a_at",0.07329178,-0.15037203,-0.23203993,0.014596939,0.10619259,-0.014596939,0.6167138,0.23161325,-1.1007124,-0.13843758,1.1007124,"down","PLA2G4F",255189.0,"0001516 // prostaglandin biosynthetic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009395 // phospholipid catabolic process // inferred from electronic annotation /// 0015908 // fatty acid transport // inferred from electronic annotation /// 0016042 // lipid catabolic process // inferred from electronic annotation /// 0050482 // arachidonic acid secretion // inferred from electronic annotation /// 0071236 // cellular response to antibiotic // inferred from electronic annotation /// 0071407 // cellular response to organic cyclic compound // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031982 // vesicle // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from electronic annotation","0004620 // phospholipase activity // inferred from electronic annotation /// 0004622 // lysophospholipase activity // inferred from electronic annotation /// 0004623 // phospholipase A2 activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047498 // calcium-dependent phospholipase A2 activity // inferred from electronic annotation","chr15:42433398-42448821 (-) // 97.87 // q15.1"]
["11742575_at",-0.0732255,-0.0630002,0.0,0.0,0.1007781,0.14355087,0.38128227,0.058479764,-1.0919082,-0.12685159,1.0919082,"down","OR5B3",441608.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr11:58169937-58170882 (-) // 100.0 // q12.1"]
["11761013_at",0.002902031,-0.06290054,0.024617672,0.20692301,-0.002902031,-0.16332197,0.94370145,0.8295541,-1.0177336,-0.025359936,1.0177336,"down","PCNA",5111.0,"0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000083 // regulation of transcription involved in G1/S phase of mitotic cell cycle // traceable author statement /// 0000084 // S phase of mitotic cell cycle // traceable author statement /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0000278 // mitotic cell cycle // traceable author statement /// 0000722 // telomere maintenance via recombination // traceable author statement /// 0000723 // telomere maintenance // traceable author statement /// 0006260 // DNA replication // non-traceable author statement /// 0006260 // DNA replication // inferred from electronic annotation /// 0006271 // DNA strand elongation involved in DNA replication // traceable author statement /// 0006275 // regulation of DNA replication // inferred from electronic annotation /// 0006281 // DNA repair // non-traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006283 // transcription-coupled nucleotide-excision repair // traceable author statement /// 0006284 // base-excision repair // traceable author statement /// 0006287 // base-excision repair, gap-filling // inferred from electronic annotation /// 0006289 // nucleotide-excision repair // traceable author statement /// 0006297 // nucleotide-excision repair, DNA gap filling // traceable author statement /// 0006298 // mismatch repair // inferred from direct assay /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0019985 // translesion synthesis // inferred from direct assay /// 0032077 // positive regulation of deoxyribonuclease activity // inferred from direct assay /// 0032201 // telomere maintenance via semi-conservative replication // traceable author statement /// 0033993 // response to lipid // inferred from electronic annotation /// 0046686 // response to cadmium ion // inferred from electronic annotation /// 0048015 // phosphatidylinositol-mediated signaling // non-traceable author statement","0000307 // cyclin-dependent protein kinase holoenzyme complex // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005652 // nuclear lamina // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005657 // replication fork // inferred from electronic annotation /// 0005663 // DNA replication factor C complex // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0043596 // nuclear replication fork // inferred from direct assay /// 0043626 // PCNA complex // inferred from electronic annotation /// 0070557 // PCNA-p21 complex // inferred from direct assay","0000701 // purine-specific mismatch base pair DNA N-glycosylase activity // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0030337 // DNA polymerase processivity factor activity // inferred from electronic annotation /// 0030971 // receptor tyrosine kinase binding // inferred from physical interaction /// 0032139 // dinucleotide insertion or deletion binding // inferred from direct assay /// 0032405 // MutLalpha complex binding // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction","chr20:5098598-5100604 (-) // 80.58 // p13"]
["11730343_a_at",0.06594372,-0.0327425,-0.35117173,-0.31445122,0.04749918,0.0327425,0.9604939,0.8794076,-1.0195414,-0.027920336,1.0195414,"down","TSSK6",83983.0,"0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0035092 // sperm chromatin condensation // inferred from sequence or structural similarity /// 0035092 // sperm chromatin condensation // inferred from electronic annotation","","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:19623225-19627004 (-) // 90.78 // p13.11"]
["11747422_a_at",0.0052251816,-0.0025911331,0.12300491,-0.017404556,0.0025911331,-0.07856083,0.5848297,0.1983225,1.051905,0.07300447,1.051905,"up","WBSCR22",114049.0,"0008152 // metabolic process // inferred from electronic annotation /// 0032259 // methylation // non-traceable author statement /// 0032259 // methylation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0008168 // methyltransferase activity // non-traceable author statement /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr7:73097897-73112323 (+) // 93.18 // q11.23"]
["11739761_a_at",-0.1424303,-0.11482072,0.023105621,0.110358,0.012370586,-0.012370586,0.5242537,0.1445693,-1.0828508,-0.114834495,1.0828508,"down","CLDN10",9071.0,"0007155 // cell adhesion // traceable author statement /// 0016338 // calcium-independent cell-cell adhesion // inferred from sequence or structural similarity","0005886 // plasma membrane // inferred from electronic annotation /// 0005923 // tight junction // inferred from electronic annotation /// 0005923 // tight junction // inferred from sequence or structural similarity /// 0005923 // tight junction // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","0005198 // structural molecule activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from sequence or structural similarity","chr13:96085852-96232013 (+) // 88.75 // q32.1"]
["11748114_a_at",-0.020509243,0.020509243,0.07289648,-0.12114477,-0.08244276,0.040521145,0.61662817,0.23098296,1.0560325,0.07865429,1.0560325,"up","SYT12",91683.0,"0006810 // transport // inferred from electronic annotation","0008021 // synaptic vesicle // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030672 // synaptic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation","chr11:66790189-66816537 (+) // 91.69 // q13.2"]
["11728132_s_at",0.019003868,0.0030174255,-0.10506296,-0.0030174255,0.016021729,-0.020292282,0.8313836,0.5653964,-1.0176569,-0.025251275,1.0176569,"down","EXOC8",149371.0,"0006810 // transport // inferred from electronic annotation /// 0006887 // exocytosis // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0000145 // exocyst // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0030426 // growth cone // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation","chr1:231468476-231473598 (-) // 94.22 // q42.2"]
["11734303_a_at",-0.023923874,-0.012106895,-0.296463,0.058852196,0.032235146,0.012106895,0.5827877,0.19670054,-1.1059065,-0.1452294,1.1059065,"down","SPTBN4",57731.0,"0007016 // cytoskeletal anchoring at plasma membrane // traceable author statement /// 0007409 // axonogenesis // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007605 // sensory perception of sound // inferred from electronic annotation /// 0007628 // adult walking behavior // inferred from electronic annotation /// 0009566 // fertilization // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // traceable author statement /// 0019226 // transmission of nerve impulse // inferred from electronic annotation /// 0030534 // adult behavior // inferred from electronic annotation /// 0040018 // positive regulation of multicellular organism growth // inferred from electronic annotation /// 0051693 // actin filament capping // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005938 // cell cortex // inferred from electronic annotation /// 0008091 // spectrin // inferred from direct assay /// 0008091 // spectrin // inferred from electronic annotation /// 0008091 // spectrin // inferred from sequence or structural similarity /// 0016363 // nuclear matrix // inferred from direct assay /// 0016363 // nuclear matrix // inferred from sequence or structural similarity /// 0016605 // PML body // inferred from direct assay /// 0016605 // PML body // inferred from sequence or structural similarity /// 0030424 // axon // inferred from electronic annotation /// 0043194 // initial segment // inferred from sequence or structural similarity /// 0043203 // axon hillock // inferred from electronic annotation /// 0070852 // cell body fiber // inferred from electronic annotation","0003779 // actin binding // traceable author statement /// 0003779 // actin binding // inferred from electronic annotation /// 0005200 // structural constituent of cytoskeleton // traceable author statement /// 0005200 // structural constituent of cytoskeleton // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0030506 // ankyrin binding // inferred from direct assay /// 0030506 // ankyrin binding // inferred from sequence or structural similarity","chr19:40973049-41082365 (+) // 96.72 // q13.2"]
["11751470_a_at",0.011292458,0.15396953,-0.11979771,-0.09420872,-0.011292696,0.0875051,0.94536346,0.83454955,1.0147705,0.021153497,1.0147705,"up","PLEKHS1",79949.0,"","","0005543 // phospholipid binding // inferred from electronic annotation","chr10:115535213-115541284 (+) // 81.18 // q25.3"]
["11760186_at",-0.027587652,-0.13845968,0.027587652,-0.19034791,0.07279897,0.112231016,0.8907867,0.6990318,-1.0312403,-0.04438061,1.0312403,"down","ACTA2",59.0,"0006936 // muscle contraction // traceable author statement /// 0008217 // regulation of blood pressure // inferred from electronic annotation /// 0009615 // response to virus // inferred from expression pattern /// 0014829 // vascular smooth muscle contraction // inferred from electronic annotation /// 0072144 // glomerular mesangial cell development // inferred from expression pattern","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0030485 // smooth muscle contractile fiber // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation","chr10:90702370-90751092 (-) // 76.3 // q23.31"]
["11737467_at",-0.013745785,0.05438757,0.17235112,-0.013355017,-0.006363392,0.006363392,0.6228675,0.23964302,1.0536891,0.07544928,1.0536891,"up","TMCO5A",145942.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr15:38225453-38243622 (+) // 88.29 // q14"]
["11758100_s_at",-0.08084059,-0.013599396,-0.029479504,0.013599396,0.14377928,0.06836414,0.3684316,0.05297232,-1.0841423,-0.11655416,1.0841423,"down","C1S",716.0,"0006508 // proteolysis // inferred from electronic annotation /// 0006956 // complement activation // traceable author statement /// 0006956 // complement activation // inferred from electronic annotation /// 0006958 // complement activation, classical pathway // traceable author statement /// 0006958 // complement activation, classical pathway // inferred from electronic annotation /// 0010001 // glial cell differentiation // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation /// 0051591 // response to cAMP // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from direct assay /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:7177383-7178293 (+) // 95.06 // p13.31"]
["11721478_a_at",-0.0025773048,0.04728985,-0.062078,0.15039349,-0.031533718,0.0025773048,0.8033276,0.5107339,-1.03259,-0.046267577,1.03259,"down","GOLPH3L",55204.0,"","0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation","0008289 // lipid binding // inferred from electronic annotation","chr1:150618705-150669672 (-) // 89.53 // q21.3"]
["11753166_a_at",-0.16026688,-0.017203808,-0.016033173,0.120592594,0.016033173,0.023234844,0.48370215,0.114631385,-1.08507,-0.117788136,1.08507,"down","WDR6",11180.0,"0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0010507 // negative regulation of autophagy // inferred from mutant phenotype","0005625 // soluble fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0008180 // signalosome // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0043560 // insulin receptor substrate binding // inferred from electronic annotation","chr3:49044822-49050783 (+) // 100.0 // p21.31"]
["11751917_a_at",0.06817436,0.10770035,0.11048412,-0.12906504,-0.06817484,-0.12541676,0.09209852,0.0010683764,1.1510936,0.20300515,1.1510936,"up","MTMR12",54545.0,"0016311 // dephosphorylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0016791 // phosphatase activity // inferred from electronic annotation","chr5:32227114-32313044 (-) // 91.05 // p13.3"]
["11721076_at",-0.024571419,0.0037622452,-0.092990875,-1.6212463E-4,1.6212463E-4,0.03752041,0.5681526,0.18262088,-1.0355809,-0.050440226,1.0355809,"down","MTCH2",23788.0,"0006810 // transport // inferred from electronic annotation","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr11:47638863-47664221 (-) // 89.45 // p11.2"]
["11756901_a_at",0.14301443,0.0096952915,-0.10207987,-0.03292346,0.009509087,-0.009509325,0.89982146,0.7182126,1.0194925,0.027851172,1.0194925,"up","MASP1",5648.0,"0001867 // complement activation, lectin pathway // inferred from electronic annotation /// 0001867 // complement activation, lectin pathway // inferred from mutant phenotype /// 0001867 // complement activation, lectin pathway // traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0006956 // complement activation // traceable author statement /// 0006956 // complement activation // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation /// 0045916 // negative regulation of complement activation // inferred from direct assay","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from direct assay /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from direct assay /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from direct assay /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0048306 // calcium-dependent protein binding // inferred from physical interaction","chr3:186951873-187009525 (-) // 89.2 // q27.3"]
["11748464_a_at",-0.013698101,0.013698101,-0.27251482,-0.25462246,0.1277709,0.024262428,0.8997866,0.7180441,-1.040042,-0.056641847,1.040042,"down","CORIN",10699.0,"0003050 // regulation of systemic arterial blood pressure by atrial natriuretic peptide // inferred from mutant phenotype /// 0003050 // regulation of systemic arterial blood pressure by atrial natriuretic peptide // inferred from sequence or structural similarity /// 0003050 // regulation of systemic arterial blood pressure by atrial natriuretic peptide // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0007565 // female pregnancy // inferred from mutant phenotype /// 0008217 // regulation of blood pressure // inferred from sequence or structural similarity /// 0016486 // peptide hormone processing // inferred from direct assay /// 0016486 // peptide hormone processing // inferred from electronic annotation /// 0035813 // regulation of renal sodium excretion // inferred from sequence or structural similarity","0005576 // extracellular region // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from direct assay /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0005044 // scavenger receptor activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0070008 // serine-type exopeptidase activity // inferred from electronic annotation","chr4:47644859-47840123 (-) // 99.96 // p12"]
["11737680_at",-0.03791094,0.52878046,0.0379107,0.075110435,-0.042835236,-0.04698968,0.7236883,0.37603596,1.133799,0.18116485,1.133799,"up","GPR149",344758.0,"0001546 // preantral ovarian follicle growth // inferred from electronic annotation /// 0001547 // antral ovarian follicle growth // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0060206 // estrous cycle phase // inferred from electronic annotation /// 0060280 // negative regulation of ovulation // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation","chr3:154055149-154147504 (-) // 100.0 // q25.2"]
["11735288_x_at",-0.089487076,0.028572083,-0.03708172,-0.028572083,0.04976034,0.15300703,0.6073535,0.22142667,-1.0649093,-0.09073061,1.0649093,"down","AP4S1",11154.0,"0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0005794 // Golgi apparatus // inferred from electronic annotation /// 0005905 // coated pit // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005215 // transporter activity // traceable author statement /// 0008565 // protein transporter activity // inferred from electronic annotation","chr14:31494675-31555007 (+) // 82.19 // q12"]
["11733460_x_at",-0.006696701,0.15925932,0.006696701,-0.060081005,0.07147169,-0.16858292,0.6667159,0.29426613,1.0758551,0.10548383,1.0758551,"up","PSG6",5675.0,"0007565 // female pregnancy // non-traceable author statement /// 0007565 // female pregnancy // traceable author statement","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation","","chr19:43406236-43422003 (-) // 52.47 // q13.31"]
["11763441_a_at",0.009010315,0.05647087,-0.24626708,0.04084778,-0.16114235,-0.009010315,0.96288353,0.88557214,-1.0119656,-0.017160295,1.0119656,"down","WNK4",65266.0,"0006468 // protein phosphorylation // inferred from sequence or structural similarity /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006811 // ion transport // inferred from sequence or structural similarity /// 0006811 // ion transport // inferred from electronic annotation /// 0006821 // chloride transport // inferred from electronic annotation /// 0007243 // intracellular protein kinase cascade // inferred from sequence or structural similarity /// 0008104 // protein localization // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0050794 // regulation of cellular process // inferred from sequence or structural similarity /// 0050794 // regulation of cellular process // inferred from electronic annotation /// 0090188 // negative regulation of pancreatic juice secretion // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005923 // tight junction // inferred from sequence or structural similarity /// 0005923 // tight junction // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from sequence or structural similarity /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from sequence or structural similarity /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr17:40935626-40948175 (+) // 89.21 // q21.31"]
["11735405_x_at",-0.124751806,0.0866034,-0.27220917,0.061549187,-0.004279852,0.0042800903,0.6763063,0.30775186,-1.0897287,-0.12396902,1.0897287,"down","ANKS1B",56899.0,"","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0015030 // Cajal body // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0046875 // ephrin receptor binding // inferred from physical interaction","chr12:99129070-100378510 (-) // 97.36 // q23.1"]
["11720052_s_at",0.052908897,0.06683731,0.07514095,-0.052908897,-0.09328747,-0.059519768,0.08459432,6.908917E-4,1.0969778,0.13353437,1.0969778,"up","EMG1",10436.0,"0006364 // rRNA processing // inferred from sequence or structural similarity /// 0006364 // rRNA processing // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation /// 0042254 // ribosome biogenesis // inferred from electronic annotation /// 0042274 // ribosomal small subunit biogenesis // inferred from sequence or structural similarity","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from sequence or structural similarity /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity","0003723 // RNA binding // inferred from sequence or structural similarity /// 0003723 // RNA binding // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0019843 // rRNA binding // inferred from electronic annotation /// 0070037 // rRNA (pseudouridine) methyltransferase activity // inferred from direct assay","chr12:7079943-7085139 (+) // 97.12 // p13.31"]
["11745442_x_at",0.023165703,0.009803772,0.08869648,-0.013669014,-0.009803772,-0.049266815,0.42080393,0.077405095,1.0459412,0.0648018,1.0459412,"up","ACTR2",10097.0,"0006928 // cellular component movement // traceable author statement /// 0007163 // establishment or maintenance of cell polarity // inferred from electronic annotation /// 0008356 // asymmetric cell division // inferred from electronic annotation /// 0016482 // cytoplasmic transport // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0033206 // cytokinesis after meiosis // inferred from electronic annotation /// 0051321 // meiotic cell cycle // inferred from electronic annotation /// 0051653 // spindle localization // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005885 // Arp2/3 protein complex // inferred from reviewed computational analysis /// 0005885 // Arp2/3 protein complex // traceable author statement /// 0005938 // cell cortex // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement /// 0030478 // actin cap // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003779 // actin binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation","chr2:65455309-65496361 (+) // 94.96 // p14"]
["11744956_a_at",0.0040812492,0.16532564,0.06003332,-0.13524675,-0.0040812492,-0.027522564,0.45959622,0.10080505,1.0958854,0.13209693,1.0958854,"up","PBRM1",55193.0,"0001890 // placenta development // inferred from electronic annotation /// 0006338 // chromatin remodeling // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007067 // mitosis // traceable author statement /// 0007507 // heart development // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0016568 // chromatin modification // inferred from electronic annotation","0000228 // nuclear chromosome // non-traceable author statement /// 0000776 // kinetochore // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // non-traceable author statement /// 0003682 // chromatin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr3:52581857-52713740 (-) // 97.4 // p21.1"]
["11741670_x_at",-0.025349855,-0.05607009,0.025349855,0.15881562,-0.046307802,0.19007874,0.5855838,0.1993913,-1.0863976,-0.11955226,1.0863976,"down","ESR2",2100.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0001541 // ovarian follicle development // inferred from electronic annotation /// 0001764 // neuron migration // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0007420 // brain development // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0030308 // negative regulation of cell growth // non-traceable author statement /// 0030520 // intracellular estrogen receptor signaling pathway // traceable author statement /// 0030520 // intracellular estrogen receptor signaling pathway // inferred from electronic annotation /// 0030522 // intracellular receptor mediated signaling pathway // non-traceable author statement /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043401 // steroid hormone mediated signaling pathway // traceable author statement /// 0043401 // steroid hormone mediated signaling pathway // inferred from electronic annotation /// 0050680 // negative regulation of epithelial cell proliferation // inferred from electronic annotation /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0060065 // uterus development // inferred from electronic annotation /// 0060068 // vagina development // inferred from electronic annotation /// 0060740 // prostate gland epithelium morphogenesis // inferred from electronic annotation /// 0060743 // epithelial cell maturation involved in prostate gland development // inferred from electronic annotation /// 0060766 // negative regulation of androgen receptor signaling pathway // inferred from electronic annotation /// 1900116 // extracellular negative regulation of signal transduction // non-traceable author statement","0005576 // extracellular region // non-traceable author statement /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005739 // mitochondrion // inferred from direct assay","0001046 // core promoter sequence-specific DNA binding // inferred from direct assay /// 0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003707 // steroid hormone receptor activity // traceable author statement /// 0003707 // steroid hormone receptor activity // inferred from electronic annotation /// 0003713 // transcription coactivator activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0004879 // ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity // non-traceable author statement /// 0005496 // steroid binding // traceable author statement /// 0005496 // steroid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0030284 // estrogen receptor activity // traceable author statement /// 0034056 // estrogen response element binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0048019 // receptor antagonist activity // non-traceable author statement","chr14:64693752-64805268 (-) // 99.38 // q23.2"]
["11758265_s_at",-0.009783745,-0.14349556,0.008036137,-0.008036613,0.0142121315,0.17359114,0.6060302,0.21983702,-1.0779847,-0.10833669,1.0779847,"down","KIAA1468",57614.0,"","","","chr18:59973628-59974346 (+) // 93.36 // q21.33"]
["11741193_a_at",-0.09992695,-0.07730007,-0.19546604,0.1203537,0.18280125,0.07730007,0.16627178,0.0061141755,-1.1900724,-0.25104937,1.1900724,"down","ACP2",53.0,"0001501 // skeletal system development // inferred from electronic annotation /// 0007040 // lysosome organization // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0048102 // autophagic cell death // inferred from electronic annotation","0005764 // lysosome // inferred from direct assay /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0019717 // synaptosome // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043202 // lysosomal lumen // inferred from electronic annotation","0001784 // phosphotyrosine binding // inferred from electronic annotation /// 0003993 // acid phosphatase activity // inferred from electronic annotation /// 0003993 // acid phosphatase activity // traceable author statement /// 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr11:47267069-47270457 (-) // 100.0 // p11.2"]
["11727801_a_at",0.0019087791,-0.0019087791,-0.19063997,-0.008806229,0.01120472,0.05796957,0.6521197,0.27715868,-1.0597099,-0.08366938,1.0597099,"down","POP4",10775.0,"0006364 // rRNA processing // inferred from electronic annotation /// 0006364 // rRNA processing // traceable author statement /// 0006379 // mRNA cleavage // inferred from electronic annotation /// 0008033 // tRNA processing // inferred from electronic annotation /// 0008033 // tRNA processing // traceable author statement","0000172 // ribonuclease MRP complex // inferred from electronic annotation /// 0000172 // ribonuclease MRP complex // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005655 // nucleolar ribonuclease P complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0030677 // ribonuclease P complex // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0004526 // ribonuclease P activity // inferred from electronic annotation /// 0004526 // ribonuclease P activity // traceable author statement /// 0004540 // ribonuclease activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation","chr19:30097227-30108157 (+) // 82.41 // q12"]
["11715937_a_at",-0.016550064,0.022729874,0.14044285,-0.001994133,0.001994133,-0.08324909,0.6186838,0.23414125,1.0545474,0.07662398,1.0545474,"up","KHDRBS1",10657.0,"0000086 // G2/M transition of mitotic cell cycle // inferred from sequence or structural similarity /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006397 // mRNA processing // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007166 // cell surface receptor signaling pathway // inferred from direct assay /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0046831 // regulation of RNA export from nucleus // inferred from sequence or structural similarity /// 0046831 // regulation of RNA export from nucleus // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation","0003677 // DNA binding // traceable author statement /// 0003723 // RNA binding // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0005070 // SH3/SH2 adaptor activity // inferred from physical interaction /// 0005070 // SH3/SH2 adaptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0017124 // SH3 domain binding // inferred from electronic annotation","chr1:32479294-32509483 (+) // 94.54 // p35.1"]
["11725618_a_at",-0.022045374,-0.0068264008,0.024583578,0.019993067,-0.08219886,0.0068264008,0.87047976,0.6511809,1.0118746,0.017030448,1.0118746,"up","GAD1",2571.0,"0006538 // glutamate catabolic process // traceable author statement /// 0006540 // glutamate decarboxylation to succinate // traceable author statement /// 0006540 // glutamate decarboxylation to succinate // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007269 // neurotransmitter secretion // traceable author statement /// 0018352 // protein-pyridoxal-5-phosphate linkage // traceable author statement /// 0019752 // carboxylic acid metabolic process // inferred from electronic annotation /// 0042136 // neurotransmitter biosynthetic process // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005622 // intracellular // inferred from direct assay /// 0005622 // intracellular // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0012506 // vesicle membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030672 // synaptic vesicle membrane // inferred from electronic annotation /// 0031225 // anchored to membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0042734 // presynaptic membrane // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0061202 // clathrin sculpted gamma-aminobutyric acid transport vesicle membrane // traceable author statement","0003824 // catalytic activity // inferred from electronic annotation /// 0004351 // glutamate decarboxylase activity // inferred from direct assay /// 0004351 // glutamate decarboxylase activity // inferred from electronic annotation /// 0004351 // glutamate decarboxylase activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0016829 // lyase activity // inferred from electronic annotation /// 0016831 // carboxy-lyase activity // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation","chr2:171673062-171717657 (+) // 97.87 // q31.1"]
["11744858_a_at",0.07826662,-0.10429382,-0.019548416,0.06831312,-0.12294626,0.019548416,0.9898109,0.96636313,-1.0024269,-0.0034969812,1.0024269,"down","LHPP",64077.0,"0006470 // protein dephosphorylation // inferred from sequence or structural similarity /// 0006796 // phosphate-containing compound metabolic process // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay","0000287 // magnesium ion binding // inferred from sequence or structural similarity /// 0004427 // inorganic diphosphatase activity // inferred from direct assay /// 0004427 // inorganic diphosphatase activity // inferred from electronic annotation /// 0008969 // phosphohistidine phosphatase activity // inferred from sequence or structural similarity /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr10:126150388-126302710 (+) // 83.74 // q26.13"]
["11728240_s_at",0.018921137,-0.05183339,-0.27373624,-0.004985094,0.28510547,0.004985094,0.5894934,0.20283489,-1.1465119,-0.19725133,1.1465119,"down","RRAGD",58528.0,"0032008 // positive regulation of TOR signaling cascade // non-traceable author statement /// 0034613 // cellular protein localization // inferred from sequence or structural similarity /// 0071230 // cellular response to amino acid stimulus // inferred from sequence or structural similarity","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005764 // lysosome // inferred from direct assay /// 0005764 // lysosome // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from physical interaction","chr6:90074040-90122189 (-) // 90.49 // q15"]
["11734385_a_at",0.1686945,-0.03327799,0.21735334,-0.07026672,-0.17625809,0.03327799,0.49900088,0.125669,1.1397142,0.18867214,1.1397142,"up","PROCA1",147011.0,"0016042 // lipid catabolic process // inferred from electronic annotation","","0004623 // phospholipase A2 activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation","chr17:27030533-27038868 (-) // 92.03 // q11.2"]
["11736961_at",-0.11450243,-0.04776144,-0.05863762,0.15429401,0.047761917,0.087440014,0.20029292,0.010360328,-1.1251618,-0.17013243,1.1251618,"down","ZNF365",22891.0,"","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation","chr10:64133915-64240047 (+) // 92.35 // q21.2"]
["11756066_a_at",-0.1448474,0.014400005,0.08061075,0.10760021,-0.014400005,-0.014400005,0.8535117,0.6130528,-1.0301675,-0.042878874,1.0301675,"down","LRRC23",10233.0,"","","","chr12:7014004-7015795 (+) // 100.0 // p13.31"]
["11755001_a_at",-0.18955493,0.057008266,0.07655549,-0.057008028,0.20315981,-0.05978203,0.899722,0.71757203,-1.0334393,-0.047453623,1.0334393,"down","ARHGAP32",9743.0,"0007154 // cell communication // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0000139 // Golgi membrane // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005938 // cell cortex // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation","chr11:128838658-129034323 (-) // 97.09 // q24.3"]
["11721040_a_at",-0.09680891,-0.0775156,0.012116432,0.0024409294,0.025960922,-0.0024409294,0.5244825,0.14482066,-1.0444353,-0.06272307,1.0444353,"down","TRAPPC11",60684.0,"0006810 // transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation","0005794 // Golgi apparatus // inferred from electronic annotation","","chr4:184580441-184634745 (+) // 98.03 // q35.1"]
["11760030_x_at",-0.23491621,-0.017026901,-0.40126085,0.06644964,0.15989065,0.017026901,0.3980531,0.06577405,-1.2301694,-0.298857,1.2301694,"down","WDR90",197335.0,"","","","chr16:699324-706201 (+) // 99.41 // p13.3"]
["11744964_a_at",0.060204506,0.04464197,0.12601614,-0.20959187,-0.04464197,-0.13574648,0.24967015,0.0183885,1.1542436,0.20694771,1.1542436,"up","MIR17HG /// MIR18A /// MIR19A /// MIR19B1 /// MIR20A /// MIR92A1","406953 /// 406979 /// 406980 /// 406982 /// 407048 /// 407975","","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr13:92000073-92006829 (+) // 92.06 // q31.3"]
["11735821_s_at",0.11729336,-0.066122055,-0.16037941,-0.09425545,0.07355595,0.066122055,0.8599322,0.6273974,-1.0363731,-0.051543526,1.0363731,"down","AQP12A /// AQP12B","375318 /// 653437","0006810 // transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0046930 // pore complex // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation /// 0015288 // porin activity // inferred from electronic annotation","chr2:241631267-241637896 (+) // 96.58 // q37.3 /// chr2:241615838-241622317 (-) // 97.45 // q37.3"]
["11756074_a_at",0.12219334,-0.007727146,-0.09136438,0.03023386,-0.19552612,0.007727146,0.829089,0.5603631,1.0426264,0.060222268,1.0426264,"up","MMP7",4316.0,"0002779 // antibacterial peptide secretion // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0006508 // proteolysis // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0030574 // collagen catabolic process // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042742 // defense response to bacterium // inferred from electronic annotation /// 0050829 // defense response to Gram-negative bacterium // inferred from electronic annotation /// 0050830 // defense response to Gram-positive bacterium // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0031012 // extracellular matrix // inferred from electronic annotation","0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0004222 // metalloendopeptidase activity // traceable author statement /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:102395706-102398327 (-) // 100.0 // q22.2"]
["11754737_a_at",-0.017438412,0.02039051,-0.124284744,0.028499603,0.017437935,-0.060439587,0.8130416,0.52786607,-1.0249902,-0.035610117,1.0249902,"down","ZNF41",7592.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chrX:47306100-47309644 (-) // 92.72 // p11.23"]
["11746008_x_at",0.24689388,0.17219019,-0.043112278,-0.056908607,-0.07925463,0.043112278,0.55949324,0.17419718,1.114457,0.15634097,1.114457,"up","NEXN",91624.0,"0030334 // regulation of cell migration // inferred from direct assay /// 0030334 // regulation of cell migration // inferred from electronic annotation /// 0051493 // regulation of cytoskeleton organization // inferred from expression pattern","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005912 // adherens junction // inferred from electronic annotation /// 0005924 // cell-substrate adherens junction // inferred from electronic annotation /// 0030018 // Z disc // inferred from sequence or structural similarity /// 0030018 // Z disc // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0008307 // structural constituent of muscle // inferred from mutant phenotype /// 0051015 // actin filament binding // inferred from direct assay /// 0051015 // actin filament binding // inferred from electronic annotation","chr1:78354281-78408907 (+) // 93.37 // p31.1"]
["11742186_a_at",0.026782751,0.09677172,-0.15134978,0.1127131,-0.026782751,-0.12723875,0.9898109,0.9667195,1.0031271,0.0045044096,1.0031271,"up","TMOD2",29767.0,"0007270 // neuron-neuron synaptic transmission // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0007611 // learning or memory // inferred from electronic annotation /// 0045745 // positive regulation of G-protein coupled receptor protein signaling pathway // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0030426 // growth cone // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0005523 // tropomyosin binding // inferred from electronic annotation /// 0005523 // tropomyosin binding // traceable author statement","chr15:52043757-52108556 (+) // 83.39 // q21.2"]
["11729283_a_at",-0.04985428,0.09954882,0.119048595,-0.20345354,0.04985428,-0.09547138,0.5856111,0.19957441,1.1013486,0.13927123,1.1013486,"up","MEF2B /// MEF2BNB /// MEF2BNB-MEF2B","100271849 /// 4207 /// 729991","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007507 // heart development // inferred from expression pattern /// 0007517 // muscle organ development // traceable author statement","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0042826 // histone deacetylase binding // inferred from physical interaction /// 0046983 // protein dimerization activity // inferred from electronic annotation","chr19:19256375-19281098 (-) // 95.2 // p13.11"]
["11721053_s_at",-0.049342155,-0.08759117,0.028785706,0.03062725,0.02037716,-0.02037716,0.66017437,0.2862454,-1.0325834,-0.04625825,1.0325834,"down","KLHDC5",57542.0,"","","","chr12:27932813-27955972 (+) // 90.33 // p11.22"]
["11730370_a_at",0.0066404343,-0.057254076,0.06132984,-0.006640196,-0.1287198,0.20958233,0.9504583,0.84961015,-1.0147812,-0.02116875,1.0147812,"down","EIF4E3",317649.0,"0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005845 // mRNA cap binding complex // inferred from sequence or structural similarity","0003723 // RNA binding // inferred from electronic annotation /// 0003743 // translation initiation factor activity // inferred from electronic annotation","chr3:71728271-71803924 (-) // 86.94 // p13"]
["11721980_a_at",-0.013727188,-0.20394707,0.15620756,0.013727188,0.15194416,-0.2606554,0.9847724,0.9476028,1.0077742,0.011172476,1.0077742,"up","SLC36A1",206358.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006865 // amino acid transport // traceable author statement /// 0006865 // amino acid transport // inferred from electronic annotation /// 0015804 // neutral amino acid transport // inferred from electronic annotation /// 0015808 // L-alanine transport // inferred from electronic annotation /// 0015816 // glycine transport // inferred from electronic annotation /// 0015824 // proline transport // inferred from electronic annotation /// 0015992 // proton transport // inferred from electronic annotation /// 0035524 // proline transmembrane transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement","0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0015078 // hydrogen ion transmembrane transporter activity // inferred from electronic annotation /// 0015175 // neutral amino acid transmembrane transporter activity // inferred from electronic annotation /// 0015180 // L-alanine transmembrane transporter activity // inferred from electronic annotation /// 0015187 // glycine transmembrane transporter activity // inferred from electronic annotation /// 0015193 // L-proline transmembrane transporter activity // inferred from electronic annotation /// 0015293 // symporter activity // inferred from electronic annotation","chr5:150827156-150871940 (+) // 97.93 // q33.1"]
["11756189_x_at",0.021970749,-0.021970749,-0.03455019,0.13386154,0.041572094,-0.053861618,0.74707997,0.41167668,-1.0367304,-0.052040786,1.0367304,"down","SAMD10",140700.0,"","","","chr20:62605467-62611382 (-) // 98.12 // q13.33"]
["11732852_a_at",-0.21124029,-0.07462597,-0.008183479,0.11975098,0.009201288,0.008183479,0.47592866,0.11040928,-1.1047566,-0.14372854,1.1047566,"down","ATP1B4",23439.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0015672 // monovalent inorganic cation transport // inferred from direct assay /// 0015672 // monovalent inorganic cation transport // traceable author statement /// 0046034 // ATP metabolic process // inferred from electronic annotation","0000785 // chromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005637 // nuclear inner membrane // inferred from direct assay /// 0005637 // nuclear inner membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005391 // sodium:potassium-exchanging ATPase activity // inferred from electronic annotation /// 0015077 // monovalent inorganic cation transmembrane transporter activity // traceable author statement","chrX:119495939-119517168 (+) // 73.84 // q24"]
["11738735_at",0.043011665,-0.043011665,-0.21218014,0.17432618,0.052102566,-0.1253767,0.74861705,0.41469097,-1.0750552,-0.10441079,1.0750552,"down","VN1R4",317703.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0019236 // response to pheromone // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0016503 // pheromone receptor activity // inferred from electronic annotation","chr19:53769928-53770976 (-) // 100.0 // q13.42"]
["11743452_s_at",-4.930496E-4,4.930496E-4,-0.010615349,0.006641388,-0.049593925,0.056671143,0.9355958,0.80588794,-1.0056381,-0.008111247,1.0056381,"down","CDCA4",55038.0,"0051301 // cell division // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","","chr14:105475909-105487425 (-) // 99.84 // q32.33"]
["11752778_a_at",-0.010543346,-0.10107803,0.0017023087,0.08399248,0.14579058,-0.0017023087,0.4643318,0.10369063,-1.0812249,-0.11266667,1.0812249,"down","TTC31",64427.0,"","","","chr2:74710213-74720210 (+) // 100.0 // p13.1"]
["11723217_x_at",0.024918556,0.009967804,0.02836895,-0.020993233,-0.05317974,-0.009967804,0.28134462,0.025473949,1.0346422,0.049131967,1.0346422,"up","SFXN3",81855.0,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0055072 // iron ion homeostasis // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003713 // transcription coactivator activity // traceable author statement /// 0008324 // cation transmembrane transporter activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr10:102790962-102800998 (+) // 88.67 // q24.31"]
["11721681_a_at",-0.009841442,0.047220707,0.08978319,-0.0059928894,-0.049179077,0.0059928894,0.5350946,0.15296338,1.041585,0.058780532,1.041585,"up","RBMX2",51634.0,"","","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation","chrX:129535951-129547628 (+) // 83.86 // q26.1"]
["11749696_a_at",0.16000485,0.025441647,0.041497946,-0.08053899,-0.025441885,-0.05014825,0.356088,0.047963135,1.0925438,0.12769116,1.0925438,"up","PCDH8",5100.0,"0001756 // somitogenesis // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from electronic annotation /// 0007267 // cell-cell signaling // traceable author statement /// 0007268 // synaptic transmission // inferred from electronic annotation /// 0016331 // morphogenesis of embryonic epithelium // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0042734 // presynaptic membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr13:53418274-53422775 (-) // 97.39 // q14.3"]
["11725541_a_at",0.01679802,0.14198685,-0.14207268,-0.01679802,-0.027654171,0.11291742,0.95514065,0.86300087,-1.0120293,-0.017251045,1.0120293,"down","GATA4",2626.0,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0001702 // gastrulation with mouth forming second // inferred from electronic annotation /// 0001706 // endoderm formation // inferred from electronic annotation /// 0001947 // heart looping // inferred from sequence or structural similarity /// 0003181 // atrioventricular valve morphogenesis // inferred from electronic annotation /// 0003197 // endocardial cushion development // inferred from sequence or structural similarity /// 0003197 // endocardial cushion development // inferred from electronic annotation /// 0003208 // cardiac ventricle morphogenesis // traceable author statement /// 0003215 // cardiac right ventricle morphogenesis // inferred from sequence or structural similarity /// 0003229 // ventricular cardiac muscle tissue development // inferred from electronic annotation /// 0003281 // ventricular septum development // inferred from sequence or structural similarity /// 0003289 // atrial septum primum morphogenesis // inferred from sequence or structural similarity /// 0003290 // atrial septum secundum morphogenesis // inferred from mutant phenotype /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0007267 // cell-cell signaling // inferred from sequence or structural similarity /// 0007267 // cell-cell signaling // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0007492 // endoderm development // traceable author statement /// 0007507 // heart development // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008584 // male gonad development // inferred from expression pattern /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0010575 // positive regulation vascular endothelial growth factor production // inferred from sequence or structural similarity /// 0023019 // signal transduction involved in regulation of gene expression // inferred from electronic annotation /// 0030509 // BMP signaling pathway // inferred from electronic annotation /// 0030513 // positive regulation of BMP signaling pathway // inferred from electronic annotation /// 0035050 // embryonic heart tube development // inferred from electronic annotation /// 0035054 // embryonic heart tube anterior/posterior pattern specification // inferred from sequence or structural similarity /// 0035054 // embryonic heart tube anterior/posterior pattern specification // inferred from electronic annotation /// 0035239 // tube morphogenesis // inferred from electronic annotation /// 0042493 // response to drug // inferred from mutant phenotype /// 0043627 // response to estrogen stimulus // inferred from electronic annotation /// 0045766 // positive regulation of angiogenesis // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048557 // embryonic digestive tract morphogenesis // inferred from electronic annotation /// 0048598 // embryonic morphogenesis // inferred from electronic annotation /// 0048617 // embryonic foregut morphogenesis // inferred from sequence or structural similarity /// 0048617 // embryonic foregut morphogenesis // inferred from electronic annotation /// 0051891 // positive regulation of cardioblast differentiation // inferred from sequence or structural similarity /// 0055007 // cardiac muscle cell differentiation // inferred from expression pattern /// 0055007 // cardiac muscle cell differentiation // inferred from electronic annotation /// 0060008 // Sertoli cell differentiation // inferred from electronic annotation /// 0060043 // regulation of cardiac muscle cell proliferation // inferred from electronic annotation /// 0060045 // positive regulation of cardiac muscle cell proliferation // inferred from electronic annotation /// 0060070 // canonical Wnt receptor signaling pathway // inferred from electronic annotation /// 0060395 // SMAD protein signal transduction // inferred from electronic annotation /// 0060413 // atrial septum morphogenesis // inferred from mutant phenotype /// 0060464 // lung lobe formation // inferred from electronic annotation /// 0060575 // intestinal epithelial cell differentiation // inferred from direct assay /// 0071371 // cellular response to gonadotropin stimulus // inferred from electronic annotation /// 0071372 // cellular response to follicle-stimulating hormone stimulus // inferred from electronic annotation /// 0072148 // epithelial cell fate commitment // inferred from electronic annotation /// 0072520 // seminiferous tubule development // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0000977 // RNA polymerase II regulatory region sequence-specific DNA binding // inferred from electronic annotation /// 0000981 // sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from electronic annotation /// 0003677 // DNA binding // inferred from sequence or structural similarity /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0033613 // activating transcription factor binding // inferred from sequence or structural similarity /// 0033613 // activating transcription factor binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from sequence or structural similarity /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:11561735-11617507 (+) // 95.94 // p23.1"]
["11748666_a_at",-0.04165411,-0.16880941,0.10717964,0.06396866,0.04165411,-0.0794425,0.87550586,0.66126716,-1.0303644,-0.043154646,1.0303644,"down","ZNF558",148156.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:8921947-8942984 (-) // 82.01 // p13.2"]
["11757863_x_at",-0.027213097,-0.021557808,-0.0039167404,0.02295971,0.0039167404,0.043985367,0.32800695,0.03827578,-1.0289574,-0.041183207,1.0289574,"down","C9orf123",90871.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr9:7798346-7799501 (-) // 90.66 // p24.1"]
["11746013_s_at",-0.14562201,0.08618164,-0.019417048,-0.29554915,0.04079199,0.01941681,0.89353585,0.7038845,1.0368168,0.05216105,1.0368168,"up","NCF1 /// NCF1B /// NCF1C","653361 /// 654816 /// 654817","0001878 // response to yeast // inferred from electronic annotation /// 0001909 // leukocyte mediated cytotoxicity // inferred from electronic annotation /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0002679 // respiratory burst involved in defense response // inferred from electronic annotation /// 0006184 // GTP catabolic process // traceable author statement /// 0006612 // protein targeting to membrane // inferred from direct assay /// 0006691 // leukotriene metabolic process // inferred from electronic annotation /// 0006801 // superoxide metabolic process // traceable author statement /// 0006954 // inflammatory response // inferred from electronic annotation /// 0006968 // cellular defense response // inferred from electronic annotation /// 0006968 // cellular defense response // traceable author statement /// 0007154 // cell communication // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from electronic annotation /// 0009617 // response to bacterium // inferred from electronic annotation /// 0042554 // superoxide anion generation // inferred from electronic annotation /// 0042554 // superoxide anion generation // traceable author statement /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042742 // defense response to bacterium // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045730 // respiratory burst // traceable author statement /// 0045730 // respiratory burst // inferred from electronic annotation /// 0045986 // negative regulation of smooth muscle contraction // inferred from electronic annotation /// 0050665 // hydrogen peroxide biosynthetic process // inferred from electronic annotation /// 0050830 // defense response to Gram-positive bacterium // inferred from electronic annotation /// 0050832 // defense response to fungus // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0070946 // neutrophil mediated killing of gram-positive bacterium // inferred from electronic annotation /// 0070947 // neutrophil mediated killing of fungus // inferred from electronic annotation","0005625 // soluble fraction // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0032010 // phagolysosome // traceable author statement /// 0043020 // NADPH oxidase complex // traceable author statement","0003924 // GTPase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // traceable author statement /// 0008942 // nitrite reductase [NAD(P)H] activity // inferred from electronic annotation /// 0009055 // electron carrier activity // traceable author statement /// 0016175 // superoxide-generating NADPH oxidase activity // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from physical interaction /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation /// 0035091 // phosphatidylinositol binding // inferred from direct assay","chr7:72634659-72650039 (+) // 99.56 // q11.23 /// chr7:74188357-74203719 (+) // 99.19 // q11.23 /// chr7:74572384-74587768 (-) // 99.19 // q11.23"]
["11746049_a_at",0.075790405,-0.014644623,0.0104055405,-0.03145647,-0.0104055405,0.14834547,0.9547034,0.8619891,-1.0081037,-0.011644091,1.0081037,"down","VPS52",6293.0,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0005768 // endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","","chr6:33218085-33239824 (-) // 98.66 // p21.32"]
["11758941_x_at",0.040600777,0.06956005,0.0033721924,-0.08961201,-0.0033721924,-0.015857697,0.43846548,0.08821682,1.0527223,0.07412496,1.0527223,"up","MOB1A",55233.0,"0035329 // hippo signaling cascade // inferred from direct assay /// 0035329 // hippo signaling cascade // traceable author statement","0005829 // cytosol // traceable author statement","0005515 // protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:74378364-74406087 (-) // 83.85 // p13.1"]
["11754815_a_at",-0.008511543,9.870529E-4,-9.865761E-4,-0.046620846,0.010425091,0.035064697,0.9762935,0.92443293,-1.0017066,-0.002460005,1.0017066,"down","LDLRAP1",26119.0,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0006810 // transport // non-traceable author statement /// 0006897 // endocytosis // inferred from electronic annotation /// 0006898 // receptor-mediated endocytosis // inferred from direct assay /// 0008202 // steroid metabolic process // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // non-traceable author statement /// 0008203 // cholesterol metabolic process // inferred from electronic annotation /// 0009967 // positive regulation of signal transduction // inferred from direct assay /// 0031623 // receptor internalization // inferred from mutant phenotype /// 0042632 // cholesterol homeostasis // inferred from mutant phenotype /// 0042632 // cholesterol homeostasis // inferred from electronic annotation /// 0042982 // amyloid precursor protein metabolic process // inferred from mutant phenotype /// 0043393 // regulation of protein binding // inferred from mutant phenotype /// 0048260 // positive regulation of receptor-mediated endocytosis // inferred from mutant phenotype /// 0090003 // regulation of establishment of protein localization in plasma membrane // inferred from mutant phenotype /// 0090118 // receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport // inferred from mutant phenotype /// 0090205 // positive regulation of cholesterol metabolic process // inferred by curator","0005737 // cytoplasm // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0005769 // early endosome // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005883 // neurofilament // inferred from sequence or structural similarity /// 0005883 // neurofilament // inferred from electronic annotation /// 0009898 // internal side of plasma membrane // inferred from direct assay /// 0009925 // basal plasma membrane // inferred from direct assay /// 0030121 // AP-1 adaptor complex // inferred from direct assay /// 0030122 // AP-2 adaptor complex // inferred from direct assay /// 0030424 // axon // inferred from sequence or structural similarity /// 0030424 // axon // inferred from electronic annotation /// 0055037 // recycling endosome // inferred from direct assay","0001540 // beta-amyloid binding // inferred from physical interaction /// 0001540 // beta-amyloid binding // inferred from electronic annotation /// 0001784 // phosphotyrosine binding // inferred from direct assay /// 0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005546 // phosphatidylinositol-4,5-bisphosphate binding // inferred from direct assay /// 0030159 // receptor signaling complex scaffold activity // inferred from mutant phenotype /// 0030276 // clathrin binding // inferred from direct assay /// 0035591 // signaling adaptor activity // inferred from direct assay /// 0035612 // AP-2 adaptor complex binding // inferred from direct assay /// 0035615 // clathrin adaptor activity // inferred from direct assay /// 0050750 // low-density lipoprotein particle receptor binding // inferred from physical interaction","chr1:25879177-25895375 (+) // 72.98 // p36.11"]
["11733367_x_at",0.0049934387,-5.4073334E-4,-0.0776062,-0.038535118,5.4073334E-4,0.026737213,0.83033514,0.5625102,-1.0144038,-0.020632083,1.0144038,"down","C19orf60",55049.0,"","","0005515 // protein binding // inferred from physical interaction","chr19:18699494-18703147 (+) // 97.6 // p13.11"]
["11756890_s_at",-0.022937775,0.0018978119,0.04285431,-0.015609741,0.06525135,-0.0018978119,0.93212026,0.7973643,-1.006009,-0.008643187,1.006009,"down","ATP5A1",498.0,"0001937 // negative regulation of endothelial cell proliferation // inferred from mutant phenotype /// 0006172 // ADP biosynthetic process // inferred from electronic annotation /// 0006200 // ATP catabolic process // inferred from direct assay /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006629 // lipid metabolic process // inferred from sequence or structural similarity /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006754 // ATP biosynthetic process // inferred by curator /// 0006754 // ATP biosynthetic process // non-traceable author statement /// 0006754 // ATP biosynthetic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0009790 // embryo development // inferred from sequence or structural similarity /// 0009790 // embryo development // inferred from electronic annotation /// 0015986 // ATP synthesis coupled proton transport // inferred from electronic annotation /// 0015991 // ATP hydrolysis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0042776 // mitochondrial ATP synthesis coupled proton transport // inferred by curator /// 0042776 // mitochondrial ATP synthesis coupled proton transport // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046034 // ATP metabolic process // inferred from electronic annotation","0000275 // mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) // inferred from electronic annotation /// 0005739 // mitochondrion // inferred by curator /// 0005739 // mitochondrion // non-traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from direct assay /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005753 // mitochondrial proton-transporting ATP synthase complex // inferred from direct assay /// 0005759 // mitochondrial matrix // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0008180 // signalosome // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016469 // proton-transporting two-sector ATPase complex // inferred from electronic annotation /// 0033178 // proton-transporting two-sector ATPase complex, catalytic domain // inferred from electronic annotation /// 0045261 // proton-transporting ATP synthase complex, catalytic core F(1) // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from sequence or structural similarity /// 0005524 // ATP binding // inferred from electronic annotation /// 0016820 // hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from direct assay /// 0016887 // ATPase activity // inferred from electronic annotation /// 0022857 // transmembrane transporter activity // inferred by curator /// 0042288 // MHC class I protein binding // inferred from direct assay /// 0043499 // eukaryotic cell surface binding // inferred from direct assay /// 0043531 // ADP binding // inferred from electronic annotation /// 0046933 // hydrogen ion transporting ATP synthase activity, rotational mechanism // inferred from sequence or structural similarity /// 0046933 // hydrogen ion transporting ATP synthase activity, rotational mechanism // inferred from electronic annotation /// 0046961 // proton-transporting ATPase activity, rotational mechanism // inferred from electronic annotation","chr18:43664115-43668662 (-) // 62.35 // q21.1"]
["11737168_a_at",0.020771027,0.07360029,-0.020771027,-0.028623581,0.087919235,-0.071703434,0.8605709,0.62937796,1.0200708,0.028669275,1.0200708,"up","STRN3",29966.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0032355 // response to estradiol stimulus // inferred from sequence or structural similarity /// 0032355 // response to estradiol stimulus // inferred from electronic annotation /// 0033147 // negative regulation of intracellular estrogen receptor signaling pathway // inferred from sequence or structural similarity /// 0033147 // negative regulation of intracellular estrogen receptor signaling pathway // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay","0000159 // protein phosphatase type 2A complex // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030425 // dendrite // inferred from sequence or structural similarity /// 0030425 // dendrite // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from sequence or structural similarity /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043234 // protein complex // inferred from sequence or structural similarity /// 0043234 // protein complex // inferred from electronic annotation","0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // non-traceable author statement /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0032403 // protein complex binding // inferred from direct assay /// 0032403 // protein complex binding // inferred from electronic annotation /// 0051721 // protein phosphatase 2A binding // inferred from direct assay /// 0070016 // armadillo repeat domain binding // inferred from physical interaction","chr14:31363004-31495607 (-) // 97.57 // q12"]
["11760891_s_at",0.021792412,-0.021792412,0.091489315,-0.032396317,0.07261133,-0.045921326,0.82507986,0.5516857,1.022711,0.032398578,1.022711,"up","GPAT2",150763.0,"0006072 // glycerol-3-phosphate metabolic process // inferred from sequence or structural similarity /// 0006072 // glycerol-3-phosphate metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008654 // phospholipid biosynthetic process // inferred from electronic annotation /// 0016024 // CDP-diacylglycerol biosynthetic process // inferred from electronic annotation /// 0019432 // triglyceride biosynthetic process // inferred from sequence or structural similarity /// 0019432 // triglyceride biosynthetic process // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // inferred from electronic annotation","0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005739 // mitochondrion // non-traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004366 // glycerol-3-phosphate O-acyltransferase activity // inferred from sequence or structural similarity /// 0004366 // glycerol-3-phosphate O-acyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation","chr2:96455412-96463594 (+) // 96.76 // q11.1 /// chr2:96692480-96700664 (-) // 96.82 // q11.1"]
["11740761_at",-0.015524387,-0.08292031,0.028836012,-0.014175415,0.019676685,0.014175177,0.760169,0.43253994,-1.0208435,-0.029761719,1.0208435,"down","PRKG2",5593.0,"0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046209 // nitric oxide metabolic process // traceable author statement /// 0050999 // regulation of nitric-oxide synthase activity // traceable author statement","0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004692 // cGMP-dependent protein kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0030553 // cGMP binding // inferred from electronic annotation","chr4:82009812-82126215 (-) // 98.81 // q21.21"]
["11722958_a_at",0.20299768,0.0,0.0,0.03969145,-0.119651794,-0.03969145,0.63817513,0.25899306,1.0773969,0.10754978,1.0773969,"up","ABLIM2",84448.0,"0007010 // cytoskeleton organization // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0030016 // myofibril // inferred from electronic annotation /// 0045111 // intermediate filament cytoskeleton // inferred from direct assay","0003779 // actin binding // inferred from electronic annotation /// 0008270 // zinc ion binding // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr4:7967053-8160559 (-) // 95.88 // p16.1"]
["11762347_at",0.17831612,-0.007853031,-0.09592438,0.007853508,-0.30998564,0.093904495,0.8271813,0.55639434,1.0675143,0.094255395,1.0675143,"up","RNF7",9616.0,"0006916 // anti-apoptosis // traceable author statement /// 0008631 // induction of apoptosis by oxidative stress // traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0045116 // protein neddylation // inferred from direct assay /// 0051775 // response to redox state // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement","0005507 // copper ion binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008270 // zinc ion binding // traceable author statement /// 0019788 // NEDD8 ligase activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:141457183-141461869 (+) // 73.21 // q23"]
["11749877_x_at",-0.031649113,0.019124508,0.09286213,-0.019124508,0.04091978,-0.07553005,0.7499328,0.41650593,1.0314621,0.044690773,1.0314621,"up","MKNK2",2872.0,"0006417 // regulation of translation // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0007243 // intracellular protein kinase cascade // inferred from direct assay /// 0007243 // intracellular protein kinase cascade // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030097 // hemopoiesis // inferred from direct assay /// 0071243 // cellular response to arsenic-containing substance // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016605 // PML body // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:2039496-2046692 (-) // 99.16 // p13.3"]
["11752328_a_at",-0.047944307,0.022462845,-0.06939602,0.15661788,0.15730977,-0.022462845,0.49519074,0.122496925,-1.0933692,-0.1287807,1.0933692,"down","IGF1R",3480.0,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0006916 // anti-apoptosis // traceable author statement /// 0006955 // immune response // inferred from mutant phenotype /// 0007165 // signal transduction // traceable author statement /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0007409 // axonogenesis // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0014065 // phosphatidylinositol 3-kinase cascade // inferred by curator /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030010 // establishment of cell polarity // inferred from electronic annotation /// 0030238 // male sex determination // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from mutant phenotype /// 0030879 // mammary gland development // inferred from electronic annotation /// 0031017 // exocrine pancreas development // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from electronic annotation /// 0032467 // positive regulation of cytokinesis // inferred from electronic annotation /// 0033197 // response to vitamin E // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043409 // negative regulation of MAPK cascade // inferred from electronic annotation /// 0043410 // positive regulation of MAPK cascade // inferred from electronic annotation /// 0045740 // positive regulation of DNA replication // inferred from mutant phenotype /// 0045768 // positive regulation of anti-apoptosis // inferred from electronic annotation /// 0046328 // regulation of JNK cascade // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from electronic annotation /// 0048009 // insulin-like growth factor receptor signaling pathway // inferred from direct assay /// 0048009 // insulin-like growth factor receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // inferred from direct assay /// 0051054 // positive regulation of DNA metabolic process // inferred from electronic annotation /// 0051262 // protein tetramerization // inferred from direct assay /// 0051291 // protein heterooligomerization // inferred from electronic annotation /// 0051389 // inactivation of MAPKK activity // inferred from direct assay /// 0051897 // positive regulation of protein kinase B signaling cascade // inferred from electronic annotation /// 0051898 // negative regulation of protein kinase B signaling cascade // inferred from electronic annotation /// 0060740 // prostate gland epithelium morphogenesis // inferred from electronic annotation /// 0090031 // positive regulation of steroid hormone biosynthetic process // inferred from electronic annotation","0005792 // microsome // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred by curator /// 0005901 // caveola // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005010 // insulin-like growth factor-activated receptor activity // inferred from direct assay /// 0005010 // insulin-like growth factor-activated receptor activity // traceable author statement /// 0005158 // insulin receptor binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005520 // insulin-like growth factor binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0031994 // insulin-like growth factor I binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0043548 // phosphatidylinositol 3-kinase binding // inferred from physical interaction /// 0043548 // phosphatidylinositol 3-kinase binding // inferred from electronic annotation /// 0043559 // insulin binding // inferred from physical interaction /// 0043560 // insulin receptor substrate binding // inferred from physical interaction /// 0043560 // insulin receptor substrate binding // inferred from electronic annotation","chr15:99192810-99460184 (+) // 99.96 // q26.3"]
["11762990_x_at",-0.003865242,0.020273685,-0.0967474,-0.066936016,0.003865242,0.09190178,0.8314511,0.56547767,-1.0255444,-0.036389958,1.0255444,"down","MGC40069 /// TRAC /// TRAJ17 /// TRAV20","28663 /// 28738 /// 28755 /// 348035","0006968 // cellular defense response // non-traceable author statement /// 0031295 // T cell costimulation // traceable author statement /// 0050776 // regulation of immune response // traceable author statement /// 0050852 // T cell receptor signaling pathway // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0042287 // MHC protein binding // non-traceable author statement /// 0042605 // peptide antigen binding // non-traceable author statement","chr14:22749033-23019607 (+) // 98.46 // q11.2"]
["11763376_s_at",-0.119740486,-0.06002283,-0.09255934,0.17865849,0.11497402,0.060022354,0.16168956,0.0055549587,-1.1556137,-0.20865916,1.1556137,"down","PCBP2",5094.0,"0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0009615 // response to virus // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016071 // mRNA metabolic process // non-traceable author statement /// 0032480 // negative regulation of type I interferon production // traceable author statement /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from mutant phenotype /// 0045087 // innate immune response // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation /// 0050687 // negative regulation of defense response to virus // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction","chr12:53861154-53862449 (+) // 95.63 // q13.13"]
["11757360_s_at",0.030984879,0.019731522,-0.019081116,-0.08511257,0.019081116,-0.030917168,0.64857167,0.27224725,1.030155,0.042861346,1.030155,"up","BAG3",9531.0,"0006457 // protein folding // non-traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // non-traceable author statement /// 0006916 // anti-apoptosis // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0021510 // spinal cord development // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0019717 // synaptosome // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0051087 // chaperone binding // inferred from electronic annotation","chr10:121436768-121437325 (+) // 96.53 // q26.11"]
["11734469_a_at",0.02182126,-0.121020794,0.06716323,-0.03335643,0.29730415,-0.02182126,0.7958352,0.49641442,-1.0653944,-0.09138761,1.0653944,"down","TMEM215",401498.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr9:32783496-32789197 (+) // 94.94 // p21.1"]
["11746159_a_at",0.16641426,0.067472935,0.489213,-0.43696308,-0.12026358,-0.067472935,0.38316435,0.05913386,1.365346,0.44926655,1.365346,"up","PBX3",5090.0,"0002087 // regulation of respiratory gaseous exchange by neurological system process // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007387 // anterior compartment pattern formation // traceable author statement /// 0007388 // posterior compartment specification // traceable author statement /// 0007585 // respiratory gaseous exchange // inferred from electronic annotation /// 0008344 // adult locomotory behavior // inferred from electronic annotation /// 0021516 // dorsal spinal cord development // inferred from electronic annotation /// 0048666 // neuron development // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr9:128677962-128728616 (+) // 92.41 // q33.3"]
["11758843_at",0.02092743,-0.22590375,0.04887414,-0.006975889,0.006975889,-0.21293974,0.959254,0.8745373,1.0132189,0.018945865,1.0132189,"up","MIER2",54531.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation","chr19:301443-336175 (-) // 59.85 // p13.3"]
["11722039_x_at",-0.008377075,-0.04679966,0.13368797,0.008377075,0.041312218,-0.112214565,0.82407016,0.5496619,1.0331231,0.047012214,1.0331231,"up","FES",2242.0,"0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007275 // multicellular organismal development // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0008360 // regulation of cell shape // inferred from mutant phenotype /// 0010976 // positive regulation of neuron projection development // inferred from mutant phenotype /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0030155 // regulation of cell adhesion // inferred from mutant phenotype /// 0031116 // positive regulation of microtubule polymerization // inferred from mutant phenotype /// 0042127 // regulation of cell proliferation // inferred from mutant phenotype /// 0043304 // regulation of mast cell degranulation // inferred from mutant phenotype /// 0045595 // regulation of cell differentiation // inferred from mutant phenotype /// 0045639 // positive regulation of myeloid cell differentiation // inferred from mutant phenotype /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0060627 // regulation of vesicle-mediated transport // traceable author statement /// 2000145 // regulation of cell motility // inferred from mutant phenotype /// 2000251 // positive regulation of actin cytoskeleton reorganization // inferred from mutant phenotype","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0005925 // focal adhesion // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0031234 // extrinsic to internal side of plasma membrane // inferred from direct assay /// 0031410 // cytoplasmic vesicle // inferred from direct assay /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // traceable author statement /// 0004715 // non-membrane spanning protein tyrosine kinase activity // inferred from direct assay /// 0004715 // non-membrane spanning protein tyrosine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0034987 // immunoglobulin receptor binding // inferred from direct assay /// 0035091 // phosphatidylinositol binding // inferred from direct assay","chr15:91427641-91439080 (+) // 98.28 // q26.1"]
["11718271_a_at",-0.050269127,-0.0066022873,0.0018377304,0.019276619,-0.0018377304,0.044067383,0.5134087,0.1365745,-1.0272923,-0.038846668,1.0272923,"down","TAX1BP1",8887.0,"0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // traceable author statement /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from sequence or structural similarity /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from electronic annotation /// 0032480 // negative regulation of type I interferon production // traceable author statement /// 0045087 // innate immune response // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0019900 // kinase binding // inferred from sequence or structural similarity /// 0019900 // kinase binding // inferred from electronic annotation","chr7:27779716-27869658 (+) // 98.78 // p15.2"]
["11745573_s_at",0.048205376,-0.048205376,0.32913208,-0.11201,-0.19334888,0.08993912,0.6449493,0.26763135,1.134076,0.18151732,1.134076,"up","LOC646938 /// TBC1D2B","23102 /// 646938","0032313 // regulation of Rab GTPase activity // inferred from electronic annotation /// 0032851 // positive regulation of Rab GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005097 // Rab GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation","chr15:79044378-79047093 (+) // 99.89 // q25.1 /// chr15:78289065-78291767 (-) // 96.85 // q24.3"]
["11738742_at",0.013682842,-0.049241066,0.06764102,-0.020389318,-0.013682842,0.053195,0.9755084,0.9214247,1.0029988,0.0043199216,1.0029988,"up","OR2AT4",341152.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr11:74799757-74800799 (-) // 100.0 // q13.4"]
["11744609_a_at",-0.011472225,0.03887129,0.15154743,-0.041222095,0.011471748,-0.029463291,0.57903093,0.19293998,1.0565687,0.07938664,1.0565687,"up","ATXN7",6314.0,"0000226 // microtubule cytoskeleton organization // inferred from mutant phenotype /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006997 // nucleus organization // traceable author statement /// 0007601 // visual perception // traceable author statement /// 0008219 // cell death // inferred from electronic annotation /// 0016578 // histone deubiquitination // inferred from direct assay /// 0042326 // negative regulation of phosphorylation // inferred from electronic annotation /// 0043569 // negative regulation of insulin-like growth factor receptor signaling pathway // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0016363 // nuclear matrix // inferred from electronic annotation","0003682 // chromatin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation","chr3:63850232-63982293 (+) // 93.17 // p14.1"]
["11755557_a_at",0.020977974,-0.006532192,-0.0049471855,-0.006532192,0.046055794,0.0049471855,0.8284487,0.55845445,-1.008113,-0.011657398,1.008113,"down","HACE1",57531.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006464 // cellular protein modification process // inferred from electronic annotation /// 0006944 // cellular membrane fusion // inferred from mutant phenotype /// 0007030 // Golgi organization // inferred from direct assay /// 0007049 // cell cycle // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0016601 // Rac protein signal transduction // traceable author statement /// 0030334 // regulation of cell migration // inferred from mutant phenotype /// 0042787 // protein ubiquitination involved in ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0070936 // protein K48-linked ubiquitination // inferred from direct assay","0000139 // Golgi membrane // inferred from direct assay /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // not recorded /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation","0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation /// 0017137 // Rab GTPase binding // inferred from direct assay /// 0048365 // Rac GTPase binding // inferred from physical interaction","chr6:105177044-105179761 (-) // 56.44 // q16.3"]
["11758662_s_at",-0.0659914,0.11449146,0.28768492,0.032873154,-0.10458279,-0.032873154,0.63166744,0.25095665,1.1072052,0.14692256,1.1072052,"up","ZNF358",140467.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0019827 // stem cell maintenance // inferred from sequence or structural similarity /// 0021915 // neural tube development // inferred from sequence or structural similarity /// 0035115 // embryonic forelimb morphogenesis // inferred from sequence or structural similarity","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:7584992-7585304 (+) // 93.29 // p13.2"]
["11743654_a_at",-0.12595654,-0.0557456,0.08810711,-0.17356682,0.0557456,0.06838131,0.9642533,0.89092404,-1.0102543,-0.01471844,1.0102543,"down","APOH",350.0,"0001937 // negative regulation of endothelial cell proliferation // inferred from direct assay /// 0006641 // triglyceride metabolic process // inferred from direct assay /// 0007596 // blood coagulation // inferred from electronic annotation /// 0007597 // blood coagulation, intrinsic pathway // inferred from direct assay /// 0010596 // negative regulation of endothelial cell migration // inferred from direct assay /// 0016525 // negative regulation of angiogenesis // inferred from direct assay /// 0030193 // regulation of blood coagulation // inferred from electronic annotation /// 0030194 // positive regulation of blood coagulation // traceable author statement /// 0030195 // negative regulation of blood coagulation // inferred from direct assay /// 0031100 // organ regeneration // inferred from electronic annotation /// 0031639 // plasminogen activation // inferred from direct assay /// 0033033 // negative regulation of myeloid cell apoptotic process // inferred from direct assay /// 0034197 // triglyceride transport // inferred from sequence or structural similarity /// 0034197 // triglyceride transport // inferred from electronic annotation /// 0034392 // negative regulation of smooth muscle cell apoptotic process // inferred from direct assay /// 0051006 // positive regulation of lipoprotein lipase activity // inferred from direct assay /// 0051917 // regulation of fibrinolysis // inferred from direct assay /// 0051918 // negative regulation of fibrinolysis // inferred from direct assay","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0031012 // extracellular matrix // inferred from direct assay /// 0034361 // very-low-density lipoprotein particle // inferred from direct assay /// 0034364 // high-density lipoprotein particle // inferred from direct assay /// 0042627 // chylomicron // inferred from direct assay","0001948 // glycoprotein binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from direct assay /// 0008201 // heparin binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from direct assay /// 0008289 // lipid binding // inferred from electronic annotation /// 0043499 // eukaryotic cell surface binding // inferred from direct assay /// 0060230 // lipoprotein lipase activator activity // inferred from direct assay","chr17:64208146-64225541 (-) // 81.96 // q24.2"]
["11759167_at",0.06976032,0.020199776,0.010222435,-0.05560541,-0.010222435,-0.25116205,0.5213836,0.14197753,1.1011854,0.13905744,1.1011854,"up","HIST1H2BC /// HIST1H2BE /// HIST1H2BF /// HIST1H2BG /// HIST1H2BI","8339 /// 8343 /// 8344 /// 8346 /// 8347","0006334 // nucleosome assembly // non-traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0042742 // defense response to bacterium // inferred from electronic annotation","0000786 // nucleosome // non-traceable author statement /// 0000786 // nucleosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation","chr6:26183957-26184458 (+) // 99.8 // p22.2"]
["11757066_s_at",-0.0026106834,0.11508179,-0.10250616,-0.035981655,0.0026106834,0.0026106834,0.9482045,0.84283566,1.0094539,0.0135750165,1.0094539,"up","ING5",84289.0,"0006260 // DNA replication // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006473 // protein acetylation // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0016568 // chromatin modification // inferred from electronic annotation /// 0043966 // histone H3 acetylation // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045926 // negative regulation of growth // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0070776 // MOZ/MORF histone acetyltransferase complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0035064 // methylated histone residue binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:242641459-242668890 (+) // 84.15 // q37.3"]
["11741304_a_at",0.056624413,0.021493673,-0.058904648,-0.18258238,-0.021349669,0.021349669,0.7372449,0.3964072,1.0477288,0.067265294,1.0477288,"up","NRG1",3084.0,"0006916 // anti-apoptosis // inferred from direct assay /// 0007154 // cell communication // traceable author statement /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from direct assay /// 0007171 // activation of transmembrane receptor protein tyrosine kinase activity // inferred by curator /// 0007171 // activation of transmembrane receptor protein tyrosine kinase activity // inferred from direct assay /// 0007171 // activation of transmembrane receptor protein tyrosine kinase activity // non-traceable author statement /// 0007219 // Notch signaling pathway // inferred from sequence or structural similarity /// 0007399 // nervous system development // traceable author statement /// 0008283 // cell proliferation // inferred from direct assay /// 0009790 // embryo development // inferred from electronic annotation /// 0010667 // negative regulation of cardiac muscle cell apoptotic process // inferred from direct assay /// 0014032 // neural crest cell development // traceable author statement /// 0030307 // positive regulation of cell growth // inferred from direct assay /// 0030879 // mammary gland development // traceable author statement /// 0042060 // wound healing // inferred from direct assay /// 0042060 // wound healing // traceable author statement /// 0043496 // regulation of protein homodimerization activity // traceable author statement /// 0043497 // regulation of protein heterodimerization activity // inferred from direct assay /// 0043624 // cellular protein complex disassembly // inferred from genetic interaction /// 0045785 // positive regulation of cell adhesion // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0051048 // negative regulation of secretion // inferred from direct assay /// 0051155 // positive regulation of striated muscle cell differentiation // inferred from sequence or structural similarity /// 0055007 // cardiac muscle cell differentiation // inferred from sequence or structural similarity /// 0055012 // ventricular cardiac muscle cell differentiation // inferred from direct assay /// 0060045 // positive regulation of cardiac muscle cell proliferation // inferred from direct assay /// 0061098 // positive regulation of protein tyrosine kinase activity // inferred from direct assay","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from direct assay","0003712 // transcription cofactor activity // inferred from direct assay /// 0005102 // receptor binding // inferred from physical interaction /// 0005102 // receptor binding // inferred from electronic annotation /// 0005125 // cytokine activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // inferred from direct assay /// 0008083 // growth factor activity // non-traceable author statement /// 0008083 // growth factor activity // inferred from electronic annotation /// 0030296 // protein tyrosine kinase activator activity // inferred from direct assay /// 0030297 // transmembrane receptor protein tyrosine kinase activator activity // inferred by curator /// 0030297 // transmembrane receptor protein tyrosine kinase activator activity // non-traceable author statement /// 0030971 // receptor tyrosine kinase binding // non-traceable author statement /// 0043125 // ErbB-3 class receptor binding // inferred from direct assay /// 0043125 // ErbB-3 class receptor binding // inferred from physical interaction","chr8:32405752-32622661 (+) // 97.89 // p12"]
["11735289_a_at",0.0060839653,0.19212866,-0.07962847,0.0060839653,-0.0060839653,-0.13561153,0.74566036,0.40981764,1.0604906,0.08473184,1.0604906,"up","SLC6A5",9152.0,"0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006836 // neurotransmitter transport // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0005328 // neurotransmitter:sodium symporter activity // inferred from electronic annotation /// 0015293 // symporter activity // inferred from electronic annotation /// 0015375 // glycine:sodium symporter activity // traceable author statement","chr11:20620945-20676608 (+) // 98.31 // p15.1"]
["11762675_at",-0.036827803,5.393028E-4,-0.22089744,0.050595045,-5.393028E-4,0.037751913,0.56153595,0.17645189,-1.0829735,-0.114997916,1.0829735,"down","FCGR1A",2209.0,"0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006911 // phagocytosis, engulfment // traceable author statement /// 0006955 // immune response // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement","0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030669 // clathrin-coated endocytic vesicle membrane // traceable author statement /// 0031901 // early endosome membrane // traceable author statement","0004872 // receptor activity // inferred from electronic annotation /// 0005057 // receptor signaling protein activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0019864 // IgG binding // inferred from electronic annotation","chr1:149369293-149763584 (+) // 99.11 // q21.2"]
["11717614_at",-0.049056053,0.050858498,0.14811468,-0.07411909,-0.0077843666,0.0077843666,0.6681087,0.2962239,1.0531265,0.074678674,1.0531265,"up","KIF13B",23303.0,"0006605 // protein targeting // traceable author statement /// 0007018 // microtubule-based movement // traceable author statement /// 0007018 // microtubule-based movement // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0042110 // T cell activation // non-traceable author statement /// 0050770 // regulation of axonogenesis // inferred from direct assay","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0030424 // axon // inferred from direct assay /// 0030424 // axon // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003777 // microtubule motor activity // non-traceable author statement /// 0003777 // microtubule motor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0071889 // 14-3-3 protein binding // inferred from direct assay","chr8:28924795-29120610 (-) // 98.96 // p12"]
["11736554_x_at",0.022109509,-0.121052265,0.2648549,-0.114408016,0.20623922,-0.022109509,0.94703245,0.83859295,1.0224736,0.032063555,1.0224736,"up","ZNF223",7766.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:44556163-44572142 (+) // 79.7 // q13.31"]
["11744413_x_at",0.07369232,0.09699535,0.08909702,-0.11487675,-0.073693275,-0.07424927,0.068419255,3.356438E-4,1.1283396,0.1742014,1.1283396,"up","HSPA1A /// HSPA1B","3303 /// 3304","0006402 // mRNA catabolic process // inferred from direct assay /// 0006916 // anti-apoptosis // traceable author statement /// 0006950 // response to stress // inferred from electronic annotation /// 0006986 // response to unfolded protein // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0030308 // negative regulation of cell growth // inferred from mutant phenotype /// 0042026 // protein refolding // inferred from direct assay /// 0090084 // negative regulation of inclusion body assembly // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // traceable author statement /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0008180 // signalosome // inferred from direct assay /// 0016234 // inclusion body // inferred from direct assay /// 0016235 // aggresome // inferred from direct assay /// 0016607 // nuclear speck // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0044183 // protein binding involved in protein folding // inferred from direct assay /// 0047485 // protein N-terminus binding // inferred from physical interaction /// 0051082 // unfolded protein binding // traceable author statement","chr6:31783319-31785722 (+) // 98.08 // p21.33"]
["11735960_at",0.037746668,-0.05348611,0.011762381,0.04764104,-0.011762381,-0.015530109,0.9415193,0.82314676,-1.0056362,-0.008108511,1.0056362,"down","FGF6",2251.0,"0001502 // cartilage condensation // inferred from electronic annotation /// 0001525 // angiogenesis // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from genetic interaction /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from genetic interaction /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045445 // myoblast differentiation // inferred from electronic annotation /// 0051781 // positive regulation of cell division // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0042383 // sarcolemma // inferred from electronic annotation","0008083 // growth factor activity // inferred from electronic annotation /// 0008083 // growth factor activity // traceable author statement","chr12:4543307-4554780 (-) // 99.33 // p13.32"]
["11759011_at",8.363724E-4,-0.06075239,0.15071344,-8.363724E-4,0.09674168,-0.047200203,0.9547555,0.8621177,1.0097729,0.01403086,1.0097729,"up","PRPF4",9128.0,"0000375 // RNA splicing, via transesterification reactions // non-traceable author statement /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0006396 // RNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // non-traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred by curator /// 0005681 // spliceosomal complex // non-traceable author statement /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0015030 // Cajal body // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation /// 0071001 // U4/U6 snRNP // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr9:116037622-116055454 (+) // 91.14 // q32"]
["11732901_a_at",0.010232925,-0.08791828,0.18360376,0.05864048,-0.010233402,-0.10081005,0.84576684,0.5962746,1.0372573,0.05277383,1.0372573,"up","APOBEC3A /// APOBEC3A_B /// APOBEC3B","100913187 /// 200315 /// 9582","0008152 // metabolic process // inferred from electronic annotation /// 0009615 // response to virus // inferred from electronic annotation /// 0009972 // cytidine deamination // inferred from direct assay /// 0009972 // cytidine deamination // inferred from mutant phenotype /// 0010529 // negative regulation of transposition // inferred from direct assay /// 0044356 // clearance of foreign intracellular DNA by conversion of DNA cytidine to uridine // inferred from direct assay /// 0045071 // negative regulation of viral genome replication // inferred from direct assay /// 0045087 // innate immune response // inferred from direct assay /// 0051607 // defense response to virus // inferred from direct assay /// 0070383 // DNA cytosine deamination // inferred from direct assay /// 0070383 // DNA cytosine deamination // inferred from mutant phenotype /// 0071466 // cellular response to xenobiotic stimulus // inferred from direct assay /// 0080111 // DNA demethylation // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004126 // cytidine deaminase activity // inferred from direct assay /// 0004126 // cytidine deaminase activity // inferred from mutant phenotype /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016814 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr22:39378351-39388781 (+) // 98.39 // q13.1"]
["11743241_s_at",0.029183626,-0.029183626,-0.14124703,0.096526384,-0.036860466,0.20436645,0.5763333,0.19063818,-1.0981637,-0.13509315,1.0981637,"down","KRTAP21-1 /// LOC731932","337977 /// 731932","0001942 // hair follicle development // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from electronic annotation /// 0022405 // hair cycle process // inferred from electronic annotation /// 0031077 // post-embryonic camera-type eye development // inferred from electronic annotation /// 0042640 // anagen // inferred from electronic annotation /// 0043480 // pigment accumulation in tissues // inferred from electronic annotation /// 0043588 // skin development // inferred from electronic annotation /// 0048589 // developmental growth // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from electronic annotation","0005882 // intermediate filament // inferred from electronic annotation","","chr13:64320933-64321842 (+) // 48.07 // q21.31"]
["11748883_a_at",0.033675194,0.01708889,-0.0058460236,0.0057058334,-0.026216984,-0.0057053566,0.569732,0.18395902,1.0165714,0.023711551,1.0165714,"up","FAM217B",63939.0,"","","","chr20:58515443-58520182 (+) // 96.39 // q13.33"]
["11728769_at",-0.034478188,0.03447795,0.092951775,-0.07630634,0.066218376,-0.08901286,0.7136755,0.35951152,1.0453727,0.06401742,1.0453727,"up","ST6GALNAC3",256435.0,"0006486 // protein glycosylation // inferred from electronic annotation /// 0006677 // glycosylceramide metabolic process // inferred from direct assay /// 0006687 // glycosphingolipid metabolic process // inferred from direct assay /// 0009100 // glycoprotein metabolic process // inferred from direct assay","0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030173 // integral to Golgi membrane // inferred from electronic annotation","0008373 // sialyltransferase activity // inferred from direct assay /// 0008373 // sialyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation","chr1:76540386-77100283 (+) // 93.7 // p31.1"]
["11734568_a_at",-0.0641098,0.0011558533,0.020575047,0.09096718,-0.04919815,-0.0011563301,0.8466804,0.59854674,-1.0193602,-0.027663909,1.0193602,"down","MUTYH",4595.0,"0006281 // DNA repair // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006284 // base-excision repair // inferred from electronic annotation /// 0006284 // base-excision repair // traceable author statement /// 0006285 // base-excision repair, AP site formation // traceable author statement /// 0006298 // mismatch repair // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0045007 // depurination // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004519 // endonuclease activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity, acting on glycosyl bonds // inferred from electronic annotation /// 0032405 // MutLalpha complex binding // inferred from direct assay /// 0032406 // MutLbeta complex binding // inferred from direct assay /// 0032407 // MutSalpha complex binding // inferred from direct assay /// 0032408 // MutSbeta complex binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation /// 0051539 // 4 iron, 4 sulfur cluster binding // inferred from electronic annotation","chr1:45794914-45805796 (-) // 96.95 // p34.1"]
["11727594_a_at",-0.005581856,-0.09788036,-0.004243374,0.023917198,0.004242897,0.020018578,0.56005496,0.17512615,-1.0366734,-0.051961485,1.0366734,"down","KIAA2026",158358.0,"","","","chr9:5919021-6008484 (-) // 97.77 // p24.1"]
["11731914_at",0.19096446,0.09832454,-0.10091519,-0.2538371,0.050332785,-0.050332785,0.6719965,0.3008737,1.1075745,0.14740369,1.1075745,"up","AMIGO1",57463.0,"0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from sequence or structural similarity /// 0007156 // homophilic cell adhesion // inferred from electronic annotation /// 0007157 // heterophilic cell-cell adhesion // inferred from sequence or structural similarity /// 0007157 // heterophilic cell-cell adhesion // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007409 // axonogenesis // inferred from electronic annotation /// 0007413 // axonal fasciculation // inferred from sequence or structural similarity /// 0007413 // axonal fasciculation // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0042552 // myelination // inferred from sequence or structural similarity /// 0042552 // myelination // inferred from electronic annotation /// 0050772 // positive regulation of axonogenesis // inferred from sequence or structural similarity /// 0050772 // positive regulation of axonogenesis // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","","chr1:110046800-110052352 (-) // 99.51 // p13.3"]
["11736454_x_at",-0.025524616,0.025524616,-0.052417994,0.07187295,-0.120654345,0.09484029,0.8801877,0.67230874,-1.0230138,-0.03282565,1.0230138,"down","UGT2B10",7365.0,"0006629 // lipid metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0015020 // glucuronosyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0016758 // transferase activity, transferring hexosyl groups // inferred from electronic annotation","chr4:69681712-69697739 (+) // 91.09 // q13.2"]
["11742802_a_at",0.02127409,0.03542137,-0.044166565,0.0108475685,-0.015705109,-0.010848045,0.9067102,0.734103,1.0065448,0.009411427,1.0065448,"up","SRD5A1",6715.0,"0001655 // urogenital system development // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006694 // steroid biosynthetic process // inferred from electronic annotation /// 0006702 // androgen biosynthetic process // traceable author statement /// 0006702 // androgen biosynthetic process // inferred from electronic annotation /// 0007530 // sex determination // non-traceable author statement /// 0007548 // sex differentiation // inferred from electronic annotation /// 0008202 // steroid metabolic process // traceable author statement /// 0008202 // steroid metabolic process // inferred from electronic annotation /// 0008209 // androgen metabolic process // inferred from electronic annotation /// 0008584 // male gonad development // inferred from electronic annotation /// 0009267 // cellular response to starvation // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0014850 // response to muscle activity // inferred from electronic annotation /// 0016101 // diterpenoid metabolic process // inferred from electronic annotation /// 0021510 // spinal cord development // inferred from electronic annotation /// 0021766 // hippocampus development // inferred from electronic annotation /// 0021794 // thalamus development // inferred from electronic annotation /// 0021854 // hypothalamus development // inferred from electronic annotation /// 0021983 // pituitary gland development // inferred from electronic annotation /// 0021987 // cerebral cortex development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030539 // male genitalia development // inferred from electronic annotation /// 0030540 // female genitalia development // inferred from electronic annotation /// 0032354 // response to follicle-stimulating hormone stimulus // inferred from electronic annotation /// 0032355 // response to estradiol stimulus // inferred from electronic annotation /// 0032869 // cellular response to insulin stimulus // inferred from electronic annotation /// 0033574 // response to testosterone stimulus // inferred from electronic annotation /// 0042428 // serotonin metabolic process // inferred from electronic annotation /// 0042448 // progesterone metabolic process // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042747 // circadian sleep/wake cycle, REM sleep // inferred from electronic annotation /// 0043627 // response to estrogen stimulus // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0060348 // bone development // inferred from electronic annotation /// 0060416 // response to growth hormone stimulus // inferred from electronic annotation /// 0060992 // response to fungicide // inferred from electronic annotation /// 0071320 // cellular response to cAMP // inferred from electronic annotation /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation /// 0071392 // cellular response to estradiol stimulus // inferred from electronic annotation /// 0071394 // cellular response to testosterone stimulus // inferred from electronic annotation /// 0071407 // cellular response to organic cyclic compound // inferred from electronic annotation /// 0071549 // cellular response to dexamethasone stimulus // inferred from electronic annotation /// 0071872 // cellular response to epinephrine stimulus // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043209 // myelin sheath // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0070852 // cell body fiber // inferred from electronic annotation","0003865 // 3-oxo-5-alpha-steroid 4-dehydrogenase activity // inferred from direct assay /// 0003865 // 3-oxo-5-alpha-steroid 4-dehydrogenase activity // inferred from electronic annotation /// 0009055 // electron carrier activity // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016627 // oxidoreductase activity, acting on the CH-CH group of donors // inferred from electronic annotation /// 0033218 // amide binding // inferred from electronic annotation /// 0050213 // progesterone 5-alpha-reductase activity // inferred from electronic annotation /// 0070402 // NADPH binding // inferred from electronic annotation","chr5:6633433-6669673 (+) // 90.23 // p15.31"]
["11751688_a_at",-0.0246315,-0.0039010048,0.06361675,-0.0857687,0.0039014816,0.06786442,0.9213586,0.7683819,1.0114061,0.016362334,1.0114061,"up","C6orf72",116254.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr6:149887501-149901564 (+) // 99.9 // q25.1"]
["11747710_a_at",-0.053093433,0.0044698715,-0.008051872,0.11521196,0.014278412,-0.0044698715,0.60204285,0.21431969,-1.0428743,-0.060565326,1.0428743,"down","SMARCD2",6603.0,"0006337 // nucleosome disassembly // inferred from direct assay /// 0006338 // chromatin remodeling // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // non-traceable author statement /// 0016568 // chromatin modification // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0016514 // SWI/SNF complex // inferred from direct assay","0003713 // transcription coactivator activity // non-traceable author statement","chr17:61909851-61920331 (-) // 95.98 // q23.3"]
["11745193_a_at",-0.010714769,0.048266172,0.0045642853,-0.0045642853,0.016729832,-0.11138654,0.6992391,0.3387058,1.0331948,0.04711226,1.0331948,"up","SERPINA12",145264.0,"0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // not recorded /// 0030162 // regulation of proteolysis // not recorded","0005576 // extracellular region // inferred from electronic annotation","0004867 // serine-type endopeptidase inhibitor activity // not recorded /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation","chr14:94953610-94970559 (-) // 99.93 // q32.13"]
["11743930_at",0.044229507,0.14348221,0.14489222,-0.07511473,-0.14091158,-0.044229507,0.20264031,0.010770097,1.1468048,0.19761986,1.1468048,"up","UHRF1BP1L",23074.0,"","","","chr12:100429368-100536646 (-) // 93.1 // q23.1"]
["11749618_x_at",-0.04777336,0.044532537,0.04777336,-0.026398659,-0.040052652,0.026398659,0.79369175,0.49183616,1.0197356,0.028195098,1.0197356,"up","LILRA2",11027.0,"0006952 // defense response // traceable author statement /// 0007165 // signal transduction // traceable author statement","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003823 // antigen binding // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0004872 // receptor activity // traceable author statement","chr19:55084376-55098862 (+) // 74.09 // q13.42"]
["11733073_a_at",0.084869385,0.056571007,0.09402561,-0.09415054,-0.056571007,-0.073340416,0.08459432,6.1211624E-4,1.1120148,0.15317595,1.1120148,"up","DDX21",9188.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005730 // nucleolus // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0004004 // ATP-dependent RNA helicase activity // traceable author statement /// 0004386 // helicase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr10:70715657-70744655 (+) // 99.6 // q22.1"]
["11750486_x_at",-0.010185719,-0.005449295,0.049936295,0.005449295,-0.07912636,0.11163473,0.995138,0.98436594,-1.0008452,-0.001218842,1.0008452,"down","HDAC8",55869.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006333 // chromatin assembly or disassembly // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016568 // chromatin modification // traceable author statement /// 0016568 // chromatin modification // inferred from electronic annotation /// 0016575 // histone deacetylation // traceable author statement /// 0016575 // histone deacetylation // inferred from electronic annotation","0000118 // histone deacetylase complex // traceable author statement /// 0000228 // nuclear chromosome // traceable author statement /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation","0004407 // histone deacetylase activity // traceable author statement /// 0004407 // histone deacetylase activity // inferred from electronic annotation /// 0008134 // transcription factor binding // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0031078 // histone deacetylase activity (H3-K14 specific) // inferred from electronic annotation /// 0032041 // NAD-dependent histone deacetylase activity (H3-K14 specific) // inferred from electronic annotation /// 0032129 // histone deacetylase activity (H3-K9 specific) // inferred from electronic annotation /// 0034739 // histone deacetylase activity (H4-K16 specific) // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046969 // NAD-dependent histone deacetylase activity (H3-K9 specific) // inferred from electronic annotation /// 0046970 // NAD-dependent histone deacetylase activity (H4-K16 specific) // inferred from electronic annotation","chrX:71549661-71792693 (-) // 99.4 // q13.1"]
["11754901_x_at",0.12190199,-0.10759497,-0.026614666,0.026614666,-0.02824068,0.23261118,0.7877809,0.47916758,-1.0578226,-0.081097685,1.0578226,"down","MYOCD",93649.0,"0001560 // regulation of cell growth by extracellular stimulus // inferred from electronic annotation /// 0001570 // vasculogenesis // inferred from electronic annotation /// 0003231 // cardiac ventricle development // inferred from electronic annotation /// 0003257 // positive regulation of transcription from RNA polymerase II promoter involved in myocardial precursor cell differentiation // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0010667 // negative regulation of cardiac muscle cell apoptotic process // inferred from electronic annotation /// 0010832 // negative regulation of myotube differentiation // inferred from electronic annotation /// 0030511 // positive regulation of transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0035051 // cardiac cell differentiation // non-traceable author statement /// 0035065 // regulation of histone acetylation // inferred from sequence or structural similarity /// 0035065 // regulation of histone acetylation // inferred from electronic annotation /// 0042692 // muscle cell differentiation // inferred from electronic annotation /// 0043388 // positive regulation of DNA binding // inferred from electronic annotation /// 0045661 // regulation of myoblast differentiation // inferred from electronic annotation /// 0045736 // negative regulation of cyclin-dependent protein kinase activity // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0045987 // positive regulation of smooth muscle contraction // inferred from direct assay /// 0048286 // lung alveolus development // inferred from electronic annotation /// 0048565 // digestive tract development // inferred from electronic annotation /// 0051145 // smooth muscle cell differentiation // inferred from mutant phenotype /// 0051145 // smooth muscle cell differentiation // inferred from electronic annotation /// 0051150 // regulation of smooth muscle cell differentiation // traceable author statement /// 0051150 // regulation of smooth muscle cell differentiation // inferred from electronic annotation /// 0051152 // positive regulation of smooth muscle cell differentiation // inferred from direct assay /// 0055007 // cardiac muscle cell differentiation // inferred from sequence or structural similarity /// 0055007 // cardiac muscle cell differentiation // inferred from electronic annotation /// 0055012 // ventricular cardiac muscle cell differentiation // inferred from electronic annotation /// 0060065 // uterus development // inferred from electronic annotation /// 0060157 // urinary bladder development // inferred from electronic annotation /// 0071956 // cellular component maintenance at cellular level // inferred from electronic annotation /// 0097070 // ductus arteriosus closure // inferred from electronic annotation /// 2000721 // positive regulation of transcription from RNA polymerase II promoter involved in smooth muscle cell differentiation // inferred from direct assay /// 2000724 // positive regulation of cardiac vascular smooth muscle cell differentiation // inferred from sequence or structural similarity /// 2000727 // positive regulation of cardiac muscle cell differentiation // inferred from direct assay /// 2001015 // negative regulation of skeletal muscle cell differentiation // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0001046 // core promoter sequence-specific DNA binding // inferred from direct assay /// 0001076 // RNA polymerase II transcription factor binding transcription factor activity // inferred from sequence or structural similarity /// 0001076 // RNA polymerase II transcription factor binding transcription factor activity // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from direct assay /// 0035035 // histone acetyltransferase binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0042826 // histone deacetylase binding // inferred from electronic annotation /// 0070412 // R-SMAD binding // inferred from electronic annotation","chr17:12626161-12661623 (+) // 91.6 // p12"]
["11724367_a_at",0.03451729,-0.37238836,-0.1824131,-0.03451729,0.100681305,0.056622982,0.5433501,0.15920517,-1.1601868,-0.21435706,1.1601868,"down","SEMA6D",80031.0,"0006501 // C-terminal protein lipidation // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0016254 // preassembly of GPI anchor in ER membrane // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0030215 // semaphorin receptor binding // inferred from electronic annotation","chr15:48010081-48066418 (+) // 98.29 // q21.1"]
["11751280_x_at",-0.018850803,-0.06473923,-0.24404001,0.19226027,0.20187855,0.018850803,0.36845154,0.053161107,-1.1866325,-0.24687321,1.1866325,"down","SLC38A7",55238.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // inferred from sequence or structural similarity /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0006865 // amino acid transport // inferred from electronic annotation /// 0006868 // glutamine transport // inferred from sequence or structural similarity /// 0015807 // L-amino acid transport // inferred from sequence or structural similarity","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030424 // axon // inferred from sequence or structural similarity /// 0043025 // neuronal cell body // inferred from sequence or structural similarity","0015179 // L-amino acid transmembrane transporter activity // inferred from sequence or structural similarity /// 0015186 // L-glutamine transmembrane transporter activity // inferred from sequence or structural similarity","chr16:58701265-58718674 (-) // 99.1 // q21"]
["11718779_at",-0.04265833,-0.031336784,-0.022197723,0.022197723,0.045488358,0.079080105,0.19679223,0.009898746,-1.0577409,-0.080986306,1.0577409,"down","S100A2",6273.0,"0043542 // endothelial cell migration // inferred from mutant phenotype","","0005509 // calcium ion binding // non-traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation","chr1:153533578-153538326 (-) // 90.02 // q21.3"]
["11747654_a_at",0.28929234,-0.052968264,-0.1084919,-0.05480528,0.060348272,0.052968264,0.95687973,0.86738586,1.0161455,0.023106948,1.0161455,"up","SGK2",10110.0,"0001558 // regulation of cell growth // traceable author statement /// 0006468 // protein phosphorylation // non-traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0006979 // response to oxidative stress // traceable author statement /// 0007243 // intracellular protein kinase cascade // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0032411 // positive regulation of transporter activity // traceable author statement /// 0042127 // regulation of cell proliferation // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0015459 // potassium channel regulator activity // inferred from direct assay /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0017080 // sodium channel regulator activity // non-traceable author statement /// 0017080 // sodium channel regulator activity // traceable author statement","chr20:42193425-42214266 (+) // 76.71 // q13.12"]
["11724867_a_at",0.013559341,-0.31420994,0.005997658,0.10997152,-0.14329672,-0.005997658,0.82407016,0.54981387,-1.0607686,-0.08510998,1.0607686,"down","GAB2",9846.0,"0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from direct assay /// 0007229 // integrin-mediated signaling pathway // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0016477 // cell migration // inferred from electronic annotation /// 0030316 // osteoclast differentiation // inferred from mutant phenotype /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0043306 // positive regulation of mast cell degranulation // inferred from sequence or structural similarity /// 0048015 // phosphatidylinositol-mediated signaling // inferred from sequence or structural similarity","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0005068 // transmembrane receptor protein tyrosine kinase adaptor activity // inferred from direct assay /// 0005070 // SH3/SH2 adaptor activity // inferred from reviewed computational analysis /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0005547 // phosphatidylinositol-3,4,5-trisphosphate binding // inferred from sequence or structural similarity /// 0043325 // phosphatidylinositol-3,4-bisphosphate binding // inferred from sequence or structural similarity","chr11:77926043-78052926 (-) // 94.05 // q14.1"]
["11735760_a_at",-0.14517331,-0.031570196,0.0039231777,0.014092684,-0.0039231777,0.03182292,0.58155656,0.19559874,-1.0508846,-0.07160426,1.0508846,"down","POPDC2",64091.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","","chr3:119360905-119379438 (-) // 87.49 // q13.33"]
["11721297_at",0.06665945,-0.10917091,0.00590086,-0.00590086,0.03480816,-0.06894398,0.9956215,0.9856643,1.0007919,0.0011420286,1.0007919,"up","ABRACL",58527.0,"","","","chr6:139349818-139364689 (+) // 88.25 // q24.1"]
["11761790_x_at",-0.011647224,0.011647463,0.051341772,-0.03840828,-0.13028765,0.14751172,0.92835855,0.7871925,1.0168983,0.024175366,1.0168983,"up","YME1L1",10730.0,"0006508 // proteolysis // inferred from electronic annotation /// 0006515 // misfolded or incompletely synthesized protein catabolic process // inferred from mutant phenotype /// 0006955 // immune response // non-traceable author statement /// 0006968 // cellular defense response // non-traceable author statement /// 0007005 // mitochondrion organization // inferred from mutant phenotype /// 0008283 // cell proliferation // inferred from mutant phenotype /// 0030163 // protein catabolic process // inferred from electronic annotation /// 0031295 // T cell costimulation // traceable author statement /// 0045768 // positive regulation of anti-apoptosis // inferred from mutant phenotype /// 0050776 // regulation of immune response // traceable author statement /// 0050852 // T cell receptor signaling pathway // traceable author statement","0005743 // mitochondrial inner membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // non-traceable author statement /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0042287 // MHC protein binding // non-traceable author statement /// 0042605 // peptide antigen binding // non-traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation","chr14:22564326-22933316 (+) // 91.02 // q11.2"]
["11719894_s_at",-0.11116791,0.0146894455,-0.22262812,0.13104534,-0.0146894455,0.06509304,0.47010887,0.10678747,-1.1226062,-0.16685188,1.1226062,"down","FAM91A1 /// FAM91A2 /// LOC728855","157769 /// 57234 /// 728855","","","","chr8:124780678-124827688 (+) // 98.14 // q24.13"]
["11743656_a_at",-0.08002567,0.06390643,0.02664709,-0.02664709,0.02664709,-0.0544796,0.8846072,0.682746,1.0151333,0.021669129,1.0151333,"up","HPGD",3248.0,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006693 // prostaglandin metabolic process // inferred from direct assay /// 0006693 // prostaglandin metabolic process // inferred from electronic annotation /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from direct assay /// 0007565 // female pregnancy // inferred from direct assay /// 0007567 // parturition // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation /// 0019372 // lipoxygenase pathway // traceable author statement /// 0030728 // ovulation // inferred from sequence or structural similarity /// 0045786 // negative regulation of cell cycle // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0070493 // thrombin receptor signaling pathway // inferred from sequence or structural similarity /// 0097070 // ductus arteriosus closure // inferred from sequence or structural similarity /// 0097070 // ductus arteriosus closure // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // non-traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from direct assay /// 0004957 // prostaglandin E receptor activity // inferred from direct assay /// 0016404 // 15-hydroxyprostaglandin dehydrogenase (NAD+) activity // inferred from direct assay /// 0016404 // 15-hydroxyprostaglandin dehydrogenase (NAD+) activity // inferred from electronic annotation /// 0016404 // 15-hydroxyprostaglandin dehydrogenase (NAD+) activity // non-traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // traceable author statement /// 0051287 // NAD binding // inferred from direct assay /// 0070403 // NAD+ binding // inferred from direct assay","chr4:175411281-175444049 (-) // 97.21 // q34.1"]
["11724666_at",-0.055729866,-0.005498886,0.049554825,0.005498886,0.014731407,-0.09908581,0.8757467,0.6618992,1.0156434,0.02239389,1.0156434,"up","ZC3H4",23211.0,"","","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:47567443-47615847 (-) // 93.73 // q13.32"]
["11717179_a_at",0.02666092,0.08766842,-0.02666092,-0.12417507,0.07212734,-0.045202255,0.7413689,0.40257102,1.0436511,0.061639495,1.0436511,"up","EDC4",23644.0,"0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0043928 // exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay // traceable author statement","0000932 // cytoplasmic mRNA processing body // inferred from direct assay /// 0000932 // cytoplasmic mRNA processing body // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0005515 // protein binding // inferred from physical interaction","chr16:67906925-67918406 (+) // 97.96 // q22.1"]
["11749430_a_at",0.08029175,0.042891502,0.07557869,-0.086361885,-0.042891502,-0.055617332,0.11081357,0.0018486758,1.092685,0.12787753,1.092685,"up","LOC100506538 /// NDUFAF6","100506538 /// 137682","0009058 // biosynthetic process // inferred from electronic annotation /// 0032981 // mitochondrial respiratory chain complex I assembly // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from direct assay /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0016740 // transferase activity // inferred from electronic annotation","chr8:96037260-96089041 (+) // 80.14 // q22.1"]
["AFFX-r2-TagE_at",0.057344913,-0.026423931,0.026423931,0.03779912,-0.12667751,-0.03020811,0.69639516,0.33431762,1.0416065,0.05881042,1.0416065,"up",0.03779912,-0.12667751,-0.03020811,0.057344913,-0.026423931,0.026423931]
["11737626_a_at",-0.0056085587,0.07772112,-0.035886765,-0.01571846,0.011862755,0.0056085587,0.9170219,0.75899595,1.0079968,0.011491056,1.0079968,"up","SETD4",54093.0,"","","","chr21:37406839-37432919 (-) // 89.41 // q22.12"]
["11751495_x_at",-0.037527084,-0.062145233,-0.026382446,0.026382446,0.090434074,0.054883957,0.19403103,0.009635755,-1.0712178,-0.09925181,1.0712178,"down","YAF2",10138.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","0003713 // transcription coactivator activity // inferred from direct assay /// 0003714 // transcription corepressor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:42553703-42632089 (-) // 91.52 // q12"]
["11744260_a_at",-0.044974327,-0.04174137,0.09618759,0.008523941,0.07955074,-0.008523941,0.8862612,0.68641466,-1.0163234,-0.023359615,1.0163234,"down","CD63",967.0,"0002576 // platelet degranulation // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0010633 // negative regulation of epithelial cell migration // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0030855 // epithelial cell differentiation // inferred from electronic annotation /// 0045785 // positive regulation of cell adhesion // inferred from electronic annotation /// 0045807 // positive regulation of endocytosis // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005765 // lysosomal membrane // traceable author statement /// 0005768 // endosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0010008 // endosome membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031088 // platelet dense granule membrane // traceable author statement /// 0031902 // late endosome membrane // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0032403 // protein complex binding // inferred from electronic annotation","chr12:56119229-56123004 (-) // 87.23 // q13.2"]
["11737338_a_at",0.102805614,-0.09100485,-4.4631958E-4,0.0,0.3213129,0.0,0.76475686,0.44078737,-1.0742424,-0.1033195,1.0742424,"down","ZNF527",84503.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:37861947-37883968 (+) // 73.95 // q13.12"]
["11723440_a_at",-0.02304411,0.062312126,0.06126499,-0.0036082268,0.0036082268,-0.023478031,0.61750203,0.23264973,1.029067,0.04133697,1.029067,"up","EPHA4",2043.0,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007411 // axon guidance // inferred from electronic annotation /// 0007628 // adult walking behavior // inferred from electronic annotation /// 0008045 // motor axon guidance // inferred from sequence or structural similarity /// 0008045 // motor axon guidance // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0021957 // corticospinal tract morphogenesis // inferred from sequence or structural similarity /// 0021957 // corticospinal tract morphogenesis // inferred from electronic annotation /// 0032314 // regulation of Rac GTPase activity // inferred from sequence or structural similarity /// 0032314 // regulation of Rac GTPase activity // inferred from electronic annotation /// 0032317 // regulation of Rap GTPase activity // inferred from sequence or structural similarity /// 0032317 // regulation of Rap GTPase activity // inferred from electronic annotation /// 0043507 // positive regulation of JUN kinase activity // inferred from electronic annotation /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0048013 // ephrin receptor signaling pathway // inferred from electronic annotation /// 0048681 // negative regulation of axon regeneration // inferred from sequence or structural similarity /// 0048681 // negative regulation of axon regeneration // inferred from electronic annotation /// 0048710 // regulation of astrocyte differentiation // inferred from sequence or structural similarity /// 0048710 // regulation of astrocyte differentiation // inferred from electronic annotation /// 0050770 // regulation of axonogenesis // inferred from sequence or structural similarity /// 0050770 // regulation of axonogenesis // inferred from electronic annotation /// 0061001 // regulation of dendritic spine morphogenesis // inferred from sequence or structural similarity /// 0061001 // regulation of dendritic spine morphogenesis // inferred from electronic annotation /// 0097155 // fasciculation of sensory neuron axon // inferred from sequence or structural similarity /// 0097155 // fasciculation of sensory neuron axon // inferred from electronic annotation /// 0097156 // fasciculation of motor neuron axon // inferred from sequence or structural similarity /// 0097156 // fasciculation of motor neuron axon // inferred from electronic annotation /// 2001108 // positive regulation of Rho guanyl-nucleotide exchange factor activity // inferred from direct assay","0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from sequence or structural similarity /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030424 // axon // inferred from sequence or structural similarity /// 0030424 // axon // inferred from electronic annotation /// 0030425 // dendrite // inferred from sequence or structural similarity /// 0030425 // dendrite // inferred from electronic annotation /// 0031594 // neuromuscular junction // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from sequence or structural similarity /// 0031901 // early endosome membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005003 // ephrin receptor activity // inferred from electronic annotation /// 0005004 // GPI-linked ephrin receptor activity // inferred from sequence or structural similarity /// 0005004 // GPI-linked ephrin receptor activity // inferred from electronic annotation /// 0005005 // transmembrane-ephrin receptor activity // inferred from sequence or structural similarity /// 0005005 // transmembrane-ephrin receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0042731 // PH domain binding // inferred from physical interaction /// 0046875 // ephrin receptor binding // inferred from electronic annotation /// 0097161 // DH domain binding // inferred from direct assay","chr2:222282754-222438922 (-) // 98.45 // q36.1"]
["11723185_s_at",0.04407978,-0.05072117,0.005457878,-0.14426517,-0.005457878,0.019925117,0.79829043,0.50067896,1.0301622,0.04287153,1.0301622,"up","CNOT6L",246175.0,"0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0000289 // nuclear-transcribed mRNA poly(A) tail shortening // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0004518 // nuclease activity // inferred from electronic annotation /// 0004527 // exonuclease activity // inferred from electronic annotation /// 0004535 // poly(A)-specific ribonuclease activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr4:78634540-78740548 (-) // 98.26 // q21.1"]
["11757701_s_at",0.10224676,-0.06396389,-0.055336475,0.042191505,-0.042191505,0.0866456,0.8599322,0.6277596,-1.024249,-0.034566425,1.024249,"down","VAMP4",8674.0,"0016192 // vesicle-mediated transport // inferred from electronic annotation","0000139 // Golgi membrane // traceable author statement /// 0005764 // lysosome // traceable author statement /// 0005768 // endosome // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr1:171672905-171673480 (-) // 94.96 // q24.3"]
["11733821_a_at",0.011004925,0.081661224,-0.011004925,-0.12228441,0.109751225,-0.10166073,0.7740764,0.45629683,1.0462916,0.06528497,1.0462916,"up","CHRNA2",1135.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // non-traceable author statement /// 0006811 // ion transport // inferred from electronic annotation /// 0007165 // signal transduction // inferred from direct assay /// 0007268 // synaptic transmission // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005892 // acetylcholine-gated channel complex // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004889 // acetylcholine-activated cation-selective channel activity // inferred from direct assay /// 0004889 // acetylcholine-activated cation-selective channel activity // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005230 // extracellular ligand-gated ion channel activity // inferred from electronic annotation /// 0015464 // acetylcholine receptor activity // inferred from direct assay","chr8:27317278-27336813 (-) // 96.06 // p21.2"]
["11761295_a_at",-0.0082399845,0.06371069,0.008239746,-0.015799284,0.012950182,-0.040060043,0.63283175,0.2526951,1.0249403,0.035539813,1.0249403,"up","LDB2",9079.0,"0001942 // hair follicle development // inferred from electronic annotation /// 0010669 // epithelial structure maintenance // inferred from electronic annotation /// 0035019 // somatic stem cell maintenance // inferred from electronic annotation /// 0044089 // positive regulation of cellular component biogenesis // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from electronic annotation","0000989 // transcription factor binding transcription factor activity // inferred from electronic annotation /// 0003712 // transcription cofactor activity // inferred from electronic annotation /// 0003712 // transcription cofactor activity // traceable author statement /// 0019899 // enzyme binding // inferred from electronic annotation /// 0030274 // LIM domain binding // inferred from sequence or structural similarity /// 0030274 // LIM domain binding // inferred from electronic annotation","chr4:16504416-16675936 (-) // 99.91 // p15.32"]
["11726014_at",-0.019876003,-0.05810094,-0.12498641,0.038422346,0.047781467,0.019876003,0.3050242,0.031666446,-1.0740151,-0.10301433,1.0740151,"down","GPC6",10082.0,"","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0031225 // anchored to membrane // inferred from electronic annotation","0043395 // heparan sulfate proteoglycan binding // inferred from electronic annotation","chr13:93879087-95060271 (+) // 99.41 // q31.3"]
["11724219_x_at",0.013954878,-0.013954878,0.023442268,0.023728132,-0.045158148,-0.060941696,0.6554555,0.28085974,1.0247495,0.03527131,1.0247495,"up","GSTA1",2938.0,"0006749 // glutathione metabolic process // inferred from direct assay /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0008152 // metabolic process // inferred by curator /// 0008152 // metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement","0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0004364 // glutathione transferase activity // inferred from direct assay /// 0004364 // glutathione transferase activity // non-traceable author statement /// 0004364 // glutathione transferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr6:52656178-52668765 (-) // 97.98 // p12.2"]
["11759711_a_at",-0.11389065,-0.062542915,-0.066698074,0.062542915,0.1071043,0.13010883,0.11455932,0.0021687595,-1.13364,-0.18096264,1.13364,"down","RBM25",58517.0,"0000381 // regulation of alternative nuclear mRNA splicing, via spliceosome // inferred from direct assay /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from direct assay /// 0008380 // RNA splicing // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003729 // mRNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction","chr14:73525254-73581044 (+) // 90.46 // q24.2"]
["11750753_a_at",-0.115540504,0.013696909,0.07665205,-0.013696909,0.030687332,-0.157511,0.87327117,0.65658873,1.0270048,0.038442977,1.0270048,"up","PRKCQ",5588.0,"0001558 // regulation of cell growth // non-traceable author statement /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006468 // protein phosphorylation // non-traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006509 // membrane protein ectodomain proteolysis // inferred from sequence or structural similarity /// 0006509 // membrane protein ectodomain proteolysis // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006921 // cellular component disassembly involved in apoptotic process // traceable author statement /// 0006954 // inflammatory response // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007568 // aging // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0009408 // response to heat // inferred from electronic annotation /// 0009749 // response to glucose stimulus // inferred from electronic annotation /// 0010389 // regulation of G2/M transition of mitotic cell cycle // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0019229 // regulation of vasoconstriction // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0032740 // positive regulation of interleukin-17 production // inferred from sequence or structural similarity /// 0032740 // positive regulation of interleukin-17 production // inferred from electronic annotation /// 0032753 // positive regulation of interleukin-4 production // inferred from sequence or structural similarity /// 0032753 // positive regulation of interleukin-4 production // inferred from electronic annotation /// 0032868 // response to insulin stimulus // inferred from electronic annotation /// 0035556 // intracellular signal transduction // non-traceable author statement /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0042102 // positive regulation of T cell proliferation // inferred from electronic annotation /// 0042246 // tissue regeneration // inferred from electronic annotation /// 0042346 // positive regulation of NF-kappaB import into nucleus // inferred from electronic annotation /// 0045086 // positive regulation of interleukin-2 biosynthetic process // inferred from electronic annotation /// 0045730 // respiratory burst // inferred from electronic annotation /// 0046627 // negative regulation of insulin receptor signaling pathway // inferred from mutant phenotype /// 0050714 // positive regulation of protein secretion // inferred from electronic annotation /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0050870 // positive regulation of T cell activation // inferred from sequence or structural similarity /// 0050870 // positive regulation of T cell activation // inferred from electronic annotation /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from electronic annotation /// 0051491 // positive regulation of filopodium assembly // inferred from electronic annotation /// 0051496 // positive regulation of stress fiber assembly // inferred from electronic annotation /// 0070233 // negative regulation of T cell apoptotic process // inferred from mutant phenotype /// 0090330 // regulation of platelet aggregation // inferred from sequence or structural similarity /// 0090330 // regulation of platelet aggregation // inferred from electronic annotation /// 2000318 // positive regulation of T-helper 17 type immune response // inferred from sequence or structural similarity /// 2000318 // positive regulation of T-helper 17 type immune response // inferred from electronic annotation /// 2000570 // positive regulation of T-helper 2 cell activation // inferred from sequence or structural similarity /// 2000570 // positive regulation of T-helper 2 cell activation // inferred from electronic annotation","0001772 // immunological synapse // inferred from electronic annotation /// 0005622 // intracellular // non-traceable author statement /// 0005622 // intracellular // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031594 // neuromuscular junction // inferred from electronic annotation /// 0042383 // sarcolemma // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // non-traceable author statement /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004697 // protein kinase C activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // non-traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr10:6469982-6622201 (-) // 100.0 // p15.1"]
["11742607_at",-0.076233625,0.19519734,-0.2089436,0.076233625,-0.12229872,0.25752807,0.83271813,0.5682013,-1.0721308,-0.10048092,1.0721308,"down","OR4S2",219431.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr11:55418379-55419315 (+) // 100.0 // q11"]
["11720826_s_at",-0.42303658,0.09739828,0.009790659,0.10683584,-0.0097904205,-0.0514369,0.8045097,0.51221836,-1.0871005,-0.12048533,1.0871005,"down","JAG1",182.0,"0001525 // angiogenesis // non-traceable author statement /// 0001709 // cell fate determination // non-traceable author statement /// 0002011 // morphogenesis of an epithelial sheet // inferred from electronic annotation /// 0007154 // cell communication // inferred from electronic annotation /// 0007219 // Notch signaling pathway // inferred from mutant phenotype /// 0007219 // Notch signaling pathway // non-traceable author statement /// 0007219 // Notch signaling pathway // traceable author statement /// 0007219 // Notch signaling pathway // inferred from electronic annotation /// 0007220 // Notch receptor processing // traceable author statement /// 0007275 // multicellular organismal development // non-traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // non-traceable author statement /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0030097 // hemopoiesis // non-traceable author statement /// 0030216 // keratinocyte differentiation // non-traceable author statement /// 0030334 // regulation of cell migration // non-traceable author statement /// 0032495 // response to muramyl dipeptide // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // non-traceable author statement /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042491 // auditory receptor cell differentiation // inferred from electronic annotation /// 0045445 // myoblast differentiation // non-traceable author statement /// 0045446 // endothelial cell differentiation // non-traceable author statement /// 0045596 // negative regulation of cell differentiation // inferred from electronic annotation /// 0045599 // negative regulation of fat cell differentiation // inferred from electronic annotation /// 0045639 // positive regulation of myeloid cell differentiation // inferred from electronic annotation /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0045747 // positive regulation of Notch signaling pathway // inferred from electronic annotation /// 0048839 // inner ear development // inferred from electronic annotation /// 0072017 // distal tubule development // inferred from electronic annotation /// 0072070 // loop of Henle development // inferred from electronic annotation /// 0097150 // neuronal stem cell maintenance // inferred from expression pattern /// 2000737 // negative regulation of stem cell differentiation // inferred from mutant phenotype","0005576 // extracellular region // non-traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0016020 // membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from electronic annotation","0005112 // Notch binding // non-traceable author statement /// 0005112 // Notch binding // inferred from electronic annotation /// 0005198 // structural molecule activity // non-traceable author statement /// 0005509 // calcium ion binding // non-traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0008083 // growth factor activity // non-traceable author statement","chr20:10618333-10654755 (-) // 96.82 // p12.2"]
["11734961_a_at",0.06664038,-0.014787674,-0.1706729,-0.14060497,0.014787674,0.017303467,0.99118376,0.9704039,-1.0023841,-0.0034353875,1.0023841,"down","SYNJ2",8871.0,"0007420 // brain development // inferred from electronic annotation /// 0046854 // phosphatidylinositol phosphorylation // inferred from electronic annotation /// 0046855 // inositol phosphate dephosphorylation // inferred from electronic annotation /// 0046856 // phosphatidylinositol dephosphorylation // inferred from electronic annotation /// 0048312 // intracellular distribution of mitochondria // inferred from electronic annotation","0005626 // insoluble fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005881 // cytoplasmic microtubule // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031315 // extrinsic to mitochondrial outer membrane // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0043679 // axon terminus // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0004439 // phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity // inferred from electronic annotation /// 0004445 // inositol-polyphosphate 5-phosphatase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0030165 // PDZ domain binding // inferred from electronic annotation /// 0042578 // phosphoric ester hydrolase activity // inferred from electronic annotation","chr6:158402887-158520204 (+) // 99.72 // q25.3"]
["11738966_at",-0.02021432,0.028774738,-0.14135909,0.0934186,-0.18663502,0.02021432,0.95023274,0.8486399,-1.0139118,-0.01993222,1.0139118,"down","KRTAP25-1",1.00131902E8,"","0005882 // intermediate filament // inferred from electronic annotation","","chr21:31661462-31661832 (-) // 100.0 // q22.11"]
["11747550_a_at",-0.07062483,-0.08671951,0.023386002,0.01747322,-0.01747322,0.021704674,0.6138463,0.22831428,-1.0366204,-0.05188766,1.0366204,"down","RBM23",55147.0,"0006397 // mRNA processing // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation","chr14:23370544-23388385 (-) // 97.32 // q11.2"]
["11761700_a_at",0.05857086,-0.035640717,-0.12659264,0.02610588,0.14694977,-0.026105404,0.6875146,0.3223712,-1.0596131,-0.08353759,1.0596131,"down","RANBP10",57610.0,"0000226 // microtubule cytoskeleton organization // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005881 // cytoplasmic microtubule // inferred from electronic annotation","0005087 // Ran guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0008536 // Ran GTPase binding // inferred from electronic annotation /// 0048487 // beta-tubulin binding // inferred from electronic annotation","chr16:67764801-67840460 (-) // 100.0 // q22.1"]
["11758480_s_at",0.035313606,0.028655052,0.013685226,-0.013685226,-0.022698402,-0.04891491,0.20959504,0.011711353,1.0383677,0.054317478,1.0383677,"up","COG8 /// PDF","64146 /// 84342","0006412 // translation // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0015031 // protein transport // inferred from electronic annotation /// 0018206 // peptidyl-methionine modification // inferred from direct assay /// 0031365 // N-terminal protein amino acid modification // inferred from direct assay","0000139 // Golgi membrane // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0017119 // Golgi transport complex // inferred from direct assay /// 0017119 // Golgi transport complex // non-traceable author statement","0005506 // iron ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042586 // peptide deformylase activity // inferred from direct assay /// 0042586 // peptide deformylase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:69362523-69362986 (-) // 99.14 // q22.1"]
["11750991_s_at",-0.0034680367,0.14933538,0.03247547,0.0034680367,-0.13202477,-0.018702984,0.5405262,0.15673564,1.0781323,0.10853419,1.0781323,"up","UBQLN4",56893.0,"0032434 // regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from sequence or structural similarity /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // inferred from electronic annotation /// 0031595 // nuclear proteasome complex // inferred from direct assay /// 0031597 // cytosolic proteasome complex // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0031593 // polyubiquitin binding // inferred from direct assay","chr1:156006753-156023505 (-) // 97.52 // q22 /// chr3:148703632-148705466 (-) // 96.17 // q24"]
["11722807_a_at",-0.008524895,0.0046720505,0.005130768,-0.0046720505,-0.030046463,0.036208153,0.999226,0.9973285,-1.0000489,-7.051116E-5,1.0000489,"down","WDR54",84058.0,"","","","chr2:74648856-74652882 (+) // 90.46 // p13.1"]
["11720615_a_at",-0.05805397,-0.02084732,-0.060523987,0.044751167,0.02084732,0.02508068,0.17152515,0.006589441,-1.054604,-0.07670145,1.054604,"down","TUBG2",27175.0,"0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0007017 // microtubule-based process // inferred from electronic annotation /// 0051258 // protein polymerization // inferred from electronic annotation","0000242 // pericentriolar material // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0005874 // microtubule // inferred from electronic annotation /// 0005876 // spindle microtubule // inferred from electronic annotation /// 0005881 // cytoplasmic microtubule // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // traceable author statement /// 0043234 // protein complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005198 // structural molecule activity // traceable author statement /// 0005525 // GTP binding // inferred from electronic annotation","chr17:40811265-40819024 (+) // 93.62 // q21.2"]
["11753838_x_at",-0.1073246,0.094584465,0.0019140244,-0.0019140244,-0.090872765,0.03101015,0.939099,0.8171099,1.0118417,0.016983537,1.0118417,"up","SNN",8303.0,"0006950 // response to stress // traceable author statement /// 0009628 // response to abiotic stimulus // traceable author statement","0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr16:11769915-11770179 (+) // 99.24 // p13.13"]
["11758330_x_at",0.0050201416,-0.032693863,0.033164978,-0.0050201416,0.07274437,-0.03355217,0.9363405,0.8091242,-1.0066487,-0.009560242,1.0066487,"down","SDHD",6392.0,"0006099 // tricarboxylic acid cycle // inferred from direct assay /// 0006099 // tricarboxylic acid cycle // inferred from electronic annotation /// 0006099 // tricarboxylic acid cycle // traceable author statement /// 0006121 // mitochondrial electron transport, succinate to ubiquinone // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0022900 // electron transport chain // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005739 // mitochondrion // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005740 // mitochondrial envelope // traceable author statement /// 0005740 // mitochondrial envelope // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from direct assay /// 0005743 // mitochondrial inner membrane // inferred from sequence or structural similarity /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005749 // mitochondrial respiratory chain complex II // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000104 // succinate dehydrogenase activity // inferred from direct assay /// 0005506 // iron ion binding // inferred from electronic annotation /// 0009055 // electron carrier activity // traceable author statement /// 0020037 // heme binding // inferred from sequence or structural similarity /// 0020037 // heme binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0048039 // ubiquinone binding // inferred from sequence or structural similarity","chr11:111959600-111966003 (+) // 85.6 // q23.1"]
["11733749_s_at",-0.051632643,-0.0850029,0.17282152,-0.094517946,0.051632643,0.05223632,0.9780343,0.92916644,1.0062195,0.008945063,1.0062195,"up","TNNI2",7136.0,"0003009 // skeletal muscle contraction // inferred from direct assay /// 0030049 // muscle filament sliding // traceable author statement /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005861 // troponin complex // inferred from direct assay","0003779 // actin binding // inferred from direct assay /// 0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0031014 // troponin T binding // inferred from physical interaction","chr11:1861630-1862910 (+) // 86.25 // p15.5"]
["11763665_at",-0.0543952,-0.16844416,-0.39275074,0.40961123,0.0543952,0.38322163,0.30740505,0.03228595,-1.4021163,-0.48760602,1.4021163,"down","CA6",765.0,"0006730 // one-carbon metabolic process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0004089 // carbonate dehydratase activity // inferred from electronic annotation /// 0004089 // carbonate dehydratase activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:8994479-9023668 (+) // 39.01 // p36.23"]
["11717465_s_at",0.029387474,0.031858444,0.19309425,-0.07478428,-0.029387474,-0.1278534,0.37801513,0.056989077,1.1189315,0.16212176,1.1189315,"up","LXN",56925.0,"0043086 // negative regulation of catalytic activity // inferred from electronic annotation /// 0050965 // detection of temperature stimulus involved in sensory perception of pain // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0004857 // enzyme inhibitor activity // inferred from electronic annotation /// 0008191 // metalloendopeptidase inhibitor activity // inferred from electronic annotation","chr3:158383817-158390482 (-) // 96.82 // q25.32"]
["11763698_x_at",0.038092136,-0.041641712,0.033127785,-0.026289463,0.026289463,-0.061563015,0.76962423,0.44955406,1.0212814,0.030380381,1.0212814,"up","MBIP",51562.0,"0000173 // inactivation of MAPK activity involved in osmosensory signaling pathway // traceable author statement /// 0043966 // histone H3 acetylation // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005671 // Ada2/Gcn5/Ada3 transcription activator complex // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0004860 // protein kinase inhibitor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction","chr14:36767769-36789794 (-) // 92.22 // q13.3"]
["11754552_a_at",0.013073921,0.015828133,-7.171631E-4,-0.030817986,-0.06387234,7.171631E-4,0.46343693,0.10297709,1.0286266,0.04071931,1.0286266,"up","MRPL27",51264.0,"0006412 // translation // non-traceable author statement /// 0006412 // translation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005762 // mitochondrial large ribosomal subunit // non-traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003735 // structural constituent of ribosome // non-traceable author statement /// 0003735 // structural constituent of ribosome // inferred from electronic annotation","chr17:48445227-48450571 (-) // 79.52 // q21.33"]
["11731748_a_at",-0.0056786537,0.17586899,0.0056786537,0.14295149,-0.020981312,-0.17498398,0.80998194,0.52240926,1.0543065,0.07629435,1.0543065,"up","HEPACAM /// HEPN1","220296 /// 641654","0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0040008 // regulation of growth // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030424 // axon // inferred from direct assay","","chr11:124789088-124806308 (-) // 93.52 // q24.2"]
["11749264_a_at",0.052410364,-0.06677461,0.025316,0.060175896,-0.025315762,-0.19175911,0.81609225,0.53389394,1.0395436,0.055950306,1.0395436,"up","DDX25",29118.0,"0006200 // ATP catabolic process // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // inferred from sequence or structural similarity /// 0006406 // mRNA export from nucleus // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from sequence or structural similarity /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0007286 // spermatid development // inferred from sequence or structural similarity /// 0007286 // spermatid development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0051028 // mRNA transport // inferred from electronic annotation","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0033391 // chromatoid body // inferred from sequence or structural similarity /// 0033391 // chromatoid body // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003724 // RNA helicase activity // inferred from electronic annotation /// 0004004 // ATP-dependent RNA helicase activity // inferred from sequence or structural similarity /// 0004004 // ATP-dependent RNA helicase activity // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from sequence or structural similarity /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from electronic annotation","chr11:125774403-125791355 (+) // 99.53 // q24.2"]
["11719912_a_at",0.09369278,-0.05772066,0.046640396,-0.012609959,-0.11615229,0.0126104355,0.6922345,0.32869294,1.0469952,0.06625478,1.0469952,"up","KDM1B",221656.0,"0006349 // regulation of gene expression by genetic imprinting // inferred from electronic annotation /// 0006349 // regulation of gene expression by genetic imprinting // inferred from sequence or structural similarity /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0034720 // histone H3-K4 demethylation // inferred from sequence or structural similarity /// 0034720 // histone H3-K4 demethylation // inferred from electronic annotation /// 0043046 // DNA methylation involved in gamete generation // inferred from electronic annotation /// 0044030 // regulation of DNA methylation // inferred from electronic annotation /// 0044030 // regulation of DNA methylation // inferred from sequence or structural similarity /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from sequence or structural similarity","0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0034648 // histone demethylase activity (H3-dimethyl-K4 specific) // inferred from electronic annotation /// 0034648 // histone demethylase activity (H3-dimethyl-K4 specific) // inferred from sequence or structural similarity /// 0034649 // histone demethylase activity (H3-monomethyl-K4 specific) // inferred from electronic annotation /// 0034649 // histone demethylase activity (H3-monomethyl-K4 specific) // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050660 // flavin adenine dinucleotide binding // inferred from electronic annotation","chr6:18155618-18224085 (+) // 97.56 // p22.3"]
["11723350_a_at",-0.051449776,-0.019003868,-0.06272316,0.10117054,0.019003868,0.14044237,0.2844622,0.026172487,-1.0952532,-0.13126446,1.0952532,"down","ABCA3",21.0,"0006200 // ATP catabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006810 // transport // traceable author statement /// 0042493 // response to drug // traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0005624 // membrane fraction // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0097208 // alveolar lamellar body // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0005215 // transporter activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0005524 // ATP binding // traceable author statement /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0042626 // ATPase activity, coupled to transmembrane movement of substances // traceable author statement","chr16:2325877-2390747 (-) // 97.64 // p13.3"]
["11717548_a_at",0.016744614,-0.027068138,-0.053804398,0.041267395,0.024133682,-0.016744614,0.6182284,0.23352727,-1.0264013,-0.037594877,1.0264013,"down","BTBD10",84280.0,"","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","","chr11:13409568-13484838 (-) // 95.12 // p15.2"]
["11717700_at",-2.0980835E-4,-0.0052871704,-0.0796628,0.07094574,0.083767414,2.0980835E-4,0.447337,0.093616076,-1.0570383,-0.08002766,1.0570383,"down","DCAF8",50717.0,"0016567 // protein ubiquitination // inferred by curator /// 0016567 // protein ubiquitination // inferred from electronic annotation","0005777 // peroxisome // inferred from electronic annotation /// 0080008 // CUL4-RING ubiquitin ligase complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr1:160185156-160232258 (-) // 94.8 // q23.2"]
["11757070_x_at",0.0044136047,-0.017396927,0.09775162,-0.0044136047,0.0685215,-0.016471863,0.9306005,0.79325294,1.0086163,0.012377486,1.0086163,"up","LLPH /// LOC100506562","100506562 /// 84298","","","","chr2:222808882-222809530 (+) // 96.23 // q36.1 /// chr22:42072546-42073161 (-) // 90.95 // q13.2"]
["11725822_a_at",-0.26309347,0.0043172836,0.06026125,0.22538662,-0.0043172836,-0.040870667,0.73057806,0.38649845,-1.0914438,-0.12623781,1.0914438,"down","JPH1",56704.0,"0007517 // muscle organ development // inferred from electronic annotation /// 0060314 // regulation of ryanodine-sensitive calcium-release channel activity // traceable author statement /// 0060402 // calcium ion transport into cytosol // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0014701 // junctional sarcoplasmic reticulum membrane // traceable author statement /// 0014701 // junctional sarcoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016529 // sarcoplasmic reticulum // inferred from electronic annotation /// 0030018 // Z disc // inferred from electronic annotation /// 0030314 // junctional membrane complex // non-traceable author statement /// 0030314 // junctional membrane complex // inferred from electronic annotation /// 0033017 // sarcoplasmic reticulum membrane // inferred from electronic annotation","0008307 // structural constituent of muscle // inferred from electronic annotation","chr8:75146934-75233678 (-) // 98.24 // q21.11"]
["11735455_at",-0.15440083,-0.006020546,0.006020546,0.033703327,0.075036526,-0.035132885,0.65401095,0.27924433,-1.0540934,-0.07600265,1.0540934,"down","IFT81",28981.0,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from sequence or structural similarity /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation","0009434 // microtubule-based flagellum // inferred from sequence or structural similarity /// 0030992 // intraflagellar transport particle B // inferred from sequence or structural similarity","","chr12:110562139-110606985 (+) // 64.85 // q24.11"]
["11727708_a_at",-0.10191059,0.029939175,0.18097186,0.19217515,-0.029939175,-0.23443222,0.89347357,0.7037811,1.042754,0.06039892,1.042754,"up","C6orf201",404220.0,"0006508 // proteolysis // inferred from electronic annotation","","0000166 // nucleotide binding // inferred from electronic annotation /// 0004190 // aspartic-type endopeptidase activity // inferred from electronic annotation","chr6:4079439-4131185 (+) // 93.21 // p25.2"]
["11747470_a_at",-0.046339035,0.035042763,-0.02909565,-0.008821487,0.09613323,0.008821487,0.6915485,0.3273125,-1.0320468,-0.045508385,1.0320468,"down","ZNF512",84450.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:27805872-27845958 (+) // 96.61 // p23.3"]
["11731880_at",-0.1175046,-0.0031478405,0.0031478405,-0.051398993,0.01250267,0.16695619,0.7006848,0.34069407,-1.0583779,-0.08185479,1.0583779,"down","NLRP1",22861.0,"0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from direct assay /// 0006917 // induction of apoptosis // non-traceable author statement /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // non-traceable author statement /// 0006952 // defense response // inferred from electronic annotation /// 0032495 // response to muramyl dipeptide // inferred from sequence or structural similarity /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0042742 // defense response to bacterium // inferred from sequence or structural similarity /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0050718 // positive regulation of interleukin-1 beta secretion // inferred from sequence or structural similarity /// 0050727 // regulation of inflammatory response // inferred by curator /// 0051402 // neuron apoptotic process // inferred from direct assay","0005622 // intracellular // inferred by curator /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0072558 // NLRP1 inflammasome complex // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0008656 // cysteine-type endopeptidase activator activity involved in apoptotic process // non-traceable author statement /// 0019899 // enzyme binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from physical interaction","chr17:5404340-5487832 (-) // 94.94 // p13.2"]
["11758111_s_at",0.045749664,-0.0020680428,0.12598515,0.0020685196,-0.043149948,-0.03344345,0.47582346,0.11033671,1.0580423,0.08139729,1.0580423,"up","FOXC1",2296.0,"0001501 // skeletal system development // inferred from electronic annotation /// 0001503 // ossification // not recorded /// 0001503 // ossification // inferred from electronic annotation /// 0001541 // ovarian follicle development // not recorded /// 0001541 // ovarian follicle development // inferred from electronic annotation /// 0001568 // blood vessel development // inferred from electronic annotation /// 0001570 // vasculogenesis // not recorded /// 0001654 // eye development // inferred from direct assay /// 0001654 // eye development // inferred from electronic annotation /// 0001656 // metanephros development // not recorded /// 0001657 // ureteric bud development // not recorded /// 0001657 // ureteric bud development // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001756 // somitogenesis // not recorded /// 0001756 // somitogenesis // inferred from electronic annotation /// 0001822 // kidney development // inferred from electronic annotation /// 0001945 // lymph vessel development // inferred from electronic annotation /// 0001946 // lymphangiogenesis // not recorded /// 0001974 // blood vessel remodeling // not recorded /// 0001974 // blood vessel remodeling // inferred from electronic annotation /// 0003007 // heart morphogenesis // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006916 // anti-apoptosis // not recorded /// 0006916 // anti-apoptosis // inferred from electronic annotation /// 0007219 // Notch signaling pathway // not recorded /// 0007219 // Notch signaling pathway // inferred from electronic annotation /// 0007420 // brain development // not recorded /// 0007420 // brain development // inferred from electronic annotation /// 0007507 // heart development // inferred from direct assay /// 0007507 // heart development // inferred from electronic annotation /// 0008354 // germ cell migration // not recorded /// 0008354 // germ cell migration // inferred from electronic annotation /// 0014032 // neural crest cell development // inferred from electronic annotation /// 0014034 // neural crest cell fate commitment // not recorded /// 0030199 // collagen fibril organization // not recorded /// 0030199 // collagen fibril organization // inferred from electronic annotation /// 0030203 // glycosaminoglycan metabolic process // not recorded /// 0030203 // glycosaminoglycan metabolic process // inferred from electronic annotation /// 0032808 // lacrimal gland development // not recorded /// 0032808 // lacrimal gland development // inferred from electronic annotation /// 0035050 // embryonic heart tube development // not recorded /// 0035050 // embryonic heart tube development // inferred from electronic annotation /// 0042475 // odontogenesis of dentin-containing tooth // inferred from mutant phenotype /// 0043010 // camera-type eye development // not recorded /// 0043010 // camera-type eye development // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // non-traceable author statement /// 0045930 // negative regulation of mitotic cell cycle // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // not recorded /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046620 // regulation of organ growth // not recorded /// 0046620 // regulation of organ growth // inferred from electronic annotation /// 0048010 // vascular endothelial growth factor receptor signaling pathway // not recorded /// 0048010 // vascular endothelial growth factor receptor signaling pathway // inferred from electronic annotation /// 0048341 // paraxial mesoderm formation // inferred from electronic annotation /// 0048343 // paraxial mesodermal cell fate commitment // not recorded /// 0048762 // mesenchymal cell differentiation // inferred from electronic annotation /// 0048844 // artery morphogenesis // not recorded /// 0048844 // artery morphogenesis // inferred from electronic annotation /// 0050880 // regulation of blood vessel size // not recorded /// 0050880 // regulation of blood vessel size // inferred from electronic annotation /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // not recorded /// 0055010 // ventricular cardiac muscle tissue morphogenesis // not recorded /// 0055010 // ventricular cardiac muscle tissue morphogenesis // inferred from electronic annotation /// 0060038 // cardiac muscle cell proliferation // not recorded /// 0060038 // cardiac muscle cell proliferation // inferred from electronic annotation","0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // not recorded /// 0005720 // nuclear heterochromatin // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // not recorded /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // not recorded /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008301 // DNA binding, bending // inferred from direct assay /// 0031490 // chromatin DNA binding // not recorded /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from sequence or structural similarity /// 0044212 // transcription regulatory region DNA binding // inferred from electronic annotation","chr6:1613226-1614127 (+) // 99.34 // p25.3"]
["11755725_a_at",0.004877329,-1.5640259E-4,0.004877329,1.5640259E-4,-0.0868659,-0.17429423,0.52905184,0.14792687,1.0645182,0.09020063,1.0645182,"up","KIR3DX1",90011.0,"","0005576 // extracellular region // inferred from electronic annotation","","chr19:55043908-55055024 (+) // 98.55 // q13.42"]
["11732710_a_at",0.18504429,-0.07627249,0.07632804,-0.12512016,-0.19090247,0.07627249,0.6457934,0.26911652,1.1031406,0.14161667,1.1031406,"up","FAM46D",169966.0,"","","","chrX:79675945-79700808 (+) // 98.54 // q21.1"]
["11763995_at",-0.12127352,0.2238431,0.09856081,-0.058716297,-0.02660799,0.02660799,0.7705799,0.4513232,1.0618762,0.08661555,1.0618762,"up","","","","","","chr22:30882823-30883513 (-) // 68.82 // q12.2"]
["11721715_s_at",-0.029434204,-0.05866766,0.032758236,0.012073517,-0.012073517,0.15970802,0.66975105,0.2987333,-1.0509427,-0.07168396,1.0509427,"down","ATRX",546.0,"0006281 // DNA repair // inferred from electronic annotation /// 0006281 // DNA repair // traceable author statement /// 0006306 // DNA methylation // traceable author statement /// 0006310 // DNA recombination // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation /// 0032508 // DNA duplex unwinding // traceable author statement","0000228 // nuclear chromosome // inferred from electronic annotation /// 0000792 // heterochromatin // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005720 // nuclear heterochromatin // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003678 // DNA helicase activity // traceable author statement /// 0003682 // chromatin binding // inferred from electronic annotation /// 0004386 // helicase activity // traceable author statement /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070087 // chromo shadow domain binding // inferred from physical interaction","chrX:76760357-77041755 (-) // 97.35 // q21.1"]
["11762770_at",-0.11941433,0.088997364,-0.11227417,-0.050932407,0.050932407,0.070212364,0.7484818,0.41419333,-1.0504211,-0.07096782,1.0504211,"down","RAPGEF1",2889.0,"0000186 // activation of MAPKK activity // traceable author statement /// 0001568 // blood vessel development // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0016337 // cell-cell adhesion // inferred from electronic annotation /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005768 // endosome // traceable author statement /// 0005829 // cytosol // traceable author statement","0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0017124 // SH3 domain binding // inferred from electronic annotation","chr9:134551623-134553049 (-) // 76.44 // q34.13"]
["11717406_a_at",0.014014244,0.10100508,-0.02399826,0.17510414,-0.072226524,-0.014014244,0.9979655,0.99352616,1.0004987,7.192241E-4,1.0004987,"up","FAM120AOS",158293.0,"","","","chr9:96208554-96215874 (-) // 86.74 // q22.31"]
["11720648_a_at",-0.005709648,-0.0059280396,0.005709648,0.060204506,-0.019623756,0.018321037,0.74422896,0.40749907,-1.0150917,-0.021610001,1.0150917,"down","IP6K2",51447.0,"0016310 // phosphorylation // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0030308 // negative regulation of cell growth // inferred from mutant phenotype /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0046854 // phosphatidylinositol phosphorylation // inferred from direct assay /// 0060337 // type I interferon-mediated signaling pathway // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0045111 // intermediate filament cytoskeleton // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0000832 // inositol hexakisphosphate 5-kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008440 // inositol-1,4,5-trisphosphate 3-kinase activity // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0052723 // inositol hexakisphosphate 1-kinase activity // inferred from electronic annotation /// 0052724 // inositol hexakisphosphate 3-kinase activity // inferred from electronic annotation","chr3:48725435-48754711 (-) // 97.51 // p21.31"]
["11745913_s_at",0.16855192,0.007931232,0.06970024,-0.20230389,-0.08312702,-0.007931232,0.40758198,0.070472375,1.1327649,0.1798485,1.1327649,"up","GOLGA8A /// GOLGA8B /// LOC100508892","100508892 /// 23015 /// 440270","0006810 // transport // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation","","chr15:34671271-34846157 (-) // 85.47 // q14"]
["11747931_a_at",-0.22380495,-0.120856285,0.18331385,0.102884054,0.042330503,-0.042330503,0.8154974,0.5330531,-1.0629525,-0.08807715,1.0629525,"down","LEF1",51176.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001569 // patterning of blood vessels // not recorded /// 0001569 // patterning of blood vessels // inferred from electronic annotation /// 0001649 // osteoblast differentiation // inferred from expression pattern /// 0001755 // neural crest cell migration // not recorded /// 0001756 // somitogenesis // not recorded /// 0001756 // somitogenesis // inferred from electronic annotation /// 0001822 // kidney development // inferred from electronic annotation /// 0001837 // epithelial to mesenchymal transition // inferred from sequence or structural similarity /// 0001837 // epithelial to mesenchymal transition // inferred from electronic annotation /// 0001944 // vasculature development // inferred from electronic annotation /// 0002040 // sprouting angiogenesis // not recorded /// 0002040 // sprouting angiogenesis // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006917 // induction of apoptosis // not recorded /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007420 // brain development // not recorded /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0010226 // response to lithium ion // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from direct assay /// 0010718 // positive regulation of epithelial to mesenchymal transition // inferred from mutant phenotype /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0016055 // Wnt receptor signaling pathway // inferred from direct assay /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0016202 // regulation of striated muscle tissue development // not recorded /// 0021542 // dentate gyrus development // not recorded /// 0021542 // dentate gyrus development // inferred from electronic annotation /// 0021766 // hippocampus development // inferred from electronic annotation /// 0021854 // hypothalamus development // not recorded /// 0021861 // forebrain radial glial cell differentiation // not recorded /// 0021861 // forebrain radial glial cell differentiation // inferred from electronic annotation /// 0021873 // forebrain neuroblast division // not recorded /// 0021873 // forebrain neuroblast division // inferred from electronic annotation /// 0021879 // forebrain neuron differentiation // not recorded /// 0021943 // formation of radial glial scaffolds // not recorded /// 0021943 // formation of radial glial scaffolds // inferred from electronic annotation /// 0022008 // neurogenesis // not recorded /// 0022407 // regulation of cell-cell adhesion // inferred from electronic annotation /// 0022408 // negative regulation of cell-cell adhesion // inferred from direct assay /// 0022409 // positive regulation of cell-cell adhesion // inferred from direct assay /// 0030111 // regulation of Wnt receptor signaling pathway // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030223 // neutrophil differentiation // inferred from mutant phenotype /// 0030307 // positive regulation of cell growth // inferred from mutant phenotype /// 0030326 // embryonic limb morphogenesis // not recorded /// 0030326 // embryonic limb morphogenesis // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0030335 // positive regulation of cell migration // inferred from mutant phenotype /// 0030509 // BMP signaling pathway // not recorded /// 0030509 // BMP signaling pathway // inferred from electronic annotation /// 0030854 // positive regulation of granulocyte differentiation // inferred from direct assay /// 0030879 // mammary gland development // not recorded /// 0030879 // mammary gland development // inferred from electronic annotation /// 0031100 // organ regeneration // inferred from electronic annotation /// 0032696 // negative regulation of interleukin-13 production // inferred from direct assay /// 0032713 // negative regulation of interleukin-4 production // inferred from direct assay /// 0032714 // negative regulation of interleukin-5 production // inferred from direct assay /// 0033153 // T cell receptor V(D)J recombination // inferred from electronic annotation /// 0042100 // B cell proliferation // not recorded /// 0042100 // B cell proliferation // inferred from electronic annotation /// 0042475 // odontogenesis of dentin-containing tooth // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from mutant phenotype /// 0043392 // negative regulation of DNA binding // inferred from direct assay /// 0043586 // tongue development // inferred from electronic annotation /// 0043588 // skin development // inferred from electronic annotation /// 0043923 // positive regulation by host of viral transcription // inferred from direct assay /// 0043966 // histone H3 acetylation // inferred from mutant phenotype /// 0043967 // histone H4 acetylation // inferred from mutant phenotype /// 0045063 // T-helper 1 cell differentiation // inferred from sequence or structural similarity /// 0045063 // T-helper 1 cell differentiation // inferred from electronic annotation /// 0045843 // negative regulation of striated muscle tissue development // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046632 // alpha-beta T cell differentiation // not recorded /// 0046632 // alpha-beta T cell differentiation // inferred from electronic annotation /// 0048069 // eye pigmentation // not recorded /// 0048341 // paraxial mesoderm formation // not recorded /// 0048341 // paraxial mesoderm formation // inferred from electronic annotation /// 0048468 // cell development // inferred from electronic annotation /// 0048699 // generation of neurons // not recorded /// 0048747 // muscle fiber development // not recorded /// 0050909 // sensory perception of taste // inferred from electronic annotation /// 0060021 // palate development // inferred from sequence or structural similarity /// 0060021 // palate development // inferred from electronic annotation /// 0060033 // anatomical structure regression // inferred from electronic annotation /// 0060070 // canonical Wnt receptor signaling pathway // inferred from direct assay /// 0060070 // canonical Wnt receptor signaling pathway // inferred from mutant phenotype /// 0060325 // face morphogenesis // not recorded /// 0060325 // face morphogenesis // inferred from electronic annotation /// 0060326 // cell chemotaxis // inferred from direct assay /// 0060561 // apoptotic process involved in morphogenesis // not recorded /// 0060561 // apoptotic process involved in morphogenesis // inferred from electronic annotation /// 0060710 // chorio-allantoic fusion // not recorded /// 0060710 // chorio-allantoic fusion // inferred from electronic annotation /// 0061153 // trachea gland development // not recorded /// 0061153 // trachea gland development // inferred from electronic annotation /// 0071353 // cellular response to interleukin-4 // inferred from direct assay /// 0071864 // positive regulation of cell proliferation in bone marrow // inferred from mutant phenotype /// 0071866 // negative regulation of apoptotic process in bone marrow // inferred from mutant phenotype /// 0071895 // odontoblast differentiation // not recorded /// 0071899 // negative regulation of estrogen receptor binding // inferred from direct assay /// 0090068 // positive regulation of cell cycle process // inferred from direct assay /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from mutant phenotype","0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from direct assay /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0032993 // protein-DNA complex // inferred from direct assay","0003677 // DNA binding // inferred from sequence or structural similarity /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // not recorded /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // not recorded /// 0005515 // protein binding // inferred from physical interaction /// 0008013 // beta-catenin binding // inferred from physical interaction /// 0008013 // beta-catenin binding // traceable author statement /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0008301 // DNA binding, bending // inferred from sequence or structural similarity /// 0008301 // DNA binding, bending // inferred from electronic annotation /// 0030284 // estrogen receptor activity // inferred from direct assay /// 0030331 // estrogen receptor binding // inferred from direct assay /// 0035326 // enhancer binding // inferred from direct assay /// 0042393 // histone binding // inferred from physical interaction /// 0043027 // cysteine-type endopeptidase inhibitor activity involved in apoptotic process // inferred from mutant phenotype /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from electronic annotation /// 0045295 // gamma-catenin binding // inferred from physical interaction /// 0070016 // armadillo repeat domain binding // inferred from physical interaction /// 0070742 // C2H2 zinc finger domain binding // inferred from physical interaction","chr4:108969794-109088465 (-) // 98.51 // q25"]
["11744921_a_at",0.08276081,6.26564E-4,-0.0015363693,-0.028725624,0.059961796,-6.26564E-4,0.88270015,0.677449,1.0119096,0.017080417,1.0119096,"up","SLC43A1",8501.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006865 // amino acid transport // traceable author statement /// 0006865 // amino acid transport // inferred from electronic annotation /// 0015804 // neutral amino acid transport // inferred from direct assay /// 0015807 // L-amino acid transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0015175 // neutral amino acid transmembrane transporter activity // inferred from direct assay /// 0015179 // L-amino acid transmembrane transporter activity // inferred from electronic annotation","chr11:57252009-57282358 (-) // 98.91 // q12.1"]
["11737014_s_at",-0.025027752,-0.10529065,-0.07403183,0.16431904,0.025027752,0.091682434,0.28134462,0.025387071,-1.1186767,-0.1617931,1.1186767,"down","HOXD8",3234.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008595 // anterior/posterior axis specification, embryo // non-traceable author statement /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0048705 // skeletal system morphogenesis // inferred from electronic annotation","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr2:176994467-176997422 (+) // 89.88 // q31.1"]
["11736052_at",0.049384117,-0.049384117,-0.109769344,0.17144012,-0.13138485,0.049384117,0.8191953,0.5408563,-1.0471027,-0.066402934,1.0471027,"down","EEF1A1 /// LOC100653236","100653236 /// 1915","0006184 // GTP catabolic process // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006414 // translational elongation // traceable author statement /// 0006414 // translational elongation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005853 // eukaryotic translation elongation factor 1 complex // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003746 // translation elongation factor activity // inferred from electronic annotation /// 0003746 // translation elongation factor activity // traceable author statement /// 0003924 // GTPase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0005525 // GTP binding // traceable author statement /// 0019901 // protein kinase binding // inferred from physical interaction","chr6:74225472-74230794 (-) // 90.22 // q13"]
["11752095_a_at",-0.11942792,0.11593866,0.0047962666,-0.0047962666,-0.13609624,0.049245596,0.9096544,0.74102825,1.0217092,0.030984638,1.0217092,"up","PTPRC",5788.0,"0000187 // activation of MAPK activity // inferred from electronic annotation /// 0001915 // negative regulation of T cell mediated cytotoxicity // inferred from sequence or structural similarity /// 0001916 // positive regulation of T cell mediated cytotoxicity // inferred from electronic annotation /// 0001960 // negative regulation of cytokine-mediated signaling pathway // inferred from sequence or structural similarity /// 0002244 // hemopoietic progenitor cell differentiation // inferred from mutant phenotype /// 0002378 // immunoglobulin biosynthetic process // inferred from mutant phenotype /// 0002711 // positive regulation of T cell mediated immunity // inferred from electronic annotation /// 0002923 // regulation of humoral immune response mediated by circulating immunoglobulin // inferred from electronic annotation /// 0002925 // positive regulation of humoral immune response mediated by circulating immunoglobulin // inferred from electronic annotation /// 0006469 // negative regulation of protein kinase activity // inferred from direct assay /// 0006469 // negative regulation of protein kinase activity // inferred from sequence or structural similarity /// 0006470 // protein dephosphorylation // inferred from sequence or structural similarity /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0006933 // negative regulation of cell adhesion involved in substrate-bound cell migration // inferred from mutant phenotype /// 0007159 // leukocyte cell-cell adhesion // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0010332 // response to gamma radiation // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from sequence or structural similarity /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0030183 // B cell differentiation // inferred from electronic annotation /// 0030217 // T cell differentiation // inferred from sequence or structural similarity /// 0030890 // positive regulation of B cell proliferation // inferred from mutant phenotype /// 0030890 // positive regulation of B cell proliferation // inferred from electronic annotation /// 0031953 // negative regulation of protein autophosphorylation // inferred from electronic annotation /// 0033261 // regulation of S phase // inferred from mutant phenotype /// 0034113 // heterotypic cell-cell adhesion // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from direct assay /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation /// 0042098 // T cell proliferation // inferred from electronic annotation /// 0042100 // B cell proliferation // inferred from sequence or structural similarity /// 0042102 // positive regulation of T cell proliferation // inferred from sequence or structural similarity /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043410 // positive regulation of MAPK cascade // inferred from electronic annotation /// 0045059 // positive thymic T cell selection // inferred from electronic annotation /// 0045060 // negative thymic T cell selection // inferred from electronic annotation /// 0045577 // regulation of B cell differentiation // inferred from electronic annotation /// 0045582 // positive regulation of T cell differentiation // inferred from electronic annotation /// 0045588 // positive regulation of gamma-delta T cell differentiation // inferred from electronic annotation /// 0045860 // positive regulation of protein kinase activity // non-traceable author statement /// 0046641 // positive regulation of alpha-beta T cell proliferation // inferred from electronic annotation /// 0048304 // positive regulation of isotype switching to IgG isotypes // inferred from electronic annotation /// 0048539 // bone marrow development // inferred from mutant phenotype /// 0048864 // stem cell development // inferred from mutant phenotype /// 0050732 // negative regulation of peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0050852 // T cell receptor signaling pathway // inferred from direct assay /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0050852 // T cell receptor signaling pathway // inferred from electronic annotation /// 0050853 // B cell receptor signaling pathway // inferred from sequence or structural similarity /// 0050853 // B cell receptor signaling pathway // inferred from electronic annotation /// 0050855 // regulation of B cell receptor signaling pathway // inferred from electronic annotation /// 0050857 // positive regulation of antigen receptor-mediated signaling pathway // inferred from sequence or structural similarity /// 0051209 // release of sequestered calcium ion into cytosol // inferred from sequence or structural similarity /// 0051607 // defense response to virus // inferred from sequence or structural similarity /// 0051607 // defense response to virus // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from sequence or structural similarity /// 2000473 // positive regulation of hematopoietic stem cell migration // inferred from mutant phenotype /// 2000648 // positive regulation of stem cell proliferation // inferred from mutant phenotype","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from sequence or structural similarity /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0005925 // focal adhesion // inferred from sequence or structural similarity /// 0009897 // external side of plasma membrane // inferred from direct assay /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0045121 // membrane raft // inferred from electronic annotation /// 0071944 // cell periphery // inferred from electronic annotation","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from direct assay /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005001 // transmembrane receptor protein tyrosine phosphatase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008201 // heparin binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0043395 // heparan sulfate proteoglycan binding // inferred from electronic annotation","chr1:198608224-198719756 (+) // 96.38 // q31.3"]
["11726434_at",0.0,0.09983277,-0.19124293,-0.050350428,0.0,0.14311314,0.8393232,0.5839518,-1.0434713,-0.06139097,1.0434713,"down","CHL1",10752.0,"0001764 // neuron migration // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007411 // axon guidance // inferred from electronic annotation /// 0007610 // behavior // inferred from electronic annotation /// 0008344 // adult locomotory behavior // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from electronic annotation /// 0050890 // cognition // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0030425 // dendrite // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from electronic annotation","","chr3:238649-451095 (+) // 95.63 // p26.3"]
["11756589_x_at",-0.012371063,-0.046269417,0.046723366,0.064661026,-0.071520805,0.012371063,0.97156763,0.90964854,-1.0040349,-0.0058093844,1.0040349,"down","NSUN5P1",155400.0,"","","","chr7:72418837-72425262 (-) // 88.32 // q11.23"]
["11742911_at",-8.6402893E-4,-0.024070501,8.6402893E-4,-0.026099443,0.1621511,0.024620295,0.69951534,0.3393276,-1.0436087,-0.06158083,1.0436087,"down","IGSF6",10261.0,"0006955 // immune response // traceable author statement /// 0007166 // cell surface receptor signaling pathway // traceable author statement","0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004888 // transmembrane signaling receptor activity // traceable author statement","chr16:21651924-21663981 (-) // 88.71 // p12.2"]
["11762098_at",0.063320875,0.14495897,-0.14816761,-0.11331701,0.023047209,-0.02304697,0.83731365,0.5798454,1.0408843,0.057809655,1.0408843,"up","SOBP",55084.0,"0007605 // sensory perception of sound // inferred from electronic annotation /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0042472 // inner ear morphogenesis // inferred from electronic annotation","","0046872 // metal ion binding // inferred from electronic annotation","chr6:107811807-107836277 (+) // 78.89 // q21"]
["11762703_a_at",-0.08441949,-0.05867648,0.25326443,-0.035784483,0.30771017,0.035784483,0.8856564,0.68480086,-1.0466994,-0.06584718,1.0466994,"down","LOC100131726",1.00131726E8,"","","","chr8:124213411-124214983 (-) // 48.4 // q24.13"]
["11742988_s_at",0.10409737,0.05172634,0.13569641,-0.05172634,-0.13037872,-0.09318733,0.15239748,0.004813039,1.1399239,0.18893754,1.1399239,"up","EZR",7430.0,"0007016 // cytoskeletal anchoring at plasma membrane // non-traceable author statement /// 0007159 // leukocyte cell-cell adhesion // inferred from expression pattern /// 0007411 // axon guidance // traceable author statement /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0022614 // membrane to membrane docking // inferred from expression pattern /// 0030855 // epithelial cell differentiation // inferred from electronic annotation /// 0035088 // establishment or maintenance of apical/basal cell polarity // inferred from electronic annotation /// 0051017 // actin filament bundle assembly // inferred from direct assay","0001726 // ruffle // inferred from direct assay /// 0001931 // uropod // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005884 // actin filament // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005902 // microvillus // inferred from direct assay /// 0005902 // microvillus // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0005932 // microtubule basal body // inferred from electronic annotation /// 0005938 // cell cortex // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from sequence or structural similarity /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0019898 // extrinsic to membrane // inferred from direct assay /// 0019898 // extrinsic to membrane // inferred from electronic annotation /// 0030175 // filopodium // inferred from direct assay /// 0030863 // cortical cytoskeleton // traceable author statement /// 0031528 // microvillus membrane // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from direct assay /// 0045177 // apical part of cell // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008092 // cytoskeletal protein binding // inferred from electronic annotation /// 0050839 // cell adhesion molecule binding // inferred from physical interaction /// 0051015 // actin filament binding // inferred from direct assay","chr6:159186779-159239340 (-) // 85.67 // q25.3"]
["11732170_a_at",0.029492378,-0.036815643,-0.010985374,-0.033691406,0.018404007,0.010985374,0.9548208,0.86224794,-1.0032414,-0.0046688174,1.0032414,"down","GRSF1",2926.0,"0006378 // mRNA polyadenylation // traceable author statement /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0016331 // morphogenesis of embryonic epithelium // inferred from electronic annotation","0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0003729 // mRNA binding // traceable author statement","chr4:71682122-71705607 (-) // 69.33 // q13.3"]
["11743831_s_at",-0.0016264915,0.0016264915,-0.28295898,-0.01560545,0.0910511,0.06187439,0.6168035,0.23209248,-1.1019762,-0.14009301,1.1019762,"down","RPS6KA2",6196.0,"0000089 // mitotic metaphase // inferred from electronic annotation /// 0001556 // oocyte maturation // inferred from electronic annotation /// 0002035 // brain renin-angiotensin system // inferred from electronic annotation /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0007243 // intracellular protein kinase cascade // traceable author statement /// 0007243 // intracellular protein kinase cascade // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007507 // heart development // inferred from electronic annotation /// 0008063 // Toll signaling pathway // traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0010659 // cardiac muscle cell apoptotic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from electronic annotation /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035556 // intracellular signal transduction // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0045087 // innate immune response // traceable author statement /// 0045786 // negative regulation of cell cycle // inferred from direct assay /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0060047 // heart contraction // inferred from electronic annotation /// 0070613 // regulation of protein processing // inferred from electronic annotation /// 0071322 // cellular response to carbohydrate stimulus // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004711 // ribosomal protein S6 kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:166822873-167276039 (-) // 98.19 // q27"]
["11751522_x_at",0.05117941,-0.05117941,0.19926214,-0.22127962,0.12842035,-0.17516708,0.6726381,0.30208555,1.1140105,0.15576276,1.1140105,"up","SHF",90525.0,"0006915 // apoptotic process // inferred from electronic annotation","","","chr15:45459910-45473405 (-) // 99.66 // q21.1"]
["11735114_at",-0.06879187,-0.03145051,0.109624624,0.06879234,0.03145075,-0.15733051,0.93834245,0.81484485,1.0154763,0.022156633,1.0154763,"up","CNOT4",4850.0,"0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0000289 // nuclear-transcribed mRNA poly(A) tail shortening // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0051865 // protein autoubiquitination // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:135069765-135194851 (-) // 93.7 // q33"]
["11743250_a_at",-0.04299259,-0.008170128,0.074478626,0.017167568,0.008170128,-0.05279684,0.8926234,0.70218986,1.0118006,0.016925067,1.0118006,"up","MMP2",4313.0,"0001525 // angiogenesis // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001955 // blood vessel maturation // inferred from electronic annotation /// 0001957 // intramembranous ossification // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0006508 // proteolysis // traceable author statement /// 0007566 // embryo implantation // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0030574 // collagen catabolic process // inferred from electronic annotation /// 0048705 // skeletal system morphogenesis // inferred from electronic annotation /// 0060325 // face morphogenesis // inferred from electronic annotation /// 0060346 // bone trabecula formation // inferred from electronic annotation /// 0071230 // cellular response to amino acid stimulus // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005581 // collagen // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030017 // sarcomere // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from electronic annotation","0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0004222 // metalloendopeptidase activity // traceable author statement /// 0004252 // serine-type endopeptidase activity // traceable author statement /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008270 // zinc ion binding // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:55512882-55540603 (+) // 90.65 // q12.2"]
["11739829_x_at",0.059930563,0.17655683,-0.09919548,-0.12639546,0.017241001,-0.017241001,0.7316026,0.3882774,1.0628189,0.087895766,1.0628189,"up","CYS1",192668.0,"","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0005932 // microtubule basal body // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0035085 // cilium axoneme // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0060170 // cilium membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr2:10196919-10220538 (-) // 78.0 // p25.1"]
["11751601_x_at",-0.039892197,-0.03960228,-0.0031490326,0.02491951,0.024821281,0.0031490326,0.31136692,0.033389416,-1.0318103,-0.04517773,1.0318103,"down","DPP7",29952.0,"0006508 // proteolysis // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0004177 // aminopeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // traceable author statement /// 0008239 // dipeptidyl-peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr9:140006562-140009168 (-) // 99.33 // q34.3"]
["11751287_a_at",-0.035526276,-0.07792997,-0.25058556,0.34387684,0.035526276,0.29410648,0.33532813,0.040697373,-1.2709,-0.34585053,1.2709,"down","MMP19",4327.0,"0001525 // angiogenesis // inferred from electronic annotation /// 0001541 // ovarian follicle development // inferred from electronic annotation /// 0001542 // ovulation from ovarian follicle // inferred from electronic annotation /// 0001554 // luteolysis // inferred from electronic annotation /// 0006508 // proteolysis // non-traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009725 // response to hormone stimulus // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030574 // collagen catabolic process // inferred from electronic annotation /// 0051591 // response to cAMP // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // non-traceable author statement /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from electronic annotation","0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:56230753-56236720 (-) // 99.72 // q13.2"]
["11749442_x_at",0.015973568,-0.02284193,-0.12766075,-0.015973091,0.023554802,0.03682995,0.64080197,0.26215863,-1.0422107,-0.059646968,1.0422107,"down","PYCRL",65263.0,"0006561 // proline biosynthetic process // inferred from electronic annotation /// 0008652 // cellular amino acid biosynthetic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0055129 // L-proline biosynthetic process // inferred from electronic annotation","","0000166 // nucleotide binding // inferred from electronic annotation /// 0004735 // pyrroline-5-carboxylate reductase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from electronic annotation","chr8:144686879-144691943 (-) // 96.77 // q24.3"]
["11754889_a_at",-0.059479237,-0.09259462,0.07232952,0.056320667,-0.018186092,0.018186092,0.77251714,0.45417345,-1.0319371,-0.045355067,1.0319371,"down","CCDC111",201973.0,"0006260 // DNA replication // inferred from electronic annotation /// 0006269 // DNA replication, synthesis of RNA primer // inferred from electronic annotation","","0003896 // DNA primase activity // inferred from electronic annotation","chr4:185570824-185616112 (+) // 95.36 // q35.1"]
["11736471_at",0.029103994,-0.029103756,0.16005635,-0.030270576,-0.047907352,0.09641385,0.82315224,0.547704,1.0333103,0.047273546,1.0333103,"up","RAB9B",51209.0,"0006810 // transport // inferred from electronic annotation /// 0006895 // Golgi to endosome transport // non-traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // non-traceable author statement /// 0005525 // GTP binding // inferred from electronic annotation","chrX:103077254-103087212 (-) // 89.7 // q22.2"]
["11757687_x_at",-0.013126373,-0.049881935,-0.072649,0.035224915,0.013126373,0.03510475,0.24796441,0.01786603,-1.0519294,-0.07303782,1.0519294,"down","DAD1",1603.0,"0001824 // blastocyst development // inferred from electronic annotation /// 0006486 // protein glycosylation // inferred from sequence or structural similarity /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from electronic annotation /// 0006916 // anti-apoptosis // traceable author statement /// 0007584 // response to nutrient // inferred from electronic annotation /// 0018279 // protein N-linked glycosylation via asparagine // inferred by curator /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0042493 // response to drug // inferred from electronic annotation /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005789 // endoplasmic reticulum membrane // traceable author statement /// 0008250 // oligosaccharyltransferase complex // inferred from sequence or structural similarity /// 0008250 // oligosaccharyltransferase complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004576 // oligosaccharyl transferase activity // inferred from sequence or structural similarity /// 0004579 // dolichyl-diphosphooligosaccharide-protein glycotransferase activity // inferred by curator /// 0004579 // dolichyl-diphosphooligosaccharide-protein glycotransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr14:23033804-23044128 (-) // 89.11 // q11.2"]
["11725666_at",-0.026833534,-0.0106778145,0.04314375,0.010678291,0.020152092,-0.14086485,0.81434226,0.5310139,1.0270851,0.038555674,1.0270851,"up","HS2ST1 /// LOC339524","339524 /// 9653","0015014 // heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process // inferred from electronic annotation /// 0030202 // heparin metabolic process // inferred from electronic annotation /// 0060676 // ureteric bud formation // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004394 // heparan sulfate 2-O-sulfotransferase activity // inferred from electronic annotation /// 0008146 // sulfotransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr1:87380334-87575658 (+) // 90.34 // p22.3"]
["11725045_a_at",-0.0093250275,-0.022979736,0.0093250275,0.049427032,-0.039411545,0.035001755,0.7877809,0.4791881,-1.0158347,-0.022665646,1.0158347,"down","UAP1",6675.0,"0006048 // UDP-N-acetylglucosamine biosynthetic process // inferred from electronic annotation /// 0006048 // UDP-N-acetylglucosamine biosynthetic process // traceable author statement /// 0006488 // dolichol-linked oligosaccharide biosynthetic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay","0003977 // UDP-N-acetylglucosamine diphosphorylase activity // traceable author statement /// 0003977 // UDP-N-acetylglucosamine diphosphorylase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016779 // nucleotidyltransferase activity // inferred from electronic annotation","chr1:162531268-162569627 (+) // 94.36 // q23.3"]
["11745051_a_at",-0.14633346,0.04020667,0.13813543,0.032317877,-0.032317877,-0.23787308,0.79022217,0.48346016,1.0643411,0.08996054,1.0643411,"up","GRIA3",2892.0,"0001919 // regulation of receptor recycling // inferred from electronic annotation /// 0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0007215 // glutamate receptor signaling pathway // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0010226 // response to lithium ion // inferred from electronic annotation /// 0035235 // ionotropic glutamate receptor signaling pathway // inferred from electronic annotation /// 0060992 // response to fungicide // inferred from electronic annotation","0005624 // membrane fraction // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0030666 // endocytic vesicle membrane // traceable author statement /// 0032279 // asymmetric synapse // inferred from electronic annotation /// 0032281 // alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective glutamate receptor complex // inferred from sequence or structural similarity /// 0032281 // alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective glutamate receptor complex // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043083 // synaptic cleft // inferred from electronic annotation /// 0043195 // terminal button // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from electronic annotation /// 0043198 // dendritic shaft // inferred from electronic annotation /// 0043204 // perikaryon // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004970 // ionotropic glutamate receptor activity // inferred from electronic annotation /// 0004971 // alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor activity // inferred from direct assay /// 0004971 // alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor activity // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005234 // extracellular-glutamate-gated ion channel activity // inferred from electronic annotation /// 0030165 // PDZ domain binding // inferred from electronic annotation","chrX:122318151-122338534 (+) // 78.64 // q25"]
["11728883_a_at",-0.0063056946,-0.067801,-0.047562122,0.023110151,0.13035274,0.0063056946,0.4476486,0.09381223,-1.0671866,-0.09381245,1.0671866,"down","PRSS35",167681.0,"0008152 // metabolic process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation","chr6:84222054-84235423 (+) // 94.56 // q14.2"]
["11745786_a_at",-0.013056755,-0.05955696,0.05736065,0.013056755,-0.04045677,0.03004837,0.96371895,0.88884956,-1.0041447,-0.0059671355,1.0041447,"down","CSNK2B",1460.0,"0007165 // signal transduction // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0010862 // positive regulation of pathway-restricted SMAD protein phosphorylation // inferred from direct assay /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0032927 // positive regulation of activin receptor signaling pathway // inferred from mutant phenotype /// 0033211 // adiponectin-mediated signaling pathway // inferred from direct assay /// 0043537 // negative regulation of blood vessel endothelial cell migration // inferred from direct assay /// 0043623 // cellular protein complex assembly // non-traceable author statement /// 0045859 // regulation of protein kinase activity // non-traceable author statement /// 0045859 // regulation of protein kinase activity // inferred from electronic annotation /// 0051101 // regulation of DNA binding // non-traceable author statement /// 0061154 // endothelial tube morphogenesis // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005956 // protein kinase CK2 complex // inferred from electronic annotation /// 0005956 // protein kinase CK2 complex // non-traceable author statement /// 0031519 // PcG protein complex // inferred from direct assay","0004674 // protein serine/threonine kinase activity // traceable author statement /// 0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0016301 // kinase activity // inferred from electronic annotation /// 0019887 // protein kinase regulator activity // inferred from electronic annotation /// 0019887 // protein kinase regulator activity // non-traceable author statement /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:31633853-31641285 (+) // 91.34 // p21.33"]
["11734090_s_at",-0.12965393,-0.19961262,0.005180359,0.03966427,0.056723595,-0.005179882,0.44559166,0.09246205,-1.1007077,-0.13843134,1.1007077,"down","C5orf42",65250.0,"","0016021 // integral to membrane // inferred from electronic annotation","","chr5:37106089-37214230 (-) // 86.97 // p13.2"]
["11736182_x_at",-0.03001833,0.010042667,-0.28264236,0.083518505,4.3725967E-4,-4.3725967E-4,0.6312071,0.25006092,-1.0933173,-0.12871212,1.0933173,"down","ZNF747",65988.0,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:30542431-30546325 (-) // 64.2 // p11.2"]
["11736238_a_at",-0.027998447,-0.07917452,0.01878357,-0.01878357,0.057137012,0.062265396,0.5624708,0.17761284,-1.0446378,-0.06300281,1.0446378,"down","ABCA5",23461.0,"0006200 // ATP catabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0010745 // negative regulation of macrophage derived foam cell differentiation // inferred from sequence or structural similarity /// 0010745 // negative regulation of macrophage derived foam cell differentiation // inferred from electronic annotation /// 0033344 // cholesterol efflux // inferred from sequence or structural similarity /// 0033344 // cholesterol efflux // inferred from electronic annotation /// 0034375 // high-density lipoprotein particle remodeling // inferred from sequence or structural similarity /// 0034375 // high-density lipoprotein particle remodeling // inferred from electronic annotation /// 0043691 // reverse cholesterol transport // inferred by curator","0000139 // Golgi membrane // inferred from electronic annotation /// 0005764 // lysosome // inferred from sequence or structural similarity /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from sequence or structural similarity /// 0005770 // late endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031902 // late endosome membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation","chr17:67239944-67323252 (-) // 72.88 // q24.3"]
["11741911_a_at",-0.11542511,-0.1382122,0.008528233,0.13819504,-0.008528233,0.044024944,0.44100115,0.08966443,-1.1015998,-0.13960022,1.1015998,"down","GBP3",2635.0,"0006184 // GTP catabolic process // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation","chr1:89472359-89488549 (-) // 99.57 // p22.2"]
["11754294_s_at",0.03286791,0.005036354,0.12967396,-0.005035877,-0.09809065,-0.04378748,0.43653503,0.08685262,1.0753682,0.10483067,1.0753682,"up","STK40",83931.0,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr1:36805228-36811194 (-) // 90.61 // p34.3"]
["11762285_x_at",-0.09041548,-0.023642063,0.27488708,-0.07968497,0.023642063,0.076936245,0.90055394,0.7202558,1.0328605,0.046645436,1.0328605,"up","SSX8",280659.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation","chrX:52651984-52659458 (+) // 99.9 // p11.22"]
["11756978_a_at",-0.002805233,-0.16717005,0.19122696,0.055942774,0.002805233,-0.04419756,0.99516153,0.98442316,1.0015495,0.0022337004,1.0015495,"up","KCNN2",3781.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006813 // potassium ion transport // non-traceable author statement /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement","0005216 // ion channel activity // inferred from electronic annotation /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0015269 // calcium-activated potassium channel activity // inferred from electronic annotation /// 0016286 // small conductance calcium-activated potassium channel activity // inferred from electronic annotation /// 0016286 // small conductance calcium-activated potassium channel activity // traceable author statement","chr5:113798745-113832192 (+) // 75.62 // q22.3"]
["11743004_x_at",-0.040439606,-0.02792263,0.033031464,0.004887581,0.03574276,-0.004887581,0.7458964,0.41020903,-1.0165571,-0.02369125,1.0165571,"down","EXOSC9",5393.0,"0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0000956 // nuclear-transcribed mRNA catabolic process // inferred from mutant phenotype /// 0006364 // rRNA processing // non-traceable author statement /// 0006364 // rRNA processing // inferred from electronic annotation /// 0006955 // immune response // non-traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0030307 // positive regulation of cell growth // inferred from mutant phenotype /// 0043928 // exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay // inferred from mutant phenotype /// 0043928 // exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay // traceable author statement /// 0071028 // nuclear mRNA surveillance // inferred from mutant phenotype /// 0071035 // nuclear polyadenylation-dependent rRNA catabolic process // inferred from mutant phenotype","0000176 // nuclear exosome (RNase complex) // inferred from direct assay /// 0000176 // nuclear exosome (RNase complex) // non-traceable author statement /// 0000178 // exosome (RNase complex) // inferred from direct assay /// 0000178 // exosome (RNase complex) // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005730 // nucleolus // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000175 // 3'-5'-exoribonuclease activity // non-traceable author statement /// 0003723 // RNA binding // non-traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0004527 // exonuclease activity // inferred from electronic annotation /// 0004532 // exoribonuclease activity // inferred from direct assay /// 0017091 // AU-rich element binding // inferred from direct assay","chr4:122722471-122738176 (+) // 96.72 // q27"]
["11737224_at",-0.12690997,-0.0026359558,0.103414536,0.27375007,-0.107224464,0.0026359558,0.8686345,0.6461166,-1.0461557,-0.06509757,1.0461557,"down","MAS1",4142.0,"0001933 // negative regulation of protein phosphorylation // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from direct assay /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007250 // activation of NF-kappaB-inducing kinase activity // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008584 // male gonad development // inferred from electronic annotation /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0014823 // response to activity // inferred from electronic annotation /// 0021766 // hippocampus development // inferred from electronic annotation /// 0034698 // response to gonadotropin stimulus // inferred from electronic annotation /// 0038166 // angiotensin-mediated signaling pathway // inferred from sequence or structural similarity /// 0038166 // angiotensin-mediated signaling pathway // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0043434 // response to peptide hormone stimulus // inferred from electronic annotation /// 0045740 // positive regulation of DNA replication // inferred from electronic annotation /// 0050727 // regulation of inflammatory response // inferred from electronic annotation /// 0060732 // positive regulation of inositol phosphate biosynthetic process // inferred from electronic annotation /// 0070528 // protein kinase C signaling cascade // inferred from mutant phenotype /// 0071375 // cellular response to peptide hormone stimulus // inferred from electronic annotation","0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0001595 // angiotensin receptor activity // inferred from sequence or structural similarity /// 0001595 // angiotensin receptor activity // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from direct assay /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement /// 0004945 // angiotensin type II receptor activity // traceable author statement /// 0017046 // peptide hormone binding // inferred from electronic annotation /// 0042277 // peptide binding // inferred from sequence or structural similarity /// 0042277 // peptide binding // inferred from electronic annotation","chr6:160327721-160329108 (+) // 99.93 // q25.3"]
["11738608_a_at",0.15892649,0.0,0.0,0.10119057,-0.18596506,-0.21778488,0.6312071,0.25005767,1.112518,0.15382862,1.112518,"up","SYT10",341359.0,"0006810 // transport // inferred from electronic annotation","0008021 // synaptic vesicle // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030672 // synaptic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr12:33528005-33592754 (-) // 99.81 // p11.1"]
["11747199_a_at",0.1464405,0.009662151,-0.035933018,-0.009350777,-0.071084976,0.0093503,0.70593077,0.3474846,1.0451802,0.0637517,1.0451802,"up","CHERP",10523.0,"0006396 // RNA processing // inferred from electronic annotation /// 0006874 // cellular calcium ion homeostasis // inferred from direct assay /// 0007399 // nervous system development // traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0051209 // release of sequestered calcium ion into cytosol // inferred from mutant phenotype /// 0051533 // positive regulation of NFAT protein import into nucleus // inferred from mutant phenotype","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0033017 // sarcoplasmic reticulum membrane // inferred from sequence or structural similarity /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0044325 // ion channel binding // inferred from physical interaction","chr19:16629767-16637085 (-) // 97.21 // p13.11"]
["11730505_a_at",0.04860878,-0.0653286,0.07403183,-0.04860878,-0.11929035,0.09076595,0.8387683,0.58294725,1.0315509,0.04481499,1.0315509,"up","RD3",343035.0,"0007601 // visual perception // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0060041 // retina development in camera-type eye // inferred from electronic annotation","","","chr1:211649863-211666259 (-) // 74.61 // q32.3"]
["11757667_x_at",0.0434072,0.07556653,0.0,-0.014609098,0.0,-0.06680274,0.43948656,0.08878358,1.0473875,0.06679527,1.0473875,"up","APOA2",336.0,"0002526 // acute inflammatory response // inferred from electronic annotation /// 0002740 // negative regulation of cytokine secretion involved in immune response // inferred from direct assay /// 0006457 // protein folding // inferred from direct assay /// 0006629 // lipid metabolic process // traceable author statement /// 0006641 // triglyceride metabolic process // traceable author statement /// 0006656 // phosphatidylcholine biosynthetic process // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // inferred from electronic annotation /// 0009395 // phospholipid catabolic process // inferred from direct assay /// 0009749 // response to glucose stimulus // inferred from direct assay /// 0010873 // positive regulation of cholesterol esterification // inferred from direct assay /// 0010903 // negative regulation of very-low-density lipoprotein particle remodeling // inferred from direct assay /// 0018158 // protein oxidation // inferred from direct assay /// 0018206 // peptidyl-methionine modification // inferred from direct assay /// 0030300 // regulation of intestinal cholesterol absorption // inferred from electronic annotation /// 0030301 // cholesterol transport // inferred from electronic annotation /// 0031100 // organ regeneration // inferred from electronic annotation /// 0031647 // regulation of protein stability // inferred from direct assay /// 0032375 // negative regulation of cholesterol transport // inferred from mutant phenotype /// 0033344 // cholesterol efflux // inferred from direct assay /// 0033700 // phospholipid efflux // inferred from direct assay /// 0034370 // triglyceride-rich lipoprotein particle remodeling // inferred from direct assay /// 0034374 // low-density lipoprotein particle remodeling // inferred from direct assay /// 0034375 // high-density lipoprotein particle remodeling // inferred from direct assay /// 0034380 // high-density lipoprotein particle assembly // inferred from direct assay /// 0034384 // high-density lipoprotein particle clearance // inferred from direct assay /// 0042157 // lipoprotein metabolic process // traceable author statement /// 0042157 // lipoprotein metabolic process // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042632 // cholesterol homeostasis // inferred from direct assay /// 0042632 // cholesterol homeostasis // inferred from electronic annotation /// 0043627 // response to estrogen stimulus // inferred from electronic annotation /// 0043691 // reverse cholesterol transport // inferred from direct assay /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045416 // positive regulation of interleukin-8 biosynthetic process // inferred from direct assay /// 0046340 // diacylglycerol catabolic process // inferred from direct assay /// 0050995 // negative regulation of lipid catabolic process // inferred from direct assay /// 0050996 // positive regulation of lipid catabolic process // inferred from direct assay /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation /// 0060192 // negative regulation of lipase activity // inferred from direct assay /// 0060192 // negative regulation of lipase activity // inferred from electronic annotation /// 0060621 // negative regulation of cholesterol import // inferred from direct assay /// 0060695 // negative regulation of cholesterol transporter activity // inferred from direct assay","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0034361 // very-low-density lipoprotein particle // inferred from direct assay /// 0034364 // high-density lipoprotein particle // inferred from direct assay /// 0034364 // high-density lipoprotein particle // inferred from electronic annotation /// 0034366 // spherical high-density lipoprotein particle // inferred from direct assay /// 0042627 // chylomicron // inferred from direct assay","0005319 // lipid transporter activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from direct assay /// 0008035 // high-density lipoprotein particle binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from direct assay /// 0008289 // lipid binding // inferred from electronic annotation /// 0015485 // cholesterol binding // inferred from direct assay /// 0017127 // cholesterol transporter activity // inferred from direct assay /// 0017127 // cholesterol transporter activity // inferred from electronic annotation /// 0031210 // phosphatidylcholine binding // inferred from direct assay /// 0034190 // apolipoprotein receptor binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from physical interaction /// 0055102 // lipase inhibitor activity // inferred from direct assay /// 0060228 // phosphatidylcholine-sterol O-acyltransferase activator activity // inferred from direct assay /// 0070653 // high-density lipoprotein particle receptor binding // inferred from physical interaction","chr1:161192081-161193418 (-) // 94.17 // q23.3"]
["11763053_a_at",0.06422615,0.01266098,0.01629877,-0.01266098,-0.16572285,-0.12733555,0.3684316,0.05299524,1.0965476,0.13296844,1.0965476,"up","KIF25-AS1",1.00505879E8,"","","","chr6:168396470-168397188 (-) // 74.83 // q27"]
["11730504_at",-0.02814579,-0.11774206,0.035063267,-0.07003546,0.02814579,0.053439617,0.80962247,0.5217688,-1.028678,-0.040791538,1.028678,"down","ADAMTS2",9509.0,"0006508 // proteolysis // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0016485 // protein processing // inferred from electronic annotation /// 0030199 // collagen fibril organization // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0030574 // collagen catabolic process // inferred from electronic annotation /// 0043588 // skin development // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from electronic annotation","0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0004222 // metalloendopeptidase activity // traceable author statement /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // traceable author statement /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr5:178540737-178772329 (-) // 98.2 // q35.3"]
["11758578_s_at",0.074272156,-0.086191654,0.008079529,0.06382084,-0.008080006,-0.23088741,0.8471217,0.59920204,1.0403739,0.05710214,1.0403739,"up","AEBP2",121536.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0035098 // ESC/E(Z) complex // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003714 // transcription corepressor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:19673487-19673894 (+) // 30.22 // p12.3"]
["11764085_at",0.08920097,0.025538921,-0.20865107,-0.1989975,0.034907818,-0.025538921,0.93109596,0.794358,1.0223618,0.031905774,1.0223618,"up","","","","","","chr17:17402076-17402529 (+) // 96.79 // p11.2"]
["11761989_at",-0.05055523,0.2898841,0.18835115,-0.03228283,0.03228283,-0.16307044,0.5485808,0.16517307,1.1462461,0.19691679,1.1462461,"up","GPR116",221395.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007218 // neuropeptide signaling pathway // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement","chr6:46821310-46836830 (-) // 98.22 // p12.3"]
["11739194_s_at",-0.048853874,-0.060500145,0.019787788,-0.019787788,0.02575779,0.024590492,0.62502545,0.24206248,-1.0281439,-0.040042173,1.0281439,"down","LOC100287789 /// SLMAP","100287789 /// 7871","0006457 // protein folding // inferred from electronic annotation /// 0006936 // muscle contraction // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005790 // smooth endoplasmic reticulum // traceable author statement /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016272 // prefoldin complex // inferred from electronic annotation /// 0042383 // sarcolemma // inferred from electronic annotation","0051082 // unfolded protein binding // inferred from electronic annotation","chr3:57743173-57915283 (+) // 98.48 // p14.3"]
["AFFX-ThrX-3_at",-0.0774622,-0.017186165,0.020935059,0.017186642,-0.120792866,0.017419338,0.9827833,0.94255275,1.0028862,0.0041578747,1.0028862,"up",0.020935059,"","","0006508 // proteolysis // inferred from electronic annotation /// 0006520 // cellular amino acid metabolic process // inferred from electronic annotation /// 0006566 // threonine metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008652 // cellular amino acid biosynthetic process // inferred from electronic annotation /// 0009082 // branched chain family amino acid biosynthetic process // inferred from electronic annotation /// 0009086 // methionine biosynthetic process // inferred from electronic annotation /// 0009088 // threonine biosynthetic process // inferred from electronic annotation /// 0009097 // isoleucine biosynthetic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004412 // homoserine dehydrogenase activity // inferred from electronic annotation /// 0004413 // homoserine kinase activity // inferred from electronic annotation /// 0004795 // threonine synthase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016597 // amino acid binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation /// 0050661 // NADP binding // inferred from electronic annotation"]
["11758614_s_at",-0.08797479,0.029291153,-0.026028633,0.13385987,-0.12100196,0.026028633,0.8646121,0.63881,-1.028969,-0.041199587,1.028969,"down","FAM19A5",25817.0,"","0005576 // extracellular region // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr22:49147376-49147743 (+) // 99.73 // q13.32"]
["11760599_at",0.004858494,-0.02867508,0.22191572,-0.004858494,0.106379986,-0.030651093,0.874359,0.65886956,1.0298324,0.042409513,1.0298324,"up","HIP1",3092.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006897 // endocytosis // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from direct assay /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from direct assay /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0008219 // cell death // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from direct assay /// 0048260 // positive regulation of receptor-mediated endocytosis // inferred from mutant phenotype /// 0048260 // positive regulation of receptor-mediated endocytosis // inferred from electronic annotation /// 0048268 // clathrin coat assembly // inferred from direct assay","0005624 // membrane fraction // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005856 // cytoskeleton // traceable author statement /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030136 // clathrin-coated vesicle // inferred from direct assay /// 0030665 // clathrin coated vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0003779 // actin binding // inferred from electronic annotation /// 0005200 // structural constituent of cytoskeleton // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0030276 // clathrin binding // inferred from direct assay /// 0035091 // phosphatidylinositol binding // inferred from direct assay","chr7:75362737-75368280 (-) // 87.16 // q11.23"]
["11755837_a_at",-0.07006025,0.072598934,-0.054457188,0.021948814,-0.006911278,0.006911278,0.85635835,0.62039423,-1.0172135,-0.024622463,1.0172135,"down","ARHGEF5",7984.0,"0032319 // regulation of Rho GTPase activity // inferred from direct assay /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay","0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005525 // GTP binding // traceable author statement /// 0005543 // phospholipid binding // inferred from electronic annotation","chr7:144062001-144077724 (+) // 97.28 // q35"]
["11746882_x_at",0.050169468,0.009698391,-0.009698391,0.010612965,-0.010612011,-0.04712248,0.634611,0.25453,1.0227336,0.03243036,1.0227336,"up","ZNF155",7711.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:44488345-44502100 (+) // 69.13 // q13.31"]
["11734739_a_at",0.07227945,0.24395657,-0.032170057,0.032170057,-0.1474297,-0.10551548,0.5419607,0.15800898,1.1237183,0.16828036,1.1237183,"up","PHYHIPL",84457.0,"","0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation","","chr10:60936285-61009168 (+) // 88.51 // q21.1"]
["11722463_a_at",-0.17130423,0.012178421,-0.09121418,0.17098665,0.10264063,-0.012178421,0.43558517,0.08626886,-1.1255236,-0.17059626,1.1255236,"down","TNKS2",80351.0,"0000209 // protein polyubiquitination // inferred from direct assay /// 0006471 // protein ADP-ribosylation // inferred from direct assay /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0032212 // positive regulation of telomere maintenance via telomerase // inferred by curator /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0040014 // regulation of multicellular organism growth // inferred from electronic annotation /// 0070198 // protein localization to chromosome, telomeric region // inferred from mutant phenotype /// 0070213 // protein auto-ADP-ribosylation // inferred from direct assay /// 0090263 // positive regulation of canonical Wnt receptor signaling pathway // inferred from mutant phenotype","0000139 // Golgi membrane // inferred from electronic annotation /// 0000242 // pericentriolar material // inferred from direct assay /// 0000781 // chromosome, telomeric region // inferred from electronic annotation /// 0000784 // nuclear chromosome, telomeric region // inferred by curator /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from direct assay /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005792 // microsome // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0003950 // NAD+ ADP-ribosyltransferase activity // inferred from direct assay /// 0003950 // NAD+ ADP-ribosyltransferase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr10:93558068-93625506 (+) // 99.95 // q23.32"]
["11742816_a_at",0.13757515,0.06499863,-0.0016021729,-0.1028862,0.0016021729,-0.026943207,0.45372576,0.097185954,1.0790285,0.109732956,1.0790285,"up","FAM13A",10144.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0005096 // GTPase activator activity // inferred from electronic annotation","chr4:89647110-89978311 (-) // 98.33 // q22.1"]
["11734919_s_at",0.01966858,0.047964096,0.014665604,-0.014665604,-0.0696888,-0.041873932,0.26528436,0.021493431,1.0493594,0.06950893,1.0493594,"up","TCEA1",6917.0,"0006281 // DNA repair // traceable author statement /// 0006283 // transcription-coupled nucleotide-excision repair // traceable author statement /// 0006289 // nucleotide-excision repair // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006368 // transcription elongation from RNA polymerase II promoter // traceable author statement /// 0006414 // translational elongation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0030218 // erythrocyte differentiation // inferred from electronic annotation /// 0032784 // regulation of transcription elongation, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0050434 // positive regulation of viral transcription // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003746 // translation elongation factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:37317046-37319642 (+) // 92.43 // p22.2 /// chr8:54879116-54935008 (-) // 99.14 // q11.23"]
["11718013_at",0.10059452,0.120705605,0.117284775,-0.1507349,-0.10059452,-0.114414215,0.05333698,1.3153318E-4,1.1767242,0.23477621,1.1767242,"up","IRS2",8660.0,"0002053 // positive regulation of mesenchymal cell proliferation // inferred from electronic annotation /// 0002903 // negative regulation of B cell apoptotic process // inferred from sequence or structural similarity /// 0002903 // negative regulation of B cell apoptotic process // inferred from electronic annotation /// 0006006 // glucose metabolic process // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // non-traceable author statement /// 0008286 // insulin receptor signaling pathway // inferred from sequence or structural similarity /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008286 // insulin receptor signaling pathway // inferred from electronic annotation /// 0009749 // response to glucose stimulus // inferred from sequence or structural similarity /// 0009749 // response to glucose stimulus // inferred from electronic annotation /// 0010748 // negative regulation of plasma membrane long-chain fatty acid transport // inferred from mutant phenotype /// 0010907 // positive regulation of glucose metabolic process // inferred from mutant phenotype /// 0019216 // regulation of lipid metabolic process // traceable author statement /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0030879 // mammary gland development // inferred from electronic annotation /// 0030890 // positive regulation of B cell proliferation // inferred from sequence or structural similarity /// 0030890 // positive regulation of B cell proliferation // inferred from electronic annotation /// 0032000 // positive regulation of fatty acid beta-oxidation // inferred from mutant phenotype /// 0032024 // positive regulation of insulin secretion // inferred from sequence or structural similarity /// 0032024 // positive regulation of insulin secretion // inferred from electronic annotation /// 0032869 // cellular response to insulin stimulus // inferred from mutant phenotype /// 0032869 // cellular response to insulin stimulus // inferred from electronic annotation /// 0033673 // negative regulation of kinase activity // inferred from sequence or structural similarity /// 0033673 // negative regulation of kinase activity // inferred from electronic annotation /// 0045725 // positive regulation of glycogen biosynthetic process // inferred from mutant phenotype /// 0045725 // positive regulation of glycogen biosynthetic process // non-traceable author statement /// 0046326 // positive regulation of glucose import // inferred from mutant phenotype /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0055088 // lipid homeostasis // traceable author statement /// 0060397 // JAK-STAT cascade involved in growth hormone signaling pathway // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004871 // signal transducer activity // traceable author statement /// 0005158 // insulin receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0043548 // phosphatidylinositol 3-kinase binding // inferred from electronic annotation","chr13:110406183-110438915 (-) // 86.22 // q34"]
["11747756_x_at",0.051740646,-0.11056304,0.16620922,-0.051740646,0.16066146,-0.121564865,0.91316503,0.7492409,1.0281211,0.040010225,1.0281211,"up","KRT13",3860.0,"0008544 // epidermis development // traceable author statement /// 0009314 // response to radiation // inferred from electronic annotation /// 0043587 // tongue morphogenesis // inferred from electronic annotation /// 0071300 // cellular response to retinoic acid // inferred from electronic annotation","0005882 // intermediate filament // inferred from electronic annotation /// 0045095 // keratin filament // inferred from direct assay","0005198 // structural molecule activity // inferred from electronic annotation","chr17:39658501-39661864 (-) // 95.42 // q21.2"]
["11758668_s_at",-0.0703454,-0.09827185,-0.06815195,0.10941458,0.06815195,0.23151779,0.21666434,0.012585082,-1.1609328,-0.21528444,1.1609328,"down","ARL17A /// ARL17B /// LOC100294341","100294341 /// 100506084 /// 51326","0006810 // transport // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation","chr17:43623420-43623706 (+) // 96.15 // q21.31 /// chr17:62889096-62889382 (+) // 95.8 // q24.1 /// chr17:44376495-44376781 (-) // 96.15 // q21.31 /// chr17:45098551-45098837 (-) // 96.15 // q21.32 /// chr17:44594063-44594349 (-) // 95.8 // q21.31"]
["11742818_a_at",-0.02882862,-0.009496689,-0.02553749,0.07288265,0.050243378,0.009496689,0.29275417,0.028260725,-1.046444,-0.065495186,1.046444,"down","PLAUR",5329.0,"0006501 // C-terminal protein lipidation // traceable author statement /// 0006928 // cellular component movement // non-traceable author statement /// 0006935 // chemotaxis // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007596 // blood coagulation // non-traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0010629 // negative regulation of gene expression // inferred from electronic annotation /// 0016255 // attachment of GPI anchor to protein // traceable author statement /// 0030162 // regulation of proteolysis // non-traceable author statement /// 0042730 // fibrinolysis // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043403 // skeletal muscle tissue regeneration // inferred from electronic annotation /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0048762 // mesenchymal cell differentiation // inferred from electronic annotation /// 0060742 // epithelial cell differentiation involved in prostate gland development // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0019898 // extrinsic to membrane // traceable author statement /// 0031225 // anchored to membrane // inferred from electronic annotation","0004872 // receptor activity // non-traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0004872 // receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0030377 // U-plasminogen activator receptor activity // non-traceable author statement /// 0030377 // U-plasminogen activator receptor activity // inferred from electronic annotation","chr19:44152730-44174502 (-) // 45.24 // q13.31"]
["11716671_x_at",-0.09178352,-0.1009388,-0.04118061,0.055236816,0.04118061,0.06354618,0.122316234,0.0026314575,-1.0952717,-0.13128881,1.0952717,"down","PIGY",84992.0,"0006506 // GPI anchor biosynthetic process // inferred from direct assay /// 0006506 // GPI anchor biosynthetic process // inferred from electronic annotation /// 0006506 // GPI anchor biosynthetic process // inferred from mutant phenotype /// 0009893 // positive regulation of metabolic process // inferred from mutant phenotype","0000506 // glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr4:89442145-89444964 (-) // 95.26 // q22.1"]
["11736647_s_at",0.039215088,0.022474289,0.08640003,-0.046364784,-0.056729317,-0.022474289,0.22311717,0.013570626,1.0652701,0.091219224,1.0652701,"up","CRK",1398.0,"0000186 // activation of MAPKK activity // traceable author statement /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0032319 // regulation of Rho GTPase activity // inferred from direct assay /// 0032956 // regulation of actin cytoskeleton organization // inferred from direct assay /// 0035020 // regulation of Rac protein signal transduction // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048013 // ephrin receptor signaling pathway // inferred from direct assay","0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred by curator /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005070 // SH3/SH2 adaptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0030674 // protein binding, bridging // inferred from electronic annotation /// 0042169 // SH2 domain binding // inferred from physical interaction /// 0045309 // protein phosphorylated amino acid binding // inferred from electronic annotation /// 0046875 // ephrin receptor binding // inferred from physical interaction /// 0046875 // ephrin receptor binding // inferred from electronic annotation","chr17:1325475-1359544 (-) // 80.25 // p13.3"]
["11745719_a_at",0.13735485,0.15133953,-0.2959957,0.07085037,-0.07085037,-0.14475965,0.92889667,0.7886642,1.0322694,0.045819473,1.0322694,"up","HMG20A",10363.0,"0006325 // chromatin organization // non-traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr15:77712734-77777945 (+) // 95.38 // q24.3"]
["11759558_at",-2.6273727E-4,2.632141E-4,0.1486206,-0.0412879,0.019535542,-0.13444328,0.58942705,0.20276433,1.0729669,0.10160562,1.0729669,"up","THAP3",90326.0,"","","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:6684924-6693622 (+) // 97.43 // p36.31"]
["11757693_s_at",-0.038826942,0.0024385452,0.0,0.0,0.035765648,-0.02839899,0.82843536,0.5584119,-1.0101608,-0.014584969,1.0101608,"down","PIAS3",10401.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0009725 // response to hormone stimulus // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0016925 // protein sumoylation // inferred from electronic annotation /// 0016925 // protein sumoylation // inferred from sequence or structural similarity /// 0033235 // positive regulation of protein sumoylation // inferred from direct assay /// 0045838 // positive regulation of membrane potential // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0015459 // potassium channel regulator activity // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0019789 // SUMO ligase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from electronic annotation /// 0051059 // NF-kappaB binding // inferred from physical interaction","chr1:145585984-145586546 (+) // 93.39 // q21.1"]
["11749935_s_at",0.0028791428,-0.0028791428,0.092451096,-0.015101433,0.033932686,-0.07708645,0.68760717,0.32248816,1.0354339,0.050235443,1.0354339,"up","TPM3",7170.0,"0006928 // cellular component movement // traceable author statement /// 0006936 // muscle contraction // traceable author statement /// 0006937 // regulation of muscle contraction // non-traceable author statement /// 0030049 // muscle filament sliding // traceable author statement","0001725 // stress fiber // inferred from direct assay /// 0002102 // podosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // non-traceable author statement /// 0005856 // cytoskeleton // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005862 // muscle thin filament tropomyosin // traceable author statement /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0030426 // growth cone // inferred from electronic annotation /// 0030863 // cortical cytoskeleton // inferred from electronic annotation /// 0031941 // filamentous actin // inferred from electronic annotation /// 0032154 // cleavage furrow // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation","chr16:52689144-52690489 (+) // 92.75 // q12.2 /// chr19:42011983-42013353 (+) // 90.44 // q13.2 /// chr1:154129587-154155703 (-) // 98.17 // q21.3"]
["11743498_at",-0.00810051,-0.0054340363,0.01017189,0.0054340363,0.018938065,-0.010951042,0.85533893,0.6175641,-1.0038854,-0.005594569,1.0038854,"down","BMP2",650.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001501 // skeletal system development // traceable author statement /// 0001503 // ossification // inferred from electronic annotation /// 0001649 // osteoblast differentiation // inferred from direct assay /// 0001649 // osteoblast differentiation // inferred from electronic annotation /// 0001658 // branching involved in ureteric bud morphogenesis // inferred from sequence or structural similarity /// 0001658 // branching involved in ureteric bud morphogenesis // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from sequence or structural similarity /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from sequence or structural similarity /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001837 // epithelial to mesenchymal transition // inferred from direct assay /// 0001934 // positive regulation of protein phosphorylation // inferred from direct assay /// 0001938 // positive regulation of endothelial cell proliferation // inferred from direct assay /// 0003130 // BMP signaling pathway involved in heart induction // inferred from direct assay /// 0003181 // atrioventricular valve morphogenesis // inferred from sequence or structural similarity /// 0003181 // atrioventricular valve morphogenesis // inferred from electronic annotation /// 0003203 // endocardial cushion morphogenesis // inferred from sequence or structural similarity /// 0003203 // endocardial cushion morphogenesis // inferred from electronic annotation /// 0003308 // negative regulation of Wnt receptor signaling pathway involved in heart development // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006954 // inflammatory response // inferred from sequence or structural similarity /// 0006954 // inflammatory response // inferred from electronic annotation /// 0007219 // Notch signaling pathway // inferred from sequence or structural similarity /// 0007219 // Notch signaling pathway // inferred from electronic annotation /// 0007267 // cell-cell signaling // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007507 // heart development // inferred from sequence or structural similarity /// 0007507 // heart development // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0009790 // embryo development // inferred from sequence or structural similarity /// 0009790 // embryo development // inferred from electronic annotation /// 0009887 // organ morphogenesis // inferred from sequence or structural similarity /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from direct assay /// 0010629 // negative regulation of gene expression // inferred from electronic annotation /// 0010718 // positive regulation of epithelial to mesenchymal transition // inferred from electronic annotation /// 0010862 // positive regulation of pathway-restricted SMAD protein phosphorylation // inferred from direct assay /// 0010862 // positive regulation of pathway-restricted SMAD protein phosphorylation // inferred from mutant phenotype /// 0010894 // negative regulation of steroid biosynthetic process // inferred from direct assay /// 0010922 // positive regulation of phosphatase activity // inferred from direct assay /// 0021537 // telencephalon development // inferred from direct assay /// 0021978 // telencephalon regionalization // inferred from sequence or structural similarity /// 0021978 // telencephalon regionalization // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030177 // positive regulation of Wnt receptor signaling pathway // inferred from sequence or structural similarity /// 0030177 // positive regulation of Wnt receptor signaling pathway // inferred from electronic annotation /// 0030282 // bone mineralization // inferred from sequence or structural similarity /// 0030282 // bone mineralization // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from sequence or structural similarity /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0030501 // positive regulation of bone mineralization // inferred from direct assay /// 0030509 // BMP signaling pathway // inferred from direct assay /// 0030509 // BMP signaling pathway // inferred from mutant phenotype /// 0030509 // BMP signaling pathway // traceable author statement /// 0030509 // BMP signaling pathway // inferred from electronic annotation /// 0031648 // protein destabilization // inferred from electronic annotation /// 0032348 // negative regulation of aldosterone biosynthetic process // inferred from direct assay /// 0032526 // response to retinoic acid // inferred from electronic annotation /// 0033690 // positive regulation of osteoblast proliferation // inferred from sequence or structural similarity /// 0033690 // positive regulation of osteoblast proliferation // inferred from electronic annotation /// 0035051 // cardiac cell differentiation // inferred from direct assay /// 0035051 // cardiac cell differentiation // inferred from mutant phenotype /// 0035054 // embryonic heart tube anterior/posterior pattern specification // inferred from sequence or structural similarity /// 0035054 // embryonic heart tube anterior/posterior pattern specification // inferred from electronic annotation /// 0035630 // bone mineralization involved in bone maturation // inferred from direct assay /// 0040007 // growth // inferred from electronic annotation /// 0042475 // odontogenesis of dentin-containing tooth // inferred from sequence or structural similarity /// 0042475 // odontogenesis of dentin-containing tooth // inferred from electronic annotation /// 0042482 // positive regulation of odontogenesis // inferred from sequence or structural similarity /// 0042482 // positive regulation of odontogenesis // inferred from electronic annotation /// 0042698 // ovulation cycle // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0043569 // negative regulation of insulin-like growth factor receptor signaling pathway // inferred from direct assay /// 0045165 // cell fate commitment // inferred from sequence or structural similarity /// 0045165 // cell fate commitment // inferred from electronic annotation /// 0045597 // positive regulation of cell differentiation // inferred from electronic annotation /// 0045600 // positive regulation of fat cell differentiation // inferred from sequence or structural similarity /// 0045600 // positive regulation of fat cell differentiation // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from sequence or structural similarity /// 0045666 // positive regulation of neuron differentiation // inferred from electronic annotation /// 0045669 // positive regulation of osteoblast differentiation // inferred from direct assay /// 0045669 // positive regulation of osteoblast differentiation // inferred from electronic annotation /// 0045778 // positive regulation of ossification // inferred from direct assay /// 0045778 // positive regulation of ossification // inferred from electronic annotation /// 0045786 // negative regulation of cell cycle // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048711 // positive regulation of astrocyte differentiation // inferred from sequence or structural similarity /// 0048711 // positive regulation of astrocyte differentiation // inferred from electronic annotation /// 0048762 // mesenchymal cell differentiation // inferred from direct assay /// 0048839 // inner ear development // inferred from sequence or structural similarity /// 0048839 // inner ear development // inferred from electronic annotation /// 0050769 // positive regulation of neurogenesis // inferred from electronic annotation /// 0051216 // cartilage development // inferred from electronic annotation /// 0055008 // cardiac muscle tissue morphogenesis // inferred from sequence or structural similarity /// 0055008 // cardiac muscle tissue morphogenesis // inferred from electronic annotation /// 0060039 // pericardium development // inferred from sequence or structural similarity /// 0060039 // pericardium development // inferred from electronic annotation /// 0060128 // corticotropin hormone secreting cell differentiation // inferred from sequence or structural similarity /// 0060128 // corticotropin hormone secreting cell differentiation // inferred from electronic annotation /// 0060129 // thyroid-stimulating hormone-secreting cell differentiation // inferred from sequence or structural similarity /// 0060129 // thyroid-stimulating hormone-secreting cell differentiation // inferred from electronic annotation /// 0060317 // cardiac epithelial to mesenchymal transition // inferred from direct assay /// 0060389 // pathway-restricted SMAD protein phosphorylation // inferred from direct assay /// 0060395 // SMAD protein signal transduction // inferred from direct assay /// 0060804 // positive regulation of Wnt receptor signaling pathway by BMP signaling pathway // inferred from sequence or structural similarity /// 0060804 // positive regulation of Wnt receptor signaling pathway by BMP signaling pathway // inferred from electronic annotation /// 0061036 // positive regulation of cartilage development // inferred from direct assay /// 0061036 // positive regulation of cartilage development // inferred from electronic annotation /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation /// 0071407 // cellular response to organic cyclic compound // inferred from electronic annotation /// 0072138 // mesenchymal cell proliferation involved in ureteric bud development // inferred from sequence or structural similarity /// 0072138 // mesenchymal cell proliferation involved in ureteric bud development // inferred from electronic annotation /// 2000065 // negative regulation of cortisol biosynthetic process // inferred from direct assay /// 2000726 // negative regulation of cardiac muscle cell differentiation // inferred from direct assay","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0031988 // membrane-bounded vesicle // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0004745 // retinol dehydrogenase activity // inferred from sequence or structural similarity /// 0004745 // retinol dehydrogenase activity // inferred from electronic annotation /// 0005102 // receptor binding // traceable author statement /// 0005102 // receptor binding // inferred from electronic annotation /// 0005125 // cytokine activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // inferred from electronic annotation /// 0019211 // phosphatase activator activity // inferred from direct assay /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0046332 // SMAD binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from direct assay /// 0070700 // BMP receptor binding // inferred from direct assay","chr20:6748335-6760923 (+) // 96.97 // p12.3"]
["11744816_a_at",0.083432674,-0.20358467,-0.13007545,0.34431696,-0.083432674,0.20324326,0.5794328,0.19336684,-1.1794534,-0.23811838,1.1794534,"down","RAPH1",65059.0,"0007160 // cell-matrix adhesion // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030175 // filopodium // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005543 // phospholipid binding // inferred from electronic annotation","chr2:204309244-204400058 (-) // 96.92 // q33.2"]
["11747118_a_at",0.029203892,0.10012865,-0.024449348,0.024449348,-0.053649426,-0.05025983,0.62068313,0.23657678,1.0435123,0.061447665,1.0435123,"up","DBC1",1620.0,"0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0008219 // cell death // inferred from direct assay /// 0045786 // negative regulation of cell cycle // inferred from direct assay","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr9:121928910-122131580 (-) // 96.37 // q33.1"]
["11740687_a_at",0.015807152,0.07055378,-0.015807152,0.15238929,-0.12875032,-0.02940178,0.9270163,0.78232694,1.0177892,0.02543885,1.0177892,"up","IQCH",64799.0,"","","","chr15:67547142-67794139 (+) // 97.53 // q23"]
["11760544_at",-0.012012005,0.012012005,0.032260895,-0.033941746,0.045274734,-0.08085251,0.76037467,0.4330726,1.023795,0.033926878,1.023795,"up","FAM160A2",84067.0,"0006810 // transport // inferred from electronic annotation /// 0007032 // endosome organization // inferred from mutant phenotype /// 0007040 // lysosome organization // inferred from mutant phenotype /// 0008333 // endosome to lysosome transport // inferred from mutant phenotype /// 0015031 // protein transport // inferred from electronic annotation /// 0045022 // early endosome to late endosome transport // inferred from mutant phenotype","0070695 // FHF complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr11:6237799-6255866 (-) // 97.4 // p15.4"]
["11721384_at",-0.084433556,-0.06715727,0.37978125,0.21597624,-0.037695885,0.037695885,0.99458206,0.981991,1.0028261,0.0040714424,1.0028261,"up","ATG2B",55102.0,"","","","chr14:96747594-96829701 (-) // 99.76 // q32.2"]
["11751567_a_at",-0.012737274,0.05160904,0.012737274,0.022078514,-0.22588992,-0.041483164,0.64423543,0.26636538,1.071007,0.098967925,1.071007,"up","EGR3",1960.0,"0001938 // positive regulation of endothelial cell proliferation // inferred from mutant phenotype /// 0002042 // cell migration involved in sprouting angiogenesis // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007274 // neuromuscular synaptic transmission // inferred from electronic annotation /// 0007422 // peripheral nervous system development // inferred from electronic annotation /// 0007517 // muscle organ development // traceable author statement /// 0007623 // circadian rhythm // traceable author statement /// 0035767 // endothelial cell chemotaxis // inferred from mutant phenotype /// 0035924 // cellular response to vascular endothelial growth factor stimulus // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0044344 // cellular response to fibroblast growth factor stimulus // inferred from mutant phenotype","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:22547664-22550090 (-) // 99.91 // p21.3"]
["11736789_at",-0.065280676,-0.08314419,0.07739782,-0.06992078,0.065280676,0.13172531,0.76704484,0.44544175,-1.0468374,-0.06603744,1.0468374,"down","FBXO4",26272.0,"0000209 // protein polyubiquitination // inferred from direct assay /// 0000723 // telomere maintenance // inferred from mutant phenotype /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0031146 // SCF-dependent proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0031398 // positive regulation of protein ubiquitination // inferred from direct assay","0000151 // ubiquitin ligase complex // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0019005 // SCF ubiquitin ligase complex // inferred from direct assay","0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction","chr5:41925355-41935423 (+) // 83.91 // p13.1"]
["11729599_a_at",-0.29349852,0.16073632,-0.0038161278,-0.09951091,0.0038161278,0.023704767,0.9622385,0.8837134,-1.0150349,-0.021529352,1.0150349,"down","GABRG2",2566.0,"0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006821 // chloride transport // inferred from electronic annotation /// 0007214 // gamma-aminobutyric acid signaling pathway // inferred from electronic annotation /// 0007214 // gamma-aminobutyric acid signaling pathway // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007268 // synaptic transmission // inferred from electronic annotation /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0030534 // adult behavior // inferred from electronic annotation /// 0034220 // ion transmembrane transport // traceable author statement /// 0051932 // synaptic transmission, GABAergic // inferred from sequence or structural similarity /// 0055085 // transmembrane transport // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0032590 // dendrite membrane // inferred from sequence or structural similarity /// 0034707 // chloride channel complex // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004890 // GABA-A receptor activity // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005230 // extracellular ligand-gated ion channel activity // inferred from electronic annotation /// 0005254 // chloride channel activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008503 // benzodiazepine receptor activity // traceable author statement","chr5:161494328-161582532 (+) // 92.87 // q34"]
["11742738_a_at",-0.0032720566,0.073657036,-0.16304731,0.07920313,0.0032720566,-0.03380251,0.8352921,0.5748476,-1.0331943,-0.047111593,1.0331943,"down","BBS9",27241.0,"0007601 // visual perception // inferred from electronic annotation /// 0045444 // fat cell differentiation // inferred from sequence or structural similarity /// 0045444 // fat cell differentiation // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0034464 // BBSome // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation /// 0060170 // cilium membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr7:33169151-33645680 (+) // 99.98 // p14.3"]
["11760785_s_at",-0.008354902,-0.10107136,0.058504343,0.008354664,0.39727235,-0.4130888,0.9863795,0.95448387,-1.010092,-0.014486729,1.010092,"down","GRK5",2869.0,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007188 // adenylate cyclase-modulating G-protein coupled receptor signaling pathway // traceable author statement /// 0007217 // tachykinin receptor signaling pathway // inferred from direct assay /// 0008277 // regulation of G-protein coupled receptor protein signaling pathway // traceable author statement /// 0008277 // regulation of G-protein coupled receptor protein signaling pathway // inferred from electronic annotation /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0038032 // termination of G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from direct assay","0005625 // soluble fraction // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004703 // G-protein coupled receptor kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005080 // protein kinase C binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // traceable author statement /// 0008289 // lipid binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr10:121211644-121215841 (+) // 93.5 // q26.11"]
["11724295_at",0.0037250519,-0.0037250519,0.06414366,-0.079565525,0.15088129,-0.29392576,0.8000148,0.50363356,1.0684983,0.09558455,1.0684983,"up","TSPAN18",90139.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr11:44748416-44953972 (+) // 80.12 // p11.2"]
["11726053_a_at",0.101475716,0.036952972,0.04607582,-0.16111088,-0.036952972,-0.11280537,0.23904364,0.016255645,1.1212629,0.1651246,1.1212629,"up","C19orf24",55009.0,"","0005737 // cytoplasm // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0044421 // extracellular region part // inferred from direct assay","","chr19:1275443-1279227 (+) // 90.56 // p13.3"]
["11719829_a_at",-0.0010051727,-0.0073165894,-0.08852434,0.0020399094,0.056254864,0.0010051727,0.5822168,0.19598739,-1.0367361,-0.052048746,1.0367361,"down","SLC26A11",284129.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0008272 // sulfate transport // inferred from direct assay /// 0008272 // sulfate transport // inferred from electronic annotation","0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation","0008271 // secondary active sulfate transmembrane transporter activity // inferred from electronic annotation /// 0008509 // anion transmembrane transporter activity // inferred from direct assay /// 0015116 // sulfate transmembrane transporter activity // inferred from electronic annotation /// 0015301 // anion:anion antiporter activity // inferred from electronic annotation","chr17:78194199-78227301 (+) // 93.51 // q25.3"]
["11723434_a_at",-0.10239506,0.00356102,-0.00356102,-0.038819313,0.071546555,0.05998802,0.63465106,0.25466356,-1.0461116,-0.065036744,1.0461116,"down","TBC1D22A",25771.0,"0032313 // regulation of Rab GTPase activity // inferred from electronic annotation /// 0032851 // positive regulation of Rab GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005097 // Rab GTPase activator activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay","chr22:47158517-47571336 (+) // 99.08 // q13.31"]
["11731496_at",-0.12869978,0.062755585,0.006397724,0.13152885,-0.038559437,-0.006397724,0.8300849,0.56199414,-1.0343368,-0.04870604,1.0343368,"down","INHBA",3624.0,"0000082 // G1/S transition of mitotic cell cycle // inferred from direct assay /// 0001541 // ovarian follicle development // inferred from genetic interaction /// 0001541 // ovarian follicle development // non-traceable author statement /// 0001707 // mesoderm formation // inferred from electronic annotation /// 0001942 // hair follicle development // inferred from genetic interaction /// 0002244 // hemopoietic progenitor cell differentiation // inferred from direct assay /// 0002244 // hemopoietic progenitor cell differentiation // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006917 // induction of apoptosis // inferred from direct assay /// 0006917 // induction of apoptosis // inferred from sequence or structural similarity /// 0006952 // defense response // traceable author statement /// 0007050 // cell cycle arrest // inferred from direct assay /// 0007050 // cell cycle arrest // inferred from sequence or structural similarity /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0007399 // nervous system development // non-traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0008584 // male gonad development // inferred from genetic interaction /// 0010862 // positive regulation of pathway-restricted SMAD protein phosphorylation // inferred from direct assay /// 0030154 // cell differentiation // traceable author statement /// 0030218 // erythrocyte differentiation // non-traceable author statement /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0032925 // regulation of activin receptor signaling pathway // inferred from direct assay /// 0040007 // growth // inferred from electronic annotation /// 0042326 // negative regulation of phosphorylation // traceable author statement /// 0042476 // odontogenesis // inferred from genetic interaction /// 0042541 // hemoglobin biosynthetic process // inferred from direct assay /// 0042541 // hemoglobin biosynthetic process // inferred from sequence or structural similarity /// 0042701 // progesterone secretion // inferred from genetic interaction /// 0045077 // negative regulation of interferon-gamma biosynthetic process // traceable author statement /// 0045578 // negative regulation of B cell differentiation // traceable author statement /// 0045648 // positive regulation of erythrocyte differentiation // inferred from direct assay /// 0045650 // negative regulation of macrophage differentiation // traceable author statement /// 0045786 // negative regulation of cell cycle // inferred from direct assay /// 0045786 // negative regulation of cell cycle // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046880 // regulation of follicle-stimulating hormone secretion // inferred from genetic interaction /// 0046881 // positive regulation of follicle-stimulating hormone secretion // traceable author statement /// 0046882 // negative regulation of follicle-stimulating hormone secretion // non-traceable author statement /// 0048333 // mesodermal cell differentiation // inferred from electronic annotation /// 0051799 // negative regulation of hair follicle development // inferred from direct assay /// 0060021 // palate development // inferred from genetic interaction /// 0060279 // positive regulation of ovulation // inferred from sequence or structural similarity /// 0060279 // positive regulation of ovulation // inferred from electronic annotation /// 0061029 // eyelid development in camera-type eye // inferred from sequence or structural similarity /// 0061029 // eyelid development in camera-type eye // inferred from electronic annotation /// 0071372 // cellular response to follicle-stimulating hormone stimulus // inferred from electronic annotation /// 0071397 // cellular response to cholesterol // inferred from electronic annotation","0005576 // extracellular region // inferred from direct assay /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005576 // extracellular region // inferred from sequence or structural similarity /// 0043509 // activin A complex // inferred from direct assay /// 0043512 // inhibin A complex // inferred from direct assay /// 0043512 // inhibin A complex // inferred from electronic annotation","0005102 // receptor binding // inferred from electronic annotation /// 0005125 // cytokine activity // inferred from direct assay /// 0005125 // cytokine activity // inferred from sequence or structural similarity /// 0005179 // hormone activity // traceable author statement /// 0005179 // hormone activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // traceable author statement /// 0008083 // growth factor activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from sequence or structural similarity /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0070699 // type II activin receptor binding // inferred from physical interaction","chr7:41728127-41742706 (-) // 87.58 // p14.1"]
["11762529_at",-0.06612301,0.17719603,0.18466806,0.06612325,-0.14301705,-0.06612301,0.6125039,0.22697178,1.1066911,0.14625262,1.1066911,"up","FERMT1",55612.0,"0007155 // cell adhesion // inferred from direct assay /// 0007155 // cell adhesion // inferred from electronic annotation /// 0043616 // keratinocyte proliferation // inferred from direct assay /// 0051546 // keratinocyte migration // inferred from direct assay /// 0090162 // establishment of epithelial cell polarity // inferred from direct assay","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from direct assay /// 0030054 // cell junction // inferred from electronic annotation /// 0031941 // filamentous actin // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005543 // phospholipid binding // inferred from electronic annotation","chr20:6067970-6103861 (-) // 86.85 // p12.3"]
["11724786_s_at",0.116867065,0.056947708,0.08899784,-0.056947708,-0.15214252,-0.13026905,0.1429351,0.003941241,1.149275,0.20072398,1.149275,"up","C14orf129",51527.0,"","0005737 // cytoplasm // inferred from electronic annotation","","chr14:96830716-96853623 (+) // 83.97 // q32.2"]
["11716466_s_at",-0.005402565,-0.0066919327,0.005402565,0.06433964,0.08415222,-0.06213379,0.81712264,0.53691626,-1.0217319,-0.03101662,1.0217319,"down","ISCA1",81689.0,"0016226 // iron-sulfur cluster assembly // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation","0005198 // structural molecule activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation","chr9:88879460-88897676 (-) // 88.73 // q21.33"]
["11758177_x_at",0.010083199,0.11111212,0.19868517,-0.010083199,-0.020963669,-0.038733006,0.42203677,0.07799054,1.0942079,0.12988685,1.0942079,"up","LRWD1 /// MIR4467","100616367 /// 222229","0000080 // G1 phase of mitotic cell cycle // inferred from mutant phenotype /// 0006260 // DNA replication // inferred from electronic annotation /// 0006270 // DNA-dependent DNA replication initiation // traceable author statement /// 0006325 // chromatin organization // inferred from mutant phenotype /// 0016568 // chromatin modification // inferred from electronic annotation /// 0071169 // establishment of protein localization to chromatin // inferred from direct assay","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000781 // chromosome, telomeric region // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005664 // nuclear origin of replication recognition complex // inferred from direct assay /// 0005694 // chromosome // inferred from electronic annotation /// 0005721 // centromeric heterochromatin // inferred from direct assay /// 0031933 // telomeric heterochromatin // inferred from direct assay","0003682 // chromatin binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008327 // methyl-CpG binding // inferred from direct assay /// 0035064 // methylated histone residue binding // inferred from direct assay","chr7:102113157-102113597 (+) // 92.24 // q22.1"]
["11754839_x_at",0.002439022,-0.05326891,0.023089886,0.012278557,-0.002439022,-0.05702114,0.9491122,0.8448914,1.004502,0.0064805197,1.004502,"up","USP54",159195.0,"0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation","","0004221 // ubiquitin thiolesterase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation","chr10:75258052-75313098 (-) // 92.84 // q22.2"]
["11729640_at",-0.009054184,0.069984436,0.112092495,-0.073096275,0.009054184,-0.013472557,0.49821153,0.12500873,1.0595946,0.08351244,1.0595946,"up","C12orf43",64897.0,"","","","chr12:121440678-121454304 (-) // 77.3 // q24.31"]
["11731165_at",-0.11404991,0.05800104,-0.21494007,-0.048214912,0.048214912,0.10972214,0.62297046,0.23981191,-1.0919477,-0.12690373,1.0919477,"down","FGF19",9965.0,"0001755 // neural crest cell migration // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0007507 // heart development // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from genetic interaction /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from genetic interaction /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from physical interaction /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0046326 // positive regulation of glucose import // inferred from direct assay /// 0046330 // positive regulation of JNK cascade // inferred from direct assay /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from direct assay /// 0070858 // negative regulation of bile acid biosynthetic process // inferred from direct assay","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation","0005104 // fibroblast growth factor receptor binding // inferred from physical interaction /// 0005104 // fibroblast growth factor receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // inferred from electronic annotation","chr11:69513005-69519410 (-) // 93.09 // q13.3"]
["11758435_s_at",0.020534515,-0.014913559,0.014913559,-0.020900726,-0.018182755,0.027532578,0.8510873,0.60681427,1.0074408,0.010695072,1.0074408,"up","OGFOD1",55239.0,"0055114 // oxidation-reduction process // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0005506 // iron ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016702 // oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen // inferred from electronic annotation /// 0016705 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen // inferred from electronic annotation /// 0016706 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors // inferred from electronic annotation /// 0031418 // L-ascorbic acid binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:56510888-56511406 (+) // 66.8 // q12.2"]
["11728625_a_at",-0.07687664,0.09196377,0.010714531,-0.010714531,0.06293583,-0.12369251,0.8835942,0.679703,1.0227293,0.032424305,1.0227293,"up","SLC22A12",116085.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0015747 // urate transport // inferred from direct assay /// 0015747 // urate transport // inferred from electronic annotation /// 0019725 // cellular homeostasis // non-traceable author statement /// 0042493 // response to drug // inferred from direct assay /// 0046415 // urate metabolic process // inferred from mutant phenotype /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from direct assay /// 0031526 // brush border membrane // inferred from sequence or structural similarity /// 0031526 // brush border membrane // non-traceable author statement /// 0031526 // brush border membrane // inferred from electronic annotation","0015143 // urate transmembrane transporter activity // inferred from direct assay /// 0015143 // urate transmembrane transporter activity // inferred from electronic annotation /// 0022857 // transmembrane transporter activity // inferred from electronic annotation /// 0030165 // PDZ domain binding // inferred from physical interaction","chr11:64358281-64369816 (+) // 98.1 // q13.1"]
["11721922_at",0.012590885,-0.14240313,-0.012590647,-0.053067923,0.119960785,0.026518583,0.6859127,0.32021484,-1.0559963,-0.07860478,1.0559963,"down","PRKCB",5579.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0010829 // negative regulation of glucose transport // inferred from sequence or structural similarity /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0030949 // positive regulation of vascular endothelial growth factor receptor signaling pathway // inferred from sequence or structural similarity /// 0035408 // histone H3-T6 phosphorylation // inferred from direct assay /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0042113 // B cell activation // inferred from sequence or structural similarity /// 0042953 // lipoprotein transport // traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from sequence or structural similarity /// 0045766 // positive regulation of angiogenesis // inferred from sequence or structural similarity /// 0046627 // negative regulation of insulin receptor signaling pathway // inferred from sequence or structural similarity /// 0050853 // B cell receptor signaling pathway // inferred from sequence or structural similarity /// 0050861 // positive regulation of B cell receptor signaling pathway // inferred from sequence or structural similarity /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from sequence or structural similarity","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004697 // protein kinase C activity // inferred from electronic annotation /// 0004697 // protein kinase C activity // traceable author statement /// 0005080 // protein kinase C binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0030374 // ligand-dependent nuclear receptor transcription coactivator activity // inferred from mutant phenotype /// 0035403 // histone kinase activity (H3-T6 specific) // inferred from direct assay /// 0042393 // histone binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050681 // androgen receptor binding // inferred from direct assay","chr16:23846527-24231932 (+) // 90.25 // p12.2"]
["11728295_a_at",-0.12549496,0.07320213,-0.0022015572,-0.024504185,0.002202034,0.06846094,0.8601774,0.62868965,-1.0235283,-0.033551045,1.0235283,"down","PKIG",11142.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006469 // negative regulation of protein kinase activity // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0042308 // negative regulation of protein import into nucleus // inferred from electronic annotation","0005625 // soluble fraction // inferred from electronic annotation","0004860 // protein kinase inhibitor activity // inferred from electronic annotation /// 0004862 // cAMP-dependent protein kinase inhibitor activity // inferred from electronic annotation /// 0004862 // cAMP-dependent protein kinase inhibitor activity // traceable author statement /// 0016301 // kinase activity // inferred from electronic annotation","chr20:43160435-43247678 (+) // 93.54 // q13.12"]
["11725952_at",0.09521723,0.07103777,0.0554657,-0.11379099,-0.08989954,-0.05546522,0.101453066,0.0014445097,1.1175134,0.16029215,1.1175134,"up","RNF10",9921.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0010626 // negative regulation of Schwann cell proliferation // inferred from sequence or structural similarity /// 0031643 // positive regulation of myelination // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:120972127-121015396 (+) // 93.91 // q24.31"]
["11746231_x_at",0.006442547,-0.099552155,0.033467293,-0.006442547,0.041321754,-0.059460163,0.9426305,0.8264882,-1.0081338,-0.011687082,1.0081338,"down","ZMYM6",9204.0,"0007010 // cytoskeleton organization // inferred from mutant phenotype /// 0007275 // multicellular organismal development // traceable author statement /// 0022604 // regulation of cell morphogenesis // inferred from mutant phenotype","0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:35482849-35497569 (-) // 78.02 // p34.3"]
["11748175_x_at",0.0073952675,-0.0073947906,0.010019779,-0.13645506,0.010407448,-0.08005571,0.5541976,0.17006837,1.0512029,0.072041154,1.0512029,"up","C19orf54",284325.0,"","","","chr19:41246766-41256458 (-) // 76.86 // q13.2"]
["11756780_a_at",0.05283618,-0.1386764,-0.03216052,0.03216052,0.17266536,-0.039265394,0.6858226,0.3200652,-1.0677104,-0.09452039,1.0677104,"down","MS4A7",58475.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation","chr11:60146004-60157458 (+) // 99.89 // q12.2"]
["11749752_x_at",0.034642696,-0.017621994,0.07108164,0.0035586357,-0.19253206,-0.0035586357,0.62953895,0.247697,1.0669886,0.093544744,1.0669886,"up","WIPF1",7456.0,"0006461 // protein complex assembly // traceable author statement /// 0008154 // actin polymerization or depolymerization // traceable author statement /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030048 // actin filament-based movement // inferred from electronic annotation /// 0046827 // positive regulation of protein export from nucleus // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005884 // actin filament // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0003779 // actin binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005522 // profilin binding // traceable author statement","chr2:175426773-175499312 (-) // 94.99 // q31.1"]
["11752288_a_at",-0.012603521,0.048033237,0.105232954,-0.29113054,-0.090192795,0.012603521,0.53154916,0.14991648,1.124898,0.16979413,1.124898,"up","FAM125B",89853.0,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0005768 // endosome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031902 // late endosome membrane // inferred from electronic annotation","","chr9:129089147-129269319 (+) // 92.91 // q33.3"]
["11722711_a_at",-0.031644344,-0.046644688,-0.0064382553,0.0457983,0.24425459,0.006438732,0.5469774,0.1633679,-1.0920758,-0.12707302,1.0920758,"down","PPOX",5498.0,"0006778 // porphyrin-containing compound metabolic process // traceable author statement /// 0006779 // porphyrin-containing compound biosynthetic process // inferred from direct assay /// 0006779 // porphyrin-containing compound biosynthetic process // inferred from electronic annotation /// 0006782 // protoporphyrinogen IX biosynthetic process // inferred from electronic annotation /// 0006783 // heme biosynthetic process // inferred from direct assay /// 0006783 // heme biosynthetic process // traceable author statement /// 0006783 // heme biosynthetic process // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046501 // protoporphyrinogen IX metabolic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005758 // mitochondrial intermembrane space // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0031304 // intrinsic to mitochondrial inner membrane // inferred from sequence or structural similarity /// 0031304 // intrinsic to mitochondrial inner membrane // inferred from electronic annotation /// 0031305 // integral to mitochondrial inner membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from mutant phenotype","0000166 // nucleotide binding // inferred from electronic annotation /// 0004729 // oxygen-dependent protoporphyrinogen oxidase activity // inferred from direct assay /// 0004729 // oxygen-dependent protoporphyrinogen oxidase activity // traceable author statement /// 0004729 // oxygen-dependent protoporphyrinogen oxidase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0050660 // flavin adenine dinucleotide binding // traceable author statement","chr1:161136170-161141008 (+) // 97.26 // q23.3"]
["11737448_x_at",-0.0034341812,0.0034337044,0.23341799,-0.057999134,-0.3559127,0.05682373,0.62953895,0.24766146,1.1461812,0.19683518,1.1461812,"up","DNAJC22",79962.0,"0006457 // protein folding // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0031072 // heat shock protein binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // inferred from electronic annotation","chr12:49741040-49745927 (+) // 82.77 // q13.12"]
["11744111_a_at",-0.02052164,0.04598713,-0.068909645,-0.01754427,0.017544746,0.07569456,0.74462396,0.40792182,-1.0279094,-0.039713107,1.0279094,"down","KIAA0195",9772.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr17:73452247-73496532 (+) // 98.87 // q25.1"]
["11738683_a_at",0.072135925,0.012887955,0.067783356,-0.017871857,-0.063765526,-0.012887955,0.29850844,0.03004711,1.0588104,0.082444206,1.0588104,"up","NARR /// RAB34","100861437 /// 83871","0006184 // GTP catabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006897 // endocytosis // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0001726 // ruffle // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0019001 // guanyl nucleotide binding // inferred from electronic annotation","chr17:27041302-27045286 (-) // 92.63 // q11.2"]
["11758713_s_at",0.030700684,-0.05082941,-0.090008736,-0.030700684,0.10525417,0.060219765,0.5883234,0.20176533,-1.058218,-0.08163687,1.058218,"down","RP1L1",94137.0,"0007601 // visual perception // inferred from electronic annotation /// 0030030 // cell projection organization // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0042461 // photoreceptor cell development // inferred from sequence or structural similarity /// 0042461 // photoreceptor cell development // inferred from electronic annotation /// 0045494 // photoreceptor cell maintenance // inferred from sequence or structural similarity /// 0045494 // photoreceptor cell maintenance // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation","0001750 // photoreceptor outer segment // inferred from sequence or structural similarity /// 0001750 // photoreceptor outer segment // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0032391 // photoreceptor connecting cilium // inferred from sequence or structural similarity /// 0032391 // photoreceptor connecting cilium // inferred from electronic annotation /// 0035085 // cilium axoneme // inferred from sequence or structural similarity /// 0035085 // cilium axoneme // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr8:10463858-10464350 (-) // 99.59 // p23.1"]
["11733680_a_at",0.08146858,-0.05564475,0.00840807,0.13390017,-0.008407831,-0.027218103,0.91616035,0.7571574,-1.0149069,-0.021347368,1.0149069,"down","TMEM132D",121256.0,"0010923 // negative regulation of phosphatase activity // inferred from direct assay","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr12:129556275-130388213 (-) // 96.87 // q24.33"]
["11717282_at",0.103770256,0.05774021,0.14064598,-0.1339922,-0.05774021,-0.116713524,0.138353,0.0036216304,1.1515157,0.20353411,1.1515157,"up","ASAP1",50807.0,"0007165 // signal transduction // inferred from electronic annotation /// 0030030 // cell projection organization // inferred from electronic annotation /// 0032312 // regulation of ARF GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0046847 // filopodium assembly // inferred from electronic annotation /// 0060271 // cilium morphogenesis // inferred from mutant phenotype","0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0008060 // ARF GTPase activator activity // inferred from electronic annotation /// 0008093 // cytoskeletal adaptor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:131064352-131456099 (-) // 98.96 // q24.21"]
["11719471_at",-0.054843903,-0.010599136,0.010599136,0.01546669,-0.07220268,0.08204937,0.85294455,0.61207944,-1.0186929,-0.026719125,1.0186929,"down","DCP1A",55802.0,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // inferred from electronic annotation /// 0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0043928 // exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay // traceable author statement","0000932 // cytoplasmic mRNA processing body // inferred from sequence or structural similarity /// 0000932 // cytoplasmic mRNA processing body // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction","chr3:53317442-53381654 (-) // 94.34 // p21.1"]
["11725778_a_at",-0.020740986,0.14693832,-0.25277424,-0.07540655,0.22201109,0.020740986,0.8172054,0.53704864,-1.0702695,-0.09797408,1.0702695,"down","PRDM2",7799.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0032259 // methylation // inferred from electronic annotation /// 0032355 // response to estradiol stimulus // inferred from electronic annotation /// 0034968 // histone lysine methylation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008270 // zinc ion binding // non-traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0018024 // histone-lysine N-methyltransferase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:14031108-14151574 (+) // 96.38 // p36.21"]
["11736330_a_at",-0.19140339,0.0328331,-0.010362625,0.010362625,-0.09280729,0.016430855,0.88383573,0.6801073,-1.0240643,-0.034306306,1.0240643,"down","SLC2A11",66035.0,"0006810 // transport // inferred from electronic annotation /// 0008643 // carbohydrate transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation /// 0022857 // transmembrane transporter activity // inferred from electronic annotation /// 0022891 // substrate-specific transmembrane transporter activity // inferred from electronic annotation","chr22:24198889-24227723 (+) // 78.5 // q11.23"]
["11763398_at",3.5381317E-4,0.081970215,-0.12201595,-3.5381317E-4,0.07647514,-0.14132023,0.9770688,0.92690647,1.0059108,0.008502313,1.0059108,"up","LOC100507254",1.00507254E8,"","","","chr6:132455549-132490502 (+) // 98.24 // q23.2"]
["11725986_s_at",0.0025978088,0.019405365,0.009227753,-0.05178547,-0.0025978088,-0.04396057,0.37070072,0.05434664,1.0303907,0.043191534,1.0303907,"up","NONO",4841.0,"0006281 // DNA repair // inferred from electronic annotation /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006397 // mRNA processing // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0016363 // nuclear matrix // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation /// 0042382 // paraspeckles // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction","chrX:70503041-70521016 (+) // 85.38 // q13.1"]
["11735076_a_at",0.039194107,-0.09750652,0.12223148,-0.04774475,0.19280338,-0.039194107,0.9662765,0.8971436,-1.0097386,-0.013981807,1.0097386,"down","CYP2C18",1562.0,"0006805 // xenobiotic metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0004497 // monooxygenase activity // traceable author statement /// 0004497 // monooxygenase activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from electronic annotation /// 0008390 // testosterone 16-alpha-hydroxylase activity // inferred from electronic annotation /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016705 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen // inferred from electronic annotation /// 0019825 // oxygen binding // traceable author statement /// 0020037 // heme binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070330 // aromatase activity // inferred from electronic annotation","chr10:96443250-96495945 (+) // 94.18 // q23.33"]
["11718009_a_at",0.018204212,0.037750244,-0.018204212,-0.071455956,-0.082476616,0.02016735,0.5774745,0.19166143,1.0404242,0.0571719,1.0404242,"up","STX18",53407.0,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006888 // ER to Golgi vesicle-mediated transport // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005484 // SNAP receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr4:4420667-4543790 (-) // 98.24 // p16.3"]
["11721657_at",0.10671353,0.036533594,0.019551039,-0.019551039,-0.06580806,-0.05420518,0.29352236,0.028550744,1.0723586,0.10078744,1.0723586,"up","LMO4",8543.0,"0001843 // neural tube closure // inferred from sequence or structural similarity /// 0001843 // neural tube closure // inferred from electronic annotation /// 0003281 // ventricular septum development // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0021514 // ventral spinal cord interneuron differentiation // inferred from electronic annotation /// 0021522 // spinal cord motor neuron differentiation // inferred from electronic annotation /// 0021527 // spinal cord association neuron differentiation // inferred from electronic annotation /// 0031333 // negative regulation of protein complex assembly // inferred from electronic annotation /// 0042659 // regulation of cell fate specification // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048538 // thymus development // inferred from electronic annotation /// 0050865 // regulation of cell activation // inferred from electronic annotation","0005667 // transcription factor complex // inferred from sequence or structural similarity /// 0005667 // transcription factor complex // inferred from electronic annotation","0001158 // enhancer sequence-specific DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from sequence or structural similarity /// 0008134 // transcription factor binding // inferred from sequence or structural similarity /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:87794149-87814604 (+) // 95.44 // p22.3"]
["11748556_a_at",-0.028364182,-0.041274548,0.062314034,0.044135094,0.028364182,-0.11062956,0.95783234,0.87026656,1.007143,0.01026857,1.007143,"up","SARNP",84324.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay","0003676 // nucleic acid binding // non-traceable author statement /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0008022 // protein C-terminus binding // inferred from electronic annotation /// 0050733 // RS domain binding // inferred from electronic annotation","chr12:56146365-56197514 (-) // 86.72 // q13.2"]
["11755029_a_at",-0.026796341,0.026796341,-0.06042862,-0.14320374,0.16615248,0.06247425,0.86288065,0.63365674,-1.0342731,-0.048617244,1.0342731,"down","C17orf28",283987.0,"","0000139 // Golgi membrane // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation","","chr17:72946837-72951440 (-) // 86.35 // q25.1"]
["11738454_at",0.0304389,-0.14680672,0.07855439,-0.0304389,0.07885313,-0.079734325,0.9939923,0.9804478,-1.0015014,-0.002164497,1.0015014,"down","ACTBL2",345651.0,"","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation","chr5:56775842-56778638 (-) // 99.29 // q11.2"]
["11753326_a_at",-0.0033783913,-0.17342138,0.034219265,-0.088593006,0.003378868,0.13433981,0.80929255,0.52084833,-1.0452892,-0.06390209,1.0452892,"down","GPR157",80045.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation","chr1:9164389-9189183 (-) // 99.8 // p36.23"]
["11729288_at",-0.018588543,-0.090970516,-0.0052547455,0.11737728,0.0052547455,0.103428364,0.38974684,0.061939728,-1.0819432,-0.1136247,1.0819432,"down","MSL3",10943.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0007275 // multicellular organismal development // traceable author statement /// 0016568 // chromatin modification // inferred from electronic annotation /// 0043984 // histone H4-K16 acetylation // inferred from direct assay","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0072487 // MSL complex // inferred from direct assay","0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0035064 // methylated histone residue binding // inferred from direct assay","chrX:11776277-11786410 (+) // 71.57 // p22.2"]
["11735174_a_at",0.030872345,-0.00401783,0.010290146,0.0032596588,-0.056275368,-0.0032596588,0.6055837,0.21932533,1.0218192,0.031139996,1.0218192,"up","IL32",9235.0,"0006952 // defense response // traceable author statement /// 0006955 // immune response // traceable author statement /// 0007155 // cell adhesion // traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement","0005125 // cytokine activity // inferred from electronic annotation","chr16:3115639-3119820 (+) // 71.35 // p13.3"]
["11728854_at",-0.048882723,-0.08154106,-0.09496164,0.12295842,0.10867548,0.048882723,0.13124941,0.0031244336,-1.1239938,-0.16863401,1.1239938,"down","C2orf77",129881.0,"","","","chr2:170501934-170550933 (-) // 88.08 // q31.1"]
["11755204_s_at",-0.075529575,-0.0342803,-0.39646053,0.0799222,0.17475319,0.0342803,0.4495218,0.09498247,-1.2016988,-0.2650753,1.2016988,"down","CTAG2",30848.0,"","0005813 // centrosome // inferred from direct assay","","chrX:153880251-153881590 (-) // 91.31 // q28"]
["11727129_at",-0.028561592,-0.057813168,-0.033404827,0.14218283,0.17004633,0.028561592,0.28150225,0.025520435,-1.1122826,-0.15352343,1.1122826,"down","MAGEB2",4113.0,"","","","chrX:30233686-30238204 (+) // 97.86 // p21.2"]
["11744870_a_at",0.0140173435,-0.010822773,-0.27992344,0.010823011,-0.057168245,0.09665942,0.7094419,0.35413548,-1.0784912,-0.10901442,1.0784912,"down","SLC1A6",6511.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006835 // dicarboxylic acid transport // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0015810 // aspartate transport // traceable author statement /// 0015813 // L-glutamate transport // traceable author statement /// 0015813 // L-glutamate transport // inferred from electronic annotation /// 0042391 // regulation of membrane potential // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement","0005624 // membrane fraction // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005313 // L-glutamate transmembrane transporter activity // inferred from electronic annotation /// 0015183 // L-aspartate transmembrane transporter activity // traceable author statement /// 0015293 // symporter activity // inferred from electronic annotation /// 0017153 // sodium:dicarboxylate symporter activity // inferred from electronic annotation","chr19:15060842-15121432 (-) // 99.61 // p13.12"]
["11728427_at",9.0169907E-4,9.3460083E-4,-0.025788784,-9.021759E-4,-0.008617401,0.06332636,0.70698994,0.3493949,-1.0181285,-0.025919678,1.0181285,"down","IKBIP",121457.0,"0006917 // induction of apoptosis // inferred from mutant phenotype /// 0010165 // response to X-ray // inferred from expression pattern","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr12:99017813-99038589 (-) // 70.78 // q23.1"]
["11722169_x_at",0.04081154,0.044262886,-0.013877869,0.0040712357,-0.013648033,-0.0040721893,0.6068114,0.22086607,1.0197968,0.028281784,1.0197968,"up","CSE1L",1434.0,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement","0005515 // protein binding // inferred from physical interaction /// 0008262 // importin-alpha export receptor activity // traceable author statement /// 0008565 // protein transporter activity // inferred from electronic annotation","chr20:47662782-47713556 (+) // 99.92 // q13.13"]
["11737176_at",0.097249985,-0.111694574,-0.097249985,0.31461787,-0.11382961,0.26017118,0.6493468,0.27367154,-1.1414634,-0.1908846,1.1414634,"down","C9orf72",203228.0,"0008219 // cell death // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","","chr9:27560086-27573842 (-) // 78.62 // p21.2"]
["11728731_s_at",0.08111858,-0.02771902,0.10815239,-0.10188198,0.02771902,-0.08527136,0.5182294,0.13962708,1.076983,0.10699544,1.076983,"up","DSCC1",79075.0,"0006260 // DNA replication // inferred from electronic annotation /// 0006275 // regulation of DNA replication // inferred from mutant phenotype /// 0007049 // cell cycle // inferred from electronic annotation /// 0034088 // maintenance of mitotic sister chromatid cohesion // inferred from mutant phenotype /// 0034421 // post-translational protein acetylation // inferred from mutant phenotype","0000775 // chromosome, centromeric region // inferred from direct assay /// 0000785 // chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr8:120846181-120868262 (-) // 98.91 // q24.12"]
["11753279_a_at",0.07275295,0.0021619797,0.07422829,-0.03963375,-0.0021619797,-0.018360138,0.37521148,0.055857543,1.0495467,0.06976639,1.0495467,"up","SGK494 /// SPAG5","10615 /// 124923","0000070 // mitotic sister chromatid segregation // inferred from mutant phenotype /// 0000090 // mitotic anaphase // inferred from mutant phenotype /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007049 // cell cycle // non-traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007051 // spindle organization // inferred from mutant phenotype /// 0007051 // spindle organization // non-traceable author statement /// 0007059 // chromosome segregation // inferred from mutant phenotype /// 0007067 // mitosis // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0048015 // phosphatidylinositol-mediated signaling // non-traceable author statement /// 0051301 // cell division // inferred from electronic annotation /// 0051988 // regulation of attachment of spindle microtubules to kinetochore // inferred from mutant phenotype","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from direct assay /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0000922 // spindle pole // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005876 // spindle microtubule // inferred from electronic annotation /// 0035371 // microtubule plus end // inferred from direct assay /// 0072686 // mitotic spindle // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr17:26907029-26941203 (-) // 100.0 // q11.2"]
["11740239_a_at",-0.009413242,0.019081354,0.009413242,0.078817606,-0.059904814,-0.025569439,0.9504756,0.8500232,1.0059644,0.008579249,1.0059644,"up","C15orf26",161502.0,"","","","chr15:81426587-81441515 (+) // 98.55 // q25.1"]
["11728261_a_at",-0.044075012,-0.024568558,0.003856659,0.022497177,0.021232605,-0.003856659,0.4578179,0.09978044,-1.0244763,-0.034886595,1.0244763,"down","ZNF300",91975.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr5:150273960-150284545 (-) // 95.77 // q33.1"]
["11720321_at",0.11379051,0.115169525,0.24171495,-0.1546731,-0.113790035,-0.15066242,0.12209628,0.002602842,1.2282466,0.2966002,1.2282466,"up","AK2",204.0,"0006139 // nucleobase-containing compound metabolic process // inferred from electronic annotation /// 0015949 // nucleobase-containing small molecule interconversion // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046939 // nucleotide phosphorylation // inferred from electronic annotation /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement","0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005758 // mitochondrial intermembrane space // traceable author statement /// 0005758 // mitochondrial intermembrane space // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004017 // adenylate kinase activity // inferred from electronic annotation /// 0004017 // adenylate kinase activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016776 // phosphotransferase activity, phosphate group as acceptor // inferred from electronic annotation /// 0019201 // nucleotide kinase activity // inferred from electronic annotation /// 0019205 // nucleobase-containing compound kinase activity // inferred from electronic annotation","chr1:33473540-33502508 (-) // 80.89 // p35.1"]
["11750357_a_at",-0.019835472,9.16481E-4,-9.16481E-4,0.09598017,0.052672386,-0.06396437,0.8030128,0.5099485,-1.0244441,-0.03484127,1.0244441,"down","ETNK2",55224.0,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0001890 // placenta development // inferred from electronic annotation /// 0006646 // phosphatidylethanolamine biosynthetic process // inferred from electronic annotation /// 0008654 // phospholipid biosynthetic process // inferred from electronic annotation /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0035264 // multicellular organism growth // inferred from electronic annotation","","0000166 // nucleotide binding // inferred from electronic annotation /// 0004305 // ethanolamine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0016773 // phosphotransferase activity, alcohol group as acceptor // inferred from electronic annotation","chr1:204100607-204116088 (-) // 99.86 // q32.1"]
["11724936_a_at",0.08910799,-0.072377205,-0.064195156,-0.020157337,0.03834963,0.020157337,0.8622378,0.63220006,-1.0200251,-0.028604701,1.0200251,"down","C10orf76",79591.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr10:103605355-103815932 (-) // 92.58 // q24.32"]
["11728287_at",-0.0041251183,-0.10333204,-0.056069374,0.0041251183,0.0041251183,0.10183048,0.46383408,0.103349686,-1.0652577,-0.09120244,1.0652577,"down","RHOQ",23433.0,"0006184 // GTP catabolic process // inferred from direct assay /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // inferred from mutant phenotype /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0030866 // cortical actin cytoskeleton organization // inferred from mutant phenotype /// 0030866 // cortical actin cytoskeleton organization // inferred from electronic annotation /// 0032869 // cellular response to insulin stimulus // inferred from mutant phenotype /// 0032869 // cellular response to insulin stimulus // inferred from electronic annotation /// 0032956 // regulation of actin cytoskeleton organization // inferred by curator /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0046326 // positive regulation of glucose import // inferred from mutant phenotype /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement /// 0051491 // positive regulation of filopodium assembly // inferred from direct assay /// 0090005 // negative regulation of establishment of protein localization in plasma membrane // inferred from mutant phenotype /// 0090005 // negative regulation of establishment of protein localization in plasma membrane // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005884 // actin filament // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0045121 // membrane raft // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from direct assay /// 0005522 // profilin binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0032427 // GBD domain binding // inferred from physical interaction","chr2:46769866-46811950 (+) // 93.44 // p21"]
["11763509_at",-0.15221024,0.009561062,-0.09789801,-0.009561062,0.030245781,0.16408825,0.48585093,0.1159275,-1.1032604,-0.14177334,1.1032604,"down","CD9",928.0,"0002576 // platelet degranulation // traceable author statement /// 0006928 // cellular component movement // inferred from direct assay /// 0007155 // cell adhesion // inferred from direct assay /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007338 // single fertilization // inferred from electronic annotation /// 0007342 // fusion of sperm to egg plasma membrane // inferred from direct assay /// 0007342 // fusion of sperm to egg plasma membrane // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0009414 // response to water deprivation // inferred from electronic annotation /// 0014003 // oligodendrocyte development // inferred from electronic annotation /// 0030168 // platelet activation // non-traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0030913 // paranodal junction assembly // inferred from sequence or structural similarity /// 0030913 // paranodal junction assembly // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // non-traceable author statement /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0031092 // platelet alpha granule membrane // traceable author statement","0005178 // integrin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr12:6313523-6315324 (+) // 88.78 // p13.31"]
["11761258_at",-0.13316584,0.008739948,0.115796804,0.069236994,-0.008739948,-0.32287693,0.8363126,0.57796067,1.0603817,0.08458361,1.0603817,"up","EDIL3",10085.0,"0007155 // cell adhesion // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0010811 // positive regulation of cell-substrate adhesion // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","0005178 // integrin binding // traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation","chr5:83343234-83374658 (-) // 95.83 // q14.3"]
["11722646_a_at",0.034585238,-0.021826029,0.021826029,0.059221983,-0.062664986,-0.026791334,0.85536784,0.61770815,1.0150892,0.021606443,1.0150892,"up","MYL1",4632.0,"0006936 // muscle contraction // inferred from direct assay /// 0007517 // muscle organ development // non-traceable author statement /// 0030049 // muscle filament sliding // non-traceable author statement /// 0030049 // muscle filament sliding // traceable author statement /// 0060048 // cardiac muscle contraction // inferred from electronic annotation","0005829 // cytosol // traceable author statement /// 0005859 // muscle myosin complex // non-traceable author statement /// 0016459 // myosin complex // inferred from electronic annotation /// 0030016 // myofibril // inferred from direct assay /// 0030017 // sarcomere // non-traceable author statement /// 0043292 // contractile fiber // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation /// 0008307 // structural constituent of muscle // non-traceable author statement","chr2:211154315-211179921 (-) // 90.37 // q34"]
["11750627_a_at",0.019919395,-0.002770424,0.052776814,-0.20125866,0.0027709007,-0.2584405,0.45105526,0.095726535,1.1294482,0.17561807,1.1294482,"up","HSPA4L",22824.0,"0006457 // protein folding // inferred from sequence or structural similarity /// 0006950 // response to stress // inferred from electronic annotation /// 0006986 // response to unfolded protein // inferred from sequence or structural similarity /// 0006986 // response to unfolded protein // traceable author statement","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from sequence or structural similarity /// 0005524 // ATP binding // inferred from electronic annotation","chr4:128702975-128754197 (+) // 99.8 // q28.1"]
["11755064_x_at",0.011977196,-0.059354305,0.013243675,0.057132244,-0.011977196,-0.10540104,0.9598704,0.8771774,1.0060515,0.008704217,1.0060515,"up","ZNF669",79862.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:247261405-247267663 (-) // 85.93 // q44"]
["11742804_a_at",-0.037709236,0.010592461,0.07688427,-0.071009636,0.024473667,-0.010592461,0.7749233,0.4574567,1.0250057,0.03563193,1.0250057,"up","TEX261",113419.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr2:71213071-71222075 (-) // 65.11 // p13.3"]
["11735540_at",-0.09910631,0.07889414,-0.046418905,-0.032075882,0.032075644,0.059162617,0.8079579,0.5186467,-1.029491,-0.041931145,1.029491,"down","WEE2",494551.0,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0007126 // meiosis // inferred from electronic annotation /// 0007128 // meiotic prophase I // inferred from sequence or structural similarity /// 0007128 // meiotic prophase I // inferred from electronic annotation /// 0007137 // meiotic metaphase II // inferred from sequence or structural similarity /// 0007137 // meiotic metaphase II // inferred from electronic annotation /// 0007143 // female meiosis // inferred from sequence or structural similarity /// 0007143 // female meiosis // inferred from electronic annotation /// 0007343 // egg activation // inferred from sequence or structural similarity /// 0007343 // egg activation // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0035038 // female pronucleus assembly // inferred from sequence or structural similarity /// 0035038 // female pronucleus assembly // inferred from electronic annotation /// 0060283 // negative regulation of oocyte development // inferred from sequence or structural similarity /// 0060283 // negative regulation of oocyte development // inferred from electronic annotation /// 0060631 // regulation of meiosis I // inferred from sequence or structural similarity /// 0060631 // regulation of meiosis I // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004715 // non-membrane spanning protein tyrosine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:141408152-141431071 (+) // 99.74 // q34"]
["11737813_s_at",-0.05351162,-0.007238388,0.054733276,0.007238388,0.09045887,-0.052192688,0.9161767,0.7573772,-1.011975,-0.01717372,1.011975,"down","NNT",23530.0,"0006099 // tricarboxylic acid cycle // traceable author statement /// 0015992 // proton transport // traceable author statement /// 0015992 // proton transport // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005746 // mitochondrial respiratory chain // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003957 // NAD(P)+ transhydrogenase (B-specific) activity // traceable author statement /// 0008746 // NAD(P)+ transhydrogenase activity // not recorded /// 0008750 // NAD(P)+ transhydrogenase (AB-specific) activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0050661 // NADP binding // inferred from direct assay /// 0050661 // NADP binding // inferred from electronic annotation /// 0051287 // NAD binding // traceable author statement","chr5:43603228-43705667 (+) // 99.57 // p12"]
["11739336_at",0.004902363,-0.07173538,0.06822014,-0.013435841,0.048883438,-0.004902363,0.9472632,0.8392832,-1.0067596,-0.009719292,1.0067596,"down","SCYL2",55681.0,"0002092 // positive regulation of receptor internalization // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0008333 // endosome to lysosome transport // inferred from direct assay /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from direct assay /// 2000286 // receptor internalization involved in canonical Wnt receptor signaling pathway // inferred from direct assay /// 2000370 // positive regulation of clathrin-mediated endocytosis // inferred from direct assay","0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030136 // clathrin-coated vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0004672 // protein kinase activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr12:100661049-100735493 (+) // 99.02 // q23.1"]
["11747674_a_at",-0.055453777,0.0802536,-0.008406162,-0.05179262,0.012230396,0.008406162,0.90970504,0.74169856,1.0110469,0.015849903,1.0110469,"up","ATP1A2",477.0,"0001504 // neurotransmitter uptake // inferred from electronic annotation /// 0002026 // regulation of the force of heart contraction // inferred from electronic annotation /// 0002087 // regulation of respiratory gaseous exchange by neurological system process // inferred from electronic annotation /// 0006754 // ATP biosynthetic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // inferred from electronic annotation /// 0006813 // potassium ion transport // non-traceable author statement /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // non-traceable author statement /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0006937 // regulation of muscle contraction // inferred from electronic annotation /// 0006940 // regulation of smooth muscle contraction // inferred from electronic annotation /// 0006942 // regulation of striated muscle contraction // non-traceable author statement /// 0006942 // regulation of striated muscle contraction // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008217 // regulation of blood pressure // inferred from electronic annotation /// 0008344 // adult locomotory behavior // inferred from electronic annotation /// 0008542 // visual learning // inferred from electronic annotation /// 0015672 // monovalent inorganic cation transport // inferred from electronic annotation /// 0015991 // ATP hydrolysis coupled proton transport // inferred from electronic annotation /// 0019229 // regulation of vasoconstriction // inferred from electronic annotation /// 0034220 // ion transmembrane transport // traceable author statement /// 0040011 // locomotion // inferred from electronic annotation /// 0045822 // negative regulation of heart contraction // inferred from electronic annotation /// 0045988 // negative regulation of striated muscle contraction // inferred from electronic annotation /// 0051481 // reduction of cytosolic calcium ion concentration // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement","0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005890 // sodium:potassium-exchanging ATPase complex // inferred by curator /// 0005890 // sodium:potassium-exchanging ATPase complex // inferred from electronic annotation /// 0005901 // caveola // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0042383 // sarcolemma // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0005391 // sodium:potassium-exchanging ATPase activity // inferred from mutant phenotype /// 0005391 // sodium:potassium-exchanging ATPase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0015077 // monovalent inorganic cation transmembrane transporter activity // inferred from electronic annotation /// 0015662 // ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016820 // hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances // inferred from electronic annotation /// 0019829 // cation-transporting ATPase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:160098175-160111248 (+) // 94.74 // q23.2"]
["11753176_a_at",0.0040607452,-0.07544947,-0.0078139305,0.01994276,0.12140417,-0.0040607452,0.575616,0.18973358,-1.0512916,-0.07216287,1.0512916,"down","GTPBP3",84705.0,"0006184 // GTP catabolic process // inferred from electronic annotation /// 0006400 // tRNA modification // inferred from electronic annotation /// 0008033 // tRNA processing // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation","chr19:17448367-17452101 (+) // 79.39 // p13.11"]
["11736843_a_at",-0.004317999,-0.015119314,0.00996542,0.004317999,-0.13694286,0.14402652,0.98065394,0.9360161,-1.0048344,-0.0069577796,1.0048344,"down","KLRAP1",10748.0,"0007166 // cell surface receptor signaling pathway // traceable author statement","0005886 // plasma membrane // traceable author statement","0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // traceable author statement /// 0030246 // carbohydrate binding // inferred from electronic annotation /// 0030246 // carbohydrate binding // traceable author statement","chr12:10741055-10752661 (-) // 68.51 // p13.2"]
["11732641_a_at",0.018747807,-0.018747807,-0.09371519,0.13024092,0.05345106,-0.089127064,0.7607859,0.4341868,-1.044462,-0.06275996,1.044462,"down","JKAMP",51528.0,"0006986 // response to unfolded protein // inferred from electronic annotation /// 0030433 // ER-associated protein catabolic process // inferred from direct assay","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0031625 // ubiquitin protein ligase binding // inferred from physical interaction","chr14:59951160-59972080 (+) // 94.2 // q23.1"]
["11743134_x_at",0.0050911903,0.0434103,-0.0050911903,-0.13199091,-0.0881753,0.02569151,0.5682641,0.18272756,1.0565016,0.07929499,1.0565016,"up","FKBP8",23770.0,"0000413 // protein peptidyl-prolyl isomerization // not recorded /// 0000413 // protein peptidyl-prolyl isomerization // inferred from electronic annotation /// 0001708 // cell fate specification // inferred from electronic annotation /// 0006457 // protein folding // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007224 // smoothened signaling pathway // inferred from electronic annotation /// 0009953 // dorsal/ventral pattern formation // inferred from electronic annotation /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0018208 // peptidyl-proline modification // not recorded /// 0021904 // dorsal/ventral neural tube patterning // inferred from electronic annotation /// 0021915 // neural tube development // inferred from electronic annotation /// 0030510 // regulation of BMP signaling pathway // inferred from electronic annotation /// 0030513 // positive regulation of BMP signaling pathway // inferred from electronic annotation /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0035556 // intracellular signal transduction // traceable author statement /// 0043010 // camera-type eye development // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation","0005622 // intracellular // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005740 // mitochondrial envelope // not recorded /// 0005740 // mitochondrial envelope // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030176 // integral to endoplasmic reticulum membrane // not recorded /// 0030176 // integral to endoplasmic reticulum membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation","0003755 // peptidyl-prolyl cis-trans isomerase activity // not recorded /// 0003755 // peptidyl-prolyl cis-trans isomerase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005528 // FK506 binding // not recorded /// 0016853 // isomerase activity // inferred from electronic annotation","chr19:18642572-18652807 (-) // 83.5 // p13.11"]
["11745058_a_at",-0.030857086,-0.02759552,0.113544464,0.03635025,0.02759552,-0.075572014,0.9038589,0.72815645,1.0155346,0.02223945,1.0155346,"up","CDYL",9425.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007283 // spermatogenesis // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0016573 // histone acetylation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004402 // histone acetyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation","chr6:4706392-4955307 (+) // 97.46 // p25.1"]
["AFFX-M27830_3_at",0.014081001,0.055512905,-0.04228115,0.22370005,-0.014081001,-0.12528706,0.95687973,0.8673514,-1.0132614,-0.019006459,1.0132614,"down",0.22370005,-0.014081001,-0.12528706,0.014081001,0.055512905,-0.04228115]
["11715155_s_at",0.08112335,0.11282349,-0.011330128,-0.019075394,0.011329651,-0.036044598,0.504617,0.13036159,1.0537035,0.07546903,1.0537035,"up","TUBB7P /// TUBB8 /// TUBBP5","347688 /// 56604 /// 643224","0006184 // GTP catabolic process // inferred from electronic annotation /// 0007017 // microtubule-based process // inferred from electronic annotation /// 0007018 // microtubule-based movement // inferred from electronic annotation /// 0051258 // protein polymerization // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005198 // structural molecule activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation","chr16:90160430-90162597 (+) // 96.63 // q24.3 /// chr9:141069510-141071716 (+) // 93.18 // q34.3 /// chr10:92996-95178 (-) // 96.78 // p15.3 /// chr18:47389-49557 (-) // 94.68 // p11.32"]
["11750934_a_at",-0.09656191,0.04548073,-0.03700161,0.03700161,-0.34104204,0.103609085,0.93613476,0.80823624,1.0262979,0.037449595,1.0262979,"up","C9orf174 /// LOC100499484 /// LOC100499484-C9ORF174","100499483 /// 100499484 /// 57653","","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr9:100000764-100058282 (+) // 98.16 // q22.33"]
["11740917_at",0.11351085,-0.16032147,-0.102927685,0.0014605522,0.005762577,-0.0014603138,0.83269536,0.5679381,-1.0365816,-0.051833738,1.0365816,"down","WDFY3",23001.0,"","0005635 // nuclear envelope // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005776 // autophagic vacuole // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0019898 // extrinsic to membrane // inferred from direct assay /// 0044444 // cytoplasmic part // inferred from direct assay","0003831 // beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005545 // 1-phosphatidylinositol binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr4:85729984-85887503 (-) // 93.14 // q21.23"]
["11742296_x_at",1.835823E-5,0.07842541,-0.062717676,0.21579075,-0.032905817,-1.835823E-5,0.8295339,0.56121075,-1.039373,-0.05571354,1.039373,"down","POU1F1",5449.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","0001102 // RNA polymerase II activating transcription factor binding // inferred from physical interaction /// 0001105 // RNA polymerase II transcription coactivator activity // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr3:87308782-87325737 (-) // 99.93 // p11.2"]
["11720879_a_at",0.022249222,0.13396454,0.08823967,-0.022249222,-0.08795929,-0.032811165,0.29162204,0.027972572,1.093655,0.12915769,1.093655,"up","CABIN1",23523.0,"0007166 // cell surface receptor signaling pathway // non-traceable author statement /// 0016568 // chromatin modification // inferred from electronic annotation /// 0060548 // negative regulation of cell death // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0016235 // aggresome // inferred from direct assay","0004864 // protein phosphatase inhibitor activity // non-traceable author statement /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0030346 // protein phosphatase 2B binding // inferred from electronic annotation","chr22:24407911-24574596 (+) // 97.09 // q11.23"]
["11715326_s_at",0.08515787,0.004024029,-0.023369312,0.12318134,-0.05663824,-0.004024029,0.9959061,0.9868346,1.0007613,0.0010978633,1.0007613,"up","VSTM5",387804.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr11:93553734-93583668 (-) // 100.0 // q21"]
["11737998_a_at",-0.1260829,0.10352659,-0.060760975,0.12073183,0.04581499,-0.04581499,0.7775848,0.4614066,-1.0482744,-0.06801641,1.0482744,"down","LRRC3",81543.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr21:45875367-45878739 (+) // 73.93 // q22.3"]
["11763722_x_at",-0.08766031,8.9740753E-4,0.012308598,0.09537125,-0.012881756,-8.9740753E-4,0.6910628,0.326903,-1.0367122,-0.0520154,1.0367122,"down","SIRT6",51548.0,"0006471 // protein ADP-ribosylation // inferred from sequence or structural similarity /// 0006471 // protein ADP-ribosylation // traceable author statement /// 0006471 // protein ADP-ribosylation // inferred from electronic annotation /// 0006476 // protein deacetylation // inferred from electronic annotation /// 0010569 // regulation of double-strand break repair via homologous recombination // inferred from direct assay","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005724 // nuclear telomeric heterochromatin // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay","0003950 // NAD+ ADP-ribosyltransferase activity // traceable author statement /// 0003956 // NAD(P)+-protein-arginine ADP-ribosyltransferase activity // inferred from sequence or structural similarity /// 0003956 // NAD(P)+-protein-arginine ADP-ribosyltransferase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from sequence or structural similarity /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0017136 // NAD-dependent histone deacetylase activity // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046969 // NAD-dependent histone deacetylase activity (H3-K9 specific) // inferred from direct assay /// 0070403 // NAD+ binding // inferred from sequence or structural similarity /// 0070403 // NAD+ binding // inferred from electronic annotation","chr19:4174616-4182559 (-) // 96.03 // p13.3"]
["11762595_at",0.058732986,-0.058732986,0.23264074,-0.076090336,0.10039663,-0.09537125,0.73271084,0.3899336,1.0726916,0.1012353,1.0726916,"up","FBN2",2201.0,"0009653 // anatomical structure morphogenesis // traceable author statement /// 0030326 // embryonic limb morphogenesis // inferred from electronic annotation /// 0030501 // positive regulation of bone mineralization // inferred from sequence or structural similarity /// 0030501 // positive regulation of bone mineralization // inferred from electronic annotation /// 0035108 // limb morphogenesis // inferred from electronic annotation /// 0035583 // sequestering of TGFbeta in extracellular matrix // inferred from sequence or structural similarity /// 0035583 // sequestering of TGFbeta in extracellular matrix // inferred from electronic annotation /// 0045669 // positive regulation of osteoblast differentiation // inferred from sequence or structural similarity /// 0045669 // positive regulation of osteoblast differentiation // inferred from electronic annotation /// 0060346 // bone trabecula formation // inferred from sequence or structural similarity /// 0060346 // bone trabecula formation // inferred from electronic annotation","0001527 // microfibril // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // traceable author statement /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation","0005201 // extracellular matrix structural constituent // inferred from electronic annotation /// 0005201 // extracellular matrix structural constituent // traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation","chr5:127777694-127873916 (-) // 95.43 // q23.3"]
["11754127_a_at",0.00496006,-0.018907547,0.112122536,-0.00496006,-0.061084747,0.0755415,0.8601774,0.62866586,1.0207003,0.029559372,1.0207003,"up","BRMS1",25855.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0009987 // cellular process // inferred from electronic annotation /// 0019987 // negative regulation of anti-apoptosis // inferred from direct assay /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0090312 // positive regulation of protein deacetylation // inferred from direct assay /// 2000210 // positive regulation of anoikis // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0051059 // NF-kappaB binding // inferred from direct assay","chr11:66104978-66112283 (-) // 91.04 // q13.2"]
["11737871_a_at",-0.19439507,-0.09770703,0.057752132,0.04544878,0.021015644,-0.021015644,0.6604692,0.2868546,-1.0667826,-0.09326619,1.0667826,"down","TMEFF2",23671.0,"","0005576 // extracellular region // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","","chr2:192814748-193060435 (-) // 95.42 // q32.3"]
["11741548_a_at",0.104940414,0.13700867,-0.04903078,0.007091999,-0.1852603,-0.007091999,0.59558785,0.20968112,1.091309,0.12605959,1.091309,"up","MBNL1",4154.0,"0000381 // regulation of alternative nuclear mRNA splicing, via spliceosome // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from sequence or structural similarity /// 0006376 // mRNA splice site selection // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0007399 // nervous system development // inferred from sequence or structural similarity /// 0007519 // skeletal muscle tissue development // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from direct assay /// 0008380 // RNA splicing // inferred from electronic annotation /// 0030326 // embryonic limb morphogenesis // inferred from sequence or structural similarity /// 0043484 // regulation of RNA splicing // inferred from direct assay /// 0045445 // myoblast differentiation // inferred from sequence or structural similarity","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0010494 // cytoplasmic stress granule // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0003725 // double-stranded RNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:152016770-152183568 (+) // 98.0 // q25.1"]
["11731039_s_at",-0.085915565,-0.091547966,-0.16356277,0.08591604,0.12410641,0.17525291,0.12127802,0.0025412035,-1.1827134,-0.2421005,1.1827134,"down","IL15RA",3601.0,"0007165 // signal transduction // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0032825 // positive regulation of natural killer cell differentiation // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation","0004871 // signal transducer activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0004896 // cytokine receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr10:5994334-6020142 (-) // 97.0 // p15.1"]
["11718450_at",-0.0436821,0.008275986,-0.06311035,-0.008275986,0.04870701,0.03626442,0.45887408,0.10043595,-1.0413132,-0.058404017,1.0413132,"down","NAGA",4668.0,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009311 // oligosaccharide metabolic process // not recorded /// 0016052 // carbohydrate catabolic process // inferred from direct assay /// 0016139 // glycoside catabolic process // not recorded /// 0019377 // glycolipid catabolic process // inferred from mutant phenotype /// 0046477 // glycosylceramide catabolic process // not recorded","0005737 // cytoplasm // not recorded /// 0005764 // lysosome // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004553 // hydrolase activity, hydrolyzing O-glycosyl compounds // inferred from electronic annotation /// 0004557 // alpha-galactosidase activity // not recorded /// 0008456 // alpha-N-acetylgalactosaminidase activity // inferred from direct assay /// 0008456 // alpha-N-acetylgalactosaminidase activity // inferred from electronic annotation /// 0008456 // alpha-N-acetylgalactosaminidase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity, acting on glycosyl bonds // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0043169 // cation binding // inferred from electronic annotation","chr22:42454378-42466848 (-) // 95.75 // q13.2"]
["11730703_a_at",5.7792664E-4,0.2267499,-0.0296731,0.12399268,-0.019458532,-5.7792664E-4,0.91461587,0.75280136,1.021885,0.0312329,1.021885,"up","PDE4C",5143.0,"0006198 // cAMP catabolic process // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0046676 // negative regulation of insulin secretion // inferred from electronic annotation","0005829 // cytosol // traceable author statement /// 0005929 // cilium // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0072372 // primary cilium // inferred from electronic annotation /// 0072372 // primary cilium // inferred from sequence or structural similarity","0003824 // catalytic activity // inferred from electronic annotation /// 0004112 // cyclic-nucleotide phosphodiesterase activity // non-traceable author statement /// 0004114 // 3',5'-cyclic-nucleotide phosphodiesterase activity // non-traceable author statement /// 0004114 // 3',5'-cyclic-nucleotide phosphodiesterase activity // inferred from electronic annotation /// 0004115 // 3',5'-cyclic-AMP phosphodiesterase activity // inferred from electronic annotation /// 0004115 // 3',5'-cyclic-AMP phosphodiesterase activity // traceable author statement /// 0008081 // phosphoric diester hydrolase activity // inferred from electronic annotation /// 0008144 // drug binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:18318771-18344824 (-) // 76.49 // p13.11"]
["11753406_a_at",0.24276876,0.01923132,0.17284536,-0.07480717,-0.040607452,-0.01923132,0.35854292,0.049178757,1.1406296,0.18983044,1.1406296,"up","EPHB4",2050.0,"0001525 // angiogenesis // inferred from sequence or structural similarity /// 0001525 // angiogenesis // inferred from electronic annotation /// 0002042 // cell migration involved in sprouting angiogenesis // inferred from direct assay /// 0003007 // heart morphogenesis // inferred from sequence or structural similarity /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from direct assay /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0048013 // ephrin receptor signaling pathway // inferred from direct assay /// 0048013 // ephrin receptor signaling pathway // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from direct assay /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005003 // ephrin receptor activity // inferred from direct assay /// 0005003 // ephrin receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr7:100414866-100424652 (-) // 100.0 // q22.1"]
["11755166_a_at",-0.09592676,-0.07760382,0.012032986,0.036218166,-0.012032509,0.049869537,0.4744201,0.10952774,-1.0559325,-0.078517646,1.0559325,"down","ESAM",90952.0,"0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0016337 // cell-cell adhesion // inferred from electronic annotation /// 0050900 // leukocyte migration // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005912 // adherens junction // inferred from electronic annotation /// 0005923 // tight junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","","chr11:124623024-124627433 (-) // 83.1 // q24.2"]
["11724342_s_at",-0.0071253777,0.29179287,-0.0071253777,0.007125616,0.13509727,-0.10489082,0.8220813,0.5455356,1.0570693,0.08006996,1.0570693,"up","LGALS7 /// LGALS7B","3963 /// 653499","0006915 // apoptotic process // inferred from electronic annotation /// 0007157 // heterophilic cell-cell adhesion // traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0030246 // carbohydrate binding // inferred from electronic annotation /// 0030246 // carbohydrate binding // traceable author statement","chr19:39279921-39282388 (+) // 92.07 // q13.2 /// chr19:39261610-39264077 (-) // 91.95 // q13.2"]
["11734960_at",0.053997517,0.17016077,-0.0036563873,-0.077662945,0.0036563873,-0.011769772,0.528017,0.1470781,1.0733293,0.1020928,1.0733293,"up","TRHDE",29953.0,"0006508 // proteolysis // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement","0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004177 // aminopeptidase activity // inferred from electronic annotation /// 0004177 // aminopeptidase activity // traceable author statement /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:72666307-73059421 (+) // 97.56 // q21.1"]
["11745399_a_at",0.038375378,0.03457284,0.011695862,-0.011695862,-0.0225029,-0.17417955,0.5183196,0.13974878,1.070047,0.09767419,1.070047,"up","HPSE2",60495.0,"0005975 // carbohydrate metabolic process // inferred from electronic annotation","0005578 // proteinaceous extracellular matrix // inferred from direct assay /// 0005622 // intracellular // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity, acting on glycosyl bonds // inferred from electronic annotation /// 0030305 // heparanase activity // inferred from direct assay /// 0030305 // heparanase activity // traceable author statement /// 0043169 // cation binding // inferred from electronic annotation /// 0043395 // heparan sulfate proteoglycan binding // inferred from direct assay","chr10:100218876-100995619 (-) // 96.7 // q24.2"]
["11725906_a_at",-0.0650115,-0.118302345,-0.036509037,0.0365088,0.133847,0.116490126,0.20941453,0.011687776,-1.1241928,-0.16888952,1.1241928,"down","C9orf47",286223.0,"0001816 // cytokine production // inferred from electronic annotation /// 0003376 // sphingosine-1-phosphate signaling pathway // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from electronic annotation /// 0006954 // inflammatory response // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007193 // adenylate cyclase-inhibiting G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007204 // elevation of cytosolic calcium ion concentration // traceable author statement /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0032651 // regulation of interleukin-1 beta production // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement /// 0008289 // lipid binding // traceable author statement /// 0038036 // sphingosine-1-phosphate receptor activity // inferred from electronic annotation","chr9:91605777-91619924 (+) // 88.05 // q22.1"]
["11723011_s_at",0.015417099,0.06089878,0.052514076,-0.06265545,-0.015417099,-0.08644009,0.24655667,0.017647944,1.0701262,0.09778091,1.0701262,"up","CAPZA2",830.0,"0006461 // protein complex assembly // traceable author statement /// 0006928 // cellular component movement // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0051693 // actin filament capping // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0008290 // F-actin capping protein complex // inferred from electronic annotation /// 0008290 // F-actin capping protein complex // traceable author statement /// 0015629 // actin cytoskeleton // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030863 // cortical cytoskeleton // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation","chr7:116502526-116559399 (+) // 96.47 // q31.2"]
["11744891_at",0.0070562363,-0.0070562363,0.078564644,-0.08018875,-0.037186623,0.05493498,0.726984,0.38170668,1.0331156,0.047001727,1.0331156,"up","LOC339803",339803.0,"","","","chr2:61368324-61372110 (-) // 35.7 // p15"]
["11756616_a_at",-0.033103466,0.004411936,0.068023205,0.033010483,-0.048152924,-0.004411936,0.86109865,0.63008857,1.0136986,0.019628732,1.0136986,"up","CNNM1",26507.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr10:101119001-101151628 (+) // 96.58 // q24.2"]
["11728482_a_at",0.059410095,0.011443138,-0.028418541,0.045280457,-0.011443138,-0.052951813,0.8558372,0.619228,1.0143225,0.020516451,1.0143225,"up","ZNF181 /// ZNF302","339318 /// 55900","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:35225077-35233777 (+) // 95.13 // q13.11"]
["11726658_a_at",-0.07425499,0.0304389,-0.26527214,0.06504345,-0.0304389,0.0934701,0.58351547,0.19728723,-1.1062833,-0.14572088,1.1062833,"down","ADORA1",134.0,"0000186 // activation of MAPKK activity // inferred from electronic annotation /// 0001659 // temperature homeostasis // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001973 // adenosine receptor signaling pathway // inferred from electronic annotation /// 0002087 // regulation of respiratory gaseous exchange by neurological system process // inferred from electronic annotation /// 0002674 // negative regulation of acute inflammatory response // inferred from electronic annotation /// 0002686 // negative regulation of leukocyte migration // inferred from electronic annotation /// 0002793 // positive regulation of peptide secretion // inferred from electronic annotation /// 0003093 // regulation of glomerular filtration // inferred from electronic annotation /// 0006612 // protein targeting to membrane // inferred from electronic annotation /// 0006909 // phagocytosis // traceable author statement /// 0006954 // inflammatory response // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007193 // adenylate cyclase-inhibiting G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007267 // cell-cell signaling // traceable author statement /// 0007399 // nervous system development // traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0014050 // negative regulation of glutamate secretion // inferred from electronic annotation /// 0016042 // lipid catabolic process // inferred from electronic annotation /// 0032229 // negative regulation of synaptic transmission, GABAergic // inferred from electronic annotation /// 0032244 // positive regulation of nucleoside transport // inferred from electronic annotation /// 0032900 // negative regulation of neurotrophin production // inferred from electronic annotation /// 0035307 // positive regulation of protein dephosphorylation // inferred from electronic annotation /// 0035814 // negative regulation of renal sodium excretion // inferred from electronic annotation /// 0042323 // negative regulation of circadian sleep/wake cycle, non-REM sleep // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043268 // positive regulation of potassium ion transport // inferred from electronic annotation /// 0045741 // positive regulation of epidermal growth factor-activated receptor activity // inferred from electronic annotation /// 0045776 // negative regulation of blood pressure // inferred from electronic annotation /// 0045777 // positive regulation of blood pressure // inferred from electronic annotation /// 0045822 // negative regulation of heart contraction // inferred from electronic annotation /// 0045908 // negative regulation of vasodilation // inferred from electronic annotation /// 0046888 // negative regulation of hormone secretion // inferred from electronic annotation /// 0048167 // regulation of synaptic plasticity // inferred from electronic annotation /// 0050728 // negative regulation of inflammatory response // inferred from electronic annotation /// 0050890 // cognition // inferred from electronic annotation /// 0050965 // detection of temperature stimulus involved in sensory perception of pain // inferred from electronic annotation /// 0050995 // negative regulation of lipid catabolic process // inferred from electronic annotation /// 0051967 // negative regulation of synaptic transmission, glutamatergic // inferred from electronic annotation /// 0055117 // regulation of cardiac muscle contraction // inferred from electronic annotation /// 0055118 // negative regulation of cardiac muscle contraction // inferred from electronic annotation /// 0060079 // regulation of excitatory postsynaptic membrane potential // inferred from electronic annotation /// 0060087 // relaxation of vascular smooth muscle // inferred from electronic annotation /// 0070256 // negative regulation of mucus secretion // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0012505 // endomembrane system // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0030673 // axolemma // inferred from electronic annotation /// 0032279 // asymmetric synapse // inferred from electronic annotation /// 0042734 // presynaptic membrane // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043195 // terminal button // inferred from electronic annotation /// 0044297 // cell body // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation /// 0048786 // presynaptic active zone // inferred from electronic annotation","0001609 // G-protein coupled adenosine receptor activity // inferred from electronic annotation /// 0001664 // G-protein coupled receptor binding // inferred from electronic annotation /// 0001883 // purine nucleoside binding // inferred from electronic annotation /// 0004629 // phospholipase C activity // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0031683 // G-protein beta/gamma-subunit complex binding // inferred from electronic annotation /// 0032795 // heterotrimeric G-protein binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr1:203096832-203136533 (+) // 98.88 // q32.1"]
["11758174_s_at",0.056639194,-0.06351042,-0.24021244,0.0015678406,0.021686077,-0.0015678406,0.71307224,0.3589253,-1.0640677,-0.08958997,1.0640677,"down","FAM222B",55731.0,"","","","chr17:27084407-27085570 (-) // 99.77 // q11.2"]
["11725012_a_at",0.0024323463,-0.09613705,0.0,0.0,0.060628414,-0.017896175,0.687045,0.3214257,-1.0320258,-0.045479055,1.0320258,"down","KCNIP3",30818.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007610 // behavior // inferred from electronic annotation /// 0019233 // sensory perception of pain // inferred from electronic annotation /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0043523 // regulation of neuron apoptotic process // inferred from electronic annotation /// 0048265 // response to pain // inferred from electronic annotation /// 0071805 // potassium ion transmembrane transport // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0003714 // transcription corepressor activity // traceable author statement /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005267 // potassium channel activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005509 // calcium ion binding // traceable author statement /// 0008022 // protein C-terminus binding // inferred from electronic annotation /// 0048306 // calcium-dependent protein binding // inferred from electronic annotation","chr2:96012475-96051824 (+) // 96.08 // q11.1"]
["11735706_a_at",-0.0018901825,0.0018901825,-0.04275894,0.027849197,-0.029328346,0.06373024,0.68364733,0.3169732,-1.0245591,-0.035003264,1.0245591,"down","BSG",682.0,"0006090 // pyruvate metabolic process // traceable author statement /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0007566 // embryo implantation // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0042475 // odontogenesis of dentin-containing tooth // inferred from electronic annotation /// 0043434 // response to peptide hormone stimulus // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046689 // response to mercury ion // inferred from electronic annotation /// 0046697 // decidualization // inferred from electronic annotation /// 0050900 // leukocyte migration // traceable author statement /// 0051591 // response to cAMP // inferred from electronic annotation","0000139 // Golgi membrane // traceable author statement /// 0002080 // acrosomal membrane // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0042383 // sarcolemma // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0045121 // membrane raft // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0005537 // mannose binding // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr19:572536-583492 (+) // 97.27 // p13.3"]
["11761304_at",0.01976657,0.037169933,-0.04876852,0.021477222,-0.01976633,-0.031903744,0.89086986,0.69939,1.0089027,0.012787001,1.0089027,"up","CCK",885.0,"0001662 // behavioral fear response // inferred from electronic annotation /// 0001764 // neuron migration // inferred from sequence or structural similarity /// 0001764 // neuron migration // inferred from electronic annotation /// 0001836 // release of cytochrome c from mitochondria // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007205 // protein kinase C-activating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007409 // axonogenesis // inferred from sequence or structural similarity /// 0007409 // axonogenesis // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0032099 // negative regulation of appetite // inferred from electronic annotation /// 0032461 // positive regulation of protein oligomerization // inferred from electronic annotation /// 0042755 // eating behavior // inferred from sequence or structural similarity /// 0042755 // eating behavior // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0051901 // positive regulation of mitochondrial depolarization // inferred from electronic annotation /// 0051930 // regulation of sensory perception of pain // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0030424 // axon // inferred from sequence or structural similarity /// 0030424 // axon // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043194 // initial segment // inferred from electronic annotation /// 0043195 // terminal button // inferred from electronic annotation /// 0043203 // axon hillock // inferred from electronic annotation /// 0043204 // perikaryon // inferred from electronic annotation","0005179 // hormone activity // traceable author statement /// 0005179 // hormone activity // inferred from electronic annotation /// 0005184 // neuropeptide hormone activity // inferred from sequence or structural similarity /// 0005184 // neuropeptide hormone activity // inferred from electronic annotation","chr3:42304246-42306259 (-) // 97.63 // p22.1"]
["11716370_x_at",0.06584072,-0.02747488,-0.041262627,0.027475357,-0.11370659,0.03306055,0.9289719,0.7892003,1.0116835,0.016757969,1.0116835,"up","FAM89B",23625.0,"","","","chr11:65339819-65341661 (+) // 88.37 // q13.1"]
["11737204_x_at",0.039631844,-0.04448843,-0.17741346,0.1020937,0.01961708,-0.01961708,0.6407284,0.26199883,-1.0679084,-0.09478791,1.0679084,"down","MARCH8",220972.0,"0000209 // protein polyubiquitination // inferred from direct assay /// 0002495 // antigen processing and presentation of peptide antigen via MHC class II // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0045347 // negative regulation of MHC class II biosynthetic process // inferred from electronic annotation","0005764 // lysosome // inferred from direct assay /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from electronic annotation","0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0042289 // MHC class II protein binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr10:45952816-46090354 (-) // 92.14 // q11.21"]
["11734342_a_at",-0.064232826,0.015649319,0.07770443,0.004933834,-0.004933834,-0.08314848,0.7940075,0.49285012,1.0262791,0.03742312,1.0262791,"up","ZMYM1",79830.0,"","0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation","chr1:35544963-35581455 (+) // 89.42 // p34.3"]
["11748648_a_at",-1.9598007E-4,-0.11053038,-0.025366306,0.07688141,1.9598007E-4,0.082648754,0.4287477,0.08194898,-1.0707386,-0.09860625,1.0707386,"down","PTPRR",5801.0,"0001701 // in utero embryonic development // inferred from expression pattern /// 0006470 // protein dephosphorylation // traceable author statement /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // traceable author statement /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // traceable author statement /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005001 // transmembrane receptor protein tyrosine phosphatase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from sequence or structural similarity /// 0019901 // protein kinase binding // inferred from electronic annotation","chr12:71032025-71182762 (-) // 99.04 // q15"]
["11756779_x_at",0.020277023,-0.0026226044,0.016742706,0.0026216507,-0.06027794,-0.01674366,0.5220868,0.1426983,1.0254561,0.03626569,1.0254561,"up","JTB",10899.0,"0006915 // apoptotic process // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from mutant phenotype /// 0007067 // mitosis // inferred from electronic annotation /// 0033205 // cell cycle cytokinesis // inferred from mutant phenotype /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0045860 // positive regulation of protein kinase activity // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // inferred from direct assay /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030496 // midbody // inferred from direct assay","0019901 // protein kinase binding // inferred from direct assay","chr1:153946987-153950013 (-) // 96.61 // q21.3"]
["11716581_a_at",-0.0065174103,-0.061000824,-0.058034897,0.0065174103,0.021400452,0.010248184,0.33434916,0.04028588,-1.0385517,-0.054573018,1.0385517,"down","G3BP2",9908.0,"0006810 // transport // inferred from electronic annotation /// 0007253 // cytoplasmic sequestering of NF-kappaB // non-traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007265 // Ras protein signal transduction // non-traceable author statement /// 0051028 // mRNA transport // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // non-traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0030159 // receptor signaling complex scaffold activity // non-traceable author statement","chr4:76567766-76598776 (-) // 98.79 // q21.1"]
["11736141_a_at",-0.019428253,0.019428253,0.20747471,-0.033373833,0.069042206,-0.1146307,0.69916964,0.3386254,1.06842,0.09547896,1.06842,"up","ITSN1",6453.0,"0006897 // endocytosis // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0042327 // positive regulation of phosphorylation // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048488 // synaptic vesicle endocytosis // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement /// 0051897 // positive regulation of protein kinase B signaling cascade // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005905 // coated pit // inferred from direct assay /// 0005905 // coated pit // inferred from electronic annotation /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030139 // endocytic vesicle // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0005085 // guanyl-nucleotide exchange factor activity // non-traceable author statement /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005509 // calcium ion binding // non-traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0019209 // kinase activator activity // inferred from electronic annotation /// 0032947 // protein complex scaffold // inferred from direct assay /// 0070064 // proline-rich region binding // inferred from physical interaction","chr21:35014756-35263396 (+) // 98.43 // q22.11"]
["11735123_x_at",0.10854578,0.08329916,0.13409138,-0.08329916,-0.18419886,-0.12068415,0.11231145,0.0019360465,1.1793889,0.2380395,1.1793889,"up","POLR1E",64425.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0009303 // rRNA transcription // inferred from sequence or structural similarity","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from sequence or structural similarity /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0030054 // cell junction // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003899 // DNA-directed RNA polymerase activity // inferred from electronic annotation","chr9:37485934-37503693 (+) // 82.14 // p13.2"]
["11740022_a_at",-0.16760015,-0.17327976,0.06382847,-0.03049326,0.051357746,0.03049326,0.6327437,0.252188,-1.0788317,-0.10946978,1.0788317,"down","LRRCC1",85444.0,"0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005814 // centriole // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation","","chr8:86019376-86058315 (+) // 96.78 // q21.2"]
["11742814_s_at",-0.0304389,0.0304389,-0.11223936,0.064860106,0.12931848,-0.06183529,0.67608875,0.30719984,-1.0581378,-0.08152749,1.0581378,"down","SEMA6A",57556.0,"0001764 // neuron migration // inferred from electronic annotation /// 0006915 // apoptotic process // non-traceable author statement /// 0007010 // cytoskeleton organization // non-traceable author statement /// 0007166 // cell surface receptor signaling pathway // non-traceable author statement /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // non-traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0007411 // axon guidance // non-traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007411 // axon guidance // inferred from electronic annotation /// 0009887 // organ morphogenesis // non-traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0051642 // centrosome localization // inferred from electronic annotation /// 0071526 // semaphorin-plexin signaling pathway // inferred from electronic annotation /// 2001224 // positive regulation of neuron migration // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030424 // axon // non-traceable author statement","0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0030215 // semaphorin receptor binding // inferred from electronic annotation","chr5:115779250-115910709 (-) // 96.44 // q23.1"]
["11748315_s_at",-0.0041332245,0.0041332245,0.09381199,-0.0066690445,0.017244339,-0.047711372,0.6705622,0.29951644,1.0307177,0.043649293,1.0307177,"up","PRNP",5621.0,"0001933 // negative regulation of protein phosphorylation // inferred from sequence or structural similarity /// 0001933 // negative regulation of protein phosphorylation // inferred from electronic annotation /// 0006878 // cellular copper ion homeostasis // non-traceable author statement /// 0006916 // anti-apoptosis // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from sequence or structural similarity /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0008152 // metabolic process // traceable author statement /// 0032689 // negative regulation of interferon-gamma production // inferred from sequence or structural similarity /// 0032689 // negative regulation of interferon-gamma production // inferred from electronic annotation /// 0032700 // negative regulation of interleukin-17 production // inferred from sequence or structural similarity /// 0032700 // negative regulation of interleukin-17 production // inferred from electronic annotation /// 0032703 // negative regulation of interleukin-2 production // inferred from sequence or structural similarity /// 0032703 // negative regulation of interleukin-2 production // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // inferred from sequence or structural similarity /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0046007 // negative regulation of activated T cell proliferation // inferred from sequence or structural similarity /// 0046007 // negative regulation of activated T cell proliferation // inferred from electronic annotation /// 0046686 // response to cadmium ion // inferred from electronic annotation /// 0046688 // response to copper ion // inferred from electronic annotation /// 0050860 // negative regulation of T cell receptor signaling pathway // inferred from sequence or structural similarity /// 0050860 // negative regulation of T cell receptor signaling pathway // inferred from electronic annotation /// 0051260 // protein homooligomerization // inferred from electronic annotation /// 0070885 // negative regulation of calcineurin-NFAT signaling cascade // inferred from sequence or structural similarity /// 0070885 // negative regulation of calcineurin-NFAT signaling cascade // inferred from electronic annotation","0005624 // membrane fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from sequence or structural similarity /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0019898 // extrinsic to membrane // traceable author statement /// 0031225 // anchored to membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0045121 // membrane raft // inferred from sequence or structural similarity /// 0045121 // membrane raft // inferred from electronic annotation","0005507 // copper ion binding // inferred from direct assay /// 0005507 // copper ion binding // traceable author statement /// 0005507 // copper ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // inferred from direct assay /// 0015631 // tubulin binding // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction /// 0043008 // ATP-dependent protein binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051087 // chaperone binding // inferred from electronic annotation","chr20:4679854-4681091 (+) // 94.93 // p13"]
["11749684_a_at",0.0127186775,0.001054287,-0.001054287,0.09369421,-0.010309696,-0.060696602,0.98402,0.9454727,-1.002306,-0.0033230025,1.002306,"down","INTS9",55756.0,"0016180 // snRNA processing // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0032039 // integrator complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr8:28625274-28747451 (-) // 97.11 // p21.1"]
["11729303_a_at",-0.07662439,0.08894491,-0.08687544,-0.012852192,0.014495373,0.012852192,0.86288065,0.63382715,-1.0207881,-0.029683378,1.0207881,"down","UBE3B",89910.0,"0006464 // cellular protein modification process // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0042787 // protein ubiquitination involved in ubiquitin-dependent protein catabolic process // not recorded","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // not recorded /// 0005737 // cytoplasm // not recorded","0004842 // ubiquitin-protein ligase activity // not recorded /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation","chr12:109915206-109974507 (+) // 99.52 // q24.11"]
["11715735_a_at",-0.005101204,-0.01454258,0.048707962,-0.021948814,0.005101204,0.011719704,0.8631251,0.6351586,1.0079314,0.011397383,1.0079314,"up","TMEM123",114908.0,"0070267 // oncosis // inferred from direct assay","0009897 // external side of plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // non-traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation","chr11:102267062-102323775 (-) // 92.1 // q22.2"]
["11721835_s_at",-0.007393837,0.007393837,0.08604145,-0.02670002,0.019335747,-0.04662037,0.63283175,0.2527668,1.032882,0.04667541,1.032882,"up","TMEM14B",81853.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr6:10747994-10757213 (+) // 96.23 // p24.2"]
["11747123_a_at",0.059070587,-0.039093256,-0.04593563,0.32756162,0.026273012,-0.02627325,0.71641314,0.3646825,-1.085109,-0.11783996,1.085109,"down","COCH",1690.0,"0007605 // sensory perception of sound // inferred from electronic annotation /// 0007605 // sensory perception of sound // traceable author statement /// 0008360 // regulation of cell shape // inferred from mutant phenotype","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr14:31343777-31364260 (+) // 97.08 // q12"]
["11737053_s_at",-0.033129692,0.025327682,0.12872982,-0.025328636,0.1251564,-0.04716015,0.9209821,0.76756495,1.0158964,0.022753341,1.0158964,"up","HSPD1",3329.0,"0002368 // B cell cytokine production // inferred from direct assay /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // inferred from direct assay /// 0002842 // positive regulation of T cell mediated immune response to tumor cell // inferred from direct assay /// 0006200 // ATP catabolic process // inferred from sequence or structural similarity /// 0006457 // protein folding // inferred from electronic annotation /// 0006458 // 'de novo' protein folding // inferred from sequence or structural similarity /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0006950 // response to stress // inferred from electronic annotation /// 0006986 // response to unfolded protein // inferred from direct assay /// 0008219 // cell death // inferred from electronic annotation /// 0032727 // positive regulation of interferon-alpha production // inferred from direct assay /// 0032727 // positive regulation of interferon-alpha production // inferred from electronic annotation /// 0032729 // positive regulation of interferon-gamma production // inferred from direct assay /// 0032729 // positive regulation of interferon-gamma production // inferred from sequence or structural similarity /// 0032729 // positive regulation of interferon-gamma production // inferred from electronic annotation /// 0032733 // positive regulation of interleukin-10 production // inferred from direct assay /// 0032735 // positive regulation of interleukin-12 production // inferred from direct assay /// 0032755 // positive regulation of interleukin-6 production // inferred from direct assay /// 0042026 // protein refolding // inferred from direct assay /// 0042026 // protein refolding // inferred from electronic annotation /// 0042100 // B cell proliferation // inferred from direct assay /// 0042110 // T cell activation // inferred from direct assay /// 0042110 // T cell activation // inferred from electronic annotation /// 0042113 // B cell activation // inferred from direct assay /// 0043032 // positive regulation of macrophage activation // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0044267 // cellular protein metabolic process // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0048291 // isotype switching to IgG isotypes // inferred from direct assay /// 0050821 // protein stabilization // inferred from mutant phenotype /// 0050821 // protein stabilization // inferred from sequence or structural similarity /// 0050870 // positive regulation of T cell activation // inferred from direct assay /// 0050870 // positive regulation of T cell activation // inferred from sequence or structural similarity /// 0050870 // positive regulation of T cell activation // inferred from electronic annotation /// 0051131 // chaperone-mediated protein complex assembly // inferred from sequence or structural similarity /// 0051604 // protein maturation // inferred from sequence or structural similarity","0005615 // extracellular space // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from sequence or structural similarity /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement /// 0005759 // mitochondrial matrix // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005905 // coated pit // inferred from direct assay /// 0009986 // cell surface // inferred from direct assay /// 0019907 // cyclin-dependent protein kinase activating kinase holoenzyme complex // inferred from direct assay /// 0030135 // coated vesicle // inferred from direct assay /// 0030141 // secretory granule // inferred from sequence or structural similarity /// 0030141 // secretory granule // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation /// 0044459 // plasma membrane part // inferred from electronic annotation /// 0046696 // lipopolysaccharide receptor complex // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0001530 // lipopolysaccharide binding // inferred from direct assay /// 0001530 // lipopolysaccharide binding // inferred from electronic annotation /// 0002039 // p53 binding // inferred from physical interaction /// 0003688 // DNA replication origin binding // inferred from sequence or structural similarity /// 0003697 // single-stranded DNA binding // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from sequence or structural similarity /// 0043498 // cell surface binding // inferred from direct assay /// 0051082 // unfolded protein binding // inferred by curator /// 0051082 // unfolded protein binding // inferred from sequence or structural similarity /// 0051087 // chaperone binding // inferred from physical interaction","chr2:198351309-198365013 (-) // 94.53 // q33.1"]
["11740882_at",-0.045604706,-0.014164925,0.014164925,-0.06549692,0.16341686,0.18050575,0.63446003,0.25405374,-1.0777407,-0.10801007,1.0777407,"down","PRSS38",339501.0,"0006508 // proteolysis // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr1:228003345-228034169 (+) // 98.8 // q42.13"]
["11741731_a_at",-0.04812336,-0.054647923,0.022872448,-0.007748604,0.0077490807,0.039177895,0.61915135,0.23481834,-1.0278946,-0.03969236,1.0278946,"down","FBXO34",55030.0,"","","","chr14:55738871-55820304 (+) // 92.46 // q22.3"]
["11718164_at",0.047263145,0.041413307,0.014093399,-0.12321091,-0.014093399,-0.13194847,0.3137977,0.034246787,1.0897578,0.12400753,1.0897578,"up","PPP1R15B",84919.0,"0006417 // regulation of translation // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0006983 // ER overload response // inferred from electronic annotation /// 0042542 // response to hydrogen peroxide // inferred from electronic annotation","0000164 // protein phosphatase type 1 complex // inferred from electronic annotation","0004722 // protein serine/threonine phosphatase activity // inferred from electronic annotation","chr1:204372502-204380944 (-) // 93.77 // q32.1"]
["11720136_s_at",-0.023461342,-0.14283562,0.027425766,-0.075056076,0.027209282,0.023461342,0.83033514,0.562777,-1.0268048,-0.038161952,1.0268048,"down","ATP13A3",79572.0,"0006200 // ATP catabolic process // inferred from electronic annotation /// 0006812 // cation transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0015662 // ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016820 // hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:194123400-194188968 (-) // 98.9 // q29"]
["11756192_a_at",0.026352406,-0.17631555,-0.034168005,0.05100298,-0.026352167,0.045915604,0.6406645,0.26188153,-1.0606136,-0.084899195,1.0606136,"down","CLASP2",23122.0,"0000087 // M phase of mitotic cell cycle // traceable author statement /// 0000236 // mitotic prometaphase // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0007020 // microtubule nucleation // inferred from mutant phenotype /// 0007026 // negative regulation of microtubule depolymerization // non-traceable author statement /// 0007026 // negative regulation of microtubule depolymerization // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0007163 // establishment or maintenance of cell polarity // traceable author statement /// 0007163 // establishment or maintenance of cell polarity // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0016477 // cell migration // inferred from electronic annotation /// 0031023 // microtubule organizing center organization // inferred from mutant phenotype /// 0031110 // regulation of microtubule polymerization or depolymerization // inferred from mutant phenotype /// 0032886 // regulation of microtubule-based process // inferred from mutant phenotype /// 0034453 // microtubule anchoring // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005828 // kinetochore microtubule // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0005874 // microtubule // inferred from electronic annotation /// 0005881 // cytoplasmic microtubule // inferred from direct assay /// 0005881 // cytoplasmic microtubule // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005938 // cell cortex // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from direct assay /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // inferred from electronic annotation /// 0008107 // galactoside 2-alpha-L-fucosyltransferase activity // non-traceable author statement /// 0051010 // microtubule plus-end binding // inferred from direct assay","chr3:33537736-33546943 (-) // 58.6 // p22.3"]
["11734364_at",-0.2510736,0.09339404,0.016909838,0.051504135,-0.016910076,-0.24591804,0.9586884,0.8727897,1.0164351,0.023518167,1.0164351,"up","RFX3",5991.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007368 // determination of left/right symmetry // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0031018 // endocrine pancreas development // inferred from sequence or structural similarity /// 0031018 // endocrine pancreas development // inferred from electronic annotation /// 0042384 // cilium assembly // inferred from sequence or structural similarity /// 0042384 // cilium assembly // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048469 // cell maturation // inferred from sequence or structural similarity /// 0048469 // cell maturation // inferred from electronic annotation /// 0050796 // regulation of insulin secretion // inferred from sequence or structural similarity /// 0050796 // regulation of insulin secretion // inferred from electronic annotation /// 0060285 // ciliary cell motility // inferred from sequence or structural similarity /// 0060285 // ciliary cell motility // inferred from electronic annotation /// 0060287 // epithelial cilium movement involved in determination of left/right asymmetry // inferred from sequence or structural similarity /// 0060287 // epithelial cilium movement involved in determination of left/right asymmetry // inferred from electronic annotation /// 0072560 // type B pancreatic cell maturation // inferred from electronic annotation /// 2000078 // positive regulation of type B pancreatic cell development // inferred from sequence or structural similarity /// 2000078 // positive regulation of type B pancreatic cell development // inferred from electronic annotation","0000790 // nuclear chromatin // inferred from direct assay /// 0000790 // nuclear chromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005667 // transcription factor complex // inferred by curator","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from electronic annotation","chr9:3247036-3525983 (-) // 87.59 // p24.2"]
["11732117_s_at",0.11231136,0.027719498,0.064294815,-0.027719498,-0.1444025,-0.14949322,0.25722972,0.01988785,1.1292099,0.17531365,1.1292099,"up","KAT7",11143.0,"0006260 // DNA replication // inferred from direct assay /// 0006260 // DNA replication // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0016573 // histone acetylation // inferred from electronic annotation /// 0043966 // histone H3 acetylation // inferred from direct assay /// 0043981 // histone H4-K5 acetylation // inferred from direct assay /// 0043982 // histone H4-K8 acetylation // inferred from direct assay /// 0043983 // histone H4-K12 acetylation // inferred from direct assay /// 0043984 // histone H4-K16 acetylation // inferred from direct assay","0000123 // histone acetyltransferase complex // inferred from direct assay /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay","0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0004402 // histone acetyltransferase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0016747 // transferase activity, transferring acyl groups other than amino-acyl groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:47865916-47906456 (+) // 98.51 // q21.33"]
["11745731_x_at",0.024449348,-0.012355328,0.012354851,-0.121880054,-0.044430733,0.04411459,0.7238299,0.3763564,1.0344627,0.048881613,1.0344627,"up","TNIP1",10318.0,"0002755 // MyD88-dependent toll-like receptor signaling pathway // inferred from sequence or structural similarity /// 0006412 // translation // traceable author statement /// 0006952 // defense response // traceable author statement /// 0006954 // inflammatory response // inferred from electronic annotation /// 0007159 // leukocyte cell-cell adhesion // inferred from mutant phenotype /// 0009101 // glycoprotein biosynthetic process // inferred from direct assay /// 0043124 // negative regulation of I-kappaB kinase/NF-kappaB cascade // inferred from direct assay /// 0045071 // negative regulation of viral genome replication // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0050729 // positive regulation of inflammatory response // inferred from sequence or structural similarity /// 0070373 // negative regulation of ERK1 and ERK2 cascade // inferred from direct assay /// 0085032 // modulation by symbiont of host I-kappaB kinase/NF-kappaB cascade // inferred from direct assay","0005622 // intracellular // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0004843 // ubiquitin-specific protease activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0051019 // mitogen-activated protein kinase binding // inferred from direct assay","chr5:150410141-150460635 (-) // 99.73 // q33.1"]
["11738419_a_at",-0.010582447,-0.06851792,0.33136487,0.009129524,0.14940476,-0.009129524,0.9372029,0.811274,1.0240504,0.034286655,1.0240504,"up","ANGPT4",51378.0,"0001525 // angiogenesis // inferred from electronic annotation /// 0001935 // endothelial cell proliferation // inferred from direct assay /// 0006916 // anti-apoptosis // inferred from direct assay /// 0007165 // signal transduction // inferred from electronic annotation /// 0007171 // activation of transmembrane receptor protein tyrosine kinase activity // inferred from direct assay /// 0007596 // blood coagulation // traceable author statement /// 0010595 // positive regulation of endothelial cell migration // inferred from direct assay /// 0016525 // negative regulation of angiogenesis // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043536 // positive regulation of blood vessel endothelial cell migration // inferred from direct assay /// 0043537 // negative regulation of blood vessel endothelial cell migration // inferred from direct assay /// 0045766 // positive regulation of angiogenesis // inferred from direct assay /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0050900 // leukocyte migration // traceable author statement /// 0071456 // cellular response to hypoxia // inferred from expression pattern","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation","0005102 // receptor binding // inferred from electronic annotation /// 0030297 // transmembrane receptor protein tyrosine kinase activator activity // inferred from direct assay /// 0030971 // receptor tyrosine kinase binding // inferred from direct assay","chr20:853298-896977 (-) // 98.17 // p13"]
["11734653_x_at",0.055018425,0.024906158,0.048514366,-0.038319588,-0.024906158,-0.028897285,0.11050196,0.0018058044,1.0522815,0.0735207,1.0522815,"up","ATP5F1",515.0,"0006200 // ATP catabolic process // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0015986 // ATP synthesis coupled proton transport // not recorded /// 0015986 // ATP synthesis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0042776 // mitochondrial ATP synthesis coupled proton transport // inferred by curator /// 0042776 // mitochondrial ATP synthesis coupled proton transport // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046034 // ATP metabolic process // inferred from electronic annotation","0000276 // mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) // not recorded /// 0000276 // mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) // inferred from electronic annotation /// 0005739 // mitochondrion // inferred by curator /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005753 // mitochondrial proton-transporting ATP synthase complex // inferred from direct assay /// 0005759 // mitochondrial matrix // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0045263 // proton-transporting ATP synthase complex, coupling factor F(o) // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0015078 // hydrogen ion transmembrane transporter activity // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from direct assay /// 0022857 // transmembrane transporter activity // inferred by curator /// 0046933 // hydrogen ion transporting ATP synthase activity, rotational mechanism // not recorded","chr1:111991486-112004523 (+) // 40.64 // p13.2"]
["11717779_at",-0.012975216,7.081032E-4,-7.081032E-4,0.08653402,-0.004764557,0.034615517,0.56833464,0.18281747,-1.0303397,-0.043120094,1.0303397,"down","DHX35",60625.0,"0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation","0005681 // spliceosomal complex // inferred from electronic annotation /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr20:37597416-37668366 (+) // 93.74 // q11.23"]
["11728517_x_at",0.093577385,-0.018393517,0.17655277,0.008257866,-0.09205246,-0.008257866,0.53165656,0.15005212,1.0826721,0.1145964,1.0826721,"up","NSUN5P1",155400.0,"","","","chr7:75039604-75046066 (+) // 88.16 // q11.23 /// chr7:72418836-72425302 (-) // 87.09 // q11.23"]
["11740361_s_at",-0.005159855,-0.08151865,0.06051016,0.005159855,-0.17345333,0.088139534,0.9498637,0.8469479,1.0125514,0.017995182,1.0125514,"up","FOXN3",1112.0,"0000077 // DNA damage checkpoint // traceable author statement /// 0000085 // G2 phase of mitotic cell cycle // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007389 // pattern specification process // not recorded /// 0009790 // embryo development // not recorded /// 0009888 // tissue development // not recorded /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // not recorded","0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // not recorded","0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // not recorded /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // not recorded /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0008134 // transcription factor binding // not recorded /// 0008301 // DNA binding, bending // not recorded /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr14:89622516-90085456 (-) // 95.94 // q31.3"]
["11747942_a_at",0.07265687,0.05234933,-0.26881218,-0.26414895,0.0043754578,-0.0043754578,0.92960817,0.79070395,1.0281953,0.04011427,1.0281953,"up","ZEB2",9839.0,"0001755 // neural crest cell migration // inferred from electronic annotation /// 0001756 // somitogenesis // inferred from electronic annotation /// 0001843 // neural tube closure // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007399 // nervous system development // non-traceable author statement /// 0007417 // central nervous system development // inferred from electronic annotation /// 0021766 // hippocampus development // inferred from electronic annotation /// 0021846 // cell proliferation in forebrain // inferred from electronic annotation /// 0030177 // positive regulation of Wnt receptor signaling pathway // inferred from electronic annotation /// 0043507 // positive regulation of JUN kinase activity // inferred from electronic annotation /// 0048598 // embryonic morphogenesis // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0019208 // phosphatase regulator activity // non-traceable author statement /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046332 // SMAD binding // non-traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:145146779-145277686 (-) // 98.9 // q22.3"]
["11734980_a_at",0.09046888,0.04053688,-0.04053688,-0.042177677,-0.11457062,0.04512024,0.68818945,0.32368848,1.0478016,0.06736559,1.0478016,"up","RALY",22913.0,"0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0030530 // heterogeneous nuclear ribonucleoprotein complex // traceable author statement /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement","chr20:32581558-32668065 (+) // 92.09 // q11.22"]
["11758107_x_at",0.0072603226,-0.0072603226,-0.008018494,0.033813477,-0.0388031,0.0370636,0.85881436,0.6247468,-1.0093063,-0.01336408,1.0093063,"down","PCBP1",5093.0,"0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016071 // mRNA metabolic process // non-traceable author statement","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003697 // single-stranded DNA binding // inferred from direct assay /// 0003723 // RNA binding // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr2:70314604-70316309 (+) // 89.81 // p13.3"]
["11746642_s_at",0.080904245,0.10124993,-0.2977419,0.015942812,-0.015942812,-0.11875987,0.9980961,0.99416703,1.0007331,0.0010573057,1.0007331,"up","GRM5",2915.0,"0000185 // activation of MAPKKK activity // inferred from electronic annotation /// 0002029 // desensitization of G-protein coupled receptor protein signaling pathway // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007205 // protein kinase C-activating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007206 // phospholipase C-activating G-protein coupled glutamate receptor signaling pathway // traceable author statement /// 0007268 // synaptic transmission // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007612 // learning // inferred from electronic annotation /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0040013 // negative regulation of locomotion // inferred from electronic annotation /// 0048169 // regulation of long-term neuronal synaptic plasticity // inferred from electronic annotation /// 0048170 // positive regulation of long-term neuronal synaptic plasticity // inferred from electronic annotation","0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from electronic annotation /// 0043198 // dendritic shaft // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement /// 0008066 // glutamate receptor activity // traceable author statement /// 0031687 // A2A adenosine receptor binding // inferred from electronic annotation","chr11:88240700-88781040 (-) // 97.71 // q14.2"]
["11716835_a_at",-0.041264534,0.03247547,0.24361849,0.05780363,-0.07486296,-0.03247595,0.7201493,0.36987928,1.0679086,0.09478823,1.0679086,"up","DHRS3",9249.0,"0007601 // visual perception // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0042572 // retinol metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000166 // nucleotide binding // traceable author statement /// 0009055 // electron carrier activity // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0052650 // NADP-retinol dehydrogenase activity // inferred from electronic annotation","chr1:12627938-12678367 (-) // 93.51 // p36.22"]
["11749714_a_at",0.1341176,0.019857407,-0.019857883,-0.10545874,0.09379864,-0.058024883,0.7528552,0.42063564,1.0482146,0.06793404,1.0482146,"up","GGA3",23163.0,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // non-traceable author statement /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation","0005622 // intracellular // non-traceable author statement /// 0005622 // intracellular // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from direct assay /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030131 // clathrin adaptor complex // inferred from electronic annotation /// 0044431 // Golgi apparatus part // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0030306 // ADP-ribosylation factor binding // inferred from direct assay","chr17:73233378-73258442 (-) // 99.96 // q25.1"]
["11747589_a_at",0.09326172,-0.015794754,0.051361084,-0.015647888,-0.017062187,0.015647888,0.6064768,0.22032568,1.0342823,0.048630048,1.0342823,"up","GOT2",2806.0,"0005975 // carbohydrate metabolic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006094 // gluconeogenesis // traceable author statement /// 0006103 // 2-oxoglutarate metabolic process // inferred from sequence or structural similarity /// 0006107 // oxaloacetate metabolic process // inferred from electronic annotation /// 0006520 // cellular amino acid metabolic process // inferred from electronic annotation /// 0006531 // aspartate metabolic process // inferred from sequence or structural similarity /// 0006532 // aspartate biosynthetic process // inferred from electronic annotation /// 0006533 // aspartate catabolic process // inferred from direct assay /// 0006536 // glutamate metabolic process // inferred from sequence or structural similarity /// 0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // inferred from electronic annotation /// 0008652 // cellular amino acid biosynthetic process // traceable author statement /// 0009058 // biosynthetic process // inferred from electronic annotation /// 0015908 // fatty acid transport // inferred from expression pattern /// 0019550 // glutamate catabolic process to aspartate // inferred from electronic annotation /// 0019551 // glutamate catabolic process to 2-oxoglutarate // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045471 // response to ethanol // inferred from direct assay","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement /// 0005759 // mitochondrial matrix // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004069 // L-aspartate:2-oxoglutarate aminotransferase activity // not recorded /// 0004069 // L-aspartate:2-oxoglutarate aminotransferase activity // inferred from direct assay /// 0004069 // L-aspartate:2-oxoglutarate aminotransferase activity // inferred from sequence or structural similarity /// 0004069 // L-aspartate:2-oxoglutarate aminotransferase activity // inferred from electronic annotation /// 0008483 // transaminase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation /// 0080130 // L-phenylalanine:2-oxoglutarate aminotransferase activity // inferred from electronic annotation","chr16:58741721-58768230 (-) // 99.75 // q21"]
["11722624_a_at",0.18000937,0.06929636,-0.099190235,-0.18999147,0.014183521,-0.014183521,0.6961846,0.3339772,1.0817513,0.11336891,1.0817513,"up","CNOT3",4849.0,"0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0000289 // nuclear-transcribed mRNA poly(A) tail shortening // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement","0000932 // cytoplasmic mRNA processing body // inferred from sequence or structural similarity /// 0000932 // cytoplasmic mRNA processing body // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0005515 // protein binding // inferred from physical interaction","chr19:54641404-54659445 (+) // 97.03 // q13.42"]
["11725035_s_at",0.006911278,-0.032292366,-0.08609104,0.008337975,0.01846981,-0.006911278,0.5780844,0.19222666,-1.030818,-0.043789614,1.030818,"down","LMBRD1",55788.0,"0006810 // transport // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation","0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0031419 // cobalamin binding // inferred from electronic annotation","chr6:70385698-70507049 (-) // 97.21 // q13"]
["11751113_a_at",-0.07021475,-0.04502344,-0.06930065,0.04502344,0.09046841,0.13681507,0.15969925,0.005373421,-1.1113259,-0.1522819,1.1113259,"down","SNX11",29916.0,"0006810 // transport // inferred from electronic annotation /// 0007154 // cell communication // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation","0008289 // lipid binding // inferred from electronic annotation /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation","chr17:46184910-46199497 (+) // 99.81 // q21.32"]
["11754797_a_at",0.047967434,-0.061738968,-0.024765491,0.024765491,0.045567513,-0.084248066,0.9614459,0.8812528,-1.0057051,-0.008207356,1.0057051,"down","CHUK",1147.0,"0002011 // morphogenesis of an epithelial sheet // inferred from electronic annotation /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0006954 // inflammatory response // traceable author statement /// 0006955 // immune response // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007249 // I-kappaB kinase/NF-kappaB cascade // traceable author statement /// 0007252 // I-kappaB phosphorylation // traceable author statement /// 0007252 // I-kappaB phosphorylation // inferred from electronic annotation /// 0007595 // lactation // inferred from electronic annotation /// 0008063 // Toll signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0009615 // response to virus // traceable author statement /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030316 // osteoclast differentiation // inferred from electronic annotation /// 0032481 // positive regulation of type I interferon production // traceable author statement /// 0033598 // mammary gland epithelial cell proliferation // inferred from electronic annotation /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0042475 // odontogenesis of dentin-containing tooth // inferred from electronic annotation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0051092 // positive regulation of NF-kappaB transcription factor activity // traceable author statement /// 0060749 // mammary gland alveolus development // inferred from electronic annotation /// 0070423 // nucleotide-binding oligomerization domain containing signaling pathway // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0008385 // IkappaB kinase complex // traceable author statement /// 0009898 // internal side of plasma membrane // inferred from sequence or structural similarity /// 0035631 // CD40 receptor complex // inferred from sequence or structural similarity /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008384 // IkappaB kinase activity // traceable author statement /// 0008384 // IkappaB kinase activity // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr10:101948055-101989321 (-) // 81.0 // q24.31"]
["11733028_s_at",-0.001572609,0.001572609,0.045778275,0.012214661,-0.084010124,-0.04716587,0.54419637,0.1605652,1.0387967,0.054913286,1.0387967,"up","AIDA",64853.0,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0009953 // dorsal/ventral pattern formation // inferred from sequence or structural similarity /// 0043496 // regulation of protein homodimerization activity // inferred from sequence or structural similarity /// 0043496 // regulation of protein homodimerization activity // inferred from electronic annotation /// 0043508 // negative regulation of JUN kinase activity // inferred from direct assay /// 0043508 // negative regulation of JUN kinase activity // inferred from electronic annotation /// 0046329 // negative regulation of JNK cascade // inferred from sequence or structural similarity /// 0046329 // negative regulation of JNK cascade // inferred from electronic annotation","0044444 // cytoplasmic part // inferred from electronic annotation","0019904 // protein domain specific binding // inferred from electronic annotation","chr1:222841356-222885864 (-) // 95.98 // q41"]
["11715471_a_at",-0.043805122,-0.090195656,-0.004520893,0.00452137,0.12483072,0.062645435,0.38794157,0.061153974,-1.0793577,-0.11017311,1.0793577,"down","SRPR",6734.0,"0006184 // GTP catabolic process // inferred from electronic annotation /// 0006412 // translation // traceable author statement /// 0006613 // cotranslational protein targeting to membrane // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005783 // endoplasmic reticulum // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005785 // signal recognition particle receptor complex // inferred from electronic annotation /// 0005785 // signal recognition particle receptor complex // traceable author statement /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005047 // signal recognition particle binding // inferred from electronic annotation /// 0005047 // signal recognition particle binding // traceable author statement /// 0005525 // GTP binding // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation","chr11:126132832-126138854 (-) // 95.99 // q24.2"]
["11763299_a_at",0.1497922,-0.001683712,-0.15174913,0.10375118,0.001683712,-0.12398434,0.9896222,0.9658687,1.0034506,0.0049696406,1.0034506,"up","UBE3B",89910.0,"0006464 // cellular protein modification process // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0042787 // protein ubiquitination involved in ubiquitin-dependent protein catabolic process // not recorded","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // not recorded /// 0005737 // cytoplasm // not recorded","0004842 // ubiquitin-protein ligase activity // not recorded /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation","chr12:109967788-109972876 (+) // 96.4 // q24.11"]
["11751540_a_at",0.17431927,0.09516573,0.10505581,-0.09516573,-0.13288784,-0.167727,0.10107897,0.0013951712,1.1948038,0.25677377,1.1948038,"up","CYBASC3",220002.0,"0006810 // transport // inferred from electronic annotation /// 0022900 // electron transport chain // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031902 // late endosome membrane // inferred from electronic annotation","0016491 // oxidoreductase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:61117312-61129321 (-) // 82.89 // q12.2"]
["11762544_at",0.060566425,0.08686018,-0.28605175,-0.13139772,0.12717342,-0.060566425,0.9582424,0.8715263,-1.0172057,-0.024611473,1.0172057,"down","DNAJC24",120526.0,"0006457 // protein folding // inferred from electronic annotation","","0031072 // heat shock protein binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // inferred from electronic annotation","chr11:31391403-31449511 (+) // 91.07 // p13"]
["11755810_s_at",0.09832001,-0.17960882,-0.2576146,0.02692318,-0.02692318,0.056116104,0.6713521,0.30011848,-1.0955635,-0.13167314,1.0955635,"down","TAPT1",202018.0,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0048706 // embryonic skeletal system development // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0016520 // growth hormone-releasing hormone receptor activity // traceable author statement","chr4:16162918-16228094 (-) // 96.16 // p15.32"]
["11727041_a_at",0.022715092,-0.14174223,0.0423913,-0.18930769,0.12570763,-0.022715092,0.9933213,0.9776198,1.0022389,0.0032263957,1.0022389,"up","TTI2",80185.0,"","","","chr8:33356232-33371119 (-) // 94.94 // p12"]
["11741505_s_at",0.07073212,-0.059394836,0.059395313,-0.07315302,0.1331191,-0.06705189,0.9178742,0.76063055,1.0181425,0.025939442,1.0181425,"up","NREP",9315.0,"0017015 // regulation of transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0031103 // axon regeneration // inferred from electronic annotation /// 0045664 // regulation of neuron differentiation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","","chr5:111064999-111312628 (-) // 99.91 // q22.1"]
["11747022_a_at",0.030514479,0.116036415,-0.10801363,-0.095080376,0.20041609,-0.03051424,0.9745019,0.9184328,-1.0084187,-0.012094747,1.0084187,"down","ATP13A4",84239.0,"0006200 // ATP catabolic process // inferred from electronic annotation /// 0006754 // ATP biosynthetic process // inferred from electronic annotation /// 0006812 // cation transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0015662 // ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016820 // hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:193157903-193272696 (-) // 94.36 // q29"]
["11753874_x_at",-0.034066677,0.0175004,0.087772846,-0.08633375,0.068374634,-0.0175004,0.8320595,0.5666059,1.0249513,0.035555415,1.0249513,"up","BCL2L15",440603.0,"0006915 // apoptotic process // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation","","chr1:114424542-114429997 (-) // 99.51 // p13.2"]
["11723230_a_at",-0.13055801,0.16675138,0.16170311,-0.15324259,-0.038281918,0.038281918,0.71274745,0.3585704,1.0845122,0.11704633,1.0845122,"up","RNF138",51444.0,"0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr18:29671843-29711523 (+) // 95.8 // q12.1"]
["11739628_a_at",-0.054436684,0.08969593,0.21167278,-0.13026094,0.054436207,-0.065831184,0.6234553,0.24045767,1.0939367,0.12952924,1.0939367,"up","CSF1",1435.0,"0001503 // ossification // inferred from electronic annotation /// 0001954 // positive regulation of cell-matrix adhesion // inferred from sequence or structural similarity /// 0001954 // positive regulation of cell-matrix adhesion // inferred from electronic annotation /// 0003006 // developmental process involved in reproduction // inferred from sequence or structural similarity /// 0003006 // developmental process involved in reproduction // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from electronic annotation /// 0008283 // cell proliferation // non-traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0010628 // positive regulation of gene expression // inferred from direct assay /// 0010743 // regulation of macrophage derived foam cell differentiation // non-traceable author statement /// 0010744 // positive regulation of macrophage derived foam cell differentiation // inferred from direct assay /// 0030097 // hemopoiesis // non-traceable author statement /// 0030154 // cell differentiation // non-traceable author statement /// 0030225 // macrophage differentiation // traceable author statement /// 0030225 // macrophage differentiation // inferred from electronic annotation /// 0030278 // regulation of ossification // inferred from electronic annotation /// 0030316 // osteoclast differentiation // inferred from direct assay /// 0030335 // positive regulation of cell migration // inferred from sequence or structural similarity /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0032270 // positive regulation of cellular protein metabolic process // inferred from direct assay /// 0032946 // positive regulation of mononuclear cell proliferation // inferred from direct assay /// 0040018 // positive regulation of multicellular organism growth // inferred from electronic annotation /// 0042117 // monocyte activation // non-traceable author statement /// 0042476 // odontogenesis // inferred from electronic annotation /// 0042488 // positive regulation of odontogenesis of dentin-containing tooth // inferred from electronic annotation /// 0045087 // innate immune response // inferred from electronic annotation /// 0045651 // positive regulation of macrophage differentiation // inferred from direct assay /// 0045651 // positive regulation of macrophage differentiation // inferred from electronic annotation /// 0045657 // positive regulation of monocyte differentiation // inferred from sequence or structural similarity /// 0045657 // positive regulation of monocyte differentiation // inferred from electronic annotation /// 0045672 // positive regulation of osteoclast differentiation // inferred from direct assay /// 0045672 // positive regulation of osteoclast differentiation // inferred from electronic annotation /// 0045860 // positive regulation of protein kinase activity // inferred from sequence or structural similarity /// 0045860 // positive regulation of protein kinase activity // inferred from electronic annotation /// 0046579 // positive regulation of Ras protein signal transduction // inferred from electronic annotation /// 0048873 // homeostasis of number of cells within a tissue // inferred from electronic annotation /// 0060444 // branching involved in mammary gland duct morphogenesis // inferred from electronic annotation /// 0060611 // mammary gland fat development // inferred from electronic annotation /// 0060763 // mammary duct terminal end bud growth // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0043235 // receptor complex // inferred from sequence or structural similarity /// 0043235 // receptor complex // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0005125 // cytokine activity // inferred from direct assay /// 0005125 // cytokine activity // inferred from electronic annotation /// 0005157 // macrophage colony-stimulating factor receptor binding // inferred from sequence or structural similarity /// 0005157 // macrophage colony-stimulating factor receptor binding // traceable author statement /// 0005157 // macrophage colony-stimulating factor receptor binding // inferred from electronic annotation /// 0008083 // growth factor activity // inferred from direct assay /// 0008083 // growth factor activity // non-traceable author statement /// 0008083 // growth factor activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from electronic annotation","chr1:110453232-110472656 (+) // 96.98 // p13.3"]
["11741188_a_at",0.004661083,0.013848305,-0.004661083,-0.19785547,-0.20895004,0.14885187,0.7906138,0.4839755,1.0648134,0.090600595,1.0648134,"up","SLC30A6",55676.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // inferred from electronic annotation /// 0006829 // zinc ion transport // inferred from electronic annotation /// 0006895 // Golgi to endosome transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0071577 // zinc ion transmembrane transport // inferred from electronic annotation","0000139 // Golgi membrane // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005385 // zinc ion transmembrane transporter activity // inferred from electronic annotation /// 0008324 // cation transmembrane transporter activity // inferred from electronic annotation","chr2:32390916-32446809 (+) // 85.78 // p22.3"]
["11745010_a_at",-0.0058431625,0.06733084,0.0058431625,0.15140009,-0.036821365,-0.04583645,0.9981676,0.99482495,-1.0003262,-4.704678E-4,1.0003262,"down","DCBLD2",131566.0,"0007155 // cell adhesion // inferred from electronic annotation /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0030522 // intracellular receptor mediated signaling pathway // non-traceable author statement /// 0042060 // wound healing // inferred from direct assay","0005887 // integral to plasma membrane // inferred from direct assay /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr3:98516626-98620034 (-) // 97.36 // q12.1"]
["11734608_x_at",0.005195141,-0.0051956177,0.052529335,-0.06741619,-0.011816025,0.05543995,0.827414,0.55664104,1.0177903,0.02544037,1.0177903,"up","SHQ1",55164.0,"0022618 // ribonucleoprotein complex assembly // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 2000233 // negative regulation of rRNA processing // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0015030 // Cajal body // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr3:72798427-72897599 (-) // 73.2 // p13"]
["11752538_a_at",0.0069527626,0.12777781,0.057343245,-0.14487767,-0.0069527626,-0.09996581,0.36302203,0.05093726,1.1079991,0.14795668,1.1079991,"up","GABRG1",2565.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006821 // chloride transport // inferred from electronic annotation /// 0007214 // gamma-aminobutyric acid signaling pathway // inferred from electronic annotation /// 0007268 // synaptic transmission // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0034707 // chloride channel complex // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004890 // GABA-A receptor activity // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005230 // extracellular ligand-gated ion channel activity // inferred from electronic annotation /// 0005254 // chloride channel activity // inferred from electronic annotation","chr4:46042610-46126082 (-) // 94.54 // p12"]
["11753319_a_at",-0.042102814,-0.0066313744,-0.34510517,0.15537024,0.03929758,0.0066313744,0.547191,0.16380835,-1.1474088,-0.19837955,1.1474088,"down","KCNMB3",27094.0,"0001508 // regulation of action potential // inferred from direct assay /// 0005513 // detection of calcium ion // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006813 // potassium ion transport // inferred from direct assay /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0019228 // regulation of action potential in neuron // inferred from direct assay","0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0008076 // voltage-gated potassium channel complex // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0015269 // calcium-activated potassium channel activity // inferred from direct assay /// 0015269 // calcium-activated potassium channel activity // inferred from electronic annotation /// 0015459 // potassium channel regulator activity // non-traceable author statement /// 0015459 // potassium channel regulator activity // traceable author statement","chr3:178957593-178984790 (-) // 99.9 // q26.32"]
["11736833_a_at",-0.030015469,0.20524979,-0.16982985,0.19964409,0.030015469,-0.037779808,0.87398106,0.65808237,-1.0440266,-0.062158488,1.0440266,"down","ZNF619",285267.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:40518603-40530069 (+) // 97.06 // p22.1"]
["11748543_a_at",-0.16943073,-0.16013145,-0.093678474,0.22218418,0.093678474,0.15356922,0.121009454,0.0025208772,-1.2290618,-0.2975575,1.2290618,"down","TXNIP",10628.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006606 // protein import into nucleus // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0009749 // response to glucose stimulus // inferred from electronic annotation /// 0030216 // keratinocyte differentiation // inferred from direct assay /// 0032355 // response to estradiol stimulus // inferred from electronic annotation /// 0032570 // response to progesterone stimulus // inferred from electronic annotation /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042542 // response to hydrogen peroxide // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043086 // negative regulation of catalytic activity // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from electronic annotation /// 0051592 // response to calcium ion // inferred from electronic annotation /// 0051782 // negative regulation of cell division // inferred from direct assay /// 0071228 // cellular response to tumor cell // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005758 // mitochondrial intermembrane space // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0004857 // enzyme inhibitor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction","chr1:145439346-145441230 (+) // 100.0 // q21.1"]
["11737251_at",0.0010540485,-0.017956972,0.31756258,0.06327343,-0.029902697,-0.0010540485,0.78264254,0.47012037,1.0639628,0.08944773,1.0639628,"up","CD226",10666.0,"0001816 // cytokine production // inferred from electronic annotation /// 0002860 // positive regulation of natural killer cell mediated cytotoxicity directed against tumor cell target // inferred from mutant phenotype /// 0002891 // positive regulation of immunoglobulin mediated immune response // inferred from direct assay /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0008037 // cell recognition // traceable author statement /// 0033005 // positive regulation of mast cell activation // inferred from direct assay /// 0045954 // positive regulation of natural killer cell mediated cytotoxicity // inferred from mutant phenotype /// 0050776 // regulation of immune response // traceable author statement /// 0060369 // positive regulation of Fc receptor mediated stimulatory signaling pathway // inferred from direct assay","0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0045121 // membrane raft // traceable author statement","0004872 // receptor activity // inferred from electronic annotation /// 0005178 // integrin binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from physical interaction /// 0050839 // cell adhesion molecule binding // inferred from physical interaction","chr18:67530194-67624232 (-) // 89.61 // q22.2"]
["11749891_a_at",-0.009821892,0.009821892,-0.14668131,0.019178867,-0.07977629,0.11165905,0.7552098,0.42348012,-1.0467482,-0.065914385,1.0467482,"down","HLF",3131.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0007275 // multicellular organismal development // traceable author statement /// 0048511 // rhythmic process // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation","chr17:53343170-53398775 (+) // 94.51 // q22"]
["11737020_x_at",0.014405727,0.22243643,-0.10830641,-0.014405727,-0.018634796,0.038607597,0.89031523,0.69801456,1.0288192,0.040989477,1.0288192,"up","AGAP2",116986.0,"0001934 // positive regulation of protein phosphorylation // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0032312 // regulation of ARF GTPase activity // inferred from electronic annotation /// 0033601 // positive regulation of mammary gland epithelial cell proliferation // inferred from electronic annotation /// 0042177 // negative regulation of protein catabolic process // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from genetic interaction /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0045860 // positive regulation of protein kinase activity // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046427 // positive regulation of JAK-STAT cascade // inferred from electronic annotation /// 0060749 // mammary gland alveolus development // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0008060 // ARF GTPase activator activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0030295 // protein kinase activator activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:58118980-58135984 (-) // 96.98 // q14.1"]
["11746001_x_at",-0.05071783,0.050717592,0.21487951,-0.3101282,0.17021275,-0.08111715,0.7472909,0.41205174,1.1059636,0.14530389,1.1059636,"up","ZNF252P",286101.0,"","0005622 // intracellular // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation","chr8:146198974-146225155 (-) // 86.83 // q24.3"]
["11762275_x_at",-0.09657478,-0.122074604,-0.018360138,0.12099028,0.018360138,0.1391697,0.277645,0.02452556,-1.1264968,-0.1718432,1.1264968,"down","UQCRB",7381.0,"0006119 // oxidative phosphorylation // traceable author statement /// 0006122 // mitochondrial electron transport, ubiquinol to cytochrome c // inferred from electronic annotation /// 0009060 // aerobic respiration // traceable author statement /// 0022900 // electron transport chain // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // traceable author statement","0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005746 // mitochondrial respiratory chain // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0070469 // respiratory chain // inferred from electronic annotation","0008121 // ubiquinol-cytochrome-c reductase activity // inferred from electronic annotation","chr8:97242942-97247774 (-) // 96.64 // q22.1"]
["11730701_at",-0.035012722,0.041894913,-0.021093369,0.14354086,-0.021093369,0.021093369,0.7332778,0.3912133,-1.0371208,-0.05258397,1.0371208,"down","C11orf49",79096.0,"","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay","","chr11:46958250-47185932 (+) // 98.78 // p11.2"]
["11743503_a_at",0.12690449,0.04066658,0.024490356,-0.080703735,-0.09393597,-0.024490356,0.28743804,0.027066328,1.094595,0.13039711,1.094595,"up","GTF3C2",2976.0,"0006351 // transcription, DNA-dependent // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006383 // transcription from RNA polymerase III promoter // inferred from direct assay /// 0006383 // transcription from RNA polymerase III promoter // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0042791 // 5S class rRNA transcription from RNA polymerase III type 1 promoter // inferred by curator /// 0042797 // tRNA transcription from RNA polymerase III promoter // inferred by curator","0000127 // transcription factor TFIIIC complex // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0003677 // DNA binding // inferred from direct assay","chr2:27548521-27579896 (-) // 93.44 // p23.3"]
["11758812_at",0.019876957,0.32230806,-0.034118652,-0.045702934,-0.0029044151,0.0029044151,0.7080773,0.3516557,1.0851716,0.11792317,1.0851716,"up","SHFM1",7979.0,"0000724 // double-strand break repair via homologous recombination // inferred from electronic annotation /// 0006508 // proteolysis // inferred from direct assay /// 0006508 // proteolysis // inferred from sequence or structural similarity","0000502 // proteasome complex // inferred from direct assay /// 0000502 // proteasome complex // inferred from electronic annotation /// 0000502 // proteasome complex // inferred from sequence or structural similarity /// 0032039 // integrator complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from direct assay /// 0008233 // peptidase activity // inferred from sequence or structural similarity","chr7:96317911-96339202 (-) // 74.7 // q21.3"]
["11742940_s_at",-0.02585411,-0.011061668,0.006038666,0.020097733,-2.975464E-4,2.975464E-4,0.5961833,0.21014996,-1.0118474,-0.016991695,1.0118474,"down","UBE2D3",7323.0,"0000209 // protein polyubiquitination // inferred from direct assay /// 0006281 // DNA repair // inferred from electronic annotation /// 0006464 // cellular protein modification process // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006513 // protein monoubiquitination // inferred from direct assay /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0016567 // protein ubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0030509 // BMP signaling pathway // traceable author statement /// 0032480 // negative regulation of type I interferon production // traceable author statement /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0070936 // protein K48-linked ubiquitination // inferred from direct assay /// 0070979 // protein K11-linked ubiquitination // inferred from direct assay","0005654 // nucleoplasm // traceable author statement /// 0005768 // endosome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0004842 // ubiquitin-protein ligase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation","chr4:103717132-103749105 (-) // 85.58 // q24"]
["11763702_a_at",0.007840633,-0.007840633,0.18500757,0.08996582,-0.14184141,-0.13218069,0.65184444,0.2766601,1.0890131,0.123021305,1.0890131,"up","WDR48",57599.0,"0016579 // protein deubiquitination // inferred from direct assay /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr3:39131058-39138155 (+) // 75.9 // p22.2"]
["11739178_a_at",-0.05282879,0.059275627,-0.080411434,0.007384777,0.09113407,-0.007384777,0.709599,0.354401,-1.0388827,-0.055032812,1.0388827,"down","ISM2",145501.0,"","0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay","","chr14:77940736-77965687 (-) // 89.18 // q24.3"]
["11740300_x_at",-0.0025258064,0.0025258064,-0.15117168,-0.057394505,0.036200523,0.06644964,0.7101972,0.355292,-1.04643,-0.06547579,1.04643,"down","MARCH2",51257.0,"0006897 // endocytosis // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation","0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from direct assay","0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:8478181-8503897 (+) // 87.77 // p13.2"]
["11746150_s_at",0.01350975,-0.01350975,-0.06305313,0.04737091,-0.11362696,0.11366749,0.8621149,0.6319209,-1.0258512,-0.03682155,1.0258512,"down","AGAP9 /// BMS1 /// BMS1P1 /// BMS1P2 /// BMS1P4 /// BMS1P5 /// BMS1P6","399761 /// 414216 /// 642517 /// 642826 /// 728053 /// 729096 /// 9790","0006184 // GTP catabolic process // inferred from electronic annotation /// 0032312 // regulation of ARF GTPase activity // inferred from electronic annotation /// 0042254 // ribosome biogenesis // inferred from electronic annotation /// 0042255 // ribosome assembly // inferred from sequence or structural similarity /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from sequence or structural similarity /// 0005730 // nucleolus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0008060 // ARF GTPase activator activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr10:75461120-75490263 (-) // 77.69 // q22.2"]
["11761672_at",0.1437707,-0.053931236,-0.38903713,0.047524452,-0.047524452,0.060642242,0.7940075,0.49309492,-1.0866947,-0.1199467,1.0866947,"down","SLC16A5",9121.0,"0006810 // transport // inferred from electronic annotation /// 0015711 // organic anion transport // inferred from electronic annotation /// 0015718 // monocarboxylic acid transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008028 // monocarboxylic acid transmembrane transporter activity // traceable author statement /// 0015293 // symporter activity // inferred from electronic annotation /// 0015355 // secondary active monocarboxylate transmembrane transporter activity // inferred from electronic annotation","chr17:73089381-73100505 (+) // 96.42 // q25.1"]
["11733259_s_at",0.01764679,0.019636631,0.113787174,-0.03658724,-0.097278595,-0.01764679,0.39486134,0.064321704,1.0724133,0.10086105,1.0724133,"up","TAOK3",51347.0,"0000165 // MAPK cascade // inferred from mutant phenotype /// 0006281 // DNA repair // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from mutant phenotype /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006469 // negative regulation of protein kinase activity // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from direct assay /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0031572 // G2/M transition DNA damage checkpoint // inferred from mutant phenotype /// 0032874 // positive regulation of stress-activated MAPK cascade // inferred from mutant phenotype /// 0043507 // positive regulation of JUN kinase activity // inferred from mutant phenotype /// 0046329 // negative regulation of JNK cascade // inferred from direct assay /// 0046330 // positive regulation of JNK cascade // inferred from mutant phenotype /// 0046777 // protein autophosphorylation // inferred from direct assay","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004860 // protein kinase inhibitor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr12:118587605-118810750 (-) // 95.99 // q24.23"]
["11762103_a_at",-0.16918612,0.064022064,-0.12180853,0.064022064,-0.064021826,0.08501744,0.66169435,0.28854728,-1.0747467,-0.10399672,1.0747467,"down","ZNF274",10782.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016032 // viral reproduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005730 // nucleolus // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003714 // transcription corepressor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:58694475-58722075 (+) // 81.93 // q13.43"]
["11752248_a_at",0.041595936,0.010574341,-0.0025820732,-0.03881502,0.0025820732,-0.11843252,0.5267349,0.14642571,1.0483239,0.06808449,1.0483239,"up","MET",4233.0,"0000187 // activation of MAPK activity // inferred from electronic annotation /// 0001101 // response to acid // inferred from electronic annotation /// 0001764 // neuron migration // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0001890 // placenta development // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007166 // cell surface receptor signaling pathway // non-traceable author statement /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007420 // brain development // inferred from electronic annotation /// 0007517 // muscle organ development // inferred from electronic annotation /// 0007519 // skeletal muscle tissue development // inferred from electronic annotation /// 0007569 // cell aging // inferred from electronic annotation /// 0007595 // lactation // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0008584 // male gonad development // inferred from electronic annotation /// 0009611 // response to wounding // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0010800 // positive regulation of peptidyl-threonine phosphorylation // inferred from electronic annotation /// 0010801 // negative regulation of peptidyl-threonine phosphorylation // inferred from electronic annotation /// 0010828 // positive regulation of glucose transport // inferred from electronic annotation /// 0010976 // positive regulation of neuron projection development // inferred from electronic annotation /// 0014003 // oligodendrocyte development // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0014812 // muscle cell migration // inferred from electronic annotation /// 0014902 // myotube differentiation // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0021953 // central nervous system neuron differentiation // inferred from electronic annotation /// 0030317 // sperm motility // inferred from electronic annotation /// 0030534 // adult behavior // inferred from electronic annotation /// 0031016 // pancreas development // inferred from electronic annotation /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042593 // glucose homeostasis // inferred from electronic annotation /// 0043434 // response to peptide hormone stimulus // inferred from electronic annotation /// 0045740 // positive regulation of DNA replication // inferred from electronic annotation /// 0045840 // positive regulation of mitosis // inferred from electronic annotation /// 0046777 // protein autophosphorylation // inferred from electronic annotation /// 0048012 // hepatocyte growth factor receptor signaling pathway // traceable author statement /// 0048012 // hepatocyte growth factor receptor signaling pathway // inferred from electronic annotation /// 0048754 // branching morphogenesis of a tube // inferred from mutant phenotype /// 0050775 // positive regulation of dendrite morphogenesis // inferred from electronic annotation /// 0051450 // myoblast proliferation // inferred from electronic annotation /// 0060665 // regulation of branching involved in salivary gland morphogenesis by mesenchymal-epithelial signaling // inferred from electronic annotation /// 0071241 // cellular response to inorganic substance // inferred from electronic annotation /// 0071243 // cellular response to arsenic-containing substance // inferred from electronic annotation /// 0071333 // cellular response to glucose stimulus // inferred from electronic annotation /// 0071354 // cellular response to interleukin-6 // inferred from electronic annotation /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation /// 0071375 // cellular response to peptide hormone stimulus // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0009925 // basal plasma membrane // inferred from direct assay /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0019861 // flagellum // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation /// 0060076 // excitatory synapse // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // non-traceable author statement /// 0004713 // protein tyrosine kinase activity // traceable author statement /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005008 // hepatocyte growth factor-activated receptor activity // traceable author statement /// 0005008 // hepatocyte growth factor-activated receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008013 // beta-catenin binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0032403 // protein complex binding // inferred from electronic annotation /// 0043274 // phospholipase binding // inferred from electronic annotation /// 0043548 // phosphatidylinositol 3-kinase binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr7:116339138-116399652 (+) // 99.92 // q31.2"]
["11728807_at",-0.066009045,-0.024867058,-0.09417963,0.0650363,0.024866581,0.1453476,0.28526193,0.026311435,-1.1019831,-0.14010206,1.1019831,"down","SIRT5",23408.0,"0006342 // chromatin silencing // traceable author statement /// 0006471 // protein ADP-ribosylation // traceable author statement /// 0006476 // protein deacetylation // inferred from direct assay /// 0036047 // peptidyl-lysine demalonylation // inferred from direct assay /// 0036047 // peptidyl-lysine demalonylation // inferred from electronic annotation /// 0036049 // peptidyl-lysine desuccinylation // inferred from direct assay /// 0036049 // peptidyl-lysine desuccinylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005758 // mitochondrial intermembrane space // inferred from direct assay /// 0005758 // mitochondrial intermembrane space // inferred from electronic annotation /// 0005759 // mitochondrial matrix // inferred from direct assay /// 0005759 // mitochondrial matrix // inferred from electronic annotation","0003950 // NAD+ ADP-ribosyltransferase activity // traceable author statement /// 0008270 // zinc ion binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0036054 // protein-malonyllysine demalonylase activity // inferred from direct assay /// 0036054 // protein-malonyllysine demalonylase activity // inferred from electronic annotation /// 0036055 // protein-succinyllysine desuccinylase activity // inferred from direct assay /// 0036055 // protein-succinyllysine desuccinylase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070403 // NAD+ binding // inferred from direct assay /// 0070403 // NAD+ binding // inferred from electronic annotation","chr6:13579032-13605971 (+) // 89.3 // p23"]
["11718039_at",0.027638912,0.017983913,0.067706585,-0.19503164,-0.0655942,-0.017983913,0.4192204,0.07653044,1.0947841,0.13064644,1.0947841,"up","DCAF12",25853.0,"0016567 // protein ubiquitination // inferred by curator /// 0016567 // protein ubiquitination // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0080008 // CUL4-RING ubiquitin ligase complex // inferred from direct assay","","chr9:34086384-34126771 (-) // 94.9 // p13.3"]
["11761827_x_at",-0.06830883,0.15970373,-0.18547535,-0.1238513,0.30392933,0.06830883,0.8062668,0.51475716,-1.0823416,-0.11415584,1.0823416,"down","C21orf58",54058.0,"","","","chr21:47734784-47743783 (-) // 79.81 // q22.3"]
["11731317_a_at",-0.08668232,-0.078873634,-0.12733603,0.11337519,0.078873634,0.097444534,0.07587968,4.2131532E-4,-1.1440856,-0.19419505,1.1440856,"down","MMP28",79148.0,"0006508 // proteolysis // non-traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // non-traceable author statement /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from electronic annotation","0004222 // metalloendopeptidase activity // traceable author statement /// 0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:34105508-34122640 (-) // 95.83 // q12"]
["11735529_s_at",0.05911541,0.019864082,-0.1155467,-0.10673475,0.02508545,-0.019864082,0.9164156,0.757752,1.015119,0.021648798,1.015119,"up","KLK14",43847.0,"0006508 // proteolysis // inferred from direct assay /// 0006508 // proteolysis // inferred from electronic annotation /// 0009566 // fertilization // inferred from direct assay /// 0045744 // negative regulation of G-protein coupled receptor protein signaling pathway // inferred from direct assay /// 0045745 // positive regulation of G-protein coupled receptor protein signaling pathway // inferred from direct assay /// 0048730 // epidermis morphogenesis // inferred from direct assay /// 0070684 // seminal clot liquefaction // inferred from direct assay","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from direct assay /// 0004252 // serine-type endopeptidase activity // non-traceable author statement /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr19:51581153-51587502 (-) // 92.32 // q13.41"]
["11722238_a_at",-0.011975288,-0.1346283,-0.06987858,0.011975288,0.08028793,0.14703941,0.34689286,0.04483377,-1.1110535,-0.15192825,1.1110535,"down","DPM3",54344.0,"0005975 // carbohydrate metabolic process // non-traceable author statement /// 0006488 // dolichol-linked oligosaccharide biosynthetic process // traceable author statement /// 0006501 // C-terminal protein lipidation // traceable author statement /// 0006506 // GPI anchor biosynthetic process // inferred from direct assay /// 0006506 // GPI anchor biosynthetic process // traceable author statement /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0018406 // protein C-linked glycosylation via 2'-alpha-mannosyl-L-tryptophan // traceable author statement /// 0031647 // regulation of protein stability // inferred from physical interaction /// 0035268 // protein mannosylation // traceable author statement /// 0035269 // protein O-linked mannosylation // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030176 // integral to endoplasmic reticulum membrane // inferred from direct assay /// 0031501 // mannosyltransferase complex // traceable author statement /// 0033185 // dolichol-phosphate-mannose synthase complex // inferred from direct assay","0004582 // dolichyl-phosphate beta-D-mannosyltransferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation","chr1:155112366-155113071 (-) // 74.87 // q22"]
["11752302_a_at",-0.100461006,-0.09044886,-0.07545805,0.19734144,0.07545805,0.11477804,0.14381768,0.004006244,-1.1631054,-0.2179818,1.1631054,"down","LAMB3",3914.0,"0007155 // cell adhesion // inferred from electronic annotation /// 0008544 // epidermis development // traceable author statement /// 0031581 // hemidesmosome assembly // traceable author statement /// 0034329 // cell junction assembly // traceable author statement /// 0050873 // brown fat cell differentiation // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005604 // basement membrane // inferred from electronic annotation /// 0005610 // laminin-5 complex // inferred from electronic annotation","0005198 // structural molecule activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0032403 // protein complex binding // inferred from electronic annotation","chr1:209790922-209825770 (-) // 99.91 // q32.2"]
["11732974_at",0.00986433,-0.30422306,0.13594341,0.0,-0.010939121,0.0,0.9029996,0.7263667,-1.0346614,-0.04915873,1.0346614,"down","OR1D2",4991.0,"0000060 // protein import into nucleus, translocation // inferred from mutant phenotype /// 0006928 // cellular component movement // traceable author statement /// 0006935 // chemotaxis // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from direct assay /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007338 // single fertilization // inferred from electronic annotation /// 0007608 // sensory perception of smell // traceable author statement /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from direct assay /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement /// 0004984 // olfactory receptor activity // inferred from direct assay /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr17:2995351-2996290 (-) // 97.41 // p13.3"]
["11717565_s_at",0.019166946,0.037031174,0.0021619797,-0.022916794,-0.0021619797,-0.13244724,0.54314613,0.15910074,1.0511452,0.07196196,1.0511452,"up","EMP1",2012.0,"0007275 // multicellular organismal development // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0008544 // epidermis development // traceable author statement /// 0016049 // cell growth // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","","chr12:13349448-13371604 (+) // 93.18 // p13.1"]
["11754820_a_at",0.052998543,-0.06767416,0.094129086,-0.10644817,-0.03985071,0.03985071,0.73301226,0.39034757,1.0438882,0.061967224,1.0438882,"up","RLTPR",146206.0,"","","","chr16:67681771-67687115 (+) // 93.38 // q22.1"]
["11716241_x_at",0.040576935,0.04079151,-0.032509804,-0.005214691,0.005214691,-0.027051926,0.73175555,0.3885943,1.0176938,0.025303494,1.0176938,"up","RAB6A",5870.0,"0000042 // protein targeting to Golgi // inferred from direct assay /// 0006184 // GTP catabolic process // inferred from direct assay /// 0006184 // GTP catabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006890 // retrograde vesicle-mediated transport, Golgi to ER // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0018125 // peptidyl-cysteine methylation // inferred from direct assay /// 0034067 // protein localization in Golgi apparatus // inferred from direct assay /// 0072385 // minus-end-directed organelle transport along microtubule // traceable author statement","0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from direct assay /// 0003924 // GTPase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from direct assay /// 0005525 // GTP binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from physical interaction","chr11:73386684-73472185 (-) // 96.38 // q13.4"]
["11738072_a_at",0.041279316,0.0065555573,0.0073957443,-0.092600346,-0.0065555573,-0.04666376,0.40758198,0.07050709,1.0475483,0.06701676,1.0475483,"up","LRCH3",84859.0,"","0005576 // extracellular region // inferred from electronic annotation","","chr3:197518144-197598856 (+) // 84.53 // q29"]
["11716593_x_at",-0.047141075,-0.04609537,0.0080657005,0.026691437,-0.0080657005,0.026572704,0.48335204,0.11443099,-1.0305799,-0.043456394,1.0305799,"down","BTBD1",53339.0,"0016567 // protein ubiquitination // inferred from electronic annotation /// 0043393 // regulation of protein binding // non-traceable author statement","0000932 // cytoplasmic mRNA processing body // inferred from direct assay /// 0000932 // cytoplasmic mRNA processing body // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr15:83685174-83736186 (-) // 96.3 // q25.2"]
["11760831_x_at",-0.011258602,-0.09623718,-0.40151644,0.028515339,0.011258125,0.013575554,0.5749235,0.18917364,-1.1387521,-0.18745372,1.1387521,"down","FAHD2B /// FAHD2CP","151313 /// 729234","0008152 // metabolic process // inferred from electronic annotation","","0003824 // catalytic activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:96676345-96681598 (+) // 71.1 // q11.1 /// chr2:97755320-97760572 (-) // 75.0 // q11.2"]
["11721014_s_at",0.009541512,0.008265495,0.11625862,-0.008265495,-0.12713099,-0.037859917,0.4801549,0.112746544,1.0735881,0.102440625,1.0735881,"up","WTAP",9589.0,"0006397 // mRNA processing // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0031965 // nuclear membrane // inferred from direct assay","","chr6:160148026-160171040 (+) // 99.51 // q25.3"]
["11716588_at",-0.11824894,-0.08002186,0.06341171,0.025527954,0.20886707,-0.025527954,0.64870524,0.27250686,-1.0826564,-0.11457543,1.0826564,"down","TMEM165",55858.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr4:56262089-56292341 (+) // 96.6 // q12"]
["11724015_at",-0.0982523,-0.18160868,0.011821747,0.028378487,0.09857035,-0.011821747,0.49025077,0.11935936,-1.0925672,-0.12772202,1.0925672,"down","FRA10AC1",118924.0,"","0005634 // nucleus // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr10:95428327-95462338 (-) // 79.45 // q23.33"]
["11747477_a_at",0.011483192,0.09078169,-0.26010132,0.06402159,-0.101597786,-0.011483192,0.9227449,0.77121913,-1.0254513,-0.03625898,1.0254513,"down","MAPK8",5599.0,"0000165 // MAPK cascade // inferred from electronic annotation /// 0001503 // ossification // inferred from electronic annotation /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006950 // response to stress // traceable author statement /// 0007254 // JNK cascade // inferred from direct assay /// 0007254 // JNK cascade // traceable author statement /// 0007254 // JNK cascade // inferred from electronic annotation /// 0007258 // JUN phosphorylation // inferred from direct assay /// 0007258 // JUN phosphorylation // inferred from electronic annotation /// 0008063 // Toll signaling pathway // traceable author statement /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0008629 // induction of apoptosis by intracellular signals // traceable author statement /// 0008633 // activation of pro-apoptotic gene products // traceable author statement /// 0009411 // response to UV // inferred from direct assay /// 0010628 // positive regulation of gene expression // inferred from mutant phenotype /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from direct assay /// 0018107 // peptidyl-threonine phosphorylation // inferred from direct assay /// 0018107 // peptidyl-threonine phosphorylation // inferred from mutant phenotype /// 0018107 // peptidyl-threonine phosphorylation // inferred from electronic annotation /// 0031063 // regulation of histone deacetylation // inferred from mutant phenotype /// 0031558 // induction of apoptosis in response to chemical stimulus // inferred from electronic annotation /// 0032091 // negative regulation of protein binding // inferred from direct assay /// 0032880 // regulation of protein localization // inferred from direct assay /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0045087 // innate immune response // traceable author statement /// 0046686 // response to cadmium ion // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // traceable author statement /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0071260 // cellular response to mechanical stimulus // inferred from expression pattern /// 0090045 // positive regulation of deacetylase activity // inferred from mutant phenotype /// 2000017 // positive regulation of determination of dorsal identity // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004705 // JUN kinase activity // inferred from direct assay /// 0004705 // JUN kinase activity // inferred from electronic annotation /// 0004707 // MAP kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0035033 // histone deacetylase regulator activity // inferred from mutant phenotype /// 0042826 // histone deacetylase binding // inferred from physical interaction","chr10:49514681-49643430 (+) // 100.0 // q11.22"]
["11733562_a_at",0.1548214,-0.05491972,0.043473244,-0.123209,-0.043473244,0.043907642,0.68305075,0.3159273,1.0634236,0.08871643,1.0634236,"up","KLHDC10",23008.0,"","","","chr7:129710343-129773593 (+) // 96.7 // q32.2"]
["11721326_at",0.13097596,-0.07319307,-0.082761765,-0.11265874,0.11628246,0.07319331,0.9129608,0.7489439,-1.0237986,-0.03393192,1.0237986,"down","C3orf14",57415.0,"","","","chr3:62304717-62319977 (+) // 97.09 // p14.2"]
["11762121_a_at",-0.05585456,-8.2182884E-4,0.096162796,-0.25272727,0.066295624,8.2182884E-4,0.80962247,0.5216269,1.0533844,0.07503203,1.0533844,"up","DNMT3B",1789.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006306 // DNA methylation // non-traceable author statement /// 0006306 // DNA methylation // traceable author statement /// 0006306 // DNA methylation // inferred from electronic annotation /// 0006346 // methylation-dependent chromatin silencing // inferred from electronic annotation /// 0006349 // regulation of gene expression by genetic imprinting // inferred from electronic annotation /// 0010212 // response to ionizing radiation // inferred from electronic annotation /// 0010424 // DNA methylation on cytosine within a CG sequence // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from mutant phenotype /// 0031503 // protein complex localization // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0043045 // DNA methylation involved in embryo development // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from electronic annotation /// 0045814 // negative regulation of gene expression, epigenetic // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0046498 // S-adenosylhomocysteine metabolic process // inferred from electronic annotation /// 0046499 // S-adenosylmethioninamine metabolic process // inferred from electronic annotation /// 0051571 // positive regulation of histone H3-K4 methylation // inferred from mutant phenotype /// 0051573 // negative regulation of histone H3-K9 methylation // inferred from mutant phenotype /// 0071230 // cellular response to amino acid stimulus // inferred from electronic annotation /// 0090116 // C-5 methylation of cytosine // inferred from direct assay /// 0090116 // C-5 methylation of cytosine // non-traceable author statement /// 0090116 // C-5 methylation of cytosine // traceable author statement /// 0090116 // C-5 methylation of cytosine // inferred from electronic annotation","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000792 // heterochromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005720 // nuclear heterochromatin // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003714 // transcription corepressor activity // inferred from direct assay /// 0003714 // transcription corepressor activity // inferred from mutant phenotype /// 0003886 // DNA (cytosine-5-)-methyltransferase activity // inferred from direct assay /// 0003886 // DNA (cytosine-5-)-methyltransferase activity // non-traceable author statement /// 0003886 // DNA (cytosine-5-)-methyltransferase activity // traceable author statement /// 0003886 // DNA (cytosine-5-)-methyltransferase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0009008 // DNA-methyltransferase activity // non-traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0045322 // unmethylated CpG binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051718 // DNA (cytosine-5-)-methyltransferase activity, acting on CpG substrates // inferred from electronic annotation","chr20:31350451-31386319 (+) // 100.0 // q11.21"]
["11730260_a_at",0.02750349,-0.02415061,0.0017616749,-0.0017619133,0.01723361,-0.054686308,0.8491688,0.60261065,1.0102948,0.01477632,1.0102948,"up","PRKAR2B",5577.0,"0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0001932 // regulation of protein phosphorylation // inferred from electronic annotation /// 0006112 // energy reserve metabolic process // traceable author statement /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006833 // water transport // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007202 // activation of phospholipase C activity // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0007612 // learning // inferred from electronic annotation /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0034199 // activation of protein kinase A activity // traceable author statement /// 0035556 // intracellular signal transduction // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045859 // regulation of protein kinase activity // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0050796 // regulation of insulin secretion // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0071377 // cellular response to glucagon stimulus // traceable author statement","0000267 // cell fraction // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from direct assay /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005626 // insoluble fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005952 // cAMP-dependent protein kinase complex // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0045121 // membrane raft // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0008603 // cAMP-dependent protein kinase regulator activity // inferred from electronic annotation /// 0008603 // cAMP-dependent protein kinase regulator activity // traceable author statement /// 0016301 // kinase activity // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0030552 // cAMP binding // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from direct assay","chr7:106685093-106802256 (+) // 97.34 // q22.3"]
["11734327_a_at",-0.14743376,0.09547567,0.038972378,-0.038972378,-0.045714855,0.2565379,0.86765486,0.64471173,-1.0436313,-0.06161214,1.0436313,"down","CHRM5",1133.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007197 // adenylate cyclase-inhibiting G-protein coupled acetylcholine receptor signaling pathway // traceable author statement /// 0007213 // G-protein coupled acetylcholine receptor signaling pathway // traceable author statement /// 0007213 // G-protein coupled acetylcholine receptor signaling pathway // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0015872 // dopamine transport // inferred from electronic annotation /// 0019226 // transmission of nerve impulse // inferred from electronic annotation /// 0060304 // regulation of phosphatidylinositol dephosphorylation // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0004435 // phosphatidylinositol phospholipase C activity // traceable author statement /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0016907 // G-protein coupled acetylcholine receptor activity // inferred from electronic annotation /// 0016907 // G-protein coupled acetylcholine receptor activity // traceable author statement","chr15:34260445-34357295 (+) // 91.3 // q14"]
["11752851_a_at",0.08224249,-0.12639618,0.009252071,-0.13870573,0.0737586,-0.009252548,0.96335477,0.8875255,1.0091212,0.013099429,1.0091212,"up","PPHLN1",51535.0,"0031424 // keratinization // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","","chr12:42719964-42835231 (+) // 59.36 // q12"]
["11747382_a_at",0.0036129951,0.09165573,0.21977282,-0.036453724,-0.119093895,-0.0036129951,0.4445999,0.091690764,1.1157914,0.15806739,1.1157914,"up","SERGEF",26297.0,"0007165 // signal transduction // traceable author statement /// 0050709 // negative regulation of protein secretion // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0045111 // intermediate filament cytoskeleton // inferred from direct assay","0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005087 // Ran guanyl-nucleotide exchange factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr11:17868108-18034500 (-) // 89.0 // p15.1"]
["11723973_at",-0.05715084,0.05057621,0.0026612282,-0.0026612282,-0.12133694,0.014457703,0.8198339,0.541809,1.0247053,0.035209045,1.0247053,"up","CHST12",55501.0,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0016051 // carbohydrate biosynthetic process // inferred from electronic annotation /// 0030206 // chondroitin sulfate biosynthetic process // inferred from direct assay /// 0030208 // dermatan sulfate biosynthetic process // inferred from direct assay","0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030173 // integral to Golgi membrane // non-traceable author statement","0008146 // sulfotransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0047756 // chondroitin 4-sulfotransferase activity // inferred from direct assay /// 0047756 // chondroitin 4-sulfotransferase activity // inferred from electronic annotation /// 0050656 // 3'-phosphoadenosine 5'-phosphosulfate binding // non-traceable author statement","chr7:2472195-2474426 (+) // 80.02 // p22.3"]
["11747306_x_at",0.032972336,0.054340363,-0.019108772,-0.010029793,-0.03489685,0.010029793,0.62941957,0.24729519,1.0241073,0.03436693,1.0241073,"up","C17orf81",23587.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr17:7155604-7162287 (+) // 98.31 // p13.1"]
["11729468_a_at",0.06358099,-0.010451317,-0.043284893,0.010451794,0.06657362,-0.032945156,0.9342806,0.80276823,-1.0079415,-0.011411886,1.0079415,"down","BZRAP1",9256.0,"","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0030156 // benzodiazepine receptor binding // inferred from physical interaction","chr17:56378591-56406156 (-) // 93.81 // q22"]
["11747774_a_at",-0.06444287,0.088255644,0.010355234,-0.11912036,-0.010354996,0.064442635,0.8737949,0.65752834,1.0231849,0.033066873,1.0231849,"up","SLC11A1",6556.0,"0000060 // protein import into nucleus, translocation // inferred from electronic annotation /// 0001818 // negative regulation of cytokine production // inferred from sequence or structural similarity /// 0001818 // negative regulation of cytokine production // inferred from electronic annotation /// 0001819 // positive regulation of cytokine production // inferred from sequence or structural similarity /// 0001819 // positive regulation of cytokine production // inferred from electronic annotation /// 0002309 // T cell proliferation involved in immune response // inferred from sequence or structural similarity /// 0002309 // T cell proliferation involved in immune response // inferred from electronic annotation /// 0002369 // T cell cytokine production // inferred from sequence or structural similarity /// 0002369 // T cell cytokine production // inferred from electronic annotation /// 0002606 // positive regulation of dendritic cell antigen processing and presentation // inferred from sequence or structural similarity /// 0002606 // positive regulation of dendritic cell antigen processing and presentation // inferred from electronic annotation /// 0002827 // positive regulation of T-helper 1 type immune response // inferred from sequence or structural similarity /// 0002827 // positive regulation of T-helper 1 type immune response // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006826 // iron ion transport // inferred from mutant phenotype /// 0006826 // iron ion transport // inferred from electronic annotation /// 0006828 // manganese ion transport // inferred from sequence or structural similarity /// 0006828 // manganese ion transport // inferred from electronic annotation /// 0006876 // cellular cadmium ion homeostasis // inferred from genetic interaction /// 0006879 // cellular iron ion homeostasis // inferred from mutant phenotype /// 0006909 // phagocytosis // inferred from sequence or structural similarity /// 0006909 // phagocytosis // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from sequence or structural similarity /// 0006954 // inflammatory response // inferred from electronic annotation /// 0006955 // immune response // non-traceable author statement /// 0007035 // vacuolar acidification // inferred from sequence or structural similarity /// 0007035 // vacuolar acidification // inferred from electronic annotation /// 0009617 // response to bacterium // inferred from direct assay /// 0010628 // positive regulation of gene expression // inferred from sequence or structural similarity /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0015707 // nitrite transport // inferred from sequence or structural similarity /// 0015707 // nitrite transport // inferred from electronic annotation /// 0032147 // activation of protein kinase activity // inferred from sequence or structural similarity /// 0032147 // activation of protein kinase activity // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from sequence or structural similarity /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0032623 // interleukin-2 production // inferred from sequence or structural similarity /// 0032623 // interleukin-2 production // inferred from electronic annotation /// 0032632 // interleukin-3 production // inferred from sequence or structural similarity /// 0032632 // interleukin-3 production // inferred from electronic annotation /// 0032729 // positive regulation of interferon-gamma production // inferred from sequence or structural similarity /// 0032729 // positive regulation of interferon-gamma production // inferred from electronic annotation /// 0034341 // response to interferon-gamma // inferred from sequence or structural similarity /// 0034341 // response to interferon-gamma // inferred from electronic annotation /// 0042060 // wound healing // inferred from sequence or structural similarity /// 0042060 // wound healing // inferred from electronic annotation /// 0042116 // macrophage activation // inferred from sequence or structural similarity /// 0042116 // macrophage activation // inferred from electronic annotation /// 0042742 // defense response to bacterium // inferred from sequence or structural similarity /// 0042742 // defense response to bacterium // inferred from electronic annotation /// 0042832 // defense response to protozoan // inferred from sequence or structural similarity /// 0042832 // defense response to protozoan // inferred from electronic annotation /// 0043091 // L-arginine import // inferred from sequence or structural similarity /// 0043091 // L-arginine import // inferred from electronic annotation /// 0045342 // MHC class II biosynthetic process // inferred from sequence or structural similarity /// 0045342 // MHC class II biosynthetic process // inferred from electronic annotation /// 0045730 // respiratory burst // inferred from sequence or structural similarity /// 0045730 // respiratory burst // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048002 // antigen processing and presentation of peptide antigen // inferred from sequence or structural similarity /// 0048002 // antigen processing and presentation of peptide antigen // inferred from electronic annotation /// 0048255 // mRNA stabilization // inferred from sequence or structural similarity /// 0048255 // mRNA stabilization // inferred from electronic annotation /// 0050766 // positive regulation of phagocytosis // inferred from sequence or structural similarity /// 0050766 // positive regulation of phagocytosis // inferred from electronic annotation /// 0050829 // defense response to Gram-negative bacterium // inferred from sequence or structural similarity /// 0050829 // defense response to Gram-negative bacterium // inferred from electronic annotation /// 0055072 // iron ion homeostasis // inferred from sequence or structural similarity /// 0055072 // iron ion homeostasis // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0060586 // multicellular organismal iron ion homeostasis // inferred from sequence or structural similarity /// 0060586 // multicellular organismal iron ion homeostasis // inferred from electronic annotation /// 0070574 // cadmium ion transmembrane transport // inferred from genetic interaction /// 0070839 // divalent metal ion export // inferred from sequence or structural similarity /// 0070839 // divalent metal ion export // inferred from electronic annotation /// 0071421 // manganese ion transmembrane transport // inferred from sequence or structural similarity /// 0071421 // manganese ion transmembrane transport // inferred from electronic annotation","0005764 // lysosome // inferred from sequence or structural similarity /// 0005764 // lysosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from sequence or structural similarity /// 0005770 // late endosome // inferred from electronic annotation /// 0005773 // vacuole // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from mutant phenotype /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0009279 // cell outer membrane // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030670 // phagocytic vesicle membrane // inferred from direct assay /// 0030670 // phagocytic vesicle membrane // inferred from electronic annotation /// 0031902 // late endosome membrane // traceable author statement /// 0070821 // tertiary granule membrane // inferred from direct assay","0005215 // transporter activity // inferred from electronic annotation /// 0005384 // manganese ion transmembrane transporter activity // inferred from sequence or structural similarity /// 0005384 // manganese ion transmembrane transporter activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046915 // transition metal ion transmembrane transporter activity // inferred from genetic interaction /// 0051139 // metal ion:hydrogen antiporter activity // inferred from genetic interaction","chr2:219246973-219252721 (+) // 84.15 // q35"]
["11722524_s_at",-0.06426048,-0.18839025,0.010451317,0.042550087,-0.010451794,0.13178062,0.50472057,0.13050786,-1.0983665,-0.13535953,1.0983665,"down","TMCO4",255104.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr1:20008705-20113611 (-) // 87.5 // p36.13"]
["11716997_x_at",-0.035593033,0.030866623,-0.051362038,-0.014167786,0.014167786,0.047094345,0.69080454,0.32656932,-1.0241268,-0.034394305,1.0241268,"down","TSPAN4",7106.0,"0006461 // protein complex assembly // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr11:842823-867116 (+) // 97.83 // p15.5"]
["11717079_a_at",-0.02149105,0.032544136,-0.011856079,0.019676208,-0.040625572,0.011856079,0.9743758,0.9179786,1.0019172,0.0027633489,1.0019172,"up","VPS52",6293.0,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0005768 // endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","","chr6:33218048-33239701 (-) // 97.61 // p21.32"]
["11750705_a_at",0.12202597,0.058893204,-0.0050086975,0.0050091743,-0.05122423,-0.032406807,0.46248496,0.10257157,1.0605731,0.08484406,1.0605731,"up","OSBP2",23762.0,"0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation","0005543 // phospholipid binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation","chr22:31218502-31302701 (+) // 99.92 // q12.2"]
["11718627_at",-0.05927992,-0.09250069,0.106739044,0.045039177,0.053195953,-0.045039177,0.8751083,0.6607299,-1.0229572,-0.032745793,1.0229572,"down","TRAK1",22906.0,"0006357 // regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0006493 // protein O-linked glycosylation // inferred from sequence or structural similarity /// 0006605 // protein targeting // inferred from sequence or structural similarity /// 0008333 // endosome to lysosome transport // inferred from direct assay","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0005769 // early endosome // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0016740 // transferase activity // inferred from electronic annotation /// 0050811 // GABA receptor binding // inferred from electronic annotation","chr3:42132745-42267381 (+) // 98.06 // p22.1"]
["11727110_a_at",0.0021400452,0.06982851,-0.046993494,-0.0021402836,0.04264283,-0.14777637,0.8217417,0.5448832,1.0310276,0.04408289,1.0310276,"up","WSCD2",9671.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr12:108523119-108644311 (+) // 98.65 // q23.3"]
["11742650_at",-0.14635563,0.10303402,-0.2750609,0.17393756,-0.04489541,0.04489565,0.64514625,0.2686667,-1.1204722,-0.16410685,1.1204722,"down","DPRX",503834.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr19:54135309-54140263 (+) // 100.0 // q13.42"]
["11751513_a_at",0.020503044,0.10420179,-0.024529934,-0.020502806,0.095541,-0.087049246,0.8466698,0.5977168,1.0262593,0.0373953,1.0262593,"up","NME9",347736.0,"0006165 // nucleoside diphosphate phosphorylation // inferred from electronic annotation /// 0006183 // GTP biosynthetic process // inferred from electronic annotation /// 0006228 // UTP biosynthetic process // inferred from electronic annotation /// 0006241 // CTP biosynthetic process // inferred from electronic annotation /// 0045454 // cell redox homeostasis // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation","0004550 // nucleoside diphosphate kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation","chr3:137980932-138048686 (-) // 94.51 // q22.3"]
["11724629_at",-0.06839657,-0.045536995,0.02080822,-0.0024442673,0.021450043,0.0024442673,0.6234553,0.24042739,-1.026826,-0.038191766,1.026826,"down","TUSC1",286319.0,"","","","chr9:25676388-25678856 (-) // 96.9 // p21.2"]
["11745357_x_at",-0.017065048,-0.05846882,-0.0030546188,0.0030546188,0.04556656,0.047841072,0.37919846,0.057637326,-1.0412743,-0.058350176,1.0412743,"down","AP1S1",1174.0,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006892 // post-Golgi vesicle-mediated transport // traceable author statement /// 0006897 // endocytosis // inferred from electronic annotation /// 0006898 // receptor-mediated endocytosis // traceable author statement /// 0009615 // response to virus // inferred from expression pattern /// 0015031 // protein transport // inferred from electronic annotation /// 0016032 // viral reproduction // traceable author statement /// 0016044 // cellular membrane organization // traceable author statement /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0050690 // regulation of defense response to virus by virus // traceable author statement","0000139 // Golgi membrane // traceable author statement /// 0005765 // lysosomal membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005905 // coated pit // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030117 // membrane coat // inferred from electronic annotation /// 0030121 // AP-1 adaptor complex // traceable author statement /// 0030130 // clathrin coat of trans-Golgi network vesicle // non-traceable author statement /// 0030659 // cytoplasmic vesicle membrane // traceable author statement /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0008565 // protein transporter activity // inferred from electronic annotation","chr7:100799873-100804556 (+) // 94.28 // q22.1"]
["11729051_a_at",-0.003627777,-0.013617039,0.003627777,0.037962914,-0.16117,0.048624516,0.92664504,0.7811991,1.0141857,0.02032179,1.0141857,"up","PPFIBP1",8496.0,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0015074 // DNA integration // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation","0005886 // plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008907 // integrase activity // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr12:27677044-27800910 (+) // 95.42 // p11.23"]
["11744232_a_at",0.076376915,0.045484543,0.16057587,-0.05642414,-0.045484543,-0.055646896,0.22051114,0.013238677,1.107007,0.14666438,1.107007,"up","RFC5",5985.0,"0000075 // cell cycle checkpoint // traceable author statement /// 0000084 // S phase of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0000722 // telomere maintenance via recombination // traceable author statement /// 0000723 // telomere maintenance // traceable author statement /// 0006260 // DNA replication // non-traceable author statement /// 0006260 // DNA replication // traceable author statement /// 0006260 // DNA replication // inferred from electronic annotation /// 0006271 // DNA strand elongation involved in DNA replication // traceable author statement /// 0006281 // DNA repair // non-traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006283 // transcription-coupled nucleotide-excision repair // traceable author statement /// 0006289 // nucleotide-excision repair // traceable author statement /// 0006297 // nucleotide-excision repair, DNA gap filling // traceable author statement /// 0032201 // telomere maintenance via semi-conservative replication // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005663 // DNA replication factor C complex // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0019899 // enzyme binding // non-traceable author statement","chr12:118454507-118471352 (+) // 83.8 // q24.23"]
["11731587_a_at",-0.01625204,0.01625204,0.29296923,0.17866945,-0.18789697,-0.01973486,0.79707533,0.49863404,1.0772182,0.107310474,1.0772182,"up","SEPT4",5414.0,"0000910 // cytokinesis // traceable author statement /// 0006184 // GTP catabolic process // traceable author statement /// 0006915 // apoptotic process // non-traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007286 // spermatid development // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0030382 // sperm mitochondrion organization // inferred from electronic annotation /// 0031398 // positive regulation of protein ubiquitination // inferred from direct assay /// 0042981 // regulation of apoptotic process // non-traceable author statement /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0048240 // sperm capacitation // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 2001244 // positive regulation of intrinsic apoptotic signaling pathway // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // non-traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0009434 // microtubule-based flagellum // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0005198 // structural molecule activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation","chr17:56597616-56609454 (-) // 99.39 // q22"]
["11730944_a_at",0.08659434,0.114515066,-0.10047507,-0.12286067,0.115675926,-0.08659434,0.825967,0.5534539,1.0459431,0.06480443,1.0459431,"up","CCDC65",85478.0,"","","","chr12:49297892-49315354 (+) // 98.75 // q13.12"]
["11748495_a_at",0.037193775,0.0,0.117807865,-0.039733887,-0.29854727,0.0,0.5598621,0.17494985,1.1207213,0.16442761,1.1207213,"up","OSR2",116039.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001656 // metanephros development // inferred from sequence or structural similarity /// 0001656 // metanephros development // inferred from electronic annotation /// 0001823 // mesonephros development // inferred from sequence or structural similarity /// 0001823 // mesonephros development // inferred from electronic annotation /// 0002062 // chondrocyte differentiation // inferred from sequence or structural similarity /// 0002062 // chondrocyte differentiation // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from sequence or structural similarity /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0009790 // embryo development // inferred from sequence or structural similarity /// 0009790 // embryo development // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from sequence or structural similarity /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from sequence or structural similarity /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030501 // positive regulation of bone mineralization // inferred from sequence or structural similarity /// 0030501 // positive regulation of bone mineralization // inferred from electronic annotation /// 0033687 // osteoblast proliferation // inferred from sequence or structural similarity /// 0033687 // osteoblast proliferation // inferred from electronic annotation /// 0035115 // embryonic forelimb morphogenesis // inferred from sequence or structural similarity /// 0035115 // embryonic forelimb morphogenesis // inferred from electronic annotation /// 0035116 // embryonic hindlimb morphogenesis // inferred from sequence or structural similarity /// 0035116 // embryonic hindlimb morphogenesis // inferred from electronic annotation /// 0036023 // embryonic skeletal limb joint morphogenesis // inferred from sequence or structural similarity /// 0036023 // embryonic skeletal limb joint morphogenesis // inferred from electronic annotation /// 0042474 // middle ear morphogenesis // inferred from sequence or structural similarity /// 0042474 // middle ear morphogenesis // inferred from electronic annotation /// 0042476 // odontogenesis // inferred from sequence or structural similarity /// 0042476 // odontogenesis // inferred from electronic annotation /// 0042733 // embryonic digit morphogenesis // inferred from sequence or structural similarity /// 0042733 // embryonic digit morphogenesis // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048704 // embryonic skeletal system morphogenesis // inferred from sequence or structural similarity /// 0048704 // embryonic skeletal system morphogenesis // inferred from electronic annotation /// 0048793 // pronephros development // inferred from electronic annotation /// 0050679 // positive regulation of epithelial cell proliferation // inferred from sequence or structural similarity /// 0050679 // positive regulation of epithelial cell proliferation // inferred from electronic annotation /// 0060021 // palate development // inferred from sequence or structural similarity /// 0060021 // palate development // inferred from electronic annotation /// 0060272 // embryonic skeletal joint morphogenesis // inferred from sequence or structural similarity /// 0060272 // embryonic skeletal joint morphogenesis // inferred from electronic annotation /// 0060322 // head development // inferred from sequence or structural similarity /// 0060322 // head development // inferred from electronic annotation /// 0060349 // bone morphogenesis // inferred from sequence or structural similarity /// 0060349 // bone morphogenesis // inferred from electronic annotation /// 0061029 // eyelid development in camera-type eye // inferred from sequence or structural similarity /// 0061029 // eyelid development in camera-type eye // inferred from electronic annotation /// 0072498 // embryonic skeletal joint development // inferred from sequence or structural similarity /// 0072498 // embryonic skeletal joint development // inferred from electronic annotation /// 2000543 // positive regulation of gastrulation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from sequence or structural similarity /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:99956669-99963990 (+) // 99.94 // q22.2"]
["11716172_at",3.7670135E-4,-0.013287544,-3.7670135E-4,-0.036172867,0.00889492,0.01911354,0.9772104,0.9271777,-1.0011843,-0.0017076366,1.0011843,"down","SYVN1",84447.0,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0030433 // ER-associated protein catabolic process // inferred from direct assay /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:64893931-64902003 (-) // 96.38 // q13.1"]
["11762329_s_at",-0.1716795,0.19173169,-0.09169245,0.084067106,0.18029237,-0.084067106,0.8320595,0.5665642,-1.0599363,-0.08397754,1.0599363,"down","YME1L1",10730.0,"0006508 // proteolysis // inferred from electronic annotation /// 0006515 // misfolded or incompletely synthesized protein catabolic process // inferred from mutant phenotype /// 0006955 // immune response // non-traceable author statement /// 0006968 // cellular defense response // non-traceable author statement /// 0007005 // mitochondrion organization // inferred from mutant phenotype /// 0008283 // cell proliferation // inferred from mutant phenotype /// 0030163 // protein catabolic process // inferred from electronic annotation /// 0031295 // T cell costimulation // traceable author statement /// 0045768 // positive regulation of anti-apoptosis // inferred from mutant phenotype /// 0050776 // regulation of immune response // traceable author statement /// 0050852 // T cell receptor signaling pathway // traceable author statement","0005743 // mitochondrial inner membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // non-traceable author statement /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0042287 // MHC protein binding // non-traceable author statement /// 0042605 // peptide antigen binding // non-traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation","chr14:22465924-23019607 (+) // 99.04 // q11.2"]
["11734631_s_at",-0.039494514,-0.070156574,0.039494514,0.10382414,0.07160044,-0.061843872,0.718324,0.3673669,-1.0433663,-0.061245758,1.0433663,"down","BAGE2 /// BAGE3 /// BAGE4 /// BAGE5 /// MLL3","58508 /// 85316 /// 85317 /// 85318 /// 85319","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0016571 // histone methylation // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0051568 // histone H3-K4 methylation // inferred from direct assay /// 0051568 // histone H3-K4 methylation // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0035097 // histone methyltransferase complex // inferred from direct assay /// 0035097 // histone methyltransferase complex // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0018024 // histone-lysine N-methyltransferase activity // inferred from electronic annotation /// 0042800 // histone methyltransferase activity (H3-K4 specific) // inferred from direct assay /// 0042800 // histone methyltransferase activity (H3-K4 specific) // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr21:11020476-11058324 (-) // 81.44 // p11.1"]
["11745505_x_at",0.067923546,-0.0070853233,0.12927008,-0.07457161,-0.053277493,0.0070858,0.4403752,0.089269705,1.074469,0.103623815,1.074469,"up","ITSN1",6453.0,"0006897 // endocytosis // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0042327 // positive regulation of phosphorylation // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048488 // synaptic vesicle endocytosis // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement /// 0051897 // positive regulation of protein kinase B signaling cascade // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005905 // coated pit // inferred from direct assay /// 0005905 // coated pit // inferred from electronic annotation /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030139 // endocytic vesicle // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0005085 // guanyl-nucleotide exchange factor activity // non-traceable author statement /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005509 // calcium ion binding // non-traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0019209 // kinase activator activity // inferred from electronic annotation /// 0032947 // protein complex scaffold // inferred from direct assay /// 0070064 // proline-rich region binding // inferred from physical interaction","chr21:35014705-35209342 (+) // 96.89 // q22.11"]
["11752694_x_at",0.015647411,-0.026576519,0.029991627,-0.022913933,-0.010527134,0.010527134,0.80601573,0.51441735,1.0097458,0.013992197,1.0097458,"up","PRR11",55771.0,"","","","chr17:57233117-57281195 (+) // 73.42 // q22"]
["11716637_at",-0.0063028336,0.0063028336,0.03463173,-0.0074043274,0.019673347,-0.037791252,0.7289982,0.38428706,1.0139955,0.02005129,1.0139955,"up","EMC7",56851.0,"","0005737 // cytoplasm // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation /// 0072546 // ER membrane protein complex // inferred from direct assay","0004180 // carboxypeptidase activity // inferred from electronic annotation /// 0017076 // purine nucleotide binding // non-traceable author statement /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr15:34376217-34394149 (-) // 96.98 // q14"]
["11723720_at",0.055109978,0.03669262,-0.010503292,-0.24070597,0.010503292,-0.22402048,0.45682687,0.099100545,1.1317124,0.17850742,1.1317124,"up","SLAIN2",57606.0,"0007020 // microtubule nucleation // inferred from mutant phenotype /// 0031113 // regulation of microtubule polymerization // inferred from electronic annotation /// 0031116 // positive regulation of microtubule polymerization // inferred from mutant phenotype /// 0031122 // cytoplasmic microtubule organization // inferred from mutant phenotype /// 0031122 // cytoplasmic microtubule organization // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0035371 // microtubule plus end // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr4:48342960-48428218 (+) // 98.62 // p11"]
["11740340_at",-0.16302204,-0.087649345,0.14218998,0.089235306,0.05178833,-0.05178833,0.82407016,0.5497236,-1.0467417,-0.06590551,1.0467417,"down","F2RL3",9002.0,"0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007200 // phospholipase C-activating G-protein coupled receptor signaling pathway // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0007596 // blood coagulation // inferred from electronic annotation /// 0007599 // hemostasis // inferred from electronic annotation /// 0009611 // response to wounding // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0051281 // positive regulation of release of sequestered calcium ion into cytosol // inferred from direct assay /// 0060155 // platelet dense granule organization // inferred by curator /// 0070493 // thrombin receptor signaling pathway // traceable author statement /// 0070493 // thrombin receptor signaling pathway // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0015057 // thrombin receptor activity // inferred from electronic annotation /// 0015057 // thrombin receptor activity // traceable author statement","chr19:16999670-17009516 (+) // 59.58 // p13.11"]
["11747057_at",0.009101391,0.061418056,-0.2316289,-0.009101391,0.2453289,-0.13876629,0.8387581,0.5828791,-1.0615631,-0.08619017,1.0615631,"down","LOC100130539",1.00130539E8,"","","","chr10:44788197-44790179 (+) // 71.22 // q11.21"]
["11757203_at",-0.077166796,0.024608135,-0.024608135,0.08056784,0.122606516,-0.039156437,0.61437887,0.2290099,-1.0573074,-0.080394834,1.0573074,"down","RP11-165H20.1",149620.0,"","","","chr1:111823145-111828730 (+) // 90.51 // p13.2"]
["11762970_at",-0.061291695,0.07105923,-0.05359435,-0.066078424,0.20406103,0.05359435,0.75820214,0.42845687,-1.0558962,-0.078467965,1.0558962,"down",-0.066078424,0.20406103,0.05359435,-0.061291695,0.07105923,-0.05359435]
["11748711_a_at",0.042160034,0.02553749,0.061582565,-0.0751667,-0.02553749,-0.07503891,0.16985813,0.0064902576,1.0730181,0.10167438,1.0730181,"up","EIF4G3",8672.0,"0001934 // positive regulation of protein phosphorylation // inferred from electronic annotation /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006446 // regulation of translational initiation // traceable author statement /// 0007128 // meiotic prophase I // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0016070 // RNA metabolic process // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045727 // positive regulation of translation // inferred from electronic annotation","0005829 // cytosol // traceable author statement /// 0016281 // eukaryotic translation initiation factor 4F complex // traceable author statement","0000339 // RNA cap binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0008135 // translation factor activity, nucleic acid binding // traceable author statement","chr1:21133740-21296462 (-) // 96.55 // p36.12"]
["11715289_s_at",0.039071083,-0.10052776,-0.07059288,0.10753298,-0.039071083,0.060373783,0.6102348,0.22435889,-1.062131,-0.086961776,1.062131,"down","AGRP",181.0,"0007218 // neuropeptide signaling pathway // inferred from direct assay /// 0007218 // neuropeptide signaling pathway // inferred from electronic annotation /// 0007218 // neuropeptide signaling pathway // traceable author statement /// 0007631 // feeding behavior // traceable author statement /// 0008343 // adult feeding behavior // inferred from electronic annotation /// 0009755 // hormone-mediated signaling pathway // inferred from electronic annotation /// 0060259 // regulation of feeding behavior // inferred from direct assay","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005796 // Golgi lumen // inferred from direct assay /// 0005796 // Golgi lumen // inferred from electronic annotation","0005102 // receptor binding // traceable author statement /// 0005184 // neuropeptide hormone activity // inferred from direct assay /// 0005184 // neuropeptide hormone activity // inferred from electronic annotation /// 0005184 // neuropeptide hormone activity // traceable author statement","chr16:67516473-67517304 (-) // 96.09 // q22.1"]
["11730392_at",0.21196175,0.1819396,-0.03473568,-0.16731215,0.03473568,-0.046625614,0.5178072,0.13916166,1.1324568,0.17945598,1.1324568,"up","GPR4",2828.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement","chr19:46093021-46105466 (-) // 84.3 // q13.32"]
["11724261_a_at",0.068525314,0.109659195,-0.023370743,-0.06472254,0.023370743,-0.12765884,0.51946056,0.14060508,1.0776894,0.10794145,1.0776894,"up","TRIO",7204.0,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0007185 // transmembrane receptor protein tyrosine phosphatase signaling pathway // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0005085 // guanyl-nucleotide exchange factor activity // traceable author statement /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr5:14143810-14509520 (+) // 97.2 // p15.2"]
["11750884_a_at",0.085971355,0.044255257,0.065006256,-0.044255733,-0.049972534,-0.046191692,0.08459432,7.7483425E-4,1.0806388,0.11188434,1.0806388,"up","AKAP8L",26993.0,"0016310 // phosphorylation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016363 // nuclear matrix // inferred from direct assay /// 0016363 // nuclear matrix // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0017151 // DEAD/H-box RNA helicase binding // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:15490861-15529837 (-) // 98.5 // p13.12"]
["11754116_x_at",0.15084076,-0.031318426,0.028792858,-0.13158917,0.056969166,-0.028793097,0.6961846,0.33395344,1.0598862,0.08390939,1.0598862,"up","S100B",6285.0,"0007409 // axonogenesis // traceable author statement /// 0007417 // central nervous system development // traceable author statement /// 0007611 // learning or memory // inferred from sequence or structural similarity /// 0007611 // learning or memory // inferred from electronic annotation /// 0007613 // memory // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from direct assay /// 0045087 // innate immune response // traceable author statement /// 0048168 // regulation of neuronal synaptic plasticity // inferred from electronic annotation","0001726 // ruffle // inferred from direct assay /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0005102 // receptor binding // inferred from electronic annotation /// 0005509 // calcium ion binding // non-traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005509 // calcium ion binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from sequence or structural similarity /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0044548 // S100 protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0048156 // tau protein binding // inferred from sequence or structural similarity /// 0048306 // calcium-dependent protein binding // inferred from direct assay /// 0050786 // RAGE receptor binding // inferred from physical interaction","chr21:48019287-48024977 (-) // 63.37 // q22.3"]
["11723098_a_at",0.0010025501,-0.0010025501,0.00457263,0.07651615,-0.021227837,-0.048090696,0.9947212,0.98268497,-1.0006067,-8.7495433E-4,1.0006067,"down","VTCN1",79679.0,"0050868 // negative regulation of T cell activation // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005102 // receptor binding // inferred from electronic annotation","chr1:117686209-117753582 (-) // 87.14 // p13.1"]
["11748401_x_at",1.8119812E-5,0.029055595,0.014204025,-0.06609726,-1.8119812E-5,-0.024175644,0.4612987,0.10185087,1.031342,0.04452286,1.031342,"up","TPM4",7171.0,"0006928 // cellular component movement // traceable author statement /// 0006936 // muscle contraction // traceable author statement /// 0006979 // response to oxidative stress // inferred from expression pattern /// 0030049 // muscle filament sliding // traceable author statement","0001725 // stress fiber // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005862 // muscle thin filament tropomyosin // traceable author statement","0003779 // actin binding // inferred from electronic annotation /// 0005509 // calcium ion binding // non-traceable author statement /// 0008307 // structural constituent of muscle // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:16187304-16212764 (+) // 99.78 // p13.12"]
["11734319_a_at",0.016427517,0.008072615,-0.13574862,0.039793253,-0.06900954,-0.008072853,0.8893534,0.69546175,-1.017235,-0.024653064,1.017235,"down","SLC17A4",10050.0,"0006796 // phosphate-containing compound metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // traceable author statement /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005436 // sodium:phosphate symporter activity // traceable author statement /// 0015293 // symporter activity // inferred from electronic annotation","chr6:25754964-25781454 (+) // 86.64 // p22.2"]
["11718617_a_at",0.023302078,0.057873726,0.053437233,-0.043114662,-0.023302078,-0.119903564,0.28743804,0.027095672,1.0769697,0.106977716,1.0769697,"up","DNAJA4",55466.0,"0006457 // protein folding // inferred from electronic annotation /// 0009408 // response to heat // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation","0005524 // ATP binding // inferred from electronic annotation /// 0031072 // heat shock protein binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // inferred from electronic annotation","chr15:78556427-78574538 (+) // 99.27 // q25.1"]
["11737511_a_at",-0.07032275,0.08801246,0.042860985,0.18832779,-0.15425849,-0.042860985,0.94926846,0.84568393,1.0161505,0.023114055,1.0161505,"up","SP100",6672.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006978 // DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator // inferred from direct assay /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0032526 // response to retinoic acid // inferred from direct assay /// 0032897 // negative regulation of viral transcription // inferred from direct assay /// 0034097 // response to cytokine stimulus // inferred from direct assay /// 0034340 // response to type I interferon // inferred from direct assay /// 0034340 // response to type I interferon // inferred from mutant phenotype /// 0034341 // response to interferon-gamma // inferred from direct assay /// 0034341 // response to interferon-gamma // inferred from mutant phenotype /// 0043392 // negative regulation of DNA binding // inferred from direct assay /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0048384 // retinoic acid receptor signaling pathway // inferred by curator /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0051271 // negative regulation of cellular component movement // inferred from mutant phenotype /// 0060333 // interferon-gamma-mediated signaling pathway // inferred by curator /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060337 // type I interferon-mediated signaling pathway // inferred by curator","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from mutant phenotype /// 0005737 // cytoplasm // inferred from direct assay /// 0016605 // PML body // inferred from direct assay /// 0016605 // PML body // inferred from electronic annotation /// 0034399 // nuclear periphery // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0003714 // transcription corepressor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0019900 // kinase binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070087 // chromo shadow domain binding // inferred from physical interaction","chr2:231280870-231408300 (+) // 52.53 // q37.1"]
["11762783_at",-0.021718502,0.11305261,-0.023260832,-0.30955553,0.031011105,0.021718502,0.7527949,0.4205678,1.077957,0.10829967,1.077957,"up","RPL18A",6142.0,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral infectious cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // traceable author statement","chr19:17970729-17974962 (+) // 99.78 // p13.11"]
["11738568_at",-0.023998737,0.024717808,-0.11550236,0.017093182,0.0011239052,-0.0011239052,0.70698994,0.3492067,-1.0309389,-0.04395878,1.0309389,"down","KRTAP5-3",387266.0,"","0005882 // intermediate filament // inferred from electronic annotation /// 0045095 // keratin filament // inferred from electronic annotation","","chr11:1628310-1629693 (-) // 85.36 // p15.5"]
["11753154_a_at",0.055512905,-4.7564507E-4,4.7540665E-4,0.046505213,-0.02955556,-0.036076307,0.79088384,0.4844676,1.0173949,0.024879767,1.0173949,"up","LHFPL1",340596.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chrX:111874276-111923274 (-) // 100.0 // q23"]
["11753258_s_at",-0.058908463,-0.05281353,-0.046341896,0.08621502,0.05273342,0.046341896,0.086976536,8.876576E-4,-1.0825633,-0.114451356,1.0825633,"down","EGFL8 /// PPT2 /// PPT2-EGFL8","100532746 /// 80864 /// 9374","0001701 // in utero embryonic development // inferred from sequence or structural similarity /// 0006464 // cellular protein modification process // non-traceable author statement /// 0006464 // cellular protein modification process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005764 // lysosome // non-traceable author statement /// 0005764 // lysosome // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0016021 // integral to membrane // non-traceable author statement","0005509 // calcium ion binding // inferred from electronic annotation /// 0008474 // palmitoyl-(protein) hydrolase activity // non-traceable author statement /// 0008474 // palmitoyl-(protein) hydrolase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016790 // thiolester hydrolase activity // non-traceable author statement","chr6:32121846-32134009 (+) // 99.62 // p21.32"]
["11728877_s_at",0.11552429,0.111228466,-0.065167904,-0.036557198,-0.02355671,0.023556232,0.70670474,0.34860954,1.0468447,0.06604746,1.0468447,"up","ARID1B",57492.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0048096 // chromatin-mediated maintenance of transcription // non-traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0016514 // SWI/SNF complex // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from direct assay /// 0003713 // transcription coactivator activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr6:157099085-157530396 (+) // 91.62 // q25.3"]
["11759126_a_at",0.05780506,0.114564896,-0.0148983,4.5776367E-4,-4.5776367E-4,-0.039642334,0.55875736,0.17351513,1.046596,0.06570472,1.046596,"up","THRA",7067.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006366 // transcription from RNA polymerase II promoter // inferred from direct assay /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0007623 // circadian rhythm // inferred from electronic annotation /// 0009755 // hormone-mediated signaling pathway // inferred from direct assay /// 0010467 // gene expression // traceable author statement /// 0010871 // negative regulation of receptor biosynthetic process // inferred from mutant phenotype /// 0017055 // negative regulation of RNA polymerase II transcriptional preinitiation complex assembly // inferred from direct assay /// 0030522 // intracellular receptor mediated signaling pathway // traceable author statement /// 0034144 // negative regulation of toll-like receptor 4 signaling pathway // inferred from mutant phenotype /// 0043401 // steroid hormone mediated signaling pathway // inferred from electronic annotation /// 0043401 // steroid hormone mediated signaling pathway // traceable author statement /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0071222 // cellular response to lipopolysaccharide // inferred from mutant phenotype /// 2000143 // negative regulation of transcription initiation, DNA-dependent // inferred from direct assay /// 2000189 // positive regulation of cholesterol homeostasis // inferred from direct assay","0000790 // nuclear chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005829 // cytosol // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003707 // steroid hormone receptor activity // inferred from electronic annotation /// 0003707 // steroid hormone receptor activity // traceable author statement /// 0003714 // transcription corepressor activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0004879 // ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity // traceable author statement /// 0004887 // thyroid hormone receptor activity // inferred from direct assay /// 0004887 // thyroid hormone receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0017025 // TBP-class protein binding // inferred from direct assay /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070324 // thyroid hormone binding // inferred from direct assay /// 0070324 // thyroid hormone binding // inferred from physical interaction","chr17:38219062-38249110 (+) // 97.76 // q21.1"]
["11726358_a_at",0.063307285,-0.091220856,0.035267353,0.024762154,-0.20395136,-0.024761677,0.7697247,0.44979832,1.0500332,0.07043496,1.0500332,"up","MLL5",55904.0,"0002446 // neutrophil mediated immunity // inferred from sequence or structural similarity /// 0002446 // neutrophil mediated immunity // inferred from electronic annotation /// 0006306 // DNA methylation // inferred from sequence or structural similarity /// 0006306 // DNA methylation // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0030218 // erythrocyte differentiation // inferred from sequence or structural similarity /// 0030218 // erythrocyte differentiation // inferred from electronic annotation /// 0030854 // positive regulation of granulocyte differentiation // inferred from mutant phenotype /// 0032259 // methylation // inferred from electronic annotation /// 0034968 // histone lysine methylation // inferred from electronic annotation /// 0042119 // neutrophil activation // inferred from sequence or structural similarity /// 0042119 // neutrophil activation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0048384 // retinoic acid receptor signaling pathway // inferred from mutant phenotype /// 0051568 // histone H3-K4 methylation // inferred from direct assay /// 0071300 // cellular response to retinoic acid // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation /// 0070688 // MLL5-L complex // inferred from direct assay","0003713 // transcription coactivator activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0018024 // histone-lysine N-methyltransferase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0042800 // histone methyltransferase activity (H3-K4 specific) // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:104654630-104754808 (+) // 99.4 // q22.3"]
["11731654_at",0.052910566,0.029588223,-0.2326622,0.052910566,-0.029587984,-0.033400774,0.87047976,0.65141237,-1.032896,-0.046695057,1.032896,"down","ARL15",54622.0,"0007264 // small GTPase mediated signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation","chr5:53180213-53606426 (-) // 90.25 // q11.2"]
["11740827_at",0.005718231,-0.042128086,0.07829094,-0.09028268,0.057314873,-0.005718231,0.8710695,0.65239835,1.0187893,0.0268557,1.0187893,"up","HES3",390992.0,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0021555 // midbrain-hindbrain boundary morphogenesis // inferred from electronic annotation /// 0021557 // oculomotor nerve development // inferred from electronic annotation /// 0021558 // trochlear nerve development // inferred from electronic annotation /// 0021575 // hindbrain morphogenesis // inferred from electronic annotation /// 0021915 // neural tube development // inferred from electronic annotation /// 0030901 // midbrain development // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0060164 // regulation of timing of neuron differentiation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0008134 // transcription factor binding // non-traceable author statement","chr1:6304253-6305638 (+) // 96.84 // p36.31"]
["11726673_s_at",-0.08859873,-0.08057165,0.29346824,0.08057165,0.18701077,-0.123167515,0.99009037,0.9676607,-1.0046588,-0.006705646,1.0046588,"down","ASCL1",429.0,"0001764 // neuron migration // inferred from electronic annotation /// 0003359 // noradrenergic neuron fate commitment // inferred from mutant phenotype /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0007219 // Notch signaling pathway // inferred from direct assay /// 0007219 // Notch signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007389 // pattern specification process // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007400 // neuroblast fate determination // inferred from electronic annotation /// 0007405 // neuroblast proliferation // inferred from electronic annotation /// 0008593 // regulation of Notch signaling pathway // inferred from electronic annotation /// 0010001 // glial cell differentiation // inferred from electronic annotation /// 0010226 // response to lithium ion // inferred from electronic annotation /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0014003 // oligodendrocyte development // inferred from electronic annotation /// 0021527 // spinal cord association neuron differentiation // inferred from electronic annotation /// 0021530 // spinal cord oligodendrocyte cell fate specification // inferred from electronic annotation /// 0021750 // vestibular nucleus development // inferred from electronic annotation /// 0021779 // oligodendrocyte cell fate commitment // inferred from electronic annotation /// 0021879 // forebrain neuron differentiation // inferred from electronic annotation /// 0021892 // cerebral cortex GABAergic interneuron differentiation // inferred from expression pattern /// 0021954 // central nervous system neuron development // inferred from electronic annotation /// 0021987 // cerebral cortex development // inferred from electronic annotation /// 0022008 // neurogenesis // inferred from direct assay /// 0022008 // neurogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0032526 // response to retinoic acid // inferred from expression pattern /// 0032526 // response to retinoic acid // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043525 // positive regulation of neuron apoptotic process // inferred from electronic annotation /// 0045665 // negative regulation of neuron differentiation // inferred from direct assay /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from sequence or structural similarity /// 0045666 // positive regulation of neuron differentiation // inferred from electronic annotation /// 0045747 // positive regulation of Notch signaling pathway // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048485 // sympathetic nervous system development // non-traceable author statement /// 0048663 // neuron fate commitment // inferred from electronic annotation /// 0048665 // neuron fate specification // inferred from electronic annotation /// 0048666 // neuron development // inferred from electronic annotation /// 0048709 // oligodendrocyte differentiation // inferred from electronic annotation /// 0050769 // positive regulation of neurogenesis // inferred from electronic annotation /// 0051593 // response to folic acid // inferred from electronic annotation /// 0060163 // subpallium neuron fate commitment // inferred from electronic annotation /// 0060165 // regulation of timing of subpallium neuron differentiation // inferred from electronic annotation /// 0060166 // olfactory pit development // inferred from electronic annotation /// 0060487 // lung epithelial cell differentiation // non-traceable author statement /// 0061100 // lung neuroendocrine cell differentiation // inferred from electronic annotation /// 0061102 // stomach neuroendocrine cell differentiation // inferred from electronic annotation /// 0061103 // carotid body glomus cell differentiation // inferred from electronic annotation /// 0061104 // adrenal chromaffin cell differentiation // inferred from electronic annotation /// 0070849 // response to epidermal growth factor stimulus // inferred from electronic annotation /// 0071259 // cellular response to magnetism // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation","0000989 // transcription factor binding transcription factor activity // inferred from sequence or structural similarity /// 0003677 // DNA binding // inferred from sequence or structural similarity /// 0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0043425 // bHLH transcription factor binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0070888 // E-box binding // inferred from direct assay","chr12:103351421-103354291 (+) // 93.85 // q23.2"]
["11726507_a_at",-0.019300938,0.15563822,-0.15563774,-0.24757624,0.03997469,0.019300938,0.8858594,0.6853013,1.0398197,0.056333415,1.0398197,"up","CDKN2B",1030.0,"0000079 // regulation of cyclin-dependent protein kinase activity // inferred from direct assay /// 0000080 // G1 phase of mitotic cell cycle // traceable author statement /// 0000086 // G2/M transition of mitotic cell cycle // inferred from mutant phenotype /// 0000278 // mitotic cell cycle // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from mutant phenotype /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030219 // megakaryocyte differentiation // inferred from expression pattern /// 0030511 // positive regulation of transforming growth factor beta receptor signaling pathway // inferred from mutant phenotype /// 0030858 // positive regulation of epithelial cell differentiation // inferred from electronic annotation /// 0031575 // mitotic cell cycle G1/S transition checkpoint // inferred from mutant phenotype /// 0031668 // cellular response to extracellular stimulus // inferred from mutant phenotype /// 0031670 // cellular response to nutrient // inferred from mutant phenotype /// 0034097 // response to cytokine stimulus // inferred from electronic annotation /// 0042326 // negative regulation of phosphorylation // inferred from direct assay /// 0050680 // negative regulation of epithelial cell proliferation // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0004861 // cyclin-dependent protein kinase inhibitor activity // inferred from direct assay /// 0004861 // cyclin-dependent protein kinase inhibitor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016301 // kinase activity // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction","chr9:22002897-22009312 (-) // 92.18 // p21.3"]
["11754200_a_at",0.07882643,0.0,0.10782957,-0.07397652,-0.10582352,0.0,0.36845154,0.05311997,1.0883571,0.122151986,1.0883571,"up","CREBBP",1387.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0001666 // response to hypoxia // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006461 // protein complex assembly // traceable author statement /// 0007165 // signal transduction // non-traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007219 // Notch signaling pathway // traceable author statement /// 0008283 // cell proliferation // inferred from electronic annotation /// 0008589 // regulation of smoothened signaling pathway // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016573 // histone acetylation // inferred from direct assay /// 0016573 // histone acetylation // inferred from electronic annotation /// 0018076 // N-terminal peptidyl-lysine acetylation // inferred from direct assay /// 0030718 // germ-line stem cell maintenance // inferred from electronic annotation /// 0033261 // regulation of S phase // inferred from electronic annotation /// 0042592 // homeostatic process // non-traceable author statement /// 0042733 // embryonic digit morphogenesis // traceable author statement /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0000123 // histone acetyltransferase complex // inferred from electronic annotation /// 0000790 // nuclear chromatin // inferred from direct assay /// 0000940 // condensed chromosome outer kinetochore // inferred from electronic annotation /// 0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0016604 // nuclear body // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation","0000987 // core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0001078 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription // inferred from direct assay /// 0001085 // RNA polymerase II transcription factor binding // inferred from physical interaction /// 0001102 // RNA polymerase II activating transcription factor binding // traceable author statement /// 0001105 // RNA polymerase II transcription coactivator activity // traceable author statement /// 0001191 // RNA polymerase II transcription factor binding transcription factor activity involved in negative regulation of transcription // inferred from direct assay /// 0002039 // p53 binding // inferred from physical interaction /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003712 // transcription cofactor activity // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from physical interaction /// 0003713 // transcription coactivator activity // traceable author statement /// 0004402 // histone acetyltransferase activity // inferred from direct assay /// 0004402 // histone acetyltransferase activity // inferred from electronic annotation /// 0004871 // signal transducer activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016407 // acetyltransferase activity // inferred from direct assay /// 0016407 // acetyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0042975 // peroxisome proliferator activated receptor binding // inferred from electronic annotation /// 0043426 // MRF binding // inferred from direct assay /// 0046332 // SMAD binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:3776568-3930711 (-) // 96.55 // p13.3"]
["11734372_at",-0.04451704,0.10137701,-0.06508303,0.078608036,-0.19067526,0.04451704,0.9511379,0.852234,1.0138018,0.01977565,1.0138018,"up","MBLAC1",255374.0,"","","0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:99724319-99726123 (+) // 90.38 // q22.1"]
["11749484_a_at",-0.08449817,-0.14366508,0.10734987,0.21220636,-0.027201653,0.027201653,0.70698994,0.3493546,-1.0799814,-0.11100653,1.0799814,"down","AXDND1",126859.0,"","","","chr1:179334875-179460786 (+) // 94.59 // q25.2"]
["11726396_x_at",0.08564448,0.019038677,-0.04414296,-0.016939163,-0.15145397,0.016939163,0.6924087,0.3289975,1.0502005,0.07066473,1.0502005,"up","KAL1",3730.0,"0006928 // cellular component movement // traceable author statement /// 0006935 // chemotaxis // traceable author statement /// 0006935 // chemotaxis // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0010466 // negative regulation of peptidase activity // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // traceable author statement /// 0005615 // extracellular space // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0005201 // extracellular matrix structural constituent // traceable author statement /// 0008201 // heparin binding // inferred from electronic annotation /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation","chrX:8496915-8700228 (-) // 92.89 // p22.31"]
["11730793_a_at",0.040476084,-0.1500082,0.011072874,-0.009304047,0.009304047,-0.018945694,0.88383573,0.6804419,-1.0185413,-0.026504532,1.0185413,"down","MRPL4",51073.0,"0006412 // translation // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005840 // ribosome // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003735 // structural constituent of ribosome // inferred from electronic annotation","chr19:10362635-10370733 (+) // 78.28 // p13.2"]
["11720741_a_at",0.018611908,-0.09059334,0.03961277,0.022686481,-0.018612385,-0.20871401,0.80962247,0.52181476,1.0406059,0.057423797,1.0406059,"up","ZNF605",1.00289635E8,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:133497860-133532892 (-) // 66.82 // q24.33"]
["11762500_at",-0.29178286,0.0049991608,-0.004999399,-0.07149148,0.022635937,0.0867126,0.7165076,0.36491916,-1.0791385,-0.10988006,1.0791385,"down","WWC1",23286.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016477 // cell migration // inferred from direct assay /// 0035329 // hippo signaling cascade // traceable author statement /// 0035330 // regulation of hippo signaling cascade // inferred from mutant phenotype /// 0043410 // positive regulation of MAPK cascade // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from direct assay /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0003713 // transcription coactivator activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction","chr5:167841076-167843527 (+) // 66.93 // q34"]
["11756966_a_at",-0.25224423,-0.05001688,0.06564903,0.03807926,0.0258286,-0.025828838,0.7322786,0.38942647,-1.0655245,-0.09156371,1.0655245,"down","FAM194A",131831.0,"","","","chr3:150377676-150400106 (-) // 73.93 // q25.1"]
["11722595_a_at",-0.002445221,-0.013879776,-0.0069847107,0.03027153,0.0426836,0.002445221,0.37594876,0.05616969,-1.0230689,-0.032903314,1.0230689,"down","AKAP13",11214.0,"0006915 // apoptotic process // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005624 // membrane fraction // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0004691 // cAMP-dependent protein kinase activity // non-traceable author statement /// 0004871 // signal transducer activity // traceable author statement /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr15:85923832-86292586 (+) // 98.27 // q25.3"]
["11742364_at",-0.069509506,0.018304348,-0.2621417,0.027149677,-0.018304348,0.10429001,0.5760059,0.1902178,-1.1035566,-0.14216067,1.1035566,"down","OR5AR1",219493.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr11:56431137-56432163 (+) // 100.0 // q12.1"]
["11718080_a_at",0.11702156,-0.02792406,-0.15286255,0.027923584,-0.03616333,0.066533566,0.870596,0.6516976,-1.028603,-0.040686205,1.028603,"down","BCL2L11",10018.0,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0001776 // leukocyte homeostasis // inferred from electronic annotation /// 0001782 // B cell homeostasis // inferred from electronic annotation /// 0001783 // B cell apoptotic process // inferred from electronic annotation /// 0001822 // kidney development // inferred from electronic annotation /// 0002260 // lymphocyte homeostasis // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from direct assay /// 0006917 // induction of apoptosis // traceable author statement /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0007160 // cell-matrix adhesion // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0008584 // male gonad development // inferred from electronic annotation /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0008629 // induction of apoptosis by intracellular signals // traceable author statement /// 0008633 // activation of pro-apoptotic gene products // traceable author statement /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0030879 // mammary gland development // inferred from electronic annotation /// 0032464 // positive regulation of protein homooligomerization // inferred from direct assay /// 0035148 // tube formation // inferred from electronic annotation /// 0042475 // odontogenesis of dentin-containing tooth // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043029 // T cell homeostasis // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043525 // positive regulation of neuron apoptotic process // inferred from electronic annotation /// 0043583 // ear development // inferred from electronic annotation /// 0045787 // positive regulation of cell cycle // inferred from electronic annotation /// 0046620 // regulation of organ growth // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048066 // developmental pigmentation // inferred from electronic annotation /// 0048070 // regulation of developmental pigmentation // inferred from electronic annotation /// 0048536 // spleen development // inferred from electronic annotation /// 0048538 // thymus development // inferred from electronic annotation /// 0048563 // post-embryonic organ morphogenesis // inferred from electronic annotation /// 0060154 // cellular process regulating host cell cycle in response to virus // inferred from electronic annotation /// 0090200 // positive regulation of release of cytochrome c from mitochondria // inferred from genetic interaction /// 0090200 // positive regulation of release of cytochrome c from mitochondria // inferred from mutant phenotype /// 2001244 // positive regulation of intrinsic apoptotic signaling pathway // inferred from mutant phenotype","0000300 // peripheral to membrane of membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // traceable author statement /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005874 // microtubule // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation /// 0097140 // BIM-BCL-xl complex // inferred from direct assay /// 0097141 // BIM-BCL-2 complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // inferred from direct assay /// 0008017 // microtubule binding // inferred from electronic annotation","chr2:111878490-111926021 (+) // 97.66 // q13"]
["11728554_at",-0.0116791725,0.03179598,0.0116791725,0.07548237,-0.017894745,-0.022654057,0.9932431,0.97715527,-1.0007252,-0.0010457913,1.0007252,"down","ATP6V1E2 /// FLJ41757","440862 /// 90423","0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0015991 // ATP hydrolysis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport // inferred from electronic annotation /// 0033572 // transferrin transport // traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0001669 // acrosomal vesicle // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0033178 // proton-transporting two-sector ATPase complex, catalytic domain // inferred from electronic annotation","0008553 // hydrogen-exporting ATPase activity, phosphorylative mechanism // inferred from electronic annotation /// 0046961 // proton-transporting ATPase activity, rotational mechanism // inferred from electronic annotation","chr2:46738985-46747176 (-) // 68.68 // p21"]
["11737957_a_at",-0.0911684,0.09458494,-0.18608284,-0.051813602,0.051813602,0.09458494,0.72454566,0.37743428,-1.066155,-0.092417136,1.066155,"down","DUSP15",128853.0,"0006470 // protein dephosphorylation // not recorded /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008138 // protein tyrosine/serine/threonine phosphatase activity // not recorded /// 0008138 // protein tyrosine/serine/threonine phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation","chr20:30448879-30458547 (-) // 96.85 // q11.21"]
["11721231_a_at",-0.20126438,-0.08713722,-0.30788326,0.120595455,0.09359646,0.08713722,0.19540504,0.009771241,-1.2304659,-0.29920465,1.2304659,"down","METTL21D",79609.0,"0032259 // methylation // inferred from electronic annotation","","0008168 // methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr14:50575354-50583318 (-) // 98.2 // q21.3"]
["11755527_x_at",-0.019098759,-0.006170273,0.006170273,0.017466068,-0.031838417,0.084040165,0.7629728,0.43769827,-1.0207212,-0.029588858,1.0207212,"down","PRPSAP2",5636.0,"0006139 // nucleobase-containing compound metabolic process // traceable author statement /// 0009165 // nucleotide biosynthetic process // inferred from electronic annotation /// 0043086 // negative regulation of catalytic activity // traceable author statement","0043234 // protein complex // inferred from electronic annotation","0000287 // magnesium ion binding // inferred from electronic annotation /// 0004749 // ribose phosphate diphosphokinase activity // inferred from electronic annotation /// 0004857 // enzyme inhibitor activity // traceable author statement","chr17:18759611-18834524 (+) // 95.54 // p11.2"]
["11729333_at",-0.09714842,0.12040329,-0.3511901,0.09393549,-0.09393549,0.23167849,0.6881112,0.3233884,-1.1380295,-0.18653789,1.1380295,"down","PADI1",29943.0,"0006464 // cellular protein modification process // inferred from electronic annotation /// 0018101 // peptidyl-citrulline biosynthetic process from peptidyl-arginine // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0004668 // protein-arginine deiminase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr1:17531289-17572502 (+) // 99.31 // p36.13"]
["11763951_at",0.16055441,-0.0031785965,-0.13377237,-0.11102486,0.049804688,0.0031785965,0.93106043,0.79425234,1.0190431,0.027215054,1.0190431,"up","LINC00235",64493.0,"","","","chr16:576846-577407 (+) // 100.0 // p13.3"]
["11726044_a_at",0.27376747,0.0,-0.15994835,0.09519243,0.0,-0.03949833,0.964301,0.89105356,1.0135204,0.01937507,1.0135204,"up","AGER",177.0,"0006954 // inflammatory response // inferred from electronic annotation /// 0006954 // inflammatory response // traceable author statement /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0007259 // JAK-STAT cascade // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0009611 // response to wounding // traceable author statement /// 0010763 // positive regulation of fibroblast migration // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from genetic interaction /// 0031175 // neuron projection development // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from electronic annotation /// 0050729 // positive regulation of inflammatory response // inferred from electronic annotation /// 0050930 // induction of positive chemotaxis // inferred from electronic annotation /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0055074 // calcium ion homeostasis // inferred from electronic annotation /// 0055093 // response to hyperoxia // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // non-traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0009925 // basal plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004872 // receptor activity // traceable author statement /// 0004888 // transmembrane signaling receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0044548 // S100 protein binding // inferred from physical interaction /// 0050785 // advanced glycation end-product receptor activity // inferred from electronic annotation","chr6:32148746-32152517 (-) // 88.71 // p21.32"]
["11752814_s_at",-0.018935204,0.03002739,0.08605242,-0.01030159,0.010301113,-0.038292885,0.6302362,0.24833055,1.0317876,0.04514606,1.0317876,"up","TNFRSF1A",7132.0,"0001666 // response to hypoxia // inferred from electronic annotation /// 0006693 // prostaglandin metabolic process // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006952 // defense response // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from sequence or structural similarity /// 0006954 // inflammatory response // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0009611 // response to wounding // inferred from electronic annotation /// 0009812 // flavonoid metabolic process // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0010629 // negative regulation of gene expression // inferred from electronic annotation /// 0016101 // diterpenoid metabolic process // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // inferred from sequence or structural similarity /// 0019221 // cytokine-mediated signaling pathway // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0032715 // negative regulation of interleukin-6 production // inferred from electronic annotation /// 0032760 // positive regulation of tumor necrosis factor production // inferred from electronic annotation /// 0033013 // tetrapyrrole metabolic process // inferred from electronic annotation /// 0033160 // positive regulation of protein import into nucleus, translocation // inferred from electronic annotation /// 0033209 // tumor necrosis factor-mediated signaling pathway // traceable author statement /// 0033209 // tumor necrosis factor-mediated signaling pathway // inferred from electronic annotation /// 0042511 // positive regulation of tyrosine phosphorylation of Stat1 protein // inferred from mutant phenotype /// 0042742 // defense response to bacterium // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from expression pattern /// 0043200 // response to amino acid stimulus // inferred from electronic annotation /// 0043279 // response to alkaloid // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045471 // response to ethanol // inferred from electronic annotation /// 0045766 // positive regulation of angiogenesis // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0050728 // negative regulation of inflammatory response // inferred from mutant phenotype /// 0050729 // positive regulation of inflammatory response // inferred from sequence or structural similarity /// 0050729 // positive regulation of inflammatory response // inferred from electronic annotation /// 0071260 // cellular response to mechanical stimulus // inferred from expression pattern /// 0071392 // cellular response to estradiol stimulus // inferred from electronic annotation","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0045121 // membrane raft // inferred from direct assay /// 0045121 // membrane raft // inferred from electronic annotation","0002020 // protease binding // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005031 // tumor necrosis factor-activated receptor activity // traceable author statement /// 0005031 // tumor necrosis factor-activated receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0043120 // tumor necrosis factor binding // inferred from electronic annotation","chr12:6438310-6451170 (-) // 91.84 // p13.31"]
["11734315_a_at",-0.060310602,-0.028251886,0.080350876,0.0898726,-0.011306524,0.011306524,0.8321909,0.5668782,-1.022921,-0.032694682,1.022921,"down","KIAA1456",57604.0,"0008152 // metabolic process // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation","","0008168 // methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr8:12803182-12887286 (+) // 80.04 // p22"]
["11733572_at",0.19434619,0.091846466,-0.119790554,-0.038108826,-0.04431963,0.038108826,0.80068046,0.50580895,1.0498917,0.07024053,1.0498917,"up","DMRT3",58524.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007548 // sex differentiation // non-traceable author statement /// 0007548 // sex differentiation // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:976963-991732 (+) // 94.19 // p24.3"]
["11716953_at",0.002708435,0.005414009,-0.016513824,-0.02147293,-0.002708435,0.019462585,0.97951907,0.9330792,-1.0008489,-0.0012241689,1.0008489,"down","TMEM126A",84233.0,"0021554 // optic nerve development // inferred from mutant phenotype","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr11:85358962-85367586 (+) // 93.94 // q14.1"]
["11717321_at",-0.09500265,0.0059957504,-0.19713116,0.1275487,-0.0059957504,0.006571293,0.50349253,0.12940115,-1.1004453,-0.13808739,1.1004453,"down","OAF",220323.0,"","","","chr11:120081474-120101039 (+) // 87.07 // q23.3"]
["11760525_at",0.091986656,0.026779175,0.24959373,-0.049520493,-0.033061028,-0.026779175,0.416024,0.07475198,1.1166987,0.15924004,1.1166987,"up","","","","","","chr3:99651964-99654108 (+) // 70.88 // q12.1"]
["11755164_a_at",-0.064121485,0.19255781,-0.045825243,0.2098105,0.035975218,-0.03597498,0.90055394,0.7201573,-1.0298254,-0.042399827,1.0298254,"down","LEFTY1",10637.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0003007 // heart morphogenesis // inferred from sequence or structural similarity /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007368 // determination of left/right symmetry // inferred from sequence or structural similarity /// 0016049 // cell growth // inferred from electronic annotation /// 0040007 // growth // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation","0005125 // cytokine activity // inferred from electronic annotation /// 0005160 // transforming growth factor beta receptor binding // inferred from electronic annotation /// 0008083 // growth factor activity // inferred from electronic annotation","chr1:226073981-226076846 (-) // 98.3 // q42.12"]
["11741841_a_at",-0.044032335,0.018727541,0.09358263,0.027469158,-0.047880173,-0.018727541,0.7856956,0.47464636,1.025129,0.03580541,1.025129,"up","C10orf71",118461.0,"","","","chr10:50507186-50535537 (+) // 98.12 // q11.23"]
["11735679_a_at",-0.0012273788,-0.055916786,0.001226902,0.010318279,-0.06759167,0.084548,0.84387493,0.5923328,-1.0194073,-0.02773055,1.0194073,"down","ACOT8",10005.0,"0006637 // acyl-CoA metabolic process // inferred from electronic annotation /// 0006699 // bile acid biosynthetic process // traceable author statement /// 0007031 // peroxisome organization // inferred from electronic annotation /// 0008206 // bile acid metabolic process // traceable author statement /// 0033540 // fatty acid beta-oxidation using acyl-CoA oxidase // traceable author statement /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005777 // peroxisome // inferred from electronic annotation /// 0005782 // peroxisomal matrix // inferred from direct assay /// 0005782 // peroxisomal matrix // inferred from mutant phenotype /// 0005782 // peroxisomal matrix // traceable author statement","0004091 // carboxylesterase activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0033882 // choloyl-CoA hydrolase activity // inferred from electronic annotation /// 0047617 // acyl-CoA hydrolase activity // inferred from direct assay /// 0047617 // acyl-CoA hydrolase activity // inferred from electronic annotation","chr20:44470360-44486035 (-) // 100.0 // q13.12"]
["11742545_at",-0.020581007,-0.21044254,-0.024986029,0.22083426,0.08514714,0.020581007,0.43653503,0.08688094,-1.1440822,-0.1941907,1.1440822,"down","OR5R1",219479.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr11:56184733-56185708 (-) // 100.0 // q12.1"]
["11761549_at",-0.08802414,0.08706379,0.104920864,0.06779528,-0.06779528,-0.0812664,0.78392637,0.47191685,1.0437255,0.06174232,1.0437255,"up","TMED3",23423.0,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030126 // COPI vesicle coat // inferred from sequence or structural similarity /// 0030663 // COPI coated vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation /// 0033116 // endoplasmic reticulum-Golgi intermediate compartment membrane // inferred from electronic annotation","","chr15:79603486-79606347 (+) // 46.02 // q25.1"]
["11723885_at",-0.02158618,0.25311136,-0.09439683,-0.07847619,0.021586418,0.06955719,0.907428,0.73531157,1.0291741,0.04148704,1.0291741,"up","C17orf103",256302.0,"","","","chr17:21142182-21156722 (-) // 82.25 // p11.2"]
["11729457_a_at",-0.113024,0.20364475,-0.032289267,-0.066568375,0.03228903,0.077907085,0.989336,0.96471614,1.0034031,0.0049012536,1.0034031,"up","BCL6B",255877.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:6926338-6932961 (+) // 97.69 // p13.1"]
["11733224_at",0.14650631,-0.06286144,0.025868893,-0.025868893,-0.07665634,0.19115353,0.98502016,0.94891274,1.0048373,0.0069618872,1.0048373,"up","ZNF71",58491.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:57106647-57135790 (+) // 88.57 // q13.43"]
["11734383_a_at",0.03836584,0.0540452,0.0040769577,-0.0040769577,-0.13799286,-0.060471058,0.41528413,0.07433694,1.071533,0.09967623,1.071533,"up","AQP10",89872.0,"0006810 // transport // inferred from electronic annotation /// 0006833 // water transport // traceable author statement /// 0006833 // water transport // inferred from electronic annotation /// 0009636 // response to toxin // inferred from direct assay /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation","chr1:154293568-154297801 (+) // 99.29 // q21.3"]
["11743466_at",0.005997658,-0.0024671555,0.04455757,-0.011387825,0.0024671555,-0.02845192,0.55337703,0.16932912,1.0199418,0.02848684,1.0199418,"up","MPHOSPH6",10200.0,"0000087 // M phase of mitotic cell cycle // traceable author statement /// 0000460 // maturation of 5.8S rRNA // inferred from mutant phenotype /// 0006364 // rRNA processing // inferred from electronic annotation","0000176 // nuclear exosome (RNase complex) // traceable author statement /// 0000178 // exosome (RNase complex) // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr16:82181766-82203831 (-) // 96.08 // q23.3"]
["11748500_a_at",0.03202772,-0.026303053,-0.063642025,-0.026374817,0.026302814,0.031373024,0.75528747,0.42361543,-1.0208278,-0.02973948,1.0208278,"down","ENPP5",59084.0,"0007154 // cell communication // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr6:46128730-46138708 (-) // 95.89 // p21.1"]
["11737939_a_at",0.008996487,-0.0089969635,-0.010695457,0.07943964,-0.013551712,0.12660313,0.5641903,0.17927092,-1.0480655,-0.067728944,1.0480655,"down","RIPK1",8737.0,"0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from direct assay /// 0006915 // apoptotic process // traceable author statement /// 0006917 // induction of apoptosis // inferred from mutant phenotype /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007257 // activation of JUN kinase activity // traceable author statement /// 0008063 // Toll signaling pathway // traceable author statement /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0008633 // activation of pro-apoptotic gene products // traceable author statement /// 0010940 // positive regulation of necrotic cell death // inferred from mutant phenotype /// 0016310 // phosphorylation // inferred from electronic annotation /// 0032481 // positive regulation of type I interferon production // traceable author statement /// 0032757 // positive regulation of interleukin-8 production // inferred from direct assay /// 0032760 // positive regulation of tumor necrosis factor production // inferred from direct assay /// 0033209 // tumor necrosis factor-mediated signaling pathway // inferred by curator /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0034612 // response to tumor necrosis factor // inferred from mutant phenotype /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0042327 // positive regulation of phosphorylation // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0043068 // positive regulation of programmed cell death // inferred from mutant phenotype /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from expression pattern /// 0045087 // innate immune response // traceable author statement /// 0045768 // positive regulation of anti-apoptosis // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from mutant phenotype /// 0060545 // positive regulation of necroptosis // inferred from mutant phenotype /// 0060555 // induction of necroptosis by extracellular signals // inferred from mutant phenotype /// 0070926 // regulation of ATP:ADP antiporter activity // inferred from mutant phenotype /// 2000379 // positive regulation of reactive oxygen species metabolic process // traceable author statement /// 2001237 // negative regulation of extrinsic apoptotic signaling pathway // inferred from mutant phenotype /// 2001238 // positive regulation of extrinsic apoptotic signaling pathway // inferred from mutant phenotype /// 2001243 // negative regulation of intrinsic apoptotic signaling pathway // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0010008 // endosome membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0031264 // death-inducing signaling complex // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation /// 0043235 // receptor complex // inferred from direct assay /// 0045121 // membrane raft // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005123 // death receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0070513 // death domain binding // inferred from physical interaction","chr6:3064121-3115421 (+) // 87.6 // p25.2"]
["11736630_at",0.055541515,0.010922909,-0.056447506,-0.010922909,-0.23015165,0.1294446,0.90485907,0.73011565,1.0285051,0.040548928,1.0285051,"up","BTBD17",388419.0,"","0005576 // extracellular region // inferred from electronic annotation","","chr17:72352554-72357958 (-) // 99.88 // q25.1"]
["11759163_at",-0.15245843,0.022414923,0.08913541,0.1412859,-0.022415161,-0.26578975,0.9371797,0.8111586,1.0247961,0.03533693,1.0247961,"up","CDH23 /// LOC100653137","100653137 /// 64072","0006816 // calcium ion transport // inferred from mutant phenotype /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from electronic annotation /// 0007601 // visual perception // inferred from electronic annotation /// 0007605 // sensory perception of sound // inferred from mutant phenotype /// 0007605 // sensory perception of sound // inferred from electronic annotation /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0016339 // calcium-dependent cell-cell adhesion // non-traceable author statement /// 0042472 // inner ear morphogenesis // inferred from electronic annotation /// 0042491 // auditory receptor cell differentiation // inferred from electronic annotation /// 0045494 // photoreceptor cell maintenance // inferred from mutant phenotype /// 0048563 // post-embryonic organ morphogenesis // inferred from electronic annotation /// 0048839 // inner ear development // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050953 // sensory perception of light stimulus // inferred from mutant phenotype /// 0050953 // sensory perception of light stimulus // inferred from electronic annotation /// 0050957 // equilibrioception // inferred from mutant phenotype /// 0051480 // cytosolic calcium ion homeostasis // inferred from mutant phenotype /// 0060088 // auditory receptor cell stereocilium organization // inferred from electronic annotation","0001917 // photoreceptor inner segment // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0005932 // microtubule basal body // inferred from electronic annotation /// 0016020 // membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0032420 // stereocilium // inferred from sequence or structural similarity /// 0032420 // stereocilium // inferred from electronic annotation /// 0032426 // stereocilium bundle tip // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr10:73156690-73407219 (+) // 84.54 // q22.1"]
["11724145_a_at",-0.111177444,-0.015211105,0.039268017,-0.07708979,0.015211105,0.10145807,0.8321909,0.5668869,-1.0297066,-0.042233318,1.0297066,"down","SLC37A1",54020.0,"0006810 // transport // inferred from electronic annotation /// 0008643 // carbohydrate transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation","chr21:43919738-44001536 (+) // 96.15 // q22.3"]
["11738915_x_at",-0.008487463,0.09134078,0.008487225,-0.03066516,0.079683304,-0.06914353,0.81428593,0.5308558,1.0260886,0.0371553,1.0260886,"up","CD200R1",131450.0,"0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0050776 // regulation of immune response // traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr3:112647764-112693937 (-) // 100.0 // q13.2"]
["11750788_a_at",0.056322575,0.069826126,0.092577934,-0.10616636,-0.077404976,-0.056322575,0.09110642,0.001032762,1.1117817,0.15287356,1.1117817,"up","CSNK1G1",53944.0,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr15:64457935-64665968 (-) // 100.0 // q22.31"]
["11761080_at",-0.118462086,0.062084436,0.033841133,-0.033841133,-0.16643262,0.15623116,0.98535264,0.950782,1.0049813,0.0071686273,1.0049813,"up","SGSH",6448.0,"0006029 // proteoglycan metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation","0005764 // lysosome // inferred from electronic annotation","0003824 // catalytic activity // traceable author statement /// 0003824 // catalytic activity // inferred from electronic annotation /// 0008484 // sulfuric ester hydrolase activity // inferred from electronic annotation /// 0016250 // N-sulfoglucosamine sulfohydrolase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:78184362-78194137 (-) // 83.41 // q25.3"]
["11734519_x_at",0.20227027,-0.098152876,-0.040524006,0.040524006,0.23621655,-0.11735749,0.94290835,0.82787716,-1.0223788,-0.03192983,1.0223788,"down","PAGE2",203569.0,"","","","chrX:55115440-55119269 (+) // 97.5 // p11.21"]
["11755661_a_at",-0.030643225,-0.020379782,0.11054611,-0.09498024,0.096232176,0.02038002,0.95727134,0.86891824,1.0087931,0.012630335,1.0087931,"up","KCNMA1",3778.0,"0001666 // response to hypoxia // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006813 // potassium ion transport // inferred from direct assay /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0006970 // response to osmotic stress // inferred from direct assay /// 0007268 // synaptic transmission // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0030007 // cellular potassium ion homeostasis // inferred from direct assay /// 0034465 // response to carbon monoxide // inferred from direct assay /// 0034465 // response to carbon monoxide // inferred from mutant phenotype /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0042391 // regulation of membrane potential // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0045794 // negative regulation of cell volume // inferred from direct assay /// 0051592 // response to calcium ion // inferred from direct assay /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0060073 // micturition // inferred from direct assay /// 0060083 // smooth muscle contraction involved in micturition // inferred from direct assay /// 0071805 // potassium ion transmembrane transport // not recorded /// 0071805 // potassium ion transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005901 // caveola // inferred from direct assay /// 0008076 // voltage-gated potassium channel complex // inferred from direct assay /// 0008076 // voltage-gated potassium channel complex // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003779 // actin binding // inferred from direct assay /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005249 // voltage-gated potassium channel activity // inferred from direct assay /// 0005249 // voltage-gated potassium channel activity // inferred from electronic annotation /// 0005267 // potassium channel activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0015269 // calcium-activated potassium channel activity // inferred from direct assay /// 0015269 // calcium-activated potassium channel activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0060072 // large conductance calcium-activated potassium channel activity // inferred from direct assay /// 0060072 // large conductance calcium-activated potassium channel activity // inferred from mutant phenotype /// 0060072 // large conductance calcium-activated potassium channel activity // inferred from electronic annotation","chr10:78637357-78943237 (-) // 98.39 // q22.3"]
["11716025_a_at",-0.022631645,-0.05205345,0.05316162,0.022631645,-0.06456661,0.07338333,0.91186255,0.7468061,-1.0123143,-0.01765731,1.0123143,"down","GOLGA7",51125.0,"","0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","","chr8:41348134-41368499 (+) // 96.01 // p11.21"]
["11726963_s_at",-0.05030489,0.016038418,0.20548153,-0.032639503,-0.0052218437,0.005221367,0.7588418,0.42990115,1.0482273,0.067951605,1.0482273,"up","SGTB",54557.0,"","","","chr5:64961756-65017940 (-) // 70.79 // q12.3"]
["11732950_a_at",0.25617743,-0.017331123,0.051246166,-0.034546852,0.009331703,-0.009331703,0.6415432,0.26295447,1.0778923,0.10821304,1.0778923,"up","AHI1",54806.0,"0001738 // morphogenesis of a polarized epithelium // inferred from sequence or structural similarity /// 0001947 // heart looping // inferred from sequence or structural similarity /// 0002092 // positive regulation of receptor internalization // inferred from sequence or structural similarity /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from sequence or structural similarity /// 0007417 // central nervous system development // inferred from sequence or structural similarity /// 0010842 // retina layer formation // inferred from sequence or structural similarity /// 0016192 // vesicle-mediated transport // inferred from sequence or structural similarity /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0030030 // cell projection organization // inferred from electronic annotation /// 0030862 // positive regulation of polarized epithelial cell differentiation // inferred from sequence or structural similarity /// 0030902 // hindbrain development // inferred from sequence or structural similarity /// 0033365 // protein localization to organelle // inferred from electronic annotation /// 0034613 // cellular protein localization // inferred from sequence or structural similarity /// 0035844 // cloaca development // inferred from sequence or structural similarity /// 0035845 // photoreceptor cell outer segment organization // inferred from sequence or structural similarity /// 0039008 // pronephric nephron tubule morphogenesis // inferred from sequence or structural similarity /// 0039023 // pronephric duct morphogenesis // inferred from sequence or structural similarity /// 0042384 // cilium assembly // inferred from sequence or structural similarity /// 0043066 // negative regulation of apoptotic process // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0050795 // regulation of behavior // inferred from sequence or structural similarity /// 0060271 // cilium morphogenesis // inferred from sequence or structural similarity /// 0060271 // cilium morphogenesis // inferred from electronic annotation /// 0065001 // specification of axis polarity // inferred from sequence or structural similarity /// 0070121 // Kupffer's vesicle development // inferred from sequence or structural similarity /// 0070986 // left/right axis specification // inferred from sequence or structural similarity /// 0071599 // otic vesicle development // inferred from sequence or structural similarity","0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005814 // centriole // inferred from sequence or structural similarity /// 0005814 // centriole // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from direct assay /// 0005912 // adherens junction // inferred from direct assay /// 0005912 // adherens junction // inferred from electronic annotation /// 0005929 // cilium // inferred from sequence or structural similarity /// 0005929 // cilium // inferred from electronic annotation /// 0005932 // microtubule basal body // inferred from direct assay /// 0005932 // microtubule basal body // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0031513 // nonmotile primary cilium // inferred from sequence or structural similarity /// 0031513 // nonmotile primary cilium // inferred from electronic annotation /// 0036038 // TCTN-B9D complex // inferred from sequence or structural similarity /// 0042995 // cell projection // inferred from electronic annotation /// 0072372 // primary cilium // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr6:135708922-135818903 (-) // 96.46 // q23.3"]
["11732983_a_at",-0.029096127,0.08054972,-0.008293152,0.008293152,-0.0838871,0.07429218,0.9359113,0.8072717,1.0103259,0.014820749,1.0103259,"up","TMEM8B",51754.0,"0007155 // cell adhesion // inferred from electronic annotation /// 0007160 // cell-matrix adhesion // inferred from mutant phenotype /// 0007346 // regulation of mitotic cell cycle // traceable author statement /// 0040008 // regulation of growth // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr9:35829221-35847231 (+) // 92.96 // p13.3"]
["11757958_s_at",0.018600464,-0.018600464,-0.077970505,0.03214836,-0.058065414,0.029684067,0.8196787,0.5415632,-1.0190648,-0.02724577,1.0190648,"down","POGZ",23126.0,"0007049 // cell cycle // inferred from electronic annotation /// 0007064 // mitotic sister chromatid cohesion // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation /// 0051382 // kinetochore assembly // inferred from mutant phenotype","0000790 // nuclear chromatin // inferred from direct assay /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:151375199-151375546 (-) // 98.86 // q21.3"]
["11760936_at",0.09803033,-0.08787656,-0.0015482903,0.07686305,-0.1394794,0.0015482903,0.93080163,0.79373,1.0162283,0.023224572,1.0162283,"up","CMTM5",116173.0,"0006935 // chemotaxis // inferred from electronic annotation","0005615 // extracellular space // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005125 // cytokine activity // inferred from electronic annotation","chr14:23846251-23848607 (+) // 96.17 // q11.2"]
["11721451_a_at",0.014917374,0.015900612,0.096541405,-0.058722496,-0.036859512,-0.014917374,0.37705383,0.056647766,1.0564952,0.079286195,1.0564952,"up","ETF1",2107.0,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // inferred from electronic annotation /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006415 // translational termination // traceable author statement /// 0006415 // translational termination // inferred from electronic annotation /// 0006449 // regulation of translational termination // traceable author statement /// 0006479 // protein methylation // inferred from direct assay /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement","0003723 // RNA binding // traceable author statement /// 0003747 // translation release factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008079 // translation termination factor activity // traceable author statement /// 0016149 // translation release factor activity, codon specific // inferred from electronic annotation /// 0043022 // ribosome binding // traceable author statement","chr5:137841783-137878989 (-) // 97.35 // q31.2"]
["11753864_x_at",-0.029453754,-0.0061001778,0.05469942,-0.052977085,0.05286932,0.0061001778,0.9741136,0.91714185,1.0030437,0.004384392,1.0030437,"up","PAX5",5079.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0002053 // positive regulation of mesenchymal cell proliferation // inferred from electronic annotation /// 0002329 // pre-B cell differentiation // inferred from electronic annotation /// 0002639 // positive regulation of immunoglobulin production // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006959 // humoral immune response // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007275 // multicellular organismal development // traceable author statement /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0007519 // skeletal muscle tissue development // inferred from electronic annotation /// 0008045 // motor axon guidance // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0009887 // organ morphogenesis // traceable author statement /// 0021517 // ventral spinal cord development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0033152 // immunoglobulin V(D)J recombination // inferred from electronic annotation /// 0045214 // sarcomere organization // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048745 // smooth muscle tissue development // inferred from electronic annotation /// 0050679 // positive regulation of epithelial cell proliferation // inferred from electronic annotation /// 0051573 // negative regulation of histone H3-K9 methylation // inferred from electronic annotation /// 0055007 // cardiac muscle cell differentiation // inferred from electronic annotation /// 0060043 // regulation of cardiac muscle cell proliferation // inferred from electronic annotation /// 0072358 // cardiovascular system development // inferred from electronic annotation /// 2000727 // positive regulation of cardiac muscle cell differentiation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr9:37002658-37026572 (-) // 100.0 // p13.2"]
["11761545_x_at",0.003809452,0.011077642,-0.003809452,-0.15070081,0.087118864,-0.13581324,0.7484818,0.41394278,1.0498314,0.07015764,1.0498314,"up","FAM216A",29902.0,"","","","chr12:110906223-110925103 (+) // 63.1 // q24.11"]
["11716544_at",-0.048559666,-0.031269073,0.011212349,-0.011212349,0.023599625,0.124174595,0.5839125,0.19754417,-1.0485479,-0.06839272,1.0485479,"down","TNNI1",7135.0,"0006937 // regulation of muscle contraction // inferred from electronic annotation /// 0006942 // regulation of striated muscle contraction // non-traceable author statement /// 0030049 // muscle filament sliding // traceable author statement /// 0055010 // ventricular cardiac muscle tissue morphogenesis // inferred from electronic annotation","0005829 // cytosol // traceable author statement /// 0005861 // troponin complex // non-traceable author statement /// 0005861 // troponin complex // inferred from electronic annotation","0003779 // actin binding // non-traceable author statement /// 0003779 // actin binding // inferred from electronic annotation /// 0005523 // tropomyosin binding // non-traceable author statement","chr1:201372433-201391295 (-) // 74.1 // q32.1"]
["11741617_a_at",-0.11897898,0.02103138,-0.20991182,0.10584974,0.08272934,-0.021031857,0.4770504,0.11093027,-1.116102,-0.15846886,1.116102,"down","GPRIN3",285513.0,"","","","chr4:90165428-90229370 (-) // 99.1 // q22.1"]
["11750263_x_at",0.06887627,-0.0071730614,-0.09508419,0.0071730614,-0.15952682,0.13755512,0.9858563,0.9527131,-1.0043026,-0.006194054,1.0043026,"down","ZNF786",136051.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:148766732-148787810 (-) // 80.64 // q36.1"]
["11761443_a_at",0.0,-0.18380594,-0.11846399,0.06570768,0.0,0.055471897,0.4073147,0.07020016,-1.1027837,-0.14114982,1.1027837,"down","KALRN",8997.0,"0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007399 // nervous system development // inferred from sequence or structural similarity /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0016192 // vesicle-mediated transport // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from sequence or structural similarity /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // inferred from sequence or structural similarity /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0005085 // guanyl-nucleotide exchange factor activity // traceable author statement /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:124355943-124393805 (+) // 99.38 // q21.2"]
["11729751_a_at",0.08091855,-0.04100752,-0.09656048,-0.12912965,0.14330459,0.04100752,0.89883256,0.7152993,-1.0261754,-0.03727732,1.0261754,"down","LPAR1",1902.0,"0000187 // activation of MAPK activity // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007202 // activation of phospholipase C activity // traceable author statement /// 0007204 // elevation of cytosolic calcium ion concentration // traceable author statement /// 0010942 // positive regulation of cell death // inferred from electronic annotation /// 0010977 // negative regulation of neuron projection development // inferred from electronic annotation /// 0022008 // neurogenesis // inferred from electronic annotation /// 0032060 // bleb assembly // inferred from electronic annotation /// 0035025 // positive regulation of Rho protein signal transduction // inferred from electronic annotation /// 0042552 // myelination // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from expression pattern /// 0043410 // positive regulation of MAPK cascade // inferred from electronic annotation /// 0051482 // elevation of cytosolic calcium ion concentration involved in phospholipase C-activating G-protein coupled signaling pathway // inferred from electronic annotation /// 0060999 // positive regulation of dendritic spine development // inferred from electronic annotation /// 0071453 // cellular response to oxygen levels // inferred from electronic annotation /// 0071673 // positive regulation of smooth muscle cell chemotaxis // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030139 // endocytic vesicle // inferred from direct assay /// 0043197 // dendritic spine // inferred from electronic annotation /// 0043198 // dendritic shaft // inferred from electronic annotation","0001965 // G-protein alpha-subunit binding // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0030165 // PDZ domain binding // inferred from electronic annotation /// 0070915 // lysophosphatidic acid receptor activity // inferred from electronic annotation","chr9:113635541-113800441 (-) // 85.81 // q31.3"]
["11751133_a_at",0.019848347,-0.007918358,0.020763397,-0.048461437,0.007917881,-0.083462715,0.51579916,0.13798502,1.0368687,0.052233204,1.0368687,"up","ATP6V1B2",526.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0015991 // ATP hydrolysis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport // traceable author statement /// 0015992 // proton transport // inferred from electronic annotation /// 0033572 // transferrin transport // traceable author statement /// 0046034 // ATP metabolic process // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005902 // microvillus // inferred from electronic annotation /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016469 // proton-transporting two-sector ATPase complex // inferred from electronic annotation /// 0033178 // proton-transporting two-sector ATPase complex, catalytic domain // inferred from electronic annotation /// 0033180 // proton-transporting V-type ATPase, V1 domain // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0005524 // ATP binding // inferred from electronic annotation /// 0015078 // hydrogen ion transmembrane transporter activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016820 // hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances // inferred from electronic annotation /// 0046933 // hydrogen ion transporting ATP synthase activity, rotational mechanism // inferred from electronic annotation /// 0046961 // proton-transporting ATPase activity, rotational mechanism // inferred from electronic annotation /// 0046961 // proton-transporting ATPase activity, rotational mechanism // traceable author statement","chr8:20054905-20078289 (+) // 99.87 // p21.3"]
["11760779_a_at",-0.052200317,-0.012761593,0.09779501,0.109478,0.010626316,-0.0106265545,0.884803,0.68324333,-1.0178664,-0.025548175,1.0178664,"down","MMP19",4327.0,"0001525 // angiogenesis // inferred from electronic annotation /// 0001541 // ovarian follicle development // inferred from electronic annotation /// 0001542 // ovulation from ovarian follicle // inferred from electronic annotation /// 0001554 // luteolysis // inferred from electronic annotation /// 0006508 // proteolysis // non-traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009725 // response to hormone stimulus // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030574 // collagen catabolic process // inferred from electronic annotation /// 0051591 // response to cAMP // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // non-traceable author statement /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from electronic annotation","0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:56231912-56236724 (-) // 99.91 // q13.2"]
["11719155_a_at",-0.052435398,0.009427071,-0.20757341,0.10651493,-0.009427071,0.1785593,0.47025532,0.10694155,-1.129285,-0.1754096,1.129285,"down","DRAM1",55332.0,"0006914 // autophagy // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation","0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr12:102271104-102317401 (+) // 85.76 // q23.2"]
["11759350_at",0.07681942,-0.13877463,0.19629955,-0.046673775,0.046673775,-0.07789636,0.8172942,0.537174,1.0502603,0.07074694,1.0502603,"up","METTL20",254013.0,"0006479 // protein methylation // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0008168 // methyltransferase activity // inferred from electronic annotation /// 0008276 // protein methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr12:31812608-31826879 (+) // 51.89 // p11.21"]
["11739217_a_at",-0.05253935,-0.1528554,-0.10391283,0.15205383,0.052539825,0.24640656,0.23672597,0.01584463,-1.1920427,-0.2534359,1.1920427,"down","RSAD2",91543.0,"0001503 // ossification // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009615 // response to virus // inferred from direct assay /// 0009615 // response to virus // inferred from electronic annotation /// 0030278 // regulation of ossification // inferred from electronic annotation /// 0034157 // positive regulation of toll-like receptor 7 signaling pathway // inferred from sequence or structural similarity /// 0034165 // positive regulation of toll-like receptor 9 signaling pathway // inferred from sequence or structural similarity /// 0035710 // CD4-positive, alpha-beta T cell activation // inferred from sequence or structural similarity /// 0043367 // CD4-positive, alpha-beta T cell differentiation // inferred from sequence or structural similarity /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045071 // negative regulation of viral genome replication // inferred from direct assay /// 0050709 // negative regulation of protein secretion // inferred from direct assay /// 0051607 // defense response to virus // inferred from direct assay /// 0051607 // defense response to virus // inferred from electronic annotation /// 2000553 // positive regulation of T-helper 2 cell cytokine production // inferred from sequence or structural similarity","0005739 // mitochondrion // inferred from direct assay /// 0005741 // mitochondrial outer membrane // inferred from direct assay /// 0005743 // mitochondrial inner membrane // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005811 // lipid particle // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0043621 // protein self-association // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation /// 0051539 // 4 iron, 4 sulfur cluster binding // inferred from direct assay","chr2:7017774-7038937 (+) // 87.81 // p25.2"]
["11718370_a_at",-0.071815014,-0.1918354,-0.009753704,0.009753704,0.12864113,0.0488019,0.41475865,0.074066296,-1.1122905,-0.15353362,1.1122905,"down","NRBF2",29982.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0010467 // gene expression // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation","chr10:64893006-64914786 (+) // 96.84 // q21.3"]
["11749759_a_at",-0.1335175,-0.042062998,0.2109232,2.8848648E-5,0.20928669,-2.861023E-5,0.87713534,0.66542953,-1.0410082,-0.05798148,1.0410082,"down","SCN3A",6328.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // non-traceable author statement /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0035725 // sodium ion transmembrane transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0001518 // voltage-gated sodium channel complex // non-traceable author statement /// 0001518 // voltage-gated sodium channel complex // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005248 // voltage-gated sodium channel activity // non-traceable author statement /// 0005248 // voltage-gated sodium channel activity // inferred from electronic annotation /// 0005272 // sodium channel activity // inferred from electronic annotation","chr2:165946480-165950338 (-) // 94.65 // q24.3"]
["11722249_s_at",-0.07891703,0.105615616,-0.011003494,0.011003494,-0.051941395,0.07259941,0.98170614,0.9384666,-1.0036958,-0.005322149,1.0036958,"down","C10orf11",83938.0,"","","","chr10:77542518-78317130 (+) // 96.03 // q22.2"]
["11733758_a_at",-0.005557537,-0.08368683,0.0270257,0.078368664,-0.00344944,0.0034489632,0.6913635,0.32719922,-1.0330157,-0.04686222,1.0330157,"down","ZNF446",55663.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016032 // viral reproduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:58987751-58992593 (+) // 98.19 // q13.43"]
["11721725_at",0.0,0.0,-0.04488516,0.023443222,-0.01691246,0.0025815964,0.7371634,0.396295,-1.0125542,-0.01799909,1.0125542,"down","PSKH1",5681.0,"0006468 // protein phosphorylation // non-traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // non-traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // non-traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr16:67927164-67963581 (+) // 96.04 // q22.1"]
["11739969_a_at",0.07496977,-0.026470184,0.17560387,0.009197712,-0.044371605,-0.009197235,0.59979516,0.21264413,1.0639951,0.08949154,1.0639951,"up","MIER1",57708.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007165 // signal transduction // inferred from mutant phenotype /// 0031937 // positive regulation of chromatin silencing // inferred from direct assay /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0017053 // transcriptional repressor complex // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction","chr1:67395925-67454302 (+) // 97.07 // p31.3"]
["11764016_a_at",-0.006058693,0.033329487,-0.006828308,0.006058693,0.0062918663,-0.033095837,0.7993054,0.5021029,1.0095618,0.013729194,1.0095618,"up","TRAPPC2L",51693.0,"0006810 // transport // inferred from electronic annotation /// 0006888 // ER to Golgi vesicle-mediated transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","","chr16:88928480-88929086 (+) // 52.33 // q24.3"]
["11729417_at",0.033056974,0.0,-0.033056974,0.024598122,-0.06669307,0.0,0.88908625,0.69502574,1.0097735,0.014031711,1.0097735,"up","KRT24",192666.0,"","0005737 // cytoplasm // inferred from direct assay /// 0005882 // intermediate filament // inferred from electronic annotation /// 0045111 // intermediate filament cytoskeleton // inferred from direct assay","0005198 // structural molecule activity // inferred from electronic annotation","chr17:38854244-38860004 (-) // 99.05 // q21.2"]
["11744054_a_at",-0.13364887,-0.10850525,-0.08456707,0.1084671,0.08456707,0.15301228,0.08459432,7.978231E-4,-1.1681746,-0.22425595,1.1681746,"down","ZNFX1",57169.0,"","","0046872 // metal ion binding // inferred from electronic annotation","chr20:47862433-47894963 (-) // 94.87 // q13.13"]
["11761367_x_at",-0.04139471,-0.1364317,-0.05562973,0.11723995,0.19775486,0.04139471,0.2655409,0.021917406,-1.1460065,-0.19661517,1.1460065,"down","PKD2L2",27039.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation","chr5:137225154-137278432 (+) // 87.6 // q31.2"]
["11735553_a_at",0.056149006,0.25439405,0.25090504,-0.056149483,-0.06912804,-0.07089901,0.24960664,0.018373717,1.191304,0.25254157,1.191304,"up","C16orf93",90835.0,"","","","chr16:30768752-30773542 (-) // 98.81 // p11.2"]
["11724660_a_at",0.0,-0.12957954,0.11887598,0.15851307,-0.1322298,0.0,0.97390056,0.9165377,-1.0085824,-0.012328888,1.0085824,"down","PAX8",7849.0,"0001655 // urogenital system development // inferred from sequence or structural similarity /// 0001655 // urogenital system development // inferred from electronic annotation /// 0001656 // metanephros development // inferred from electronic annotation /// 0001658 // branching involved in ureteric bud morphogenesis // inferred from expression pattern /// 0001822 // kidney development // inferred from expression pattern /// 0001823 // mesonephros development // inferred from sequence or structural similarity /// 0001823 // mesonephros development // inferred from electronic annotation /// 0003337 // mesenchymal to epithelial transition involved in metanephros morphogenesis // inferred from expression pattern /// 0006351 // transcription, DNA-dependent // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007417 // central nervous system development // inferred from expression pattern /// 0007417 // central nervous system development // inferred from electronic annotation /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030878 // thyroid gland development // inferred from expression pattern /// 0030878 // thyroid gland development // inferred from mutant phenotype /// 0030878 // thyroid gland development // inferred from electronic annotation /// 0039003 // pronephric field specification // inferred from sequence or structural similarity /// 0039003 // pronephric field specification // inferred from electronic annotation /// 0042472 // inner ear morphogenesis // inferred from sequence or structural similarity /// 0042472 // inner ear morphogenesis // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from sequence or structural similarity /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048793 // pronephros development // inferred from sequence or structural similarity /// 0048793 // pronephros development // inferred from electronic annotation /// 0071371 // cellular response to gonadotropin stimulus // inferred from direct assay /// 0071599 // otic vesicle development // inferred from expression pattern /// 0072050 // S-shaped body morphogenesis // inferred from electronic annotation /// 0072073 // kidney epithelium development // inferred from electronic annotation /// 0072108 // positive regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis // inferred from sequence or structural similarity /// 0072108 // positive regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis // inferred from electronic annotation /// 0072164 // mesonephric tubule development // inferred from electronic annotation /// 0072205 // metanephric collecting duct development // inferred from electronic annotation /// 0072207 // metanephric epithelium development // inferred from expression pattern /// 0072221 // metanephric distal convoluted tubule development // inferred from sequence or structural similarity /// 0072221 // metanephric distal convoluted tubule development // inferred from electronic annotation /// 0072278 // metanephric comma-shaped body morphogenesis // inferred from expression pattern /// 0072284 // metanephric S-shaped body morphogenesis // inferred from expression pattern /// 0072289 // metanephric nephron tubule formation // inferred from sequence or structural similarity /// 0072289 // metanephric nephron tubule formation // inferred from electronic annotation /// 0072305 // negative regulation of mesenchymal stem cell apoptotic process involved in metanephric nephron morphogenesis // inferred from sequence or structural similarity /// 0072305 // negative regulation of mesenchymal stem cell apoptotic process involved in metanephric nephron morphogenesis // inferred from electronic annotation /// 0072307 // regulation of metanephric nephron tubule epithelial cell differentiation // inferred from sequence or structural similarity /// 0072307 // regulation of metanephric nephron tubule epithelial cell differentiation // inferred from electronic annotation /// 0090190 // positive regulation of branching involved in ureteric bud morphogenesis // inferred from sequence or structural similarity /// 0090190 // positive regulation of branching involved in ureteric bud morphogenesis // inferred from electronic annotation /// 1900212 // negative regulation of mesenchymal cell apoptotic process involved in metanephros development // inferred from sequence or structural similarity /// 1900215 // negative regulation of apoptotic process involved in metanephric collecting duct development // inferred from sequence or structural similarity /// 1900218 // negative regulation of apoptotic process involved in metanephric nephron tubule development // inferred from sequence or structural similarity /// 2000594 // positive regulation of metanephric DCT cell differentiation // inferred from sequence or structural similarity /// 2000594 // positive regulation of metanephric DCT cell differentiation // inferred from electronic annotation /// 2000611 // positive regulation of thyroid hormone generation // inferred from mutant phenotype /// 2000611 // positive regulation of thyroid hormone generation // inferred from electronic annotation /// 2000612 // regulation of thyroid-stimulating hormone secretion // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from sequence or structural similarity /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay","0000979 // RNA polymerase II core promoter sequence-specific DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from mutant phenotype /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0004996 // thyroid-stimulating hormone receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from electronic annotation","chr2:113972093-114036527 (-) // 91.34 // q13"]
["11753748_x_at",0.16600037,0.062051296,-0.039450645,0.007630825,-0.17072058,-0.007630825,0.6055837,0.21933702,1.0865645,0.11977387,1.0865645,"up","MED16",10025.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // non-traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // inferred from direct assay /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0030518 // intracellular steroid hormone receptor signaling pathway // inferred from direct assay /// 0030521 // androgen receptor signaling pathway // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0016592 // mediator complex // inferred from direct assay /// 0016592 // mediator complex // inferred from electronic annotation","0003712 // transcription cofactor activity // inferred from direct assay /// 0003713 // transcription coactivator activity // traceable author statement /// 0004872 // receptor activity // inferred from direct assay /// 0030375 // thyroid hormone receptor coactivator activity // inferred from direct assay /// 0042809 // vitamin D receptor binding // non-traceable author statement /// 0046966 // thyroid hormone receptor binding // inferred from direct assay","chr19:867971-891148 (-) // 100.0 // p13.3"]
["11732847_at",-0.019721985,0.06014824,-0.0048885345,0.18186188,0.0048885345,-0.13584328,0.9876409,0.9596333,-1.0035574,-0.005123199,1.0035574,"down","CABP7",164633.0,"","0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0032588 // trans-Golgi network membrane // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr22:30116343-30127826 (+) // 84.66 // q12.2"]
["11716236_s_at",0.04785061,0.059752464,-0.01511097,-0.015951157,-0.0137319565,0.0137319565,0.60938543,0.22342281,1.0253723,0.03614778,1.0253723,"up","RAE1",8480.0,"0005975 // carbohydrate metabolic process // traceable author statement /// 0006406 // mRNA export from nucleus // traceable author statement /// 0008645 // hexose transport // traceable author statement /// 0010827 // regulation of glucose transport // traceable author statement /// 0015758 // glucose transport // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0071407 // cellular response to organic cyclic compound // inferred from electronic annotation","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // traceable author statement /// 0005640 // nuclear outer membrane // traceable author statement /// 0005643 // nuclear pore // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005856 // cytoskeleton // traceable author statement","0003723 // RNA binding // traceable author statement /// 0008017 // microtubule binding // inferred from sequence or structural similarity","chr20:55926585-55953796 (+) // 95.85 // q13.31"]
["11731368_at",-0.044375896,0.022761822,-0.022761822,0.10352659,-0.06785154,0.2639923,0.67532414,0.3061669,-1.0827357,-0.11468106,1.0827357,"down","ZNF442",79973.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:12460183-12476475 (-) // 77.08 // p13.2"]
["11722373_a_at",0.0108008385,-0.05249691,0.19477558,-0.02665472,0.02596426,-0.0108008385,0.802662,0.50920314,1.0387561,0.054856993,1.0387561,"up","GGA2",23062.0,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // non-traceable author statement /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation","0005622 // intracellular // non-traceable author statement /// 0005622 // intracellular // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from direct assay /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030131 // clathrin adaptor complex // inferred from electronic annotation /// 0030136 // clathrin-coated vesicle // inferred from direct assay /// 0044431 // Golgi apparatus part // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0030306 // ADP-ribosylation factor binding // inferred from direct assay","chr16:23474936-23521835 (-) // 83.87 // p12.2"]
["11755648_a_at",0.0706892,0.08013344,0.04252529,-0.043509483,-0.098098755,-0.04252529,0.14622554,0.00429544,1.0911331,0.12582712,1.0911331,"up","MICAL2",9645.0,"0008152 // metabolic process // inferred from electronic annotation /// 0030042 // actin filament depolymerization // inferred from sequence or structural similarity /// 0055114 // oxidation-reduction process // inferred from sequence or structural similarity /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation","0003779 // actin binding // inferred from sequence or structural similarity /// 0003779 // actin binding // inferred from electronic annotation /// 0004497 // monooxygenase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016709 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation /// 0071949 // FAD binding // inferred from sequence or structural similarity","chr11:12274078-12285334 (+) // 59.68 // p15.3"]
["11746423_a_at",-0.036397934,-0.057824135,0.053811073,-0.0061216354,0.0061216354,0.044493675,0.79369175,0.49186814,-1.0198108,-0.028301515,1.0198108,"down","RNFT1",51136.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:58030263-58042122 (-) // 96.41 // q23.1"]
["11762184_at",-0.07248354,0.003279686,0.09549332,0.08263302,-0.003279686,-0.16486359,0.88795346,0.6914628,1.0261678,0.03726659,1.0261678,"up","SLC25A42",284439.0,"0006810 // transport // inferred from electronic annotation /// 0015866 // ADP transport // inferred from direct assay /// 0015867 // ATP transport // inferred from direct assay /// 0035349 // coenzyme A transmembrane transport // inferred from direct assay /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0080121 // AMP transport // inferred from direct assay","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005347 // ATP transmembrane transporter activity // inferred from direct assay /// 0015217 // ADP transmembrane transporter activity // inferred from direct assay /// 0015228 // coenzyme A transmembrane transporter activity // inferred from direct assay /// 0043262 // adenosine-diphosphatase activity // inferred from direct assay /// 0080122 // AMP transmembrane transporter activity // inferred from direct assay","chr19:19206751-19217743 (+) // 76.22 // p13.11"]
["11744248_a_at",0.002636671,-3.2901764E-4,-0.10299802,0.0803113,3.2901764E-4,-0.19924116,0.9851717,0.95034236,1.0041468,0.005970218,1.0041468,"up","LRRC4C",57689.0,"0050770 // regulation of axonogenesis // inferred from direct assay","0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr11:40135752-40315691 (-) // 94.38 // p12"]
["11721718_a_at",0.021637917,-0.01896429,0.0061855316,-0.055425644,-0.0061855316,0.032060623,0.8793384,0.67067164,1.008914,0.012803195,1.008914,"up","ATRX",546.0,"0006281 // DNA repair // inferred from electronic annotation /// 0006281 // DNA repair // traceable author statement /// 0006306 // DNA methylation // traceable author statement /// 0006310 // DNA recombination // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation /// 0032508 // DNA duplex unwinding // traceable author statement","0000228 // nuclear chromosome // inferred from electronic annotation /// 0000792 // heterochromatin // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005720 // nuclear heterochromatin // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003678 // DNA helicase activity // traceable author statement /// 0003682 // chromatin binding // inferred from electronic annotation /// 0004386 // helicase activity // traceable author statement /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070087 // chromo shadow domain binding // inferred from physical interaction","chrX:76760357-77041755 (-) // 97.35 // q21.1"]
["11758201_s_at",0.022524834,0.038096428,-0.023264885,-0.06429958,-0.010004997,0.010004997,0.67476004,0.30521962,1.0237656,0.033885386,1.0237656,"up","IMPAD1",54928.0,"0001501 // skeletal system development // inferred from electronic annotation /// 0001958 // endochondral ossification // inferred from electronic annotation /// 0002063 // chondrocyte development // inferred from electronic annotation /// 0006021 // inositol biosynthetic process // inferred from electronic annotation /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0030204 // chondroitin sulfate metabolic process // inferred from electronic annotation /// 0042733 // embryonic digit morphogenesis // inferred from electronic annotation /// 0046854 // phosphatidylinositol phosphorylation // inferred from electronic annotation","0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008254 // 3'-nucleotidase activity // inferred from electronic annotation /// 0008441 // 3'(2'),5'-bisphosphate nucleotidase activity // inferred from electronic annotation /// 0008934 // inositol monophosphate 1-phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0052832 // inositol monophosphate 3-phosphatase activity // inferred from electronic annotation /// 0052833 // inositol monophosphate 4-phosphatase activity // inferred from electronic annotation /// 0052834 // inositol monophosphate phosphatase activity // inferred from electronic annotation","chr8:57870489-57871203 (-) // 70.28 // q12.1"]
["11763943_at",0.09602523,-0.0067868233,0.09602523,0.0067870617,-0.14767933,-0.033571243,0.46827853,0.105667226,1.0866663,0.11990903,1.0866663,"up","MT1DP",326343.0,"","","0046872 // metal ion binding // inferred from electronic annotation","chr16:56677597-56679161 (+) // 89.9 // q12.2"]
["11717792_a_at",0.005265236,-0.054593563,-0.005265236,0.100669384,0.02836132,-0.15222073,0.96681243,0.8989917,-1.0072821,-0.010467836,1.0072821,"down","FAM219A",203259.0,"","","","chr9:34398026-34458568 (-) // 87.17 // p13.3"]
["11761565_x_at",0.051703453,6.699562E-4,-6.6947937E-4,-0.12697935,0.067279816,-0.041115284,0.7619903,0.43592954,1.0358676,0.050839577,1.0358676,"up","CEP70",80321.0,"0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr3:138251355-138313382 (-) // 82.69 // q22.3"]
["11763255_x_at",-0.1309228,0.004336357,-0.070409775,-0.004336357,0.051293373,0.12289381,0.4344304,0.08514983,-1.0884554,-0.12228234,1.0884554,"down","IGLJ3",28831.0,"","","","chr22:23063353-23264812 (+) // 84.66 // q11.22"]
["11727076_x_at",-0.07871437,-0.19747996,0.017549276,0.08998585,0.07078171,-0.017549276,0.504336,0.13003792,-1.0972973,-0.13395447,1.0972973,"down","PLAC4",191585.0,"","0019028 // viral capsid // inferred from electronic annotation","0005198 // structural molecule activity // inferred from electronic annotation","chr21:42547158-42551989 (-) // 27.4 // q22.2"]
["11758873_a_at",-0.037290096,0.07098818,-0.004732132,0.004732132,0.060557842,-0.09040642,0.9161767,0.7574374,1.0125741,0.018027455,1.0125741,"up","HPSE",10855.0,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006029 // proteoglycan metabolic process // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007160 // cell-matrix adhesion // inferred from direct assay /// 0010575 // positive regulation vascular endothelial growth factor production // inferred from direct assay /// 0030194 // positive regulation of blood coagulation // inferred from direct assay /// 0030200 // heparan sulfate proteoglycan catabolic process // inferred from direct assay /// 0033690 // positive regulation of osteoblast proliferation // inferred from direct assay /// 0033690 // positive regulation of osteoblast proliferation // inferred from electronic annotation /// 0042060 // wound healing // inferred from electronic annotation /// 0051797 // regulation of hair follicle development // inferred from direct assay /// 0051798 // positive regulation of hair follicle development // inferred from electronic annotation /// 0051897 // positive regulation of protein kinase B signaling cascade // inferred from direct assay /// 0051897 // positive regulation of protein kinase B signaling cascade // inferred from electronic annotation /// 0060055 // angiogenesis involved in wound healing // inferred from electronic annotation /// 0061042 // vascular wound healing // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005764 // lysosome // inferred from direct assay /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0045121 // membrane raft // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004566 // beta-glucuronidase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity, acting on glycosyl bonds // inferred from electronic annotation /// 0030305 // heparanase activity // inferred from direct assay /// 0043169 // cation binding // inferred from electronic annotation /// 0045545 // syndecan binding // inferred from direct assay /// 0046983 // protein dimerization activity // inferred from direct assay","chr4:84213613-84256306 (-) // 72.12 // q21.23"]
["11731483_a_at",-0.20023489,-0.020295143,-0.08057141,0.06337857,0.020295143,0.13176632,0.36016524,0.05006659,-1.1267602,-0.17218056,1.1267602,"down","CNRIP1",25927.0,"","","","chr2:68520148-68547193 (-) // 97.66 // p14"]
["11722822_a_at",-0.10606551,-0.062216997,0.17824268,0.07920408,0.05600977,-0.05600977,0.9422414,0.8249095,-1.0161273,-0.02308122,1.0161273,"down","SKP1",6500.0,"0000080 // G1 phase of mitotic cell cycle // traceable author statement /// 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000084 // S phase of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0007219 // Notch signaling pathway // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016567 // protein ubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0031146 // SCF-dependent proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0031146 // SCF-dependent proteasomal ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0035518 // histone H2A monoubiquitination // inferred from direct assay /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement","0005654 // nucleoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0019005 // SCF ubiquitin ligase complex // inferred from direct assay /// 0019005 // SCF ubiquitin ligase complex // inferred from electronic annotation /// 0031519 // PcG protein complex // inferred from direct assay","0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction","chr5:133492081-133512724 (-) // 98.94 // q31.1"]
["11747218_a_at",-0.045204878,-0.4534762,-0.13846803,0.061788082,0.061788082,0.045205116,0.45043054,0.09551188,-1.2046746,-0.2686435,1.2046746,"down","LOC442028",442028.0,"","","","chr2:95533230-95601120 (-) // 91.97 // q11.1"]
["11762671_at",-0.1099205,-0.10727072,-0.00950551,0.06385374,0.009505272,0.06763077,0.30685055,0.032123175,-1.0886666,-0.12256215,1.0886666,"down","C2",717.0,"0006508 // proteolysis // inferred from electronic annotation /// 0006956 // complement activation // traceable author statement /// 0006956 // complement activation // inferred from electronic annotation /// 0006958 // complement activation, classical pathway // inferred from electronic annotation /// 0006958 // complement activation, classical pathway // traceable author statement /// 0030449 // regulation of complement activation // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement","0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr6:31895479-31902785 (+) // 65.35 // p21.33"]
["11741085_a_at",0.020421028,-0.026946068,0.025874138,0.0058164597,-0.0058164597,-0.01529789,0.8255668,0.55285907,1.0080373,0.011549064,1.0080373,"up","APLP2",334.0,"0001967 // suckling behavior // inferred from electronic annotation /// 0006878 // cellular copper ion homeostasis // inferred from electronic annotation /// 0007176 // regulation of epidermal growth factor-activated receptor activity // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // non-traceable author statement /// 0007617 // mating behavior // inferred from electronic annotation /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation /// 0030901 // midbrain development // inferred from electronic annotation /// 0050885 // neuromuscular process controlling balance // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008201 // heparin binding // inferred from electronic annotation /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0046914 // transition metal ion binding // inferred from electronic annotation","chr11:129939715-130014705 (+) // 96.28 // q24.3"]
["11753363_x_at",0.06736946,-0.13078141,0.011256695,0.106935024,-0.06808615,-0.011256695,0.91394573,0.75138015,-1.0185964,-0.02658254,1.0185964,"down","ZSCAN2",54993.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0016032 // viral reproduction // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr15:85147131-85166867 (+) // 87.88 // q25.2"]
["11754717_a_at",-0.07936764,0.02114296,0.07771587,-0.02114296,-0.027267456,0.04614353,0.96571743,0.8950213,1.0050398,0.00725265,1.0050398,"up","TPP2",7174.0,"0000209 // protein polyubiquitination // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0006508 // proteolysis // not recorded /// 0006508 // proteolysis // inferred from electronic annotation /// 0006508 // proteolysis // traceable author statement","0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0004175 // endopeptidase activity // traceable author statement /// 0004177 // aminopeptidase activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // not recorded /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0008240 // tripeptidyl-peptidase activity // inferred from electronic annotation /// 0008240 // tripeptidyl-peptidase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042277 // peptide binding // inferred from electronic annotation","chr13:103309296-103330809 (+) // 65.15 // q33.1"]
["11744028_a_at",-0.01905632,0.0035448074,-0.06389332,0.025117874,0.048190117,-0.0035448074,0.48562762,0.1158054,-1.0350659,-0.04972261,1.0350659,"down","SLC35A1",10559.0,"0005975 // carbohydrate metabolic process // traceable author statement /// 0006464 // cellular protein modification process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0008643 // carbohydrate transport // inferred from electronic annotation /// 0015780 // nucleotide-sugar transport // inferred from electronic annotation /// 0015782 // CMP-N-acetylneuraminate transport // traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0000139 // Golgi membrane // inferred from electronic annotation /// 0000139 // Golgi membrane // traceable author statement /// 0005794 // Golgi apparatus // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005338 // nucleotide-sugar transmembrane transporter activity // inferred from electronic annotation /// 0005351 // sugar:hydrogen symporter activity // inferred from electronic annotation /// 0005456 // CMP-N-acetylneuraminate transmembrane transporter activity // traceable author statement","chr6:88182636-88222057 (+) // 98.35 // q15"]
["11729834_at",-0.3234625,-0.027309895,0.027309895,0.062856674,0.035736084,-0.072169304,0.72225034,0.37346366,-1.0841984,-0.11662872,1.0841984,"down","EIF5A2",56648.0,"0006412 // translation // inferred from electronic annotation /// 0006414 // translational elongation // inferred from electronic annotation /// 0006452 // translational frameshifting // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0007283 // spermatogenesis // non-traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from genetic interaction /// 0008612 // peptidyl-lysine modification to hypusine // traceable author statement /// 0008612 // peptidyl-lysine modification to hypusine // inferred from electronic annotation /// 0010509 // polyamine homeostasis // non-traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045901 // positive regulation of translational elongation // inferred from electronic annotation /// 0045905 // positive regulation of translational termination // inferred from electronic annotation /// 0051028 // mRNA transport // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005643 // nuclear pore // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0003746 // translation elongation factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0043022 // ribosome binding // inferred from electronic annotation","chr3:170606203-170626477 (-) // 84.51 // q26.2"]
["11724315_a_at",-0.0036392212,0.0036392212,0.12784529,0.058184147,-0.05474472,-0.050043106,0.7142709,0.36078498,1.0411296,0.05814965,1.0411296,"up","LUZP1",7798.0,"","0005634 // nucleus // inferred from electronic annotation","","chr1:23410028-23495351 (-) // 91.43 // p36.12"]
["11761382_x_at",-0.06730747,-0.0070364475,0.2092185,0.03514123,0.007036686,-0.02315855,0.8817845,0.6753417,1.0271298,0.038618464,1.0271298,"up","SORBS2",8470.0,"","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement /// 0030018 // Z disc // non-traceable author statement /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005200 // structural constituent of cytoskeleton // traceable author statement /// 0008093 // cytoskeletal adaptor activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008307 // structural constituent of muscle // traceable author statement","chr4:186547819-186877488 (-) // 99.81 // q35.1"]
["11739567_s_at",0.14062595,0.19618559,0.06979847,-0.090708256,-0.15451765,-0.06979847,0.16290171,0.0057054353,1.1814387,0.24054475,1.1814387,"up","FKBP5",2289.0,"0000413 // protein peptidyl-prolyl isomerization // not recorded /// 0000413 // protein peptidyl-prolyl isomerization // inferred from electronic annotation /// 0006457 // protein folding // inferred from electronic annotation /// 0006457 // protein folding // traceable author statement /// 0018208 // peptidyl-proline modification // not recorded","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // not recorded","0003755 // peptidyl-prolyl cis-trans isomerase activity // not recorded /// 0003755 // peptidyl-prolyl cis-trans isomerase activity // inferred from electronic annotation /// 0005528 // FK506 binding // not recorded /// 0005528 // FK506 binding // traceable author statement /// 0016853 // isomerase activity // inferred from electronic annotation /// 0031072 // heat shock protein binding // inferred from physical interaction","chr6:35541432-35610623 (-) // 87.87 // p21.31"]
["11719928_a_at",-0.05237007,0.004082203,0.050349712,0.0072369576,-0.065041065,-0.004082203,0.8466193,0.59757835,1.0148848,0.021316018,1.0148848,"up","KDM5B",10765.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0034720 // histone H3-K4 demethylation // inferred from direct assay /// 0034720 // histone H3-K4 demethylation // inferred from electronic annotation /// 0034721 // histone H3-K4 demethylation, trimethyl-H3-K4-specific // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003714 // transcription corepressor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016702 // oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen // inferred from electronic annotation /// 0016706 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors // inferred from electronic annotation /// 0032453 // histone demethylase activity (H3-K4 specific) // inferred from electronic annotation /// 0034647 // histone demethylase activity (H3-trimethyl-K4 specific) // inferred from direct assay /// 0034648 // histone demethylase activity (H3-dimethyl-K4 specific) // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:202696344-202778598 (-) // 90.96 // q32.1"]
["11747044_s_at",0.018712997,-0.018712997,0.033517838,-0.07188225,-0.03351593,0.07188225,0.8703471,0.6504984,1.0156087,0.022344613,1.0156087,"up","LOC653375 /// WBSCR16","653375 /// 81554","","0005739 // mitochondrion // inferred from electronic annotation","","chr7:74765844-74790085 (+) // 97.03 // q11.23 /// chr7:74456328-74480572 (-) // 97.31 // q11.23"]
["11760079_at",-0.027916908,0.027916908,-0.024502039,0.024502039,-0.024502039,0.033637047,0.79286855,0.49023783,-1.0135236,-0.019379651,1.0135236,"down","ABCA1",19.0,"0002790 // peptide secretion // inferred from electronic annotation /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006497 // protein lipidation // inferred from electronic annotation /// 0006629 // lipid metabolic process // traceable author statement /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006820 // anion transport // inferred from sequence or structural similarity /// 0006820 // anion transport // inferred from electronic annotation /// 0006911 // phagocytosis, engulfment // inferred from electronic annotation /// 0007040 // lysosome organization // inferred from direct assay /// 0007186 // G-protein coupled receptor signaling pathway // inferred from mutant phenotype /// 0008202 // steroid metabolic process // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // inferred from direct assay /// 0008203 // cholesterol metabolic process // inferred from electronic annotation /// 0010745 // negative regulation of macrophage derived foam cell differentiation // traceable author statement /// 0010875 // positive regulation of cholesterol efflux // inferred from electronic annotation /// 0010887 // negative regulation of cholesterol storage // traceable author statement /// 0016197 // endosomal transport // inferred from direct assay /// 0030819 // positive regulation of cAMP biosynthetic process // inferred from mutant phenotype /// 0032367 // intracellular cholesterol transport // inferred from mutant phenotype /// 0032488 // Cdc42 protein signal transduction // inferred from mutant phenotype /// 0033344 // cholesterol efflux // inferred from direct assay /// 0033344 // cholesterol efflux // inferred from mutant phenotype /// 0033344 // cholesterol efflux // inferred from electronic annotation /// 0033700 // phospholipid efflux // inferred from direct assay /// 0033700 // phospholipid efflux // inferred from mutant phenotype /// 0033700 // phospholipid efflux // inferred from electronic annotation /// 0034380 // high-density lipoprotein particle assembly // inferred from mutant phenotype /// 0034616 // response to laminar fluid shear stress // inferred from expression pattern /// 0038027 // apolipoprotein A-I-mediated signaling pathway // inferred from direct assay /// 0042157 // lipoprotein metabolic process // traceable author statement /// 0042157 // lipoprotein metabolic process // inferred from electronic annotation /// 0042158 // lipoprotein biosynthetic process // inferred from electronic annotation /// 0042632 // cholesterol homeostasis // inferred from direct assay /// 0043691 // reverse cholesterol transport // inferred from mutant phenotype /// 0043691 // reverse cholesterol transport // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045332 // phospholipid translocation // inferred from electronic annotation /// 0050702 // interleukin-1 beta secretion // inferred from mutant phenotype /// 0055091 // phospholipid homeostasis // inferred from mutant phenotype /// 0055098 // response to low-density lipoprotein particle stimulus // inferred from expression pattern /// 0060155 // platelet dense granule organization // inferred from mutant phenotype /// 0071222 // cellular response to lipopolysaccharide // inferred from electronic annotation /// 0071300 // cellular response to retinoic acid // inferred from electronic annotation","0005622 // intracellular // inferred from mutant phenotype /// 0005624 // membrane fraction // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030139 // endocytic vesicle // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation /// 0045121 // membrane raft // inferred from direct assay /// 0045335 // phagocytic vesicle // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred by curator /// 0005548 // phospholipid transporter activity // inferred from direct assay /// 0005548 // phospholipid transporter activity // inferred from electronic annotation /// 0008509 // anion transmembrane transporter activity // inferred from sequence or structural similarity /// 0008509 // anion transmembrane transporter activity // inferred from electronic annotation /// 0015485 // cholesterol binding // inferred by curator /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0017127 // cholesterol transporter activity // inferred from direct assay /// 0017127 // cholesterol transporter activity // inferred from electronic annotation /// 0019905 // syntaxin binding // inferred from physical interaction /// 0031267 // small GTPase binding // inferred from physical interaction /// 0034185 // apolipoprotein binding // inferred from physical interaction /// 0034186 // apolipoprotein A-I binding // inferred from physical interaction /// 0034188 // apolipoprotein A-I receptor activity // inferred from direct assay","chr9:107606051-107690426 (-) // 81.74 // q31.1"]
["11735036_a_at",0.2657678,-0.022650719,-0.25232768,-0.1943922,0.022650957,0.19966388,0.9853279,0.9507382,-1.0086164,-0.012377656,1.0086164,"down","SORCS1",114815.0,"0007218 // neuropeptide signaling pathway // non-traceable author statement","0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008188 // neuropeptide receptor activity // non-traceable author statement","chr10:108333420-108924326 (-) // 94.46 // q25.1"]
["11730971_a_at",-0.037397385,-0.11583042,-0.040201664,0.037396908,0.167305,0.10658836,0.26192343,0.020847766,-1.1236868,-0.16823997,1.1236868,"down","CYP4F12",66002.0,"0000038 // very long-chain fatty acid metabolic process // inferred from sequence or structural similarity /// 0001676 // long-chain fatty acid metabolic process // inferred from sequence or structural similarity /// 0003091 // renal water homeostasis // inferred from sequence or structural similarity /// 0003095 // pressure natriuresis // inferred from sequence or structural similarity /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0017144 // drug metabolic process // inferred from sequence or structural similarity /// 0019369 // arachidonic acid metabolic process // inferred from sequence or structural similarity /// 0019373 // epoxygenase P450 pathway // inferred from sequence or structural similarity /// 0030195 // negative regulation of blood coagulation // inferred from sequence or structural similarity /// 0036101 // leukotriene B4 catabolic process // inferred from sequence or structural similarity /// 0042360 // vitamin E metabolic process // inferred from sequence or structural similarity /// 0042371 // vitamin K biosynthetic process // inferred from sequence or structural similarity /// 0044281 // small molecule metabolic process // traceable author statement /// 0055078 // sodium ion homeostasis // inferred from sequence or structural similarity /// 0055114 // oxidation-reduction process // inferred from sequence or structural similarity /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from sequence or structural similarity /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from sequence or structural similarity","0004497 // monooxygenase activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from electronic annotation /// 0008392 // arachidonic acid epoxygenase activity // inferred from sequence or structural similarity /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016705 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen // inferred from electronic annotation /// 0018685 // alkane 1-monooxygenase activity // inferred from sequence or structural similarity /// 0020037 // heme binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047057 // vitamin-K-epoxide reductase (warfarin-sensitive) activity // inferred from sequence or structural similarity /// 0050051 // leukotriene-B4 20-monooxygenase activity // inferred from sequence or structural similarity /// 0070330 // aromatase activity // inferred from electronic annotation","chr19:15783885-15807984 (+) // 98.06 // p13.12"]
["11722025_x_at",0.043314934,0.016608238,0.06300974,-0.02975607,-0.016608715,-0.048181057,0.20584597,0.01119219,1.0515321,0.07249296,1.0515321,"up","ABCF2",10061.0,"0006200 // ATP catabolic process // inferred from electronic annotation /// 0006810 // transport // traceable author statement","0005739 // mitochondrion // inferred from electronic annotation /// 0005740 // mitochondrial envelope // traceable author statement /// 0043190 // ATP-binding cassette (ABC) transporter complex // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0005215 // transporter activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0005524 // ATP binding // traceable author statement /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation","chr7:150909140-150924666 (-) // 81.12 // q36.1"]
["11732237_a_at",0.07918596,0.0,-0.05000782,0.0,-0.0406909,0.098306894,0.9589734,0.8734142,-1.0065922,-0.009479258,1.0065922,"down","GYPA",2993.0,"0007016 // cytoskeletal anchoring at plasma membrane // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0047484 // regulation of response to osmotic stress // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from electronic annotation","chr4:145030456-145061939 (-) // 81.82 // q31.21"]
["11727427_a_at",0.068892956,-0.096212864,0.024873734,0.027824402,-0.024873734,-0.029487133,0.9631414,0.88621426,1.0055816,0.008030182,1.0055816,"up","ACSM3",6296.0,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008217 // regulation of blood pressure // non-traceable author statement /// 0008217 // regulation of blood pressure // traceable author statement /// 0042632 // cholesterol homeostasis // non-traceable author statement","0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0015645 // fatty acid ligase activity // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047760 // butyrate-CoA ligase activity // inferred from electronic annotation","chr16:20775023-20808901 (+) // 99.37 // p12.3"]
["11726440_s_at",-0.022548676,-0.0054912567,0.029140472,-0.008532524,0.116641045,0.0054912567,0.75725746,0.42656726,-1.0263336,-0.0374997,1.0263336,"down","MALT1",10892.0,"0001923 // B-1 B cell differentiation // inferred from electronic annotation /// 0002237 // response to molecule of bacterial origin // inferred from electronic annotation /// 0002726 // positive regulation of T cell cytokine production // inferred from mutant phenotype /// 0006508 // proteolysis // inferred from direct assay /// 0006508 // proteolysis // inferred from electronic annotation /// 0006916 // anti-apoptosis // non-traceable author statement /// 0006952 // defense response // non-traceable author statement /// 0007250 // activation of NF-kappaB-inducing kinase activity // inferred from mutant phenotype /// 0009620 // response to fungus // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from direct assay /// 0031398 // positive regulation of protein ubiquitination // non-traceable author statement /// 0032743 // positive regulation of interleukin-2 production // inferred from mutant phenotype /// 0042098 // T cell proliferation // inferred from electronic annotation /// 0042113 // B cell activation // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from direct assay /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from mutant phenotype /// 0045087 // innate immune response // inferred from electronic annotation /// 0050852 // T cell receptor signaling pathway // inferred from direct assay /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0050856 // regulation of T cell receptor signaling pathway // inferred from electronic annotation /// 0050870 // positive regulation of T cell activation // inferred by curator /// 0050870 // positive regulation of T cell activation // inferred from electronic annotation /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from mutant phenotype /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from electronic annotation /// 0051168 // nuclear export // inferred from direct assay /// 0051259 // protein oligomerization // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0032449 // CBM complex // non-traceable author statement /// 0043234 // protein complex // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0002020 // protease binding // inferred from electronic annotation /// 0004197 // cysteine-type endopeptidase activity // non-traceable author statement /// 0004197 // cysteine-type endopeptidase activity // inferred from electronic annotation /// 0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0004871 // signal transducer activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from direct assay /// 0008233 // peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0019209 // kinase activator activity // inferred from mutant phenotype /// 0043621 // protein self-association // inferred from physical interaction","chr18:56338617-56417212 (+) // 68.09 // q21.32"]
["11737282_x_at",-0.03490448,0.026149273,-0.026149273,0.18052578,-0.040947437,0.07062054,0.6613813,0.28790405,-1.0582651,-0.08170106,1.0582651,"down","ZC3HAV1L",92092.0,"","","","chr7:138710177-138720775 (-) // 74.86 // q34"]
["11727854_s_at",0.091944695,0.0040569305,0.14738369,-0.017989159,-0.0040569305,-0.010444641,0.4467984,0.09331253,1.0658162,0.09195862,1.0658162,"up","NUP50",10762.0,"0005975 // carbohydrate metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0008645 // hexose transport // traceable author statement /// 0010827 // regulation of glucose transport // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0015758 // glucose transport // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046907 // intracellular transport // inferred from electronic annotation /// 0051028 // mRNA transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005643 // nuclear pore // inferred from electronic annotation /// 0005643 // nuclear pore // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr22:45559725-45584055 (+) // 98.43 // q13.31"]
["11759858_at",0.044059277,0.092347145,-0.04566574,0.4307952,-0.0837183,-0.044059277,0.89068365,0.69887877,-1.0502691,-0.07075906,1.0502691,"down","CTAGE5",4253.0,"0043085 // positive regulation of catalytic activity // traceable author statement","","0008047 // enzyme activator activity // traceable author statement","chr14:39736449-39857948 (+) // 72.17 // q21.1"]
["11747296_a_at",0.003727913,-0.10013437,0.065552235,-0.003727913,-0.12940931,0.04997015,0.94038254,0.8201732,1.0121602,0.017437626,1.0121602,"up","ARMC8",25852.0,"","","","chr3:137906124-138015096 (+) // 97.89 // q22.3"]
["11715723_s_at",-0.051654816,-0.03579235,0.0055713654,-0.0055713654,0.13743591,0.11289024,0.42960596,0.08290933,-1.0783883,-0.108876795,1.0783883,"down","ITM2B",9445.0,"0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0008219 // cell death // inferred from electronic annotation /// 0042985 // negative regulation of amyloid precursor protein biosynthetic process // inferred from direct assay","0000139 // Golgi membrane // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030660 // Golgi-associated vesicle membrane // inferred from direct assay /// 0031301 // integral to organelle membrane // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0001540 // beta-amyloid binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation","chr13:48807273-48836451 (+) // 86.85 // q14.2"]
["11721415_at",-0.13837051,-0.018020153,-0.12850142,0.018020153,0.13615894,0.1134367,0.2810659,0.02531337,-1.1361626,-0.18416937,1.1361626,"down","TMEM62",80021.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr15:43425719-43477344 (+) // 97.52 // q15.2"]
["11743796_a_at",0.06334877,-0.02471447,0.14747143,0.0036802292,-0.0036802292,-0.08498955,0.575597,0.18964216,1.0646396,0.09036509,1.0646396,"up","APITD1 /// APITD1-CORT","100526739 /// 378708","0000087 // M phase of mitotic cell cycle // traceable author statement /// 0000236 // mitotic prometaphase // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0000712 // resolution of meiotic recombination intermediates // inferred from mutant phenotype /// 0006281 // DNA repair // inferred from direct assay /// 0006281 // DNA repair // inferred from electronic annotation /// 0006352 // transcription initiation, DNA-dependent // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from direct assay /// 0006974 // response to DNA damage stimulus // inferred from mutant phenotype /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0031297 // replication fork processing // inferred from mutant phenotype /// 0031398 // positive regulation of protein ubiquitination // traceable author statement /// 0051301 // cell division // inferred from electronic annotation","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0043240 // Fanconi anaemia nuclear complex // inferred from direct assay /// 0071821 // FANCM-MHF complex // inferred from direct assay","0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from direct assay /// 0003690 // double-stranded DNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction","chr1:10490158-10512210 (+) // 94.29 // p36.22"]
["11748408_a_at",0.09160566,0.26861048,-0.11756182,0.005797386,-0.13613272,-0.005797386,0.7094419,0.35395008,1.0914624,0.1262624,1.0914624,"up","C1orf9",51430.0,"0001503 // ossification // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030867 // rough endoplasmic reticulum membrane // inferred from electronic annotation","","chr1:172502145-172572423 (+) // 96.15 // q24.3"]
["11749566_s_at",0.025703907,0.015111446,0.08852577,-0.05792904,-0.01511097,-0.031269073,0.33507898,0.04053691,1.0554684,0.07788344,1.0554684,"up","LCMT2",9836.0,"0008033 // tRNA processing // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation","","0005515 // protein binding // inferred from physical interaction /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr15:43620438-43622780 (-) // 98.56 // q15.3"]
["11731251_at",-0.0023698807,0.0039491653,-7.8964233E-4,0.09041691,7.8964233E-4,-0.00935936,0.76572895,0.44284448,-1.0189047,-0.0270191,1.0189047,"down","EPHA8",2046.0,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0006929 // substrate-dependent cell migration // inferred from sequence or structural similarity /// 0006929 // substrate-dependent cell migration // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007411 // axon guidance // inferred from sequence or structural similarity /// 0007411 // axon guidance // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016322 // neuron remodeling // inferred from sequence or structural similarity /// 0016322 // neuron remodeling // inferred from electronic annotation /// 0030155 // regulation of cell adhesion // inferred from sequence or structural similarity /// 0030155 // regulation of cell adhesion // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from sequence or structural similarity /// 0031175 // neuron projection development // inferred from electronic annotation /// 0033628 // regulation of cell adhesion mediated by integrin // inferred from sequence or structural similarity /// 0033628 // regulation of cell adhesion mediated by integrin // inferred from electronic annotation /// 0043410 // positive regulation of MAPK cascade // inferred from sequence or structural similarity /// 0043410 // positive regulation of MAPK cascade // inferred from electronic annotation /// 0043552 // positive regulation of phosphatidylinositol 3-kinase activity // inferred from sequence or structural similarity /// 0043552 // positive regulation of phosphatidylinositol 3-kinase activity // inferred from electronic annotation /// 0046777 // protein autophosphorylation // inferred from sequence or structural similarity /// 0046777 // protein autophosphorylation // inferred from electronic annotation /// 0048013 // ephrin receptor signaling pathway // inferred from sequence or structural similarity /// 0048013 // ephrin receptor signaling pathway // inferred from electronic annotation","0005768 // endosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from sequence or structural similarity /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043005 // neuron projection // inferred from sequence or structural similarity /// 0043005 // neuron projection // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005003 // ephrin receptor activity // inferred from electronic annotation /// 0005004 // GPI-linked ephrin receptor activity // inferred from sequence or structural similarity /// 0005004 // GPI-linked ephrin receptor activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr1:22889994-22916114 (+) // 83.62 // p36.12"]
["11742443_a_at",0.056450367,-0.10968208,0.005666971,-0.005666971,0.02126503,-0.16836047,0.8801877,0.6723248,1.0246036,0.035065874,1.0246036,"up","PRDM13",59336.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0022008 // neurogenesis // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:100054649-100063454 (+) // 95.63 // q16.2"]
["11763254_at",-0.013404608,0.006333351,0.25520325,-0.07691622,0.2064457,-0.006333351,0.9128083,0.7487215,1.029287,0.04164528,1.029287,"up","CYAT1 /// IGLC1 /// IGLV1-44","100290481 /// 28823 /// 3537","0006955 // immune response // non-traceable author statement /// 0006956 // complement activation // traceable author statement /// 0006958 // complement activation, classical pathway // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0050776 // regulation of immune response // traceable author statement","0005576 // extracellular region // traceable author statement /// 0005886 // plasma membrane // traceable author statement","0003823 // antigen binding // non-traceable author statement /// 0003823 // antigen binding // inferred from electronic annotation","chr22:22764097-23248558 (+) // 98.34 // q11.22"]
["11733677_at",-0.04260826,-0.14714551,-0.060377836,0.060378075,0.0426085,0.31234813,0.41699237,0.07534481,-1.1662055,-0.22182205,1.1662055,"down","C4orf50",389197.0,"","","","chr4:5958838-5990166 (-) // 78.68 // p16.2"]
["11756078_a_at",-0.108811855,-0.16968966,0.28086424,0.035419464,-0.035419464,0.12696838,0.93091,0.79392314,-1.0292084,-0.041535165,1.0292084,"down","ARHGEF37",389337.0,"0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation","chr5:149010633-149014527 (+) // 68.02 // q32"]
["11764007_at",0.009072304,-0.036275387,-0.009072304,-0.06976938,0.14438105,0.031147003,0.7954987,0.4957014,-1.0333612,-0.047344614,1.0333612,"down","CDKL3",51265.0,"0006464 // cellular protein modification process // traceable author statement /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004693 // cyclin-dependent protein kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr5:133702266-133702844 (-) // 96.82 // q31.1"]
["11742015_at",-0.01611495,0.044005156,-0.22143006,0.032613993,-0.009028196,0.009028196,0.7434432,0.40604535,-1.0536419,-0.07538465,1.0536419,"down","C11orf34",349633.0,"","0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr11:112118875-112131583 (-) // 99.94 // q23.1"]
["11738505_at",0.09541464,0.05016184,-0.071686745,0.09541464,-0.08654976,-0.05016184,0.8630493,0.6343522,1.0269711,0.038395584,1.0269711,"up","KRTAP13-1",140258.0,"","0005882 // intermediate filament // inferred from electronic annotation","","chr21:31768294-31769136 (+) // 97.91 // q22.11"]
["11749374_a_at",0.026910782,6.580353E-4,0.020159721,-0.011030197,-6.580353E-4,-0.0119867325,0.3648192,0.051567316,1.0166346,0.023801213,1.0166346,"up","MSN",4478.0,"0006928 // cellular component movement // traceable author statement /// 0007159 // leukocyte cell-cell adhesion // inferred from expression pattern /// 0022614 // membrane to membrane docking // inferred from expression pattern /// 0050900 // leukocyte migration // inferred from expression pattern /// 2000401 // regulation of lymphocyte migration // inferred from mutant phenotype","0001931 // uropod // inferred from electronic annotation /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005902 // microvillus // inferred from direct assay /// 0005925 // focal adhesion // inferred from direct assay /// 0009898 // internal side of plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0019898 // extrinsic to membrane // inferred from electronic annotation /// 0030175 // filopodium // inferred from direct assay /// 0030667 // secretory granule membrane // inferred from electronic annotation /// 0031527 // filopodium membrane // inferred from electronic annotation /// 0031528 // microvillus membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from direct assay /// 0045177 // apical part of cell // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0005102 // receptor binding // inferred from physical interaction /// 0005200 // structural constituent of cytoskeleton // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008092 // cytoskeletal protein binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0050839 // cell adhesion molecule binding // inferred from physical interaction","chr5:25910370-25911588 (+) // 92.19 // p14.1 /// chrX:64953101-64960009 (+) // 95.27 // q12"]
["11723766_at",0.01402092,-0.018629074,0.04760933,-0.01402092,-0.059309006,0.07524204,0.92262536,0.7706816,1.0095388,0.013696316,1.0095388,"up","GFER",2671.0,"0006626 // protein targeting to mitochondrion // traceable author statement /// 0007283 // spermatogenesis // non-traceable author statement /// 0008283 // cell proliferation // non-traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005758 // mitochondrial intermembrane space // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016972 // thiol oxidase activity // inferred from electronic annotation","chr16:2033676-2037750 (+) // 84.07 // p13.3"]
["11743102_at",-0.017336845,-0.045495033,0.017336845,0.051631927,-0.06274986,0.0254488,0.8637089,0.63672256,-1.0139186,-0.019941889,1.0139186,"down","PTCD3",55037.0,"","0005739 // mitochondrion // inferred from electronic annotation","","chr2:86333345-86369280 (+) // 86.86 // p11.2"]
["11748232_a_at",-0.0054864883,0.0054864883,0.10454464,-0.029431343,0.00995636,-0.08865738,0.5780375,0.19209632,1.0503662,0.07089235,1.0503662,"up","DIS3",22894.0,"0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0006364 // rRNA processing // traceable author statement /// 0006364 // rRNA processing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0016075 // rRNA catabolic process // inferred from mutant phenotype /// 0043928 // exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay // traceable author statement /// 0071034 // CUT catabolic process // inferred from mutant phenotype /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation","0000176 // nuclear exosome (RNase complex) // inferred from direct assay /// 0000178 // exosome (RNase complex) // traceable author statement /// 0000178 // exosome (RNase complex) // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000175 // 3'-5'-exoribonuclease activity // inferred from mutant phenotype /// 0003723 // RNA binding // inferred from electronic annotation /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004519 // endonuclease activity // inferred from mutant phenotype /// 0004519 // endonuclease activity // inferred from electronic annotation /// 0004527 // exonuclease activity // inferred from electronic annotation /// 0004540 // ribonuclease activity // inferred from electronic annotation /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation","chr13:73333181-73356254 (-) // 98.38 // q22.1"]
["11739946_a_at",-0.032825947,0.20647001,-0.3365178,-0.25965738,0.098688126,0.032825947,0.98641634,0.9547807,-1.0080568,-0.011576873,1.0080568,"down","PKP1",5317.0,"0006915 // apoptotic process // traceable author statement /// 0006921 // cellular component disassembly involved in apoptotic process // traceable author statement /// 0007155 // cell adhesion // non-traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005882 // intermediate filament // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0030054 // cell junction // inferred from electronic annotation /// 0030057 // desmosome // non-traceable author statement /// 0030057 // desmosome // inferred from electronic annotation","0004871 // signal transducer activity // traceable author statement /// 0019215 // intermediate filament binding // non-traceable author statement /// 0030280 // structural constituent of epidermis // non-traceable author statement","chr1:201252579-201302115 (+) // 96.23 // q32.1"]
["11744521_x_at",0.055758476,0.08847141,0.16657639,-0.072909355,-0.055758476,-0.06586552,0.17659962,0.00714815,1.1238477,0.16844657,1.1238477,"up","USP39",10713.0,"0000245 // spliceosomal complex assembly // traceable author statement /// 0006397 // mRNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0004221 // ubiquitin thiolesterase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:85843300-85876403 (+) // 97.03 // p11.2"]
["11763080_at",-0.048882723,-0.051866055,-0.15245652,0.056325436,0.088977575,0.048882723,0.22885334,0.014612885,-1.1089008,-0.14913028,1.1089008,"down","","","0006955 // immune response // traceable author statement /// 0009887 // organ morphogenesis // traceable author statement","","","chr8:30274917-30275420 (+) // 68.29 // p12"]
["11723988_a_at",0.09666014,-0.15427399,-0.047782898,-0.010629654,0.010629654,0.100976944,0.76432526,0.440234,-1.0488375,-0.06879123,1.0488375,"down","NR2F2",7026.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001764 // neuron migration // inferred from electronic annotation /// 0001937 // negative regulation of endothelial cell proliferation // inferred from mutant phenotype /// 0001945 // lymph vessel development // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred by curator /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006629 // lipid metabolic process // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007519 // skeletal muscle tissue development // inferred from electronic annotation /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0009956 // radial pattern formation // inferred from electronic annotation /// 0010596 // negative regulation of endothelial cell migration // inferred from mutant phenotype /// 0030522 // intracellular receptor mediated signaling pathway // inferred from direct assay /// 0030522 // intracellular receptor mediated signaling pathway // traceable author statement /// 0030522 // intracellular receptor mediated signaling pathway // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation /// 0032355 // response to estradiol stimulus // inferred from electronic annotation /// 0043401 // steroid hormone mediated signaling pathway // inferred from electronic annotation /// 0045736 // negative regulation of cyclin-dependent protein kinase activity // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0048514 // blood vessel morphogenesis // inferred from electronic annotation /// 0060173 // limb development // inferred from electronic annotation /// 0060849 // regulation of transcription involved in lymphatic endothelial cell fate commitment // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0001972 // retinoic acid binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred by curator /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003707 // steroid hormone receptor activity // inferred from electronic annotation /// 0003714 // transcription corepressor activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0004879 // ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from direct assay /// 0004879 // ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from electronic annotation /// 0004879 // ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr15:96873745-96883489 (+) // 89.47 // q26.2"]
["11740083_x_at",0.027681828,-0.05450797,0.06964493,-0.027681828,0.09435296,-0.093791485,0.90990365,0.74203336,1.0162907,0.023313079,1.0162907,"up","AGMO",392636.0,"0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0006643 // membrane lipid metabolic process // inferred from direct assay /// 0046485 // ether lipid metabolic process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005506 // iron ion binding // inferred from mutant phenotype /// 0005506 // iron ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0050479 // glyceryl-ether monooxygenase activity // inferred from direct assay /// 0050479 // glyceryl-ether monooxygenase activity // inferred from electronic annotation","chr7:15239942-15601640 (-) // 87.84 // p21.2"]
["11747955_a_at",0.019189835,-0.035423756,0.23806858,-0.019189835,-0.06893349,0.09569025,0.7987897,0.50131553,1.0507523,0.07142259,1.0507523,"up","PDZD3",79849.0,"0006811 // ion transport // non-traceable author statement /// 0006833 // water transport // non-traceable author statement /// 0007168 // receptor guanylyl cyclase signaling pathway // inferred by curator /// 0009636 // response to toxin // traceable author statement /// 0019934 // cGMP-mediated signaling // non-traceable author statement /// 0030827 // negative regulation of cGMP biosynthetic process // traceable author statement /// 0031283 // negative regulation of guanylate cyclase activity // inferred from direct assay","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005903 // brush border // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0035003 // subapical complex // inferred from direct assay /// 0045177 // apical part of cell // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0008200 // ion channel inhibitor activity // traceable author statement /// 0030251 // guanylate cyclase inhibitor activity // inferred from direct assay","chr11:119056182-119060201 (+) // 100.0 // q23.3"]
["11717426_a_at",-0.008358002,-0.06590176,-0.021417618,0.008358002,0.06935501,0.017058372,0.4062695,0.06972828,-1.0449855,-0.06348297,1.0449855,"down","CHMP3 /// RNF103-CHMP3","100526767 /// 51652","0000910 // cytokinesis // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0008333 // endosome to lysosome transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016044 // cellular membrane organization // traceable author statement /// 0016197 // endosomal transport // traceable author statement /// 0051036 // regulation of endosome size // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030496 // midbody // inferred from electronic annotation /// 0031902 // late endosome membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0005546 // phosphatidylinositol-4,5-bisphosphate binding // inferred from electronic annotation","chr2:86731061-86790620 (-) // 61.91 // p11.2"]
["11753134_a_at",0.19037127,-0.05999589,-0.050917387,-0.040576935,0.040576935,0.2352469,0.8825125,0.67716044,-1.0366505,-0.051929634,1.0366505,"down","SGK2",10110.0,"0001558 // regulation of cell growth // traceable author statement /// 0006468 // protein phosphorylation // non-traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0006979 // response to oxidative stress // traceable author statement /// 0007243 // intracellular protein kinase cascade // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0032411 // positive regulation of transporter activity // traceable author statement /// 0042127 // regulation of cell proliferation // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0015459 // potassium channel regulator activity // inferred from direct assay /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0017080 // sodium channel regulator activity // non-traceable author statement /// 0017080 // sodium channel regulator activity // traceable author statement","chr20:42194955-42213656 (+) // 99.83 // q13.12"]
["11761878_at",-0.110121965,-0.09923005,0.041321754,9.3245506E-4,0.18455338,-9.326935E-4,0.5946432,0.20871903,-1.0848743,-0.11752786,1.0848743,"down","PARD3B",117583.0,"0007049 // cell cycle // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0005923 // tight junction // inferred from electronic annotation /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","","chr2:205410515-205913318 (+) // 84.98 // q33.3"]
["11748292_a_at",-0.05351925,-0.069363594,-0.061769485,0.13434601,0.05351925,0.10116196,0.12395789,0.002720323,-1.1156567,-0.15789321,1.1156567,"down","GBA /// GBAP1","2629 /// 2630","0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006665 // sphingolipid metabolic process // traceable author statement /// 0006665 // sphingolipid metabolic process // inferred from electronic annotation /// 0006680 // glucosylceramide catabolic process // inferred from mutant phenotype /// 0006687 // glycosphingolipid metabolic process // traceable author statement /// 0007040 // lysosome organization // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0023021 // termination of signal transduction // inferred from mutant phenotype /// 0032715 // negative regulation of interleukin-6 production // inferred from direct assay /// 0035307 // positive regulation of protein dephosphorylation // inferred from mutant phenotype /// 0043407 // negative regulation of MAP kinase activity // inferred from mutant phenotype /// 0044281 // small molecule metabolic process // traceable author statement /// 0046512 // sphingosine biosynthetic process // inferred from mutant phenotype /// 0046513 // ceramide biosynthetic process // inferred from mutant phenotype /// 0050728 // negative regulation of inflammatory response // inferred by curator /// 0071356 // cellular response to tumor necrosis factor // inferred from mutant phenotype","0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from sequence or structural similarity /// 0005765 // lysosomal membrane // traceable author statement /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0043202 // lysosomal lumen // inferred from sequence or structural similarity /// 0043202 // lysosomal lumen // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004348 // glucosylceramidase activity // inferred from direct assay /// 0004348 // glucosylceramidase activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from sequence or structural similarity /// 0005102 // receptor binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity, acting on glycosyl bonds // inferred from electronic annotation /// 0043169 // cation binding // inferred from electronic annotation","chr1:155184064-155188796 (-) // 99.61 // q22"]
["11743339_s_at",4.2915344E-6,-4.2915344E-6,0.11925793,0.0411067,-0.012261391,-0.026140213,0.760783,0.43405682,1.0272954,0.03885102,1.0272954,"up","MFSD11",79157.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr17:74733582-74775336 (+) // 82.75 // q25.1"]
["11742916_x_at",0.004852295,-0.004852295,-0.22682953,0.04932165,0.014921665,-0.060979366,0.74225825,0.40454164,-1.0546014,-0.076697856,1.0546014,"down","LMTK2",22853.0,"0001881 // receptor recycling // inferred from mutant phenotype /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from direct assay /// 0018107 // peptidyl-threonine phosphorylation // inferred from direct assay /// 0032456 // endocytic recycling // inferred from mutant phenotype /// 0033572 // transferrin transport // inferred from mutant phenotype /// 0045022 // early endosome to late endosome transport // inferred from mutant phenotype /// 0046777 // protein autophosphorylation // inferred from direct assay","0005769 // early endosome // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0055037 // recycling endosome // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004864 // protein phosphatase inhibitor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // non-traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0070853 // myosin VI binding // inferred from physical interaction","chr7:97736168-97835878 (+) // 99.02 // q21.3"]
["11756226_a_at",0.069643974,-0.036283016,-0.016285896,0.016285896,-0.05177784,0.12776613,0.89387923,0.70489633,-1.0175265,-0.025066378,1.0175265,"down","GRIPAP1",56850.0,"","0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation","","chrX:48830135-48845036 (-) // 87.54 // p11.23"]
["11760143_at",0.25940466,-0.03489065,-0.27414322,-1.1301041E-4,1.1301041E-4,0.25276136,0.8463226,0.5970948,-1.0723656,-0.1007969,1.0723656,"down","HLA-F",3134.0,"0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // inferred from electronic annotation /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0002480 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-independent // traceable author statement /// 0006955 // immune response // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0019882 // antigen processing and presentation // inferred from electronic annotation /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0050776 // regulation of immune response // traceable author statement /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060337 // type I interferon-mediated signaling pathway // traceable author statement","0000139 // Golgi membrane // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0012507 // ER to Golgi transport vesicle membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030670 // phagocytic vesicle membrane // traceable author statement /// 0031901 // early endosome membrane // traceable author statement /// 0042612 // MHC class I protein complex // inferred from electronic annotation /// 0071556 // integral to lumenal side of endoplasmic reticulum membrane // traceable author statement","0032393 // MHC class I receptor activity // traceable author statement","chr6:29691170-29694301 (+) // 97.41 // p22.1"]

{"sheet":"Diff Genes Number","index":2,"n_rows":3,"n_cols":4,"rows_kept":3,"cut":false,"hidden":false,"merged":[]}
[]
["NO","Comparison","Up-regulated","Down-regulated"]
[1.0,"KD vs NC",37.0,19.0]

{"sheet":"Differential Data","index":3,"n_rows":58,"n_cols":19,"rows_kept":58,"cut":false,"hidden":false,"merged":[[0,1,0,3],[0,4,0,6],[0,7,0,8],[0,9,0,12],[0,13,0,18]]}
["Probe","KD","KD","KD","NC","NC","NC","P-value","P-value","Fold change","Fold change","Fold change","Fold change","Annotation","Annotation","Annotation","Annotation","Annotation","Annotation"]
["probeSet","E1853-1_(PrimeView).CEL","E1853-2_(PrimeView).CEL","E1853-3_(PrimeView).CEL","E1852-1_(PrimeView).CEL","E1852-2_(PrimeView).CEL","E1852-3_(PrimeView).CEL","Corrected p-value","P-value","Fold change","Log Fold change","Absolute Fold change","Regulation","Gene Symbol","Entrez Gene","Gene Ontology Biological Process","Gene Ontology Cellular Component","Gene Ontology Molecular Function","Alignments"]
["11759321_a_at",0.16639733,0.14187622,0.16639733,-0.14187622,-0.31881595,-0.2512405,0.0035495067,0.0016259721,1.31543,0.39553452,1.31543,"up","MPZL3",196264.0,"0007155 // cell adhesion // inferred from electronic annotation /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0042633 // hair cycle // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr11:118097410-118123083 (-) // 91.23 // q23.3"]
["11717903_s_at",0.23975754,0.19050694,0.3509121,-0.27492046,-0.19050694,-0.21697998,0.0024703806,8.075217E-4,1.4023645,0.48786134,1.4023645,"up","IER3IP1",51124.0,"0042981 // regulation of apoptotic process // inferred from mutant phenotype","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr18:44681412-44702735 (-) // 93.75 // q21.1"]
["11723069_at",-0.2599516,-0.2932148,-0.3253951,0.28524017,0.2599516,0.37149143,0.0014257188,1.0198572E-4,-1.5140522,-0.5984149,1.5140522,"down","GABBR1","10537 /// 2550","0001649 // osteoblast differentiation // inferred from electronic annotation /// 0006508 // proteolysis // non-traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007194 // negative regulation of adenylate cyclase activity // inferred from electronic annotation /// 0007194 // negative regulation of adenylate cyclase activity // traceable author statement /// 0007214 // gamma-aminobutyric acid signaling pathway // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0014048 // regulation of glutamate secretion // inferred from electronic annotation /// 0014053 // negative regulation of gamma-aminobutyric acid secretion // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from direct assay /// 0030817 // regulation of cAMP biosynthetic process // inferred from electronic annotation /// 0032446 // protein modification by small protein conjugation // non-traceable author statement /// 0032811 // negative regulation of epinephrine secretion // inferred from electronic annotation /// 0033602 // negative regulation of dopamine secretion // inferred from electronic annotation /// 0034341 // response to interferon-gamma // inferred from expression pattern /// 0034612 // response to tumor necrosis factor // inferred from expression pattern /// 0035094 // response to nicotine // inferred from electronic annotation /// 0035417 // negative regulation of mitotic prometaphase // inferred from mutant phenotype /// 0043011 // myeloid dendritic cell differentiation // inferred from mutant phenotype /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from mutant phenotype /// 0045471 // response to ethanol // inferred from electronic annotation /// 0050805 // negative regulation of synaptic transmission // inferred from electronic annotation /// 0060124 // positive regulation of growth hormone secretion // inferred from electronic annotation /// 0070842 // aggresome assembly // inferred from direct assay","0005576 // extracellular region // inferred from electronic annotation /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016235 // aggresome // inferred from direct assay /// 0019717 // synaptosome // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030673 // axolemma // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from electronic annotation /// 0043198 // dendritic shaft // inferred from electronic annotation /// 0045121 // membrane raft // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004965 // G-protein coupled GABA receptor activity // inferred from electronic annotation /// 0004965 // G-protein coupled GABA receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0070628 // proteasome binding // inferred from direct assay","chr6:29523318-29527702 (-) // 98.04 // p22.1"]
["11720837_a_at",0.30883455,0.15040493,0.31174755,-0.15040493,-0.18255568,-0.21654797,0.0033463445,0.0014760602,1.3567597,0.44016522,1.3567597,"up","HIRA",7290.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0007369 // gastrulation // inferred from electronic annotation /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0016568 // chromatin modification // inferred from electronic annotation","0000790 // nuclear chromatin // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0016605 // PML body // inferred from electronic annotation","0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003714 // transcription corepressor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr22:19318220-19419247 (-) // 94.4 // q11.21"]
["11745181_a_at",0.22208118,0.18778896,0.34674835,-0.24672127,-0.18778896,-0.22202396,0.0024703806,7.771054E-4,1.3861188,0.47105092,1.3861188,"up","NAA15",80155.0,"0001525 // angiogenesis // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006474 // N-terminal protein amino acid acetylation // inferred from direct assay /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008080 // N-acetyltransferase activity // inferred from electronic annotation /// 0016407 // acetyltransferase activity // inferred from direct assay /// 0043022 // ribosome binding // inferred from direct assay","chr4:140222654-140310342 (+) // 91.62 // q31.1"]
["11757588_a_at",0.23656654,0.20769215,0.22189426,-0.20769215,-0.24055195,-0.25091362,8.554759E-4,7.942611E-6,1.3708812,0.45510355,1.3708812,"up","ALG5",29880.0,"0006486 // protein glycosylation // traceable author statement /// 0006486 // protein glycosylation // inferred from electronic annotation /// 0006488 // dolichol-linked oligosaccharide biosynthetic process // traceable author statement /// 0007368 // determination of left/right symmetry // inferred from electronic annotation /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004576 // oligosaccharyl transferase activity // traceable author statement /// 0004581 // dolichyl-phosphate beta-glucosyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation","chr13:37523980-37527163 (-) // 95.54 // q13.3"]
["11757900_a_at",-0.21063232,-0.31124544,-0.20716095,0.27769518,0.20716143,0.26559734,0.0017681847,2.6071045E-4,-1.4075285,-0.4931642,1.4075285,"down","VTN","645832 /// 7448","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006955 // immune response // inferred from electronic annotation /// 0006955 // immune response // traceable author statement /// 0007155 // cell adhesion // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007160 // cell-matrix adhesion // inferred from direct assay /// 0007160 // cell-matrix adhesion // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0010811 // positive regulation of cell-substrate adhesion // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // inferred from direct assay /// 0014911 // positive regulation of smooth muscle cell migration // inferred from direct assay /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030195 // negative regulation of blood coagulation // inferred by curator /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0030949 // positive regulation of vascular endothelial growth factor receptor signaling pathway // traceable author statement /// 0032092 // positive regulation of protein binding // inferred from direct assay /// 0033627 // cell adhesion mediated by integrin // inferred from direct assay /// 0048260 // positive regulation of receptor-mediated endocytosis // inferred from direct assay /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0061302 // smooth muscle cell-matrix adhesion // inferred from direct assay /// 0090303 // positive regulation of wound healing // inferred by curator","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from sequence or structural similarity /// 0071062 // alphav-beta3 integrin-vitronectin complex // traceable author statement","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005044 // scavenger receptor activity // inferred from electronic annotation /// 0005178 // integrin binding // inferred from physical interaction /// 0008201 // heparin binding // inferred from electronic annotation /// 0030247 // polysaccharide binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050840 // extracellular matrix binding // inferred from electronic annotation","chr17:26694305-26694974 (-) // 96.45 // q11.2"]
["11739456_at",0.22416687,0.15196991,0.25693178,-0.15197039,-0.19641972,-0.24336958,0.0022862386,5.5595266E-4,1.3270991,0.40827608,1.3270991,"up","SGMS1",259230.0,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0006665 // sphingolipid metabolic process // traceable author statement /// 0006665 // sphingolipid metabolic process // inferred from electronic annotation /// 0006686 // sphingomyelin biosynthetic process // inferred from direct assay /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0016049 // cell growth // inferred from direct assay /// 0016049 // cell growth // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030148 // sphingolipid biosynthetic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0071222 // cellular response to lipopolysaccharide // inferred from electronic annotation /// 0071356 // cellular response to tumor necrosis factor // inferred from electronic annotation","0000138 // Golgi trans cisterna // inferred from direct assay /// 0000139 // Golgi membrane // traceable author statement /// 0000139 // Golgi membrane // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030173 // integral to Golgi membrane // inferred from direct assay","0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0033188 // sphingomyelin synthase activity // inferred from mutant phenotype /// 0033188 // sphingomyelin synthase activity // inferred from electronic annotation /// 0047493 // ceramide cholinephosphotransferase activity // inferred from direct assay","chr10:52065359-52383737 (-) // 98.65 // q11.23"]
["11723110_at",0.1765461,0.23343563,0.247962,-0.1765461,-0.19718361,-0.22890472,0.0014009658,9.3620074E-5,1.3381063,0.42019272,1.3381063,"up","PLEKHB2",55041.0,"","0005768 // endosome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0055038 // recycling endosome membrane // inferred from electronic annotation","0005543 // phospholipid binding // inferred from electronic annotation","chr2:131862419-131907418 (+) // 83.36 // q21.1"]
["11732322_at",0.1935463,0.19118595,0.17550564,-0.17550564,-0.21529675,-0.24654484,0.0012374767,4.791841E-5,1.3187718,0.39919502,1.3187718,"up","FXN",2395.0,"0006119 // oxidative phosphorylation // inferred from electronic annotation /// 0006783 // heme biosynthetic process // non-traceable author statement /// 0006783 // heme biosynthetic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // inferred from mutant phenotype /// 0006879 // cellular iron ion homeostasis // inferred from electronic annotation /// 0007005 // mitochondrion organization // inferred from electronic annotation /// 0007628 // adult walking behavior // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0009060 // aerobic respiration // inferred from electronic annotation /// 0009792 // embryo development ending in birth or egg hatching // inferred from electronic annotation /// 0010039 // response to iron ion // inferred from mutant phenotype /// 0010722 // regulation of ferrochelatase activity // inferred from direct assay /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0016226 // iron-sulfur cluster assembly // inferred from electronic annotation /// 0016540 // protein autoprocessing // inferred from direct assay /// 0018283 // iron incorporation into metallo-sulfur cluster // inferred from direct assay /// 0019230 // proprioception // inferred from electronic annotation /// 0030307 // positive regulation of cell growth // inferred from mutant phenotype /// 0040015 // negative regulation of multicellular organism growth // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0045773 // positive regulation of axon extension // inferred from electronic annotation /// 0046621 // negative regulation of organ growth // inferred from electronic annotation /// 0048554 // positive regulation of metalloenzyme activity // inferred from mutant phenotype /// 0051347 // positive regulation of transferase activity // inferred from mutant phenotype /// 0051349 // positive regulation of lyase activity // inferred from direct assay /// 0051349 // positive regulation of lyase activity // inferred from mutant phenotype /// 0051353 // positive regulation of oxidoreductase activity // inferred from mutant phenotype /// 0055072 // iron ion homeostasis // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0070301 // cellular response to hydrogen peroxide // inferred from direct assay /// 0090201 // negative regulation of release of cytochrome c from mitochondria // inferred from mutant phenotype","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // inferred from sequence or structural similarity /// 0005759 // mitochondrial matrix // non-traceable author statement /// 0005829 // cytosol // inferred from direct assay","0004322 // ferroxidase activity // inferred from direct assay /// 0004322 // ferroxidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008198 // ferrous iron binding // inferred from direct assay /// 0008199 // ferric iron binding // inferred from direct assay /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from electronic annotation /// 0034986 // iron chaperone activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from direct assay /// 0051537 // 2 iron, 2 sulfur cluster binding // inferred from direct assay","chr9:71650174-71689099 (+) // 73.82 // q21.11"]
["11739910_a_at",0.36175728,0.2907958,0.36175728,-0.5721917,-0.29079628,-0.44847345,0.0024703806,7.9428684E-4,1.7114952,0.77525723,1.7114952,"up","ELOVL6",79071.0,"0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0019367 // fatty acid elongation, saturated fatty acid // inferred from direct assay /// 0019367 // fatty acid elongation, saturated fatty acid // inferred from electronic annotation /// 0019432 // triglyceride biosynthetic process // traceable author statement /// 0030497 // fatty acid elongation // inferred from electronic annotation /// 0034625 // fatty acid elongation, monounsaturated fatty acid // inferred from electronic annotation /// 0035338 // long-chain fatty-acyl-CoA biosynthetic process // traceable author statement /// 0042759 // long-chain fatty acid biosynthetic process // inferred from direct assay /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030176 // integral to endoplasmic reticulum membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0009922 // fatty acid elongase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016747 // transferase activity, transferring acyl groups other than amino-acyl groups // inferred from electronic annotation","chr4:110970228-111120139 (-) // 99.32 // q25"]
["11726479_a_at",-0.1962552,-0.20418167,-0.6599922,0.27396107,0.24320602,0.1962552,0.021648686,0.018835938,-1.5065868,-0.5912838,1.5065868,"down","MX2",4600.0,"0006184 // GTP catabolic process // traceable author statement /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006952 // defense response // traceable author statement /// 0009615 // response to virus // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0060337 // type I interferon-mediated signaling pathway // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0005525 // GTP binding // inferred from electronic annotation","chr21:42741816-42780869 (+) // 91.78 // q22.3"]
["11748854_a_at",0.3380847,0.29126072,0.26908493,-0.26908493,-0.43755388,-0.37887716,0.0017433804,2.4432776E-4,1.581524,0.66131544,1.581524,"up","RPUSD4",84881.0,"0001522 // pseudouridine synthesis // inferred from electronic annotation /// 0009451 // RNA modification // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0009982 // pseudouridine synthase activity // inferred from electronic annotation","chr11:126072693-126075676 (-) // 88.95 // q24.2"]
["11722980_a_at",-0.14675832,-0.22550821,-0.38666677,0.20170355,0.14675808,0.24204636,0.006377894,0.004044949,-1.3658639,-0.44981375,1.3658639,"down","F8",2157.0,"0002576 // platelet degranulation // traceable author statement /// 0006953 // acute-phase response // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0007596 // blood coagulation // inferred from electronic annotation /// 0007597 // blood coagulation, intrinsic pathway // traceable author statement /// 0007599 // hemostasis // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0030168 // platelet activation // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0031093 // platelet alpha granule lumen // traceable author statement","0005507 // copper ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chrX:154064062-154114725 (-) // 81.39 // q28"]
["11716197_a_at",0.1472969,0.13480997,0.3318901,-0.19756365,-0.21033955,-0.13480997,0.0071678963,0.004734997,1.3063759,0.38557005,1.3063759,"up","ADIPOR2",79602.0,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0009755 // hormone-mediated signaling pathway // inferred from sequence or structural similarity /// 0019395 // fatty acid oxidation // inferred from sequence or structural similarity","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0042562 // hormone binding // inferred from sequence or structural similarity /// 0042802 // identical protein binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr12:1800188-1897845 (+) // 96.29 // p13.33"]
["11731580_x_at",0.28880024,0.25206757,0.32494545,-0.40004635,-0.25206757,-0.42989826,0.002040057,3.8418593E-4,1.56838,0.6492751,1.56838,"up","KCTD20",222658.0,"0051260 // protein homooligomerization // inferred from electronic annotation","","0005216 // ion channel activity // inferred from electronic annotation","chr6:36410543-36458918 (+) // 85.4 // p21.31"]
["11742883_at",-0.14328241,-0.30030298,-0.44424915,0.21709108,0.14328241,0.20075321,0.008326622,0.005761779,-1.3976345,-0.48298708,1.3976345,"down","ST6GALNAC2",10610.0,"0006486 // protein glycosylation // inferred from electronic annotation /// 0016266 // O-glycan processing // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0000139 // Golgi membrane // traceable author statement /// 0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030173 // integral to Golgi membrane // inferred from electronic annotation","0008373 // sialyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation","chr17:74561428-74582320 (-) // 97.08 // q25.1"]
["11723420_s_at",0.28074455,0.3255844,0.29459667,-0.28074408,-0.3669157,-0.32832193,0.001120038,2.4526378E-5,1.5428907,0.6256358,1.5428907,"up","BTF3L4",91408.0,"","","","chr1:52521801-52554585 (+) // 87.15 // p32.3"]
["11725208_at",0.45690393,0.27616072,0.18219233,-0.21491194,-0.24925995,-0.18219185,0.0055084573,0.0032849705,1.4344923,0.52054024,1.4344923,"up","LETM1",3954.0,"0042407 // cristae formation // inferred from mutant phenotype","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from direct assay /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation /// 0005509 // calcium ion binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr4:1809542-1857974 (-) // 88.79 // p16.3"]
["11736931_s_at",0.119460106,0.10198307,0.13511181,-0.3461132,-0.38084316,-0.10198307,0.013765996,0.011012797,1.315093,0.39516482,1.315093,"up","FAM72A","653820 /// 728833 /// 729533","","","","chr1:206138454-206155147 (+) // 96.15 // q32.1 /// chr1:120838982-120855680 (+) // 95.74 // p11.2 /// chr1:143896451-143913145 (-) // 95.7 // q21.1"]
["11736931_s_at",0.119460106,0.10198307,0.13511181,-0.3461132,-0.38084316,-0.10198307,0.013765996,0.011012797,1.315093,0.39516482,1.315093,"up","FAM72B","653820 /// 728833 /// 729533","","","","chr1:206138454-206155147 (+) // 96.15 // q32.1 /// chr1:120838982-120855680 (+) // 95.74 // p11.2 /// chr1:143896451-143913145 (-) // 95.7 // q21.1"]
["11715521_a_at",0.24922562,0.19059753,0.19611168,-0.35408115,-0.24324226,-0.19059753,0.0024703806,7.8063627E-4,1.3895508,0.4746186,1.3895508,"up","MLEC",9761.0,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006457 // protein folding // traceable author statement /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0030246 // carbohydrate binding // inferred from sequence or structural similarity","chr12:121124948-121139662 (+) // 92.78 // q24.31"]
["11755257_a_at",-0.22696686,-0.22458124,-0.4160986,0.36122513,0.22458076,0.3133936,0.003280011,0.0014222064,-1.5041503,-0.5889487,1.5041503,"down","TRIM31",11074.0,"0016567 // protein ubiquitination // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:30070676-30073430 (-) // 83.81 // p22.1"]
["11736931_s_at",0.119460106,0.10198307,0.13511181,-0.3461132,-0.38084316,-0.10198307,0.013765996,0.011012797,1.315093,0.39516482,1.315093,"up","FAM72D","653820 /// 728833 /// 729533","","","","chr1:206138454-206155147 (+) // 96.15 // q32.1 /// chr1:120838982-120855680 (+) // 95.74 // p11.2 /// chr1:143896451-143913145 (-) // 95.7 // q21.1"]
["11723069_at",-0.2599516,-0.2932148,-0.3253951,0.28524017,0.2599516,0.37149143,0.0014257188,1.0198572E-4,-1.5140522,-0.5984149,1.5140522,"down","UBD","10537 /// 2550","0001649 // osteoblast differentiation // inferred from electronic annotation /// 0006508 // proteolysis // non-traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007194 // negative regulation of adenylate cyclase activity // inferred from electronic annotation /// 0007194 // negative regulation of adenylate cyclase activity // traceable author statement /// 0007214 // gamma-aminobutyric acid signaling pathway // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0014048 // regulation of glutamate secretion // inferred from electronic annotation /// 0014053 // negative regulation of gamma-aminobutyric acid secretion // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from direct assay /// 0030817 // regulation of cAMP biosynthetic process // inferred from electronic annotation /// 0032446 // protein modification by small protein conjugation // non-traceable author statement /// 0032811 // negative regulation of epinephrine secretion // inferred from electronic annotation /// 0033602 // negative regulation of dopamine secretion // inferred from electronic annotation /// 0034341 // response to interferon-gamma // inferred from expression pattern /// 0034612 // response to tumor necrosis factor // inferred from expression pattern /// 0035094 // response to nicotine // inferred from electronic annotation /// 0035417 // negative regulation of mitotic prometaphase // inferred from mutant phenotype /// 0043011 // myeloid dendritic cell differentiation // inferred from mutant phenotype /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from mutant phenotype /// 0045471 // response to ethanol // inferred from electronic annotation /// 0050805 // negative regulation of synaptic transmission // inferred from electronic annotation /// 0060124 // positive regulation of growth hormone secretion // inferred from electronic annotation /// 0070842 // aggresome assembly // inferred from direct assay","0005576 // extracellular region // inferred from electronic annotation /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016235 // aggresome // inferred from direct assay /// 0019717 // synaptosome // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030673 // axolemma // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from electronic annotation /// 0043198 // dendritic shaft // inferred from electronic annotation /// 0045121 // membrane raft // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004965 // G-protein coupled GABA receptor activity // inferred from electronic annotation /// 0004965 // G-protein coupled GABA receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0070628 // proteasome binding // inferred from direct assay","chr6:29523318-29527702 (-) // 98.04 // p22.1"]
["11740489_at",0.35065317,0.21882486,0.31450367,-0.21882534,-0.21970463,-0.437397,0.004105283,0.0020823812,1.5017412,0.5866362,1.5017412,"up","MAPK9",5601.0,"0000165 // MAPK cascade // inferred from electronic annotation /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006950 // response to stress // traceable author statement /// 0007254 // JNK cascade // inferred from direct assay /// 0007254 // JNK cascade // traceable author statement /// 0007258 // JUN phosphorylation // inferred from direct assay /// 0008063 // Toll signaling pathway // traceable author statement /// 0010628 // positive regulation of gene expression // inferred from mutant phenotype /// 0010744 // positive regulation of macrophage derived foam cell differentiation // inferred from mutant phenotype /// 0016310 // phosphorylation // inferred from electronic annotation /// 0031558 // induction of apoptosis in response to chemical stimulus // inferred from electronic annotation /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0046686 // response to cadmium ion // inferred from electronic annotation /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // traceable author statement /// 0051403 // stress-activated MAPK cascade // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004705 // JUN kinase activity // inferred from direct assay /// 0004707 // MAP kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from direct assay /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr5:179673021-179719071 (-) // 95.9 // q35.3"]
["11724644_at",0.4510684,0.052011013,0.46045446,-0.06365633,-0.052011013,-0.08020115,0.04786657,0.04566541,1.3071887,0.38646746,1.3071887,"up","SPOPL",339745.0,"0016567 // protein ubiquitination // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","","chr2:139259349-139331117 (+) // 96.93 // q22.1"]
["11720306_at",0.37876034,0.33269787,0.37535763,-0.36583996,-0.33269787,-0.39251614,8.554759E-4,5.780219E-6,1.653997,0.72595656,1.653997,"up","SERP1",27230.0,"0001501 // skeletal system development // inferred from electronic annotation /// 0006006 // glucose metabolic process // inferred from electronic annotation /// 0006464 // cellular protein modification process // traceable author statement /// 0006486 // protein glycosylation // inferred from electronic annotation /// 0006486 // protein glycosylation // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006950 // response to stress // traceable author statement /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0007009 // plasma membrane organization // traceable author statement /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0010259 // multicellular organismal aging // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0030968 // endoplasmic reticulum unfolded protein response // inferred from electronic annotation /// 0032024 // positive regulation of insulin secretion // inferred from electronic annotation /// 0045727 // positive regulation of translation // inferred from electronic annotation /// 0046622 // positive regulation of organ growth // inferred from electronic annotation /// 0048644 // muscle organ morphogenesis // inferred from electronic annotation /// 0060124 // positive regulation of growth hormone secretion // inferred from electronic annotation","0005783 // endoplasmic reticulum // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005840 // ribosome // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr3:150259779-150264712 (-) // 98.88 // q25.1"]
["11760003_x_at",0.1478796,0.20888805,0.1852355,-0.21284676,-0.1478796,-0.24594784,0.0019126503,3.476998E-4,1.3039535,0.38289243,1.3039535,"up","ING5",84289.0,"0006260 // DNA replication // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006473 // protein acetylation // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0016568 // chromatin modification // inferred from electronic annotation /// 0043966 // histone H3 acetylation // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045926 // negative regulation of growth // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0070776 // MOZ/MORF histone acetyltransferase complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0035064 // methylated histone residue binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:242641460-242662686 (+) // 67.36 // q37.3"]
["11733254_a_at",-0.15568018,-0.18091822,-0.2554407,0.20670033,0.20477962,0.15568066,0.0019126503,3.5321206E-4,-1.3071276,-0.38639992,1.3071276,"down","FXYD3",5349.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006821 // chloride transport // traceable author statement /// 0006821 // chloride transport // inferred from electronic annotation /// 0050790 // regulation of catalytic activity // inferred from electronic annotation","0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0034707 // chloride channel complex // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005254 // chloride channel activity // inferred from electronic annotation /// 0005254 // chloride channel activity // traceable author statement /// 0051117 // ATPase binding // inferred from electronic annotation","chr19:35606533-35615226 (+) // 93.17 // q13.12"]
["11748926_a_at",0.19191742,0.22480106,0.2289319,-0.2636075,-0.32719088,-0.1919179,0.0018511375,3.0800235E-4,1.3909998,0.4761222,1.3909998,"up","GANAB",23193.0,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006457 // protein folding // traceable author statement /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008277 // regulation of G-protein coupled receptor protein signaling pathway // inferred from electronic annotation /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004553 // hydrolase activity, hydrolyzing O-glycosyl compounds // inferred from electronic annotation /// 0008565 // protein transporter activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity, acting on glycosyl bonds // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation /// 0033919 // glucan 1,3-alpha-glucosidase activity // inferred from electronic annotation","chr11:62392903-62407205 (-) // 89.75 // q12.3"]
["11720410_s_at",-0.18877697,-0.24790478,-0.15956497,0.15956497,0.20675468,0.17985058,0.0016611826,2.0385014E-4,-1.3020687,-0.38080564,1.3020687,"down","CYP1B1",1545.0,"0001525 // angiogenesis // inferred from electronic annotation /// 0006725 // cellular aromatic compound metabolic process // inferred from electronic annotation /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0007601 // visual perception // traceable author statement /// 0008210 // estrogen metabolic process // inferred from electronic annotation /// 0009404 // toxin metabolic process // inferred from electronic annotation /// 0009636 // response to toxin // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0043542 // endothelial cell migration // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0061298 // retina vasculature development in camera-type eye // inferred from electronic annotation /// 0071603 // endothelial cell-cell adhesion // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0004497 // monooxygenase activity // traceable author statement /// 0004497 // monooxygenase activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from electronic annotation /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016705 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen // inferred from electronic annotation /// 0016712 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen // inferred from direct assay /// 0016712 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen // inferred from electronic annotation /// 0019825 // oxygen binding // traceable author statement /// 0020037 // heme binding // traceable author statement /// 0020037 // heme binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070330 // aromatase activity // inferred from electronic annotation","chr2:38294650-38303323 (-) // 99.15 // p22.2"]
["11726778_at",-0.21202898,-0.16837883,-0.1578474,0.24326658,0.15784693,0.29811335,0.0024703806,7.245076E-4,-1.3309847,-0.412494,1.3309847,"down","OAS2",4939.0,"0006139 // nucleobase-containing compound metabolic process // traceable author statement /// 0006164 // purine nucleotide biosynthetic process // inferred from direct assay /// 0006401 // RNA catabolic process // inferred from electronic annotation /// 0006486 // protein glycosylation // inferred from direct assay /// 0006955 // immune response // inferred from electronic annotation /// 0009615 // response to virus // traceable author statement /// 0018377 // protein myristoylation // inferred from mutant phenotype /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060337 // type I interferon-mediated signaling pathway // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005792 // microsome // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // traceable author statement /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0001730 // 2'-5'-oligoadenylate synthetase activity // inferred from direct assay /// 0001730 // 2'-5'-oligoadenylate synthetase activity // inferred from mutant phenotype /// 0001730 // 2'-5'-oligoadenylate synthetase activity // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003725 // double-stranded RNA binding // inferred from direct assay /// 0003725 // double-stranded RNA binding // inferred from mutant phenotype /// 0005524 // ATP binding // inferred from mutant phenotype /// 0005524 // ATP binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation /// 0016779 // nucleotidyltransferase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:113416273-113426700 (+) // 68.66 // q24.13"]
["11725861_a_at",0.17620087,0.19813061,0.32869816,-0.22232151,-0.23146057,-0.17620087,0.002621334,9.2591473E-4,1.3606892,0.44433755,1.3606892,"up","MYBL1",4603.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // non-traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation","chr8:67474410-67525484 (-) // 97.22 // q13.1"]
["11741252_a_at",0.31635284,0.3018198,0.39657784,-0.3018198,-0.33779716,-0.33814716,0.0011720356,3.1184394E-5,1.584658,0.6641716,1.584658,"up","RCC1",1104.0,"0000082 // G1/S transition of mitotic cell cycle // inferred from mutant phenotype /// 0007049 // cell cycle // inferred from electronic annotation /// 0007052 // mitotic spindle organization // inferred from direct assay /// 0007059 // chromosome segregation // inferred from mutant phenotype /// 0007067 // mitosis // inferred from electronic annotation /// 0007088 // regulation of mitosis // inferred from direct assay /// 0007090 // regulation of S phase of mitotic cell cycle // inferred from mutant phenotype /// 0016032 // viral reproduction // traceable author statement /// 0051225 // spindle assembly // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation","0000790 // nuclear chromatin // inferred from direct assay /// 0000794 // condensed nuclear chromosome // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from direct assay /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005087 // Ran guanyl-nucleotide exchange factor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0031492 // nucleosomal DNA binding // inferred from direct assay /// 0042393 // histone binding // inferred from direct assay","chr1:28844744-28865607 (+) // 98.88 // p35.3"]
["11757759_s_at",0.20989323,0.21502686,0.20989323,-0.3384056,-0.20989323,-0.231184,0.0018298331,2.909394E-4,1.386485,0.47143203,1.386485,"up","PEG10",23089.0,"0006915 // apoptotic process // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:94298171-94299006 (+) // 99.3 // q21.3"]
["11725334_at",0.42065287,0.41961718,0.4399643,-0.41961718,-0.44698524,-0.42794132,9.054753E-5,1.3218617E-7,1.8128498,0.8582594,1.8128498,"up","MZT1",440145.0,"0033566 // gamma-tubulin complex localization // inferred from mutant phenotype","0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // inferred from direct assay /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0008274 // gamma-tubulin ring complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr13:73282504-73302001 (-) // 96.63 // q21.33"]
["11719645_a_at",0.3151183,0.13067198,0.3428893,-0.14140224,-0.1730752,-0.13067198,0.006047203,0.0037298442,1.3298618,0.41127634,1.3298618,"up","GATAD2A",54815.0,"0001568 // blood vessel development // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001842 // neural fold formation // inferred from electronic annotation /// 0006306 // DNA methylation // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0010172 // embryonic body morphogenesis // inferred from electronic annotation /// 0012501 // programmed cell death // inferred from electronic annotation /// 0021506 // anterior neuropore closure // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0016581 // NuRD complex // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation","0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0030674 // protein binding, bridging // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:19496641-19619736 (+) // 96.93 // p13.11"]
["11747617_a_at",0.23809719,0.17800903,0.25483322,-0.22428417,-0.23692894,-0.17800903,0.0014606237,1.197021E-4,1.3535241,0.43672052,1.3535241,"up","ABCD3",5825.0,"0006200 // ATP catabolic process // inferred from direct assay /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006635 // fatty acid beta-oxidation // inferred from genetic interaction /// 0006810 // transport // inferred from electronic annotation /// 0007031 // peroxisome organization // inferred from direct assay /// 0042221 // response to chemical stimulus // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042760 // very long-chain fatty acid catabolic process // inferred from genetic interaction /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005777 // peroxisome // inferred from direct assay /// 0005777 // peroxisome // inferred from electronic annotation /// 0005778 // peroxisomal membrane // inferred from direct assay /// 0005778 // peroxisomal membrane // traceable author statement /// 0005778 // peroxisomal membrane // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from direct assay /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0042626 // ATPase activity, coupled to transmembrane movement of substances // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0043621 // protein self-association // inferred from electronic annotation","chr1:94883942-94983158 (+) // 98.77 // p21.3"]
["11726769_a_at",-0.26747847,-0.11958647,-0.42468786,0.17885256,0.119586945,0.1807499,0.011572944,0.00888667,-1.3475269,-0.43031406,1.3475269,"down","XAF1",54739.0,"0006915 // apoptotic process // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0060337 // type I interferon-mediated signaling pathway // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:6659155-6678962 (+) // 40.74 // p13.1"]
["11748544_s_at",-0.17883396,-0.20843506,-0.20807171,0.17883396,0.18078518,0.20632267,8.554759E-4,8.0836535E-6,-1.3077568,-0.3870942,1.3077568,"down","TXNIP",10628.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006606 // protein import into nucleus // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0009749 // response to glucose stimulus // inferred from electronic annotation /// 0030216 // keratinocyte differentiation // inferred from direct assay /// 0032355 // response to estradiol stimulus // inferred from electronic annotation /// 0032570 // response to progesterone stimulus // inferred from electronic annotation /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042542 // response to hydrogen peroxide // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043086 // negative regulation of catalytic activity // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from electronic annotation /// 0051592 // response to calcium ion // inferred from electronic annotation /// 0051782 // negative regulation of cell division // inferred from direct assay /// 0071228 // cellular response to tumor cell // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005758 // mitochondrial intermembrane space // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0004857 // enzyme inhibitor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction","chr1:145439346-145441230 (+) // 100.0 // q21.1"]
["11722015_at",0.19927835,0.2532444,0.22595692,-0.21169138,-0.31694126,-0.19927835,0.0018715136,3.1654647E-4,1.3839549,0.46879688,1.3839549,"up","OLR1",4973.0,"0006508 // proteolysis // traceable author statement /// 0006954 // inflammatory response // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007159 // leukocyte cell-cell adhesion // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008015 // blood circulation // traceable author statement /// 0008219 // cell death // inferred from electronic annotation /// 0042157 // lipoprotein metabolic process // inferred from electronic annotation /// 0042542 // response to hydrogen peroxide // inferred from electronic annotation /// 0050900 // leukocyte migration // traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005624 // membrane fraction // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005041 // low-density lipoprotein receptor activity // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr12:10310899-10324802 (-) // 78.55 // p13.2"]
["11750790_a_at",-0.239779,-0.32631493,-0.13053131,0.19402218,0.13053131,0.14679766,0.0050201556,0.0028655194,-1.3097808,-0.38932547,1.3097808,"down","UBE4A",9354.0,"0000209 // protein polyubiquitination // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation","0000151 // ubiquitin ligase complex // inferred from electronic annotation /// 0000151 // ubiquitin ligase complex // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation","0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0034450 // ubiquitin-ubiquitin ligase activity // inferred from electronic annotation","chr11:118249215-118267222 (+) // 99.91 // q23.3"]
["11744331_a_at",-0.22289276,-0.3339119,-0.19441509,0.27516842,0.19441509,0.26429462,0.002292283,5.6219497E-4,-1.4093527,-0.49503264,1.4093527,"down","CFB",629.0,"0006508 // proteolysis // inferred from electronic annotation /// 0006956 // complement activation // traceable author statement /// 0006956 // complement activation // inferred from electronic annotation /// 0006957 // complement activation, alternative pathway // non-traceable author statement /// 0006957 // complement activation, alternative pathway // traceable author statement /// 0006957 // complement activation, alternative pathway // inferred from electronic annotation /// 0030449 // regulation of complement activation // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement","0001848 // complement binding // traceable author statement /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // traceable author statement /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr6:31895474-31919861 (+) // 99.16 // p21.33"]
["11720508_at",-0.2069788,-0.2506008,-0.16612816,0.16612816,0.22656155,0.23564625,0.0016855665,2.1777027E-4,-1.3354703,-0.4173479,1.3354703,"down","FBN1",2200.0,"0001501 // skeletal system development // inferred from mutant phenotype /// 0007507 // heart development // inferred from mutant phenotype /// 0035582 // sequestering of BMP in extracellular matrix // inferred from sequence or structural similarity /// 0035583 // sequestering of TGFbeta in extracellular matrix // inferred from sequence or structural similarity","0001527 // microfibril // inferred from direct assay /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from direct assay /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005604 // basement membrane // inferred from direct assay /// 0005615 // extracellular space // inferred from direct assay /// 0031012 // extracellular matrix // inferred from direct assay","0005201 // extracellular matrix structural constituent // inferred from direct assay /// 0005201 // extracellular matrix structural constituent // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from direct assay /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr15:48700505-48938046 (-) // 96.67 // q21.1"]
["11722758_at",0.3518057,0.23191833,0.29274464,-0.26590538,-0.23191833,-0.26634312,0.0014606237,1.1485316E-4,1.4609213,0.54687846,1.4609213,"up","NPR3",4883.0,"0001501 // skeletal system development // inferred from sequence or structural similarity /// 0002158 // osteoclast proliferation // inferred from sequence or structural similarity /// 0007193 // adenylate cyclase-inhibiting G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007194 // negative regulation of adenylate cyclase activity // inferred from electronic annotation /// 0007200 // phospholipase C-activating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0008217 // regulation of blood pressure // inferred from sequence or structural similarity /// 0008217 // regulation of blood pressure // inferred from electronic annotation /// 0033688 // regulation of osteoblast proliferation // inferred from sequence or structural similarity /// 0035810 // positive regulation of urine volume // inferred from sequence or structural similarity /// 0051000 // positive regulation of nitric-oxide synthase activity // inferred from sequence or structural similarity","0005624 // membrane fraction // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred by curator /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0008528 // G-protein coupled peptide receptor activity // inferred from sequence or structural similarity /// 0016941 // natriuretic peptide receptor activity // inferred from direct assay /// 0017046 // peptide hormone binding // inferred from sequence or structural similarity /// 0017046 // peptide hormone binding // inferred from electronic annotation /// 0042562 // hormone binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from electronic annotation","chr5:32787810-32791823 (+) // 99.28 // p13.3"]
["11736916_a_at",0.13556242,0.21502876,0.28692055,-0.20873737,-0.1845007,-0.13556242,0.0031910876,0.0013369959,1.3092774,0.38877076,1.3092774,"up","C17orf58",284018.0,"","","","chr17:65987217-65989765 (-) // 85.22 // q24.2"]
["11736985_a_at",0.1804514,0.18427563,0.20444489,-0.18065071,-0.24310064,-0.1804514,0.0012374767,6.0292914E-5,1.3114156,0.3911249,1.3114156,"up","NUBPL",80224.0,"0032981 // mitochondrial respiratory chain complex I assembly // inferred from mutant phenotype /// 0070584 // mitochondrion morphogenesis // inferred from mutant phenotype","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation /// 0051539 // 4 iron, 4 sulfur cluster binding // inferred from direct assay","chr14:32030590-32330368 (+) // 60.45 // q12"]
["11742811_at",0.29082727,0.23576117,0.32372618,-0.39721584,-0.23576117,-0.29812527,0.0020141562,3.7636785E-4,1.5092226,0.5938057,1.5092226,"up","RPS6KA3",6197.0,"0001501 // skeletal system development // traceable author statement /// 0002224 // toll-like receptor signaling pathway // inferred from sequence or structural similarity /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002224 // toll-like receptor signaling pathway // inferred from electronic annotation /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007243 // intracellular protein kinase cascade // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007417 // central nervous system development // traceable author statement /// 0008063 // Toll signaling pathway // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030307 // positive regulation of cell growth // traceable author statement /// 0032496 // response to lipopolysaccharide // inferred from sequence or structural similarity /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0043555 // regulation of translation in response to stress // traceable author statement /// 0043620 // regulation of DNA-dependent transcription in response to stress // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045597 // positive regulation of cell differentiation // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0051403 // stress-activated MAPK cascade // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0043027 // cysteine-type endopeptidase inhibitor activity involved in apoptotic process // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chrX:20168028-20284990 (-) // 90.75 // p22.12"]
["11757900_a_at",-0.21063232,-0.31124544,-0.20716095,0.27769518,0.20716143,0.26559734,0.0017681847,2.6071045E-4,-1.4075285,-0.4931642,1.4075285,"down","SEBOX","645832 /// 7448","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006955 // immune response // inferred from electronic annotation /// 0006955 // immune response // traceable author statement /// 0007155 // cell adhesion // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007160 // cell-matrix adhesion // inferred from direct assay /// 0007160 // cell-matrix adhesion // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0010811 // positive regulation of cell-substrate adhesion // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // inferred from direct assay /// 0014911 // positive regulation of smooth muscle cell migration // inferred from direct assay /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030195 // negative regulation of blood coagulation // inferred by curator /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0030949 // positive regulation of vascular endothelial growth factor receptor signaling pathway // traceable author statement /// 0032092 // positive regulation of protein binding // inferred from direct assay /// 0033627 // cell adhesion mediated by integrin // inferred from direct assay /// 0048260 // positive regulation of receptor-mediated endocytosis // inferred from direct assay /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0061302 // smooth muscle cell-matrix adhesion // inferred from direct assay /// 0090303 // positive regulation of wound healing // inferred by curator","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from sequence or structural similarity /// 0071062 // alphav-beta3 integrin-vitronectin complex // traceable author statement","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005044 // scavenger receptor activity // inferred from electronic annotation /// 0005178 // integrin binding // inferred from physical interaction /// 0008201 // heparin binding // inferred from electronic annotation /// 0030247 // polysaccharide binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050840 // extracellular matrix binding // inferred from electronic annotation","chr17:26694305-26694974 (-) // 96.45 // q11.2"]
["11724372_at",-0.22153091,-0.15320301,-0.2144494,0.19929838,0.15320301,0.21234846,0.0015678201,1.6607625E-4,-1.3055681,-0.3846777,1.3055681,"down","ANXA10",11199.0,"","0005739 // mitochondrion // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation /// 0005509 // calcium ion binding // traceable author statement /// 0005544 // calcium-dependent phospholipid binding // inferred from electronic annotation","chr4:169013665-169109087 (+) // 96.42 // q32.3"]
["11716937_a_at",-0.15917826,-0.1304245,-0.17041254,0.1304245,0.16327715,0.45309067,0.02049368,0.017576696,-1.3215849,-0.40226918,1.3215849,"down","NUPR1",26471.0,"0006917 // induction of apoptosis // non-traceable author statement /// 0016049 // cell growth // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","","chr16:28548694-28550495 (-) // 92.08 // p11.2"]
["11727172_at",0.17979908,0.12539005,0.1437273,-0.34472656,-0.12539005,-0.28968143,0.00635787,0.0040204264,1.3221674,0.4029048,1.3221674,"up","TRPS1",7227.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0001501 // skeletal system development // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006607 // NLS-bearing substrate import into nucleus // traceable author statement /// 0032330 // regulation of chondrocyte differentiation // inferred from sequence or structural similarity /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008270 // zinc ion binding // traceable author statement /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:116420723-116681255 (-) // 94.97 // q23.3"]
["11762533_a_at",-1.0134506,-0.9670439,-1.0205374,1.0122366,0.96704483,1.0069771,9.054753E-5,8.888665E-8,-3.988271,-1.9957634,3.988271,"down","RAP1A","RAP1A",5906.0,"0000186 // activation of MAPKK activity // traceable author statement /// 0006112 // energy reserve metabolic process // traceable author statement /// 0006184 // GTP catabolic process // traceable author statement /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0050796 // regulation of insulin secretion // traceable author statement","0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0032045 // guanyl-nucleotide exchange factor complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0017016 // Ras GTPase binding // inferred from electronic annotation"]
["11724916_at",0.23252678,0.1364212,0.24102306,-0.13642073,-0.21583843,-0.17633104,0.0024703806,7.3118036E-4,1.3009093,0.37952042,1.3009093,"up","TMTC3",160418.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr12:88536072-88593664 (+) // 91.71 // q21.32"]
["11739305_a_at",0.27300453,0.15058231,0.26556492,-0.18179798,-0.24285793,-0.15058231,0.002621334,9.2812895E-4,1.3392853,0.4214633,1.3392853,"up","WRB",7485.0,"","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr21:40752212-40769814 (+) // 99.43 // q22.2"]

{"sheet":"Diff Data(UP)","index":4,"n_rows":39,"n_cols":19,"rows_kept":39,"cut":false,"hidden":false,"merged":[[0,1,0,3],[0,4,0,6],[0,7,0,8],[0,9,0,12],[0,13,0,18]]}
["Probe","KD","KD","KD","NC","NC","NC","P-value","P-value","Fold change","Fold change","Fold change","Fold change","Annotation","Annotation","Annotation","Annotation","Annotation","Annotation"]
["probeSet","E1853-1_(PrimeView).CEL","E1853-2_(PrimeView).CEL","E1853-3_(PrimeView).CEL","E1852-1_(PrimeView).CEL","E1852-2_(PrimeView).CEL","E1852-3_(PrimeView).CEL","Corrected p-value","P-value","Fold change","Log Fold change","Absolute Fold change","Regulation","Gene Symbol","Entrez Gene","Gene Ontology Biological Process","Gene Ontology Cellular Component","Gene Ontology Molecular Function","Alignments"]
["11759321_a_at",0.16639733,0.14187622,0.16639733,-0.14187622,-0.31881595,-0.2512405,0.0035495067,0.0016259721,1.31543,0.39553452,1.31543,"up","MPZL3",196264.0,"0007155 // cell adhesion // inferred from electronic annotation /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0042633 // hair cycle // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr11:118097410-118123083 (-) // 91.23 // q23.3"]
["11717903_s_at",0.23975754,0.19050694,0.3509121,-0.27492046,-0.19050694,-0.21697998,0.0024703806,8.075217E-4,1.4023645,0.48786134,1.4023645,"up","IER3IP1",51124.0,"0042981 // regulation of apoptotic process // inferred from mutant phenotype","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr18:44681412-44702735 (-) // 93.75 // q21.1"]
["11720837_a_at",0.30883455,0.15040493,0.31174755,-0.15040493,-0.18255568,-0.21654797,0.0033463445,0.0014760602,1.3567597,0.44016522,1.3567597,"up","HIRA",7290.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0007369 // gastrulation // inferred from electronic annotation /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0016568 // chromatin modification // inferred from electronic annotation","0000790 // nuclear chromatin // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0016605 // PML body // inferred from electronic annotation","0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003714 // transcription corepressor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr22:19318220-19419247 (-) // 94.4 // q11.21"]
["11745181_a_at",0.22208118,0.18778896,0.34674835,-0.24672127,-0.18778896,-0.22202396,0.0024703806,7.771054E-4,1.3861188,0.47105092,1.3861188,"up","NAA15",80155.0,"0001525 // angiogenesis // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006474 // N-terminal protein amino acid acetylation // inferred from direct assay /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008080 // N-acetyltransferase activity // inferred from electronic annotation /// 0016407 // acetyltransferase activity // inferred from direct assay /// 0043022 // ribosome binding // inferred from direct assay","chr4:140222654-140310342 (+) // 91.62 // q31.1"]
["11757588_a_at",0.23656654,0.20769215,0.22189426,-0.20769215,-0.24055195,-0.25091362,8.554759E-4,7.942611E-6,1.3708812,0.45510355,1.3708812,"up","ALG5",29880.0,"0006486 // protein glycosylation // traceable author statement /// 0006486 // protein glycosylation // inferred from electronic annotation /// 0006488 // dolichol-linked oligosaccharide biosynthetic process // traceable author statement /// 0007368 // determination of left/right symmetry // inferred from electronic annotation /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004576 // oligosaccharyl transferase activity // traceable author statement /// 0004581 // dolichyl-phosphate beta-glucosyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation","chr13:37523980-37527163 (-) // 95.54 // q13.3"]
["11739456_at",0.22416687,0.15196991,0.25693178,-0.15197039,-0.19641972,-0.24336958,0.0022862386,5.5595266E-4,1.3270991,0.40827608,1.3270991,"up","SGMS1",259230.0,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0006665 // sphingolipid metabolic process // traceable author statement /// 0006665 // sphingolipid metabolic process // inferred from electronic annotation /// 0006686 // sphingomyelin biosynthetic process // inferred from direct assay /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0016049 // cell growth // inferred from direct assay /// 0016049 // cell growth // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030148 // sphingolipid biosynthetic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0071222 // cellular response to lipopolysaccharide // inferred from electronic annotation /// 0071356 // cellular response to tumor necrosis factor // inferred from electronic annotation","0000138 // Golgi trans cisterna // inferred from direct assay /// 0000139 // Golgi membrane // traceable author statement /// 0000139 // Golgi membrane // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030173 // integral to Golgi membrane // inferred from direct assay","0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0033188 // sphingomyelin synthase activity // inferred from mutant phenotype /// 0033188 // sphingomyelin synthase activity // inferred from electronic annotation /// 0047493 // ceramide cholinephosphotransferase activity // inferred from direct assay","chr10:52065359-52383737 (-) // 98.65 // q11.23"]
["11723110_at",0.1765461,0.23343563,0.247962,-0.1765461,-0.19718361,-0.22890472,0.0014009658,9.3620074E-5,1.3381063,0.42019272,1.3381063,"up","PLEKHB2",55041.0,"","0005768 // endosome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0055038 // recycling endosome membrane // inferred from electronic annotation","0005543 // phospholipid binding // inferred from electronic annotation","chr2:131862419-131907418 (+) // 83.36 // q21.1"]
["11732322_at",0.1935463,0.19118595,0.17550564,-0.17550564,-0.21529675,-0.24654484,0.0012374767,4.791841E-5,1.3187718,0.39919502,1.3187718,"up","FXN",2395.0,"0006119 // oxidative phosphorylation // inferred from electronic annotation /// 0006783 // heme biosynthetic process // non-traceable author statement /// 0006783 // heme biosynthetic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // inferred from mutant phenotype /// 0006879 // cellular iron ion homeostasis // inferred from electronic annotation /// 0007005 // mitochondrion organization // inferred from electronic annotation /// 0007628 // adult walking behavior // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0009060 // aerobic respiration // inferred from electronic annotation /// 0009792 // embryo development ending in birth or egg hatching // inferred from electronic annotation /// 0010039 // response to iron ion // inferred from mutant phenotype /// 0010722 // regulation of ferrochelatase activity // inferred from direct assay /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0016226 // iron-sulfur cluster assembly // inferred from electronic annotation /// 0016540 // protein autoprocessing // inferred from direct assay /// 0018283 // iron incorporation into metallo-sulfur cluster // inferred from direct assay /// 0019230 // proprioception // inferred from electronic annotation /// 0030307 // positive regulation of cell growth // inferred from mutant phenotype /// 0040015 // negative regulation of multicellular organism growth // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0045773 // positive regulation of axon extension // inferred from electronic annotation /// 0046621 // negative regulation of organ growth // inferred from electronic annotation /// 0048554 // positive regulation of metalloenzyme activity // inferred from mutant phenotype /// 0051347 // positive regulation of transferase activity // inferred from mutant phenotype /// 0051349 // positive regulation of lyase activity // inferred from direct assay /// 0051349 // positive regulation of lyase activity // inferred from mutant phenotype /// 0051353 // positive regulation of oxidoreductase activity // inferred from mutant phenotype /// 0055072 // iron ion homeostasis // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0070301 // cellular response to hydrogen peroxide // inferred from direct assay /// 0090201 // negative regulation of release of cytochrome c from mitochondria // inferred from mutant phenotype","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // inferred from sequence or structural similarity /// 0005759 // mitochondrial matrix // non-traceable author statement /// 0005829 // cytosol // inferred from direct assay","0004322 // ferroxidase activity // inferred from direct assay /// 0004322 // ferroxidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008198 // ferrous iron binding // inferred from direct assay /// 0008199 // ferric iron binding // inferred from direct assay /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from electronic annotation /// 0034986 // iron chaperone activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from direct assay /// 0051537 // 2 iron, 2 sulfur cluster binding // inferred from direct assay","chr9:71650174-71689099 (+) // 73.82 // q21.11"]
["11739910_a_at",0.36175728,0.2907958,0.36175728,-0.5721917,-0.29079628,-0.44847345,0.0024703806,7.9428684E-4,1.7114952,0.77525723,1.7114952,"up","ELOVL6",79071.0,"0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0019367 // fatty acid elongation, saturated fatty acid // inferred from direct assay /// 0019367 // fatty acid elongation, saturated fatty acid // inferred from electronic annotation /// 0019432 // triglyceride biosynthetic process // traceable author statement /// 0030497 // fatty acid elongation // inferred from electronic annotation /// 0034625 // fatty acid elongation, monounsaturated fatty acid // inferred from electronic annotation /// 0035338 // long-chain fatty-acyl-CoA biosynthetic process // traceable author statement /// 0042759 // long-chain fatty acid biosynthetic process // inferred from direct assay /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030176 // integral to endoplasmic reticulum membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0009922 // fatty acid elongase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016747 // transferase activity, transferring acyl groups other than amino-acyl groups // inferred from electronic annotation","chr4:110970228-111120139 (-) // 99.32 // q25"]
["11748854_a_at",0.3380847,0.29126072,0.26908493,-0.26908493,-0.43755388,-0.37887716,0.0017433804,2.4432776E-4,1.581524,0.66131544,1.581524,"up","RPUSD4",84881.0,"0001522 // pseudouridine synthesis // inferred from electronic annotation /// 0009451 // RNA modification // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0009982 // pseudouridine synthase activity // inferred from electronic annotation","chr11:126072693-126075676 (-) // 88.95 // q24.2"]
["11716197_a_at",0.1472969,0.13480997,0.3318901,-0.19756365,-0.21033955,-0.13480997,0.0071678963,0.004734997,1.3063759,0.38557005,1.3063759,"up","ADIPOR2",79602.0,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0009755 // hormone-mediated signaling pathway // inferred from sequence or structural similarity /// 0019395 // fatty acid oxidation // inferred from sequence or structural similarity","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0042562 // hormone binding // inferred from sequence or structural similarity /// 0042802 // identical protein binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr12:1800188-1897845 (+) // 96.29 // p13.33"]
["11731580_x_at",0.28880024,0.25206757,0.32494545,-0.40004635,-0.25206757,-0.42989826,0.002040057,3.8418593E-4,1.56838,0.6492751,1.56838,"up","KCTD20",222658.0,"0051260 // protein homooligomerization // inferred from electronic annotation","","0005216 // ion channel activity // inferred from electronic annotation","chr6:36410543-36458918 (+) // 85.4 // p21.31"]
["11723420_s_at",0.28074455,0.3255844,0.29459667,-0.28074408,-0.3669157,-0.32832193,0.001120038,2.4526378E-5,1.5428907,0.6256358,1.5428907,"up","BTF3L4",91408.0,"","","","chr1:52521801-52554585 (+) // 87.15 // p32.3"]
["11725208_at",0.45690393,0.27616072,0.18219233,-0.21491194,-0.24925995,-0.18219185,0.0055084573,0.0032849705,1.4344923,0.52054024,1.4344923,"up","LETM1",3954.0,"0042407 // cristae formation // inferred from mutant phenotype","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from direct assay /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation /// 0005509 // calcium ion binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr4:1809542-1857974 (-) // 88.79 // p16.3"]
["11736931_s_at",0.119460106,0.10198307,0.13511181,-0.3461132,-0.38084316,-0.10198307,0.013765996,0.011012797,1.315093,0.39516482,1.315093,"up","FAM72A","653820 /// 728833 /// 729533","","","","chr1:206138454-206155147 (+) // 96.15 // q32.1 /// chr1:120838982-120855680 (+) // 95.74 // p11.2 /// chr1:143896451-143913145 (-) // 95.7 // q21.1"]
["11736931_s_at",0.119460106,0.10198307,0.13511181,-0.3461132,-0.38084316,-0.10198307,0.013765996,0.011012797,1.315093,0.39516482,1.315093,"up","FAM72B","653820 /// 728833 /// 729533","","","","chr1:206138454-206155147 (+) // 96.15 // q32.1 /// chr1:120838982-120855680 (+) // 95.74 // p11.2 /// chr1:143896451-143913145 (-) // 95.7 // q21.1"]
["11715521_a_at",0.24922562,0.19059753,0.19611168,-0.35408115,-0.24324226,-0.19059753,0.0024703806,7.8063627E-4,1.3895508,0.4746186,1.3895508,"up","MLEC",9761.0,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006457 // protein folding // traceable author statement /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0030246 // carbohydrate binding // inferred from sequence or structural similarity","chr12:121124948-121139662 (+) // 92.78 // q24.31"]
["11736931_s_at",0.119460106,0.10198307,0.13511181,-0.3461132,-0.38084316,-0.10198307,0.013765996,0.011012797,1.315093,0.39516482,1.315093,"up","FAM72D","653820 /// 728833 /// 729533","","","","chr1:206138454-206155147 (+) // 96.15 // q32.1 /// chr1:120838982-120855680 (+) // 95.74 // p11.2 /// chr1:143896451-143913145 (-) // 95.7 // q21.1"]
["11740489_at",0.35065317,0.21882486,0.31450367,-0.21882534,-0.21970463,-0.437397,0.004105283,0.0020823812,1.5017412,0.5866362,1.5017412,"up","MAPK9",5601.0,"0000165 // MAPK cascade // inferred from electronic annotation /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006950 // response to stress // traceable author statement /// 0007254 // JNK cascade // inferred from direct assay /// 0007254 // JNK cascade // traceable author statement /// 0007258 // JUN phosphorylation // inferred from direct assay /// 0008063 // Toll signaling pathway // traceable author statement /// 0010628 // positive regulation of gene expression // inferred from mutant phenotype /// 0010744 // positive regulation of macrophage derived foam cell differentiation // inferred from mutant phenotype /// 0016310 // phosphorylation // inferred from electronic annotation /// 0031558 // induction of apoptosis in response to chemical stimulus // inferred from electronic annotation /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0046686 // response to cadmium ion // inferred from electronic annotation /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // traceable author statement /// 0051403 // stress-activated MAPK cascade // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004705 // JUN kinase activity // inferred from direct assay /// 0004707 // MAP kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from direct assay /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr5:179673021-179719071 (-) // 95.9 // q35.3"]
["11724644_at",0.4510684,0.052011013,0.46045446,-0.06365633,-0.052011013,-0.08020115,0.04786657,0.04566541,1.3071887,0.38646746,1.3071887,"up","SPOPL",339745.0,"0016567 // protein ubiquitination // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","","chr2:139259349-139331117 (+) // 96.93 // q22.1"]
["11720306_at",0.37876034,0.33269787,0.37535763,-0.36583996,-0.33269787,-0.39251614,8.554759E-4,5.780219E-6,1.653997,0.72595656,1.653997,"up","SERP1",27230.0,"0001501 // skeletal system development // inferred from electronic annotation /// 0006006 // glucose metabolic process // inferred from electronic annotation /// 0006464 // cellular protein modification process // traceable author statement /// 0006486 // protein glycosylation // inferred from electronic annotation /// 0006486 // protein glycosylation // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006950 // response to stress // traceable author statement /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0007009 // plasma membrane organization // traceable author statement /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0010259 // multicellular organismal aging // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0030968 // endoplasmic reticulum unfolded protein response // inferred from electronic annotation /// 0032024 // positive regulation of insulin secretion // inferred from electronic annotation /// 0045727 // positive regulation of translation // inferred from electronic annotation /// 0046622 // positive regulation of organ growth // inferred from electronic annotation /// 0048644 // muscle organ morphogenesis // inferred from electronic annotation /// 0060124 // positive regulation of growth hormone secretion // inferred from electronic annotation","0005783 // endoplasmic reticulum // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005840 // ribosome // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr3:150259779-150264712 (-) // 98.88 // q25.1"]
["11760003_x_at",0.1478796,0.20888805,0.1852355,-0.21284676,-0.1478796,-0.24594784,0.0019126503,3.476998E-4,1.3039535,0.38289243,1.3039535,"up","ING5",84289.0,"0006260 // DNA replication // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006473 // protein acetylation // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0016568 // chromatin modification // inferred from electronic annotation /// 0043966 // histone H3 acetylation // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045926 // negative regulation of growth // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0070776 // MOZ/MORF histone acetyltransferase complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0035064 // methylated histone residue binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:242641460-242662686 (+) // 67.36 // q37.3"]
["11748926_a_at",0.19191742,0.22480106,0.2289319,-0.2636075,-0.32719088,-0.1919179,0.0018511375,3.0800235E-4,1.3909998,0.4761222,1.3909998,"up","GANAB",23193.0,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006457 // protein folding // traceable author statement /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008277 // regulation of G-protein coupled receptor protein signaling pathway // inferred from electronic annotation /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004553 // hydrolase activity, hydrolyzing O-glycosyl compounds // inferred from electronic annotation /// 0008565 // protein transporter activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity, acting on glycosyl bonds // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation /// 0033919 // glucan 1,3-alpha-glucosidase activity // inferred from electronic annotation","chr11:62392903-62407205 (-) // 89.75 // q12.3"]
["11725861_a_at",0.17620087,0.19813061,0.32869816,-0.22232151,-0.23146057,-0.17620087,0.002621334,9.2591473E-4,1.3606892,0.44433755,1.3606892,"up","MYBL1",4603.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // non-traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation","chr8:67474410-67525484 (-) // 97.22 // q13.1"]
["11741252_a_at",0.31635284,0.3018198,0.39657784,-0.3018198,-0.33779716,-0.33814716,0.0011720356,3.1184394E-5,1.584658,0.6641716,1.584658,"up","RCC1",1104.0,"0000082 // G1/S transition of mitotic cell cycle // inferred from mutant phenotype /// 0007049 // cell cycle // inferred from electronic annotation /// 0007052 // mitotic spindle organization // inferred from direct assay /// 0007059 // chromosome segregation // inferred from mutant phenotype /// 0007067 // mitosis // inferred from electronic annotation /// 0007088 // regulation of mitosis // inferred from direct assay /// 0007090 // regulation of S phase of mitotic cell cycle // inferred from mutant phenotype /// 0016032 // viral reproduction // traceable author statement /// 0051225 // spindle assembly // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation","0000790 // nuclear chromatin // inferred from direct assay /// 0000794 // condensed nuclear chromosome // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from direct assay /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005087 // Ran guanyl-nucleotide exchange factor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0031492 // nucleosomal DNA binding // inferred from direct assay /// 0042393 // histone binding // inferred from direct assay","chr1:28844744-28865607 (+) // 98.88 // p35.3"]
["11757759_s_at",0.20989323,0.21502686,0.20989323,-0.3384056,-0.20989323,-0.231184,0.0018298331,2.909394E-4,1.386485,0.47143203,1.386485,"up","PEG10",23089.0,"0006915 // apoptotic process // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:94298171-94299006 (+) // 99.3 // q21.3"]
["11725334_at",0.42065287,0.41961718,0.4399643,-0.41961718,-0.44698524,-0.42794132,9.054753E-5,1.3218617E-7,1.8128498,0.8582594,1.8128498,"up","MZT1",440145.0,"0033566 // gamma-tubulin complex localization // inferred from mutant phenotype","0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // inferred from direct assay /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0008274 // gamma-tubulin ring complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr13:73282504-73302001 (-) // 96.63 // q21.33"]
["11719645_a_at",0.3151183,0.13067198,0.3428893,-0.14140224,-0.1730752,-0.13067198,0.006047203,0.0037298442,1.3298618,0.41127634,1.3298618,"up","GATAD2A",54815.0,"0001568 // blood vessel development // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001842 // neural fold formation // inferred from electronic annotation /// 0006306 // DNA methylation // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0010172 // embryonic body morphogenesis // inferred from electronic annotation /// 0012501 // programmed cell death // inferred from electronic annotation /// 0021506 // anterior neuropore closure // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0016581 // NuRD complex // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation","0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0030674 // protein binding, bridging // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:19496641-19619736 (+) // 96.93 // p13.11"]
["11747617_a_at",0.23809719,0.17800903,0.25483322,-0.22428417,-0.23692894,-0.17800903,0.0014606237,1.197021E-4,1.3535241,0.43672052,1.3535241,"up","ABCD3",5825.0,"0006200 // ATP catabolic process // inferred from direct assay /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006635 // fatty acid beta-oxidation // inferred from genetic interaction /// 0006810 // transport // inferred from electronic annotation /// 0007031 // peroxisome organization // inferred from direct assay /// 0042221 // response to chemical stimulus // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042760 // very long-chain fatty acid catabolic process // inferred from genetic interaction /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005777 // peroxisome // inferred from direct assay /// 0005777 // peroxisome // inferred from electronic annotation /// 0005778 // peroxisomal membrane // inferred from direct assay /// 0005778 // peroxisomal membrane // traceable author statement /// 0005778 // peroxisomal membrane // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from direct assay /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0042626 // ATPase activity, coupled to transmembrane movement of substances // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0043621 // protein self-association // inferred from electronic annotation","chr1:94883942-94983158 (+) // 98.77 // p21.3"]
["11722015_at",0.19927835,0.2532444,0.22595692,-0.21169138,-0.31694126,-0.19927835,0.0018715136,3.1654647E-4,1.3839549,0.46879688,1.3839549,"up","OLR1",4973.0,"0006508 // proteolysis // traceable author statement /// 0006954 // inflammatory response // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007159 // leukocyte cell-cell adhesion // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008015 // blood circulation // traceable author statement /// 0008219 // cell death // inferred from electronic annotation /// 0042157 // lipoprotein metabolic process // inferred from electronic annotation /// 0042542 // response to hydrogen peroxide // inferred from electronic annotation /// 0050900 // leukocyte migration // traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005624 // membrane fraction // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005041 // low-density lipoprotein receptor activity // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr12:10310899-10324802 (-) // 78.55 // p13.2"]
["11722758_at",0.3518057,0.23191833,0.29274464,-0.26590538,-0.23191833,-0.26634312,0.0014606237,1.1485316E-4,1.4609213,0.54687846,1.4609213,"up","NPR3",4883.0,"0001501 // skeletal system development // inferred from sequence or structural similarity /// 0002158 // osteoclast proliferation // inferred from sequence or structural similarity /// 0007193 // adenylate cyclase-inhibiting G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007194 // negative regulation of adenylate cyclase activity // inferred from electronic annotation /// 0007200 // phospholipase C-activating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0008217 // regulation of blood pressure // inferred from sequence or structural similarity /// 0008217 // regulation of blood pressure // inferred from electronic annotation /// 0033688 // regulation of osteoblast proliferation // inferred from sequence or structural similarity /// 0035810 // positive regulation of urine volume // inferred from sequence or structural similarity /// 0051000 // positive regulation of nitric-oxide synthase activity // inferred from sequence or structural similarity","0005624 // membrane fraction // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred by curator /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0008528 // G-protein coupled peptide receptor activity // inferred from sequence or structural similarity /// 0016941 // natriuretic peptide receptor activity // inferred from direct assay /// 0017046 // peptide hormone binding // inferred from sequence or structural similarity /// 0017046 // peptide hormone binding // inferred from electronic annotation /// 0042562 // hormone binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from electronic annotation","chr5:32787810-32791823 (+) // 99.28 // p13.3"]
["11736916_a_at",0.13556242,0.21502876,0.28692055,-0.20873737,-0.1845007,-0.13556242,0.0031910876,0.0013369959,1.3092774,0.38877076,1.3092774,"up","C17orf58",284018.0,"","","","chr17:65987217-65989765 (-) // 85.22 // q24.2"]
["11736985_a_at",0.1804514,0.18427563,0.20444489,-0.18065071,-0.24310064,-0.1804514,0.0012374767,6.0292914E-5,1.3114156,0.3911249,1.3114156,"up","NUBPL",80224.0,"0032981 // mitochondrial respiratory chain complex I assembly // inferred from mutant phenotype /// 0070584 // mitochondrion morphogenesis // inferred from mutant phenotype","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation /// 0051539 // 4 iron, 4 sulfur cluster binding // inferred from direct assay","chr14:32030590-32330368 (+) // 60.45 // q12"]
["11742811_at",0.29082727,0.23576117,0.32372618,-0.39721584,-0.23576117,-0.29812527,0.0020141562,3.7636785E-4,1.5092226,0.5938057,1.5092226,"up","RPS6KA3",6197.0,"0001501 // skeletal system development // traceable author statement /// 0002224 // toll-like receptor signaling pathway // inferred from sequence or structural similarity /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002224 // toll-like receptor signaling pathway // inferred from electronic annotation /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007243 // intracellular protein kinase cascade // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007417 // central nervous system development // traceable author statement /// 0008063 // Toll signaling pathway // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030307 // positive regulation of cell growth // traceable author statement /// 0032496 // response to lipopolysaccharide // inferred from sequence or structural similarity /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0043066 // negative regulation of apoptotic process // traceable author statement /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0043555 // regulation of translation in response to stress // traceable author statement /// 0043620 // regulation of DNA-dependent transcription in response to stress // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045597 // positive regulation of cell differentiation // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0051403 // stress-activated MAPK cascade // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0043027 // cysteine-type endopeptidase inhibitor activity involved in apoptotic process // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chrX:20168028-20284990 (-) // 90.75 // p22.12"]
["11727172_at",0.17979908,0.12539005,0.1437273,-0.34472656,-0.12539005,-0.28968143,0.00635787,0.0040204264,1.3221674,0.4029048,1.3221674,"up","TRPS1",7227.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0001501 // skeletal system development // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006607 // NLS-bearing substrate import into nucleus // traceable author statement /// 0032330 // regulation of chondrocyte differentiation // inferred from sequence or structural similarity /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008270 // zinc ion binding // traceable author statement /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:116420723-116681255 (-) // 94.97 // q23.3"]
["11724916_at",0.23252678,0.1364212,0.24102306,-0.13642073,-0.21583843,-0.17633104,0.0024703806,7.3118036E-4,1.3009093,0.37952042,1.3009093,"up","TMTC3",160418.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr12:88536072-88593664 (+) // 91.71 // q21.32"]
["11739305_a_at",0.27300453,0.15058231,0.26556492,-0.18179798,-0.24285793,-0.15058231,0.002621334,9.2812895E-4,1.3392853,0.4214633,1.3392853,"up","WRB",7485.0,"","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr21:40752212-40769814 (+) // 99.43 // q22.2"]

{"sheet":"Diff Data(Down)","index":5,"n_rows":21,"n_cols":19,"rows_kept":21,"cut":false,"hidden":false,"merged":[[0,1,0,3],[0,4,0,6],[0,7,0,8],[0,9,0,12],[0,13,0,18]]}
["Probe","KD","KD","KD","NC","NC","NC","P-value","P-value","Fold change","Fold change","Fold change","Fold change","Annotation","Annotation","Annotation","Annotation","Annotation","Annotation"]
["probeSet","E1853-1_(PrimeView).CEL","E1853-2_(PrimeView).CEL","E1853-3_(PrimeView).CEL","E1852-1_(PrimeView).CEL","E1852-2_(PrimeView).CEL","E1852-3_(PrimeView).CEL","Corrected p-value","P-value","Fold change","Log Fold change","Absolute Fold change","Regulation","Gene Symbol","Entrez Gene","Gene Ontology Biological Process","Gene Ontology Cellular Component","Gene Ontology Molecular Function","Alignments"]
["11723069_at",-0.2599516,-0.2932148,-0.3253951,0.28524017,0.2599516,0.37149143,0.0014257188,1.0198572E-4,-1.5140522,-0.5984149,1.5140522,"down","GABBR1","10537 /// 2550","0001649 // osteoblast differentiation // inferred from electronic annotation /// 0006508 // proteolysis // non-traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007194 // negative regulation of adenylate cyclase activity // inferred from electronic annotation /// 0007194 // negative regulation of adenylate cyclase activity // traceable author statement /// 0007214 // gamma-aminobutyric acid signaling pathway // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0014048 // regulation of glutamate secretion // inferred from electronic annotation /// 0014053 // negative regulation of gamma-aminobutyric acid secretion // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from direct assay /// 0030817 // regulation of cAMP biosynthetic process // inferred from electronic annotation /// 0032446 // protein modification by small protein conjugation // non-traceable author statement /// 0032811 // negative regulation of epinephrine secretion // inferred from electronic annotation /// 0033602 // negative regulation of dopamine secretion // inferred from electronic annotation /// 0034341 // response to interferon-gamma // inferred from expression pattern /// 0034612 // response to tumor necrosis factor // inferred from expression pattern /// 0035094 // response to nicotine // inferred from electronic annotation /// 0035417 // negative regulation of mitotic prometaphase // inferred from mutant phenotype /// 0043011 // myeloid dendritic cell differentiation // inferred from mutant phenotype /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from mutant phenotype /// 0045471 // response to ethanol // inferred from electronic annotation /// 0050805 // negative regulation of synaptic transmission // inferred from electronic annotation /// 0060124 // positive regulation of growth hormone secretion // inferred from electronic annotation /// 0070842 // aggresome assembly // inferred from direct assay","0005576 // extracellular region // inferred from electronic annotation /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016235 // aggresome // inferred from direct assay /// 0019717 // synaptosome // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030673 // axolemma // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from electronic annotation /// 0043198 // dendritic shaft // inferred from electronic annotation /// 0045121 // membrane raft // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004965 // G-protein coupled GABA receptor activity // inferred from electronic annotation /// 0004965 // G-protein coupled GABA receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0070628 // proteasome binding // inferred from direct assay","chr6:29523318-29527702 (-) // 98.04 // p22.1"]
["11757900_a_at",-0.21063232,-0.31124544,-0.20716095,0.27769518,0.20716143,0.26559734,0.0017681847,2.6071045E-4,-1.4075285,-0.4931642,1.4075285,"down","VTN","645832 /// 7448","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006955 // immune response // inferred from electronic annotation /// 0006955 // immune response // traceable author statement /// 0007155 // cell adhesion // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007160 // cell-matrix adhesion // inferred from direct assay /// 0007160 // cell-matrix adhesion // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0010811 // positive regulation of cell-substrate adhesion // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // inferred from direct assay /// 0014911 // positive regulation of smooth muscle cell migration // inferred from direct assay /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030195 // negative regulation of blood coagulation // inferred by curator /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0030949 // positive regulation of vascular endothelial growth factor receptor signaling pathway // traceable author statement /// 0032092 // positive regulation of protein binding // inferred from direct assay /// 0033627 // cell adhesion mediated by integrin // inferred from direct assay /// 0048260 // positive regulation of receptor-mediated endocytosis // inferred from direct assay /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0061302 // smooth muscle cell-matrix adhesion // inferred from direct assay /// 0090303 // positive regulation of wound healing // inferred by curator","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from sequence or structural similarity /// 0071062 // alphav-beta3 integrin-vitronectin complex // traceable author statement","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005044 // scavenger receptor activity // inferred from electronic annotation /// 0005178 // integrin binding // inferred from physical interaction /// 0008201 // heparin binding // inferred from electronic annotation /// 0030247 // polysaccharide binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050840 // extracellular matrix binding // inferred from electronic annotation","chr17:26694305-26694974 (-) // 96.45 // q11.2"]
["11726479_a_at",-0.1962552,-0.20418167,-0.6599922,0.27396107,0.24320602,0.1962552,0.021648686,0.018835938,-1.5065868,-0.5912838,1.5065868,"down","MX2",4600.0,"0006184 // GTP catabolic process // traceable author statement /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006952 // defense response // traceable author statement /// 0009615 // response to virus // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0060337 // type I interferon-mediated signaling pathway // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0005525 // GTP binding // inferred from electronic annotation","chr21:42741816-42780869 (+) // 91.78 // q22.3"]
["11722980_a_at",-0.14675832,-0.22550821,-0.38666677,0.20170355,0.14675808,0.24204636,0.006377894,0.004044949,-1.3658639,-0.44981375,1.3658639,"down","F8",2157.0,"0002576 // platelet degranulation // traceable author statement /// 0006953 // acute-phase response // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0007596 // blood coagulation // inferred from electronic annotation /// 0007597 // blood coagulation, intrinsic pathway // traceable author statement /// 0007599 // hemostasis // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0030168 // platelet activation // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0031093 // platelet alpha granule lumen // traceable author statement","0005507 // copper ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chrX:154064062-154114725 (-) // 81.39 // q28"]
["11742883_at",-0.14328241,-0.30030298,-0.44424915,0.21709108,0.14328241,0.20075321,0.008326622,0.005761779,-1.3976345,-0.48298708,1.3976345,"down","ST6GALNAC2",10610.0,"0006486 // protein glycosylation // inferred from electronic annotation /// 0016266 // O-glycan processing // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0000139 // Golgi membrane // traceable author statement /// 0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030173 // integral to Golgi membrane // inferred from electronic annotation","0008373 // sialyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation","chr17:74561428-74582320 (-) // 97.08 // q25.1"]
["11755257_a_at",-0.22696686,-0.22458124,-0.4160986,0.36122513,0.22458076,0.3133936,0.003280011,0.0014222064,-1.5041503,-0.5889487,1.5041503,"down","TRIM31",11074.0,"0016567 // protein ubiquitination // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:30070676-30073430 (-) // 83.81 // p22.1"]
["11723069_at",-0.2599516,-0.2932148,-0.3253951,0.28524017,0.2599516,0.37149143,0.0014257188,1.0198572E-4,-1.5140522,-0.5984149,1.5140522,"down","UBD","10537 /// 2550","0001649 // osteoblast differentiation // inferred from electronic annotation /// 0006508 // proteolysis // non-traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007194 // negative regulation of adenylate cyclase activity // inferred from electronic annotation /// 0007194 // negative regulation of adenylate cyclase activity // traceable author statement /// 0007214 // gamma-aminobutyric acid signaling pathway // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0014048 // regulation of glutamate secretion // inferred from electronic annotation /// 0014053 // negative regulation of gamma-aminobutyric acid secretion // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from direct assay /// 0030817 // regulation of cAMP biosynthetic process // inferred from electronic annotation /// 0032446 // protein modification by small protein conjugation // non-traceable author statement /// 0032811 // negative regulation of epinephrine secretion // inferred from electronic annotation /// 0033602 // negative regulation of dopamine secretion // inferred from electronic annotation /// 0034341 // response to interferon-gamma // inferred from expression pattern /// 0034612 // response to tumor necrosis factor // inferred from expression pattern /// 0035094 // response to nicotine // inferred from electronic annotation /// 0035417 // negative regulation of mitotic prometaphase // inferred from mutant phenotype /// 0043011 // myeloid dendritic cell differentiation // inferred from mutant phenotype /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from mutant phenotype /// 0045471 // response to ethanol // inferred from electronic annotation /// 0050805 // negative regulation of synaptic transmission // inferred from electronic annotation /// 0060124 // positive regulation of growth hormone secretion // inferred from electronic annotation /// 0070842 // aggresome assembly // inferred from direct assay","0005576 // extracellular region // inferred from electronic annotation /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016235 // aggresome // inferred from direct assay /// 0019717 // synaptosome // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030673 // axolemma // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from electronic annotation /// 0043198 // dendritic shaft // inferred from electronic annotation /// 0045121 // membrane raft // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004965 // G-protein coupled GABA receptor activity // inferred from electronic annotation /// 0004965 // G-protein coupled GABA receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0070628 // proteasome binding // inferred from direct assay","chr6:29523318-29527702 (-) // 98.04 // p22.1"]
["11733254_a_at",-0.15568018,-0.18091822,-0.2554407,0.20670033,0.20477962,0.15568066,0.0019126503,3.5321206E-4,-1.3071276,-0.38639992,1.3071276,"down","FXYD3",5349.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006821 // chloride transport // traceable author statement /// 0006821 // chloride transport // inferred from electronic annotation /// 0050790 // regulation of catalytic activity // inferred from electronic annotation","0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0034707 // chloride channel complex // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005254 // chloride channel activity // inferred from electronic annotation /// 0005254 // chloride channel activity // traceable author statement /// 0051117 // ATPase binding // inferred from electronic annotation","chr19:35606533-35615226 (+) // 93.17 // q13.12"]
["11720410_s_at",-0.18877697,-0.24790478,-0.15956497,0.15956497,0.20675468,0.17985058,0.0016611826,2.0385014E-4,-1.3020687,-0.38080564,1.3020687,"down","CYP1B1",1545.0,"0001525 // angiogenesis // inferred from electronic annotation /// 0006725 // cellular aromatic compound metabolic process // inferred from electronic annotation /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0007601 // visual perception // traceable author statement /// 0008210 // estrogen metabolic process // inferred from electronic annotation /// 0009404 // toxin metabolic process // inferred from electronic annotation /// 0009636 // response to toxin // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0043542 // endothelial cell migration // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0061298 // retina vasculature development in camera-type eye // inferred from electronic annotation /// 0071603 // endothelial cell-cell adhesion // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0004497 // monooxygenase activity // traceable author statement /// 0004497 // monooxygenase activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from electronic annotation /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016705 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen // inferred from electronic annotation /// 0016712 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen // inferred from direct assay /// 0016712 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen // inferred from electronic annotation /// 0019825 // oxygen binding // traceable author statement /// 0020037 // heme binding // traceable author statement /// 0020037 // heme binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070330 // aromatase activity // inferred from electronic annotation","chr2:38294650-38303323 (-) // 99.15 // p22.2"]
["11726778_at",-0.21202898,-0.16837883,-0.1578474,0.24326658,0.15784693,0.29811335,0.0024703806,7.245076E-4,-1.3309847,-0.412494,1.3309847,"down","OAS2",4939.0,"0006139 // nucleobase-containing compound metabolic process // traceable author statement /// 0006164 // purine nucleotide biosynthetic process // inferred from direct assay /// 0006401 // RNA catabolic process // inferred from electronic annotation /// 0006486 // protein glycosylation // inferred from direct assay /// 0006955 // immune response // inferred from electronic annotation /// 0009615 // response to virus // traceable author statement /// 0018377 // protein myristoylation // inferred from mutant phenotype /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060337 // type I interferon-mediated signaling pathway // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005792 // microsome // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // traceable author statement /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0001730 // 2'-5'-oligoadenylate synthetase activity // inferred from direct assay /// 0001730 // 2'-5'-oligoadenylate synthetase activity // inferred from mutant phenotype /// 0001730 // 2'-5'-oligoadenylate synthetase activity // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003725 // double-stranded RNA binding // inferred from direct assay /// 0003725 // double-stranded RNA binding // inferred from mutant phenotype /// 0005524 // ATP binding // inferred from mutant phenotype /// 0005524 // ATP binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation /// 0016779 // nucleotidyltransferase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:113416273-113426700 (+) // 68.66 // q24.13"]
["11726769_a_at",-0.26747847,-0.11958647,-0.42468786,0.17885256,0.119586945,0.1807499,0.011572944,0.00888667,-1.3475269,-0.43031406,1.3475269,"down","XAF1",54739.0,"0006915 // apoptotic process // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0060337 // type I interferon-mediated signaling pathway // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:6659155-6678962 (+) // 40.74 // p13.1"]
["11748544_s_at",-0.17883396,-0.20843506,-0.20807171,0.17883396,0.18078518,0.20632267,8.554759E-4,8.0836535E-6,-1.3077568,-0.3870942,1.3077568,"down","TXNIP",10628.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006606 // protein import into nucleus // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0009749 // response to glucose stimulus // inferred from electronic annotation /// 0030216 // keratinocyte differentiation // inferred from direct assay /// 0032355 // response to estradiol stimulus // inferred from electronic annotation /// 0032570 // response to progesterone stimulus // inferred from electronic annotation /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042542 // response to hydrogen peroxide // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043086 // negative regulation of catalytic activity // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from electronic annotation /// 0051592 // response to calcium ion // inferred from electronic annotation /// 0051782 // negative regulation of cell division // inferred from direct assay /// 0071228 // cellular response to tumor cell // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005758 // mitochondrial intermembrane space // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0004857 // enzyme inhibitor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction","chr1:145439346-145441230 (+) // 100.0 // q21.1"]
["11750790_a_at",-0.239779,-0.32631493,-0.13053131,0.19402218,0.13053131,0.14679766,0.0050201556,0.0028655194,-1.3097808,-0.38932547,1.3097808,"down","UBE4A",9354.0,"0000209 // protein polyubiquitination // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation","0000151 // ubiquitin ligase complex // inferred from electronic annotation /// 0000151 // ubiquitin ligase complex // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation","0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0034450 // ubiquitin-ubiquitin ligase activity // inferred from electronic annotation","chr11:118249215-118267222 (+) // 99.91 // q23.3"]
["11744331_a_at",-0.22289276,-0.3339119,-0.19441509,0.27516842,0.19441509,0.26429462,0.002292283,5.6219497E-4,-1.4093527,-0.49503264,1.4093527,"down","CFB",629.0,"0006508 // proteolysis // inferred from electronic annotation /// 0006956 // complement activation // traceable author statement /// 0006956 // complement activation // inferred from electronic annotation /// 0006957 // complement activation, alternative pathway // non-traceable author statement /// 0006957 // complement activation, alternative pathway // traceable author statement /// 0006957 // complement activation, alternative pathway // inferred from electronic annotation /// 0030449 // regulation of complement activation // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement","0001848 // complement binding // traceable author statement /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // traceable author statement /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr6:31895474-31919861 (+) // 99.16 // p21.33"]
["11720508_at",-0.2069788,-0.2506008,-0.16612816,0.16612816,0.22656155,0.23564625,0.0016855665,2.1777027E-4,-1.3354703,-0.4173479,1.3354703,"down","FBN1",2200.0,"0001501 // skeletal system development // inferred from mutant phenotype /// 0007507 // heart development // inferred from mutant phenotype /// 0035582 // sequestering of BMP in extracellular matrix // inferred from sequence or structural similarity /// 0035583 // sequestering of TGFbeta in extracellular matrix // inferred from sequence or structural similarity","0001527 // microfibril // inferred from direct assay /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from direct assay /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005604 // basement membrane // inferred from direct assay /// 0005615 // extracellular space // inferred from direct assay /// 0031012 // extracellular matrix // inferred from direct assay","0005201 // extracellular matrix structural constituent // inferred from direct assay /// 0005201 // extracellular matrix structural constituent // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from direct assay /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr15:48700505-48938046 (-) // 96.67 // q21.1"]
["11757900_a_at",-0.21063232,-0.31124544,-0.20716095,0.27769518,0.20716143,0.26559734,0.0017681847,2.6071045E-4,-1.4075285,-0.4931642,1.4075285,"down","SEBOX","645832 /// 7448","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006955 // immune response // inferred from electronic annotation /// 0006955 // immune response // traceable author statement /// 0007155 // cell adhesion // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007160 // cell-matrix adhesion // inferred from direct assay /// 0007160 // cell-matrix adhesion // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0010811 // positive regulation of cell-substrate adhesion // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // inferred from direct assay /// 0014911 // positive regulation of smooth muscle cell migration // inferred from direct assay /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030195 // negative regulation of blood coagulation // inferred by curator /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0030949 // positive regulation of vascular endothelial growth factor receptor signaling pathway // traceable author statement /// 0032092 // positive regulation of protein binding // inferred from direct assay /// 0033627 // cell adhesion mediated by integrin // inferred from direct assay /// 0048260 // positive regulation of receptor-mediated endocytosis // inferred from direct assay /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0061302 // smooth muscle cell-matrix adhesion // inferred from direct assay /// 0090303 // positive regulation of wound healing // inferred by curator","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from sequence or structural similarity /// 0071062 // alphav-beta3 integrin-vitronectin complex // traceable author statement","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005044 // scavenger receptor activity // inferred from electronic annotation /// 0005178 // integrin binding // inferred from physical interaction /// 0008201 // heparin binding // inferred from electronic annotation /// 0030247 // polysaccharide binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050840 // extracellular matrix binding // inferred from electronic annotation","chr17:26694305-26694974 (-) // 96.45 // q11.2"]
["11724372_at",-0.22153091,-0.15320301,-0.2144494,0.19929838,0.15320301,0.21234846,0.0015678201,1.6607625E-4,-1.3055681,-0.3846777,1.3055681,"down","ANXA10",11199.0,"","0005739 // mitochondrion // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation /// 0005509 // calcium ion binding // traceable author statement /// 0005544 // calcium-dependent phospholipid binding // inferred from electronic annotation","chr4:169013665-169109087 (+) // 96.42 // q32.3"]
["11716937_a_at",-0.15917826,-0.1304245,-0.17041254,0.1304245,0.16327715,0.45309067,0.02049368,0.017576696,-1.3215849,-0.40226918,1.3215849,"down","NUPR1",26471.0,"0006917 // induction of apoptosis // non-traceable author statement /// 0016049 // cell growth // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","","chr16:28548694-28550495 (-) // 92.08 // p11.2"]
["11762533_a_at",-1.0134506,-0.9670439,-1.0205374,1.0122366,0.96704483,1.0069771,9.054753E-5,8.888665E-8,-3.988271,-1.9957634,3.988271,"down","RAP1A","RAP1A",5906.0,"0000186 // activation of MAPKK activity // traceable author statement /// 0006112 // energy reserve metabolic process // traceable author statement /// 0006184 // GTP catabolic process // traceable author statement /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0050796 // regulation of insulin secretion // traceable author statement","0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0032045 // guanyl-nucleotide exchange factor complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0017016 // Ras GTPase binding // inferred from electronic annotation"]

{"sheet":"Raw_Data","index":6,"n_rows":49397,"n_cols":25,"rows_kept":2250,"cut":true,"hidden":false,"merged":[[0,1,0,6],[0,7,0,12],[0,13,0,14],[0,15,0,18],[0,19,0,24]],"bounds":{"rows_first":1000,"rows_last":250,"rows_between":1000,"halvings":1}}
["Probe","Raw Data","Raw Data","Raw Data","Raw Data","Raw Data","Raw Data","Normalized Data","Normalized Data","Normalized Data","Normalized Data","Normalized Data","Normalized Data","P-value","P-value","Fold change","Fold change","Fold change","Fold change","Annotation","Annotation","Annotation","Annotation","Annotation","Annotation"]
["probeSet","E1853-1_(PrimeView).CEL","E1853-2_(PrimeView).CEL","E1853-3_(PrimeView).CEL","E1852-1_(PrimeView).CEL","E1852-2_(PrimeView).CEL","E1852-3_(PrimeView).CEL","E1853-1_(PrimeView).CEL","E1853-2_(PrimeView).CEL","E1853-3_(PrimeView).CEL","E1852-1_(PrimeView).CEL","E1852-2_(PrimeView).CEL","E1852-3_(PrimeView).CEL","Corrected p-value","P-value","Fold change","Log Fold change","Absolute Fold change","Regulation","Gene Symbol","Entrez Gene","Gene Ontology Biological Process","Gene Ontology Cellular Component","Gene Ontology Molecular Function","Alignments"]
["11764191_at",21.65903,20.101234,21.510883,23.563114,21.403545,22.129433,0.004951,-0.10273361,-0.004951,0.12651253,-0.012167931,0.035948753,0.57404625,0.18826903,-1.0602043,-0.08434225,1.0602043,"down","","","","","","chr17:62342072-62343073 (+) // 99.8 // q23.3"]
["11727050_a_at",138.6766,121.98949,138.82088,135.65213,140.75595,139.9616,-7.505417E-4,-0.18571806,7.5006485E-4,-0.03256321,0.020720959,0.012556076,0.73092765,0.3871106,-1.0440162,-0.062144157,1.0440162,"down","PPP6C",5537.0,"0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0006470 // protein dephosphorylation // inferred from direct assay /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0006470 // protein dephosphorylation // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004722 // protein serine/threonine phosphatase activity // inferred from direct assay /// 0004722 // protein serine/threonine phosphatase activity // inferred from electronic annotation /// 0004722 // protein serine/threonine phosphatase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:127908852-127952218 (-) // 96.0 // q33.3"]
["11750344_a_at",67.54068,64.20736,55.46201,62.104603,68.22463,73.54726,0.03650856,-0.036509037,-0.24774742,-0.084548,0.051044464,0.15942383,0.6880346,0.32329756,-1.0901722,-0.124556,1.0901722,"down","ALOX15",246.0,"0006629 // lipid metabolic process // non-traceable author statement /// 0006691 // leukotriene metabolic process // inferred from electronic annotation /// 0006954 // inflammatory response // traceable author statement /// 0019370 // leukotriene biosynthetic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0005506 // iron ion binding // inferred from electronic annotation /// 0016165 // lipoxygenase activity // inferred from electronic annotation /// 0016165 // lipoxygenase activity // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016702 // oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050473 // arachidonate 15-lipoxygenase activity // inferred from electronic annotation","chr17:4534590-4545230 (-) // 97.77 // p13.2"]
["11759307_at",531.1356,516.1025,536.20746,527.4455,486.49527,515.49115,0.025740623,-0.01568222,0.0394516,0.01568222,-0.100914,-0.017392159,0.6371161,0.25762042,1.0357755,0.050711397,1.0357755,"up","RREB1",6239.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0007265 // Ras protein signal transduction // traceable author statement /// 0007275 // multicellular organismal development // traceable author statement /// 0045893 // positive regulation of transcription, DNA-dependent // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0016604 // nuclear body // traceable author statement /// 0016607 // nuclear speck // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:7108053-7252213 (+) // 95.0 // p24.3"]
["11761403_at",10.966288,12.41434,11.945956,11.509181,12.459384,10.164776,-0.0965786,0.08235383,0.02686882,-0.026868582,0.08757901,-0.20607519,0.8599457,0.62790173,1.0371823,0.052669533,1.0371823,"up","ISCU",23479.0,"0009399 // nitrogen fixation // traceable author statement /// 0016226 // iron-sulfur cluster assembly // traceable author statement /// 0016226 // iron-sulfur cluster assembly // inferred from electronic annotation","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay","0005506 // iron ion binding // traceable author statement /// 0005506 // iron ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0032947 // protein complex scaffold // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation","chr12:108956373-108961684 (+) // 80.72 // q23.3"]
["11757172_at",29.885244,30.42782,30.452812,26.949173,33.844223,30.782549,-0.026549816,-5.9223175E-4,5.9223175E-4,-0.17574215,0.15292645,0.016129494,0.98494846,0.94817865,-1.0046,-0.006621249,1.0046,"down","SNORA47",677828.0,"","","","chr5:76376258-76376396 (-) // 100.0 // q13.3"]
["11763268_at",47.887314,48.786785,44.938484,51.94382,62.060837,60.682446,-0.07207775,-0.045230865,-0.16376972,0.045230865,0.3019619,0.26955748,0.28946513,0.027584013,-1.2305269,-0.29927623,1.2305269,"down","FAM120B",84498.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","","chr6:170599790-170716404 (+) // 88.48 // q27"]
["11727695_a_at",9.781093,9.894166,11.039303,10.33631,11.061425,11.040843,-0.12711763,-0.11053538,0.047463655,-0.047463655,0.050352097,0.04766488,0.6546215,0.27987394,-1.0571995,-0.08024762,1.0571995,"down","KLRC4-KLRK1 /// KLRK1","100528032 /// 22914","0002223 // stimulatory C-type lectin receptor signaling pathway // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0030101 // natural killer cell activation // inferred from electronic annotation /// 0030101 // natural killer cell activation // traceable author statement /// 0031295 // T cell costimulation // traceable author statement /// 0032729 // positive regulation of interferon-gamma production // inferred from electronic annotation /// 0045429 // positive regulation of nitric oxide biosynthetic process // inferred from electronic annotation /// 0045954 // positive regulation of natural killer cell mediated cytotoxicity // inferred from electronic annotation /// 0050776 // regulation of immune response // traceable author statement /// 0050830 // defense response to Gram-positive bacterium // inferred from electronic annotation /// 0071222 // cellular response to lipopolysaccharide // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0030246 // carbohydrate binding // inferred from electronic annotation /// 0032394 // MHC class Ib receptor activity // inferred from electronic annotation /// 0042288 // MHC class I protein binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation","chr12:10524951-10542640 (-) // 54.21 // p13.2"]
["11730840_a_at",168.00504,166.04068,168.87402,161.47264,163.33011,163.87402,0.026442528,0.009474754,0.033885956,-0.03077221,-0.014271259,-0.0094742775,0.21844904,0.012856187,1.0291407,0.04144025,1.0291407,"up","ZMYND8",23613.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0016310 // phosphorylation // inferred from electronic annotation","0005634 // nucleus // inferred from sequence or structural similarity","0001106 // RNA polymerase II transcription corepressor activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070491 // repressing transcription factor binding // inferred from sequence or structural similarity","chr20:45837858-45985474 (-) // 98.92 // q13.12"]
["11755175_a_at",78.608154,81.163925,78.0456,74.849495,83.051956,88.82176,-0.023079872,0.023079872,-0.033441544,-0.09376621,0.05625534,0.15315485,0.817874,0.53812927,-1.0350462,-0.04969519,1.0350462,"down","HSPA12A",259217.0,"0006950 // response to stress // inferred from electronic annotation","","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation","chr10:118430703-118609716 (-) // 94.89 // q25.3"]
["11731820_at",17.17755,17.17755,16.8342,15.898032,17.002613,16.239225,0.021948338,0.021948338,-0.0071806908,-0.08972764,0.0071806908,-0.059093,0.4922723,0.12037931,1.0420698,0.059451904,1.0420698,"up","ADAM11",4185.0,"0006508 // proteolysis // inferred from electronic annotation /// 0007229 // integrin-mediated signaling pathway // traceable author statement /// 0007229 // integrin-mediated signaling pathway // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from sequence or structural similarity","0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0005178 // integrin binding // traceable author statement /// 0008237 // metallopeptidase activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation","chr17:42836398-42859214 (+) // 96.66 // q21.31"]
["11731123_a_at",8.243302,8.32032,8.780787,8.795306,8.32032,7.6789327,-0.013416529,0.0,0.07771158,0.080094814,0.0,-0.11573315,0.8599322,0.62783146,1.0233581,0.03331108,1.0233581,"up","TMEM200A",114801.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr6:130758261-130764212 (+) // 93.26 // q23.1"]
["11761012_x_at",48.582874,44.163723,39.0032,40.80224,41.934635,44.301952,0.17494583,0.037359715,-0.1419096,-0.07685375,-0.037359715,0.04186821,0.87148196,0.65318364,1.0335301,0.04758043,1.0335301,"up","POM121L8P",29797.0,"","","","chr20:23969351-23971719 (+) // 91.03 // p11.21 /// chr22:21636713-21639084 (+) // 93.78 // q11.21 /// chr22:18833988-18836359 (+) // 93.41 // q11.21 /// chr22:24647516-24649886 (+) // 92.32 // q11.23 /// chr22:21043862-21046233 (+) // 91.36 // q11.21 /// chr22:21480010-21482381 (-) // 93.66 // q11.21 /// chr22:22984642-22987012 (-) // 92.36 // q11.22 /// chr22:25052816-25055186 (-) // 92.32 // q11.23"]
["11763593_a_at",15.601863,17.614986,17.271427,16.711926,18.670155,16.617882,-0.122914314,0.052170753,0.023754597,-0.023754597,0.13610125,-0.031896114,0.8521857,0.61068696,-1.0298826,-0.042479817,1.0298826,"down","RGNEF",64283.0,"0021955 // central nervous system neuron axonogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0060052 // neurofilament cytoskeleton organization // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr5:73181727-73237817 (+) // 99.22 // q13.2"]
["11730317_at",7.272083,7.8310013,6.297328,7.4383965,7.620128,7.5241785,-0.04089427,0.06593394,-0.248523,-0.008271217,0.026552439,0.008271217,0.7525184,0.4201885,-1.0594718,-0.08334525,1.0594718,"down","RGS7BP",401190.0,"0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0009968 // negative regulation of signal transduction // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","","chr5:63801773-63908145 (+) // 89.65 // q12.3"]
["11743747_a_at",72.86017,73.76934,71.6404,73.81153,64.0604,71.24385,0.012178421,0.030069828,-0.012178421,0.03089428,-0.17351913,-0.020186424,0.71570444,0.36264113,1.045573,0.06429379,1.045573,"up","PHKA1",5255.0,"0005975 // carbohydrate metabolic process // traceable author statement /// 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0005976 // polysaccharide metabolic process // inferred from electronic annotation /// 0005977 // glycogen metabolic process // traceable author statement /// 0005977 // glycogen metabolic process // inferred from electronic annotation /// 0005980 // glycogen catabolic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006091 // generation of precursor metabolites and energy // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046777 // protein autophosphorylation // inferred from electronic annotation","0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005964 // phosphorylase kinase complex // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004553 // hydrolase activity, hydrolyzing O-glycosyl compounds // inferred from electronic annotation /// 0004689 // phosphorylase kinase activity // inferred from electronic annotation /// 0004689 // phosphorylase kinase activity // traceable author statement /// 0005516 // calmodulin binding // inferred from electronic annotation","chrX:71798663-71934043 (-) // 98.84 // q13.1"]
["11716432_a_at",264.9373,257.95624,251.8405,244.20753,249.86722,261.62366,0.055832863,0.017308235,-0.017308235,-0.061710835,-0.028656006,0.037674904,0.7217237,0.3724997,1.0253916,0.036174953,1.0253916,"up","MNAT1",4331.0,"0000079 // regulation of cyclin-dependent protein kinase activity // traceable author statement /// 0000080 // G1 phase of mitotic cell cycle // traceable author statement /// 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000082 // G1/S transition of mitotic cell cycle // inferred from electronic annotation /// 0000084 // S phase of mitotic cell cycle // traceable author statement /// 0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0000718 // nucleotide-excision repair, DNA damage removal // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006283 // transcription-coupled nucleotide-excision repair // traceable author statement /// 0006289 // nucleotide-excision repair // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006360 // transcription from RNA polymerase I promoter // traceable author statement /// 0006361 // transcription initiation from RNA polymerase I promoter // traceable author statement /// 0006362 // transcription elongation from RNA polymerase I promoter // traceable author statement /// 0006363 // termination of RNA polymerase I transcription // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // inferred from direct assay /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006368 // transcription elongation from RNA polymerase II promoter // traceable author statement /// 0006370 // 7-methylguanosine mRNA capping // traceable author statement /// 0006461 // protein complex assembly // traceable author statement /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007512 // adult heart development // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0021591 // ventricular system development // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0044236 // multicellular organismal metabolic process // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from electronic annotation /// 0050434 // positive regulation of viral transcription // traceable author statement /// 0050790 // regulation of catalytic activity // inferred from electronic annotation /// 0051592 // response to calcium ion // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005675 // holo TFIIH complex // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0004672 // protein kinase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008094 // DNA-dependent ATPase activity // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008270 // zinc ion binding // traceable author statement /// 0008353 // RNA polymerase II carboxy-terminal domain kinase activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from physical interaction","chr14:61201458-61435480 (+) // 94.24 // q23.1"]
["11734196_a_at",184.73453,186.20735,181.527,163.68797,171.24466,173.54071,0.057724476,0.069180965,0.032455444,-0.11678076,-0.05167055,-0.032454967,0.21486291,0.012338489,1.0868019,0.12008897,1.0868019,"up","SAMD4B",55095.0,"","","","chr19:39842454-39875535 (+) // 90.83 // q13.2"]
["11736790_x_at",16.343287,17.30845,17.92461,17.210232,18.55519,17.271433,-0.08123398,0.0015444756,0.052009583,-0.0066657066,0.101890564,-0.0015444756,0.7907034,0.4841708,-1.028437,-0.040453445,1.028437,"down","FBXO4",26272.0,"0000209 // protein polyubiquitination // inferred from direct assay /// 0000723 // telomere maintenance // inferred from mutant phenotype /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0031146 // SCF-dependent proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0031398 // positive regulation of protein ubiquitination // inferred from direct assay","0000151 // ubiquitin ligase complex // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0019005 // SCF ubiquitin ligase complex // inferred from direct assay","0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction","chr5:41925355-41935423 (+) // 83.91 // p13.1"]
["11745745_a_at",363.20773,350.60504,378.80646,335.15802,331.5041,353.42484,0.04516983,-0.0057783127,0.105835915,-0.070783615,-0.0865984,0.0057783127,0.4297204,0.08315222,1.070989,0.09894368,1.070989,"up","SLC39A1",27173.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // traceable author statement /// 0006829 // zinc ion transport // inferred from electronic annotation /// 0030001 // metal ion transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0071577 // zinc ion transmembrane transport // inferred from mutant phenotype /// 0071577 // zinc ion transmembrane transport // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0005102 // receptor binding // inferred from electronic annotation /// 0005385 // zinc ion transmembrane transporter activity // inferred from electronic annotation /// 0022890 // inorganic cation transmembrane transporter activity // traceable author statement /// 0046873 // metal ion transmembrane transporter activity // inferred from electronic annotation","chr1:153931651-153940097 (-) // 92.53 // q21.3"]
["11716949_s_at",198.65338,192.3251,199.5407,197.5407,192.65785,197.33788,0.008844376,-0.037861824,0.015274048,7.405281E-4,-0.035367966,-7.4100494E-4,0.91015744,0.74264574,1.0050089,0.007208329,1.0050089,"up","TM9SF3",56889.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005488 // binding // inferred from direct assay","chr10:98277867-98346797 (-) // 96.48 // q24.1"]
["11715860_a_at",160.41136,151.49611,162.04488,174.82349,159.45296,166.54077,-0.007308483,-0.08980417,0.00730896,0.11681414,-0.015954494,0.0467906,0.5653321,0.18034089,-1.0563964,-0.07915124,1.0563964,"down","RIC8A",60626.0,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0008542 // visual learning // inferred from electronic annotation /// 0009416 // response to light stimulus // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation","0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0001965 // G-protein alpha-subunit binding // inferred from electronic annotation /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005096 // GTPase activator activity // inferred from electronic annotation","chr11:207118-215113 (+) // 82.86 // p15.5"]
["11753470_a_at",191.80666,197.40247,213.19984,204.18462,212.10704,212.97995,-0.11768055,-0.07619333,0.03487301,-0.027459145,0.027459145,0.033384323,0.6426378,0.26474574,-1.0454532,-0.064128466,1.0454532,"down","TIA1",7072.0,"0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // traceable author statement /// 0017148 // negative regulation of translation // inferred from electronic annotation /// 0042036 // negative regulation of cytokine biosynthetic process // inferred from electronic annotation /// 0048024 // regulation of nuclear mRNA splicing, via spliceosome // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008143 // poly(A) RNA binding // traceable author statement /// 0017091 // AU-rich element binding // inferred from electronic annotation","chr2:70443805-70475586 (-) // 95.68 // p13.3"]
["11737412_at",6.857611,5.927469,6.694964,6.705594,6.577787,7.5028377,0.033485413,-0.17680454,-0.0011444092,0.0011444092,-0.02661848,0.1632154,0.7040139,0.34524536,-1.0673759,-0.09406834,1.0673759,"down","SCML4",256380.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation","chr6:108023360-108145521 (-) // 84.48 // q21"]
["11733237_a_at",11.745899,10.854665,10.360547,11.328863,10.368459,10.3781595,0.14622402,0.03238225,-0.034832716,0.09406996,-0.033731222,-0.03238225,0.8471217,0.59919566,1.0271207,0.03860574,1.0271207,"up","RPGRIP1L",23322.0,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0001822 // kidney development // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0007368 // determination of left/right symmetry // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0008589 // regulation of smoothened signaling pathway // inferred from electronic annotation /// 0021532 // neural tube patterning // inferred from electronic annotation /// 0021537 // telencephalon development // inferred from electronic annotation /// 0021549 // cerebellum development // inferred from electronic annotation /// 0021670 // lateral ventricle development // inferred from electronic annotation /// 0021772 // olfactory bulb development // inferred from electronic annotation /// 0022038 // corpus callosum development // inferred from electronic annotation /// 0035108 // limb morphogenesis // inferred from electronic annotation /// 0035115 // embryonic forelimb morphogenesis // inferred from electronic annotation /// 0035116 // embryonic hindlimb morphogenesis // inferred from electronic annotation /// 0042384 // cilium assembly // inferred from electronic annotation /// 0043010 // camera-type eye development // inferred from electronic annotation /// 0043584 // nose development // inferred from electronic annotation /// 0045744 // negative regulation of G-protein coupled receptor protein signaling pathway // inferred from direct assay /// 0060039 // pericardium development // inferred from electronic annotation /// 0060322 // head development // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from direct assay /// 0005923 // tight junction // inferred from electronic annotation /// 0005929 // cilium // inferred from direct assay /// 0005929 // cilium // inferred from electronic annotation /// 0005932 // microtubule basal body // inferred from direct assay /// 0005932 // microtubule basal body // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0035085 // cilium axoneme // inferred from direct assay /// 0035085 // cilium axoneme // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0031870 // thromboxane A2 receptor binding // inferred from physical interaction","chr16:53633817-53737742 (-) // 96.81 // q12.2"]
["11732837_a_at",21.815987,18.583828,20.379465,19.406578,20.757341,23.187893,0.08501673,-0.1463213,-0.013252735,-0.083823204,0.013252735,0.17300272,0.8419926,0.58869874,-1.0417409,-0.058996487,1.0417409,"down","IL37",27178.0,"0001960 // negative regulation of cytokine-mediated signaling pathway // inferred from electronic annotation /// 0006955 // immune response // non-traceable author statement","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation","0005125 // cytokine activity // inferred from electronic annotation /// 0005149 // interleukin-1 receptor binding // non-traceable author statement /// 0005149 // interleukin-1 receptor binding // traceable author statement /// 0005152 // interleukin-1 receptor antagonist activity // inferred from electronic annotation","chr2:113670547-113676459 (+) // 95.9 // q13"]
["11747580_a_at",122.28426,125.04068,113.490555,121.20322,117.84037,124.36449,0.0064053535,0.038564205,-0.10126114,-0.0064053535,-0.046999454,0.030740738,0.9426029,0.82636076,-1.0077999,-0.011209167,1.0077999,"down","PGS1",9489.0,"0006655 // phosphatidylglycerol biosynthetic process // inferred from sequence or structural similarity /// 0006655 // phosphatidylglycerol biosynthetic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008654 // phospholipid biosynthetic process // inferred from electronic annotation /// 0032049 // cardiolipin biosynthetic process // inferred from sequence or structural similarity /// 0046339 // diacylglycerol metabolic process // inferred from sequence or structural similarity","0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from sequence or structural similarity /// 0005524 // ATP binding // inferred from electronic annotation /// 0008444 // CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity // inferred from sequence or structural similarity /// 0008444 // CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016780 // phosphotransferase activity, for other substituted phosphate groups // inferred from electronic annotation","chr17:76374731-76420637 (+) // 98.17 // q25.3"]
["11744584_a_at",338.60345,339.71143,346.8923,340.62686,334.56058,333.78876,-0.0023565292,0.0023565292,0.0325346,0.0062389374,-0.019685745,-0.023017883,0.56920063,0.18344204,1.01607,0.022999808,1.01607,"up","HYI",81888.0,"","","0008903 // hydroxypyruvate isomerase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation","chr1:43916277-43919346 (-) // 92.28 // p34.2"]
["11720005_at",8.378406,9.266533,7.8634634,9.144963,8.405275,8.71252,-0.030516863,0.11483693,-0.1220274,0.095784664,-0.025897503,0.025897503,0.8458778,0.5963871,-1.0313238,-0.044497345,1.0313238,"down","NPTX2",4885.0,"0007268 // synaptic transmission // non-traceable author statement","0005576 // extracellular region // inferred from electronic annotation","0030246 // carbohydrate binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:98246596-98259181 (+) // 94.95 // q22.1"]
["11731753_a_at",6.4327126,7.044011,7.7015114,7.289927,6.4390683,6.3077435,-0.066197395,0.064772606,0.19351697,0.11427975,-0.064772606,-0.09450054,0.78322786,0.47093567,1.0563065,0.07902849,1.0563065,"up","ZNF577",84765.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:52374552-52391229 (-) // 79.47 // q13.41"]
["11758622_s_at",975.4802,967.26636,931.8873,965.114,953.5919,980.5404,0.013806343,0.0016069412,-0.052150726,-0.0016069412,-0.01893425,0.021270752,0.85702544,0.6213543,-1.0086943,-0.012488998,1.0086943,"down","MXRA7",439921.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr17:74675651-74676010 (-) // 99.72 // q25.1 /// chr2:162196027-162196386 (-) // 99.16 // q24.2"]
["11762600_a_at",16.683626,13.6899605,14.792264,15.702481,13.790395,15.743671,0.1305151,-0.15479946,-0.043074608,0.043074846,-0.14425373,0.046854258,0.99051166,0.9687558,-1.0030161,-0.004344784,1.0030161,"down","SEC31B",25956.0,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0012507 // ER to Golgi transport vesicle membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0003954 // NADH dehydrogenase activity // inferred from electronic annotation /// 0008137 // NADH dehydrogenase (ubiquinone) activity // inferred from electronic annotation","chr10:102265384-102289628 (-) // 99.9 // q24.31"]
["11736940_at",29.167736,29.204046,27.855965,25.509094,32.875183,30.544653,-8.9740753E-4,8.9740753E-4,-0.067284584,-0.19425917,0.17172813,0.06564903,0.91609967,0.75689733,-1.0258366,-0.036800932,1.0258366,"down","CHRNB4",1143.0,"0001508 // regulation of action potential // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006811 // ion transport // inferred from electronic annotation /// 0006939 // smooth muscle contraction // inferred from electronic annotation /// 0006940 // regulation of smooth muscle contraction // inferred from electronic annotation /// 0007165 // signal transduction // inferred from direct assay /// 0007268 // synaptic transmission // traceable author statement /// 0007271 // synaptic transmission, cholinergic // traceable author statement /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0035094 // response to nicotine // inferred from electronic annotation /// 0035095 // behavioral response to nicotine // inferred from electronic annotation /// 0042391 // regulation of membrane potential // inferred from electronic annotation /// 0046928 // regulation of neurotransmitter secretion // non-traceable author statement /// 0060084 // synaptic transmission involved in micturition // inferred from mutant phenotype /// 0060084 // synaptic transmission involved in micturition // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred by curator /// 0005892 // acetylcholine-gated channel complex // inferred from direct assay /// 0005892 // acetylcholine-gated channel complex // traceable author statement /// 0005892 // acetylcholine-gated channel complex // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004889 // acetylcholine-activated cation-selective channel activity // traceable author statement /// 0004889 // acetylcholine-activated cation-selective channel activity // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005230 // extracellular ligand-gated ion channel activity // inferred from electronic annotation /// 0015276 // ligand-gated ion channel activity // traceable author statement /// 0015464 // acetylcholine receptor activity // inferred from direct assay /// 0042166 // acetylcholine binding // inferred from electronic annotation","chr15:78916514-78933587 (-) // 73.27 // q25.1"]
["11741412_at",7.5102463,8.524677,7.8923707,8.045624,8.558677,8.13531,-0.107340574,0.07544422,-0.035742044,-0.007996559,0.08118677,0.007996559,0.7720808,0.45373216,-1.034984,-0.049608454,1.034984,"down","LHX9",56956.0,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0008045 // motor axon guidance // inferred from sequence or structural similarity /// 0008283 // cell proliferation // inferred from electronic annotation /// 0008584 // male gonad development // inferred from electronic annotation /// 0008585 // female gonad development // inferred from electronic annotation /// 0035262 // gonad morphogenesis // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from sequence or structural similarity","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003714 // transcription corepressor activity // inferred from sequence or structural similarity /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:197886516-197899273 (+) // 97.89 // q31.3"]
["11753606_x_at",759.08075,742.70715,763.70715,761.00195,748.32916,770.17664,-0.0018234253,-0.033283234,0.006942749,0.0018234253,-0.022403717,0.019112587,0.86171633,0.6312304,-1.0061872,-0.0088987425,1.0061872,"down","CDC42",998.0,"0001934 // positive regulation of protein phosphorylation // inferred from electronic annotation /// 0003334 // keratinocyte development // inferred from electronic annotation /// 0006184 // GTP catabolic process // traceable author statement /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0007030 // Golgi organization // inferred from sequence or structural similarity /// 0007088 // regulation of mitosis // inferred from electronic annotation /// 0007097 // nuclear migration // inferred from electronic annotation /// 0007163 // establishment or maintenance of cell polarity // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0010629 // negative regulation of gene expression // inferred from electronic annotation /// 0016337 // cell-cell adhesion // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from direct assay /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030225 // macrophage differentiation // traceable author statement /// 0031069 // hair follicle morphogenesis // inferred from electronic annotation /// 0031274 // positive regulation of pseudopodium assembly // inferred from direct assay /// 0031295 // T cell costimulation // traceable author statement /// 0031333 // negative regulation of protein complex assembly // inferred from physical interaction /// 0031424 // keratinization // inferred from electronic annotation /// 0031647 // regulation of protein stability // inferred from electronic annotation /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from electronic annotation /// 0034332 // adherens junction organization // inferred from electronic annotation /// 0034613 // cellular protein localization // inferred from electronic annotation /// 0035088 // establishment or maintenance of apical/basal cell polarity // inferred from electronic annotation /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0042059 // negative regulation of epidermal growth factor receptor signaling pathway // traceable author statement /// 0042176 // regulation of protein catabolic process // inferred from electronic annotation /// 0042692 // muscle cell differentiation // traceable author statement /// 0043410 // positive regulation of MAPK cascade // inferred from electronic annotation /// 0043497 // regulation of protein heterodimerization activity // inferred from electronic annotation /// 0043552 // positive regulation of phosphatidylinositol 3-kinase activity // inferred from electronic annotation /// 0045740 // positive regulation of DNA replication // inferred from electronic annotation /// 0045859 // regulation of protein kinase activity // inferred from electronic annotation /// 0046330 // positive regulation of JNK cascade // inferred from electronic annotation /// 0046847 // filopodium assembly // inferred from electronic annotation /// 0048664 // neuron fate determination // inferred from electronic annotation /// 0048730 // epidermis morphogenesis // inferred from electronic annotation /// 0051017 // actin filament bundle assembly // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement /// 0051149 // positive regulation of muscle cell differentiation // traceable author statement /// 0051246 // regulation of protein metabolic process // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 0051489 // regulation of filopodium assembly // inferred from direct assay /// 0051647 // nucleus localization // inferred from electronic annotation /// 0051683 // establishment of Golgi localization // inferred from sequence or structural similarity /// 0051988 // regulation of attachment of spindle microtubules to kinetochore // inferred from mutant phenotype /// 0060070 // canonical Wnt receptor signaling pathway // inferred from electronic annotation /// 0060684 // epithelial-mesenchymal cell signaling // inferred from electronic annotation /// 0060789 // hair follicle placode formation // inferred from electronic annotation /// 0071338 // positive regulation of hair follicle cell proliferation // inferred from electronic annotation /// 0071777 // positive regulation of cell cycle cytokinesis // inferred from mutant phenotype /// 0072384 // organelle transport along microtubule // inferred from sequence or structural similarity /// 0090136 // epithelial cell-cell adhesion // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0000139 // Golgi membrane // inferred from sequence or structural similarity /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030141 // secretory granule // inferred from electronic annotation /// 0030175 // filopodium // inferred from direct assay /// 0030496 // midbody // inferred from direct assay /// 0030496 // midbody // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043005 // neuron projection // inferred from direct assay /// 0043025 // neuronal cell body // inferred from direct assay /// 0045177 // apical part of cell // inferred from electronic annotation /// 0051233 // spindle midzone // inferred from direct assay /// 0071944 // cell periphery // inferred from electronic annotation /// 0072686 // mitotic spindle // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from direct assay /// 0019901 // protein kinase binding // inferred from physical interaction /// 0030742 // GTP-dependent protein binding // inferred from electronic annotation /// 0031435 // mitogen-activated protein kinase kinase kinase binding // inferred from electronic annotation /// 0031996 // thioesterase binding // inferred from physical interaction","chr1:22404971-22418010 (+) // 100.0 // p36.12 /// chr4:22728997-22729573 (-) // 98.96 // p15.2"]
["11761646_at",16.80948,14.854992,16.996344,15.854639,15.9918585,16.407314,0.053436756,-0.124890566,0.069386005,-0.03093338,-0.018500805,0.018500805,0.96339923,0.88780016,1.0066917,0.009621916,1.0066917,"up","SRGAP3",9901.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0005096 // GTPase activator activity // inferred from electronic annotation","chr3:9048662-9166601 (-) // 80.34 // p25.3"]
["11718707_a_at",27.948057,25.957888,23.077633,22.471975,26.572466,23.660885,0.17340946,0.06683445,-0.102843285,-0.14121151,0.10059357,-0.06683445,0.7930979,0.49046814,1.0582039,0.08161769,1.0582039,"up","IGF1R",3480.0,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0006916 // anti-apoptosis // traceable author statement /// 0006955 // immune response // inferred from mutant phenotype /// 0007165 // signal transduction // traceable author statement /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0007409 // axonogenesis // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0014065 // phosphatidylinositol 3-kinase cascade // inferred by curator /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030010 // establishment of cell polarity // inferred from electronic annotation /// 0030238 // male sex determination // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from mutant phenotype /// 0030879 // mammary gland development // inferred from electronic annotation /// 0031017 // exocrine pancreas development // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from electronic annotation /// 0032467 // positive regulation of cytokinesis // inferred from electronic annotation /// 0033197 // response to vitamin E // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043409 // negative regulation of MAPK cascade // inferred from electronic annotation /// 0043410 // positive regulation of MAPK cascade // inferred from electronic annotation /// 0045740 // positive regulation of DNA replication // inferred from mutant phenotype /// 0045768 // positive regulation of anti-apoptosis // inferred from electronic annotation /// 0046328 // regulation of JNK cascade // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from electronic annotation /// 0048009 // insulin-like growth factor receptor signaling pathway // inferred from direct assay /// 0048009 // insulin-like growth factor receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // inferred from direct assay /// 0051054 // positive regulation of DNA metabolic process // inferred from electronic annotation /// 0051262 // protein tetramerization // inferred from direct assay /// 0051291 // protein heterooligomerization // inferred from electronic annotation /// 0051389 // inactivation of MAPKK activity // inferred from direct assay /// 0051897 // positive regulation of protein kinase B signaling cascade // inferred from electronic annotation /// 0051898 // negative regulation of protein kinase B signaling cascade // inferred from electronic annotation /// 0060740 // prostate gland epithelium morphogenesis // inferred from electronic annotation /// 0090031 // positive regulation of steroid hormone biosynthetic process // inferred from electronic annotation","0005792 // microsome // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred by curator /// 0005901 // caveola // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005010 // insulin-like growth factor-activated receptor activity // inferred from direct assay /// 0005010 // insulin-like growth factor-activated receptor activity // traceable author statement /// 0005158 // insulin receptor binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005520 // insulin-like growth factor binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0031994 // insulin-like growth factor I binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0043548 // phosphatidylinositol 3-kinase binding // inferred from physical interaction /// 0043548 // phosphatidylinositol 3-kinase binding // inferred from electronic annotation /// 0043559 // insulin binding // inferred from physical interaction /// 0043560 // insulin receptor substrate binding // inferred from physical interaction /// 0043560 // insulin receptor substrate binding // inferred from electronic annotation","chr15:99192272-99507759 (+) // 97.28 // q26.3"]
["11722086_x_at",8.884296,10.327445,10.995431,10.239246,11.546674,9.767379,-0.2109673,0.006186962,0.096607685,-0.0061872005,0.16718078,-0.07425308,0.8504766,0.60580295,-1.0460639,-0.064970985,1.0460639,"down","SEPT1",1731.0,"0007049 // cell cycle // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0031105 // septin complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation","chr16:30389455-30394171 (-) // 96.24 // p11.2"]
["11742820_s_at",10.299633,8.208072,9.47025,8.1057205,9.0692,8.1057205,0.25551176,-0.07196593,0.13439322,-0.09006882,0.07196593,-0.09006882,0.6432113,0.26544625,1.103462,0.14203691,1.103462,"up","OGN",4969.0,"0048662 // negative regulation of smooth muscle cell proliferation // inferred from sequence or structural similarity","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0031012 // extracellular matrix // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // inferred from electronic annotation","chr9:95146099-95166937 (-) // 99.63 // q22.31"]
["11740952_at",25.61433,35.47657,25.023558,34.94195,31.671036,35.169838,-0.37711096,0.09280443,-0.41077518,0.070898056,-0.070898056,0.08027649,0.5891152,0.20250563,-1.1961951,-0.25845274,1.1961951,"down","OTUD7A",161725.0,"0006508 // proteolysis // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr15:31775328-31947542 (-) // 88.66 // q13.3"]
["11746041_a_at",693.9437,695.06213,773.62134,665.27484,683.00055,633.4014,0.011466026,0.013789177,0.16827488,-0.049402237,-0.011466026,-0.12023258,0.47458455,0.109601855,1.0904148,0.124877,1.0904148,"up","TRA2B",6434.0,"0000375 // RNA splicing, via transesterification reactions // traceable author statement /// 0000381 // regulation of alternative nuclear mRNA splicing, via spliceosome // inferred from direct assay /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred from direct assay /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0048026 // positive regulation of nuclear mRNA splicing, via spliceosome // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003729 // mRNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction","chr3:185634536-185655818 (-) // 94.9 // q27.2"]
["11762973_at",9.623821,9.655945,8.991759,9.892422,8.51358,10.642568,-0.0024039745,0.002403736,-0.10041046,0.037309885,-0.17924786,0.14276028,0.91520035,0.7539865,-1.0236654,-0.033744264,1.0236654,"down","","","","0005576 // extracellular region // inferred from electronic annotation","","chr2:31393687-31394575 (-) // 65.65 // p23.1"]
["11744564_a_at",280.5393,283.45248,282.413,297.13885,285.63248,286.68384,-0.020430565,-0.0055265427,-0.0108270645,0.062503815,0.0055265427,0.0108270645,0.47241238,0.10814665,-1.027079,-0.038547132,1.027079,"down","PPWD1",23398.0,"0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0000413 // protein peptidyl-prolyl isomerization // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006457 // protein folding // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay","0003755 // peptidyl-prolyl cis-trans isomerase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation","chr5:64859125-64883376 (+) // 99.43 // q12.3"]
["11759054_at",6.3991594,6.600843,7.8279476,6.038307,7.0007277,7.0565014,-0.08719516,-0.0424273,0.20355654,-0.17093349,0.0424273,0.053875446,0.88803524,0.6920292,1.0349216,0.049521543,1.0349216,"up","DEFB126",81623.0,"0006952 // defense response // inferred from electronic annotation /// 0042742 // defense response to bacterium // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0030112 // glycocalyx // inferred from electronic annotation","","chr20:123009-126392 (+) // 91.23 // p13"]
["11720104_a_at",140.8466,133.01048,129.5407,121.15852,129.14235,123.20734,0.12294102,0.04035616,0.0022215843,-0.09428835,-0.0022215843,-0.07009554,0.4064566,0.0698452,1.079758,0.110708065,1.079758,"up","PAK1",5058.0,"0000165 // MAPK cascade // inferred from direct assay /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016358 // dendrite development // inferred from electronic annotation /// 0031295 // T cell costimulation // traceable author statement /// 0031532 // actin cytoskeleton reorganization // inferred from direct assay /// 0031532 // actin cytoskeleton reorganization // inferred from mutant phenotype /// 0031532 // actin cytoskeleton reorganization // non-traceable author statement /// 0032869 // cellular response to insulin stimulus // inferred from electronic annotation /// 0032956 // regulation of actin cytoskeleton organization // inferred from electronic annotation /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from direct assay /// 0033148 // positive regulation of intracellular estrogen receptor signaling pathway // inferred from direct assay /// 0033554 // cellular response to stress // inferred from electronic annotation /// 0042060 // wound healing // inferred from mutant phenotype /// 0043507 // positive regulation of JUN kinase activity // inferred from mutant phenotype /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from electronic annotation /// 0048754 // branching morphogenesis of a tube // inferred from mutant phenotype /// 0048812 // neuron projection morphogenesis // inferred from sequence or structural similarity /// 0048812 // neuron projection morphogenesis // inferred from electronic annotation /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0051496 // positive regulation of stress fiber assembly // inferred from mutant phenotype /// 0060244 // negative regulation of cell proliferation involved in contact inhibition // inferred from mutant phenotype","0001726 // ruffle // inferred from direct assay /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from direct assay /// 0005925 // focal adhesion // inferred from electronic annotation /// 0014704 // intercalated disc // inferred from sequence or structural similarity /// 0014704 // intercalated disc // inferred from electronic annotation /// 0030018 // Z disc // inferred from sequence or structural similarity /// 0030018 // Z disc // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030424 // axon // inferred from sequence or structural similarity /// 0030424 // axon // inferred from electronic annotation /// 0030425 // dendrite // inferred from sequence or structural similarity /// 0030425 // dendrite // inferred from electronic annotation /// 0030426 // growth cone // inferred from electronic annotation /// 0031941 // filamentous actin // non-traceable author statement /// 0031965 // nuclear membrane // inferred from sequence or structural similarity /// 0031965 // nuclear membrane // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005518 // collagen binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation","chr11:77032591-77185365 (-) // 85.0 // q13.5"]
["11731540_at",11.191032,10.076157,7.6409087,10.872395,9.254541,9.0987835,0.21275377,0.061356068,-0.33777285,0.17108035,-0.06135583,-0.0858438,0.9614771,0.88133943,-1.0204328,-0.02918122,1.0204328,"down","SESTD1",91404.0,"0051925 // regulation of calcium ion transport via voltage-gated calcium channel activity // inferred from mutant phenotype","0034704 // calcium channel complex // inferred from physical interaction","0001786 // phosphatidylserine binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005545 // 1-phosphatidylinositol binding // inferred from direct assay /// 0005546 // phosphatidylinositol-4,5-bisphosphate binding // inferred from direct assay /// 0010314 // phosphatidylinositol-5-phosphate binding // inferred from direct assay /// 0031210 // phosphatidylcholine binding // inferred from direct assay /// 0032266 // phosphatidylinositol-3-phosphate binding // inferred from direct assay /// 0043325 // phosphatidylinositol-3,4-bisphosphate binding // inferred from direct assay /// 0070273 // phosphatidylinositol-4-phosphate binding // inferred from direct assay /// 0070300 // phosphatidic acid binding // inferred from direct assay /// 0080025 // phosphatidylinositol-3,5-bisphosphate binding // inferred from direct assay","chr2:179966420-180129517 (-) // 86.67 // q31.2"]
["11725347_a_at",944.27563,935.38544,901.0129,897.2067,836.4053,883.04,0.070714,0.057066917,0.0030536652,-0.0030536652,-0.104291916,-0.026015282,0.4176507,0.075751245,1.0629437,0.08806518,1.0629437,"up","TFDP1",7027.0,"0000080 // G1 phase of mitotic cell cycle // traceable author statement /// 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003713 // transcription coactivator activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from physical interaction","chr13:114238987-114295788 (+) // 90.18 // q34"]
["11755375_a_at",9.336957,10.457889,13.15959,9.361324,11.090041,10.853396,-0.19034481,-0.026777506,0.30474544,-0.18658447,0.05789566,0.026777506,0.90062255,0.7207329,1.0447648,0.06317814,1.0447648,"up","DGKH",160851.0,"0007205 // protein kinase C-activating G-protein coupled receptor signaling pathway // inferred from mutant phenotype /// 0007205 // protein kinase C-activating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0051259 // protein oligomerization // inferred from mutant phenotype","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0004143 // diacylglycerol kinase activity // inferred from mutant phenotype /// 0004143 // diacylglycerol kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr13:42729424-42803386 (+) // 96.93 // q14.11"]
["11727314_a_at",206.71875,195.65244,215.51965,209.35995,200.1837,222.01556,-0.009157658,-0.08853388,0.050992012,0.009158134,-0.05550289,0.09383345,0.8583216,0.623832,-1.0220007,-0.031396143,1.0220007,"down","ABCC5",10057.0,"0006200 // ATP catabolic process // inferred from electronic annotation /// 0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0015711 // organic anion transport // traceable author statement /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0032868 // response to insulin stimulus // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005624 // membrane fraction // inferred from direct assay /// 0005624 // membrane fraction // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0005524 // ATP binding // traceable author statement /// 0008514 // organic anion transmembrane transporter activity // traceable author statement /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0042626 // ATPase activity, coupled to transmembrane movement of substances // inferred from electronic annotation","chr3:183637721-183735803 (-) // 99.16 // q27.1"]
["11745576_at",14.708803,18.821966,15.696906,16.181448,18.532898,15.231706,-0.115730286,0.24000692,-0.02192998,0.021930218,0.21767807,-0.06533289,0.95704097,0.8680504,-1.016758,-0.023976292,1.016758,"down","KIRREL3-AS3",283165.0,"","","","chr11:126872804-126875953 (+) // 93.56 // q24.2"]
["11739591_s_at",258.86945,270.12622,291.22134,258.48163,282.8696,270.6757,-0.062874794,-0.0014657974,0.10701656,-0.06503773,0.06503773,0.0014657974,0.94589955,0.8361956,1.009567,0.01373669,1.009567,"up","MINA",84864.0,"0042254 // ribosome biogenesis // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay","","chr3:97660660-97691295 (-) // 99.04 // q11.2"]
["11718486_a_at",769.6254,754.60504,818.689,725.87445,743.0401,736.2129,0.039575577,0.011140823,0.12873459,-0.04486084,-0.011140823,-0.024457932,0.421797,0.07790555,1.0618919,0.08663692,1.0618919,"up","EI24",9538.0,"0006914 // autophagy // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0006917 // induction of apoptosis // traceable author statement /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0042493 // response to drug // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation","","chr11:125439111-125454579 (+) // 93.48 // q24.2"]
["11736828_x_at",181.17358,169.34622,190.13727,155.55798,168.9342,165.4766,0.099153996,0.0017571449,0.16882277,-0.12076616,-0.0017571449,-0.03159094,0.42344475,0.07881909,1.1028852,0.1412827,1.1028852,"up","ST3GAL1",6482.0,"0006464 // cellular protein modification process // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006486 // protein glycosylation // inferred from electronic annotation /// 0016266 // O-glycan processing // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0000139 // Golgi membrane // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030173 // integral to Golgi membrane // inferred from electronic annotation /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation","0003836 // beta-galactoside (CMP) alpha-2,3-sialyltransferase activity // inferred from electronic annotation /// 0003836 // beta-galactoside (CMP) alpha-2,3-sialyltransferase activity // traceable author statement /// 0008373 // sialyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation","chr8:134467090-134584183 (-) // 90.59 // q24.22"]
["11717923_s_at",1042.5955,1035.1191,1109.9519,988.73755,1006.6388,966.2758,0.030508041,0.02012539,0.12082577,-0.046011925,-0.02012539,-0.079164505,0.34270862,0.043578066,1.075932,0.10558693,1.075932,"up","YAP1",10413.0,"0001570 // vasculogenesis // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from direct assay /// 0008283 // cell proliferation // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0010837 // regulation of keratinocyte proliferation // inferred from electronic annotation /// 0030216 // keratinocyte differentiation // inferred from electronic annotation /// 0030857 // negative regulation of epithelial cell differentiation // inferred from electronic annotation /// 0035019 // somatic stem cell maintenance // inferred from electronic annotation /// 0035329 // hippo signaling cascade // traceable author statement /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0046622 // positive regulation of organ growth // inferred from electronic annotation /// 0060242 // contact inhibition // inferred from direct assay /// 0071480 // cellular response to gamma radiation // inferred from direct assay /// 0072091 // regulation of stem cell proliferation // inferred from electronic annotation /// 0090263 // positive regulation of canonical Wnt receptor signaling pathway // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0001076 // RNA polymerase II transcription factor binding transcription factor activity // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from electronic annotation /// 0003714 // transcription corepressor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0070064 // proline-rich region binding // inferred from electronic annotation","chr11:101981209-102104149 (+) // 91.79 // q22.1"]
["11724546_at",23.873003,20.083914,25.419552,27.973675,24.226677,22.250057,-0.010608196,-0.25994778,0.07995033,0.21808147,0.010608196,-0.11217928,0.8005577,0.5053376,-1.0735371,-0.102372065,1.0735371,"down","HCFC2",29915.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0016032 // viral reproduction // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0003713 // transcription coactivator activity // traceable author statement","chr12:104458234-104500299 (+) // 97.11 // q23.3"]
["11730716_a_at",9.964953,9.930624,8.602327,11.722527,11.8116045,10.401181,-0.030906439,-0.035884857,-0.24304223,0.20344234,0.21436405,0.0309062,0.36302203,0.051047996,-1.1915576,-0.25284874,1.1915576,"down","PAGE5",90737.0,"","","","chrX:55246788-55250533 (+) // 87.59 // p11.21"]
["11730612_a_at",231.2238,217.46758,215.41739,217.1133,212.08937,211.21361,0.09649801,0.008008003,-0.005656719,0.0056562424,-0.028119087,-0.03408909,0.59189504,0.20578223,1.0365577,0.05180039,1.0365577,"up","MBOAT7",79143.0,"0006644 // phospholipid metabolic process // inferred from electronic annotation /// 0008654 // phospholipid biosynthetic process // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0016747 // transferase activity, transferring acyl groups other than amino-acyl groups // inferred from electronic annotation","chr19:54681993-54693733 (-) // 82.66 // q13.42"]
["11718387_s_at",480.46548,468.35913,469.0296,477.38287,474.63684,476.95044,0.014101028,-0.022716522,-0.020652771,0.0048151016,-0.0035076141,0.0035076141,0.74266934,0.4051373,-1.007906,-0.011361038,1.007906,"down","ZFYVE20",64145.0,"0006810 // transport // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016197 // endosomal transport // non-traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005768 // endosome // non-traceable author statement /// 0005768 // endosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0010008 // endosome membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0017137 // Rab GTPase binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:15111579-15140664 (-) // 84.74 // p25.1"]
["11715842_a_at",329.1143,332.36157,329.34717,339.5406,316.3352,316.13367,-5.1021576E-4,0.013654709,5.1021576E-4,0.044485092,-0.057644844,-0.058564186,0.7737935,0.45577696,1.0199225,0.028459525,1.0199225,"up","MAPK1",5594.0,"0000165 // MAPK cascade // traceable author statement /// 0000165 // MAPK cascade // inferred from electronic annotation /// 0000186 // activation of MAPKK activity // traceable author statement /// 0000187 // activation of MAPK activity // traceable author statement /// 0000189 // MAPK import into nucleus // inferred from electronic annotation /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // traceable author statement /// 0006935 // chemotaxis // traceable author statement /// 0006950 // response to stress // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007265 // Ras protein signal transduction // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008063 // Toll signaling pathway // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0009636 // response to toxin // inferred from electronic annotation /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0010800 // positive regulation of peptidyl-threonine phosphorylation // inferred from direct assay /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from direct assay /// 0019233 // sensory perception of pain // inferred from electronic annotation /// 0019858 // cytosine metabolic process // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0031663 // lipopolysaccharide-mediated signaling pathway // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0032872 // regulation of stress-activated MAPK cascade // traceable author statement /// 0033598 // mammary gland epithelial cell proliferation // inferred from electronic annotation /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0042221 // response to chemical stimulus // inferred from electronic annotation /// 0043330 // response to exogenous dsRNA // inferred from electronic annotation /// 0043627 // response to estrogen stimulus // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045596 // negative regulation of cell differentiation // inferred from electronic annotation /// 0045727 // positive regulation of translation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0050852 // T cell receptor signaling pathway // inferred from electronic annotation /// 0050853 // B cell receptor signaling pathway // inferred from electronic annotation /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // traceable author statement /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0051493 // regulation of cytoskeleton organization // traceable author statement /// 0060397 // JAK-STAT cascade involved in growth hormone signaling pathway // traceable author statement /// 0060716 // labyrinthine layer blood vessel development // inferred from electronic annotation /// 0070371 // ERK1 and ERK2 cascade // inferred from direct assay /// 0070371 // ERK1 and ERK2 cascade // traceable author statement /// 0072584 // caveolin-mediated endocytosis // traceable author statement /// 0090170 // regulation of Golgi inheritance // traceable author statement /// 2000641 // regulation of early endosome to late endosome transport // traceable author statement","0005625 // soluble fraction // inferred from electronic annotation /// 0005626 // insoluble fraction // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005769 // early endosome // traceable author statement /// 0005770 // late endosome // traceable author statement /// 0005794 // Golgi apparatus // traceable author statement /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005856 // cytoskeleton // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005901 // caveola // traceable author statement /// 0005925 // focal adhesion // traceable author statement /// 0031143 // pseudopodium // inferred from electronic annotation /// 0032839 // dendrite cytoplasm // inferred from electronic annotation /// 0033267 // axon part // inferred from electronic annotation /// 0043204 // perikaryon // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0001784 // phosphotyrosine binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004707 // MAP kinase activity // inferred from electronic annotation /// 0004707 // MAP kinase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0008353 // RNA polymerase II carboxy-terminal domain kinase activity // inferred from sequence or structural similarity /// 0008353 // RNA polymerase II carboxy-terminal domain kinase activity // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019902 // phosphatase binding // inferred from physical interaction /// 0031435 // mitogen-activated protein kinase kinase kinase binding // inferred from electronic annotation","chr22:22108791-22221970 (-) // 87.22 // q11.21"]
["11722863_at",6.0068164,6.8605413,5.822103,5.460438,5.8089557,6.277271,0.022530079,0.214252,-0.022530079,-0.11505389,-0.025791645,0.08606696,0.7324496,0.38965654,1.0641319,0.089676924,1.0641319,"up","SCGB2A1",4246.0,"","","0005496 // steroid binding // inferred from electronic annotation /// 0005497 // androgen binding // non-traceable author statement","chr11:61976144-61981415 (+) // 94.72 // q12.3"]
["11751154_x_at",270.55655,271.9742,300.1407,257.95044,274.7703,243.4261,-0.0037698746,0.0037698746,0.14593887,-0.07260609,0.018526077,-0.15621614,0.5489615,0.16563839,1.0857899,0.11874499,1.0857899,"up","ALDOC",230.0,"0001666 // response to hypoxia // inferred from electronic annotation /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0006000 // fructose metabolic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006094 // gluconeogenesis // traceable author statement /// 0006096 // glycolysis // inferred from electronic annotation /// 0006096 // glycolysis // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0010243 // response to organic nitrogen // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0030388 // fructose 1,6-bisphosphate metabolic process // inferred from direct assay /// 0031100 // organ regeneration // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0051289 // protein homotetramerization // inferred from electronic annotation /// 0051290 // protein heterotetramerization // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred by curator /// 0030424 // axon // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004332 // fructose-bisphosphate aldolase activity // inferred from direct assay /// 0004332 // fructose-bisphosphate aldolase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008092 // cytoskeletal protein binding // inferred from direct assay /// 0016829 // lyase activity // inferred from electronic annotation","chr17:26900134-26903912 (-) // 99.42 // q11.2"]
["11726904_a_at",554.78925,557.69775,559.0409,552.20105,550.8743,565.2125,-0.003771782,0.003771782,0.0072422028,-0.010518074,-0.013988495,0.02308178,0.9423139,0.8252795,1.0020045,0.0028889936,1.0020045,"up","COBL",23242.0,"0001843 // neural tube closure // inferred from electronic annotation","","0003779 // actin binding // inferred from electronic annotation","chr7:51083909-51384515 (-) // 99.51 // p12.1"]
["11753940_a_at",13.967868,14.46094,16.431095,15.557569,14.744435,14.961882,-0.08861923,-0.03856969,0.1456976,0.06688523,-0.010560513,0.010560751,0.9475308,0.84006923,-1.0112401,-0.016125614,1.0112401,"down","NRL",4901.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007468 // regulation of rhodopsin gene expression // traceable author statement /// 0007468 // regulation of rhodopsin gene expression // inferred from electronic annotation /// 0007601 // visual perception // inferred from electronic annotation /// 0007601 // visual perception // traceable author statement /// 0045872 // positive regulation of rhodopsin gene expression // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046548 // retinal rod cell development // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043522 // leucine zipper domain binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr14:24549316-24584223 (-) // 91.15 // q11.2"]
["11751357_a_at",41.58262,41.087257,44.457405,41.087257,47.7742,44.06383,-0.041807175,-0.059096813,0.054636,-0.059096813,0.15844393,0.041807175,0.7613903,0.43526956,-1.044255,-0.062474076,1.044255,"down","MEI1",150365.0,"0007126 // meiosis // inferred from electronic annotation /// 0007141 // male meiosis I // inferred from electronic annotation /// 0007276 // gamete generation // inferred from electronic annotation /// 0007286 // spermatid development // inferred from electronic annotation","","","chr22:42148507-42177849 (+) // 98.98 // q13.2"]
["11727430_s_at",9.447256,9.43399,9.495478,9.390476,10.292716,9.682352,-0.0036723614,-0.0057001114,0.0036725998,-0.012369633,0.11998367,0.03178978,0.6572862,0.28278145,-1.0340945,-0.048367966,1.0340945,"down","C6orf162",57150.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr6:88046724-88052041 (+) // 91.8 // q15"]
["11721103_a_at",74.31753,71.76857,63.228035,68.02918,64.27074,68.56874,0.121850014,0.071499825,-0.11128855,-0.005698681,-0.08769035,0.005698204,0.79898065,0.50158095,1.0400003,0.05658397,1.0400003,"up","POLDIP3",84271.0,"0006417 // regulation of translation // inferred from electronic annotation /// 0045727 // positive regulation of translation // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation /// 0035145 // exon-exon junction complex // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr22:42979727-43010962 (-) // 99.49 // q13.2"]
["11755049_a_at",346.97693,339.45663,335.51758,343.5589,350.44284,371.24658,0.0071411133,-0.024471283,-0.04131031,-0.0071411133,0.02148056,0.10467911,0.5641903,0.17927155,-1.0419021,-0.059219677,1.0419021,"down","PIK3C3",5289.0,"0000045 // autophagic vacuole assembly // inferred from electronic annotation /// 0000910 // cytokinesis // inferred from mutant phenotype /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006914 // autophagy // inferred from electronic annotation /// 0007032 // endosome organization // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0036092 // phosphatidylinositol-3-phosphate biosynthetic process // inferred from mutant phenotype /// 0036092 // phosphatidylinositol-3-phosphate biosynthetic process // traceable author statement /// 0036092 // phosphatidylinositol-3-phosphate biosynthetic process // inferred from electronic annotation /// 0043201 // response to leucine // inferred from electronic annotation /// 0045022 // early endosome to late endosome transport // inferred from mutant phenotype /// 0045087 // innate immune response // traceable author statement /// 0046854 // phosphatidylinositol phosphorylation // inferred from electronic annotation /// 0048015 // phosphatidylinositol-mediated signaling // inferred from electronic annotation /// 0050708 // regulation of protein secretion // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0005768 // endosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from direct assay /// 0005770 // late endosome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0030496 // midbody // inferred from direct assay /// 0030496 // midbody // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016303 // 1-phosphatidylinositol-3-kinase activity // inferred from mutant phenotype /// 0016303 // 1-phosphatidylinositol-3-kinase activity // inferred from electronic annotation /// 0016303 // 1-phosphatidylinositol-3-kinase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0016773 // phosphotransferase activity, alcohol group as acceptor // inferred from electronic annotation /// 0035004 // phosphatidylinositol 3-kinase activity // inferred from electronic annotation","chr18:39605275-39661443 (+) // 79.99 // q12.3"]
["11764109_at",6.573929,6.704094,7.4370236,6.885893,6.756855,6.977384,-0.05324197,-0.024955511,0.12472749,0.013645887,-0.013645887,0.03268838,0.981864,0.9391924,1.0032033,0.0046139597,1.0032033,"up","","","","","","chr6:163789337-163789753 (-) // 99.52 // q26"]
["11749470_a_at",11.366038,11.904214,9.726551,10.943701,10.782239,11.619115,0.027314186,0.09405732,-0.19741488,-0.027314186,-0.048758507,0.059084892,0.94899637,0.84455776,-1.0137383,-0.019685227,1.0137383,"down","TRPM8",79054.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0006874 // cellular calcium ion homeostasis // inferred from electronic annotation /// 0009266 // response to temperature stimulus // inferred from electronic annotation /// 0009409 // response to cold // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050955 // thermoception // inferred from electronic annotation /// 0051289 // protein homotetramerization // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0070207 // protein homotrimerization // inferred from electronic annotation /// 0070588 // calcium ion transmembrane transport // inferred from electronic annotation","0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005262 // calcium channel activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation","chr2:234826049-234925973 (+) // 96.93 // q37.1"]
["11750933_a_at",105.73275,84.90518,109.87351,103.99785,111.9227,94.54709,0.011934757,-0.30456352,0.06735563,-0.01193428,0.09401417,-0.14938307,0.899722,0.71754026,-1.037173,-0.0526566,1.037173,"down","ZNF480",147657.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:52800431-52826411 (+) // 95.51 // q13.41"]
["11746026_x_at",10.33546,9.835206,10.001163,9.894561,12.477636,10.372157,0.023717403,-0.047858,-0.023717403,-0.03917718,0.29545975,0.028830767,0.7055964,0.34706286,-1.0799694,-0.11099044,1.0799694,"down",-0.023717403,"MILR1",284021.0,"0033004 // negative regulation of mast cell activation // inferred from sequence or structural similarity /// 0043303 // mast cell degranulation // inferred from sequence or structural similarity","0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from sequence or structural similarity"]
["11723087_at",59.630787,61.09502,63.156185,63.76034,59.731407,59.14398,-0.018714905,0.016283035,0.064151764,0.07788706,-0.016282558,-0.03054142,0.9396539,0.818218,1.0071083,0.010218876,1.0071083,"up","GAS2L1",10634.0,"0001578 // microtubule bundle formation // inferred from mutant phenotype /// 0007026 // negative regulation of microtubule depolymerization // inferred from mutant phenotype /// 0007050 // cell cycle arrest // inferred from sequence or structural similarity /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0009267 // cellular response to starvation // inferred from sequence or structural similarity /// 0009267 // cellular response to starvation // inferred from electronic annotation /// 0010629 // negative regulation of gene expression // inferred from direct assay /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0045647 // negative regulation of erythrocyte differentiation // inferred from direct assay /// 0051726 // regulation of cell cycle // inferred from direct assay /// 0097067 // cellular response to thyroid hormone stimulus // inferred from direct assay","0001725 // stress fiber // inferred from direct assay /// 0001725 // stress fiber // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0005874 // microtubule // inferred from electronic annotation","0008017 // microtubule binding // inferred from direct assay /// 0008093 // cytoskeletal adaptor activity // inferred from direct assay /// 0046966 // thyroid hormone receptor binding // inferred from direct assay","chr22:29702346-29708776 (+) // 89.67 // q12.2"]
["11749176_a_at",264.86374,238.8935,273.92792,256.0721,258.70728,261.09222,0.027310371,-0.121572495,0.07585621,-0.021389961,-0.0066194534,0.0066194534,0.9959929,0.98755556,1.0006897,9.947486E-4,1.0006897,"up","RIOK3",8780.0,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0007059 // chromosome segregation // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation","","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr18:21033250-21061544 (+) // 99.95 // q11.2"]
["11719577_a_at",109.154976,112.295204,97.88744,109.75432,104.03856,109.546906,-0.002585411,0.038333416,-0.15976763,0.005314827,-0.071845055,0.002585411,0.9244638,0.7749262,-1.013977,-0.020025,1.013977,"down","AMT",275.0,"0006546 // glycine catabolic process // inferred from electronic annotation /// 0006546 // glycine catabolic process // traceable author statement /// 0032259 // methylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005739 // mitochondrion // traceable author statement","0004047 // aminomethyltransferase activity // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008483 // transaminase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr3:49454210-49460111 (-) // 94.96 // p21.31"]
["11741646_s_at",15.293975,15.293975,15.9678955,15.293975,11.103414,13.539871,0.0,0.0,0.062211037,0.0,-0.46196008,-0.1757493,0.5457615,0.16189778,1.1755263,0.23330677,1.1755263,"up","ATXN7L1",222255.0,"","","","chr7:105245220-105319653 (-) // 98.34 // q22.3"]
["11720729_at",64.587135,69.87399,67.37407,60.09921,76.387,66.2422,-0.04872513,0.06478357,0.012221813,-0.15262604,0.19335508,-0.012221336,0.9997709,0.99946195,-1.0000526,-7.5842356E-5,1.0000526,"down","CSDC2",27254.0,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006398 // histone mRNA 3'-end processing // non-traceable author statement","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // non-traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation","chr22:41956766-41972670 (+) // 96.31 // q13.2"]
["11729235_s_at",65.35319,60.7301,63.669872,70.874016,62.777557,63.949062,0.034490585,-0.071354866,-0.0031561852,0.15148973,-0.023518562,0.0031561852,0.7484818,0.41390508,-1.0403358,-0.05704924,1.0403358,"down","E2F6",1876.0,"0000083 // regulation of transcription involved in G1/S phase of mitotic cell cycle // inferred from electronic annotation /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0071339 // MLL1 complex // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003714 // transcription corepressor activity // traceable author statement","chr2:11584500-11606303 (-) // 83.35 // p25.1"]
["11719930_a_at",571.64496,558.4304,586.9233,567.7079,537.7964,537.1753,0.021856308,-0.011885643,0.059908867,0.011885643,-0.06620312,-0.06787014,0.5021729,0.1285951,1.0453763,0.064022355,1.0453763,"up","ARGLU1",55082.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","","chr13:107194928-107220512 (-) // 94.79 // q33.3"]
["11733612_s_at",119.70736,125.46332,126.752495,137.47455,131.44295,141.35358,-0.10871363,-0.04095936,-0.026211262,0.09093952,0.026211262,0.13108301,0.27341905,0.023623383,-1.102954,-0.14137267,1.102954,"down","DOCK8",81704.0,"0007596 // blood coagulation // traceable author statement","0005829 // cytosol // traceable author statement","0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0051020 // GTPase binding // inferred from electronic annotation","chr9:214864-465255 (+) // 98.62 // p24.3"]
["11745881_a_at",51.940353,46.842743,48.376095,44.881428,51.39522,45.840622,0.12579584,-0.023234367,0.023234367,-0.08494139,0.110574245,-0.054433346,0.8139013,0.5298309,1.0363649,0.05153208,1.0363649,"up","GUCA1A",2978.0,"0007165 // signal transduction // non-traceable author statement /// 0007601 // visual perception // inferred from electronic annotation /// 0007601 // visual perception // traceable author statement /// 0007602 // phototransduction // inferred from electronic annotation /// 0031282 // regulation of guanylate cyclase activity // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation /// 0008048 // calcium sensitive guanylate cyclase activator activity // traceable author statement /// 0008048 // calcium sensitive guanylate cyclase activator activity // inferred from electronic annotation /// 0030249 // guanylate cyclase regulator activity // inferred from electronic annotation","chr6:42123183-42147806 (+) // 92.41 // p21.1"]
["11750096_a_at",7.8923736,8.16147,8.217469,7.894848,8.304474,7.999656,-0.03392434,0.014445543,0.024310589,-0.0334723,0.039505243,-0.014445543,0.9622385,0.8836322,1.0030648,0.0044147405,1.0030648,"up","CTNND2",1501.0,"0001763 // morphogenesis of a branching structure // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007158 // neuron cell-cell adhesion // non-traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007612 // learning // inferred from electronic annotation /// 0048167 // regulation of synaptic plasticity // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005912 // adherens junction // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0043204 // perikaryon // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr5:10972992-11904092 (-) // 99.76 // p15.2"]
["11723609_a_at",6.7317753,6.559821,6.2014623,6.269439,5.7191563,6.061237,0.11051464,0.07318401,-0.007863998,0.007863998,-0.12467003,-0.040860176,0.45798084,0.099984944,1.0801015,0.11116688,1.0801015,"up","HABP2",3026.0,"0006508 // proteolysis // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement","0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0005539 // glycosaminoglycan binding // traceable author statement /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr10:115312736-115349367 (+) // 99.84 // q25.3"]
["11727450_a_at",44.59474,46.109035,40.591595,46.710835,43.415905,47.709946,-0.024087906,0.024087906,-0.1597805,0.042795658,-0.06273794,0.073328495,0.7138296,0.35986087,-1.050485,-0.07105558,1.050485,"down","MORN4",118812.0,"","","","chr10:99374311-99393344 (-) // 79.38 // q24.2"]
["11736473_a_at",12.84714,12.548165,12.796356,10.719186,12.426732,12.3968935,0.040985584,0.0070147514,0.035271406,-0.22026634,-0.0070147514,-0.010483265,0.59357643,0.20773776,1.0769954,0.10701205,1.0769954,"up","TCF7",6932.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // not recorded /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // not recorded /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006955 // immune response // traceable author statement /// 0007420 // brain development // not recorded /// 0016055 // Wnt receptor signaling pathway // not recorded /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0021915 // neural tube development // inferred from electronic annotation /// 0022008 // neurogenesis // not recorded /// 0030538 // embryonic genitalia morphogenesis // inferred from electronic annotation /// 0033153 // T cell receptor V(D)J recombination // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0046632 // alpha-beta T cell differentiation // inferred from electronic annotation /// 0048557 // embryonic digestive tract morphogenesis // inferred from electronic annotation /// 0048619 // embryonic hindgut morphogenesis // inferred from electronic annotation /// 0048699 // generation of neurons // not recorded /// 0060070 // canonical Wnt receptor signaling pathway // not recorded /// 0071353 // cellular response to interleukin-4 // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // not recorded","0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // not recorded /// 0003700 // sequence-specific DNA binding transcription factor activity // not recorded /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008013 // beta-catenin binding // not recorded /// 0043565 // sequence-specific DNA binding // not recorded /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay","chr5:133451300-133483919 (+) // 89.87 // q31.1"]
["11739863_a_at",440.518,436.56247,424.37408,439.8319,434.31845,416.70724,0.016730309,0.0037174225,-0.03713417,0.0144815445,-0.0037174225,-0.06343651,0.8897415,0.69631404,1.0083492,0.011995315,1.0083492,"up","TTF2",8458.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006353 // transcription termination, DNA-dependent // traceable author statement /// 0006353 // transcription termination, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0008023 // transcription elongation factor complex // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0008094 // DNA-dependent ATPase activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr1:117602948-117645489 (+) // 89.78 // p13.1"]
["11735984_at",18.826092,21.073137,13.34942,23.380356,20.290298,23.3595,-0.13536406,0.02730751,-0.6313205,0.17719936,-0.02730751,0.1759119,0.5485808,0.16521943,-1.279039,-0.35506028,1.279039,"down","OR2B6",26212.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr6:27925018-27925960 (+) // 99.16 // p22.1"]
["11727105_s_at",9.419379,9.126396,8.5090065,8.96324,11.086563,9.835208,0.022793293,-0.022793293,-0.12384796,-0.04881835,0.25790167,0.08511686,0.6167138,0.23118901,-1.1014082,-0.13934931,1.1014082,"down","FGD5",152273.0,"0007010 // cytoskeleton organization // inferred from sequence or structural similarity /// 0008360 // regulation of cell shape // inferred from sequence or structural similarity /// 0030036 // actin cytoskeleton organization // inferred from sequence or structural similarity /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0043088 // regulation of Cdc42 GTPase activity // inferred from sequence or structural similarity /// 0046847 // filopodium assembly // inferred from sequence or structural similarity","0001726 // ruffle // inferred from sequence or structural similarity /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from sequence or structural similarity /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from sequence or structural similarity","0005085 // guanyl-nucleotide exchange factor activity // inferred from sequence or structural similarity /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0031267 // small GTPase binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:14860482-14976072 (+) // 98.53 // p25.1"]
["11756401_x_at",1014.9132,1000.5222,1077.0228,991.04614,1005.3088,1007.684,0.012015343,-0.008587837,0.09770775,-0.022316933,-0.0017023087,0.0017023087,0.6593463,0.28539848,1.0289342,0.041150782,1.0289342,"up","FAM49B",51571.0,"","","","chr8:130853718-131028697 (-) // 70.01 // q24.21"]
["11735552_at",6.9701104,7.308718,6.224345,6.968552,6.4549913,6.501937,0.050317287,0.11875415,-0.11294222,0.049994707,-0.060449123,-0.049994707,0.86550677,0.64123905,1.0273013,0.03885939,1.0273013,"up","FCRL6",343413.0,"","0009897 // external side of plasma membrane // inferred from direct assay /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0019903 // protein phosphatase binding // inferred from electronic annotation","chr1:159770301-159786047 (+) // 84.62 // q23.2"]
["11757770_s_at",1175.227,1178.8739,1228.9669,1164.5288,1238.1232,1185.0416,-0.008234024,-0.0037641525,0.056272507,-0.021427155,0.066981316,0.0037641525,0.9887081,0.9624078,-1.0011661,-0.0016813541,1.0011661,"down","TOMM70A",9868.0,"0006626 // protein targeting to mitochondrion // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005742 // mitochondrial outer membrane translocase complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008320 // protein transmembrane transporter activity // traceable author statement","chr3:100082307-100082909 (-) // 90.92 // q12.2"]
["11728073_a_at",154.48227,159.77592,155.13599,162.2074,164.09099,167.05574,-0.059504032,-0.010894775,-0.053411484,0.010894775,0.027551174,0.05338478,0.2655409,0.02165616,-1.0510857,-0.07188032,1.0510857,"down","ITPRIP",85450.0,"","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","","chr10:106071900-106093713 (-) // 98.8 // q25.1"]
["11743191_a_at",9.898153,8.167214,8.466136,9.604205,7.556877,8.409995,0.23025465,-0.04706049,0.004799366,0.18676162,-0.15911436,-0.004799366,0.8898519,0.69667685,1.038894,0.05504854,1.038894,"up","LOC100653217 /// NTM","100653217 /// 50863","0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // non-traceable author statement /// 0008038 // neuron recognition // traceable author statement","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031225 // anchored to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr11:131780518-132206715 (+) // 96.55 // q25"]
["11721561_a_at",184.69644,201.1071,212.07507,203.40454,224.52643,200.65767,-0.13100195,-0.008193493,0.06841707,0.00819397,0.15072727,-0.01142168,0.7397124,0.4001776,-1.0517263,-0.07275937,1.0517263,"down","AHCYL2",23382.0,"0006730 // one-carbon metabolic process // inferred from electronic annotation","","0000166 // nucleotide binding // inferred from electronic annotation /// 0004013 // adenosylhomocysteinase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr7:128864870-129070051 (+) // 93.63 // q32.1"]
["11740776_a_at",31.261019,34.446934,28.593597,31.461048,35.726097,35.007946,-0.07460642,0.065404415,-0.20327902,-0.065404415,0.11800718,0.08871126,0.6608797,0.28749838,-1.085178,-0.11793172,1.085178,"down","CCDC36",339834.0,"","","","chr3:49235860-49295537 (+) // 94.67 // p21.31"]
["11750796_a_at",242.7784,245.64583,242.8377,229.11554,229.84299,240.05669,0.008132458,0.025073051,0.008485317,-0.075431824,-0.07085848,-0.008131981,0.34242314,0.043422453,1.046354,0.065371096,1.046354,"up","DNER",92737.0,"0001764 // neuron migration // non-traceable author statement /// 0006897 // endocytosis // non-traceable author statement /// 0007219 // Notch signaling pathway // traceable author statement /// 0007219 // Notch signaling pathway // inferred from electronic annotation /// 0007220 // Notch receptor processing // inferred from electronic annotation /// 0007416 // synapse assembly // non-traceable author statement /// 0007417 // central nervous system development // inferred from expression pattern /// 0010001 // glial cell differentiation // inferred from electronic annotation /// 0048741 // skeletal muscle fiber development // inferred from electronic annotation","0005769 // early endosome // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030425 // dendrite // inferred from direct assay /// 0030425 // dendrite // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // traceable author statement /// 0005112 // Notch binding // inferred from electronic annotation /// 0005509 // calcium ion binding // non-traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0030276 // clathrin binding // traceable author statement","chr2:230222831-230451615 (-) // 97.71 // q36.3"]
["11756636_x_at",162.22939,160.78001,161.19418,165.99492,171.70737,157.32843,0.004617691,-0.0083293915,-0.004617691,0.037721634,0.0865345,-0.03963852,0.769199,0.44875064,-1.0217075,-0.030982282,1.0217075,"down","PCED1A",64773.0,"","","0016787 // hydrolase activity // inferred from electronic annotation","chr20:2816005-2821314 (-) // 93.58 // p13"]
["11730313_a_at",47.158714,42.761173,48.882774,56.64965,49.499943,54.329803,-0.06085205,-0.202075,-0.009050369,0.20369053,0.009050369,0.14336729,0.38975963,0.061976224,-1.1561767,-0.20936188,1.1561767,"down","ERMAP",114625.0,"","0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","","chr1:43282758-43310655 (+) // 82.7 // p34.2"]
["11734540_at",10.764091,10.729039,11.441215,12.551077,10.101578,10.992379,-0.015138388,-0.019844294,0.07287526,0.20644593,-0.10678434,0.015138626,0.9342806,0.80267185,-1.0179282,-0.025635865,1.0179282,"down","LOC728819",728819.0,"","","","chr2:43902291-43903461 (-) // 83.18 // p21"]
["11715925_a_at",1373.127,1370.1628,1458.8428,1313.2942,1326.004,1292.4679,0.026748657,0.023631096,0.114108086,-0.03752613,-0.023631096,-0.060587883,0.3300409,0.039008114,1.0683697,0.095411025,1.0683697,"up","TRAM1",23471.0,"0006412 // translation // traceable author statement /// 0006613 // cotranslational protein targeting to membrane // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation","0005783 // endoplasmic reticulum // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0004872 // receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr8:71485454-71520714 (-) // 92.64 // q13.3"]
["11745325_a_at",25.04537,27.939346,27.169157,32.124603,27.893747,28.535337,-0.15657616,0.0011782646,-0.039150238,0.20255852,-0.0011782646,0.031629562,0.52490205,0.1452333,-1.103831,-0.14251937,1.103831,"down","ZNF497",162968.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:58866926-58874214 (-) // 99.96 // q13.43"]
["11752744_a_at",452.7428,448.4492,447.95203,459.2682,448.85904,442.66412,0.013088226,-6.5898895E-4,-0.0022592545,0.033733368,6.5898895E-4,-0.01939106,0.9768119,0.92576224,-1.0011169,-0.0016104063,1.0011169,"down","LGMN",5641.0,"0001101 // response to acid // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0006508 // proteolysis // inferred from sequence or structural similarity /// 0008202 // steroid metabolic process // traceable author statement /// 0040015 // negative regulation of multicellular organism growth // inferred from electronic annotation /// 0042359 // vitamin D metabolic process // traceable author statement /// 0043524 // negative regulation of neuron apoptotic process // inferred from genetic interaction /// 0044281 // small molecule metabolic process // traceable author statement /// 0045087 // innate immune response // traceable author statement","0005764 // lysosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from electronic annotation /// 0043202 // lysosomal lumen // traceable author statement /// 0045177 // apical part of cell // inferred from electronic annotation","0004197 // cysteine-type endopeptidase activity // inferred from electronic annotation /// 0004197 // cysteine-type endopeptidase activity // inferred from sequence or structural similarity /// 0008233 // peptidase activity // inferred from direct assay /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr14:93170472-93214972 (-) // 95.86 // q32.12"]
["11736147_s_at",250.17537,258.37384,290.92984,271.9557,265.00122,269.24002,-0.09450674,-0.04798603,0.12322521,0.025925636,-0.011446953,0.011446953,0.9451003,0.8333366,-1.0104965,-0.0150643205,1.0104965,"down","LYRM2 /// ZC3H11A","57226 /// 9877","","0005739 // mitochondrion // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:90341944-90348475 (-) // 64.9 // q15"]
["11727772_a_at",17.76962,27.59655,20.436827,24.490059,23.417997,21.38357,-0.33264732,0.30242777,-0.13088894,0.13013601,0.06555748,-0.06555748,0.8686345,0.64634514,-1.0696075,-0.09708148,1.0696075,"down","PITPNM2",57605.0,"0006810 // transport // inferred from electronic annotation /// 0008152 // metabolic process // non-traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005625 // soluble fraction // inferred from electronic annotation /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0005509 // calcium ion binding // non-traceable author statement /// 0008289 // lipid binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:123468026-123634562 (-) // 98.54 // q24.31"]
["11747878_a_at",88.344,88.73854,91.61757,96.0777,101.93886,84.85609,-0.02946043,-0.023031712,0.023031712,0.09160948,0.1770401,-0.08757448,0.75813997,0.42831013,-1.0498465,-0.07017844,1.0498465,"down","STX3",6809.0,"0006810 // transport // inferred from electronic annotation /// 0006836 // neurotransmitter transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006887 // exocytosis // inferred from electronic annotation /// 0006944 // cellular membrane fusion // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from sequence or structural similarity /// 0031175 // neuron projection development // inferred from electronic annotation /// 0034599 // cellular response to oxidative stress // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005773 // vacuole // traceable author statement /// 0005911 // cell-cell junction // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from direct assay /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0030426 // growth cone // inferred from sequence or structural similarity /// 0030426 // growth cone // inferred from electronic annotation /// 0031201 // SNARE complex // inferred from sequence or structural similarity /// 0031201 // SNARE complex // inferred from electronic annotation /// 0042581 // specific granule // inferred from direct assay /// 0042582 // azurophil granule // inferred from direct assay /// 0043005 // neuron projection // inferred from sequence or structural similarity /// 0043005 // neuron projection // inferred from electronic annotation","0005484 // SNAP receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0050544 // arachidonic acid binding // inferred from sequence or structural similarity /// 0050544 // arachidonic acid binding // inferred from electronic annotation","chr11:59522924-59568958 (+) // 96.76 // q12.1"]
["11715826_x_at",2194.2266,2144.3237,2191.0437,2201.1912,2192.6838,2194.3428,5.0735474E-4,-0.03268242,-0.0015869141,0.0050792694,-5.0735474E-4,5.836487E-4,0.6695949,0.2985151,-1.0090324,-0.0129724555,1.0090324,"down","HMG20B",10362.0,"0006325 // chromatin organization // non-traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0016568 // chromatin modification // inferred from electronic annotation","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr19:3572942-3579233 (+) // 92.13 // p13.3"]
["11751973_x_at",59.31561,67.24415,63.00657,56.59936,62.072037,60.51316,-0.04718399,0.13381338,0.0399065,-0.11480951,0.018347263,-0.018346786,0.6609372,0.28755015,1.0573466,0.080448344,1.0573466,"up","PROSAPIP1",9762.0,"0051260 // protein homooligomerization // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from sequence or structural similarity /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0030165 // PDZ domain binding // inferred from electronic annotation /// 0043621 // protein self-association // inferred from electronic annotation","chr20:3143274-3154194 (-) // 95.54 // p13"]
["11720944_at",9.351182,9.56494,10.634939,10.5147,10.167662,9.355963,-0.076687336,-0.04408002,0.108903885,0.09249997,0.04408002,-0.07594991,0.9206134,0.7665029,-1.0168906,-0.024164543,1.0168906,"down","RGS16",6004.0,"0007601 // visual perception // traceable author statement /// 0008277 // regulation of G-protein coupled receptor protein signaling pathway // traceable author statement /// 0009968 // negative regulation of signal transduction // inferred from electronic annotation /// 0038032 // termination of G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // not recorded /// 0043547 // positive regulation of GTPase activity // traceable author statement","0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // not recorded /// 0005886 // plasma membrane // not recorded /// 0045121 // membrane raft // inferred from electronic annotation","0005096 // GTPase activator activity // not recorded /// 0005096 // GTPase activator activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // traceable author statement","chr1:182567757-182573548 (-) // 88.47 // q25.3"]
["11719697_a_at",879.2086,849.91876,908.3879,892.2321,897.7074,864.5405,-0.010606766,-0.059487343,0.036496162,0.010606766,0.019433022,-0.03487873,0.92699623,0.78217125,-1.0066669,-0.009586382,1.0066669,"down","HSPB11",51668.0,"0006950 // response to stress // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation","0005929 // cilium // inferred from electronic annotation /// 0030992 // intraflagellar transport particle B // inferred from electronic annotation","","chr1:54387233-54411602 (-) // 73.84 // p32.3"]
["11750814_a_at",8.271536,8.029126,8.259784,7.4422083,9.076227,8.407068,0.0010254383,-0.041886568,-0.0010254383,-0.1513989,0.13496327,0.02447319,0.95131165,0.85355157,-1.0116017,-0.016641347,1.0116017,"down","BEND2",139105.0,"","","","chrX:18189058-18238956 (-) // 92.07 // p22.13"]
["11760040_x_at",44.030056,42.423653,43.440994,42.384186,41.611256,50.60179,0.036525726,-0.017094135,0.017094135,-0.018436909,-0.04498911,0.23722553,0.8665095,0.6426678,-1.0322254,-0.045757994,1.0322254,"down","NDUFB4",4710.0,"0006120 // mitochondrial electron transport, NADH to ubiquinone // non-traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from direct assay /// 0022900 // electron transport chain // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005747 // mitochondrial respiratory chain complex I // inferred from direct assay /// 0005747 // mitochondrial respiratory chain complex I // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0070469 // respiratory chain // inferred from electronic annotation","0008137 // NADH dehydrogenase (ubiquinone) activity // non-traceable author statement /// 0008137 // NADH dehydrogenase (ubiquinone) activity // inferred from electronic annotation","chr3:120315156-120320471 (+) // 99.33 // q13.33"]
["11740214_a_at",340.07428,335.48697,360.66568,296.2504,283.27585,281.8043,0.10931301,0.08971977,0.19412518,-0.08971977,-0.1543293,-0.1618433,0.12042403,0.0024919873,1.202761,0.26635006,1.202761,"up","TBL1X",6907.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006508 // proteolysis // inferred from mutant phenotype /// 0007219 // Notch signaling pathway // traceable author statement /// 0007605 // sensory perception of sound // inferred from mutant phenotype /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from sequence or structural similarity /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0043627 // response to estrogen stimulus // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045444 // fat cell differentiation // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048545 // response to steroid hormone stimulus // inferred from electronic annotation /// 0060070 // canonical Wnt receptor signaling pathway // inferred from mutant phenotype","0000118 // histone deacetylase complex // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005876 // spindle microtubule // inferred from direct assay /// 0017053 // transcriptional repressor complex // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003714 // transcription corepressor activity // inferred from direct assay /// 0003714 // transcription corepressor activity // inferred from genetic interaction /// 0003714 // transcription corepressor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008013 // beta-catenin binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0042393 // histone binding // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from electronic annotation","chrX:9431105-9687780 (+) // 97.47 // p22.31"]
["11723347_a_at",397.5135,394.20746,411.15903,390.4308,402.5307,405.1182,-0.009047508,-0.02109623,0.039645195,-0.03498459,0.009047508,0.018291473,0.94350547,0.82901466,1.0039697,0.005715685,1.0039697,"up","MTERFD1",51001.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay","chr8:97251648-97273828 (-) // 88.33 // q22.1"]
["11738156_a_at",63.800835,53.04262,49.32912,61.80813,64.6163,58.80159,0.08175039,-0.18467331,-0.2893858,0.035971165,0.100072384,-0.035970688,0.6186838,0.23417369,-1.120488,-0.16412726,1.120488,"down","ZBTB26",57684.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:125680378-125693544 (-) // 95.61 // q33.2"]
["11716129_at",558.344,538.3822,566.4873,572.1901,538.3146,572.1591,-0.010444641,-0.062968254,0.010444641,0.024895668,-0.06314945,0.024817467,0.8816448,0.67505234,-1.01151,-0.016510604,1.01151,"down","IGF2R",3482.0,"0006810 // transport // inferred from electronic annotation /// 0006898 // receptor-mediated endocytosis // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0048009 // insulin-like growth factor receptor signaling pathway // traceable author statement","0005624 // membrane fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005641 // nuclear envelope lumen // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from direct assay /// 0005887 // integral to plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030139 // endocytic vesicle // inferred from direct assay /// 0030140 // trans-Golgi network transport vesicle // inferred from direct assay","0001948 // glycoprotein binding // inferred from direct assay /// 0001948 // glycoprotein binding // inferred from electronic annotation /// 0004872 // receptor activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0005010 // insulin-like growth factor-activated receptor activity // traceable author statement /// 0005215 // transporter activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005520 // insulin-like growth factor binding // inferred from electronic annotation /// 0005537 // mannose binding // inferred from electronic annotation /// 0051219 // phosphoprotein binding // inferred from direct assay","chr6:160390130-160527581 (+) // 98.1 // q25.3"]
["11756882_a_at",89.78312,87.307365,80.707344,84.62205,85.37732,75.6154,0.07900095,0.03866005,-0.07474327,-0.006409645,0.006409645,-0.16876268,0.730928,0.38717034,1.0501243,0.07056009,1.0501243,"up","RTTN",25914.0,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0007368 // determination of left/right symmetry // inferred from electronic annotation","","","chr18:67671044-67863889 (-) // 97.69 // q22.2"]
["11755637_x_at",185.82912,179.00969,183.19887,197.87665,184.47437,186.04741,0.0052776337,-0.048660755,-0.015287876,0.09590292,-0.0052776337,0.006972313,0.6039056,0.21667002,-1.0367655,-0.052089553,1.0367655,"down","ARHGEF10L",55160.0,"0032321 // positive regulation of Rho GTPase activity // inferred from direct assay /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0035104 // positive regulation of transcription via sterol regulatory element binding // inferred from direct assay /// 0051496 // positive regulation of stress fiber assembly // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay","0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005100 // Rho GTPase activator activity // inferred from direct assay","chr1:17941582-18024363 (+) // 89.68 // p36.13"]
["11718996_at",10.420299,11.430185,10.889567,10.264246,11.246919,12.811001,-0.08684158,0.046610355,-0.023291588,-0.10861039,0.023291588,0.21114492,0.830808,0.56391865,-1.0447199,-0.06311624,1.0447199,"down","MSRB2",22921.0,"0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0030091 // protein repair // inferred from sequence or structural similarity /// 0030091 // protein repair // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005739 // mitochondrion // inferred from electronic annotation","0000318 // protein-methionine-R-oxide reductase activity // inferred from sequence or structural similarity /// 0000318 // protein-methionine-R-oxide reductase activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0008113 // peptide-methionine-(S)-S-oxide reductase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from sequence or structural similarity /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr10:23384377-23411276 (+) // 57.95 // p12.2"]
["11742377_at",10.07904,9.582846,9.428175,9.2818165,10.196168,9.1869545,0.08456993,0.011737585,-0.011737585,-0.03430891,0.10123873,-0.049129725,0.8966756,0.71106637,1.0155467,0.022256555,1.0155467,"up","OR7C2",26658.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr19:15052300-15053260 (+) // 99.69 // p13.12"]
["11736548_s_at",113.52308,108.67278,110.22477,104.25752,103.66421,103.90842,0.09291506,0.029919624,0.050378323,-0.029919147,-0.03815317,-0.03475809,0.18070292,0.007936599,1.0658574,0.09201445,1.0658574,"up","FANCD2",2177.0,"0006281 // DNA repair // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007129 // synapsis // inferred from electronic annotation /// 0007276 // gamete generation // inferred from electronic annotation /// 0010332 // response to gamma radiation // inferred from direct assay","0000793 // condensed chromosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0005515 // protein binding // inferred from physical interaction","chr3:10068070-10141344 (+) // 93.96 // p25.3"]
["11747866_a_at",126.6034,127.85844,129.29427,135.81233,148.36142,137.01666,-0.065820694,-0.051589012,-0.035478115,0.035478115,0.1629796,0.048214912,0.30905756,0.032565113,-1.0967135,-0.13318674,1.0967135,"down","RBL2",5934.0,"0000080 // G1 phase of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0043550 // regulation of lipid kinase activity // inferred from direct assay /// 0051726 // regulation of cell cycle // inferred from electronic annotation","0000785 // chromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr16:53483880-53524532 (+) // 99.86 // q12.2"]
["11719799_a_at",892.7076,904.6971,986.6261,857.74316,857.2534,864.4439,0.023207664,0.04245472,0.16752338,-0.03443432,-0.035258293,-0.023207664,0.41610628,0.07485617,1.0782527,0.10869529,1.0782527,"up","MBD4",8930.0,"0006281 // DNA repair // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006284 // base-excision repair // inferred from electronic annotation /// 0006284 // base-excision repair // traceable author statement /// 0006285 // base-excision repair, AP site formation // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0008630 // DNA damage response, signal transduction resulting in induction of apoptosis // inferred from electronic annotation /// 0009314 // response to radiation // inferred from electronic annotation /// 0045008 // depyrimidination // traceable author statement","0000785 // chromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003696 // satellite DNA binding // traceable author statement /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004520 // endodeoxyribonuclease activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation","chr3:129149788-129159022 (-) // 86.25 // q21.3"]
["11742511_a_at",25.972261,28.962437,34.224445,29.146255,30.563568,32.553852,-0.20059013,-0.04337883,0.19746542,-0.034251213,0.034251213,0.12526655,0.8790938,0.6697985,-1.0404854,-0.057256695,1.0404854,"down","IL4R",3566.0,"0002532 // production of molecular mediator involved in inflammatory response // inferred from electronic annotation /// 0006955 // immune response // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // inferred from electronic annotation /// 0030728 // ovulation // inferred from electronic annotation /// 0035771 // interleukin-4-mediated signaling pathway // traceable author statement /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0043032 // positive regulation of macrophage activation // inferred from electronic annotation /// 0043627 // response to estrogen stimulus // inferred from electronic annotation /// 0045626 // negative regulation of T-helper 1 cell differentiation // inferred from electronic annotation /// 0045630 // positive regulation of T-helper 2 cell differentiation // inferred from electronic annotation /// 0090197 // positive regulation of chemokine secretion // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004896 // cytokine receptor activity // inferred from electronic annotation /// 0004913 // interleukin-4 receptor activity // traceable author statement /// 0005057 // receptor signaling protein activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0043560 // insulin receptor substrate binding // inferred from reviewed computational analysis","chr16:27325250-27364017 (+) // 70.52 // p12.1"]
["11741910_s_at",5.704106,5.230111,5.6087656,5.467607,5.324849,5.304366,0.08017564,-0.044983625,0.055858135,0.019084454,-0.019084454,-0.024644852,0.7376686,0.3970774,1.0270917,0.03856505,1.0270917,"up","PKNOX2",63876.0,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from electronic annotation","0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003785 // actin monomer binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0051015 // actin filament binding // inferred from electronic annotation","chr11:125034558-125303282 (+) // 97.22 // q24.2"]
["11759627_at",52.305973,49.33134,60.234535,55.320637,54.77905,50.708443,-0.03332424,-0.11779547,0.17029142,0.047517776,0.03332424,-0.07807398,0.9868992,0.95653,1.0037973,0.00546796,1.0037973,"up","USP15",9958.0,"0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0016579 // protein deubiquitination // inferred from direct assay","","0003824 // catalytic activity // inferred from electronic annotation /// 0004197 // cysteine-type endopeptidase activity // traceable author statement /// 0004221 // ubiquitin thiolesterase activity // inferred from electronic annotation /// 0004843 // ubiquitin-specific protease activity // inferred from direct assay /// 0004843 // ubiquitin-specific protease activity // inferred from electronic annotation /// 0004843 // ubiquitin-specific protease activity // traceable author statement /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr12:62654160-62730474 (+) // 82.6 // q14.1"]
["11718129_x_at",304.40665,306.98633,331.24866,288.47266,308.1839,290.4604,-0.006087303,0.006087303,0.11582756,-0.0836525,0.011704445,-0.07374573,0.5327158,0.15103051,1.0622871,0.087173715,1.0622871,"up","ARL2",402.0,"0006184 // GTP catabolic process // inferred from mutant phenotype /// 0007021 // tubulin complex assembly // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0010811 // positive regulation of cell-substrate adhesion // inferred from sequence or structural similarity /// 0015870 // acetylcholine transport // inferred from electronic annotation /// 0031113 // regulation of microtubule polymerization // inferred from mutant phenotype /// 0031116 // positive regulation of microtubule polymerization // inferred from direct assay /// 0034260 // negative regulation of GTPase activity // inferred from direct assay /// 0051297 // centrosome organization // inferred from mutant phenotype /// 0051457 // maintenance of protein location in nucleus // inferred from direct assay /// 0070830 // tight junction assembly // inferred from sequence or structural similarity","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005758 // mitochondrial intermembrane space // inferred from direct assay /// 0005758 // mitochondrial intermembrane space // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0016328 // lateral plasma membrane // inferred from sequence or structural similarity","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from mutant phenotype /// 0005095 // GTPase inhibitor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from mutant phenotype /// 0005525 // GTP binding // inferred from electronic annotation /// 0019003 // GDP binding // inferred from electronic annotation","chr11:64781423-64789656 (+) // 95.24 // q13.1"]
["11734958_s_at",69.831215,66.05938,73.00017,68.65344,73.3433,69.57282,0.0026745796,-0.07743454,0.06670141,-0.021866322,0.073467255,-0.0026741028,0.9036231,0.72770244,-1.0132535,-0.018995088,1.0132535,"down","C14orf135",64430.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr14:60558544-60601530 (+) // 99.38 // q23.1"]
["11759275_at",5.8271093,6.036169,4.802429,6.082699,5.8271093,5.4206185,0.0,0.050852776,-0.27901602,0.061931133,0.0,-0.10432291,0.85401314,0.61414975,-1.0438569,-0.06192389,1.0438569,"down","OR2M3",127062.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr1:248366331-248367393 (+) // 100.0 // q44"]
["11745871_a_at",570.8482,553.3195,598.5217,492.77756,518.4149,498.04083,0.09199715,0.047002792,0.16029358,-0.120173454,-0.047002792,-0.104846,0.18555166,0.008715049,1.1411105,0.19043855,1.1411105,"up","PAPOLA",10914.0,"0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006378 // mRNA polyadenylation // non-traceable author statement /// 0006397 // mRNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0031123 // RNA 3'-end processing // inferred from electronic annotation /// 0031124 // mRNA 3'-end processing // traceable author statement /// 0043631 // RNA polyadenylation // inferred from sequence or structural similarity /// 0043631 // RNA polyadenylation // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from sequence or structural similarity /// 0003723 // RNA binding // non-traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0004652 // polynucleotide adenylyltransferase activity // inferred from sequence or structural similarity /// 0004652 // polynucleotide adenylyltransferase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from sequence or structural similarity /// 0005524 // ATP binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016779 // nucleotidyltransferase activity // inferred from electronic annotation /// 0030145 // manganese ion binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation","chr14:96968770-97033420 (+) // 97.22 // q32.2"]
["11734814_a_at",140.03331,133.07921,141.94296,136.23358,143.74713,139.66843,0.0018815994,-0.0716033,0.021422863,-0.037806034,0.03964472,-0.0018820763,0.88327855,0.67890614,-1.0112118,-0.016085137,1.0112118,"down","PDE1A",5136.0,"0000042 // protein targeting to Golgi // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007202 // activation of phospholipase C activity // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement","0005829 // cytosol // traceable author statement","0003824 // catalytic activity // inferred from electronic annotation /// 0004114 // 3',5'-cyclic-nucleotide phosphodiesterase activity // inferred from electronic annotation /// 0004117 // calmodulin-dependent cyclic-nucleotide phosphodiesterase activity // traceable author statement /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0008081 // phosphoric diester hydrolase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:183006903-183387425 (-) // 97.1 // q32.1"]
["11722465_a_at",236.9795,217.37042,228.95747,220.14241,219.04059,231.37395,0.07800388,-0.046603203,0.02832079,-0.028321266,-0.03556013,0.043468,0.83629864,0.5776786,1.0186876,0.026711697,1.0186876,"up","C17orf80",55028.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr17:71228867-71245093 (+) // 98.03 // q25.1"]
["11719993_x_at",93.23714,93.0594,93.00197,90.64708,92.824684,99.32065,0.0031981468,4.453659E-4,-4.4584274E-4,-0.037446022,-0.0031981468,0.094387054,0.88799155,0.69173276,-1.0117469,-0.016848404,1.0117469,"down","NLK",51701.0,"0000165 // MAPK cascade // inferred from sequence or structural similarity /// 0000165 // MAPK cascade // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from sequence or structural similarity /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from mutant phenotype /// 0007243 // intracellular protein kinase cascade // inferred from sequence or structural similarity /// 0007243 // intracellular protein kinase cascade // inferred from electronic annotation /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018107 // peptidyl-threonine phosphorylation // inferred from sequence or structural similarity /// 0018107 // peptidyl-threonine phosphorylation // inferred from electronic annotation /// 0030178 // negative regulation of Wnt receptor signaling pathway // inferred from sequence or structural similarity /// 0030178 // negative regulation of Wnt receptor signaling pathway // inferred from electronic annotation /// 0033136 // serine phosphorylation of STAT3 protein // inferred from sequence or structural similarity /// 0033136 // serine phosphorylation of STAT3 protein // inferred from electronic annotation /// 0046777 // protein autophosphorylation // inferred from electronic annotation","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from sequence or structural similarity /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004707 // MAP kinase activity // inferred from sequence or structural similarity /// 0004707 // MAP kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from sequence or structural similarity /// 0005524 // ATP binding // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from physical interaction /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0042169 // SH2 domain binding // inferred from sequence or structural similarity /// 0042169 // SH2 domain binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:26368784-26523402 (+) // 91.63 // q11.2"]
["11733607_a_at",7.2072444,6.3470416,7.326461,6.696684,6.2961483,6.7239146,0.1030736,-0.08028984,0.12674212,-0.0029273033,-0.09190464,0.0029273033,0.69173604,0.32781446,1.0573674,0.08047681,1.0573674,"up","LRRC34",151827.0,"","","","chr3:169511268-169530312 (-) // 97.6 // q26.2"]
["11721035_x_at",18.23172,21.008635,17.902721,14.229504,24.111612,18.202326,0.0011639595,0.20569563,-0.02510786,-0.35640144,0.40444136,-0.0011639595,0.9522732,0.85553247,1.0316535,0.044958528,1.0316535,"up","PPP1R3B",79660.0,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0005977 // glycogen metabolic process // inferred from electronic annotation","","","chr8:8993764-9008220 (-) // 88.24 // p23.1"]
["11742980_a_at",5.5612955,5.8284326,5.906799,5.298321,5.221838,5.942531,-0.033843517,0.033843517,0.05311203,-0.10372925,-0.124706745,0.061813116,0.6860062,0.32030222,1.0520804,0.07324495,1.0520804,"up","ANKS1B",56899.0,"","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0015030 // Cajal body // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0046875 // ephrin receptor binding // inferred from physical interaction","chr12:99137995-99548542 (-) // 97.01 // q23.1"]
["11717748_x_at",1786.9714,1808.349,1828.969,1816.592,1853.996,1849.6333,-0.028615952,-0.011459351,0.0048980713,-0.0048980713,0.024505615,0.02110672,0.5071694,0.1323189,-1.0176893,-0.025297241,1.0176893,"down","MCTS1",28985.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0040008 // regulation of growth // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation","chrX:119737687-119755014 (+) // 74.21 // q24"]
["11742257_a_at",9.489949,10.503118,10.983149,11.904214,10.555141,9.508195,-0.14990973,-0.0035641193,0.060909748,0.17709064,0.0035643578,-0.14713836,0.90366954,0.72776544,-1.0295593,-0.042026863,1.0295593,"down","PTGER3",5733.0,"0001660 // fever generation // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007188 // adenylate cyclase-modulating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007200 // phospholipase C-activating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007204 // elevation of cytosolic calcium ion concentration // inferred from electronic annotation /// 0008219 // cell death // traceable author statement /// 0015701 // bicarbonate transport // inferred from electronic annotation /// 0030522 // intracellular receptor mediated signaling pathway // traceable author statement /// 0031622 // positive regulation of fever generation // inferred from sequence or structural similarity /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0035810 // positive regulation of urine volume // inferred from electronic annotation","0005635 // nuclear envelope // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // traceable author statement","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004879 // ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity // traceable author statement /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004955 // prostaglandin receptor activity // inferred from electronic annotation /// 0004957 // prostaglandin E receptor activity // inferred from electronic annotation /// 0004957 // prostaglandin E receptor activity // non-traceable author statement /// 0004957 // prostaglandin E receptor activity // traceable author statement","chr1:71418114-71513491 (-) // 92.12 // p31.1"]
["11752824_a_at",56.00322,56.538857,54.845715,54.679214,57.036278,57.17376,-0.006866455,0.006866932,-0.03699732,-0.04138422,0.019503117,0.022976875,0.86272275,0.6328031,-1.0088401,-0.012697504,1.0088401,"down","C17orf61-PLSCR3 /// PLSCR3","100529211 /// 57048","0017121 // phospholipid scrambling // non-traceable author statement /// 0042593 // glucose homeostasis // inferred from electronic annotation /// 0042632 // cholesterol homeostasis // inferred from electronic annotation /// 0071222 // cellular response to lipopolysaccharide // inferred from electronic annotation","0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005509 // calcium ion binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0017128 // phospholipid scramblase activity // non-traceable author statement /// 0048306 // calcium-dependent protein binding // inferred from physical interaction","chr17:7293535-7307414 (-) // 97.7 // p13.1"]
["11751321_a_at",57.499466,53.19025,50.587246,58.367123,46.319504,58.803265,0.05619335,-0.056192875,-0.12858105,0.07780123,-0.25573492,0.08854151,0.9755149,0.92189085,-1.0090955,-0.013062787,1.0090955,"down","CRIM1",51232.0,"0001558 // regulation of cell growth // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0043086 // negative regulation of catalytic activity // inferred from electronic annotation /// 0048009 // insulin-like growth factor receptor signaling pathway // traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0004857 // enzyme inhibitor activity // inferred from electronic annotation /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0005010 // insulin-like growth factor-activated receptor activity // traceable author statement /// 0005520 // insulin-like growth factor binding // inferred from electronic annotation","chr2:36744515-36776110 (+) // 88.26 // p22.2"]
["11756118_s_at",357.85504,346.33255,407.12277,362.70724,393.67545,350.87375,-0.00971508,-0.05693245,0.17637348,0.00971508,0.12791634,-0.03813839,0.99121267,0.97048336,1.0023671,0.0034110239,1.0023671,"up","MLL5",55904.0,"0002446 // neutrophil mediated immunity // inferred from sequence or structural similarity /// 0002446 // neutrophil mediated immunity // inferred from electronic annotation /// 0006306 // DNA methylation // inferred from sequence or structural similarity /// 0006306 // DNA methylation // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0030218 // erythrocyte differentiation // inferred from sequence or structural similarity /// 0030218 // erythrocyte differentiation // inferred from electronic annotation /// 0030854 // positive regulation of granulocyte differentiation // inferred from mutant phenotype /// 0032259 // methylation // inferred from electronic annotation /// 0034968 // histone lysine methylation // inferred from electronic annotation /// 0042119 // neutrophil activation // inferred from sequence or structural similarity /// 0042119 // neutrophil activation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0048384 // retinoic acid receptor signaling pathway // inferred from mutant phenotype /// 0051568 // histone H3-K4 methylation // inferred from direct assay /// 0071300 // cellular response to retinoic acid // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation /// 0070688 // MLL5-L complex // inferred from direct assay","0003713 // transcription coactivator activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0018024 // histone-lysine N-methyltransferase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0042800 // histone methyltransferase activity (H3-K4 specific) // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:104753404-104754527 (+) // 99.05 // q22.3"]
["11728751_a_at",155.75719,141.11775,162.34213,161.12126,152.37395,166.86238,-0.024424076,-0.16682339,0.03531456,0.0244236,-0.056106567,0.07493591,0.7415917,0.40307134,-1.0470971,-0.066395216,1.0470971,"down","OSBP",5007.0,"0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005543 // phospholipid binding // inferred from electronic annotation /// 0008142 // oxysterol binding // traceable author statement /// 0008289 // lipid binding // inferred from electronic annotation","chr11:59341871-59383617 (-) // 94.22 // q12.1"]
["11715402_x_at",3818.0054,3822.9932,3921.4045,3660.2576,3753.9338,3751.1184,0.012207985,0.014091492,0.050759315,-0.048666,-0.012207985,-0.013289452,0.34347886,0.043856353,1.0355573,0.050407343,1.0355573,"up","ILF2",3608.0,"0006351 // transcription, DNA-dependent // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006955 // immune response // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from direct assay","0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003725 // double-stranded RNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr1:153634263-153643471 (-) // 64.49 // q21.3"]
["11760528_at",10.676607,10.145367,11.467635,13.73275,11.230051,12.618853,-0.088012934,-0.16164517,0.015101671,0.2751541,-0.015101671,0.15311456,0.4471445,0.093547866,-1.1614345,-0.21590783,1.1614345,"down","RDM1",201299.0,"0006281 // DNA repair // inferred from electronic annotation /// 0006310 // DNA recombination // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0015030 // Cajal body // inferred from electronic annotation /// 0016605 // PML body // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation","chr17:34249158-34257770 (-) // 85.03 // q12"]
["11744420_at",41.83011,44.546837,43.83273,40.961765,42.35706,42.287064,-0.016867638,0.073913574,0.0505991,-0.04713154,0.0011930466,-0.0011930466,0.56116253,0.17610244,1.0364081,0.05159215,1.0364081,"up","MIR600 /// MIR600HG","693185 /// 81571","","","","chr9:125871772-125877756 (-) // 95.55 // q33.3"]
["11761323_at",13.4829445,16.023153,13.468173,15.859345,15.62536,12.510394,-0.10637689,0.14264584,-0.10795808,0.12782097,0.106377125,-0.21438503,0.94594383,0.836479,-1.0213666,-0.03050078,1.0213666,"down","COMMD9",29099.0,"","","","chr11:36296052-36310976 (-) // 89.17 // p13"]
["11744583_s_at",55.237686,62.125565,56.77948,61.915268,56.553604,56.51438,-0.03684187,0.13269234,0.0028748512,0.12780046,-0.002875328,-0.0038762093,0.9741136,0.9173153,-1.0051712,-0.007441212,1.0051712,"down","AMDHD2 /// CEMP1","51005 /// 752014","0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006044 // N-acetylglucosamine metabolic process // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0008448 // N-acetylglucosamine-6-phosphate deacetylase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016810 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds // inferred from electronic annotation","chr16:2570365-2579732 (+) // 99.19 // p13.3"]
["11758184_x_at",1278.7297,1259.5409,1310.9229,1381.2054,1356.3339,1363.1182,-0.06043625,-0.08224964,-0.024564743,0.050780296,0.024564743,0.031763077,0.18070155,0.007865731,-1.0654427,-0.09145298,1.0654427,"down","KRT8",3856.0,"0007010 // cytoskeleton organization // non-traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005882 // intermediate filament // non-traceable author statement /// 0005882 // intermediate filament // inferred from electronic annotation /// 0016363 // nuclear matrix // inferred from electronic annotation /// 0045095 // keratin filament // inferred from electronic annotation","0005198 // structural molecule activity // non-traceable author statement /// 0005198 // structural molecule activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr12:53293746-53298821 (-) // 86.05 // q13.13"]
["11725061_a_at",248.51886,238.62817,267.43732,217.37395,219.50102,214.75334,0.11885929,0.060267925,0.22470474,-0.07431698,-0.060268402,-0.09181547,0.2178713,0.012751613,1.1567504,0.21007764,1.1567504,"up","USP7",7874.0,"0006281 // DNA repair // inferred from electronic annotation /// 0006283 // transcription-coupled nucleotide-excision repair // inferred from mutant phenotype /// 0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0016579 // protein deubiquitination // inferred from direct assay /// 0016579 // protein deubiquitination // inferred from mutant phenotype /// 0031647 // regulation of protein stability // inferred from electronic annotation /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0016605 // PML body // inferred from electronic annotation","0002039 // p53 binding // inferred from direct assay /// 0004197 // cysteine-type endopeptidase activity // traceable author statement /// 0004221 // ubiquitin thiolesterase activity // inferred from mutant phenotype /// 0004221 // ubiquitin thiolesterase activity // inferred from electronic annotation /// 0004843 // ubiquitin-specific protease activity // inferred from direct assay /// 0004843 // ubiquitin-specific protease activity // inferred from mutant phenotype /// 0004843 // ubiquitin-specific protease activity // inferred from electronic annotation /// 0004843 // ubiquitin-specific protease activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from electronic annotation","chr16:8985953-9057341 (-) // 95.32 // p13.2"]
["11751316_x_at",46.80826,39.526127,40.013035,42.348213,48.2732,39.469875,0.1853776,-0.058578968,-0.04091549,0.04091549,0.22983694,-0.06063366,0.9088151,0.7387223,-1.0291204,-0.04141184,1.0291204,"down","EPS8L1",54869.0,"0016310 // phosphorylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation","chr19:55591759-55599057 (+) // 97.73 // q13.42"]
["11719866_at",74.056725,71.64076,57.339024,68.91206,64.86223,71.29299,0.079372406,0.031522274,-0.28974056,-0.024501324,-0.111879826,0.0245018,0.955656,0.8643371,-1.0155929,-0.02232226,1.0155929,"down","SVEP1",79987.0,"0007155 // cell adhesion // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr9:113127527-113342160 (-) // 98.99 // q31.3"]
["11747376_s_at",284.81946,297.23962,333.39447,331.14227,344.16125,315.70743,-0.18297195,-0.121393204,0.044210434,0.034431458,0.090065,-0.034431458,0.58995557,0.20312531,-1.0842819,-0.116739914,1.0842819,"down","CCPG1",9236.0,"0007049 // cell cycle // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 2001106 // regulation of Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr15:55651043-55665781 (-) // 91.73 // q21.3"]
["11740760_at",17.134748,17.064306,16.487488,16.904833,16.803404,15.3181,0.023830414,0.017887115,-0.031723022,0.0043411255,-0.0043411255,-0.1378572,0.72230285,0.37382585,1.0347512,0.04928389,1.0347512,"up","TRPA1",8989.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006811 // ion transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0009409 // response to cold // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042542 // response to hydrogen peroxide // inferred from electronic annotation /// 0048265 // response to pain // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050955 // thermoception // inferred from electronic annotation /// 0050966 // detection of mechanical stimulus involved in sensory perception of pain // inferred from electronic annotation /// 0050968 // detection of chemical stimulus involved in sensory perception of pain // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0070588 // calcium ion transmembrane transport // inferred from electronic annotation","0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0032421 // stereocilium bundle // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005262 // calcium channel activity // inferred from electronic annotation /// 0015267 // channel activity // traceable author statement /// 0015267 // channel activity // inferred from electronic annotation","chr8:72933485-72987852 (-) // 95.44 // q13.3"]
["11719788_s_at",1670.6115,1663.1628,1742.9735,1590.8951,1692.5394,1591.6577,0.0032234192,-0.0032234192,0.06439781,-0.06731415,0.022036552,-0.066622734,0.57006717,0.18426709,1.0415745,0.058766004,1.0415745,"up","TUBB2A",7280.0,"0006184 // GTP catabolic process // inferred from electronic annotation /// 0006457 // protein folding // traceable author statement /// 0007017 // microtubule-based process // inferred from electronic annotation /// 0007018 // microtubule-based movement // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement /// 0051258 // protein polymerization // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0005874 // microtubule // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005198 // structural molecule activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0042277 // peptide binding // inferred from electronic annotation","chr6:3153911-3157809 (-) // 96.98 // p25.2"]
["11751189_x_at",18.629385,18.089703,21.457945,17.44776,17.404884,16.367235,0.06847477,0.026063442,0.27240658,-0.026063442,-0.029613018,-0.118294716,0.44541928,0.092230126,1.1331236,0.18030529,1.1331236,"up","RIMS1",22999.0,"0006461 // protein complex assembly // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006836 // neurotransmitter transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006887 // exocytosis // inferred from electronic annotation /// 0006944 // cellular membrane fusion // non-traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007269 // neurotransmitter secretion // traceable author statement /// 0007601 // visual perception // inferred from electronic annotation /// 0014047 // glutamate secretion // traceable author statement /// 0016079 // synaptic vesicle exocytosis // traceable author statement /// 0017156 // calcium ion-dependent exocytosis // traceable author statement /// 0045055 // regulated secretory pathway // non-traceable author statement /// 0046903 // secretion // non-traceable author statement /// 0048169 // regulation of long-term neuronal synaptic plasticity // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0042734 // presynaptic membrane // inferred from sequence or structural similarity /// 0042734 // presynaptic membrane // non-traceable author statement /// 0042734 // presynaptic membrane // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0005083 // small GTPase regulator activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0017137 // Rab GTPase binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:72970401-73110962 (+) // 92.33 // q13"]
["11748164_a_at",5.553597,4.751352,5.0291643,5.937415,5.662181,5.371006,0.024115086,-0.20096946,-0.11898875,0.120527506,0.052050352,-0.024115086,0.5044873,0.13011774,-1.1081107,-0.14810197,1.1081107,"down","VCAN",1462.0,"0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007275 // multicellular organismal development // traceable author statement /// 0007507 // heart development // inferred from electronic annotation /// 0008037 // cell recognition // traceable author statement /// 0008347 // glial cell migration // inferred from direct assay /// 0009611 // response to wounding // inferred from electronic annotation /// 0031103 // axon regeneration // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from sequence or structural similarity","0005509 // calcium ion binding // inferred from electronic annotation /// 0005539 // glycosaminoglycan binding // traceable author statement /// 0005540 // hyaluronic acid binding // inferred from electronic annotation /// 0005540 // hyaluronic acid binding // traceable author statement /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr5:82767582-82876981 (+) // 99.9 // q14.2"]
["11721203_at",10.348099,11.090285,10.327864,10.292716,11.366433,11.87632,-0.04996538,0.04996538,-0.052788973,-0.05770755,0.0854485,0.14875674,0.69691825,0.33500078,-1.0544049,-0.07642892,1.0544049,"down","SCARF2",91179.0,"0007155 // cell adhesion // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr22:20778873-20792146 (-) // 91.56 // q11.21"]
["11735804_x_at",111.55202,113.68698,112.413216,110.83943,113.14512,109.047485,-0.0055475235,0.021802902,0.0055470467,-0.014792919,0.014909744,-0.038307667,0.6803275,0.31265175,1.0139579,0.019997692,1.0139579,"up","NAT6",24142.0,"","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay","0008080 // N-acetyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation","chr3:50333833-50336847 (-) // 98.23 // p21.31"]
["11719412_at",97.11438,105.352516,104.3556,106.99919,117.71872,99.900055,-0.11060953,0.006858349,-0.006858349,0.029232979,0.1669774,-0.06980896,0.71927965,0.36858803,-1.0562882,-0.07900357,1.0562882,"down","PBX1",5087.0,"0001655 // urogenital system development // inferred from electronic annotation /// 0001658 // branching involved in ureteric bud morphogenesis // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006694 // steroid biosynthetic process // inferred from electronic annotation /// 0007548 // sex differentiation // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0009954 // proximal/distal pattern formation // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030278 // regulation of ossification // inferred from electronic annotation /// 0030325 // adrenal gland development // inferred from electronic annotation /// 0030326 // embryonic limb morphogenesis // inferred from electronic annotation /// 0035162 // embryonic hemopoiesis // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048536 // spleen development // inferred from electronic annotation /// 0048538 // thymus development // inferred from electronic annotation /// 0048568 // embryonic organ development // inferred from electronic annotation /// 0048706 // embryonic skeletal system development // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr1:164528434-164821067 (+) // 94.97 // q23.3"]
["11726441_a_at",199.94241,201.37395,210.8562,192.0406,190.54463,185.46526,0.02908659,0.039378643,0.10576153,-0.029087067,-0.040369034,-0.07934904,0.25454938,0.01934565,1.0774921,0.10767731,1.0774921,"up","ERCC6L",54821.0,"0000087 // M phase of mitotic cell cycle // traceable author statement /// 0000236 // mitotic prometaphase // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chrX:71424514-71458897 (-) // 98.01 // q13.1"]
["11761498_at",18.975828,20.209446,15.800628,20.06864,24.111612,18.817667,-0.040390015,0.050477028,-0.30457115,0.040390015,0.3051753,-0.052464962,0.64241743,0.26451787,-1.1454079,-0.19586147,1.1454079,"down","FAM129C",199786.0,"","","0005543 // phospholipid binding // inferred from electronic annotation","chr19:17634109-17660620 (+) // 99.07 // p13.11"]
["11761732_at",19.122387,18.185963,17.412088,18.569963,20.940218,23.32698,0.02114582,-0.051291466,-0.1140275,-0.02114582,0.15215969,0.3078828,0.50567573,0.13148727,-1.1442138,-0.19435664,1.1442138,"down","PILRA",29992.0,"0007165 // signal transduction // inferred from direct assay /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr7:99971150-99972732 (+) // 99.92 // q22.1"]
["11762481_at",58.482967,61.20135,63.190407,61.826107,62.07928,65.49788,-0.083147526,-0.017600536,0.028541565,-0.0029478073,0.0029478073,0.08028412,0.66598827,0.29340655,-1.0358609,-0.05083028,1.0358609,"down","LAMB4",22798.0,"0007155 // cell adhesion // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005604 // basement membrane // inferred from electronic annotation","","chr7:107715982-107763640 (-) // 86.92 // q31.1"]
["11722116_a_at",11.679372,11.349435,10.477064,12.124898,13.624278,11.664451,9.2220306E-4,-0.040420055,-0.15580583,0.05493188,0.22313929,-9.2220306E-4,0.5008768,0.12739195,-1.1153405,-0.15748417,1.1153405,"down","RARB",5915.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001657 // ureteric bud development // inferred from electronic annotation /// 0003417 // growth plate cartilage development // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0021756 // striatum development // inferred from electronic annotation /// 0022008 // neurogenesis // inferred from electronic annotation /// 0032331 // negative regulation of chondrocyte differentiation // inferred from electronic annotation /// 0035116 // embryonic hindlimb morphogenesis // inferred from electronic annotation /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043068 // positive regulation of programmed cell death // inferred from electronic annotation /// 0043401 // steroid hormone mediated signaling pathway // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048048 // embryonic eye morphogenesis // inferred from electronic annotation /// 0048384 // retinoic acid receptor signaling pathway // traceable author statement /// 0048384 // retinoic acid receptor signaling pathway // inferred from electronic annotation /// 0048384 // retinoic acid receptor signaling pathway // inferred from direct assay /// 0048566 // embryonic digestive tract development // inferred from mutant phenotype /// 0055012 // ventricular cardiac muscle cell differentiation // inferred from electronic annotation /// 0061037 // negative regulation of cartilage development // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003707 // steroid hormone receptor activity // inferred from electronic annotation /// 0003708 // retinoic acid receptor activity // inferred from electronic annotation /// 0003708 // retinoic acid receptor activity // traceable author statement /// 0003708 // retinoic acid receptor activity // inferred from direct assay /// 0004872 // receptor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:25469009-25639423 (+) // 95.75 // p24.2"]
["11737598_a_at",73.03039,75.32162,78.44464,76.092,80.04067,66.612595,-0.05190754,-0.0073399544,0.05127096,0.007340431,0.08032894,-0.18460941,0.91028816,0.7432483,1.0207677,0.029654568,1.0207677,"up","C17orf67",339210.0,"","0005576 // extracellular region // inferred from electronic annotation","","chr17:54869274-54911256 (-) // 82.48 // q22"]
["11728523_a_at",8.345828,8.229144,8.424893,7.9056206,8.539962,7.7738853,0.010156393,-0.010156393,0.023759604,-0.068020105,0.043330908,-0.09226298,0.6972143,0.335631,1.0330456,0.046904005,1.0330456,"up","MYCL1",4610.0,"0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation","chr1:40361099-40367687 (-) // 97.97 // p34.2"]
["11728439_at",34.387417,37.44801,37.985188,33.1536,31.754543,29.987307,0.02635765,0.1493659,0.16991377,-0.02635765,-0.088560104,-0.17117119,0.28628615,0.02652589,1.1571497,0.21057548,1.1571497,"up","BRWD1",54014.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0007010 // cytoskeleton organization // inferred from mutant phenotype /// 0008360 // regulation of cell shape // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","","chr21:40557818-40685556 (-) // 98.43 // q22.2"]
["11750366_a_at",6.9685545,6.095609,6.660283,5.847262,6.0149508,6.0149508,0.20269775,0.009608746,0.13742185,-0.050400496,-0.009608746,-0.009608746,0.41562217,0.07459238,1.1017387,0.13978209,1.1017387,"up","EPHA6",285220.0,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0048013 // ephrin receptor signaling pathway // inferred from electronic annotation","0005887 // integral to plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005003 // ephrin receptor activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr3:97158434-97356907 (+) // 95.38 // q11.2"]
["11760384_at",45.494743,41.334038,50.27468,47.230312,46.61253,41.72725,-0.017508984,-0.15587854,0.12662315,0.03650427,0.017508984,-0.14221907,0.9660293,0.8961004,1.009621,0.013813858,1.009621,"up","PPP2R5C",5527.0,"0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // inferred from direct assay /// 0007165 // signal transduction // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0016485 // protein processing // inferred from direct assay /// 0042771 // DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis // inferred from mutant phenotype /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from mutant phenotype","0000159 // protein phosphatase type 2A complex // inferred from direct assay /// 0000159 // protein phosphatase type 2A complex // inferred from electronic annotation /// 0000159 // protein phosphatase type 2A complex // non-traceable author statement /// 0000775 // chromosome, centromeric region // inferred from direct assay /// 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from direct assay /// 0008601 // protein phosphatase type 2A regulator activity // inferred from direct assay /// 0008601 // protein phosphatase type 2A regulator activity // inferred from electronic annotation /// 0008601 // protein phosphatase type 2A regulator activity // non-traceable author statement","chr14:102276167-102349570 (+) // 99.53 // q32.31"]
["11737444_a_at",16.80553,12.749213,13.5554695,17.286652,15.221037,13.911686,0.20775414,-0.19077373,-0.10230708,0.2484765,0.06488466,-0.06488466,0.7995342,0.50262725,-1.080177,-0.11126766,1.080177,"down","GPR156",165829.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004965 // G-protein coupled GABA receptor activity // inferred from electronic annotation","chr3:119885676-120004242 (-) // 97.27 // q13.33"]
["11723152_a_at",177.47691,172.81201,156.05952,176.10579,165.08841,169.85437,0.050879955,0.012452126,-0.134655,0.03969097,-0.053512573,-0.012452602,0.941189,0.82233375,-1.0104628,-0.015016154,1.0104628,"down","GON4L",54856.0,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation","chr1:155719507-155823598 (-) // 96.24 // q22"]
["11750968_x_at",281.84378,279.98758,268.9709,260.20248,263.691,268.19006,0.069542885,0.060009956,0.0020971298,-0.045718193,-0.026504517,-0.0020971298,0.3581841,0.04906294,1.0487397,0.0686566,1.0487397,"up","NFIC",4782.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from genetic interaction /// 0006260 // DNA replication // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement","chr19:3381708-3463140 (+) // 92.67 // p13.3"]
["11741727_a_at",363.86884,334.15677,329.82474,357.57532,386.91193,366.72037,0.01258564,-0.11030769,-0.12913322,-0.01258564,0.10117245,0.02384758,0.47911364,0.1120242,-1.0815471,-0.11309655,1.0815471,"down","NEDD1",121441.0,"0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0000242 // pericentriolar material // inferred from electronic annotation /// 0000922 // spindle pole // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005813 // centrosome // inferred from electronic annotation /// 0005814 // centriole // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005932 // microtubule basal body // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from electronic annotation","","chr12:97301243-97347461 (+) // 97.93 // q23.1"]
["11754840_s_at",8.819888,7.8870096,6.9219613,7.6691027,7.170546,7.540419,0.21390891,0.052627087,-0.13567042,0.012206316,-0.084768295,-0.012206554,0.8146955,0.53170943,1.051084,0.07187802,1.051084,"up","LINC00470",56651.0,"","","","chr18:1268311-1276078 (-) // 58.43 // p11.32"]
["11757267_x_at",279.26117,277.66635,297.42596,259.0776,279.3618,279.26117,0.0,-0.008262634,0.09091568,-0.10823059,5.197525E-4,0.0,0.63714325,0.2578609,1.044965,0.06345466,1.044965,"up","SIRT2",22933.0,"0000183 // chromatin silencing at rDNA // non-traceable author statement /// 0006342 // chromatin silencing // non-traceable author statement /// 0006348 // chromatin silencing at telomere // non-traceable author statement /// 0006471 // protein ADP-ribosylation // non-traceable author statement /// 0006471 // protein ADP-ribosylation // traceable author statement /// 0006476 // protein deacetylation // inferred from direct assay /// 0006476 // protein deacetylation // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0007096 // regulation of exit from mitosis // non-traceable author statement /// 0016458 // gene silencing // non-traceable author statement /// 0016575 // histone deacetylation // traceable author statement /// 0042325 // regulation of phosphorylation // non-traceable author statement /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from mutant phenotype /// 0045843 // negative regulation of striated muscle tissue development // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0051301 // cell division // inferred from electronic annotation /// 0051775 // response to redox state // non-traceable author statement","0005677 // chromatin silencing complex // non-traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0005874 // microtubule // inferred from electronic annotation","0003950 // NAD+ ADP-ribosyltransferase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016811 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides // inferred from electronic annotation /// 0017136 // NAD-dependent histone deacetylase activity // inferred from direct assay /// 0033558 // protein deacetylase activity // inferred from direct assay /// 0035035 // histone acetyltransferase binding // inferred from physical interaction /// 0042826 // histone deacetylase binding // inferred from physical interaction /// 0042903 // tubulin deacetylase activity // inferred from direct assay /// 0043130 // ubiquitin binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051287 // NAD binding // inferred from electronic annotation /// 0070403 // NAD+ binding // inferred from direct assay /// 0070403 // NAD+ binding // inferred from electronic annotation","chr19:39369199-39369442 (-) // 35.79 // q13.2"]
["11730333_at",10.005964,10.578322,10.219613,10.876309,11.802557,10.8706455,-0.099913836,-0.019663334,-0.06943369,0.02041483,0.13832545,0.019663572,0.37466764,0.05572039,-1.0885983,-0.12247162,1.0885983,"down","DPYSL4",10570.0,"0006208 // pyrimidine base catabolic process // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0007411 // axon guidance // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0016787 // hydrolase activity // inferred from electronic annotation /// 0016810 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds // inferred from electronic annotation /// 0016812 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides // inferred from electronic annotation","chr10:134000403-134019280 (+) // 97.43 // q26.3"]
["11730717_x_at",8.39947,8.767459,10.428875,10.428875,8.770273,9.339644,-0.10769653,-0.04583597,0.20451713,0.20451713,-0.045372963,0.045372963,0.88803524,0.69214296,-1.0361103,-0.05117757,1.0361103,"down","PAGE5",90737.0,"","","","chrX:55246788-55250533 (+) // 87.59 // p11.21"]
["11718361_at",101.342834,89.55228,86.5309,101.44632,93.358665,89.64847,0.1476407,-0.030801296,-0.08031607,0.14911318,0.029252052,-0.029252052,0.8870887,0.6880208,-1.026355,-0.037529863,1.026355,"down","COIL",8161.0,"","0001674 // female germ cell nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0015030 // Cajal body // inferred from direct assay /// 0015030 // Cajal body // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0015036 // disulfide oxidoreductase activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction","chr17:55015559-55038404 (-) // 97.19 // q22"]
["11735219_at",5.6704326,5.942108,5.6718073,5.475559,6.247358,5.85766,-0.02360773,0.043908358,-0.02325797,-0.0740602,0.116179705,0.02325797,0.9006118,0.72058064,-1.015914,-0.022778226,1.015914,"down","COL10A1",1300.0,"0001501 // skeletal system development // traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005581 // collagen // inferred from electronic annotation /// 0005581 // collagen // traceable author statement /// 0005938 // cell cortex // inferred from electronic annotation","0046872 // metal ion binding // inferred from electronic annotation","chr6:116440084-116447296 (-) // 97.71 // q22.1"]
["11718052_a_at",139.87442,132.10823,143.06342,152.78535,141.81808,147.73288,-0.02621603,-0.108627796,0.0063061714,0.10115814,-0.0063066483,0.052642822,0.48713052,0.11729791,-1.0658547,-0.09201074,1.0658547,"down","TBC1D23",55773.0,"0032313 // regulation of Rab GTPase activity // inferred from electronic annotation /// 0032851 // positive regulation of Rab GTPase activity // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0005097 // Rab GTPase activator activity // inferred from electronic annotation","chr3:99979660-100044095 (+) // 96.18 // q12.1"]
["11749907_a_at",6.3843536,6.5292478,6.608941,6.199583,7.007398,6.305009,-0.016188145,0.016188145,0.033690453,-0.05855751,0.118149996,-0.034230232,0.98894,0.96361417,1.0019261,0.0027760512,1.0019261,"up","TRIM63",84676.0,"0007165 // signal transduction // non-traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005874 // microtubule // non-traceable author statement","0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0004871 // signal transducer activity // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0031432 // titin binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:26378141-26394121 (-) // 100.0 // p36.11"]
["11739616_x_at",183.84238,180.4371,184.54071,165.76831,158.85307,174.60716,0.050665855,0.023691654,0.056135178,-0.09863615,-0.16011095,-0.023691654,0.29043186,0.027735436,1.100107,0.13764378,1.100107,"up","CD3EAP",10849.0,"0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // traceable author statement /// 0009303 // rRNA transcription // inferred from electronic annotation /// 0009303 // rRNA transcription // traceable author statement","0000120 // RNA polymerase I transcription factor complex // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005730 // nucleolus // traceable author statement /// 0005736 // DNA-directed RNA polymerase I complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay","0003899 // DNA-directed RNA polymerase activity // inferred from electronic annotation","chr19:45909386-45955388 (+) // 71.15 // q13.32"]
["11737631_a_at",6.1943374,5.992724,6.416711,6.1422987,6.7924757,5.924765,0.006085634,-0.04165244,0.056969643,-0.006085634,0.13907313,-0.058106422,0.93278366,0.7990082,-1.0124327,-0.017826002,1.0124327,"down","SLC26A7",115111.0,"0001696 // gastric acid secretion // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006811 // ion transport // inferred from electronic annotation /// 0006820 // anion transport // inferred from electronic annotation /// 0006821 // chloride transport // inferred from direct assay /// 0006821 // chloride transport // inferred from electronic annotation /// 0008272 // sulfate transport // inferred from direct assay /// 0008272 // sulfate transport // inferred from electronic annotation /// 0015701 // bicarbonate transport // inferred from sequence or structural similarity /// 0015701 // bicarbonate transport // inferred from electronic annotation /// 0019532 // oxalate transport // inferred from direct assay /// 0055085 // transmembrane transport // traceable author statement","0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from mutant phenotype /// 0016323 // basolateral plasma membrane // inferred from sequence or structural similarity /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0055038 // recycling endosome membrane // inferred from electronic annotation","0005253 // anion channel activity // inferred from electronic annotation /// 0005254 // chloride channel activity // inferred from direct assay /// 0005254 // chloride channel activity // inferred from electronic annotation /// 0015106 // bicarbonate transmembrane transporter activity // inferred from sequence or structural similarity /// 0015106 // bicarbonate transmembrane transporter activity // inferred from electronic annotation /// 0015116 // sulfate transmembrane transporter activity // inferred from direct assay /// 0015116 // sulfate transmembrane transporter activity // inferred from electronic annotation /// 0015301 // anion:anion antiporter activity // inferred from electronic annotation /// 0019531 // oxalate transmembrane transporter activity // inferred from direct assay","chr8:92261515-92406946 (+) // 99.4 // q21.3"]
["11723861_a_at",13.2595005,13.748079,15.736107,12.078009,13.93138,13.589404,-0.04382968,0.008373976,0.20322251,-0.17847347,0.027482033,-0.008373976,0.69315565,0.330026,1.0785134,0.109044075,1.0785134,"up","ATP8A1",10396.0,"0006812 // cation transport // inferred from electronic annotation /// 0015914 // phospholipid transport // inferred from electronic annotation /// 0015917 // aminophospholipid transport // non-traceable author statement /// 0034220 // ion transmembrane transport // traceable author statement /// 0045332 // phospholipid translocation // non-traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0042584 // chromaffin granule membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0004012 // phospholipid-translocating ATPase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // non-traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0015247 // aminophospholipid transporter activity // non-traceable author statement /// 0015662 // ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016820 // hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances // inferred from electronic annotation /// 0019829 // cation-transporting ATPase activity // non-traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation","chr4:42410393-42659122 (-) // 99.5 // p13"]
["11733619_a_at",10.214992,8.994705,10.961111,10.491593,9.255798,9.528716,0.050167322,-0.13337255,0.15187335,0.08871317,-0.09209132,-0.050167084,0.8935553,0.70392174,1.0286397,0.040737703,1.0286397,"up","ACVR1C",130399.0,"0002021 // response to dietary excess // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred by curator /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007178 // transmembrane receptor protein serine/threonine kinase signaling pathway // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0009749 // response to glucose stimulus // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0019915 // lipid storage // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from direct assay /// 0032868 // response to insulin stimulus // inferred from electronic annotation /// 0038092 // nodal signaling pathway // inferred from mutant phenotype /// 0042981 // regulation of apoptotic process // inferred from direct assay /// 0043280 // positive regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from mutant phenotype /// 0046676 // negative regulation of insulin secretion // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0048179 // activin receptor complex // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004675 // transmembrane receptor protein serine/threonine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005024 // transforming growth factor beta-activated receptor activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016361 // activin receptor activity, type I // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred by curator /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:158383279-158485517 (-) // 93.9 // q24.1"]
["11716864_s_at",403.38736,419.31155,385.87366,380.83212,377.91782,400.83823,0.03659153,0.092448235,-0.027445793,-0.046419144,-0.057501793,0.027445793,0.62878495,0.24602747,1.0420008,0.059356343,1.0420008,"up","NISCH",11188.0,"0006006 // glucose metabolic process // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007154 // cell communication // inferred from electronic annotation /// 0008217 // regulation of blood pressure // inferred from electronic annotation /// 0016601 // Rac protein signal transduction // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // inferred from electronic annotation /// 0032228 // regulation of synaptic transmission, GABAergic // inferred from electronic annotation /// 0048243 // norepinephrine secretion // inferred from electronic annotation","0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0055037 // recycling endosome // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005178 // integrin binding // inferred from electronic annotation /// 0008227 // G-protein coupled amine receptor activity // inferred from electronic annotation /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation","chr3:52489518-52527084 (+) // 90.72 // p21.1"]
["200062_PM_s_at",6500.0796,6433.041,6762.545,6593.796,6679.156,6539.5186,-0.0146894455,-0.029646873,0.042419434,0.005962372,0.024518013,-0.005962372,0.9040966,0.7286956,-1.0061264,-0.008811568,1.0061264,"down","RPL30",6156.0,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0007059 // chromosome segregation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral infectious cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0003735 // structural constituent of ribosome // traceable author statement /// 0003735 // structural constituent of ribosome // inferred from electronic annotation","chr8:99053953-99057752 (-) // 98.74 // q22.2"]
["11740326_x_at",9.790641,10.449584,10.204364,9.86351,10.114945,10.766007,-0.053361893,0.040608406,0.0063490868,-0.042663813,-0.0063488483,0.0836463,0.92732453,0.78331184,-1.0095268,-0.01367928,1.0095268,"down","SORBS2",8470.0,"","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement /// 0030018 // Z disc // non-traceable author statement /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005200 // structural constituent of cytoskeleton // traceable author statement /// 0008093 // cytoskeletal adaptor activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008307 // structural constituent of muscle // traceable author statement","chr4:186506597-186697679 (-) // 93.63 // q35.1"]
["11725830_a_at",107.385574,114.04266,113.804276,102.80457,98.01429,107.520676,-9.069443E-4,0.08586645,0.08284712,-0.063803196,-0.1326437,9.074211E-4,0.3958099,0.0648024,1.0875753,0.12111531,1.0875753,"up","PLCL2",23228.0,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0004435 // phosphatidylinositol phospholipase C activity // inferred from electronic annotation /// 0004629 // phospholipase C activity // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0008081 // phosphoric diester hydrolase activity // inferred from electronic annotation","chr3:16926451-17132090 (+) // 97.8 // p24.3"]
["11726721_x_at",449.14694,455.27487,437.03574,431.2388,435.81137,457.11682,0.01971817,0.039268494,-0.01971817,-0.03898239,-0.023765564,0.045093536,0.8354169,0.5752662,1.0132389,0.01897438,1.0132389,"up","MPG",4350.0,"0006281 // DNA repair // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006284 // base-excision repair // inferred from electronic annotation /// 0006284 // base-excision repair // traceable author statement /// 0006285 // base-excision repair, AP site formation // traceable author statement /// 0006307 // DNA dealkylation involved in DNA repair // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0045007 // depurination // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0003677 // DNA binding // inferred from electronic annotation /// 0003684 // damaged DNA binding // traceable author statement /// 0003824 // catalytic activity // inferred from electronic annotation /// 0003905 // alkylbase DNA N-glycosylase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008725 // DNA-3-methyladenine glycosylase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0043916 // DNA-7-methylguanine glycosylase activity // inferred from electronic annotation /// 0052821 // DNA-7-methyladenine glycosylase activity // inferred from electronic annotation /// 0052822 // DNA-3-methylguanine glycosylase activity // inferred from electronic annotation","chr16:128168-135837 (+) // 86.65 // p13.3"]
["11743357_a_at",287.55005,272.3567,288.2868,279.43436,283.32623,274.56186,0.031326294,-0.04698944,0.035017967,-0.009977341,0.009977341,-0.035355568,0.83484083,0.57345706,1.0127211,0.01823686,1.0127211,"up","ZBTB40",9923.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from direct assay /// 0030282 // bone mineralization // non-traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:22778343-22857647 (+) // 92.76 // p36.12"]
["11758895_at",13.264,12.468332,13.058926,11.690099,12.296037,14.360385,0.05586362,-0.033383846,0.033383846,-0.12636542,-0.05345869,0.1704421,0.9427819,0.82700604,1.0151892,0.021748584,1.0151892,"up","EIF2S2",8894.0,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0002176 // male germ cell proliferation // inferred from electronic annotation /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred from direct assay /// 0006413 // translational initiation // traceable author statement /// 0006413 // translational initiation // inferred from electronic annotation /// 0008584 // male gonad development // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005829 // cytosol // traceable author statement /// 0005850 // eukaryotic translation initiation factor 2 complex // traceable author statement","0003723 // RNA binding // traceable author statement /// 0003743 // translation initiation factor activity // inferred from direct assay /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008135 // translation factor activity, nucleic acid binding // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation","chr20:32676110-32700084 (-) // 79.39 // q11.22"]
["11753852_a_at",6.3159432,7.334882,7.9617057,7.7700896,8.506537,6.911942,-0.25735426,-0.04157877,0.076725245,0.04157877,0.17221951,-0.1272614,0.7859479,0.47503746,-1.0739411,-0.102914885,1.0739411,"down","NNAT",4826.0,"0006810 // transport // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0007420 // brain development // traceable author statement /// 0009249 // protein lipoylation // traceable author statement /// 0009749 // response to glucose stimulus // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0032024 // positive regulation of insulin secretion // inferred from electronic annotation /// 0032880 // regulation of protein localization // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","","chr20:36149733-36151159 (+) // 98.78 // q11.23"]
["11730804_s_at",412.8255,401.90564,422.4892,419.456,430.97977,415.93173,-0.016901016,-0.055576324,0.0164814,0.0060863495,0.045186996,-0.0060863495,0.6415995,0.26332673,-1.0236536,-0.033727635,1.0236536,"down","PRPF38B",55119.0,"0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005681 // spliceosomal complex // inferred from electronic annotation","","chr1:109234913-109244745 (+) // 90.54 // p13.3"]
["11736428_at",52.137135,54.802048,51.5339,48.616253,49.52832,58.189777,0.008394718,0.080313206,-0.008394718,-0.0924778,-0.06566286,0.16684914,0.9319883,0.7967606,1.0166818,0.023868203,1.0166818,"up","STYX",6815.0,"0006470 // protein dephosphorylation // not recorded /// 0007283 // spermatogenesis // not recorded /// 0016311 // dephosphorylation // inferred from electronic annotation","0005737 // cytoplasm // not recorded","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0008138 // protein tyrosine/serine/threonine phosphatase activity // not recorded /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation","chr14:53196877-53241703 (+) // 92.63 // q22.1"]
["11734349_a_at",289.3573,305.17023,317.9629,257.44876,274.51196,266.7073,0.037991524,0.11475372,0.17399788,-0.13057518,-0.037991524,-0.079603195,0.23672597,0.015797196,1.1420593,0.19163759,1.1420593,"up","TRIM11",81559.0,"0009615 // response to virus // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0050768 // negative regulation of neurogenesis // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:228581378-228594541 (-) // 97.53 // q42.13"]
["11744180_a_at",320.05942,316.52994,319.41965,319.32843,307.37396,323.65738,0.0030927658,-0.012905121,2.0599365E-4,-2.0599365E-4,-0.055252075,0.019220352,0.8996349,0.717322,1.0061721,0.008877035,1.0061721,"up","TCIRG1",10312.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // traceable author statement /// 0006968 // cellular defense response // traceable author statement /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0015991 // ATP hydrolysis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport // traceable author statement /// 0015992 // proton transport // inferred from electronic annotation /// 0033572 // transferrin transport // traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0000220 // vacuolar proton-transporting V-type ATPase, V0 domain // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0010008 // endosome membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from direct assay /// 0033177 // proton-transporting two-sector ATPase complex, proton-transporting domain // inferred from electronic annotation","0005215 // transporter activity // traceable author statement /// 0015078 // hydrogen ion transmembrane transporter activity // inferred from electronic annotation","chr11:67806461-67818366 (+) // 95.4 // q13.2"]
["11753358_a_at",29.410446,28.293451,31.408497,33.574013,35.932343,30.39047,-0.07105827,-0.1269188,0.023767948,0.119957924,0.21789598,-0.023767948,0.4930548,0.12082532,-1.1194305,-0.16276501,1.1194305,"down","ACVR1",90.0,"0000082 // G1/S transition of mitotic cell cycle // inferred from mutant phenotype /// 0001569 // patterning of blood vessels // inferred from electronic annotation /// 0001655 // urogenital system development // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001702 // gastrulation with mouth forming second // inferred from electronic annotation /// 0001707 // mesoderm formation // inferred from electronic annotation /// 0001755 // neural crest cell migration // inferred from electronic annotation /// 0002526 // acute inflammatory response // inferred from electronic annotation /// 0003143 // embryonic heart tube morphogenesis // inferred from mutant phenotype /// 0003183 // mitral valve morphogenesis // inferred from mutant phenotype /// 0003197 // endocardial cushion development // inferred from mutant phenotype /// 0003289 // atrial septum primum morphogenesis // inferred from mutant phenotype /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007178 // transmembrane receptor protein serine/threonine kinase signaling pathway // inferred from reviewed computational analysis /// 0007178 // transmembrane receptor protein serine/threonine kinase signaling pathway // inferred from electronic annotation /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from direct assay /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0007281 // germ cell development // inferred from electronic annotation /// 0007368 // determination of left/right symmetry // inferred from electronic annotation /// 0007369 // gastrulation // inferred from electronic annotation /// 0007498 // mesoderm development // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0009968 // negative regulation of signal transduction // inferred from mutant phenotype /// 0010862 // positive regulation of pathway-restricted SMAD protein phosphorylation // inferred from direct assay /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018107 // peptidyl-threonine phosphorylation // inferred from direct assay /// 0023014 // signal transduction by phosphorylation // inferred from electronic annotation /// 0030278 // regulation of ossification // inferred from mutant phenotype /// 0030501 // positive regulation of bone mineralization // inferred from mutant phenotype /// 0030509 // BMP signaling pathway // inferred from direct assay /// 0032924 // activin receptor signaling pathway // inferred from direct assay /// 0032926 // negative regulation of activin receptor signaling pathway // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0045669 // positive regulation of osteoblast differentiation // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0048641 // regulation of skeletal muscle tissue development // inferred from electronic annotation /// 0051145 // smooth muscle cell differentiation // inferred from electronic annotation /// 0060037 // pharyngeal system development // inferred from electronic annotation /// 0060389 // pathway-restricted SMAD protein phosphorylation // inferred from direct assay /// 0060923 // cardiac muscle cell fate commitment // inferred from mutant phenotype /// 0071385 // cellular response to glucocorticoid stimulus // inferred from electronic annotation /// 2000017 // positive regulation of determination of dorsal identity // inferred from direct assay","0005887 // integral to plasma membrane // inferred from direct assay /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from electronic annotation /// 0048179 // activin receptor complex // inferred from direct assay /// 0048179 // activin receptor complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004675 // transmembrane receptor protein serine/threonine kinase activity // inferred from reviewed computational analysis /// 0004675 // transmembrane receptor protein serine/threonine kinase activity // inferred from electronic annotation /// 0004702 // receptor signaling protein serine/threonine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005024 // transforming growth factor beta-activated receptor activity // inferred from electronic annotation /// 0005025 // transforming growth factor beta receptor activity, type I // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016361 // activin receptor activity, type I // inferred from direct assay /// 0016361 // activin receptor activity, type I // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019838 // growth factor binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046332 // SMAD binding // inferred from direct assay /// 0046332 // SMAD binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0048185 // activin binding // inferred from direct assay /// 0048185 // activin binding // inferred from electronic annotation /// 0050431 // transforming growth factor beta binding // inferred from direct assay /// 0050431 // transforming growth factor beta binding // inferred from electronic annotation","chr2:158622578-158732342 (-) // 99.9 // q24.1"]
["11754542_x_at",43.21447,43.503956,45.534805,43.55594,45.674606,45.177837,-0.037727833,-0.028095722,0.037727356,-0.02637291,0.04215002,0.02637291,0.7968937,0.49838975,-1.0163628,-0.023415457,1.0163628,"down","ZNF594",84622.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:5082830-5095157 (-) // 81.09 // p13.2"]
["11736640_a_at",270.0407,255.36957,262.21875,235.97015,239.39967,255.18681,0.08110666,5.1641464E-4,0.03870058,-0.11346531,-0.092648506,-5.1641464E-4,0.38387272,0.05953738,1.0784689,0.1089846,1.0784689,"up","ESRP2",80004.0,"0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0043484 // regulation of RNA splicing // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003729 // mRNA binding // inferred from direct assay","chr16:68262449-68270487 (-) // 95.98 // q22.1"]
["11763281_s_at",23.699518,19.635748,23.743769,27.230362,17.418524,22.234081,0.046042442,-0.22533274,0.04873371,0.24640083,-0.39819288,-0.046042442,0.9747026,0.9190758,1.0156659,0.022425894,1.0156659,"up","RPL23AP7 /// RPL23AP82","118433 /// 284942","0006412 // translation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005840 // ribosome // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // inferred from electronic annotation","chr2:114367303-114384617 (-) // 33.97 // q13"]
["11737624_a_at",12.770002,11.61822,12.033779,11.801161,11.599945,11.154793,0.12510014,-0.011269808,0.039431095,0.011270046,-0.013540506,-0.06999493,0.5663674,0.18122151,1.0534892,0.07517553,1.0534892,"up","GAB2",9846.0,"0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from direct assay /// 0007229 // integrin-mediated signaling pathway // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0016477 // cell migration // inferred from electronic annotation /// 0030316 // osteoclast differentiation // inferred from mutant phenotype /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0043306 // positive regulation of mast cell degranulation // inferred from sequence or structural similarity /// 0048015 // phosphatidylinositol-mediated signaling // inferred from sequence or structural similarity","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0005068 // transmembrane receptor protein tyrosine kinase adaptor activity // inferred from direct assay /// 0005070 // SH3/SH2 adaptor activity // inferred from reviewed computational analysis /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0005547 // phosphatidylinositol-3,4,5-trisphosphate binding // inferred from sequence or structural similarity /// 0043325 // phosphatidylinositol-3,4-bisphosphate binding // inferred from sequence or structural similarity","chr11:77926341-78128862 (-) // 93.28 // q14.1"]
["11719362_at",118.344894,123.155304,113.92252,112.12501,107.819466,113.77915,0.05585289,0.11333418,9.088516E-4,-0.022036076,-0.0785265,-9.083748E-4,0.43546602,0.08572923,1.0647556,0.09052226,1.0647556,"up","FAM178A",55719.0,"","","","chr10:102672325-102724889 (+) // 98.28 // q24.31"]
["11730351_at",162.37067,169.63354,178.37402,137.37402,163.67267,156.54068,-0.0057611465,0.057368755,0.12985325,-0.24694347,0.0057611465,-0.05851412,0.50869054,0.13341606,1.1175859,0.16038571,1.1175859,"up","ANKRD52",283373.0,"","","","chr12:56631590-56652175 (-) // 98.74 // q13.3"]
["11718611_at",29.217419,31.042963,25.170021,26.512276,26.428373,28.103611,0.09812069,0.18555832,-0.11700153,-0.0420475,-0.04662037,0.0420475,0.7941041,0.49327034,1.0505168,0.071099296,1.0505168,"up","TP53INP1",94241.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006914 // autophagy // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0006950 // response to stress // traceable author statement /// 0006950 // response to stress // inferred from electronic annotation /// 0007050 // cell cycle arrest // traceable author statement /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from sequence or structural similarity /// 0010508 // positive regulation of autophagy // inferred from mutant phenotype /// 0030336 // negative regulation of cell migration // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0048102 // autophagic cell death // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005776 // autophagic vacuole // inferred from direct assay /// 0005776 // autophagic vacuole // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0016605 // PML body // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0016209 // antioxidant activity // inferred from sequence or structural similarity /// 0016209 // antioxidant activity // inferred from electronic annotation","chr8:95938199-95961726 (-) // 92.51 // q22.1"]
["11739232_x_at",48.325085,44.48542,42.443134,34.20703,38.76277,40.646854,0.21843481,0.09899521,0.031193733,-0.28004456,-0.09966564,-0.031193733,0.36487523,0.051617075,1.1918279,0.2531759,1.1918279,"up","RASSF2",9770.0,"0007049 // cell cycle // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr20:4760668-4803050 (-) // 90.41 // p13"]
["AFFX-HSAC07/X00351_3_at",12551.465,12449.349,12790.407,11881.688,12074.463,11738.822,0.033842087,0.02205658,0.061048508,-0.045274734,-0.022055626,-0.06272602,0.17878897,0.00753487,1.0587299,0.08233456,1.0587299,"up",0.061048508,"ACTB /// ACTB /// LOC100505829","100505829 /// 60","0006457 // protein folding // traceable author statement /// 0006928 // cellular component movement // traceable author statement /// 0007409 // axonogenesis // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0034329 // cell junction assembly // traceable author statement /// 0034332 // adherens junction organization // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045214 // sarcomere organization // inferred from electronic annotation /// 0045216 // cell-cell junction organization // traceable author statement /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement /// 0051592 // response to calcium ion // inferred from electronic annotation","0005625 // soluble fraction // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005856 // cytoskeleton // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0030016 // myofibril // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0030863 // cortical cytoskeleton // inferred from electronic annotation /// 0031941 // filamentous actin // inferred from electronic annotation /// 0035267 // NuA4 histone acetyltransferase complex // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation /// 0070688 // MLL5-L complex // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0005200 // structural constituent of cytoskeleton // traceable author statement /// 0005200 // structural constituent of cytoskeleton // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0019894 // kinesin binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0030957 // Tat protein binding // inferred from physical interaction /// 0050998 // nitric-oxide synthase binding // inferred from physical interaction"]
["11728692_a_at",73.97546,77.90406,71.25527,72.695206,77.239655,76.54068,-0.024590015,0.05006218,-0.078639984,-0.049776554,0.037704945,0.024590015,0.87500954,0.6602385,-1.0152925,-0.021895455,1.0152925,"down","LOC728802 /// PDE4DIP","728802 /// 9659","0043623 // cellular protein complex assembly // inferred from sequence or structural similarity","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from sequence or structural similarity /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005813 // centrosome // inferred from sequence or structural similarity /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0030016 // myofibril // inferred from sequence or structural similarity","0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from sequence or structural similarity","chr1:144890591-144932455 (-) // 99.45 // q21.1"]
["11742877_x_at",127.43351,119.4593,118.61357,133.40672,125.88925,128.37411,0.008794785,-0.084430695,-0.094680786,0.07488155,-0.008794785,0.019404888,0.47003186,0.10654796,-1.0608859,-0.08526951,1.0608859,"down","SGSM3",27352.0,"0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0032313 // regulation of Rab GTPase activity // inferred from electronic annotation /// 0032483 // regulation of Rab protein signal transduction // inferred from expression pattern /// 0032486 // Rap protein signal transduction // inferred from expression pattern /// 0032851 // positive regulation of Rab GTPase activity // inferred from electronic annotation /// 0045732 // positive regulation of protein catabolic process // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005921 // gap junction // inferred from electronic annotation","0005097 // Rab GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0017137 // Rab GTPase binding // inferred from direct assay","chr22:40766588-40806289 (+) // 95.74 // q13.1"]
["11747293_a_at",8.851239,9.756377,9.213405,9.750789,8.632384,9.082349,-0.0475204,0.092945814,0.010334492,0.09211922,-0.083640814,-0.010334253,0.92727697,0.78318465,1.013401,0.019205201,1.013401,"up","CD1B",910.0,"0006955 // immune response // inferred from electronic annotation /// 0019882 // antigen processing and presentation // inferred from electronic annotation","0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0005515 // protein binding // inferred from physical interaction","chr1:158300085-158301828 (-) // 95.85 // q23.1"]
["11742860_a_at",8.358899,7.6452384,6.9460273,7.118441,6.903514,7.2567987,0.2178657,0.08911443,-0.049259186,-0.013885975,-0.058116436,0.013885975,0.63744336,0.25816488,1.0757025,0.1052792,1.0757025,"up","GPR116",221395.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007218 // neuropeptide signaling pathway // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement","chr6:46820246-46889742 (-) // 98.41 // p12.3"]
["11745498_a_at",257.85208,260.19974,273.78525,258.8205,248.88513,271.78568,-0.009242058,0.0038337708,0.07725906,-0.0038337708,-0.060305595,0.06668377,0.8645871,0.6386515,1.016142,0.02310204,1.016142,"up","IRF3",3661.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006917 // induction of apoptosis // traceable author statement /// 0006974 // response to DNA damage stimulus // traceable author statement /// 0008063 // Toll signaling pathway // traceable author statement /// 0009615 // response to virus // inferred from electronic annotation /// 0009617 // response to bacterium // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0031663 // lipopolysaccharide-mediated signaling pathway // inferred from electronic annotation /// 0032480 // negative regulation of type I interferon production // traceable author statement /// 0032481 // positive regulation of type I interferon production // traceable author statement /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0032727 // positive regulation of interferon-alpha production // inferred from sequence or structural similarity /// 0032728 // positive regulation of interferon-beta production // inferred from sequence or structural similarity /// 0032728 // positive regulation of interferon-beta production // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0039530 // MDA-5 signaling pathway // traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from electronic annotation /// 0043330 // response to exogenous dsRNA // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation /// 0045351 // type I interferon biosynthetic process // inferred from electronic annotation /// 0045358 // negative regulation of interferon-beta biosynthetic process // inferred from electronic annotation /// 0050689 // negative regulation of defense response to virus by host // inferred from electronic annotation /// 0050715 // positive regulation of cytokine secretion // inferred from electronic annotation /// 0051607 // defense response to virus // inferred from sequence or structural similarity /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060337 // type I interferon-mediated signaling pathway // traceable author statement /// 0071359 // cellular response to dsRNA // inferred from electronic annotation /// 0071888 // macrophage apoptotic process // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0010008 // endosome membrane // traceable author statement","0000975 // regulatory region DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003712 // transcription cofactor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from electronic annotation","chr19:50162904-50169116 (-) // 94.82 // q13.33"]
["11726129_at",11.305685,11.586143,11.11511,10.251933,12.4576235,10.9994335,0.01226306,0.04761505,-0.01226306,-0.12888932,0.15224338,-0.02735591,0.9499025,0.8477236,1.0119975,0.01720567,1.0119975,"up","HBZ",3050.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0015671 // oxygen transport // traceable author statement /// 0015671 // oxygen transport // inferred from electronic annotation /// 0043249 // erythrocyte maturation // inferred from electronic annotation","0005833 // hemoglobin complex // inferred from electronic annotation /// 0005833 // hemoglobin complex // traceable author statement","0005344 // oxygen transporter activity // inferred from electronic annotation /// 0005344 // oxygen transporter activity // traceable author statement /// 0005506 // iron ion binding // inferred from electronic annotation /// 0019825 // oxygen binding // inferred from electronic annotation /// 0020037 // heme binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:202683-204505 (+) // 92.67 // p13.3"]
["11730174_at",7.4206853,7.923767,8.0996685,7.752747,7.3826222,8.0996685,-0.078894615,0.015739202,0.047415733,-0.01573944,-0.086313725,0.047415733,0.9412195,0.82250714,1.0090278,0.012965978,1.0090278,"up","C4orf3",401152.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr4:120217574-120222256 (-) // 56.88 // q26"]
["11715132_x_at",63.040688,64.606186,68.89754,72.54068,72.02474,70.94036,-0.14924574,-0.11385679,-0.021077156,0.053261757,0.042963028,0.021077156,0.28817067,0.027310137,-1.0972005,-0.1338272,1.0972005,"down","HIST1H2BH",8345.0,"0006334 // nucleosome assembly // non-traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation","0000786 // nucleosome // non-traceable author statement /// 0000786 // nucleosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation","chr6:26251878-26252303 (+) // 100.0 // p22.2"]
["11736997_a_at",55.409622,53.17842,51.969425,51.212814,59.43583,53.819183,0.05065584,-0.0086398125,-0.041817665,-0.06297588,0.15185165,0.0086398125,0.87550586,0.6614082,-1.0227398,-0.032439105,1.0227398,"down","MOSPD3",64598.0,"0007507 // heart development // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005198 // structural molecule activity // inferred from electronic annotation","chr7:100209724-100212998 (+) // 95.52 // q22.1"]
["11721214_a_at",599.43713,584.77356,609.6006,654.2005,649.9942,597.5619,-0.012127876,-0.04785824,0.012127876,0.113996506,0.10469055,-0.016648293,0.52019334,0.14141321,-1.0594379,-0.08329898,1.0594379,"down","TMEM106B",54664.0,"","0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031902 // late endosome membrane // inferred from electronic annotation","","chr7:12250847-12276890 (+) // 91.68 // p21.3"]
["11739333_at",5.7125,5.9642467,5.7615933,5.70936,5.9372745,6.254457,-0.03401208,0.028205633,-0.021666527,-0.034805298,0.021666527,0.09675026,0.7605416,0.4336419,-1.0259981,-0.03702808,1.0259981,"down","SSTR2",6752.0,"0006937 // regulation of muscle contraction // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007187 // G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger // traceable author statement /// 0007193 // adenylate cyclase-inhibiting G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007218 // neuropeptide signaling pathway // inferred from electronic annotation /// 0007267 // cell-cell signaling // traceable author statement /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0007584 // response to nutrient // traceable author statement /// 0007586 // digestion // traceable author statement /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0021549 // cerebellum development // inferred from electronic annotation /// 0030432 // peristalsis // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation /// 0038170 // somatostatin signaling pathway // traceable author statement /// 0038170 // somatostatin signaling pathway // inferred from electronic annotation /// 0042594 // response to starvation // inferred from electronic annotation /// 0071385 // cellular response to glucocorticoid stimulus // inferred from electronic annotation /// 0071392 // cellular response to estradiol stimulus // inferred from electronic annotation","0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004994 // somatostatin receptor activity // inferred from electronic annotation /// 0004994 // somatostatin receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0030165 // PDZ domain binding // inferred from physical interaction /// 0030165 // PDZ domain binding // inferred from electronic annotation","chr17:71161115-71168060 (+) // 82.39 // q25.1"]
["11741018_a_at",172.22926,169.06978,180.4095,177.95544,171.95361,181.2811,-0.023592949,-0.050304413,0.04335165,0.023592949,-0.025903702,0.050305367,0.8002829,0.5039893,-1.0183123,-0.02618013,1.0183123,"down","FAM65A",79567.0,"","0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation","","chr16:67562716-67580688 (+) // 98.59 // q22.1"]
["11743968_a_at",5324.7676,5309.415,5225.2075,5428.776,5363.4785,5473.917,-0.0052261353,-0.009390831,-0.032455444,0.022683144,0.0052251816,0.03462982,0.32829314,0.038463976,-1.0256488,-0.036536857,1.0256488,"down","CYBA",1535.0,"0001938 // positive regulation of endothelial cell proliferation // inferred from electronic annotation /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0003106 // negative regulation of glomerular filtration by angiotensin // inferred from electronic annotation /// 0006801 // superoxide metabolic process // inferred from mutant phenotype /// 0006801 // superoxide metabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from mutant phenotype /// 0008217 // regulation of blood pressure // inferred from electronic annotation /// 0014895 // smooth muscle hypertrophy // inferred from sequence or structural similarity /// 0014895 // smooth muscle hypertrophy // inferred from electronic annotation /// 0017004 // cytochrome complex assembly // inferred from direct assay /// 0022900 // electron transport chain // inferred from electronic annotation /// 0030307 // positive regulation of cell growth // inferred from electronic annotation /// 0031667 // response to nutrient levels // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042554 // superoxide anion generation // inferred from mutant phenotype /// 0042554 // superoxide anion generation // inferred from electronic annotation /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0045087 // innate immune response // inferred from mutant phenotype /// 0045730 // respiratory burst // inferred from mutant phenotype /// 0050665 // hydrogen peroxide biosynthetic process // inferred from sequence or structural similarity /// 0050665 // hydrogen peroxide biosynthetic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from mutant phenotype /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0070555 // response to interleukin-1 // inferred from electronic annotation /// 0071230 // cellular response to amino acid stimulus // inferred from electronic annotation /// 0071260 // cellular response to mechanical stimulus // inferred from electronic annotation /// 0071310 // cellular response to organic substance // inferred from electronic annotation /// 0071333 // cellular response to glucose stimulus // inferred from electronic annotation /// 0071356 // cellular response to tumor necrosis factor // inferred from electronic annotation /// 0071407 // cellular response to organic cyclic compound // inferred from electronic annotation /// 0071480 // cellular response to gamma radiation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0030141 // secretory granule // traceable author statement /// 0030425 // dendrite // inferred from electronic annotation /// 0030670 // phagocytic vesicle membrane // traceable author statement /// 0043020 // NADPH oxidase complex // inferred from direct assay /// 0043020 // NADPH oxidase complex // inferred from mutant phenotype /// 0043020 // NADPH oxidase complex // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0097038 // perinuclear endoplasmic reticulum // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0009055 // electron carrier activity // inferred from direct assay /// 0009055 // electron carrier activity // traceable author statement /// 0016175 // superoxide-generating NADPH oxidase activity // inferred from mutant phenotype /// 0016175 // superoxide-generating NADPH oxidase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from physical interaction /// 0020037 // heme binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from physical interaction","chr16:88709696-88717560 (-) // 63.95 // q24.3"]
["11736749_a_at",17.03641,15.512322,14.058629,18.094116,15.447365,16.617887,0.08554554,-0.049661398,-0.19161987,0.17244482,-0.055715084,0.04966116,0.7130669,0.35886842,-1.0772668,-0.107375614,1.0772668,"down","SLC22A9",114571.0,"0006810 // transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr11:63137154-63177710 (+) // 86.42 // q12.3"]
["11746592_s_at",27.253016,26.155104,25.503193,29.913805,22.842604,28.227451,0.029661655,-0.029661655,-0.06607628,0.16405725,-0.22502708,0.08034468,0.94255865,0.826139,-1.0199395,-0.028483637,1.0199395,"down","LOC100288332 /// LOC100506193 /// LOC642778 /// LOC642799 /// NPIP /// NPIPL3 /// PKD1P1","100288332 /// 100506193 /// 23117 /// 339044 /// 642778 /// 642799 /// 9284","0001502 // cartilage condensation // inferred from electronic annotation /// 0001568 // blood vessel development // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from sequence or structural similarity /// 0001822 // kidney development // inferred from electronic annotation /// 0001822 // kidney development // inferred from sequence or structural similarity /// 0001892 // embryonic placenta development // inferred from electronic annotation /// 0001892 // embryonic placenta development // inferred from sequence or structural similarity /// 0006611 // protein export from nucleus // inferred from electronic annotation /// 0006611 // protein export from nucleus // inferred from sequence or structural similarity /// 0006810 // transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from sequence or structural similarity /// 0007156 // homophilic cell adhesion // traceable author statement /// 0007160 // cell-matrix adhesion // traceable author statement /// 0007161 // calcium-independent cell-matrix adhesion // traceable author statement /// 0007218 // neuropeptide signaling pathway // inferred from electronic annotation /// 0007259 // JAK-STAT cascade // inferred from electronic annotation /// 0007259 // JAK-STAT cascade // inferred from sequence or structural similarity /// 0007507 // heart development // inferred from electronic annotation /// 0007507 // heart development // inferred from expression pattern /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016337 // cell-cell adhesion // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from sequence or structural similarity /// 0021510 // spinal cord development // inferred from expression pattern /// 0021915 // neural tube development // inferred from expression pattern /// 0031659 // positive regulation of cyclin-dependent protein kinase activity involved in G1/S // inferred from direct assay /// 0032092 // positive regulation of protein binding // inferred from electronic annotation /// 0032092 // positive regulation of protein binding // inferred from sequence or structural similarity /// 0042994 // cytoplasmic sequestering of transcription factor // inferred from electronic annotation /// 0042994 // cytoplasmic sequestering of transcription factor // inferred from sequence or structural similarity /// 0043588 // skin development // inferred from expression pattern /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0048565 // digestive tract development // inferred from expression pattern /// 0048754 // branching morphogenesis of a tube // inferred from direct assay /// 0048806 // genitalia development // inferred from expression pattern /// 0050982 // detection of mechanical stimulus // inferred from electronic annotation /// 0050982 // detection of mechanical stimulus // inferred from sequence or structural similarity /// 0051028 // mRNA transport // inferred from electronic annotation /// 0051216 // cartilage development // inferred from expression pattern /// 0060428 // lung epithelium development // inferred from expression pattern /// 0060674 // placenta blood vessel development // inferred from electronic annotation /// 0060674 // placenta blood vessel development // inferred from sequence or structural similarity /// 0072164 // mesonephric tubule development // inferred from expression pattern /// 0072177 // mesonephric duct development // inferred from expression pattern /// 0072205 // metanephric collecting duct development // inferred from expression pattern /// 0072218 // metanephric ascending thin limb development // inferred from expression pattern /// 0072237 // metanephric proximal tubule development // inferred from expression pattern /// 0072287 // metanephric distal tubule morphogenesis // inferred from expression pattern","0002133 // polycystin complex // inferred from electronic annotation /// 0002133 // polycystin complex // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005643 // nuclear pore // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0005929 // cilium // inferred from electronic annotation /// 0005929 // cilium // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016323 // basolateral plasma membrane // inferred from direct assay /// 0031512 // motile primary cilium // inferred from electronic annotation /// 0031512 // motile primary cilium // inferred from sequence or structural similarity /// 0031965 // nuclear membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005261 // cation channel activity // inferred from electronic annotation /// 0005261 // cation channel activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0030246 // carbohydrate binding // inferred from electronic annotation /// 0044325 // ion channel binding // inferred from physical interaction","chr16:70011367-70023987 (-) // 99.26 // q22.1"]
["11729410_a_at",5.875258,6.277275,6.1190047,5.7453246,5.661865,5.5947666,0.016131878,0.11161804,0.07477665,-0.016131878,-0.03724289,-0.054442406,0.2830526,0.02590136,1.074338,0.1034479,1.074338,"up","ZNF415",55786.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:53611132-53636145 (-) // 91.41 // q13.42"]
["11721848_at",165.07455,166.64082,186.68858,152.50046,177.81387,151.4037,-0.0068120956,0.0068120956,0.17070436,-0.12111616,0.10043812,-0.13152933,0.6853436,0.31935215,1.0774622,0.10763725,1.0774622,"up","REEP2",51308.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation","chr5:137774732-137782658 (+) // 92.04 // q31.2"]
["11761778_a_at",29.890036,34.209156,27.501272,30.171556,38.52859,32.812527,-0.07405329,0.1206646,-0.19421959,-0.060528755,0.29221153,0.060528755,0.70676965,0.3488705,-1.1069627,-0.14660658,1.1069627,"down","WDR45",11152.0,"0000045 // autophagic vacuole assembly // not recorded","0005737 // cytoplasm // not recorded","0005083 // small GTPase regulator activity // inferred from electronic annotation /// 0032266 // phosphatidylinositol-3-phosphate binding // not recorded /// 0080025 // phosphatidylinositol-3,5-bisphosphate binding // not recorded","chrX:48934732-48937553 (-) // 74.25 // p11.23"]
["11731939_a_at",16.45812,14.195807,18.509201,16.295551,20.51757,14.451464,0.0071606636,-0.2061739,0.1766038,-0.0071606636,0.32522106,-0.18042326,0.9285154,0.7875319,-1.0376709,-0.05334889,1.0376709,"down","UCP3",7352.0,"0000303 // response to superoxide // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0006629 // lipid metabolic process // traceable author statement /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006839 // mitochondrial transport // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0007584 // response to nutrient // inferred from electronic annotation /// 0007585 // respiratory gaseous exchange // traceable author statement /// 0009409 // response to cold // inferred from electronic annotation /// 0014823 // response to activity // inferred from electronic annotation /// 0015992 // proton transport // traceable author statement /// 0015992 // proton transport // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0032868 // response to insulin stimulus // inferred from electronic annotation /// 0032870 // cellular response to hormone stimulus // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0048545 // response to steroid hormone stimulus // inferred from electronic annotation /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation","0005739 // mitochondrion // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation","0005215 // transporter activity // traceable author statement /// 0017077 // oxidative phosphorylation uncoupler activity // inferred from electronic annotation","chr11:73711326-73720563 (-) // 92.25 // q13.4"]
["11743553_a_at",177.99275,171.50153,184.76671,181.65327,173.90779,169.59901,0.016748428,-0.036848545,0.070634365,0.046117306,-0.016747952,-0.052942753,0.8435621,0.5916635,1.01727,0.024702601,1.01727,"up","KIN",22944.0,"0006260 // DNA replication // inferred from direct assay /// 0006260 // DNA replication // inferred from electronic annotation /// 0006281 // DNA repair // inferred from electronic annotation /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006397 // mRNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from expression pattern /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016363 // nuclear matrix // inferred from direct assay","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from sequence or structural similarity /// 0003690 // double-stranded DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr10:7797191-7829935 (-) // 76.66 // p14"]
["11758285_s_at",478.3454,467.56104,458.7181,464.87396,457.2489,457.33505,0.050828934,0.017930984,-0.009615898,0.009615898,-0.01424408,-0.013972282,0.62986463,0.2479801,1.018125,0.025914779,1.018125,"up","GTF3C1",2975.0,"0006351 // transcription, DNA-dependent // inferred by curator /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006383 // transcription from RNA polymerase III promoter // inferred by curator /// 0006383 // transcription from RNA polymerase III promoter // traceable author statement /// 0009303 // rRNA transcription // traceable author statement /// 0009304 // tRNA transcription // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0042791 // 5S class rRNA transcription from RNA polymerase III type 1 promoter // inferred by curator /// 0042797 // tRNA transcription from RNA polymerase III promoter // inferred by curator","0000127 // transcription factor TFIIIC complex // inferred from direct assay /// 0000127 // transcription factor TFIIIC complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003677 // DNA binding // inferred by curator /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr16:27471776-27472301 (-) // 89.74 // p12.1"]
["11757037_s_at",5001.943,4986.7036,5054.0376,5266.3823,5297.625,5132.809,-0.026103973,-0.030506134,-0.011156082,0.048218727,0.05675316,0.011156082,0.23590471,0.015597539,-1.0434041,-0.06129801,1.0434041,"down","H3F3A /// H3F3B","3020 /// 3021","0006334 // nucleosome assembly // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement","0000786 // nucleosome // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation","chr17:73774152-73775853 (-) // 99.82 // q25.1"]
["11724973_a_at",6.637173,6.4465504,5.896477,6.413062,6.1562047,6.977586,0.04579854,0.003757,-0.12491703,-0.003757,-0.06272912,0.11795759,0.8466804,0.5980664,-1.0297382,-0.04227758,1.0297382,"down","MYRIP",25924.0,"0006886 // intracellular protein transport // inferred from electronic annotation /// 0032024 // positive regulation of insulin secretion // inferred from sequence or structural similarity","0001750 // photoreceptor outer segment // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0030133 // transport vesicle // inferred from electronic annotation /// 0031045 // dense core granule // inferred from sequence or structural similarity /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // non-traceable author statement /// 0017022 // myosin binding // inferred from electronic annotation /// 0017137 // Rab GTPase binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:39850913-40301812 (+) // 93.45 // p22.1"]
["11730180_s_at",110.29033,116.70735,112.756195,120.874016,126.76297,120.738655,-0.10608482,-0.024496555,-0.074184895,0.026112556,0.09474182,0.024496078,0.27748367,0.024457255,-1.0842562,-0.116705656,1.0842562,"down","KDSR",2531.0,"0006665 // sphingolipid metabolic process // traceable author statement /// 0006665 // sphingolipid metabolic process // inferred from electronic annotation /// 0006666 // 3-keto-sphinganine metabolic process // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation /// 0030148 // sphingolipid biosynthetic process // traceable author statement /// 0030148 // sphingolipid biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005615 // extracellular space // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0047560 // 3-dehydrosphinganine reductase activity // inferred from direct assay /// 0047560 // 3-dehydrosphinganine reductase activity // inferred from electronic annotation","chr18:60994807-61034516 (-) // 81.73 // q21.33"]
["11724053_a_at",81.58937,82.48333,84.664154,72.0271,81.5678,79.3538,1.9073486E-4,0.015912056,0.053560257,-0.17965078,-1.912117E-4,-0.03989172,0.5473736,0.16398333,1.0691509,0.09646552,1.0691509,"up","FGFRL1",53834.0,"0001501 // skeletal system development // inferred from electronic annotation /// 0001558 // regulation of cell growth // non-traceable author statement /// 0003179 // heart valve morphogenesis // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from direct assay /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from electronic annotation /// 0060412 // ventricular septum morphogenesis // inferred from electronic annotation /// 0060539 // diaphragm development // inferred from electronic annotation","0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005007 // fibroblast growth factor-activated receptor activity // inferred from direct assay /// 0005007 // fibroblast growth factor-activated receptor activity // inferred from electronic annotation /// 0008201 // heparin binding // inferred from direct assay /// 0017134 // fibroblast growth factor binding // inferred from electronic annotation","chr4:1006240-1020686 (+) // 75.49 // p16.3"]
["11741696_x_at",436.44647,479.91315,484.53012,454.68118,433.87772,479.54688,-0.09745884,0.039509773,0.053322792,-0.03840828,-0.10597515,0.03840828,0.8583216,0.6238579,1.0236928,0.033782907,1.0236928,"up","NSUN5P1",155400.0,"","","","chr7:75039645-75046065 (+) // 100.0 // q11.23 /// chr7:72418837-72425261 (-) // 98.71 // q11.23 /// chr7:72717226-72722792 (-) // 96.34 // q11.23"]
["11751535_s_at",12.47528,11.59436,11.297331,11.297331,12.494493,11.801363,0.092883825,-0.012765169,-0.050206423,-0.050206423,0.09510374,0.012765169,0.9626583,0.8850294,-1.0064323,-0.009250122,1.0064323,"down","CA3",761.0,"0006730 // one-carbon metabolic process // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0004089 // carbonate dehydratase activity // inferred from electronic annotation /// 0004089 // carbonate dehydratase activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016151 // nickel cation binding // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:86351086-86360746 (+) // 99.91 // q21.2"]
["11716209_a_at",658.8006,681.57574,659.30896,712.6895,650.0845,670.4911,-0.013244629,0.035787582,-0.012131691,0.1001873,-0.03245926,0.012131691,0.8531754,0.6123964,-1.0161754,-0.023149429,1.0161754,"down","VPS28",51160.0,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016032 // viral reproduction // traceable author statement /// 0016044 // cellular membrane organization // traceable author statement /// 0016197 // endosomal transport // traceable author statement /// 0031397 // negative regulation of protein ubiquitination // inferred from direct assay /// 0046788 // egress of virus within host cell // traceable author statement","0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0010008 // endosome membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0031902 // late endosome membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr8:145649000-145653895 (-) // 69.48 // q24.3"]
["11734043_at",6.3067484,7.2586565,6.7168326,6.0739565,6.8519654,6.1102576,-0.045442343,0.15736389,0.045442343,-0.09970212,0.07417917,-0.09110546,0.6896068,0.3251532,1.0653524,0.09133078,1.0653524,"up","KIAA0408 /// SOGA3","387104 /// 9729","","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr6:127761734-127840792 (-) // 96.66 // q22.33"]
["11762934_at",9.139434,7.470709,8.828131,9.20595,9.110116,8.70776,0.027315855,-0.2635436,-0.02268076,0.0377779,0.022680521,-0.042487144,0.72457266,0.37765664,-1.0660634,-0.09229324,1.0660634,"down","CD300LG",146894.0,"","0005768 // endosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0032585 // multivesicular body membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation","chr17:41924523-41935518 (+) // 75.83 // q21.31"]
["11737888_a_at",6.678679,7.191311,6.3003626,7.8923707,6.598411,6.8655796,-0.019909382,0.086782694,-0.104037285,0.2209866,-0.037353516,0.019909382,0.76962423,0.44957888,-1.0571905,-0.080235414,1.0571905,"down","HRH4",59340.0,"0006954 // inflammatory response // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation","0005624 // membrane fraction // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004969 // histamine receptor activity // non-traceable author statement /// 0004969 // histamine receptor activity // inferred from electronic annotation","chr18:22040592-22059920 (+) // 59.72 // q11.2"]
["11718294_s_at",7457.1,7381.1084,7881.559,7346.188,7115.4795,7315.3345,0.018198013,0.0034208298,0.09806538,-0.0034208298,-0.049456596,-0.009492874,0.51503193,0.13752954,1.0429608,0.060684882,1.0429608,"up","NME1-NME2 /// NME2","4831 /// 654364","0002762 // negative regulation of myeloid leukocyte differentiation // inferred from electronic annotation /// 0006165 // nucleoside diphosphate phosphorylation // inferred from direct assay /// 0006165 // nucleoside diphosphate phosphorylation // inferred from electronic annotation /// 0006183 // GTP biosynthetic process // inferred from electronic annotation /// 0006228 // UTP biosynthetic process // inferred from electronic annotation /// 0006241 // CTP biosynthetic process // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006897 // endocytosis // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0007595 // lactation // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0009117 // nucleotide metabolic process // inferred from electronic annotation /// 0009142 // nucleoside triphosphate biosynthetic process // inferred from direct assay /// 0015949 // nucleobase-containing small molecule interconversion // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030879 // mammary gland development // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043388 // positive regulation of DNA binding // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement /// 0045618 // positive regulation of keratinocyte differentiation // inferred from mutant phenotype /// 0045682 // regulation of epidermis development // inferred from mutant phenotype /// 0050679 // positive regulation of epithelial cell proliferation // inferred from mutant phenotype /// 0051591 // response to cAMP // inferred from electronic annotation /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement","0001726 // ruffle // inferred from direct assay /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005813 // centrosome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005882 // intermediate filament // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0004536 // deoxyribonuclease activity // inferred from direct assay /// 0004550 // nucleoside diphosphate kinase activity // inferred from electronic annotation /// 0004550 // nucleoside diphosphate kinase activity // inferred from direct assay /// 0004673 // protein histidine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005524 // ATP binding // non-traceable author statement /// 0005524 // ATP binding // inferred from direct assay /// 0005525 // GTP binding // inferred from direct assay /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0043015 // gamma-tubulin binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:49230925-49249104 (+) // 72.48 // q21.33"]
["11743861_a_at",304.82224,290.69934,309.89728,288.0944,287.3591,292.92654,0.062934875,-0.005505562,0.086756706,-0.018491745,-0.02217865,0.005505562,0.47241238,0.108115375,1.0423094,0.059783597,1.0423094,"up","NIPSNAP3A",25934.0,"","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr9:107509870-107522400 (+) // 96.54 // q31.1"]
["11715832_s_at",1066.7072,1049.4832,1113.9882,1024.2512,1116.7708,1011.9455,0.011742592,-0.011742592,0.07431221,-0.04685211,0.07791138,-0.06429005,0.81190675,0.52562314,1.025159,0.035847686,1.025159,"up","SURF4",6836.0,"0007030 // Golgi organization // inferred from mutant phenotype /// 0010638 // positive regulation of organelle organization // inferred from mutant phenotype /// 0032527 // protein exit from endoplasmic reticulum // inferred from mutant phenotype /// 0034498 // early endosome to Golgi transport // inferred from mutant phenotype","0000139 // Golgi membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0033116 // endoplasmic reticulum-Golgi intermediate compartment membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr9:136228335-136243000 (-) // 95.94 // q34.2"]
["11730835_a_at",399.37405,391.05273,399.13046,388.7635,407.1774,398.87408,0.0013437271,-0.02903366,4.6348572E-4,-0.037504196,0.029260635,-4.6348572E-4,0.9295471,0.7905318,-1.0042881,-0.006173162,1.0042881,"down","MTX2",10651.0,"0006626 // protein targeting to mitochondrion // inferred from electronic annotation /// 0006626 // protein targeting to mitochondrion // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006839 // mitochondrial transport // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement","0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","","chr2:177134143-177202751 (+) // 97.76 // q31.1"]
["11723092_at",54.0676,53.01393,56.70386,49.906776,48.94594,59.264774,0.014196396,-0.014196396,0.08287907,-0.10133219,-0.1293788,0.14660692,0.8370326,0.57903576,1.0393353,0.05566109,1.0393353,"up","FNIP2",57600.0,"0001932 // regulation of protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0008630 // DNA damage response, signal transduction resulting in induction of apoptosis // inferred from sequence or structural similarity","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr4:159690165-159828201 (+) // 97.59 // q32.1"]
["11725177_at",21.704407,20.20928,22.893833,22.07115,24.11162,22.93633,-0.050572395,-0.15354252,0.026398659,-0.026398659,0.101168156,0.029074192,0.6031807,0.21571387,-1.0672169,-0.09385338,1.0672169,"down","KCTD11",147040.0,"0007049 // cell cycle // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0040008 // regulation of growth // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0051260 // protein homooligomerization // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","","chr17:7255207-7258263 (+) // 94.51 // p13.1"]
["11762768_at",6.417644,6.488931,6.425784,6.4998507,6.713482,6.641653,-0.017149925,-0.0012128353,-0.015321255,0.0012128353,0.047867537,0.032348633,0.38118386,0.0584337,-1.0269536,-0.038370967,1.0269536,"down","ZNF215",7762.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016032 // viral reproduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0008270 // zinc ion binding // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:6953416-6977013 (+) // 62.35 // p15.4"]
["11743965_s_at",54.521416,55.804554,57.22125,52.54129,54.06826,50.921253,0.006020546,0.039580345,0.07574892,-0.047350883,-0.006020546,-0.09253454,0.3601158,0.049998462,1.0636955,0.08908528,1.0636955,"up","CERCAM /// LOC100506065","100506065 /// 51148","0006928 // cellular component movement // traceable author statement /// 0007155 // cell adhesion // inferred from direct assay /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007159 // leukocyte cell-cell adhesion // traceable author statement /// 0009103 // lipopolysaccharide biosynthetic process // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // inferred from electronic annotation /// 0005886 // plasma membrane // non-traceable author statement","","chr9:131182759-131199628 (+) // 92.03 // q34.11"]
["11741324_s_at",7.1466713,6.0742745,7.063967,7.1874294,6.921222,5.7638597,0.031518698,-0.2030406,0.014725924,0.039723158,-0.014725924,-0.27871752,0.9359113,0.8073085,1.0226469,0.0323081,1.0226469,"up","TRIM51 /// TRIM51EP /// TRIM51GP /// TRIM51HP","120824 /// 399940 /// 440041 /// 84767","","0005622 // intracellular // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:55650772-55659282 (+) // 98.6 // q11 /// chr11:89586007-89596233 (+) // 95.63 // q14.3 /// chr11:89714612-89724840 (-) // 95.51 // q14.3 /// chr11:55059364-55067885 (-) // 95.33 // q11"]
["11735795_at",62.618057,63.944096,57.874084,66.964264,66.04722,55.20755,-0.015116215,0.015116692,-0.1287775,0.08169699,0.06180334,-0.19682884,0.93789184,0.8135213,-1.0175852,-0.025149534,1.0175852,"down","GPSM1",26086.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0008277 // regulation of G-protein coupled receptor protein signaling pathway // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0001965 // G-protein alpha-subunit binding // inferred from electronic annotation /// 0005092 // GDP-dissociation inhibitor activity // inferred from electronic annotation /// 0030695 // GTPase regulator activity // inferred from electronic annotation","chr9:139221931-139236801 (+) // 86.97 // q34.3"]
["11741004_a_at",16.387695,16.957985,14.19281,15.407645,18.732727,15.486157,0.040816784,0.090168476,-0.16663599,-0.048150063,0.23376465,-0.040817022,0.8688079,0.6468962,-1.0425737,-0.060149357,1.0425737,"down","ALS2CR8",79800.0,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation","0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation","chr2:203776940-203851060 (+) // 91.59 // q33.2"]
["11763798_a_at",6.7321806,6.7321806,6.442995,7.4463677,6.7321806,6.410978,0.0,0.0,-0.06334233,0.14546323,0.0,-0.07052946,0.813545,0.5293295,-1.0324644,-0.046092015,1.0324644,"down","STMN4",81551.0,"0035556 // intracellular signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030426 // growth cone // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","","chr8:27096856-27115921 (-) // 99.84 // p21.2"]
["11731992_x_at",700.09436,720.50977,754.27936,655.5815,658.20685,640.2378,0.044504166,0.085972786,0.15205383,-0.05027008,-0.044504166,-0.08443737,0.20005402,0.010288062,1.1125839,0.1539141,1.1125839,"up","TROAP",10024.0,"0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement","0005515 // protein binding // inferred from physical interaction","chr12:49716970-49718160 (+) // 76.39 // q13.12"]
["11732719_at",384.8702,399.0318,419.52533,411.70734,437.60522,407.82526,-0.09041309,-0.03828144,0.03397274,0.00683403,0.09484482,-0.00683403,0.6385881,0.25940418,-1.0447725,-0.063188836,1.0447725,"down","EREG",2069.0,"0001525 // angiogenesis // inferred from electronic annotation /// 0001550 // ovarian cumulus expansion // inferred from sequence or structural similarity /// 0001550 // ovarian cumulus expansion // inferred from electronic annotation /// 0001556 // oocyte maturation // inferred from sequence or structural similarity /// 0001556 // oocyte maturation // inferred from electronic annotation /// 0001819 // positive regulation of cytokine production // inferred from sequence or structural similarity /// 0001819 // positive regulation of cytokine production // inferred from electronic annotation /// 0007143 // female meiosis // inferred from sequence or structural similarity /// 0007143 // female meiosis // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // inferred from sequence or structural similarity /// 0007173 // epidermal growth factor receptor signaling pathway // inferred from electronic annotation /// 0007267 // cell-cell signaling // inferred from direct assay /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from sequence or structural similarity /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from sequence or structural similarity /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0009299 // mRNA transcription // inferred from direct assay /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0009887 // organ morphogenesis // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // inferred from direct assay /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030216 // keratinocyte differentiation // traceable author statement /// 0030728 // ovulation // inferred from sequence or structural similarity /// 0030728 // ovulation // inferred from electronic annotation /// 0042060 // wound healing // traceable author statement /// 0042108 // positive regulation of cytokine biosynthetic process // inferred from direct assay /// 0042327 // positive regulation of phosphorylation // inferred from direct assay /// 0042327 // positive regulation of phosphorylation // inferred from sequence or structural similarity /// 0042327 // positive regulation of phosphorylation // inferred from electronic annotation /// 0042700 // luteinizing hormone signaling pathway // inferred from sequence or structural similarity /// 0042700 // luteinizing hormone signaling pathway // inferred from electronic annotation /// 0043434 // response to peptide hormone stimulus // inferred from electronic annotation /// 0043616 // keratinocyte proliferation // inferred from direct assay /// 0045089 // positive regulation of innate immune response // inferred from sequence or structural similarity /// 0045089 // positive regulation of innate immune response // inferred from electronic annotation /// 0045410 // positive regulation of interleukin-6 biosynthetic process // inferred from sequence or structural similarity /// 0045410 // positive regulation of interleukin-6 biosynthetic process // inferred from electronic annotation /// 0045740 // positive regulation of DNA replication // inferred from direct assay /// 0045740 // positive regulation of DNA replication // inferred from sequence or structural similarity /// 0045740 // positive regulation of DNA replication // inferred from electronic annotation /// 0045741 // positive regulation of epidermal growth factor-activated receptor activity // inferred from sequence or structural similarity /// 0045741 // positive regulation of epidermal growth factor-activated receptor activity // inferred from electronic annotation /// 0045840 // positive regulation of mitosis // inferred from sequence or structural similarity /// 0045840 // positive regulation of mitosis // inferred from electronic annotation /// 0045860 // positive regulation of protein kinase activity // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0048146 // positive regulation of fibroblast proliferation // inferred from direct assay /// 0048160 // primary follicle stage // inferred from sequence or structural similarity /// 0048160 // primary follicle stage // inferred from electronic annotation /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from sequence or structural similarity /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from electronic annotation /// 0050680 // negative regulation of epithelial cell proliferation // traceable author statement /// 0051151 // negative regulation of smooth muscle cell differentiation // inferred from direct assay /// 0051781 // positive regulation of cell division // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005154 // epidermal growth factor receptor binding // inferred from sequence or structural similarity /// 0005154 // epidermal growth factor receptor binding // traceable author statement /// 0005154 // epidermal growth factor receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // inferred from electronic annotation","chr4:75230859-75254477 (+) // 83.41 // q13.3"]
["11740723_x_at",31.685495,33.76012,34.398876,30.802416,37.63016,35.172462,-0.10501814,-0.013520718,0.013520718,-0.14579725,0.14304876,0.04560566,0.85666376,0.62091863,-1.0347568,-0.0492917,1.0347568,"down","LGALS9B /// LGALS9C","284194 /// 654346","","","0030246 // carbohydrate binding // inferred from electronic annotation","chr17:18380101-18398173 (+) // 94.88 // p11.2 /// chr17:20352793-20370848 (-) // 95.06 // p11.2"]
["11751552_at",84.357544,76.05102,84.869095,76.364555,81.82654,78.74389,0.0716486,-0.07790136,0.0803709,-0.07196522,0.027700424,-0.027700901,0.7730874,0.45487678,1.0343286,0.048694566,1.0343286,"up","RNF223",401934.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:1007125-1009687 (-) // 95.1 // p36.33"]
["11734940_a_at",12.862679,17.261433,14.057491,18.318392,15.18792,15.465751,-0.25280976,0.1715517,-0.124661684,0.25729227,-0.013076544,0.013076305,0.7188526,0.36809143,-1.1129616,-0.15440388,1.1129616,"down","SLC16A9",220963.0,"0006810 // transport // inferred from electronic annotation /// 0046415 // urate metabolic process // inferred from mutant phenotype /// 0055085 // transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0015293 // symporter activity // inferred from electronic annotation","chr10:61410522-61469837 (-) // 91.24 // q21.2"]
["11755071_a_at",5.8260694,6.335241,7.1592736,6.0372434,6.3582525,5.6510572,-0.0861218,0.034754753,0.21116853,-0.034754753,0.039985657,-0.13012385,0.7348442,0.39365146,1.0679901,0.094898224,1.0679901,"up","HMCN1",83872.0,"0007596 // blood coagulation // inferred from electronic annotation /// 0007601 // visual perception // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005604 // basement membrane // inferred from electronic annotation /// 0005938 // cell cortex // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0031012 // extracellular matrix // traceable author statement","0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation","chr1:186097341-186160079 (+) // 96.21 // q31.1"]
["11759789_x_at",5.4819603,5.9835525,5.9835525,5.959879,6.8223133,6.135465,-0.12631035,0.0,0.0,-0.005719185,0.18925881,0.036170483,0.5735341,0.18777235,-1.0832304,-0.1153401,1.0832304,"down","NLGN4Y",22829.0,"0007155 // cell adhesion // inferred from electronic annotation /// 0007416 // synapse assembly // not recorded","0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // not recorded /// 0009986 // cell surface // not recorded /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0045202 // synapse // not recorded /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0004091 // carboxylesterase activity // not recorded /// 0004872 // receptor activity // not recorded /// 0005515 // protein binding // inferred from physical interaction /// 0042043 // neurexin family protein binding // not recorded","chrY:16734097-16845419 (+) // 80.05 // q11.221"]
["11750395_a_at",58.73912,54.89236,55.20757,56.674294,49.235985,56.45212,0.073373795,-0.024342537,-0.016080856,0.021747112,-0.18123436,0.01608038,0.7826361,0.46978393,1.0415888,0.05878582,1.0415888,"up","GLI2",2736.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0001501 // skeletal system development // inferred from electronic annotation /// 0001501 // skeletal system development // inferred from sequence or structural similarity /// 0001649 // osteoblast differentiation // inferred from direct assay /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001822 // kidney development // inferred from electronic annotation /// 0001822 // kidney development // inferred from sequence or structural similarity /// 0002009 // morphogenesis of an epithelium // inferred from electronic annotation /// 0002076 // osteoblast development // inferred from electronic annotation /// 0002076 // osteoblast development // inferred from sequence or structural similarity /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007224 // smoothened signaling pathway // inferred from direct assay /// 0007224 // smoothened signaling pathway // inferred from electronic annotation /// 0007389 // pattern specification process // inferred from sequence or structural similarity /// 0007389 // pattern specification process // inferred from electronic annotation /// 0007411 // axon guidance // inferred from electronic annotation /// 0007411 // axon guidance // inferred from sequence or structural similarity /// 0007418 // ventral midline development // inferred from sequence or structural similarity /// 0007418 // ventral midline development // inferred from electronic annotation /// 0007442 // hindgut morphogenesis // inferred from electronic annotation /// 0007442 // hindgut morphogenesis // inferred from sequence or structural similarity /// 0007507 // heart development // inferred from electronic annotation /// 0007507 // heart development // inferred from sequence or structural similarity /// 0008283 // cell proliferation // inferred from direct assay /// 0008283 // cell proliferation // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008589 // regulation of smoothened signaling pathway // inferred from electronic annotation /// 0009913 // epidermal cell differentiation // inferred from direct assay /// 0009953 // dorsal/ventral pattern formation // inferred from electronic annotation /// 0009954 // proximal/distal pattern formation // inferred from sequence or structural similarity /// 0021508 // floor plate formation // inferred from electronic annotation /// 0021508 // floor plate formation // inferred from sequence or structural similarity /// 0021513 // spinal cord dorsal/ventral patterning // inferred from sequence or structural similarity /// 0021513 // spinal cord dorsal/ventral patterning // inferred from electronic annotation /// 0021517 // ventral spinal cord development // inferred from sequence or structural similarity /// 0021517 // ventral spinal cord development // inferred from electronic annotation /// 0021696 // cerebellar cortex morphogenesis // inferred from electronic annotation /// 0021696 // cerebellar cortex morphogenesis // inferred from sequence or structural similarity /// 0021775 // smoothened signaling pathway involved in ventral spinal cord interneuron specification // inferred from electronic annotation /// 0021775 // smoothened signaling pathway involved in ventral spinal cord interneuron specification // inferred from sequence or structural similarity /// 0021776 // smoothened signaling pathway involved in spinal cord motor neuron cell fate specification // inferred from electronic annotation /// 0021904 // dorsal/ventral neural tube patterning // inferred from electronic annotation /// 0021915 // neural tube development // inferred from electronic annotation /// 0021938 // smoothened signaling pathway involved in regulation of cerebellar granule cell precursor cell proliferation // inferred from electronic annotation /// 0021965 // spinal cord ventral commissure morphogenesis // inferred from electronic annotation /// 0021965 // spinal cord ventral commissure morphogenesis // inferred from sequence or structural similarity /// 0021983 // pituitary gland development // inferred from electronic annotation /// 0021983 // pituitary gland development // inferred from sequence or structural similarity /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0030324 // lung development // inferred from sequence or structural similarity /// 0030879 // mammary gland development // inferred from sequence or structural similarity /// 0030879 // mammary gland development // inferred from electronic annotation /// 0030902 // hindbrain development // inferred from sequence or structural similarity /// 0030902 // hindbrain development // inferred from electronic annotation /// 0032331 // negative regulation of chondrocyte differentiation // inferred from electronic annotation /// 0033089 // positive regulation of T cell differentiation in thymus // inferred from sequence or structural similarity /// 0035295 // tube development // inferred from sequence or structural similarity /// 0035295 // tube development // inferred from electronic annotation /// 0042475 // odontogenesis of dentin-containing tooth // inferred from electronic annotation /// 0042475 // odontogenesis of dentin-containing tooth // inferred from sequence or structural similarity /// 0042733 // embryonic digit morphogenesis // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from electronic annotation /// 0045740 // positive regulation of DNA replication // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048566 // embryonic digestive tract development // inferred from electronic annotation /// 0048566 // embryonic digestive tract development // inferred from sequence or structural similarity /// 0048589 // developmental growth // inferred from electronic annotation /// 0048589 // developmental growth // inferred from sequence or structural similarity /// 0048646 // anatomical structure formation involved in morphogenesis // inferred from electronic annotation /// 0048666 // neuron development // inferred from sequence or structural similarity /// 0048666 // neuron development // inferred from electronic annotation /// 0048754 // branching morphogenesis of a tube // inferred from electronic annotation /// 0048754 // branching morphogenesis of a tube // inferred from sequence or structural similarity /// 0048856 // anatomical structure development // inferred from electronic annotation /// 0060032 // notochord regression // inferred from electronic annotation /// 0060322 // head development // inferred from electronic annotation /// 0060513 // prostatic bud formation // inferred from electronic annotation /// 0060603 // mammary gland duct morphogenesis // inferred from electronic annotation /// 0060831 // smoothened signaling pathway involved in dorsal/ventral neural tube patterning // inferred from electronic annotation /// 0071407 // cellular response to organic cyclic compound // inferred from electronic annotation /// 0090103 // cochlea morphogenesis // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0031512 // motile primary cilium // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:121554871-121748562 (+) // 99.96 // q14.2"]
["11738202_x_at",483.4919,473.62607,509.0407,449.61542,472.05637,455.5362,0.03213787,0.0023946762,0.10642719,-0.07266235,-0.0023946762,-0.053788185,0.41464084,0.07391775,1.0643222,0.089935005,1.0643222,"up","DAXX",1616.0,"0000281 // cytokinesis after mitosis // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from sequence or structural similarity /// 0007257 // activation of JUN kinase activity // traceable author statement /// 0008625 // induction of apoptosis via death domain receptors // traceable author statement /// 0030521 // androgen receptor signaling pathway // inferred from direct assay /// 0031396 // regulation of protein ubiquitination // inferred from direct assay /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000792 // heterochromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from mutant phenotype /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005938 // cell cortex // inferred from electronic annotation /// 0016605 // PML body // inferred from direct assay /// 0016605 // PML body // inferred from electronic annotation /// 0016605 // PML body // traceable author statement /// 0043005 // neuron projection // inferred from electronic annotation /// 0044297 // cell body // inferred from electronic annotation","0002039 // p53 binding // inferred from physical interaction /// 0005057 // receptor signaling protein activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from direct assay /// 0019899 // enzyme binding // inferred from physical interaction /// 0031072 // heat shock protein binding // traceable author statement /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0047485 // protein N-terminus binding // inferred from physical interaction /// 0050681 // androgen receptor binding // inferred from physical interaction","chr6:33286335-33290793 (-) // 94.47 // p21.32"]
["11721048_s_at",108.694374,100.70731,116.87446,105.707306,95.89382,105.09453,0.0443964,-0.06571245,0.14907885,0.0041942596,-0.13637114,-0.004193783,0.6832436,0.31623566,1.0629284,0.08804447,1.0629284,"up","N6AMT2",221143.0,"0032259 // methylation // inferred from electronic annotation","","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr13:21302638-21348057 (-) // 88.65 // q12.11"]
["11725050_a_at",101.20205,107.427216,98.0801,99.58009,100.77251,89.68258,0.014722824,0.10084391,-0.030483246,-0.008586407,0.008586407,-0.159616,0.6579042,0.283327,1.0581664,0.08156649,1.0581664,"up","FAIM2",23017.0,"0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // non-traceable author statement /// 0007417 // central nervous system development // inferred from electronic annotation /// 0021549 // cerebellum development // inferred from sequence or structural similarity /// 0021549 // cerebellum development // inferred from electronic annotation /// 0021680 // cerebellar Purkinje cell layer development // inferred from sequence or structural similarity /// 0021680 // cerebellar Purkinje cell layer development // inferred from electronic annotation /// 0021681 // cerebellar granular layer development // inferred from sequence or structural similarity /// 0021681 // cerebellar granular layer development // inferred from electronic annotation /// 0021702 // cerebellar Purkinje cell differentiation // inferred from sequence or structural similarity /// 0021702 // cerebellar Purkinje cell differentiation // inferred from electronic annotation /// 0043523 // regulation of neuron apoptotic process // inferred from mutant phenotype /// 0043523 // regulation of neuron apoptotic process // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0045121 // membrane raft // inferred from direct assay /// 0045121 // membrane raft // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","","chr12:50260679-50298000 (-) // 94.11 // q13.12"]
["11754927_x_at",13.34558,11.051146,13.6906595,13.103687,14.560954,12.160658,0.013194561,-0.25897193,0.05002427,-0.013194799,0.13893723,-0.12094641,0.8547906,0.61621284,-1.047427,-0.066849776,1.047427,"down","PRKACB",5567.0,"0005975 // carbohydrate metabolic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006094 // gluconeogenesis // traceable author statement /// 0006112 // energy reserve metabolic process // traceable author statement /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006629 // lipid metabolic process // traceable author statement /// 0006833 // water transport // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007188 // adenylate cyclase-modulating G-protein coupled receptor signaling pathway // traceable author statement /// 0007202 // activation of phospholipase C activity // traceable author statement /// 0007243 // intracellular protein kinase cascade // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0019433 // triglyceride catabolic process // traceable author statement /// 0034199 // activation of protein kinase A activity // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0050796 // regulation of insulin secretion // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0071377 // cellular response to glucagon stimulus // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005952 // cAMP-dependent protein kinase complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004691 // cAMP-dependent protein kinase activity // inferred from direct assay /// 0004691 // cAMP-dependent protein kinase activity // inferred from electronic annotation /// 0004691 // cAMP-dependent protein kinase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from direct assay","chr1:84630322-84670977 (+) // 93.82 // p31.1"]
["11733355_x_at",15.221228,15.393371,15.786138,16.6186,16.21694,17.594086,-0.07199526,-0.055770636,-0.019421816,0.05471897,0.019421577,0.13701057,0.31700915,0.035144087,-1.0863179,-0.11944635,1.0863179,"down","C5AR1",728.0,"0000187 // activation of MAPK activity // traceable author statement /// 0006935 // chemotaxis // traceable author statement /// 0006935 // chemotaxis // inferred from electronic annotation /// 0006955 // immune response // traceable author statement /// 0006968 // cellular defense response // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007202 // activation of phospholipase C activity // traceable author statement /// 0007204 // elevation of cytosolic calcium ion concentration // traceable author statement /// 0007606 // sensory perception of chemical stimulus // traceable author statement /// 0030593 // neutrophil chemotaxis // inferred from electronic annotation /// 0032494 // response to peptidoglycan // inferred from electronic annotation /// 0050830 // defense response to Gram-positive bacterium // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004942 // anaphylatoxin receptor activity // inferred from electronic annotation /// 0004944 // C5a anaphylatoxin receptor activity // inferred from electronic annotation /// 0004944 // C5a anaphylatoxin receptor activity // traceable author statement","chr19:47813074-47825323 (+) // 71.91 // q13.32"]
["11721523_s_at",964.30475,904.91296,995.15497,993.08826,1004.7992,988.6108,-0.039173126,-0.13088322,0.0062589645,0.0032596588,0.020173073,-0.0032596588,0.59445274,0.20846462,-1.0434226,-0.061323557,1.0434226,"down","ZNF706",51123.0,"","0005622 // intracellular // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:102209271-102217960 (-) // 97.31 // q22.3"]
["11743114_at",2250.258,2260.2046,2329.7861,2149.2097,2159.9614,2255.378,-0.0016393661,0.004723549,0.048467636,-0.067923546,-0.06072426,0.0016393661,0.4467137,0.093253426,1.042119,0.059520066,1.042119,"up","DHX15",1665.0,"0006397 // mRNA processing // inferred from electronic annotation /// 0006397 // mRNA processing // traceable author statement /// 0008380 // RNA splicing // inferred by curator /// 0008380 // RNA splicing // inferred from electronic annotation","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005689 // U12-type spliceosomal complex // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003724 // RNA helicase activity // traceable author statement /// 0004386 // helicase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation","chr4:24529097-24586226 (-) // 96.31 // p15.2"]
["11722186_a_at",184.93527,183.11151,204.71887,163.69084,167.89685,172.3403,0.05802965,0.04373169,0.20465326,-0.1180172,-0.08141565,-0.043731213,0.29945996,0.030272942,1.1353939,0.18319283,1.1353939,"up","AKT1",207.0,"0000060 // protein import into nucleus, translocation // inferred from mutant phenotype /// 0001893 // maternal placenta development // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from direct assay /// 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0005977 // glycogen metabolic process // inferred from electronic annotation /// 0005978 // glycogen biosynthetic process // inferred from electronic annotation /// 0005979 // regulation of glycogen biosynthetic process // inferred from mutant phenotype /// 0006006 // glucose metabolic process // inferred from electronic annotation /// 0006412 // translation // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006464 // cellular protein modification process // traceable author statement /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006469 // negative regulation of protein kinase activity // inferred from mutant phenotype /// 0006469 // negative regulation of protein kinase activity // inferred from sequence or structural similarity /// 0006469 // negative regulation of protein kinase activity // inferred from electronic annotation /// 0006809 // nitric oxide biosynthetic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // traceable author statement /// 0006916 // anti-apoptosis // inferred from electronic annotation /// 0006924 // activation-induced cell death of T cells // inferred from mutant phenotype /// 0006954 // inflammatory response // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007281 // germ cell development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0008286 // insulin receptor signaling pathway // inferred from mutant phenotype /// 0008286 // insulin receptor signaling pathway // inferred from electronic annotation /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0008629 // induction of apoptosis by intracellular signals // traceable author statement /// 0008633 // activation of pro-apoptotic gene products // traceable author statement /// 0008637 // apoptotic mitochondrial changes // inferred from electronic annotation /// 0008643 // carbohydrate transport // inferred from electronic annotation /// 0009408 // response to heat // traceable author statement /// 0009725 // response to hormone stimulus // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0010748 // negative regulation of plasma membrane long-chain fatty acid transport // inferred from mutant phenotype /// 0010765 // positive regulation of sodium ion transport // inferred from electronic annotation /// 0010907 // positive regulation of glucose metabolic process // inferred from mutant phenotype /// 0010975 // regulation of neuron projection development // inferred from sequence or structural similarity /// 0010975 // regulation of neuron projection development // inferred from electronic annotation /// 0015758 // glucose transport // inferred from electronic annotation /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0016310 // phosphorylation // inferred from direct assay /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from direct assay /// 0018105 // peptidyl-serine phosphorylation // inferred from electronic annotation /// 0030030 // cell projection organization // inferred from electronic annotation /// 0030154 // cell differentiation // traceable author statement /// 0030163 // protein catabolic process // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0030307 // positive regulation of cell growth // inferred from direct assay /// 0030307 // positive regulation of cell growth // inferred from electronic annotation /// 0030334 // regulation of cell migration // inferred from mutant phenotype /// 0030334 // regulation of cell migration // traceable author statement /// 0030334 // regulation of cell migration // inferred from electronic annotation /// 0031018 // endocrine pancreas development // traceable author statement /// 0031295 // T cell costimulation // traceable author statement /// 0031659 // positive regulation of cyclin-dependent protein kinase activity involved in G1/S // inferred from direct assay /// 0031999 // negative regulation of fatty acid beta-oxidation // inferred from mutant phenotype /// 0032094 // response to food // inferred from electronic annotation /// 0032270 // positive regulation of cellular protein metabolic process // inferred from sequence or structural similarity /// 0032270 // positive regulation of cellular protein metabolic process // inferred from electronic annotation /// 0032436 // positive regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0032869 // cellular response to insulin stimulus // inferred from mutant phenotype /// 0032869 // cellular response to insulin stimulus // inferred from sequence or structural similarity /// 0032869 // cellular response to insulin stimulus // inferred from electronic annotation /// 0032880 // regulation of protein localization // inferred from electronic annotation /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from direct assay /// 0034405 // response to fluid shear stress // inferred from mutant phenotype /// 0035556 // intracellular signal transduction // inferred from direct assay /// 0042593 // glucose homeostasis // inferred from electronic annotation /// 0042640 // anagen // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // non-traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from sequence or structural similarity /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from electronic annotation /// 0043536 // positive regulation of blood vessel endothelial cell migration // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement /// 0045429 // positive regulation of nitric oxide biosynthetic process // inferred from mutant phenotype /// 0045600 // positive regulation of fat cell differentiation // inferred from mutant phenotype /// 0045725 // positive regulation of glycogen biosynthetic process // inferred from mutant phenotype /// 0045725 // positive regulation of glycogen biosynthetic process // non-traceable author statement /// 0045768 // positive regulation of anti-apoptosis // inferred from sequence or structural similarity /// 0045768 // positive regulation of anti-apoptosis // inferred from electronic annotation /// 0045792 // negative regulation of cell size // inferred from electronic annotation /// 0045884 // regulation of survival gene product expression // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046209 // nitric oxide metabolic process // traceable author statement /// 0046326 // positive regulation of glucose import // inferred from mutant phenotype /// 0046329 // negative regulation of JNK cascade // inferred from electronic annotation /// 0046777 // protein autophosphorylation // traceable author statement /// 0046889 // positive regulation of lipid biosynthetic process // inferred from mutant phenotype /// 0048009 // insulin-like growth factor receptor signaling pathway // inferred from mutant phenotype /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0050999 // regulation of nitric-oxide synthase activity // traceable author statement /// 0051000 // positive regulation of nitric-oxide synthase activity // inferred from mutant phenotype /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0051146 // striated muscle cell differentiation // inferred from electronic annotation /// 0060644 // mammary gland epithelial cell differentiation // traceable author statement /// 0060709 // glycogen cell differentiation involved in embryonic placenta development // inferred from electronic annotation /// 0060716 // labyrinthine layer blood vessel development // inferred from electronic annotation /// 0070141 // response to UV-A // inferred from direct assay /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation /// 0071364 // cellular response to epidermal growth factor stimulus // inferred from electronic annotation /// 0090004 // positive regulation of establishment of protein localization in plasma membrane // inferred from mutant phenotype /// 0090201 // negative regulation of release of cytochrome c from mitochondria // inferred from sequence or structural similarity /// 0090201 // negative regulation of release of cytochrome c from mitochondria // inferred from electronic annotation /// 2001047 // regulation of G1/S transition checkpoint // traceable author statement","0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005080 // protein kinase C binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred by curator /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0005547 // phosphatidylinositol-3,4,5-trisphosphate binding // inferred from direct assay /// 0016301 // kinase activity // inferred from direct assay /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from sequence or structural similarity /// 0019899 // enzyme binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0030235 // nitric-oxide synthase regulator activity // inferred from mutant phenotype /// 0042802 // identical protein binding // inferred from physical interaction /// 0043325 // phosphatidylinositol-3,4-bisphosphate binding // inferred from direct assay","chr14:105235685-105261441 (-) // 94.1 // q32.33"]
["11720622_a_at",459.55304,455.5377,477.29233,433.54056,474.8936,413.05698,0.00633049,-0.00633049,0.060972214,-0.07773399,0.053703308,-0.14756012,0.65719235,0.2826985,1.0552033,0.077521004,1.0552033,"up","CDK16",5127.0,"0006468 // protein phosphorylation // non-traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation","","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // non-traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004693 // cyclin-dependent protein kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chrX:47078075-47089396 (+) // 93.74 // p11.23"]
["11737847_a_at",103.88664,99.390625,101.00045,117.6706,110.27713,116.33398,-0.043061256,-0.1068902,-0.08370972,0.13668156,0.043061733,0.12020016,0.17152515,0.0066214576,-1.1312112,-0.17786826,1.1312112,"down","MR1",3140.0,"0002474 // antigen processing and presentation of peptide antigen via MHC class I // inferred from electronic annotation /// 0006955 // immune response // inferred from electronic annotation /// 0006955 // immune response // traceable author statement /// 0019882 // antigen processing and presentation // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0042612 // MHC class I protein complex // inferred from electronic annotation","0032393 // MHC class I receptor activity // traceable author statement","chr1:181003104-181024633 (+) // 99.92 // q25.3"]
["11738346_at",7.9231257,7.296799,7.439263,8.006174,8.113791,8.323795,-0.0075216293,-0.12632751,-0.09843159,0.0075218678,0.026784897,0.06365013,0.35854292,0.04935644,-1.0792875,-0.11007926,1.0792875,"down","ZNF713",349075.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:55980330-56008433 (+) // 75.8 // p11.2"]
["11723580_at",430.5959,419.6518,459.57736,420.09088,434.1979,426.8595,0.006286621,-0.030855179,0.10025978,-0.029346466,0.018304825,-0.006286621,0.79516107,0.49524772,1.0217247,0.03100652,1.0217247,"up","C6orf228",221710.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation","chr6:11094033-11138971 (+) // 76.8 // p24.2"]
["11728834_x_at",137.903,138.70735,137.21928,147.77074,150.91353,147.70735,-0.053739548,-0.045348644,-0.060909748,0.045968056,0.07632923,0.045348644,0.08459432,6.13178E-4,-1.0786409,-0.10921469,1.0786409,"down","C4orf32",132720.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr4:113066522-113110237 (+) // 91.55 // q25"]
["11735867_a_at",23.518337,24.766403,31.671036,22.971352,25.46816,20.082136,-0.037299156,0.037299156,0.39207888,-0.071249485,0.07760954,-0.26517248,0.6389835,0.26008308,1.162285,0.21696383,1.162285,"up","C5orf46",389336.0,"","0005576 // extracellular region // inferred from electronic annotation","","chr5:147272271-147286101 (-) // 87.39 // q32"]
["11763325_a_at",154.69339,165.53847,133.76202,156.61784,163.04068,158.03983,-0.024356365,0.07339859,-0.23409986,-0.0065197945,0.051463604,0.0065197945,0.7652014,0.441569,-1.0561688,-0.07884042,1.0561688,"down","FER",2241.0,"0000226 // microtubule cytoskeleton organization // inferred from mutant phenotype /// 0000278 // mitotic cell cycle // inferred from mutant phenotype /// 0001932 // regulation of protein phosphorylation // inferred from sequence or structural similarity /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006935 // chemotaxis // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from mutant phenotype /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0010591 // regulation of lamellipodium assembly // inferred from direct assay /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // inferred from mutant phenotype /// 0030335 // positive regulation of cell migration // inferred from mutant phenotype /// 0030838 // positive regulation of actin filament polymerization // inferred from mutant phenotype /// 0031532 // actin cytoskeleton reorganization // inferred from sequence or structural similarity /// 0032496 // response to lipopolysaccharide // inferred from sequence or structural similarity /// 0032869 // cellular response to insulin stimulus // inferred from sequence or structural similarity /// 0033007 // negative regulation of mast cell activation involved in immune response // inferred from sequence or structural similarity /// 0033007 // negative regulation of mast cell activation involved in immune response // inferred from electronic annotation /// 0034446 // substrate adhesion-dependent cell spreading // inferred from sequence or structural similarity /// 0034614 // cellular response to reactive oxygen species // inferred from sequence or structural similarity /// 0035426 // extracellular matrix-cell signaling // inferred from sequence or structural similarity /// 0035556 // intracellular signal transduction // traceable author statement /// 0036006 // cellular response to macrophage colony-stimulating factor stimulus // inferred from mutant phenotype /// 0036119 // response to platelet-derived growth factor stimulus // inferred from sequence or structural similarity /// 0038028 // insulin receptor signaling pathway via phosphatidylinositol 3-kinase cascade // inferred from sequence or structural similarity /// 0038095 // Fc-epsilon receptor signaling pathway // inferred from sequence or structural similarity /// 0038109 // Kit signaling pathway // inferred from sequence or structural similarity /// 0042058 // regulation of epidermal growth factor receptor signaling pathway // inferred from mutant phenotype /// 0042503 // tyrosine phosphorylation of Stat3 protein // inferred from direct assay /// 0044331 // cell-cell adhesion mediated by cadherin // inferred from sequence or structural similarity /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from electronic annotation /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from sequence or structural similarity /// 0048008 // platelet-derived growth factor receptor signaling pathway // traceable author statement /// 0050904 // diapedesis // inferred from sequence or structural similarity /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from mutant phenotype /// 0070102 // interleukin-6-mediated signaling pathway // inferred from mutant phenotype","0000790 // nuclear chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005938 // cell cortex // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from direct assay /// 0030054 // cell junction // inferred from direct assay /// 0030054 // cell junction // inferred from electronic annotation /// 0031234 // extrinsic to internal side of plasma membrane // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003779 // actin binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // traceable author statement /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004715 // non-membrane spanning protein tyrosine kinase activity // inferred from direct assay /// 0004715 // non-membrane spanning protein tyrosine kinase activity // inferred from electronic annotation /// 0005154 // epidermal growth factor receptor binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0008092 // cytoskeletal protein binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from direct assay /// 0008289 // lipid binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0017137 // Rab GTPase binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0045295 // gamma-catenin binding // inferred from electronic annotation /// 0045296 // cadherin binding // inferred from electronic annotation /// 0050839 // cell adhesion molecule binding // inferred from electronic annotation","chr5:108527194-108532539 (+) // 97.54 // q21.3"]
["11737234_s_at",76.73235,69.9947,90.788216,75.06796,82.07332,80.85545,-0.037755013,-0.17034483,0.20491505,-0.06939316,0.059322834,0.037755013,0.97984946,0.93406564,-1.0071578,-0.010289744,1.0071578,"down","USP6",9098.0,"0006464 // cellular protein modification process // non-traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0016579 // protein deubiquitination // inferred from direct assay /// 0032313 // regulation of Rab GTPase activity // inferred from electronic annotation /// 0032851 // positive regulation of Rab GTPase activity // inferred from electronic annotation /// 0060627 // regulation of vesicle-mediated transport // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005764 // lysosome // traceable author statement /// 0005768 // endosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0055037 // recycling endosome // inferred from direct assay","0003676 // nucleic acid binding // traceable author statement /// 0004197 // cysteine-type endopeptidase activity // traceable author statement /// 0004221 // ubiquitin thiolesterase activity // inferred from electronic annotation /// 0004843 // ubiquitin-specific protease activity // inferred from direct assay /// 0005097 // Rab GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr17:5031686-5078339 (+) // 97.26 // p13.2"]
["11756771_x_at",159.02963,169.63158,171.12703,193.24872,186.95526,180.96017,-0.1460743,-0.052964687,-0.040302277,0.1350894,0.087323666,0.040302753,0.2479208,0.01784809,-1.1229956,-0.16735229,1.1229956,"down","SPTY2D1",144108.0,"","","","chr11:18627948-18634012 (-) // 95.06 // p15.1"]
["11728637_a_at",5329.659,5315.7607,5254.542,5441.3325,5295.8076,5445.409,0.0018835068,-0.0018835068,-0.018594742,0.03180027,-0.00730896,0.032881737,0.5430556,0.15877737,-1.0177072,-0.02532259,1.0177072,"down","ATP5A1",498.0,"0001937 // negative regulation of endothelial cell proliferation // inferred from mutant phenotype /// 0006172 // ADP biosynthetic process // inferred from electronic annotation /// 0006200 // ATP catabolic process // inferred from direct assay /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006629 // lipid metabolic process // inferred from sequence or structural similarity /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006754 // ATP biosynthetic process // inferred by curator /// 0006754 // ATP biosynthetic process // non-traceable author statement /// 0006754 // ATP biosynthetic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0009790 // embryo development // inferred from sequence or structural similarity /// 0009790 // embryo development // inferred from electronic annotation /// 0015986 // ATP synthesis coupled proton transport // inferred from electronic annotation /// 0015991 // ATP hydrolysis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0042776 // mitochondrial ATP synthesis coupled proton transport // inferred by curator /// 0042776 // mitochondrial ATP synthesis coupled proton transport // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046034 // ATP metabolic process // inferred from electronic annotation","0000275 // mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) // inferred from electronic annotation /// 0005739 // mitochondrion // inferred by curator /// 0005739 // mitochondrion // non-traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from direct assay /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005753 // mitochondrial proton-transporting ATP synthase complex // inferred from direct assay /// 0005759 // mitochondrial matrix // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0008180 // signalosome // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016469 // proton-transporting two-sector ATPase complex // inferred from electronic annotation /// 0033178 // proton-transporting two-sector ATPase complex, catalytic domain // inferred from electronic annotation /// 0045261 // proton-transporting ATP synthase complex, catalytic core F(1) // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from sequence or structural similarity /// 0005524 // ATP binding // inferred from electronic annotation /// 0016820 // hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from direct assay /// 0016887 // ATPase activity // inferred from electronic annotation /// 0022857 // transmembrane transporter activity // inferred by curator /// 0042288 // MHC class I protein binding // inferred from direct assay /// 0043499 // eukaryotic cell surface binding // inferred from direct assay /// 0043531 // ADP binding // inferred from electronic annotation /// 0046933 // hydrogen ion transporting ATP synthase activity, rotational mechanism // inferred from sequence or structural similarity /// 0046933 // hydrogen ion transporting ATP synthase activity, rotational mechanism // inferred from electronic annotation /// 0046961 // proton-transporting ATPase activity, rotational mechanism // inferred from electronic annotation","chr18:43664112-43678287 (-) // 93.66 // q21.1"]
["11722243_a_at",16.524126,19.455349,18.349508,21.842327,19.648153,20.085701,-0.2427063,-0.0071134567,-0.091538906,0.1598463,0.0071134567,0.038888454,0.4467984,0.09331119,-1.1347718,-0.18240224,1.1347718,"down","FBXO25",26260.0,"0016567 // protein ubiquitination // inferred from sequence or structural similarity /// 0016567 // protein ubiquitination // non-traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation","0000151 // ubiquitin ligase complex // non-traceable author statement /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0019005 // SCF ubiquitin ligase complex // inferred from sequence or structural similarity","0003779 // actin binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein ligase activity // non-traceable author statement","chr8:356807-419873 (+) // 95.1 // p23.3"]
["11743732_a_at",312.65616,292.11612,302.10092,331.56897,329.43185,325.88754,-0.029898643,-0.1279335,-0.079444885,0.054833412,0.04550457,0.029898643,0.22415964,0.013779723,-1.088623,-0.12250448,1.088623,"down","RCAN1",1827.0,"0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007417 // central nervous system development // traceable author statement /// 0007519 // skeletal muscle tissue development // inferred from electronic annotation /// 0008015 // blood circulation // traceable author statement /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0019722 // calcium-mediated signaling // inferred from electronic annotation /// 0043627 // response to estrogen stimulus // inferred from electronic annotation /// 0043666 // regulation of phosphoprotein phosphatase activity // inferred from electronic annotation /// 0048741 // skeletal muscle fiber development // inferred from electronic annotation /// 0051151 // negative regulation of smooth muscle cell differentiation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation","0003677 // DNA binding // traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr21:35888789-35987510 (-) // 95.78 // q22.12"]
["11724603_a_at",56.33652,64.80092,55.6199,60.040718,58.24396,63.882435,-0.069954395,0.13198948,-0.088424206,0.021916866,-0.02191639,0.111394405,0.84752625,0.5999773,-1.032347,-0.04592793,1.032347,"down","ZNF219",51222.0,"0006351 // transcription, DNA-dependent // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0004969 // histamine receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr14:21558236-21566808 (-) // 88.24 // q11.2"]
["11764222_at",18.42865,16.901743,17.414898,16.514069,16.22229,19.042967,0.1032033,-0.021574974,0.021574974,-0.055051327,-0.08076954,0.15051126,0.9080877,0.7366366,1.0206614,0.029504273,1.0206614,"up","","","","","","chr2:39011611-39012122 (-) // 83.98 // p22.1"]
["11722426_a_at",7.6502924,6.145644,6.7923546,7.4474874,6.294852,7.000972,0.14978099,-0.1661694,-0.021821737,0.11101985,-0.13156128,0.021821499,0.9731759,0.91480887,-1.0091659,-0.013163338,1.0091659,"down","FGL2",10875.0,"0007165 // signal transduction // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005577 // fibrinogen complex // traceable author statement /// 0005615 // extracellular space // inferred from electronic annotation","0005102 // receptor binding // inferred from electronic annotation","chr7:76822675-76829201 (-) // 84.6 // q11.23"]
["11757396_s_at",1447.9164,1385.1471,1506.02,1641.7435,1571.4211,1565.8735,-0.08487606,-0.14881516,-0.028113365,0.09637451,0.033215523,0.028113365,0.2885798,0.027426481,-1.1017798,-0.13983594,1.1017798,"down","ANXA8 /// ANXA8L1 /// ANXA8L2","244 /// 653145 /// 728113","0007596 // blood coagulation // inferred from electronic annotation /// 0007599 // hemostasis // inferred from electronic annotation","","0005509 // calcium ion binding // inferred from electronic annotation /// 0005544 // calcium-dependent phospholipid binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr10:47157982-47158897 (-) // 84.59 // q11.22"]
["11758071_s_at",20.216475,22.203121,24.577553,23.328955,18.719723,19.189379,-0.06761551,0.06761551,0.2141943,0.13897467,-0.17858791,-0.14283895,0.71620744,0.3641863,1.0959755,0.13221557,1.0959755,"up","SULF1",23213.0,"0001822 // kidney development // inferred from sequence or structural similarity /// 0001822 // kidney development // inferred from electronic annotation /// 0001937 // negative regulation of endothelial cell proliferation // inferred from direct assay /// 0002063 // chondrocyte development // inferred from sequence or structural similarity /// 0002063 // chondrocyte development // inferred from electronic annotation /// 0003094 // glomerular filtration // inferred from sequence or structural similarity /// 0003094 // glomerular filtration // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0010575 // positive regulation vascular endothelial growth factor production // inferred from sequence or structural similarity /// 0010575 // positive regulation vascular endothelial growth factor production // inferred from electronic annotation /// 0014846 // esophagus smooth muscle contraction // inferred from sequence or structural similarity /// 0014846 // esophagus smooth muscle contraction // inferred from electronic annotation /// 0016525 // negative regulation of angiogenesis // inferred from direct assay /// 0030177 // positive regulation of Wnt receptor signaling pathway // inferred from direct assay /// 0030201 // heparan sulfate proteoglycan metabolic process // inferred from direct assay /// 0030201 // heparan sulfate proteoglycan metabolic process // non-traceable author statement /// 0030201 // heparan sulfate proteoglycan metabolic process // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // inferred from mutant phenotype /// 0030513 // positive regulation of BMP signaling pathway // inferred from mutant phenotype /// 0032836 // glomerular basement membrane development // inferred from sequence or structural similarity /// 0032836 // glomerular basement membrane development // inferred from electronic annotation /// 0035860 // glial cell-derived neurotrophic factor receptor signaling pathway // inferred from sequence or structural similarity /// 0035860 // glial cell-derived neurotrophic factor receptor signaling pathway // inferred from electronic annotation /// 0040036 // regulation of fibroblast growth factor receptor signaling pathway // inferred from mutant phenotype /// 0040037 // negative regulation of fibroblast growth factor receptor signaling pathway // inferred from mutant phenotype /// 0040037 // negative regulation of fibroblast growth factor receptor signaling pathway // inferred from sequence or structural similarity /// 0040037 // negative regulation of fibroblast growth factor receptor signaling pathway // inferred from electronic annotation /// 0048010 // vascular endothelial growth factor receptor signaling pathway // inferred from direct assay /// 0048706 // embryonic skeletal system development // inferred from sequence or structural similarity /// 0048706 // embryonic skeletal system development // inferred from electronic annotation /// 0051216 // cartilage development // inferred from sequence or structural similarity /// 0051216 // cartilage development // inferred from electronic annotation /// 0060348 // bone development // inferred from sequence or structural similarity /// 0060348 // bone development // inferred from electronic annotation /// 0060384 // innervation // inferred from sequence or structural similarity /// 0060384 // innervation // inferred from electronic annotation /// 0060686 // negative regulation of prostatic bud formation // inferred from sequence or structural similarity /// 0060686 // negative regulation of prostatic bud formation // inferred from electronic annotation","0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // non-traceable author statement /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from sequence or structural similarity /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005795 // Golgi stack // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0009986 // cell surface // inferred from electronic annotation /// 0045121 // membrane raft // inferred from direct assay","0003824 // catalytic activity // inferred from electronic annotation /// 0004065 // arylsulfatase activity // inferred from direct assay /// 0004065 // arylsulfatase activity // inferred from mutant phenotype /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0008449 // N-acetylglucosamine-6-sulfatase activity // inferred from direct assay /// 0008449 // N-acetylglucosamine-6-sulfatase activity // inferred from mutant phenotype /// 0008449 // N-acetylglucosamine-6-sulfatase activity // inferred from electronic annotation /// 0008484 // sulfuric ester hydrolase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:70571572-70572292 (+) // 98.49 // q13.3"]
["11762015_at",7.379248,6.4787307,8.066796,7.8767962,7.6676555,7.86166,-0.073336124,-0.26109886,0.055185795,0.020798922,-0.018024445,0.018024206,0.70088863,0.3412627,-1.0717853,-0.100015976,1.0717853,"down","EPB41L4A",64097.0,"","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0019898 // extrinsic to membrane // inferred from electronic annotation","0008092 // cytoskeletal protein binding // inferred from electronic annotation","chr5:111599122-111755010 (-) // 86.01 // q22.2"]
["11764105_at",11.612318,11.123354,10.304295,12.29599,11.374485,10.854661,0.045959473,-0.016104698,-0.12645078,0.12849164,0.016104698,-0.051381588,0.7605416,0.43360326,-1.0448315,-0.063270316,1.0448315,"down","","","","","","chr7:48122624-48123183 (-) // 57.22 // p12.3"]
["11727897_a_at",1130.3743,1144.372,1189.3744,972.131,1002.70715,1017.0321,0.07621765,0.09397316,0.14962006,-0.14136028,-0.09668255,-0.07621765,0.11248124,0.0019595248,1.1577767,0.21135704,1.1577767,"up","NAA38",51691.0,"0000398 // nuclear mRNA splicing, via spliceosome // non-traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0017070 // U6 snRNA binding // non-traceable author statement","chr7:117824085-117833660 (+) // 83.17 // q31.31"]
["11732797_x_at",128.44809,122.379074,136.88919,130.80992,142.43246,142.63933,-0.059054375,-0.12888384,0.03276825,-0.03276825,0.09003782,0.09213114,0.5641008,0.1791601,-1.0729059,-0.10152355,1.0729059,"down","KIAA1841",84542.0,"","","","chr2:61293004-61351411 (+) // 89.75 // p16.1"]
["11761694_at",38.809704,39.49886,36.976936,41.985813,40.143555,36.256954,-0.012696743,0.012696743,-0.08248854,0.10078764,0.036054134,-0.11085653,0.8597586,0.62687,-1.0253794,-0.036157846,1.0253794,"down","LOC100289424",1.00289424E8,"","","","chr10:134777218-134778783 (-) // 76.68 // q26.3"]
["11745160_s_at",52.16711,48.41626,52.438793,55.790592,44.070633,52.02354,0.001987934,-0.105660915,0.009481907,0.0988698,-0.24133492,-0.001987934,0.9622385,0.88372386,1.0116807,0.01675406,1.0116807,"up","TGFA",7039.0,"0000165 // MAPK cascade // inferred from direct assay /// 0000187 // activation of MAPK activity // inferred from direct assay /// 0001525 // angiogenesis // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0042060 // wound healing // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0043526 // neuroprotection // inferred from electronic annotation /// 0045741 // positive regulation of epidermal growth factor-activated receptor activity // inferred from direct assay /// 0045840 // positive regulation of mitosis // inferred from direct assay /// 0048523 // negative regulation of cellular process // inferred from electronic annotation /// 0050679 // positive regulation of epithelial cell proliferation // inferred from direct assay /// 0051480 // cytosolic calcium ion homeostasis // inferred from electronic annotation /// 0051781 // positive regulation of cell division // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // non-traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0001948 // glycoprotein binding // inferred from electronic annotation /// 0004708 // MAP kinase kinase activity // inferred from direct assay /// 0005154 // epidermal growth factor receptor binding // inferred from direct assay /// 0005154 // epidermal growth factor receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // inferred from direct assay /// 0008083 // growth factor activity // inferred from electronic annotation","chr2:70676450-70780904 (-) // 100.0 // p13.3"]
["11737647_at",7.884262,7.2945185,6.955403,7.627055,7.6526875,7.6033955,0.05009079,-0.062072277,-0.1307509,0.0022411346,0.0070815086,-0.0022411346,0.7380576,0.39759558,-1.0352204,-0.04993793,1.0352204,"down","EFCAB4B",84766.0,"0002115 // store-operated calcium entry // inferred from mutant phenotype /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0032237 // activation of store-operated calcium channel activity // inferred from mutant phenotype /// 0051928 // positive regulation of calcium ion transport // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay","0005509 // calcium ion binding // inferred from direct assay /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr12:3749553-3862366 (-) // 94.39 // p13.32"]
["11733277_a_at",6.4562182,6.779308,6.794152,6.6055417,6.672168,6.5667214,-0.040226936,0.0302217,0.03337717,-0.0072393417,0.0072393417,-0.015743017,0.86022365,0.6288105,1.0090784,0.013038245,1.0090784,"up","SLC2A2",6514.0,"0005975 // carbohydrate metabolic process // traceable author statement /// 0006112 // energy reserve metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0008643 // carbohydrate transport // inferred from electronic annotation /// 0008645 // hexose transport // traceable author statement /// 0009749 // response to glucose stimulus // inferred from electronic annotation /// 0015755 // fructose transport // inferred from electronic annotation /// 0015758 // glucose transport // not recorded /// 0015758 // glucose transport // traceable author statement /// 0015758 // glucose transport // inferred from electronic annotation /// 0031018 // endocrine pancreas development // traceable author statement /// 0035428 // hexose transmembrane transport // traceable author statement /// 0043434 // response to peptide hormone stimulus // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0050796 // regulation of insulin secretion // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0070837 // dehydroascorbic acid transport // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0005903 // brush border // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0031526 // brush border membrane // inferred from electronic annotation","0005158 // insulin receptor binding // inferred from electronic annotation /// 0005215 // transporter activity // inferred from electronic annotation /// 0005355 // glucose transmembrane transporter activity // not recorded /// 0005355 // glucose transmembrane transporter activity // inferred from electronic annotation /// 0005355 // glucose transmembrane transporter activity // traceable author statement /// 0015149 // hexose transmembrane transporter activity // traceable author statement /// 0022857 // transmembrane transporter activity // inferred from electronic annotation /// 0022891 // substrate-specific transmembrane transporter activity // inferred from electronic annotation /// 0033300 // dehydroascorbic acid transporter activity // inferred from electronic annotation /// 0055056 // D-glucose transmembrane transporter activity // inferred from electronic annotation","chr3:170713801-170744768 (-) // 99.31 // q26.2"]
["11730952_a_at",54.748222,49.63177,50.278667,44.38021,39.530636,44.675587,0.21743631,0.075888634,0.09457111,-0.085458755,-0.2524042,-0.075888634,0.26339138,0.021093236,1.2034831,0.26721588,1.2034831,"up","PDK3",5165.0,"0000160 // two-component signal transduction system (phosphorelay) // inferred from electronic annotation /// 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006006 // glucose metabolic process // inferred from electronic annotation /// 0006006 // glucose metabolic process // traceable author statement /// 0006090 // pyruvate metabolic process // traceable author statement /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0010510 // regulation of acetyl-CoA biosynthetic process from pyruvate // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018106 // peptidyl-histidine phosphorylation // inferred from electronic annotation /// 0023014 // signal transduction by phosphorylation // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement","0005739 // mitochondrion // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement /// 0005759 // mitochondrial matrix // inferred from electronic annotation","0000155 // two-component sensor activity // inferred from electronic annotation /// 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from direct assay /// 0004672 // protein kinase activity // traceable author statement /// 0004673 // protein histidine kinase activity // inferred from electronic annotation /// 0004740 // pyruvate dehydrogenase (acetyl-transferring) kinase activity // inferred from electronic annotation /// 0004740 // pyruvate dehydrogenase (acetyl-transferring) kinase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chrX:24483343-24558207 (+) // 99.17 // p22.11"]
["11718170_a_at",102.71892,105.66951,102.47733,103.46041,98.87402,102.47733,0.001698494,0.04255581,-0.001698494,0.012075901,-0.053340435,-0.001698494,0.6770354,0.30872142,1.0199555,0.028506232,1.0199555,"up","MLL4",9757.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation /// 0048096 // chromatin-mediated maintenance of transcription // non-traceable author statement /// 0051568 // histone H3-K4 methylation // inferred from direct assay /// 0051568 // histone H3-K4 methylation // inferred from mutant phenotype /// 0051568 // histone H3-K4 methylation // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0035097 // histone methyltransferase complex // inferred from direct assay /// 0035097 // histone methyltransferase complex // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0018024 // histone-lysine N-methyltransferase activity // inferred from electronic annotation /// 0042800 // histone methyltransferase activity (H3-K4 specific) // inferred from direct assay /// 0042800 // histone methyltransferase activity (H3-K4 specific) // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:36208910-36229779 (+) // 94.07 // q13.12"]
["11731567_a_at",330.58456,337.56512,349.7243,355.06094,367.20892,365.94232,-0.09212303,-0.061976433,-0.010924339,0.010924339,0.059458733,0.054473877,0.28672338,0.026829025,-1.0692705,-0.096626855,1.0692705,"down","MDM2",4193.0,"0000075 // cell cycle checkpoint // traceable author statement /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006461 // protein complex assembly // inferred from direct assay /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // inferred from mutant phenotype /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0007089 // traversing start control point of mitotic cell cycle // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0016567 // protein ubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from mutant phenotype /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0018205 // peptidyl-lysine modification // inferred from mutant phenotype /// 0030163 // protein catabolic process // inferred from electronic annotation /// 0031648 // protein destabilization // inferred from direct assay /// 0032436 // positive regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0034504 // protein localization to nucleus // inferred from direct assay /// 0042176 // regulation of protein catabolic process // inferred from direct assay /// 0042787 // protein ubiquitination involved in ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0042787 // protein ubiquitination involved in ubiquitin-dependent protein catabolic process // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043518 // negative regulation of DNA damage response, signal transduction by p53 class mediator // inferred from direct assay /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045184 // establishment of protein localization // inferred from direct assay /// 0045787 // positive regulation of cell cycle // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045931 // positive regulation of mitotic cell cycle // inferred from mutant phenotype /// 0046677 // response to antibiotic // inferred from expression pattern /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0071157 // negative regulation of cell cycle arrest // inferred from direct assay /// 0071157 // negative regulation of cell cycle arrest // inferred from electronic annotation /// 0071456 // cellular response to hypoxia // inferred from expression pattern","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from mutant phenotype /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from mutant phenotype /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0016604 // nuclear body // inferred from direct assay /// 0030666 // endocytic vesicle membrane // traceable author statement /// 0043234 // protein complex // inferred from direct assay","0002039 // p53 binding // inferred from physical interaction /// 0002039 // p53 binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0004842 // ubiquitin-protein ligase activity // inferred from mutant phenotype /// 0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:69201965-69239321 (+) // 78.58 // q15"]
["11720947_x_at",215.87404,207.91418,209.16872,202.52267,205.93193,203.86835,0.061112404,0.006910324,0.015589237,-0.030993938,-0.006910324,-0.02144003,0.3826634,0.05898419,1.0335815,0.047652144,1.0335815,"up","CA12",771.0,"0006730 // one-carbon metabolic process // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0004089 // carbonate dehydratase activity // inferred from electronic annotation /// 0004089 // carbonate dehydratase activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008270 // zinc ion binding // traceable author statement /// 0016829 // lyase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr15:63614615-63674659 (-) // 87.76 // q22.2"]
["11733669_a_at",13.507915,13.916186,15.920522,15.181711,13.66009,13.473277,-0.029560566,0.013398409,0.20752192,0.13896894,-0.013398409,-0.033264637,0.9072413,0.73505,1.0231502,0.03301796,1.0231502,"up","PAX3",5077.0,"0000435 // positive regulation of transcription from RNA polymerase II promoter by galactose // inferred from direct assay /// 0000435 // positive regulation of transcription from RNA polymerase II promoter by galactose // inferred from electronic annotation /// 0001755 // neural crest cell migration // inferred from electronic annotation /// 0001843 // neural tube closure // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0007517 // muscle organ development // inferred from electronic annotation /// 0007605 // sensory perception of sound // traceable author statement /// 0008283 // cell proliferation // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0009725 // response to hormone stimulus // inferred from electronic annotation /// 0009887 // organ morphogenesis // traceable author statement /// 0016477 // cell migration // inferred from electronic annotation /// 0021527 // spinal cord association neuron differentiation // inferred from electronic annotation /// 0021549 // cerebellum development // inferred from electronic annotation /// 0021915 // neural tube development // inferred from electronic annotation /// 0030521 // androgen receptor signaling pathway // non-traceable author statement /// 0032355 // response to estradiol stimulus // inferred from electronic annotation /// 0032526 // response to retinoic acid // inferred from electronic annotation /// 0032570 // response to progesterone stimulus // inferred from electronic annotation /// 0032870 // cellular response to hormone stimulus // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043967 // histone H4 acetylation // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045666 // positive regulation of neuron differentiation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // non-traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048066 // developmental pigmentation // inferred from electronic annotation /// 0048663 // neuron fate commitment // inferred from electronic annotation /// 0060206 // estrous cycle phase // inferred from electronic annotation /// 0060594 // mammary gland specification // inferred from electronic annotation /// 2001038 // regulation of cellular response to drug // inferred from electronic annotation /// 2001141 // regulation of RNA biosynthetic process // inferred from electronic annotation","0000790 // nuclear chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from electronic annotation /// 0003713 // transcription coactivator activity // non-traceable author statement /// 0004402 // histone acetyltransferase activity // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0016922 // ligand-dependent nuclear receptor binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0030374 // ligand-dependent nuclear receptor transcription coactivator activity // inferred from direct assay /// 0035257 // nuclear hormone receptor binding // inferred from direct assay /// 0035257 // nuclear hormone receptor binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from physical interaction /// 0050681 // androgen receptor binding // non-traceable author statement","chr2:223158348-223163700 (-) // 93.5 // q36.1"]
["11750492_a_at",194.67505,195.87488,211.74182,201.3247,203.38283,198.87082,-0.03960991,-0.03074503,0.08162832,0.00884676,0.023519993,-0.008846283,0.9760651,0.9238592,-1.0028337,-0.004082418,1.0028337,"down","RNF216",54476.0,"0006915 // apoptotic process // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0032648 // regulation of interferon-beta production // inferred from direct assay /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0050691 // regulation of defense response to virus by host // inferred from direct assay /// 0070936 // protein K48-linked ubiquitination // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:5662209-5821257 (-) // 99.92 // p22.1"]
["11754372_x_at",16.481962,16.611616,16.163872,15.920159,14.970684,14.8722105,0.03907442,0.0503788,0.010959148,-0.01095891,-0.09967375,-0.10919452,0.3101068,0.03303469,1.0767971,0.106746465,1.0767971,"up","CERS4",79603.0,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006665 // sphingolipid metabolic process // traceable author statement /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0030148 // sphingolipid biosynthetic process // traceable author statement /// 0030148 // sphingolipid biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046513 // ceramide biosynthetic process // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0050291 // sphingosine N-acyltransferase activity // inferred from electronic annotation","chr19:8315409-8327305 (+) // 87.21 // p13.2"]
["11753119_x_at",88.10547,95.91065,78.656204,75.488525,87.8319,73.23311,0.08407879,0.2065382,-0.07959223,-0.13889503,0.07959223,-0.18265676,0.6414076,0.26282477,1.1103349,0.15099485,1.1103349,"up","CMTM5",116173.0,"0006935 // chemotaxis // inferred from electronic annotation","0005615 // extracellular space // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005125 // cytokine activity // inferred from electronic annotation","chr14:23846254-23848980 (+) // 96.99 // q11.2"]
["11755632_a_at",25.000916,21.771233,21.269302,22.996168,24.093401,24.032066,0.08880377,-0.11075401,-0.14440441,-0.03178358,0.03546095,0.03178358,0.756948,0.42597285,-1.0477335,-0.067271866,1.0477335,"down","MYH14",79784.0,"0007411 // axon guidance // traceable author statement /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0030048 // actin filament-based movement // inferred from electronic annotation","0001725 // stress fiber // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016459 // myosin complex // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030426 // growth cone // inferred from electronic annotation","0000146 // microfilament motor activity // inferred from electronic annotation /// 0000166 // nucleotide binding // inferred from electronic annotation /// 0003774 // motor activity // inferred from electronic annotation /// 0003779 // actin binding // inferred from electronic annotation /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0030898 // actin-dependent ATPase activity // inferred from electronic annotation /// 0051015 // actin filament binding // inferred from electronic annotation","chr19:50783290-50813796 (+) // 92.75 // q13.33"]
["11755668_s_at",233.05725,214.0929,225.54668,217.66296,208.10352,214.46826,0.10925388,-0.013193607,0.061995983,0.010665894,-0.054128647,-0.010665894,0.5382476,0.1551248,1.0502467,0.07072827,1.0502467,"up","ATP5J2-PTCD1 /// PTCD1","100526740 /// 26024","","","","chr7:99016756-99036377 (-) // 99.84 // q22.1"]
["11717584_a_at",37.72038,39.741737,34.82115,40.396404,39.014698,37.24481,-0.024336815,0.050973892,-0.1397171,0.07454586,0.024336815,-0.04264164,0.7607859,0.43431935,-1.0398968,-0.056440424,1.0398968,"down","VAPB",9217.0,"0006665 // sphingolipid metabolic process // traceable author statement /// 0006874 // cellular calcium ion homeostasis // inferred from mutant phenotype /// 0006986 // response to unfolded protein // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // inferred from direct assay /// 0008219 // cell death // inferred from electronic annotation /// 0019048 // virus-host interaction // inferred from direct assay /// 0030148 // sphingolipid biosynthetic process // traceable author statement /// 0030968 // endoplasmic reticulum unfolded protein response // inferred from mutant phenotype /// 0044281 // small molecule metabolic process // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045070 // positive regulation of viral genome replication // inferred from mutant phenotype","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005198 // structural molecule activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from physical interaction /// 0048487 // beta-tubulin binding // inferred from direct assay","chr20:56964174-57022672 (+) // 94.01 // q13.32"]
["11755180_x_at",16.987082,17.678831,16.625986,14.562913,16.428223,18.263462,0.015499115,0.07308388,-0.015499115,-0.20664024,-0.032762527,0.12002134,0.82335246,0.5479182,1.0454725,0.06415512,1.0454725,"up","TCF7",6932.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // not recorded /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // not recorded /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006955 // immune response // traceable author statement /// 0007420 // brain development // not recorded /// 0016055 // Wnt receptor signaling pathway // not recorded /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0021915 // neural tube development // inferred from electronic annotation /// 0022008 // neurogenesis // not recorded /// 0030538 // embryonic genitalia morphogenesis // inferred from electronic annotation /// 0033153 // T cell receptor V(D)J recombination // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0046632 // alpha-beta T cell differentiation // inferred from electronic annotation /// 0048557 // embryonic digestive tract morphogenesis // inferred from electronic annotation /// 0048619 // embryonic hindgut morphogenesis // inferred from electronic annotation /// 0048699 // generation of neurons // not recorded /// 0060070 // canonical Wnt receptor signaling pathway // not recorded /// 0071353 // cellular response to interleukin-4 // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // not recorded","0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // not recorded /// 0003700 // sequence-specific DNA binding transcription factor activity // not recorded /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008013 // beta-catenin binding // not recorded /// 0043565 // sequence-specific DNA binding // not recorded /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay","chr5:133476225-133483927 (+) // 89.4 // q31.1"]
["11732370_a_at",594.5567,600.9285,623.31195,563.9578,586.29126,545.2235,0.010098457,0.02547741,0.07823849,-0.06612873,-0.010098457,-0.114868164,0.36016524,0.050100062,1.07299,0.10163655,1.07299,"up","CUX1",1523.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0000301 // retrograde transport, vesicle recycling within Golgi // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006891 // intra-Golgi vesicle-mediated transport // inferred from electronic annotation /// 0007275 // multicellular organismal development // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0042491 // auditory receptor cell differentiation // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030173 // integral to Golgi membrane // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0030674 // protein binding, bridging // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr7:101559392-101894560 (+) // 96.23 // q22.1"]
["11747698_x_at",10.854665,11.589985,12.916306,11.410423,11.675531,12.018176,-0.0998683,-0.005304575,0.15101004,-0.027831316,0.005304575,0.047034502,0.9784535,0.93022966,1.0049403,0.0071097575,1.0049403,"up","TCF4",6925.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006352 // transcription initiation, DNA-dependent // inferred from sequence or structural similarity /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0007399 // nervous system development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0065004 // protein-DNA complex assembly // inferred from sequence or structural similarity","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from sequence or structural similarity /// 0005667 // transcription factor complex // inferred from electronic annotation","0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from sequence or structural similarity /// 0001011 // sequence-specific DNA binding RNA polymerase recruiting transcription factor activity // inferred from sequence or structural similarity /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from sequence or structural similarity /// 0001087 // TFIIB-class binding transcription factor activity // inferred from sequence or structural similarity /// 0001093 // TFIIB-class transcription factor binding // inferred from sequence or structural similarity /// 0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003714 // transcription corepressor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from sequence or structural similarity /// 0046982 // protein heterodimerization activity // non-traceable author statement /// 0070888 // E-box binding // inferred from sequence or structural similarity","chr18:52895094-53089743 (-) // 97.67 // q21.2"]
["11729167_a_at",279.376,265.07428,264.15735,246.14378,240.42989,256.78436,0.10123062,0.025419235,0.020420074,-0.08147669,-0.11536121,-0.020420074,0.31155866,0.033420026,1.0878221,0.12144261,1.0878221,"up","DCTD",1635.0,"0006206 // pyrimidine base metabolic process // traceable author statement /// 0006220 // pyrimidine nucleotide metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0009165 // nucleotide biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046134 // pyrimidine nucleoside biosynthetic process // traceable author statement /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement","0005829 // cytosol // traceable author statement","0003824 // catalytic activity // inferred from electronic annotation /// 0004132 // dCMP deaminase activity // not recorded /// 0004132 // dCMP deaminase activity // inferred from electronic annotation /// 0004132 // dCMP deaminase activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016810 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr4:183811246-183838747 (-) // 96.16 // q35.1"]
["11721598_a_at",8.263211,8.200242,8.4241495,10.075616,8.654171,9.192216,-0.04726076,-0.05829692,-0.019432306,0.23883271,0.019432306,0.106449366,0.39759907,0.06548975,-1.1197951,-0.16323476,1.1197951,"down","EFS",10278.0,"0007155 // cell adhesion // inferred from electronic annotation /// 0035556 // intracellular signal transduction // traceable author statement","0005737 // cytoplasm // traceable author statement","0017124 // SH3 domain binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from physical interaction","chr14:23825610-23834961 (-) // 96.0 // q11.2"]
["11740575_a_at",7.859084,7.6738358,9.162314,8.197496,7.2426147,7.600408,0.017206669,-0.017206669,0.23855758,0.07802892,-0.10064387,-0.031077385,0.7170007,0.36550024,1.069856,0.09741669,1.069856,"up","SORCS1",114815.0,"0007218 // neuropeptide signaling pathway // non-traceable author statement","0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008188 // neuropeptide receptor activity // non-traceable author statement","chr10:108333420-108924466 (-) // 94.17 // q25.1"]
["11758323_s_at",252.31107,262.76462,260.54053,243.11421,255.03377,263.75552,-0.030895233,0.027672768,0.01540947,-0.08446407,-0.015409946,0.03310299,0.8146955,0.5316758,1.0184106,0.026319288,1.0184106,"up","VOPP1",81552.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007165 // signal transduction // inferred from mutant phenotype","0005768 // endosome // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from direct assay /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031301 // integral to organelle membrane // inferred from direct assay /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0004871 // signal transducer activity // inferred from mutant phenotype","chr1:148193220-148194190 (+) // 94.3 // q21.2 /// chr7:55540213-55640134 (-) // 90.13 // p11.2"]
["11732556_a_at",9.062076,9.04588,9.123357,10.544148,7.69196,8.412756,0.0012903214,-0.0012903214,0.011013508,0.21981955,-0.23519993,-0.10597277,0.91800845,0.760909,1.0310557,0.044122256,1.0310557,"up","FASLG",356.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // traceable author statement /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from genetic interaction /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from mutant phenotype /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // traceable author statement /// 0006925 // inflammatory cell apoptotic process // inferred from electronic annotation /// 0006955 // immune response // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008624 // induction of apoptosis by extracellular signals // inferred from direct assay /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0008624 // induction of apoptosis by extracellular signals // inferred from electronic annotation /// 0008625 // induction of apoptosis via death domain receptors // inferred from electronic annotation /// 0008633 // activation of pro-apoptotic gene products // traceable author statement /// 0016525 // negative regulation of angiogenesis // inferred from direct assay /// 0030644 // cellular chloride ion homeostasis // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0033554 // cellular response to stress // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from expression pattern /// 0043525 // positive regulation of neuron apoptotic process // inferred from electronic annotation /// 0045742 // positive regulation of epidermal growth factor receptor signaling pathway // inferred from electronic annotation /// 0046666 // retinal cell programmed cell death // inferred from electronic annotation /// 0048388 // endosomal lumen acidification // inferred from electronic annotation /// 0060554 // induction of necroptosis of activated-T cells // inferred from direct assay /// 0060555 // induction of necroptosis by extracellular signals // inferred from direct assay /// 0070265 // necrotic cell death // inferred from direct assay /// 0070848 // response to growth factor stimulus // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0005901 // caveola // inferred from electronic annotation /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043202 // lysosomal lumen // inferred from electronic annotation /// 0045121 // membrane raft // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0060205 // cytoplasmic membrane-bounded vesicle lumen // inferred from electronic annotation","0005102 // receptor binding // traceable author statement /// 0005125 // cytokine activity // inferred from electronic annotation /// 0005164 // tumor necrosis factor receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr1:172628147-172636013 (+) // 88.62 // q24.3"]
["11734601_at",11.712699,11.913439,11.235236,11.337992,11.269511,14.319303,0.02345419,0.047970533,-0.036588907,-0.02345419,-0.032194376,0.31334186,0.8284049,0.5583446,-1.0528398,-0.07428587,1.0528398,"down","TAS2R43 /// TAS2R45","259289 /// 259291","0001580 // detection of chemical stimulus involved in sensory perception of bitter taste // inferred from direct assay /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred by curator /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050909 // sensory perception of taste // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred by curator /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031514 // motile cilium // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation /// 0060170 // cilium membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0008527 // taste receptor activity // inferred from direct assay /// 0033038 // bitter taste receptor activity // inferred from direct assay","chr12:11243929-11244918 (-) // 82.6 // p13.2"]
["11736569_at",8.272869,9.417937,9.366046,8.967128,10.854665,7.650035,-0.14765525,0.039368153,0.031397104,-0.031397104,0.24420023,-0.26057673,0.98635644,0.9540183,-1.00675,-0.009705454,1.00675,"down","PON1",5444.0,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // inferred from electronic annotation /// 0009605 // response to external stimulus // non-traceable author statement /// 0009636 // response to toxin // inferred from electronic annotation /// 0010875 // positive regulation of cholesterol efflux // inferred from direct assay /// 0019439 // aromatic compound catabolic process // inferred from direct assay /// 0032411 // positive regulation of transporter activity // inferred from direct assay /// 0034445 // negative regulation of plasma lipoprotein particle oxidation // inferred from direct assay /// 0046395 // carboxylic acid catabolic process // inferred from direct assay /// 0046434 // organophosphate catabolic process // inferred from direct assay /// 0046470 // phosphatidylcholine metabolic process // inferred from direct assay /// 0051099 // positive regulation of binding // inferred from direct assay","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0034364 // high-density lipoprotein particle // inferred from direct assay /// 0034364 // high-density lipoprotein particle // traceable author statement /// 0034364 // high-density lipoprotein particle // inferred from electronic annotation /// 0034366 // spherical high-density lipoprotein particle // inferred from direct assay","0004063 // aryldialkylphosphatase activity // inferred from direct assay /// 0004063 // aryldialkylphosphatase activity // inferred from electronic annotation /// 0004064 // arylesterase activity // inferred from direct assay /// 0004064 // arylesterase activity // non-traceable author statement /// 0004064 // arylesterase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from direct assay /// 0005543 // phospholipid binding // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:94926987-94954019 (-) // 93.67 // q21.3"]
["11733011_x_at",19.948195,15.908748,16.01174,16.615807,16.615807,19.137075,0.26370192,-0.062736034,-0.053426266,0.0,0.0,0.20381403,0.96389246,0.88971984,-1.013087,-0.018758122,1.013087,"down","SLC44A4",80736.0,"0055085 // transmembrane transport // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr6:31830973-31846823 (-) // 87.5 // p21.33"]
["11752496_a_at",13.4407,14.031239,12.590609,16.09484,14.442453,11.62813,-0.031017065,0.031017065,-0.12527752,0.22897291,0.07269049,-0.24000645,0.8877805,0.68985164,-1.0441374,-0.062311515,1.0441374,"down","GAS7",8522.0,"0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0007050 // cell cycle arrest // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0030041 // actin filament polymerization // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0048812 // neuron projection morphogenesis // inferred from electronic annotation /// 0051017 // actin filament bundle assembly // inferred from electronic annotation","0001726 // ruffle // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005884 // actin filament // inferred from electronic annotation","0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0051015 // actin filament binding // inferred from electronic annotation","chr17:9819241-9939878 (-) // 99.9 // p13.1"]
["11744093_a_at",515.50885,499.45355,474.20752,464.0407,439.00146,478.58987,0.113842964,0.0681963,-0.006635666,-0.037902832,-0.117928505,0.006635666,0.45719123,0.09931495,1.0778824,0.1081998,1.0778824,"up","EEF1A2",1917.0,"0006184 // GTP catabolic process // inferred from electronic annotation /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006414 // translational elongation // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from electronic annotation /// 0010035 // response to inorganic substance // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005853 // eukaryotic translation elongation factor 1 complex // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003746 // translation elongation factor activity // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0008135 // translation factor activity, nucleic acid binding // non-traceable author statement","chr20:62119364-62130668 (-) // 86.17 // q13.33"]
["11733928_a_at",31.2765,28.032085,27.448093,28.041954,31.698275,30.187239,0.104316235,-0.053683758,-0.084056854,-0.053175926,0.12364149,0.053175926,0.8176443,0.5377884,-1.0369564,-0.052355275,1.0369564,"down","ARMC8",25852.0,"","","","chr3:137906147-137965728 (+) // 94.37 // q22.3"]
["11746668_a_at",581.00446,597.54016,621.00885,582.9064,596.51996,578.8738,-0.021368027,0.019118309,0.07469654,-0.01665306,0.01665306,-0.026668549,0.7026557,0.3434115,1.0231647,0.033038463,1.0231647,"up","ALDH9A1",223.0,"0001822 // kidney development // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0006081 // cellular aldehyde metabolic process // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation /// 0009437 // carnitine metabolic process // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042136 // neurotransmitter biosynthetic process // inferred from direct assay /// 0042445 // hormone metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045329 // carnitine biosynthetic process // inferred from electronic annotation /// 0045329 // carnitine biosynthetic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay","0004028 // 3-chloroallyl aldehyde dehydrogenase activity // traceable author statement /// 0004029 // aldehyde dehydrogenase (NAD) activity // inferred from direct assay /// 0004029 // aldehyde dehydrogenase (NAD) activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016620 // oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0019145 // aminobutyraldehyde dehydrogenase activity // inferred from direct assay /// 0019145 // aminobutyraldehyde dehydrogenase activity // inferred from electronic annotation /// 0033737 // 1-pyrroline dehydrogenase activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0043176 // amine binding // inferred from electronic annotation /// 0047105 // 4-trimethylammoniobutyraldehyde dehydrogenase activity // inferred from electronic annotation /// 0051287 // NAD binding // inferred from electronic annotation","chr1:165637910-165667823 (-) // 88.96 // q24.1"]
["11727335_a_at",15.206324,16.81138,17.298912,16.975822,16.52181,16.096798,-0.13223362,0.012533188,0.053776264,0.026576519,-0.012533188,-0.05013132,0.95994514,0.8775836,-1.0069175,-0.00994545,1.0069175,"down","ACMSD",130013.0,"0006569 // tryptophan catabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046874 // quinolinate metabolic process // inferred from direct assay","0005829 // cytosol // inferred from direct assay","0001760 // aminocarboxymuconate-semialdehyde decarboxylase activity // inferred from direct assay /// 0001760 // aminocarboxymuconate-semialdehyde decarboxylase activity // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0016831 // carboxy-lyase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:135596185-135659645 (+) // 98.38 // q21.3"]
["11737440_a_at",44.51522,39.05134,42.732845,49.739403,45.79761,49.75328,-0.020486832,-0.20941353,-0.07944012,0.13960361,0.020486832,0.14000607,0.33731955,0.041377045,-1.1512058,-0.20314574,1.1512058,"down","BMF",90427.0,"0006915 // apoptotic process // inferred from sequence or structural similarity /// 0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0008629 // induction of apoptosis by intracellular signals // traceable author statement /// 0008633 // activation of pro-apoptotic gene products // traceable author statement /// 0032464 // positive regulation of protein homooligomerization // inferred from sequence or structural similarity /// 0032464 // positive regulation of protein homooligomerization // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0090200 // positive regulation of release of cytochrome c from mitochondria // inferred from sequence or structural similarity /// 0090200 // positive regulation of release of cytochrome c from mitochondria // inferred from electronic annotation","0001669 // acrosomal vesicle // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0016459 // myosin complex // inferred from sequence or structural similarity /// 0016459 // myosin complex // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr15:40380093-40398649 (-) // 95.53 // q15.1"]
["11723103_x_at",54.98931,54.368134,59.201733,55.3516,64.751656,60.455666,-0.05798149,-0.07437134,0.048506737,-0.048507214,0.17778444,0.07874441,0.64640695,0.26960015,-1.0697615,-0.097289205,1.0697615,"down","GNB4",59345.0,"0006112 // energy reserve metabolic process // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0071377 // cellular response to glucagon stimulus // traceable author statement","0005886 // plasma membrane // traceable author statement","0004871 // signal transducer activity // inferred from electronic annotation","chr3:179113610-179169378 (-) // 82.48 // q26.33"]
["11746836_a_at",11.145005,9.539027,12.009661,11.628003,11.961298,11.289144,-0.039872408,-0.26435542,0.06792569,0.021333694,0.062104464,-0.021333694,0.7255764,0.37958097,-1.071379,-0.09946885,1.071379,"down","TMEFF2",23671.0,"","0005576 // extracellular region // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","","chr2:192813774-193059642 (-) // 97.2 // q32.3"]
["11759529_at",9.528696,8.837162,8.852902,8.1545515,8.775961,8.136905,0.113708735,0.0050127506,0.0075802803,-0.110964775,-0.005012989,-0.114090204,0.4236016,0.07900744,1.0858238,0.11878998,1.0858238,"up","ZC3H15",55854.0,"0019221 // cytokine-mediated signaling pathway // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:187350884-187374697 (+) // 95.33 // q32.1"]
["11725792_a_at",124.67352,118.69965,118.68471,120.03469,119.248566,129.0074,0.059442997,-0.011395931,-0.011577129,0.0047397614,-0.004740238,0.10874224,0.8512936,0.60812163,-1.0168386,-0.024090633,1.0168386,"down","MRE11A",4361.0,"0000019 // regulation of mitotic recombination // traceable author statement /// 0000075 // cell cycle checkpoint // inferred from electronic annotation /// 0000724 // double-strand break repair via homologous recombination // traceable author statement /// 0006259 // DNA metabolic process // inferred from electronic annotation /// 0006281 // DNA repair // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006302 // double-strand break repair // traceable author statement /// 0006302 // double-strand break repair // inferred from electronic annotation /// 0006303 // double-strand break repair via nonhomologous end joining // traceable author statement /// 0006310 // DNA recombination // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from direct assay /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007004 // telomere maintenance via telomerase // traceable author statement /// 0007062 // sister chromatid cohesion // inferred from mutant phenotype /// 0007126 // meiosis // inferred from electronic annotation /// 0007129 // synapsis // inferred from electronic annotation /// 0007131 // reciprocal meiotic recombination // traceable author statement /// 0007507 // heart development // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from electronic annotation /// 0031954 // positive regulation of protein autophosphorylation // inferred from direct assay /// 0032508 // DNA duplex unwinding // inferred from mutant phenotype /// 0032876 // negative regulation of DNA endoreduplication // inferred from mutant phenotype /// 0033674 // positive regulation of kinase activity // inferred from direct assay /// 0051276 // chromosome organization // inferred from electronic annotation /// 0090305 // nucleic acid phosphodiester bond hydrolysis // traceable author statement /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation","0000781 // chromosome, telomeric region // inferred from direct assay /// 0000790 // nuclear chromatin // inferred from electronic annotation /// 0000794 // condensed nuclear chromosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0030870 // Mre11 complex // inferred from direct assay /// 0030870 // Mre11 complex // non-traceable author statement /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0000014 // single-stranded DNA specific endodeoxyribonuclease activity // traceable author statement /// 0003677 // DNA binding // inferred from direct assay /// 0003690 // double-stranded DNA binding // traceable author statement /// 0004003 // ATP-dependent DNA helicase activity // inferred from mutant phenotype /// 0004518 // nuclease activity // traceable author statement /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004519 // endonuclease activity // inferred from electronic annotation /// 0004520 // endodeoxyribonuclease activity // traceable author statement /// 0004527 // exonuclease activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0008408 // 3'-5' exonuclease activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0030145 // manganese ion binding // inferred from electronic annotation","chr11:94150170-94227040 (-) // 92.53 // q21"]
["11757741_s_at",205.04059,216.10269,231.59337,220.4096,217.75478,224.93703,-0.09553623,-0.01972866,0.08014822,0.008741379,-0.008741379,0.038075447,0.8782479,0.6673265,-1.0170548,-0.02439741,1.0170548,"down","SOX4",6659.0,"0001501 // skeletal system development // inferred from sequence or structural similarity /// 0001501 // skeletal system development // inferred from electronic annotation /// 0001841 // neural tube formation // inferred from sequence or structural similarity /// 0001841 // neural tube formation // inferred from electronic annotation /// 0002328 // pro-B cell differentiation // inferred from sequence or structural similarity /// 0002328 // pro-B cell differentiation // inferred from electronic annotation /// 0003183 // mitral valve morphogenesis // inferred from sequence or structural similarity /// 0003183 // mitral valve morphogenesis // inferred from electronic annotation /// 0003211 // cardiac ventricle formation // inferred from sequence or structural similarity /// 0003211 // cardiac ventricle formation // inferred from electronic annotation /// 0003215 // cardiac right ventricle morphogenesis // inferred from sequence or structural similarity /// 0003215 // cardiac right ventricle morphogenesis // inferred from electronic annotation /// 0003289 // atrial septum primum morphogenesis // inferred from sequence or structural similarity /// 0003289 // atrial septum primum morphogenesis // inferred from electronic annotation /// 0003357 // noradrenergic neuron differentiation // inferred from sequence or structural similarity /// 0003357 // noradrenergic neuron differentiation // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // inferred from mutant phenotype /// 0007507 // heart development // inferred from sequence or structural similarity /// 0007507 // heart development // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0014009 // glial cell proliferation // inferred from sequence or structural similarity /// 0014009 // glial cell proliferation // inferred from electronic annotation /// 0021510 // spinal cord development // inferred from sequence or structural similarity /// 0021510 // spinal cord development // inferred from electronic annotation /// 0021522 // spinal cord motor neuron differentiation // inferred from sequence or structural similarity /// 0021522 // spinal cord motor neuron differentiation // inferred from electronic annotation /// 0021782 // glial cell development // inferred from sequence or structural similarity /// 0021782 // glial cell development // inferred from electronic annotation /// 0030177 // positive regulation of Wnt receptor signaling pathway // inferred from sequence or structural similarity /// 0030177 // positive regulation of Wnt receptor signaling pathway // inferred from electronic annotation /// 0030217 // T cell differentiation // inferred from sequence or structural similarity /// 0030217 // T cell differentiation // inferred from electronic annotation /// 0031018 // endocrine pancreas development // inferred from electronic annotation /// 0031397 // negative regulation of protein ubiquitination // inferred from mutant phenotype /// 0031647 // regulation of protein stability // inferred from mutant phenotype /// 0032024 // positive regulation of insulin secretion // inferred from sequence or structural similarity /// 0032024 // positive regulation of insulin secretion // inferred from electronic annotation /// 0035019 // somatic stem cell maintenance // inferred from electronic annotation /// 0035910 // ascending aorta morphogenesis // inferred from sequence or structural similarity /// 0035910 // ascending aorta morphogenesis // inferred from electronic annotation /// 0042593 // glucose homeostasis // inferred from sequence or structural similarity /// 0042593 // glucose homeostasis // inferred from electronic annotation /// 0042769 // DNA damage response, detection of DNA damage // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0045727 // positive regulation of translation // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046826 // negative regulation of protein export from nucleus // inferred from mutant phenotype /// 0048485 // sympathetic nervous system development // inferred from sequence or structural similarity /// 0048485 // sympathetic nervous system development // inferred from electronic annotation /// 0050821 // protein stabilization // inferred from mutant phenotype /// 0050821 // protein stabilization // inferred from electronic annotation /// 0060070 // canonical Wnt receptor signaling pathway // inferred from sequence or structural similarity /// 0060070 // canonical Wnt receptor signaling pathway // inferred from electronic annotation /// 0060174 // limb bud formation // inferred from sequence or structural similarity /// 0060174 // limb bud formation // inferred from electronic annotation /// 0060412 // ventricular septum morphogenesis // inferred from sequence or structural similarity /// 0060412 // ventricular septum morphogenesis // inferred from electronic annotation /// 0060548 // negative regulation of cell death // inferred from sequence or structural similarity /// 0060548 // negative regulation of cell death // inferred from electronic annotation /// 0060563 // neuroepithelial cell differentiation // inferred from sequence or structural similarity /// 0060563 // neuroepithelial cell differentiation // inferred from electronic annotation /// 0060993 // kidney morphogenesis // inferred from sequence or structural similarity /// 0060993 // kidney morphogenesis // inferred from electronic annotation /// 0071333 // cellular response to glucose stimulus // inferred from sequence or structural similarity /// 0071333 // cellular response to glucose stimulus // inferred from electronic annotation /// 0090263 // positive regulation of canonical Wnt receptor signaling pathway // inferred from sequence or structural similarity /// 0090263 // positive regulation of canonical Wnt receptor signaling pathway // inferred from electronic annotation /// 2000761 // positive regulation of N-terminal peptidyl-lysine acetylation // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay","0000976 // transcription regulatory region sequence-specific DNA binding // inferred from sequence or structural similarity /// 0000976 // transcription regulatory region sequence-specific DNA binding // inferred from electronic annotation /// 0001046 // core promoter sequence-specific DNA binding // inferred from direct assay /// 0001046 // core promoter sequence-specific DNA binding // inferred from electronic annotation /// 0001071 // nucleic acid binding transcription factor activity // inferred from mutant phenotype /// 0001071 // nucleic acid binding transcription factor activity // inferred from electronic annotation /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from direct assay /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from electronic annotation /// 0001105 // RNA polymerase II transcription coactivator activity // inferred from sequence or structural similarity /// 0001105 // RNA polymerase II transcription coactivator activity // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr6:21596716-21597392 (+) // 94.1 // p22.3"]
["11727551_a_at",13.364701,13.571122,13.283949,13.332426,12.943535,12.269623,0.006115675,0.028228283,-0.0026278496,0.0026276112,-0.04008031,-0.11722088,0.54563266,0.16171369,1.0440059,0.062129825,1.0440059,"up","ADAMTS10",81794.0,"0006508 // proteolysis // inferred from electronic annotation /// 0007229 // integrin-mediated signaling pathway // inferred from electronic annotation","0001527 // microfibril // inferred from direct assay /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from electronic annotation","0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:8645125-8673133 (-) // 97.65 // p13.2"]
["11721902_a_at",41.003674,36.234047,33.57117,38.386482,39.351364,36.52142,0.13108253,-0.047324657,-0.15744781,0.035927773,0.07174301,-0.035927773,0.85542005,0.61806524,-1.0341731,-0.048477728,1.0341731,"down","SERPINI1",5274.0,"0007417 // central nervous system development // traceable author statement /// 0007422 // peripheral nervous system development // traceable author statement /// 0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // not recorded /// 0030155 // regulation of cell adhesion // inferred from electronic annotation /// 0030162 // regulation of proteolysis // not recorded","0005576 // extracellular region // inferred from electronic annotation","0004867 // serine-type endopeptidase inhibitor activity // not recorded /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0004867 // serine-type endopeptidase inhibitor activity // traceable author statement /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation","chr3:167453510-167543560 (+) // 99.62 // q26.1"]
["11763571_at",15.32501,14.198661,12.166535,15.091938,13.131893,15.144509,0.06612158,-0.044011593,-0.2668481,0.044011593,-0.15669155,0.049028397,0.86461216,0.63891506,-1.0427275,-0.06036214,1.0427275,"down","SLC1A7",6512.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006835 // dicarboxylic acid transport // traceable author statement /// 0006835 // dicarboxylic acid transport // inferred from electronic annotation /// 0015813 // L-glutamate transport // traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0005313 // L-glutamate transmembrane transporter activity // traceable author statement /// 0015293 // symporter activity // inferred from electronic annotation /// 0017153 // sodium:dicarboxylate symporter activity // inferred from electronic annotation","chr1:53580247-53584281 (+) // 83.97 // p32.3"]
["11746180_a_at",5124.9365,5093.7896,5323.416,5432.538,5745.3125,5482.434,-0.0694561,-0.07824993,-0.014636993,0.014636993,0.09539604,0.027827263,0.31707066,0.03516374,-1.0718238,-0.1000678,1.0718238,"down","CD55",1604.0,"0006958 // complement activation, classical pathway // inferred from electronic annotation /// 0007204 // elevation of cytosolic calcium ion concentration // inferred from direct assay /// 0030449 // regulation of complement activation // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation /// 0045730 // respiratory burst // non-traceable author statement","0005576 // extracellular region // traceable author statement /// 0005625 // soluble fraction // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0031225 // anchored to membrane // inferred from electronic annotation /// 0045121 // membrane raft // inferred from direct assay","0004872 // receptor activity // inferred from electronic annotation","chr1:207495077-207533846 (+) // 96.56 // q32.2"]
["11759203_a_at",54.874275,47.876648,59.630768,55.511635,57.579113,58.557453,-0.04303837,-0.23984575,0.07688856,-0.026377678,0.026377678,0.05068493,0.75181884,0.41909727,-1.0610996,-0.08556014,1.0610996,"down","ZNF223 /// ZNF284","342909 /// 7766","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:44556163-44572142 (+) // 79.7 // q13.31"]
["11736723_a_at",147.20735,148.20734,151.20737,157.99413,147.6414,151.20737,-0.02422285,-0.014455318,0.014455318,0.07779789,-0.019975662,0.014455318,0.71133596,0.356635,-1.0225468,-0.032166827,1.0225468,"down","PDLIM7",9260.0,"0001503 // ossification // inferred from electronic annotation /// 0006898 // receptor-mediated endocytosis // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045669 // positive regulation of osteoblast differentiation // inferred from electronic annotation","0001725 // stress fiber // inferred from electronic annotation /// 0001726 // ruffle // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0030054 // cell junction // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr5:176910394-176924602 (-) // 100.0 // q35.3"]
["11736662_a_at",5.657364,5.8541036,5.103295,5.6460605,5.2369695,5.6655383,0.0014426708,0.050760984,-0.14725828,-0.0014426708,-0.10995507,0.003525734,0.9863795,0.9543194,1.0029658,0.0042724237,1.0029658,"up","CADPS2",93664.0,"0006810 // transport // inferred from electronic annotation /// 0006887 // exocytosis // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016082 // synaptic vesicle priming // inferred from electronic annotation /// 0045921 // positive regulation of exocytosis // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0042734 // presynaptic membrane // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0005543 // phospholipid binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:121958478-122526554 (-) // 97.07 // q31.32"]
["11725019_a_at",204.84645,201.17305,192.93779,217.94357,206.5233,219.50218,-0.0058808327,-0.031986713,-0.09228802,0.0835309,0.0058808327,0.09381151,0.36123997,0.05047824,-1.0750916,-0.104459584,1.0750916,"down","MST1R",4486.0,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0006928 // cellular component movement // traceable author statement /// 0006952 // defense response // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007338 // single fertilization // traceable author statement /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0009615 // response to virus // inferred from direct assay /// 0009615 // response to virus // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0038145 // macrophage colony-stimulating factor signaling pathway // traceable author statement /// 0043406 // positive regulation of MAP kinase activity // inferred from direct assay /// 0045087 // innate immune response // inferred from electronic annotation /// 0051897 // positive regulation of protein kinase B signaling cascade // inferred from direct assay","0001725 // stress fiber // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005011 // macrophage colony-stimulating factor receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction","chr3:49924437-49941306 (-) // 96.95 // p21.31"]
["11727803_at",739.74866,714.2794,713.5413,759.45715,767.7078,742.0388,-0.0022296906,-0.052776337,-0.054267883,0.03570366,0.05129242,0.0022296906,0.338441,0.04183664,-1.0469311,-0.066166565,1.0469311,"down","GJA9-MYCBP /// MYCBP","100527950 /// 26292","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from expression pattern","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay","0003713 // transcription coactivator activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction","chr1:39328636-39340206 (-) // 88.2 // p34.3"]
["11740937_x_at",66.54068,64.19491,64.74282,61.14413,61.040707,60.823887,0.086900234,0.035122395,0.047384262,-0.035122395,-0.03756523,-0.042698383,0.14187962,0.0038456249,1.0680143,0.09493092,1.0680143,"up","LIAS",11019.0,"0001843 // neural tube closure // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from sequence or structural similarity /// 0006954 // inflammatory response // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from sequence or structural similarity /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0009107 // lipoate biosynthetic process // inferred from sequence or structural similarity /// 0009107 // lipoate biosynthetic process // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from sequence or structural similarity /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation","0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005739 // mitochondrion // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016992 // lipoate synthase activity // inferred from sequence or structural similarity /// 0016992 // lipoate synthase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation /// 0051539 // 4 iron, 4 sulfur cluster binding // inferred from electronic annotation","chr4:39460664-39479269 (+) // 80.02 // p14"]
["11740966_a_at",12.3178215,12.602729,12.55739,13.999896,15.200452,14.959778,-0.10882926,-0.075840235,-0.08103967,0.07584,0.19453788,0.17151237,0.13441989,0.0033472308,-1.1776137,-0.2358664,1.1776137,"down","LOC391322",391322.0,"","","","chr22:24373110-24376211 (+) // 93.91 // q11.23"]
["11732166_a_at",35.761776,39.449814,34.428677,39.157322,36.269405,36.094975,-0.016857147,0.124742985,-0.07166481,0.11400652,0.0034775734,-0.0034775734,0.90422934,0.72912997,-1.0181347,-0.025928462,1.0181347,"down","LMF1",64788.0,"0006888 // ER to Golgi vesicle-mediated transport // inferred from electronic annotation /// 0009306 // protein secretion // inferred from electronic annotation /// 0033578 // protein glycosylation in Golgi // inferred from electronic annotation /// 0034382 // chylomicron remnant clearance // inferred from electronic annotation /// 0051006 // positive regulation of lipoprotein lipase activity // inferred from electronic annotation /// 0051604 // protein maturation // inferred from electronic annotation /// 0090181 // regulation of cholesterol metabolic process // inferred from electronic annotation /// 0090207 // regulation of triglyceride metabolic process // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr16:903629-1020999 (-) // 98.26 // p13.3"]
["11715128_s_at",29.616114,30.10222,26.084312,29.4448,26.736095,31.059702,0.004184723,0.02767229,-0.17901516,-0.004184723,-0.14340878,0.07284641,0.9346873,0.80384123,-1.0168712,-0.024136974,1.0168712,"down","PCDHGB5",56101.0,"0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr5:140777694-140780151 (+) // 100.0 // q31.3"]
["11728841_a_at",16.89398,16.033653,19.716812,18.062967,17.328194,18.877745,-0.06656885,-0.14197493,0.15634823,0.029956818,-0.029956818,0.09360838,0.8653164,0.6406608,-1.0342617,-0.04860128,1.0342617,"down","PLEKHA5",54477.0,"","","0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0005545 // 1-phosphatidylinositol binding // non-traceable author statement","chr12:19282628-19529334 (+) // 96.91 // p12.3"]
["11724615_at",28.410212,31.022173,33.505104,31.46732,29.840513,26.522556,-0.09887648,0.028013706,0.13909483,0.04856825,-0.028013706,-0.19806623,0.77623856,0.4594886,1.0584217,0.08191459,1.0584217,"up","LIMK1",3984.0,"0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // non-traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007266 // Rho protein signal transduction // traceable author statement /// 0007399 // nervous system development // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // traceable author statement /// 0032233 // positive regulation of actin filament bundle assembly // inferred from direct assay /// 0045773 // positive regulation of axon extension // inferred from sequence or structural similarity /// 0051444 // negative regulation of ubiquitin-protein ligase activity // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0043005 // neuron projection // inferred from sequence or structural similarity","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // non-traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0031072 // heat shock protein binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:73498155-73536855 (+) // 95.33 // q11.23"]
["11723313_s_at",579.7829,559.03796,586.99817,533.7582,565.9831,556.40344,0.043660164,-0.008906364,0.06150341,-0.07566643,0.008906364,-0.015721321,0.5234042,0.14367521,1.042162,0.059579473,1.042162,"up","PXMP2",5827.0,"","0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005777 // peroxisome // inferred from electronic annotation /// 0005778 // peroxisomal membrane // inferred from direct assay /// 0005778 // peroxisomal membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr12:133264125-133281571 (+) // 97.22 // q24.33"]
["11726087_at",9.577785,9.577785,10.783695,9.480033,9.401822,9.58792,0.0,0.0,0.1710875,-0.01480031,-0.026751757,0.0015256405,0.662073,0.28899598,1.0499868,0.07037124,1.0499868,"up","HSPB3",8988.0,"0006950 // response to stress // inferred from electronic annotation /// 0006986 // response to unfolded protein // traceable author statement /// 0008219 // cell death // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","","chr5:53751430-53752207 (+) // 98.73 // q11.2"]
["11723247_a_at",16.0302,15.651193,14.946399,17.837757,17.369066,15.818407,0.009593964,-0.024925709,-0.091400385,0.16373587,0.12532187,-0.009593964,0.45785344,0.09981155,-1.0933323,-0.12873194,1.0933323,"down","SFRP1",6422.0,"0001649 // osteoblast differentiation // inferred from expression pattern /// 0001649 // osteoblast differentiation // inferred from electronic annotation /// 0001657 // ureteric bud development // inferred from electronic annotation /// 0001756 // somitogenesis // inferred from electronic annotation /// 0001843 // neural tube closure // inferred from electronic annotation /// 0001944 // vasculature development // not recorded /// 0001954 // positive regulation of cell-matrix adhesion // inferred from sequence or structural similarity /// 0002244 // hemopoietic progenitor cell differentiation // inferred from direct assay /// 0006309 // apoptotic DNA fragmentation // inferred from direct assay /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007420 // brain development // not recorded /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0008406 // gonad development // not recorded /// 0008584 // male gonad development // inferred from electronic annotation /// 0008585 // female gonad development // inferred from electronic annotation /// 0009267 // cellular response to starvation // inferred from expression pattern /// 0009790 // embryo development // not recorded /// 0009950 // dorsal/ventral axis specification // inferred from direct assay /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0010564 // regulation of cell cycle process // inferred from mutant phenotype /// 0010629 // negative regulation of gene expression // inferred from direct assay /// 0010629 // negative regulation of gene expression // inferred from electronic annotation /// 0010719 // negative regulation of epithelial to mesenchymal transition // inferred from direct assay /// 0014034 // neural crest cell fate commitment // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from direct assay /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0021915 // neural tube development // inferred from electronic annotation /// 0022601 // menstrual cycle phase // inferred from expression pattern /// 0030097 // hemopoiesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030177 // positive regulation of Wnt receptor signaling pathway // inferred from direct assay /// 0030178 // negative regulation of Wnt receptor signaling pathway // inferred from direct assay /// 0030178 // negative regulation of Wnt receptor signaling pathway // inferred from mutant phenotype /// 0030178 // negative regulation of Wnt receptor signaling pathway // inferred from electronic annotation /// 0030278 // regulation of ossification // inferred from electronic annotation /// 0030279 // negative regulation of ossification // inferred from direct assay /// 0030279 // negative regulation of ossification // inferred from mutant phenotype /// 0030279 // negative regulation of ossification // inferred from electronic annotation /// 0030307 // positive regulation of cell growth // inferred from direct assay /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0030336 // negative regulation of cell migration // inferred from direct assay /// 0030514 // negative regulation of BMP signaling pathway // inferred from electronic annotation /// 0032855 // positive regulation of Rac GTPase activity // inferred from sequence or structural similarity /// 0033689 // negative regulation of osteoblast proliferation // inferred from mutant phenotype /// 0033689 // negative regulation of osteoblast proliferation // inferred from electronic annotation /// 0035019 // somatic stem cell maintenance // inferred from electronic annotation /// 0042493 // response to drug // inferred from direct assay /// 0042493 // response to drug // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0044344 // cellular response to fibroblast growth factor stimulus // inferred from direct assay /// 0044345 // stromal-epithelial cell signaling involved in prostate gland development // inferred from electronic annotation /// 0045578 // negative regulation of B cell differentiation // inferred from mutant phenotype /// 0045578 // negative regulation of B cell differentiation // inferred from electronic annotation /// 0045600 // positive regulation of fat cell differentiation // inferred from direct assay /// 0045668 // negative regulation of osteoblast differentiation // inferred from electronic annotation /// 0045671 // negative regulation of osteoclast differentiation // inferred from electronic annotation /// 0045765 // regulation of angiogenesis // inferred from sequence or structural similarity /// 0045880 // positive regulation of smoothened signaling pathway // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0046546 // development of primary male sexual characteristics // inferred from electronic annotation /// 0046676 // negative regulation of insulin secretion // inferred from direct assay /// 0046851 // negative regulation of bone remodeling // inferred from mutant phenotype /// 0048147 // negative regulation of fibroblast proliferation // inferred from direct assay /// 0050679 // positive regulation of epithelial cell proliferation // inferred from mutant phenotype /// 0050680 // negative regulation of epithelial cell proliferation // inferred from direct assay /// 0050732 // negative regulation of peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0051496 // positive regulation of stress fiber assembly // inferred from sequence or structural similarity /// 0051894 // positive regulation of focal adhesion assembly // inferred from sequence or structural similarity /// 0060070 // canonical Wnt receptor signaling pathway // inferred from direct assay /// 0060071 // Wnt receptor signaling pathway, planar cell polarity pathway // inferred from electronic annotation /// 0060218 // hemopoietic stem cell differentiation // inferred from direct assay /// 0060346 // bone trabecula formation // inferred from electronic annotation /// 0060527 // prostate epithelial cord arborization involved in prostate glandular acinus morphogenesis // inferred from electronic annotation /// 0060687 // regulation of branching involved in prostate gland morphogenesis // inferred from electronic annotation /// 0060766 // negative regulation of androgen receptor signaling pathway // inferred from direct assay /// 0071305 // cellular response to vitamin D // inferred from expression pattern /// 0071347 // cellular response to interleukin-1 // inferred from expression pattern /// 0071356 // cellular response to tumor necrosis factor // inferred from direct assay /// 0071363 // cellular response to growth factor stimulus // inferred from direct assay /// 0071380 // cellular response to prostaglandin E stimulus // inferred from expression pattern /// 0071380 // cellular response to prostaglandin E stimulus // inferred from electronic annotation /// 0071391 // cellular response to estrogen stimulus // inferred from direct assay /// 0071391 // cellular response to estrogen stimulus // inferred from electronic annotation /// 0071392 // cellular response to estradiol stimulus // inferred from expression pattern /// 0071456 // cellular response to hypoxia // inferred from expression pattern /// 0071481 // cellular response to X-ray // inferred from electronic annotation /// 0071504 // cellular response to heparin // inferred from direct assay /// 0071560 // cellular response to transforming growth factor beta stimulus // inferred from expression pattern /// 0071773 // cellular response to BMP stimulus // inferred from expression pattern /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from direct assay /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from mutant phenotype /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from electronic annotation /// 0090263 // positive regulation of canonical Wnt receptor signaling pathway // inferred from direct assay /// 2000052 // positive regulation of non-canonical Wnt receptor signaling pathway // inferred from direct assay /// 2000054 // negative regulation of Wnt receptor signaling pathway involved in dorsal/ventral axis specification // inferred from direct assay /// 2000080 // negative regulation of canonical Wnt receptor signaling pathway involved in controlling type B pancreatic cell proliferation // inferred from direct assay /// 2000117 // negative regulation of cysteine-type endopeptidase activity // inferred from mutant phenotype /// 2000270 // negative regulation of fibroblast apoptotic process // inferred from direct assay /// 2000271 // positive regulation of fibroblast apoptotic process // inferred from direct assay","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from direct assay /// 0005615 // extracellular space // inferred from direct assay /// 0005622 // intracellular // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005886 // plasma membrane // not recorded /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0009986 // cell surface // inferred from direct assay /// 0031012 // extracellular matrix // inferred from direct assay /// 0042995 // cell projection // not recorded","0004197 // cysteine-type endopeptidase activity // inferred from mutant phenotype /// 0005109 // frizzled binding // inferred from physical interaction /// 0008144 // drug binding // inferred from direct assay /// 0008201 // heparin binding // inferred from direct assay /// 0017147 // Wnt-protein binding // inferred from physical interaction /// 0017147 // Wnt-protein binding // inferred from electronic annotation /// 0030165 // PDZ domain binding // not recorded /// 0042802 // identical protein binding // inferred from physical interaction /// 0042813 // Wnt-activated receptor activity // not recorded","chr8:41119477-41166990 (-) // 97.65 // p11.21"]
["11745412_s_at",20.871742,18.74411,22.623678,20.266003,24.596365,22.24008,-0.045805454,-0.20091915,0.07047701,-0.08829498,0.19108868,0.045805454,0.73306865,0.3908364,-1.077944,-0.10828228,1.077944,"down","LOC441178",441178.0,"","","","chr6:168083767-168084736 (-) // 99.38 // q27"]
["11757242_x_at",45.122414,45.892136,47.447502,47.230892,41.42837,47.793972,-0.045144558,-0.02074194,0.027343273,0.02074194,-0.16836977,0.03783989,0.91333413,0.74949193,1.0165973,0.023748262,1.0165973,"up","LOC339240",339240.0,"","0005576 // extracellular region // inferred from electronic annotation","","chr17:18325494-18328647 (+) // 80.24 // p11.2 /// chr17:20422385-20425541 (-) // 82.71 // p11.2 /// chr17:16750714-16753867 (-) // 73.04 // p11.2"]
["11744034_a_at",884.8409,866.0042,912.40735,907.0156,889.8654,892.481,-0.010286331,-0.041330338,0.033973694,0.02542305,-0.002117157,0.002117157,0.834888,0.57378685,-1.01,-0.0143552795,1.01,"down","VASP",7408.0,"0001843 // neural tube closure // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007411 // axon guidance // inferred from electronic annotation /// 0008154 // actin polymerization or depolymerization // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0034329 // cell junction assembly // traceable author statement /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0051289 // protein homotetramerization // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0005925 // focal adhesion // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030175 // filopodium // inferred from electronic annotation /// 0031258 // lamellipodium membrane // inferred from electronic annotation /// 0031527 // filopodium membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005522 // profilin binding // inferred from physical interaction /// 0017124 // SH3 domain binding // inferred from electronic annotation","chr19:46010694-46030241 (+) // 89.99 // q13.32"]
["11741280_s_at",5.420347,5.091829,5.0464487,5.4458556,6.1155715,5.8407707,-0.003386736,-0.093588114,-0.10650349,0.003386736,0.17071533,0.10438681,0.36467722,0.051495925,-1.1177951,-0.16065577,1.1177951,"down","CASC1",55259.0,"","0005881 // cytoplasmic microtubule // inferred from electronic annotation","0008017 // microtubule binding // inferred from electronic annotation /// 0048487 // beta-tubulin binding // inferred from electronic annotation","chr12:25261223-25348094 (-) // 99.41 // p12.1"]
["11757313_s_at",233.61029,235.87408,239.54436,226.27611,224.1545,219.94809,0.023010254,0.036923885,0.059199333,-0.023009777,-0.036600113,-0.06393051,0.17673707,0.0071955095,1.0576713,0.08089135,1.0576713,"up","VAT1",10493.0,"0010637 // negative regulation of mitochondrial fusion // inferred from mutant phenotype /// 0016049 // cell growth // non-traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005634 // nucleus // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation","chr17:41166623-41167974 (-) // 92.54 // q21.31"]
["11727264_at",96.63244,99.41678,91.58145,108.211174,86.37891,96.42583,0.0015435219,0.04252577,-0.075908184,0.16481352,-0.16028452,-0.0015439987,0.9726067,0.91324776,-1.0080785,-0.011607924,1.0080785,"down","LRRC8E",80131.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr19:7953389-7966901 (+) // 85.61 // p13.2"]
["11751320_a_at",31.49277,29.748182,29.800812,31.992893,29.654549,31.423523,0.041422367,-0.040796757,-0.03824663,0.064153194,-0.04534483,0.03824663,0.7982337,0.50053024,-1.0221158,-0.031558692,1.0221158,"down","POLL",27343.0,"0006260 // DNA replication // non-traceable author statement /// 0006260 // DNA replication // inferred from electronic annotation /// 0006281 // DNA repair // inferred from electronic annotation /// 0006289 // nucleotide-excision repair // inferred from direct assay /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0016446 // somatic hypermutation of immunoglobulin genes // non-traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // non-traceable author statement /// 0003824 // catalytic activity // inferred from electronic annotation /// 0003887 // DNA-directed DNA polymerase activity // inferred from electronic annotation /// 0003887 // DNA-directed DNA polymerase activity // non-traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016779 // nucleotidyltransferase activity // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr10:103338990-103348006 (-) // 99.86 // q24.32"]
["11722091_a_at",90.39738,87.55374,93.895325,99.45168,90.04077,96.12439,-0.027386189,-0.07349825,0.027386189,0.110328674,-0.033088684,0.061235905,0.6228675,0.23966433,-1.0501956,-0.07065802,1.0501956,"down","PRR5",55615.0,"0007049 // cell cycle // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0030036 // actin cytoskeleton organization // inferred from direct assay /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0032321 // positive regulation of Rho GTPase activity // inferred from direct assay /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from direct assay /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005096 // GTPase activator activity // inferred from direct assay /// 0005100 // Rho GTPase activator activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction","chr22:45072687-45133561 (+) // 97.79 // q13.31"]
["11718474_a_at",997.7918,982.07513,981.3808,1066.2081,1047.4829,1056.6029,-0.03505802,-0.05796337,-0.058983803,0.060620308,0.03505802,0.047564507,0.08459432,7.889781E-4,-1.0705974,-0.09841607,1.0705974,"down","IDH1",3417.0,"0006097 // glyoxylate cycle // inferred from electronic annotation /// 0006099 // tricarboxylic acid cycle // inferred from electronic annotation /// 0006102 // isocitrate metabolic process // inferred from direct assay /// 0006102 // isocitrate metabolic process // inferred from electronic annotation /// 0006103 // 2-oxoglutarate metabolic process // inferred from direct assay /// 0006103 // 2-oxoglutarate metabolic process // traceable author statement /// 0006740 // NADPH regeneration // traceable author statement /// 0006749 // glutathione metabolic process // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005777 // peroxisome // inferred from direct assay /// 0005777 // peroxisome // inferred from electronic annotation /// 0005782 // peroxisomal matrix // traceable author statement /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation","0000287 // magnesium ion binding // inferred from direct assay /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0004450 // isocitrate dehydrogenase (NADP+) activity // not recorded /// 0004450 // isocitrate dehydrogenase (NADP+) activity // inferred from direct assay /// 0004450 // isocitrate dehydrogenase (NADP+) activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from physical interaction /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016616 // oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051287 // NAD binding // inferred from electronic annotation","chr2:209100952-209120522 (-) // 92.68 // q34"]
["11745815_x_at",205.03645,193.1064,195.5607,167.11174,185.22469,176.61758,0.11654425,0.030059814,0.04828024,-0.17852306,-0.030059814,-0.0987072,0.2956209,0.029217688,1.1230261,0.1673915,1.1230261,"up","C16orf5",29965.0,"0006915 // apoptotic process // inferred from genetic interaction /// 0006917 // induction of apoptosis // inferred from direct assay /// 0033209 // tumor necrosis factor-mediated signaling pathway // inferred from genetic interaction /// 0042771 // DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement","","chr16:4560706-4565107 (-) // 95.22 // p13.3"]
["11717432_a_at",690.47076,649.3741,693.06635,655.2007,716.87396,629.11926,0.03782177,-0.05070877,0.043234825,-0.03782177,0.09196091,-0.09642506,0.9012603,0.7221647,1.0169235,0.02421122,1.0169235,"up","ECHDC1",55862.0,"0008152 // metabolic process // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004492 // methylmalonyl-CoA decarboxylase activity // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0016831 // carboxy-lyase activity // inferred from sequence or structural similarity /// 0016831 // carboxy-lyase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation","chr6:127609856-127665037 (-) // 98.5 // q22.33"]
["11720731_a_at",406.80344,406.7252,398.42374,408.54434,417.48062,433.99158,-0.003080368,-0.0033578873,-0.03310871,0.003080368,0.03429699,0.09025478,0.4781662,0.11152024,-1.0393823,-0.05572645,1.0393823,"down","SUMF1",285362.0,"0055114 // oxidation-reduction process // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // inferred from electronic annotation","0016491 // oxidoreductase activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:4402829-4508954 (-) // 90.13 // p26.1"]
["11741989_a_at",16.42686,19.406534,16.59109,19.317465,18.251322,18.47114,-0.16058016,0.07990551,-0.14622831,0.07326889,-0.008635998,0.008635998,0.6616782,0.28824744,-1.071816,-0.100057214,1.071816,"down","P2RX2",22953.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // not recorded /// 0010524 // positive regulation of calcium ion transport into cytosol // non-traceable author statement /// 0035590 // purinergic nucleotide receptor signaling pathway // not recorded /// 0035590 // purinergic nucleotide receptor signaling pathway // non-traceable author statement /// 0050850 // positive regulation of calcium-mediated signaling // non-traceable author statement /// 0051260 // protein homooligomerization // inferred from physical interaction","0016020 // membrane // not recorded /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0001614 // purinergic nucleotide receptor activity // not recorded /// 0001614 // purinergic nucleotide receptor activity // non-traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0004931 // extracellular ATP-gated cation channel activity // not recorded /// 0004931 // extracellular ATP-gated cation channel activity // non-traceable author statement /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005524 // ATP binding // non-traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0015276 // ligand-gated ion channel activity // traceable author statement /// 0042802 // identical protein binding // inferred from physical interaction","chr12:133195402-133198972 (+) // 96.32 // q24.33"]
["11741321_a_at",32.094376,36.870995,35.803585,37.287365,36.17471,34.99987,-0.16522217,0.03494358,-0.0074386597,0.051144123,0.0074386597,-0.04019308,0.78703237,0.47682616,-1.0367267,-0.05203564,1.0367267,"down","CREM",1390.0,"0006006 // glucose metabolic process // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006687 // glycosphingolipid metabolic process // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0042752 // regulation of circadian rhythm // inferred from electronic annotation /// 0048384 // retinoic acid receptor signaling pathway // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008140 // cAMP response element binding protein binding // non-traceable author statement /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation","chr10:35484829-35501885 (+) // 99.52 // p11.21"]
["11753889_a_at",119.780495,131.20734,118.0423,126.97792,143.74495,141.83238,-0.10781956,0.023635387,-0.12890911,-0.02363491,0.15529871,0.1359744,0.45296493,0.096645355,-1.117476,-0.16024382,1.117476,"down","STAT6",6778.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0002296 // T-helper 1 cell lineage commitment // inferred from electronic annotation /// 0002829 // negative regulation of type 2 immune response // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // inferred from electronic annotation /// 0034097 // response to cytokine stimulus // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048295 // positive regulation of isotype switching to IgE isotypes // inferred from electronic annotation","0000790 // nuclear chromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr12:57501945-57502061 (-) // 99.15 // q13.3"]
["11735141_at",9.66007,9.2136345,8.697882,8.999182,9.627121,8.553896,0.08525157,0.016988277,-0.06611776,-0.016988277,0.08032274,-0.090200186,0.9206134,0.7662795,1.0146596,0.020995872,1.0146596,"up","SORCS3",22986.0,"0007218 // neuropeptide signaling pathway // non-traceable author statement /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0008188 // neuropeptide receptor activity // non-traceable author statement","chr10:106400858-107024999 (+) // 99.71 // q25.1"]
["11756090_s_at",253.17877,249.33502,267.95758,266.34824,248.36974,262.22272,-0.025318146,-0.04738903,0.05653,0.047839165,-0.05298567,0.025318146,0.9319337,0.79650664,-1.0084337,-0.012116236,1.0084337,"down","ZHX1",11244.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003714 // transcription corepressor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from direct assay","chr14:63763014-63764134 (+) // 49.18 // q23.2"]
["11740919_a_at",14.225783,17.729393,15.247955,15.149986,14.913152,15.333208,-0.09545803,0.22217703,0.0046494007,-0.004649639,-0.027380943,0.012693405,0.85790783,0.623068,1.0354337,0.050235108,1.0354337,"up","RSPO1",284654.0,"0002090 // regulation of receptor internalization // inferred from direct assay /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0030177 // positive regulation of Wnt receptor signaling pathway // inferred from direct assay /// 0050896 // response to stimulus // inferred from electronic annotation /// 0060070 // canonical Wnt receptor signaling pathway // inferred from electronic annotation /// 0090263 // positive regulation of canonical Wnt receptor signaling pathway // inferred from direct assay","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0005102 // receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008201 // heparin binding // inferred from electronic annotation","chr1:38076950-38100491 (-) // 84.99 // p34.3"]
["11730501_a_at",38.799023,32.978268,39.493023,55.270084,47.986244,51.541515,-0.16608906,-0.40059376,-0.14051151,0.34438944,0.14051151,0.24362564,0.1900797,0.009222892,-1.3933654,-0.47857362,1.3933654,"down","CACNA2D3",55799.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0051925 // regulation of calcium ion transport via voltage-gated calcium channel activity // inferred from electronic annotation /// 0070588 // calcium ion transmembrane transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005245 // voltage-gated calcium channel activity // inferred from electronic annotation /// 0005262 // calcium channel activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:54156650-55108582 (+) // 97.56 // p21.1"]
["11743248_at",25.645115,27.26807,25.218678,29.894333,25.501879,27.363626,-0.044264317,0.044264317,-0.068455696,0.17692375,-0.0523448,0.04931116,0.7000338,0.34007514,-1.0575911,-0.080781914,1.0575911,"down","ONECUT3",390874.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0031018 // endocrine pancreas development // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr19:1753661-1775602 (+) // 63.32 // p13.3"]
["11761537_at",11.353502,11.025433,11.160199,11.412215,10.31998,12.47016,0.012387514,-0.029914856,-0.012387276,0.019828796,-0.1253097,0.14772987,0.92548126,0.7781597,-1.0168132,-0.024054606,1.0168132,"down","TM2D3",80213.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr15:102173275-102192579 (-) // 53.12 // q26.3"]
["11745685_a_at",19.755331,23.501606,20.557192,22.85427,19.94642,21.509283,-0.09005928,0.16045809,-0.0326581,0.12016249,-0.0761714,0.0326581,0.96650976,0.89767486,-1.0090303,-0.012969557,1.0090303,"down","SCLT1",132320.0,"0045162 // clustering of voltage-gated sodium channels // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0045111 // intermediate filament cytoskeleton // inferred from direct assay","0017080 // sodium channel regulator activity // inferred from electronic annotation","chr4:129805500-130014567 (-) // 99.93 // q28.2"]
["11764008_at",8.230628,9.160966,8.320455,8.840463,10.038386,7.8923736,-0.05938983,0.095107555,-0.043729782,0.043729782,0.22706318,-0.11993289,0.87488365,0.6598765,-1.0373893,-0.052957363,1.0373893,"down","","","","","","chr9:121450030-121468238 (-) // 43.26 // q33.1"]
["11731749_at",24.817707,24.9792,24.97773,26.348228,25.174723,26.638575,-0.014981747,-0.0056242943,-0.0057091713,0.07135439,0.0056242943,0.087165356,0.39669,0.06511515,-1.044988,-0.06348643,1.044988,"down","SNX32",254122.0,"0006810 // transport // inferred from electronic annotation /// 0007154 // cell communication // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","","0035091 // phosphatidylinositol binding // inferred from electronic annotation","chr11:65601409-65621172 (+) // 95.15 // q13.1"]
["11719543_a_at",50.01107,50.249645,60.2976,48.823868,64.20736,54.544037,-0.06602001,-0.059154034,0.2038331,-0.10068083,0.29447126,0.059154034,0.8959804,0.7093836,-1.0410903,-0.05809514,1.0410903,"down","C3orf18",51161.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr3:50595461-50605199 (-) // 95.98 // p21.31"]
["11756854_a_at",115.78765,112.76674,108.31455,111.369514,111.623566,112.958626,0.045489788,0.007349968,-0.05076456,-0.01063776,-0.007349968,0.009802818,0.97181576,0.9108696,1.0023735,0.0034201173,1.0023735,"up","EHBP1",23301.0,"","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","","chr2:63192096-63272798 (+) // 100.0 // p15"]
["11749575_at",24.059923,23.323719,23.150942,24.76813,23.758575,23.757208,0.018225193,-0.026608944,-0.037335873,0.060078144,4.1484833E-5,-4.1484833E-5,0.63149387,0.25072142,-1.0247457,-0.03526594,1.0247457,"down","LOC100287329",1.00287329E8,"","","","chr6:31527069-31540480 (-) // 96.53 // p21.33"]
["11717457_a_at",200.00931,197.9622,212.32033,181.86948,194.78299,184.43985,0.026520729,0.011678696,0.11269665,-0.11064291,-0.011678696,-0.09039545,0.3599548,0.049893375,1.0876424,0.12120434,1.0876424,"up","NLGN2",57555.0,"0007155 // cell adhesion // inferred from electronic annotation /// 0007158 // neuron cell-cell adhesion // inferred from sequence or structural similarity /// 0007416 // synapse assembly // not recorded /// 0007416 // synapse assembly // inferred from sequence or structural similarity /// 0007416 // synapse assembly // non-traceable author statement /// 0016337 // cell-cell adhesion // non-traceable author statement /// 0032230 // positive regulation of synaptic transmission, GABAergic // inferred from sequence or structural similarity /// 0035418 // protein localization to synapse // inferred from sequence or structural similarity /// 0045217 // cell-cell junction maintenance // non-traceable author statement /// 0051965 // positive regulation of synapse assembly // inferred from sequence or structural similarity /// 0051968 // positive regulation of synaptic transmission, glutamatergic // inferred from sequence or structural similarity /// 0072553 // terminal button organization // inferred from sequence or structural similarity /// 0097104 // postsynaptic membrane assembly // inferred from sequence or structural similarity /// 0097105 // presynaptic membrane assembly // inferred from sequence or structural similarity /// 0097116 // gephyrin clustering // inferred from sequence or structural similarity /// 0097119 // postsynaptic density protein 95 clustering // inferred from sequence or structural similarity /// 0097151 // positive regulation of inhibitory postsynaptic membrane potential // inferred from sequence or structural similarity /// 2000311 // regulation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor activity // inferred from sequence or structural similarity /// 2000463 // positive regulation of excitatory postsynaptic membrane potential // inferred from sequence or structural similarity","0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // not recorded /// 0005887 // integral to plasma membrane // inferred from sequence or structural similarity /// 0009986 // cell surface // not recorded /// 0009986 // cell surface // inferred from sequence or structural similarity /// 0016020 // membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0042734 // presynaptic membrane // inferred from electronic annotation /// 0045202 // synapse // not recorded /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // non-traceable author statement /// 0045211 // postsynaptic membrane // inferred from electronic annotation /// 0060077 // inhibitory synapse // inferred from sequence or structural similarity","0004091 // carboxylesterase activity // not recorded /// 0004872 // receptor activity // not recorded /// 0042043 // neurexin family protein binding // not recorded /// 0042043 // neurexin family protein binding // inferred from sequence or structural similarity /// 0042043 // neurexin family protein binding // non-traceable author statement /// 0050839 // cell adhesion molecule binding // inferred from sequence or structural similarity","chr17:7311501-7323179 (+) // 94.41 // p13.1"]
["11735338_at",28.813745,26.494238,26.42625,23.373442,25.35469,24.154861,0.15464497,0.033566475,0.029859543,-0.14724207,-0.029859543,-0.09979868,0.3215142,0.036411587,1.1211586,0.16499038,1.1211586,"up","LINC00482",284185.0,"","","","chr17:79276623-79283053 (-) // 77.12 // q25.3"]
["11716992_at",133.92131,147.83458,140.12401,150.18307,144.04068,147.37566,-0.12160158,0.020996094,-0.056282997,0.043735027,-0.016510963,0.016510963,0.5951043,0.20931736,-1.047445,-0.06687457,1.047445,"down","CIC",23152.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr19:42788816-42799948 (+) // 95.51 // q13.2"]
["11738637_a_at",767.6033,765.9195,801.9908,764.3738,759.7514,744.274,0.0046253204,0.0014572144,0.06785011,-0.0014572144,-0.01020813,-0.039901733,0.5471335,0.16363207,1.0294211,0.041833244,1.0294211,"up","CTBP1",1487.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0019079 // viral genome replication // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0031065 // positive regulation of histone deacetylation // inferred from mutant phenotype /// 0034401 // regulation of transcription by chromatin organization // inferred from mutant phenotype /// 0035067 // negative regulation of histone acetylation // inferred from mutant phenotype /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0050872 // white fat cell differentiation // inferred from sequence or structural similarity /// 0050872 // white fat cell differentiation // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from mutant phenotype /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0090241 // negative regulation of histone H4 acetylation // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0017053 // transcriptional repressor complex // inferred from direct assay /// 0017053 // transcriptional repressor complex // inferred from sequence or structural similarity /// 0017053 // transcriptional repressor complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0001106 // RNA polymerase II transcription corepressor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // traceable author statement /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016616 // oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0048037 // cofactor binding // inferred from electronic annotation /// 0051287 // NAD binding // inferred from sequence or structural similarity /// 0051287 // NAD binding // inferred from electronic annotation","chr4:1205232-1242914 (-) // 90.98 // p16.3"]
["11720930_s_at",132.44571,133.82928,149.44241,116.701645,118.440575,129.25995,0.017562866,0.03255558,0.19175148,-0.16501331,-0.14367485,-0.017562866,0.38219228,0.05877511,1.1402686,0.18937366,1.1402686,"up","DLST",1743.0,"0006091 // generation of precursor metabolites and energy // traceable author statement /// 0006099 // tricarboxylic acid cycle // traceable author statement /// 0006099 // tricarboxylic acid cycle // inferred from electronic annotation /// 0006103 // 2-oxoglutarate metabolic process // inferred from electronic annotation /// 0006554 // lysine catabolic process // traceable author statement /// 0006734 // NADH metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0033512 // L-lysine catabolic process to acetyl-CoA via saccharopine // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement /// 0005792 // microsome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0045252 // oxoglutarate dehydrogenase complex // inferred from electronic annotation","0004149 // dihydrolipoyllysine-residue succinyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0031072 // heat shock protein binding // inferred from electronic annotation /// 0051087 // chaperone binding // inferred from electronic annotation","chr14:75348595-75370443 (+) // 98.64 // q24.3"]
["11723309_at",46.10355,49.04224,47.726143,44.320404,45.10649,49.070972,-0.024950981,0.06419611,0.024950981,-0.08185768,-0.05649376,0.065041065,0.7586157,0.4291527,1.0322808,0.04583547,1.0322808,"up","TNFRSF10D",8793.0,"0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // traceable author statement /// 0007165 // signal transduction // traceable author statement","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // traceable author statement /// 0045569 // TRAIL binding // inferred from electronic annotation","chr8:22993100-23021543 (-) // 89.17 // p21.3"]
["11733872_x_at",1929.5404,1919.4242,1965.2153,1869.4073,1991.8737,1883.0414,0.003791809,-0.003791809,0.03022194,-0.041884422,0.049660683,-0.03140068,0.84276426,0.59027094,1.0125189,0.017948814,1.0125189,"up","LOC100652805 /// LOC100653302 /// PGK1","100652805 /// 100653302 /// 5230","0005975 // carbohydrate metabolic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006094 // gluconeogenesis // traceable author statement /// 0006096 // glycolysis // inferred from electronic annotation /// 0006096 // glycolysis // traceable author statement /// 0016310 // phosphorylation // inferred from sequence or structural similarity /// 0016310 // phosphorylation // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0004618 // phosphoglycerate kinase activity // not recorded /// 0004618 // phosphoglycerate kinase activity // inferred from sequence or structural similarity /// 0004618 // phosphoglycerate kinase activity // inferred from electronic annotation /// 0004618 // phosphoglycerate kinase activity // traceable author statement /// 0005524 // ATP binding // inferred from sequence or structural similarity /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chrX:77359665-77382323 (+) // 82.0 // q21.1"]
["11752991_at",9.3160305,7.271848,8.924704,10.059102,8.725407,8.749466,0.076215506,-0.28117776,0.014304638,0.1869297,-0.018277645,-0.014304876,0.7558591,0.4244317,-1.0829762,-0.11500157,1.0829762,"down","HSP90B3P",343477.0,"0006457 // protein folding // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation","","0005524 // ATP binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // inferred from electronic annotation","chr1:92100567-92109335 (+) // 94.13 // p22.1"]
["11758326_s_at",203.42183,195.87404,206.26265,211.54106,212.27852,204.2274,-0.012855053,-0.06740284,0.007153034,0.04360819,0.048628807,-0.007153511,0.51643854,0.13824248,-1.0372254,-0.052729394,1.0372254,"down","THEM4",117145.0,"0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","","chr1:151849535-151881964 (-) // 98.49 // q21.3 /// chr15:55734929-55735594 (-) // 94.86 // q21.3"]
["11724297_a_at",15.890554,16.33315,14.81348,17.54018,16.415972,15.8075,-0.019816875,0.019816875,-0.12107563,0.122677326,0.027113914,-0.027377129,0.63262814,0.2520738,-1.0578706,-0.0811632,1.0578706,"down","BMP7",655.0,"0001501 // skeletal system development // traceable author statement /// 0001503 // ossification // inferred from electronic annotation /// 0001654 // eye development // inferred from electronic annotation /// 0001656 // metanephros development // inferred from expression pattern /// 0001657 // ureteric bud development // inferred from sequence or structural similarity /// 0001657 // ureteric bud development // inferred from electronic annotation /// 0001707 // mesoderm formation // inferred from electronic annotation /// 0001822 // kidney development // inferred from electronic annotation /// 0001823 // mesonephros development // inferred from expression pattern /// 0001837 // epithelial to mesenchymal transition // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007389 // pattern specification process // inferred from electronic annotation /// 0007411 // axon guidance // inferred from electronic annotation /// 0007435 // salivary gland morphogenesis // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0009880 // embryonic pattern specification // inferred from electronic annotation /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0010664 // negative regulation of striated muscle cell apoptotic process // inferred from sequence or structural similarity /// 0010800 // positive regulation of peptidyl-threonine phosphorylation // inferred from direct assay /// 0010862 // positive regulation of pathway-restricted SMAD protein phosphorylation // inferred from direct assay /// 0010862 // positive regulation of pathway-restricted SMAD protein phosphorylation // traceable author statement /// 0010942 // positive regulation of cell death // inferred from electronic annotation /// 0016358 // dendrite development // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030326 // embryonic limb morphogenesis // inferred from electronic annotation /// 0030501 // positive regulation of bone mineralization // inferred from direct assay /// 0030509 // BMP signaling pathway // inferred from direct assay /// 0030509 // BMP signaling pathway // inferred from electronic annotation /// 0030855 // epithelial cell differentiation // inferred from electronic annotation /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from sequence or structural similarity /// 0034116 // positive regulation of heterotypic cell-cell adhesion // inferred from direct assay /// 0034504 // protein localization to nucleus // inferred from direct assay /// 0035239 // tube morphogenesis // inferred from electronic annotation /// 0040007 // growth // inferred from electronic annotation /// 0042326 // negative regulation of phosphorylation // inferred from direct assay /// 0042347 // negative regulation of NF-kappaB import into nucleus // inferred from sequence or structural similarity /// 0042475 // odontogenesis of dentin-containing tooth // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043401 // steroid hormone mediated signaling pathway // inferred from mutant phenotype /// 0043407 // negative regulation of MAP kinase activity // inferred from direct assay /// 0045597 // positive regulation of cell differentiation // inferred from electronic annotation /// 0045665 // negative regulation of neuron differentiation // inferred from direct assay /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from electronic annotation /// 0045669 // positive regulation of osteoblast differentiation // inferred from direct assay /// 0045746 // negative regulation of Notch signaling pathway // inferred from electronic annotation /// 0045786 // negative regulation of cell cycle // inferred from direct assay /// 0045839 // negative regulation of mitosis // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0048468 // cell development // inferred from electronic annotation /// 0048593 // camera-type eye morphogenesis // inferred from electronic annotation /// 0048596 // embryonic camera-type eye morphogenesis // inferred from electronic annotation /// 0048646 // anatomical structure formation involved in morphogenesis // inferred from electronic annotation /// 0048754 // branching morphogenesis of a tube // inferred from electronic annotation /// 0048762 // mesenchymal cell differentiation // inferred from direct assay /// 0048812 // neuron projection morphogenesis // inferred from direct assay /// 0048812 // neuron projection morphogenesis // inferred from electronic annotation /// 0050768 // negative regulation of neurogenesis // inferred from electronic annotation /// 0051216 // cartilage development // inferred from electronic annotation /// 0060272 // embryonic skeletal joint morphogenesis // inferred from electronic annotation /// 0060389 // pathway-restricted SMAD protein phosphorylation // inferred from direct assay /// 0060395 // SMAD protein signal transduction // inferred from direct assay /// 0060445 // branching involved in salivary gland morphogenesis // inferred from electronic annotation /// 0060485 // mesenchyme development // inferred from sequence or structural similarity /// 0060485 // mesenchyme development // inferred from electronic annotation /// 0060548 // negative regulation of cell death // inferred from direct assay /// 0060686 // negative regulation of prostatic bud formation // inferred from electronic annotation /// 0060687 // regulation of branching involved in prostate gland morphogenesis // inferred from electronic annotation /// 0070487 // monocyte aggregation // inferred from direct assay /// 0071456 // cellular response to hypoxia // inferred from sequence or structural similarity /// 0072040 // negative regulation of mesenchymal stem cell apoptotic process involved in nephron morphogenesis // inferred from electronic annotation /// 0072125 // negative regulation of glomerular mesangial cell proliferation // inferred from direct assay /// 0072133 // metanephric mesenchyme morphogenesis // inferred from electronic annotation /// 0072134 // nephrogenic mesenchyme morphogenesis // inferred from electronic annotation /// 0072136 // metanephric mesenchymal cell proliferation involved in metanephros development // inferred from electronic annotation /// 1900006 // positive regulation of dendrite development // inferred from direct assay /// 1900106 // positive regulation of hyaluranon cable assembly // inferred from direct assay /// 2000121 // regulation of removal of superoxide radicals // inferred from sequence or structural similarity","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation","0005125 // cytokine activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // inferred from electronic annotation","chr20:55743808-55841708 (-) // 89.56 // q13.31"]
["11721212_a_at",6.348172,7.47223,6.5155535,5.8919516,6.6960926,6.53836,-0.040066957,0.19513059,-0.0025205612,-0.14766288,0.03691125,0.0025205612,0.7396456,0.3999881,1.0621037,0.086924694,1.0621037,"up","THBS4",7060.0,"0001938 // positive regulation of endothelial cell proliferation // inferred from direct assay /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0016525 // negative regulation of angiogenesis // inferred from expression pattern /// 0048812 // neuron projection morphogenesis // inferred from electronic annotation /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0051260 // protein homooligomerization // inferred from electronic annotation /// 0051451 // myoblast migration // inferred from direct assay /// 0051781 // positive regulation of cell division // inferred from electronic annotation /// 0071603 // endothelial cell-cell adhesion // inferred from direct assay /// 0090023 // positive regulation of neutrophil chemotaxis // inferred from direct assay","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005604 // basement membrane // inferred from direct assay /// 0005615 // extracellular space // inferred from direct assay /// 0031594 // neuromuscular junction // inferred from electronic annotation","0001968 // fibronectin binding // inferred from electronic annotation /// 0005178 // integrin binding // inferred from direct assay /// 0005509 // calcium ion binding // inferred from direct assay /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005518 // collagen binding // inferred from electronic annotation /// 0008083 // growth factor activity // inferred from electronic annotation /// 0008201 // heparin binding // inferred from direct assay /// 0043237 // laminin-1 binding // inferred from electronic annotation","chr5:79330990-79379110 (+) // 98.43 // q14.1"]
["11735472_a_at",13.008876,12.368893,11.447572,14.064835,14.583989,13.538762,-0.028799772,-0.101579666,-0.21325469,0.0837965,0.13608932,0.028799534,0.31112915,0.03329545,-1.1466618,-0.19743988,1.1466618,"down","CCDC169 /// CCDC169-SOHLH2 /// SOHLH2","100526761 /// 54937 /// 728591","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0048477 // oogenesis // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation","chr13:36804911-36871992 (-) // 100.0 // q13.3"]
["11715686_s_at",1504.8418,1449.2148,1428.388,1521.9033,1477.1041,1599.099,0.013420105,-0.040920258,-0.061803818,0.02968502,-0.013420105,0.10106754,0.5457615,0.16190544,-1.0489012,-0.06887879,1.0489012,"down","ARPC5",10092.0,"0006928 // cellular component movement // traceable author statement /// 0030036 // actin cytoskeleton organization // traceable author statement /// 0030833 // regulation of actin filament polymerization // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005885 // Arp2/3 protein complex // traceable author statement /// 0015629 // actin cytoskeleton // traceable author statement /// 0042995 // cell projection // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0005200 // structural constituent of cytoskeleton // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr1:183595327-183605076 (-) // 91.38 // q25.3"]
["11753825_x_at",478.5323,478.957,534.2075,452.52737,449.9969,463.36942,0.023226738,0.024506569,0.18201065,-0.05738449,-0.06547451,-0.023226738,0.42884532,0.082225055,1.0907168,0.12527661,1.0907168,"up","FKBP1A",2280.0,"0000413 // protein peptidyl-prolyl isomerization // inferred from direct assay /// 0000413 // protein peptidyl-prolyl isomerization // traceable author statement /// 0000413 // protein peptidyl-prolyl isomerization // inferred from electronic annotation /// 0003007 // heart morphogenesis // inferred from sequence or structural similarity /// 0006457 // protein folding // inferred from electronic annotation /// 0006457 // protein folding // non-traceable author statement /// 0006458 // 'de novo' protein folding // traceable author statement /// 0007165 // signal transduction // inferred from mutant phenotype /// 0007183 // SMAD protein complex assembly // inferred from direct assay /// 0018208 // peptidyl-proline modification // not recorded /// 0022417 // protein maturation by protein folding // traceable author statement /// 0031398 // positive regulation of protein ubiquitination // inferred from direct assay /// 0032092 // positive regulation of protein binding // inferred from direct assay /// 0032513 // negative regulation of protein phosphatase type 2B activity // inferred from direct assay /// 0032925 // regulation of activin receptor signaling pathway // inferred from direct assay /// 0034205 // beta-amyloid formation // inferred from direct assay /// 0042026 // protein refolding // traceable author statement /// 0042110 // T cell activation // non-traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from mutant phenotype /// 0043206 // fibril organization // inferred from direct assay /// 0050776 // regulation of immune response // inferred from mutant phenotype /// 0055010 // ventricular cardiac muscle tissue morphogenesis // inferred from sequence or structural similarity /// 0060314 // regulation of ryanodine-sensitive calcium-release channel activity // inferred from direct assay /// 0060314 // regulation of ryanodine-sensitive calcium-release channel activity // inferred from sequence or structural similarity /// 0060347 // heart trabecula formation // inferred from sequence or structural similarity","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0014802 // terminal cisterna // inferred from sequence or structural similarity /// 0030424 // axon // not recorded /// 0033017 // sarcoplasmic reticulum membrane // not recorded","0003755 // peptidyl-prolyl cis-trans isomerase activity // inferred from direct assay /// 0003755 // peptidyl-prolyl cis-trans isomerase activity // inferred from electronic annotation /// 0003755 // peptidyl-prolyl cis-trans isomerase activity // traceable author statement /// 0004871 // signal transducer activity // inferred from mutant phenotype /// 0005024 // transforming growth factor beta-activated receptor activity // traceable author statement /// 0005160 // transforming growth factor beta receptor binding // inferred from sequence or structural similarity /// 0005219 // ryanodine-sensitive calcium-release channel activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005527 // macrolide binding // non-traceable author statement /// 0005528 // FK506 binding // inferred from direct assay /// 0005528 // FK506 binding // non-traceable author statement /// 0016853 // isomerase activity // inferred from electronic annotation /// 0034713 // type I transforming growth factor beta receptor binding // inferred from sequence or structural similarity /// 0046332 // SMAD binding // inferred from physical interaction /// 0048185 // activin binding // inferred from physical interaction","chr6:63921461-63921788 (+) // 99.28 // q12 /// chr20:1352755-1373642 (-) // 100.0 // p13"]
["11728376_s_at",7.294827,7.2481995,7.4270477,7.9973564,7.4269447,8.973367,-0.025905132,-0.03515625,9.775162E-6,0.10674429,-1.001358E-5,0.2728703,0.5194605,0.14056304,-1.1071767,-0.14688544,1.1071767,"down","NMU",10874.0,"0001696 // gastric acid secretion // inferred from electronic annotation /// 0006940 // regulation of smooth muscle contraction // traceable author statement /// 0006940 // regulation of smooth muscle contraction // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007218 // neuropeptide signaling pathway // inferred from electronic annotation /// 0007586 // digestion // traceable author statement /// 0009648 // photoperiodism // inferred from electronic annotation /// 0019233 // sensory perception of pain // inferred from electronic annotation /// 0042755 // eating behavior // inferred from electronic annotation /// 0045987 // positive regulation of smooth muscle contraction // inferred from electronic annotation /// 0046887 // positive regulation of hormone secretion // inferred from electronic annotation /// 0050806 // positive regulation of synaptic transmission // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0043195 // terminal button // inferred from electronic annotation","0005102 // receptor binding // traceable author statement /// 0042922 // neuromedin U receptor binding // inferred from electronic annotation","chr4:56461397-56502465 (-) // 93.62 // q12"]
["11717341_at",376.7769,364.10895,352.1981,379.68817,383.8232,385.22403,-0.005552292,-0.05489254,-0.10287571,0.005552292,0.0211792,0.026434898,0.39907488,0.066286586,-1.0512912,-0.072162375,1.0512912,"down","PTGFRN",5738.0,"0034389 // lipid particle organization // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr1:117452572-117532975 (+) // 96.47 // p13.1"]
["11759881_at",12.29977,14.347953,12.642264,13.0574,12.152601,12.879256,-0.053020716,0.16919303,-0.013397217,0.033215523,-0.07038689,0.013397217,0.85050476,0.6058652,1.0296707,0.04218304,1.0296707,"up","PPIA",5478.0,"0000413 // protein peptidyl-prolyl isomerization // inferred from direct assay /// 0000413 // protein peptidyl-prolyl isomerization // inferred from electronic annotation /// 0002576 // platelet degranulation // traceable author statement /// 0006278 // RNA-dependent DNA replication // traceable author statement /// 0006457 // protein folding // inferred from electronic annotation /// 0006457 // protein folding // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0019047 // provirus integration // traceable author statement /// 0019059 // initiation of viral infection // traceable author statement /// 0019061 // uncoating of virus // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0030260 // entry into host cell // traceable author statement /// 0045069 // regulation of viral genome replication // inferred from mutant phenotype /// 0045069 // regulation of viral genome replication // traceable author statement /// 0050900 // leukocyte migration // traceable author statement","0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement","0003755 // peptidyl-prolyl cis-trans isomerase activity // inferred from direct assay /// 0003755 // peptidyl-prolyl cis-trans isomerase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016853 // isomerase activity // inferred from electronic annotation /// 0042277 // peptide binding // inferred from electronic annotation /// 0046790 // virion binding // non-traceable author statement /// 0051082 // unfolded protein binding // traceable author statement","chr11:3913430-3914122 (-) // 75.66 // p15.4"]
["11735609_a_at",6.384714,6.9135847,6.556603,6.590923,6.5653977,6.9453607,-0.04305935,0.07175255,-0.004732847,0.0027990341,-0.0027990341,0.07836819,0.8884772,0.6929345,-1.0126503,-0.018135983,1.0126503,"down","FER1L5",90342.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr2:97308573-97370624 (+) // 99.98 // q11.2"]
["11734876_a_at",10.854667,11.01161,10.033048,9.773229,10.894237,10.350028,0.03434038,0.055050373,-0.07921529,-0.117067814,0.03959012,-0.03434038,0.82179785,0.544962,1.0285875,0.04066447,1.0285875,"up","TMEM30B",161291.0,"0070863 // positive regulation of protein exit from endoplasmic reticulum // inferred from direct assay","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr14:61744087-61748558 (-) // 92.78 // q23.1"]
["11721891_at",23.55785,23.674715,22.102234,22.344439,22.382431,22.255816,0.07506657,0.08220577,-0.016949177,-0.0012254715,0.0012254715,-0.0069589615,0.5859575,0.19999807,1.034615,0.04909407,1.034615,"up","LPHN1",22859.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007218 // neuropeptide signaling pathway // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0015643 // toxin binding // inferred from electronic annotation /// 0016524 // latrotoxin receptor activity // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr19:14258548-14316999 (-) // 97.96 // p13.12"]
["11731997_at",46.791664,44.84015,42.23058,48.280384,52.544243,46.53484,0.003970146,-0.05749035,-0.14399338,0.049155712,0.1712513,-0.003970146,0.47484955,0.109747514,-1.100366,-0.13798346,1.100366,"down","TRIM58",25893.0,"","0005622 // intracellular // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:248020471-248042611 (+) // 61.22 // q44"]
["11725741_x_at",24.905079,25.417057,22.977547,27.575926,25.84859,24.160187,-0.014678478,0.014678478,-0.1308937,0.13229084,0.038967133,-0.05848694,0.68224895,0.3150986,-1.0579134,-0.081221566,1.0579134,"down","SMPDL3B",27293.0,"0006685 // sphingomyelin catabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation","0004767 // sphingomyelin phosphodiesterase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity, acting on glycosyl bonds // inferred from electronic annotation","chr1:28261466-28285663 (+) // 94.1 // p35.3"]
["11751294_a_at",7.9334464,6.7835875,7.8136673,7.429863,6.2138753,7.194065,0.11787629,-0.10802293,0.09592819,0.02326417,-0.23457813,-0.02326417,0.70698994,0.34912208,1.0818145,0.11345317,1.0818145,"up","ST6GALNAC5",81849.0,"0006486 // protein glycosylation // inferred from electronic annotation /// 0006688 // glycosphingolipid biosynthetic process // inferred from sequence or structural similarity /// 0006688 // glycosphingolipid biosynthetic process // inferred from electronic annotation /// 0009312 // oligosaccharide biosynthetic process // inferred from sequence or structural similarity /// 0009312 // oligosaccharide biosynthetic process // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030173 // integral to Golgi membrane // inferred from electronic annotation","0001665 // alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase activity // inferred from sequence or structural similarity /// 0001665 // alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase activity // inferred from electronic annotation /// 0008373 // sialyltransferase activity // inferred from sequence or structural similarity /// 0008373 // sialyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation","chr1:77333170-77529522 (+) // 81.07 // p31.1"]
["11717275_s_at",1623.5338,1590.3788,1715.3639,1781.513,1820.8419,1838.8806,-0.10667133,-0.13643837,-0.027294159,0.027294159,0.058796883,0.07301903,0.2347329,0.01534985,-1.10433,-0.14317127,1.10433,"down","COL5A1",1289.0,"0001568 // blood vessel development // inferred from electronic annotation /// 0003007 // heart morphogenesis // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from mutant phenotype /// 0007411 // axon guidance // traceable author statement /// 0016477 // cell migration // inferred from mutant phenotype /// 0030199 // collagen fibril organization // inferred from mutant phenotype /// 0030199 // collagen fibril organization // non-traceable author statement /// 0030199 // collagen fibril organization // inferred from electronic annotation /// 0032964 // collagen biosynthetic process // inferred from mutant phenotype /// 0035313 // wound healing, spreading of epidermal cells // inferred from mutant phenotype /// 0043206 // fibril organization // inferred from mutant phenotype /// 0043588 // skin development // inferred from mutant phenotype /// 0043588 // skin development // inferred from electronic annotation /// 0045112 // integrin biosynthetic process // inferred from mutant phenotype /// 0048592 // eye morphogenesis // inferred from mutant phenotype /// 0051128 // regulation of cellular component organization // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005581 // collagen // inferred from electronic annotation /// 0005588 // collagen type V // inferred from mutant phenotype /// 0005588 // collagen type V // traceable author statement /// 0005604 // basement membrane // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from mutant phenotype /// 0031012 // extracellular matrix // inferred from electronic annotation","0005178 // integrin binding // non-traceable author statement /// 0005201 // extracellular matrix structural constituent // inferred from electronic annotation /// 0008201 // heparin binding // inferred from direct assay /// 0008201 // heparin binding // inferred from electronic annotation /// 0043394 // proteoglycan binding // inferred from physical interaction /// 0048407 // platelet-derived growth factor binding // inferred from direct assay","chr9:137533565-137736689 (+) // 98.38 // q34.3"]
["11739947_a_at",32.496758,33.11217,34.47975,31.437235,35.766823,35.689796,-0.056259632,-0.029193878,0.029193878,-0.104081154,0.082066536,0.07895613,0.84805954,0.60077155,-1.0265001,-0.037733775,1.0265001,"down","PFKFB2",5208.0,"0005975 // carbohydrate metabolic process // traceable author statement /// 0006000 // fructose metabolic process // traceable author statement /// 0006000 // fructose metabolic process // inferred from electronic annotation /// 0006003 // fructose 2,6-bisphosphate metabolic process // inferred from electronic annotation /// 0006006 // glucose metabolic process // traceable author statement /// 0006007 // glucose catabolic process // inferred from electronic annotation /// 0006089 // lactate metabolic process // inferred from electronic annotation /// 0006090 // pyruvate metabolic process // inferred from electronic annotation /// 0006096 // glycolysis // inferred from direct assay /// 0006096 // glycolysis // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0009749 // response to glucose stimulus // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0032024 // positive regulation of insulin secretion // inferred from electronic annotation /// 0033133 // positive regulation of glucokinase activity // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0003873 // 6-phosphofructo-2-kinase activity // inferred from direct assay /// 0003873 // 6-phosphofructo-2-kinase activity // inferred from electronic annotation /// 0003873 // 6-phosphofructo-2-kinase activity // traceable author statement /// 0004331 // fructose-2,6-bisphosphate 2-phosphatase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0019900 // kinase binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction","chr1:207226592-207254369 (+) // 99.21 // q32.2"]
["11752129_a_at",373.87408,354.50607,390.923,363.3739,346.42413,369.40643,0.029220581,-0.04752159,0.09355259,-0.01187706,-0.08079243,0.01187706,0.7078648,0.35130882,1.0367117,0.05201474,1.0367117,"up","BIVM-ERCC5 /// ERCC5","100533467 /// 2073","0000718 // nucleotide-excision repair, DNA damage removal // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006283 // transcription-coupled nucleotide-excision repair // inferred from mutant phenotype /// 0006283 // transcription-coupled nucleotide-excision repair // traceable author statement /// 0006289 // nucleotide-excision repair // inferred from electronic annotation /// 0006289 // nucleotide-excision repair // traceable author statement /// 0006295 // nucleotide-excision repair, DNA incision, 3'-to lesion // inferred from direct assay /// 0006295 // nucleotide-excision repair, DNA incision, 3'-to lesion // inferred from mutant phenotype /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0008340 // determination of adult lifespan // inferred from electronic annotation /// 0009411 // response to UV // inferred from direct assay /// 0009411 // response to UV // inferred from mutant phenotype /// 0009411 // response to UV // inferred from electronic annotation /// 0009650 // UV protection // inferred from genetic interaction /// 0009650 // UV protection // inferred from electronic annotation /// 0010225 // response to UV-C // inferred from mutant phenotype /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005675 // holo TFIIH complex // inferred from direct assay /// 0016591 // DNA-directed RNA polymerase II, holoenzyme // inferred from direct assay","0000405 // bubble DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from direct assay /// 0003697 // single-stranded DNA binding // inferred from direct assay /// 0003697 // single-stranded DNA binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004519 // endonuclease activity // inferred from electronic annotation /// 0004519 // endonuclease activity // traceable author statement /// 0004520 // endodeoxyribonuclease activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016788 // hydrolase activity, acting on ester bonds // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from physical interaction","chr13:103498396-103524611 (+) // 97.64 // q33.1"]
["11717129_s_at",2426.3335,2434.6785,2522.406,2421.3281,2482.366,2343.1165,-0.0024766922,0.0024766922,0.05354595,-0.0054559708,0.030461311,-0.052825928,0.75072813,0.4176326,1.0189775,0.027122227,1.0189775,"up","SAR1A",56681.0,"0006184 // GTP catabolic process // non-traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006888 // ER to Golgi vesicle-mediated transport // non-traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // non-traceable author statement /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016529 // sarcoplasmic reticulum // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // non-traceable author statement /// 0005525 // GTP binding // inferred from electronic annotation","chr10:71909325-71930279 (-) // 84.52 // q22.1"]
["11740589_s_at",514.93396,523.8668,550.1145,500.45395,555.55444,511.3222,-0.012406349,0.012406349,0.082938194,-0.053556442,0.09713459,-0.022561073,0.9012603,0.72220117,1.0144097,0.02064039,1.0144097,"up","RYK",6259.0,"0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007409 // axonogenesis // inferred from electronic annotation /// 0007411 // axon guidance // inferred from sequence or structural similarity /// 0007411 // axon guidance // inferred from electronic annotation /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0022038 // corpus callosum development // inferred from sequence or structural similarity /// 0022038 // corpus callosum development // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from sequence or structural similarity /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from sequence or structural similarity /// 0031175 // neuron projection development // inferred from electronic annotation /// 0043410 // positive regulation of MAPK cascade // inferred from direct assay /// 0048705 // skeletal system morphogenesis // inferred from electronic annotation /// 0048843 // negative regulation of axon extension involved in axon guidance // inferred from electronic annotation /// 0050919 // negative chemotaxis // inferred from electronic annotation /// 0071679 // commissural neuron axon guidance // inferred from electronic annotation","0005624 // membrane fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from direct assay /// 0005109 // frizzled binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0017147 // Wnt-protein binding // inferred from electronic annotation /// 0042813 // Wnt-activated receptor activity // inferred from electronic annotation","chr3:133875977-133969586 (-) // 92.38 // q22.2"]
["11715690_x_at",359.62863,349.4576,367.6194,366.22037,362.2831,364.37598,-0.014764786,-0.056155205,0.016940117,0.011439323,-0.004155159,0.004155159,0.72052205,0.3705459,-1.0152298,-0.021806352,1.0152298,"down","CD164",8763.0,"0006955 // immune response // traceable author statement /// 0007155 // cell adhesion // inferred from direct assay /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007157 // heterophilic cell-cell adhesion // inferred from direct assay /// 0007162 // negative regulation of cell adhesion // non-traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007275 // multicellular organismal development // traceable author statement /// 0007517 // muscle organ development // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // non-traceable author statement /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0030097 // hemopoiesis // non-traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005764 // lysosome // inferred from direct assay /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr6:109687716-109703978 (-) // 97.26 // q21"]
["11741555_s_at",800.7131,800.49347,784.37897,818.1696,830.20776,854.2694,-0.015557289,-0.015953064,-0.0452919,0.015557289,0.036629677,0.077848434,0.2961546,0.02941131,-1.04895,-0.06894585,1.04895,"down","LIPA /// LOC100507575","100507575 /// 3988","0000902 // cell morphogenesis // inferred from electronic annotation /// 0001816 // cytokine production // inferred from electronic annotation /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from electronic annotation /// 0016042 // lipid catabolic process // inferred from electronic annotation /// 0016125 // sterol metabolic process // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0048771 // tissue remodeling // inferred from electronic annotation /// 0048873 // homeostasis of number of cells within a tissue // inferred from electronic annotation","0005764 // lysosome // inferred from electronic annotation /// 0005764 // lysosome // traceable author statement","0004771 // sterol esterase activity // inferred from direct assay /// 0004771 // sterol esterase activity // inferred from electronic annotation /// 0016298 // lipase activity // inferred from direct assay /// 0016298 // lipase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016788 // hydrolase activity, acting on ester bonds // inferred from electronic annotation","chr10:90973327-91011660 (-) // 97.23 // q23.31"]
["11758631_s_at",8.225705,8.558301,10.35896,10.554222,8.729997,9.237217,-0.12658024,-0.069395304,0.20608735,0.23302865,-0.040738583,0.040738583,0.8479515,0.60059583,-1.0528542,-0.07430564,1.0528542,"down","FOXO4",4303.0,"0000080 // G1 phase of mitotic cell cycle // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from direct assay /// 0007095 // mitotic cell cycle G2/M transition DNA damage checkpoint // not recorded /// 0007095 // mitotic cell cycle G2/M transition DNA damage checkpoint // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007389 // pattern specification process // not recorded /// 0007517 // muscle organ development // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // inferred from direct assay /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0009790 // embryo development // not recorded /// 0009888 // tissue development // not recorded /// 0016525 // negative regulation of angiogenesis // inferred from direct assay /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // not recorded /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0048513 // organ development // not recorded /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // not recorded /// 0051151 // negative regulation of smooth muscle cell differentiation // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // not recorded /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation","0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // not recorded /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // not recorded /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008301 // DNA binding, bending // not recorded /// 0019899 // enzyme binding // inferred from physical interaction /// 0019901 // protein kinase binding // not recorded /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chrX:70321367-70323384 (+) // 98.84 // q13.1"]
["11744193_x_at",1645.1864,1689.9993,1782.8889,1699.1174,1718.3135,1645.8738,-0.042653084,-0.0038814545,0.07331276,0.0038814545,0.02008915,-0.04205036,0.90049994,0.7197983,1.0104183,0.014952667,1.0104183,"up","SUMO1",7341.0,"0006281 // DNA repair // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016925 // protein sumoylation // inferred from direct assay /// 0016925 // protein sumoylation // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0031334 // positive regulation of protein complex assembly // inferred from direct assay /// 0032436 // positive regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0032880 // regulation of protein localization // traceable author statement /// 0043392 // negative regulation of DNA binding // inferred from mutant phenotype /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0060021 // palate development // inferred from sequence or structural similarity /// 0060021 // palate development // inferred from electronic annotation /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060334 // regulation of interferon-gamma-mediated signaling pathway // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005643 // nuclear pore // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016604 // nuclear body // inferred from electronic annotation /// 0016605 // PML body // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0019789 // SUMO ligase activity // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction","chr2:203070904-203103322 (-) // 91.91 // q33.1"]
["11761061_at",101.090385,98.16338,98.604454,98.70469,92.19576,96.46599,0.039155006,-0.0032339096,0.0032339096,0.004699707,-0.09371805,-0.028398514,0.5610121,0.17586216,1.036838,0.052190576,1.036838,"up","UQCRC1",7384.0,"0006119 // oxidative phosphorylation // traceable author statement /// 0006122 // mitochondrial electron transport, ubiquinol to cytochrome c // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0009060 // aerobic respiration // traceable author statement /// 0014823 // response to activity // inferred from electronic annotation /// 0022900 // electron transport chain // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0043279 // response to alkaloid // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // traceable author statement","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005746 // mitochondrial respiratory chain // traceable author statement /// 0005750 // mitochondrial respiratory chain complex III // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0070469 // respiratory chain // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0008121 // ubiquinol-cytochrome-c reductase activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0032403 // protein complex binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:48641403-48647069 (-) // 99.38 // p21.31"]
["11751683_a_at",115.023186,112.73249,114.04304,113.9783,106.26432,112.35338,0.021093845,-0.007927895,0.008747101,0.007927895,-0.093173504,-0.012787819,0.6539622,0.2791011,1.0281011,0.03998212,1.0281011,"up","RAB11A",8766.0,"0000910 // cytokinesis // inferred from mutant phenotype /// 0006184 // GTP catabolic process // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006833 // water transport // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from direct assay /// 0031175 // neuron projection development // inferred from mutant phenotype /// 0048169 // regulation of long-term neuronal synaptic plasticity // inferred from electronic annotation /// 0048227 // plasma membrane to endosome transport // non-traceable author statement /// 0051223 // regulation of protein transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0072659 // protein localization in plasma membrane // inferred from direct assay","0005739 // mitochondrion // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030133 // transport vesicle // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // traceable author statement /// 0032154 // cleavage furrow // inferred from direct assay /// 0032154 // cleavage furrow // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay /// 0055037 // recycling endosome // inferred from electronic annotation /// 0055038 // recycling endosome membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0019905 // syntaxin binding // non-traceable author statement","chr15:66161793-66180585 (+) // 99.8 // q22.31"]
["11738815_at",11.484727,10.07664,10.747018,13.238882,9.941714,11.440538,0.050670624,-0.138031,-0.04510951,0.2557354,-0.15747929,0.045109272,0.80962247,0.5218765,-1.0658062,-0.09194506,1.0658062,"down","EGFR",1956.0,"0000165 // MAPK cascade // non-traceable author statement /// 0000186 // activation of MAPKK activity // non-traceable author statement /// 0000902 // cell morphogenesis // inferred from electronic annotation /// 0001503 // ossification // non-traceable author statement /// 0001892 // embryonic placenta development // inferred from electronic annotation /// 0001942 // hair follicle development // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006950 // response to stress // non-traceable author statement /// 0007165 // signal transduction // inferred from direct assay /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from direct assay /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // inferred from direct assay /// 0007173 // epidermal growth factor receptor signaling pathway // non-traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // inferred from electronic annotation /// 0007202 // activation of phospholipase C activity // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007435 // salivary gland morphogenesis // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008544 // epidermis development // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016337 // cell-cell adhesion // inferred from mutant phenotype /// 0021795 // cerebral cortex cell migration // inferred from electronic annotation /// 0023014 // signal transduction by phosphorylation // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from mutant phenotype /// 0031659 // positive regulation of cyclin-dependent protein kinase activity involved in G1/S // inferred from direct assay /// 0035413 // positive regulation of catenin import into nucleus // inferred from mutant phenotype /// 0042059 // negative regulation of epidermal growth factor receptor signaling pathway // traceable author statement /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042177 // negative regulation of protein catabolic process // inferred from direct assay /// 0042327 // positive regulation of phosphorylation // inferred from direct assay /// 0043006 // activation of phospholipase A2 activity by calcium-mediated signaling // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043406 // positive regulation of MAP kinase activity // inferred from direct assay /// 0045429 // positive regulation of nitric oxide biosynthetic process // inferred from direct assay /// 0045739 // positive regulation of DNA repair // inferred from direct assay /// 0045740 // positive regulation of DNA replication // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from mutant phenotype /// 0046777 // protein autophosphorylation // inferred from electronic annotation /// 0048146 // positive regulation of fibroblast proliferation // inferred from electronic annotation /// 0048546 // digestive tract morphogenesis // inferred from electronic annotation /// 0050679 // positive regulation of epithelial cell proliferation // inferred from direct assay /// 0050679 // positive regulation of epithelial cell proliferation // inferred from electronic annotation /// 0050730 // regulation of peptidyl-tyrosine phosphorylation // inferred from mutant phenotype /// 0050730 // regulation of peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0050999 // regulation of nitric-oxide synthase activity // inferred from direct assay /// 0051205 // protein insertion into membrane // traceable author statement /// 0051897 // positive regulation of protein kinase B signaling cascade // inferred from mutant phenotype /// 0060571 // morphogenesis of an epithelial fold // inferred from electronic annotation /// 0070141 // response to UV-A // inferred from direct assay","0000139 // Golgi membrane // inferred from electronic annotation /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // non-traceable author statement /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from direct assay /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0030122 // AP-2 adaptor complex // traceable author statement /// 0030139 // endocytic vesicle // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation /// 0045121 // membrane raft // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0070435 // Shc-EGFR complex // inferred from sequence or structural similarity","0000166 // nucleotide binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // non-traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004709 // MAP kinase kinase kinase activity // non-traceable author statement /// 0004713 // protein tyrosine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from mutant phenotype /// 0004713 // protein tyrosine kinase activity // traceable author statement /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // traceable author statement /// 0004716 // receptor signaling protein tyrosine kinase activity // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from direct assay /// 0005006 // epidermal growth factor-activated receptor activity // inferred from direct assay /// 0005006 // epidermal growth factor-activated receptor activity // non-traceable author statement /// 0005006 // epidermal growth factor-activated receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0019903 // protein phosphatase binding // inferred from physical interaction /// 0030235 // nitric-oxide synthase regulator activity // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from direct assay /// 0051015 // actin filament binding // inferred from direct assay","chr7:55086724-55238738 (+) // 96.65 // p11.2"]
["11753382_a_at",17.491465,15.897016,18.770775,19.802328,17.247889,19.247875,-0.05091858,-0.18881369,0.05091858,0.1281004,-0.071149826,0.08712959,0.66750073,0.29550242,-1.0799501,-0.11096464,1.0799501,"down","ZC4H2",55906.0,"","","0046872 // metal ion binding // inferred from electronic annotation","chrX:64137300-64196330 (-) // 100.0 // q11.2"]
["11732621_a_at",84.36707,84.378174,73.2504,75.3137,83.01216,87.00713,0.011678696,0.011868477,-0.1921649,-0.15208912,-0.011678696,0.056132317,0.9456627,0.83515406,-1.0141896,-0.020327387,1.0141896,"down","CRB3",92359.0,"0034329 // cell junction assembly // traceable author statement /// 0045216 // cell-cell junction organization // traceable author statement /// 0070830 // tight junction assembly // traceable author statement /// 0072659 // protein localization in plasma membrane // inferred from direct assay","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005923 // tight junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","0017124 // SH3 domain binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from physical interaction","chr19:6464248-6467228 (+) // 96.64 // p13.3"]
["11726910_x_at",1044.0941,1027.5409,1110.5016,1056.5442,1036.0405,1022.9723,0.0055856705,-0.01747036,0.094545364,0.022686958,-0.0055856705,-0.023899078,0.77831334,0.46254456,1.0208844,0.029819503,1.0208844,"up","MRI1",84245.0,"0000096 // sulfur amino acid metabolic process // traceable author statement /// 0006595 // polyamine metabolic process // traceable author statement /// 0008652 // cellular amino acid biosynthetic process // inferred from electronic annotation /// 0009086 // methionine biosynthetic process // inferred from electronic annotation /// 0019509 // L-methionine salvage from methylthioadenosine // not recorded /// 0019509 // L-methionine salvage from methylthioadenosine // inferred from electronic annotation /// 0019509 // L-methionine salvage from methylthioadenosine // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044237 // cellular metabolic process // inferred from electronic annotation /// 0044249 // cellular biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // not recorded /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0042995 // cell projection // inferred from electronic annotation","0016853 // isomerase activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0046523 // S-methyl-5-thioribose-1-phosphate isomerase activity // not recorded /// 0046523 // S-methyl-5-thioribose-1-phosphate isomerase activity // inferred from electronic annotation","chr19:13875361-13885095 (+) // 38.97 // p13.2"]
["11729067_a_at",18.330135,17.92656,15.633495,19.842764,17.478086,18.903063,0.016059399,-0.016059399,-0.2135179,0.13045502,-0.052610874,0.060461998,0.638819,0.25989717,-1.0846839,-0.117274664,1.0846839,"down","PM20D1",148811.0,"0006508 // proteolysis // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","0008233 // peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:205797153-205819270 (-) // 94.85 // q32.1"]
["11735923_x_at",66.155846,66.790306,75.55989,65.731094,78.54068,61.040707,-0.0068850517,0.0068850517,0.18486643,-0.016177654,0.2406869,-0.1229825,0.94534135,0.83415294,1.0194421,0.027779812,1.0194421,"up","AMELY",266.0,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0031214 // biomineral tissue development // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0044420 // extracellular matrix part // inferred by curator","0030345 // structural constituent of tooth enamel // inferred from direct assay","chrY:6733958-6742068 (-) // 100.0 // p11.2"]
["11715838_a_at",397.87497,409.2076,404.0329,424.4616,419.80994,430.54095,-0.058969498,-0.01845169,-0.03681183,0.03434944,0.01845169,0.054865837,0.19090144,0.009349595,-1.0526068,-0.073966645,1.0526068,"down","NEU1",4758.0,"0006665 // sphingolipid metabolic process // traceable author statement /// 0006687 // glycosphingolipid metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement","0005764 // lysosome // traceable author statement /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0030054 // cell junction // inferred from direct assay /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043202 // lysosomal lumen // traceable author statement /// 0043202 // lysosomal lumen // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0004308 // exo-alpha-sialidase activity // traceable author statement /// 0004308 // exo-alpha-sialidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity, acting on glycosyl bonds // inferred from electronic annotation /// 0052794 // exo-alpha-(2->3)-sialidase activity // inferred from electronic annotation /// 0052795 // exo-alpha-(2->6)-sialidase activity // inferred from electronic annotation /// 0052796 // exo-alpha-(2->8)-sialidase activity // inferred from electronic annotation","chr6:31826829-31830709 (-) // 98.05 // p21.33"]
["11724977_a_at",44.43111,45.45149,41.579388,50.908363,49.573753,52.120026,-0.09538174,-0.062624454,-0.19108343,0.10095072,0.062624454,0.13488579,0.18070155,0.0079012755,-1.1613882,-0.21585023,1.1613882,"down","ITGB4",3691.0,"0007154 // cell communication // inferred from electronic annotation /// 0007155 // cell adhesion // non-traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007160 // cell-matrix adhesion // inferred from electronic annotation /// 0007229 // integrin-mediated signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0009611 // response to wounding // inferred from direct assay /// 0031581 // hemidesmosome assembly // inferred from direct assay /// 0031581 // hemidesmosome assembly // traceable author statement /// 0034329 // cell junction assembly // traceable author statement /// 0046847 // filopodium assembly // inferred from electronic annotation /// 0048870 // cell motility // inferred from mutant phenotype","0005604 // basement membrane // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0008305 // integrin complex // inferred from electronic annotation /// 0008305 // integrin complex // traceable author statement /// 0009925 // basal plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030056 // hemidesmosome // inferred from direct assay /// 0030056 // hemidesmosome // inferred from electronic annotation /// 0031252 // cell leading edge // inferred from direct assay","0004872 // receptor activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr17:73720775-73753899 (+) // 97.34 // q25.1"]
["11727630_s_at",7.1194515,6.436931,8.493286,7.710317,8.139994,7.6992397,-0.11398697,-0.2593801,0.14056993,0.0010371208,0.079274416,-0.0010373592,0.7607859,0.43432826,-1.0747669,-0.10402376,1.0747669,"down","APBA2",321.0,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0035264 // multicellular organism growth // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation","0001540 // beta-amyloid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr15:29131174-29410518 (+) // 97.63 // q13.1"]
["11721492_a_at",7.1584396,7.2586565,7.063781,6.8031726,7.482293,6.54181,0.009602308,0.029659748,-0.009602308,-0.063835144,0.07343769,-0.12035298,0.78247935,0.4695193,1.0329736,0.04680345,1.0329736,"up","ANKRD7",56311.0,"0008584 // male gonad development // traceable author statement","","","chr7:117864158-117882761 (+) // 77.6 // q31.31"]
["11745824_x_at",342.97144,333.23627,305.51297,349.65424,343.66293,341.64725,0.002790451,-0.038752556,-0.1640644,0.030631065,0.0056962967,-0.002790451,0.58913386,0.20259193,-1.0554472,-0.07785443,1.0554472,"down","ACAA1",30.0,"0000038 // very long-chain fatty acid metabolic process // inferred from mutant phenotype /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006635 // fatty acid beta-oxidation // inferred from mutant phenotype /// 0008152 // metabolic process // inferred from electronic annotation /// 0008206 // bile acid metabolic process // inferred from mutant phenotype /// 0033540 // fatty acid beta-oxidation using acyl-CoA oxidase // traceable author statement /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005777 // peroxisome // inferred from direct assay /// 0005777 // peroxisome // inferred from electronic annotation /// 0005782 // peroxisomal matrix // traceable author statement /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0003824 // catalytic activity // inferred from electronic annotation /// 0003988 // acetyl-CoA C-acyltransferase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016401 // palmitoyl-CoA oxidase activity // inferred from mutant phenotype /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0016747 // transferase activity, transferring acyl groups other than amino-acyl groups // inferred from electronic annotation","chr3:38164206-38178628 (-) // 96.78 // p22.2"]
["11753172_a_at",28.24819,27.182451,21.270315,33.21209,29.07864,26.422451,0.027741432,-0.027741432,-0.38157558,0.2612915,0.069542885,-0.06865263,0.6315565,0.2508479,-1.1603707,-0.21458578,1.1603707,"down","GRB7",2886.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0017148 // negative regulation of translation // inferred from sequence or structural similarity /// 0017148 // negative regulation of translation // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0034063 // stress granule assembly // inferred from sequence or structural similarity /// 0034063 // stress granule assembly // inferred from electronic annotation /// 0050900 // leukocyte migration // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0005925 // focal adhesion // inferred from electronic annotation /// 0010494 // cytoplasmic stress granule // inferred from sequence or structural similarity /// 0010494 // cytoplasmic stress granule // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005070 // SH3/SH2 adaptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from direct assay /// 0035091 // phosphatidylinositol binding // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction","chr17:37894558-37900857 (+) // 99.74 // q12"]
["11760649_a_at",24.277351,22.016956,24.473486,24.703478,22.40451,15.55264,0.05791092,-0.08308506,0.06951952,0.08301401,-0.05791092,-0.58454037,0.73280156,0.39005938,1.1497027,0.2012608,1.1497027,"up","MKNK1",8569.0,"0006417 // regulation of translation // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007243 // intracellular protein kinase cascade // inferred from direct assay /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr1:47023089-47082515 (-) // 99.93 // p33"]
["11738270_a_at",18.206917,18.805338,18.4315,18.753424,21.081196,19.133793,-0.044661522,0.001994133,-0.026974678,-0.001994133,0.1668086,0.026974678,0.5661741,0.18097821,-1.062265,-0.087143764,1.062265,"down","SERP2",387923.0,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr13:44947886-44971849 (+) // 91.7 // q14.11"]
["11735541_at",5.752686,5.50949,5.7737145,6.160878,6.7806993,5.936803,-0.025357246,-0.08767414,-0.020093203,0.07354307,0.2118411,0.020093203,0.4162063,0.0749837,-1.1066513,-0.14620072,1.1066513,"down","CCDC122",160857.0,"","","","chr13:44410490-44454599 (-) // 80.6 // q14.11"]
["11745604_x_at",73.223816,69.87399,64.60381,68.23785,67.873985,75.540665,0.084649086,0.017091274,-0.09604502,-0.017091751,-0.024805546,0.12958956,0.90303504,0.7264318,-1.0191259,-0.027332343,1.0191259,"down","NFKBIB",4793.0,"0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006351 // transcription, DNA-dependent // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007253 // cytoplasmic sequestering of NF-kappaB // inferred from electronic annotation /// 0008063 // Toll signaling pathway // traceable author statement /// 0032481 // positive regulation of type I interferon production // traceable author statement /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0051092 // positive regulation of NF-kappaB transcription factor activity // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation","0003713 // transcription coactivator activity // traceable author statement /// 0004871 // signal transducer activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr19:39390672-39399458 (+) // 96.25 // q13.2"]
["11754940_s_at",805.62946,793.55896,871.3998,808.3233,802.8352,737.77625,0.002506256,-0.019272804,0.11572456,0.0073223114,-0.002506256,-0.12442684,0.66169435,0.28831792,1.051797,0.07285633,1.051797,"up","TSN",7247.0,"0006310 // DNA recombination // traceable author statement /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003729 // mRNA binding // inferred from electronic annotation /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004519 // endonuclease activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr2:122523605-122524869 (+) // 82.15 // q14.3"]
["11734199_a_at",11.038661,12.854059,8.991761,12.744476,13.110639,12.654894,-0.20221877,0.017440319,-0.4981079,0.0050885677,0.045954466,-0.0050883293,0.5661741,0.18103382,-1.1834075,-0.242947,1.1834075,"down","ZNF844",284391.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:12175527-12191178 (+) // 67.75 // p13.2"]
["11721375_a_at",17.186703,19.655441,20.629675,19.30824,20.83842,19.713163,-0.19575119,-0.0021152496,0.06767702,-0.027827263,0.08220196,0.0021152496,0.8010044,0.5064339,-1.0440758,-0.06222652,1.0440758,"down","BCL2",596.0,"0000082 // G1/S transition of mitotic cell cycle // inferred from electronic annotation /// 0000209 // protein polyubiquitination // inferred from direct assay /// 0000902 // cell morphogenesis // inferred from electronic annotation /// 0001101 // response to acid // inferred from electronic annotation /// 0001503 // ossification // inferred from electronic annotation /// 0001541 // ovarian follicle development // inferred from electronic annotation /// 0001656 // metanephros development // inferred from electronic annotation /// 0001657 // ureteric bud development // inferred from electronic annotation /// 0001658 // branching involved in ureteric bud morphogenesis // inferred from electronic annotation /// 0001662 // behavioral fear response // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001776 // leukocyte homeostasis // inferred from electronic annotation /// 0001782 // B cell homeostasis // inferred from electronic annotation /// 0001822 // kidney development // inferred from electronic annotation /// 0001836 // release of cytochrome c from mitochondria // inferred from sequence or structural similarity /// 0001836 // release of cytochrome c from mitochondria // non-traceable author statement /// 0001952 // regulation of cell-matrix adhesion // inferred from electronic annotation /// 0002260 // lymphocyte homeostasis // inferred from electronic annotation /// 0002320 // lymphoid progenitor cell differentiation // inferred from electronic annotation /// 0002326 // B cell lineage commitment // inferred from electronic annotation /// 0002360 // T cell lineage commitment // inferred from electronic annotation /// 0002520 // immune system development // inferred from electronic annotation /// 0003014 // renal system process // inferred from electronic annotation /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0006582 // melanin metabolic process // inferred from electronic annotation /// 0006808 // regulation of nitrogen utilization // inferred from electronic annotation /// 0006874 // cellular calcium ion homeostasis // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from direct assay /// 0006916 // anti-apoptosis // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0006959 // humoral immune response // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from mutant phenotype /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0007015 // actin filament organization // inferred from electronic annotation /// 0007409 // axonogenesis // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0007565 // female pregnancy // non-traceable author statement /// 0007568 // aging // inferred from electronic annotation /// 0007569 // cell aging // inferred from electronic annotation /// 0007584 // response to nutrient // inferred from electronic annotation /// 0008219 // cell death // inferred from direct assay /// 0008219 // cell death // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0008584 // male gonad development // inferred from electronic annotation /// 0008629 // induction of apoptosis by intracellular signals // traceable author statement /// 0008633 // activation of pro-apoptotic gene products // traceable author statement /// 0009314 // response to radiation // non-traceable author statement /// 0009408 // response to heat // inferred from electronic annotation /// 0009605 // response to external stimulus // inferred from electronic annotation /// 0009636 // response to toxin // inferred from direct assay /// 0009636 // response to toxin // inferred from electronic annotation /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0010035 // response to inorganic substance // inferred from electronic annotation /// 0010039 // response to iron ion // inferred from direct assay /// 0010044 // response to aluminum ion // inferred from electronic annotation /// 0010224 // response to UV-B // inferred from electronic annotation /// 0010332 // response to gamma radiation // inferred from electronic annotation /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0010559 // regulation of glycoprotein biosynthetic process // inferred from electronic annotation /// 0014031 // mesenchymal cell development // inferred from electronic annotation /// 0014042 // positive regulation of neuron maturation // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0014911 // positive regulation of smooth muscle cell migration // inferred from electronic annotation /// 0016049 // cell growth // inferred from electronic annotation /// 0016337 // cell-cell adhesion // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from electronic annotation /// 0018107 // peptidyl-threonine phosphorylation // inferred from electronic annotation /// 0021747 // cochlear nucleus development // inferred from electronic annotation /// 0022612 // gland morphogenesis // inferred from electronic annotation /// 0022898 // regulation of transmembrane transporter activity // inferred from direct assay /// 0030097 // hemopoiesis // inferred from electronic annotation /// 0030183 // B cell differentiation // inferred from electronic annotation /// 0030217 // T cell differentiation // inferred from electronic annotation /// 0030279 // negative regulation of ossification // inferred from electronic annotation /// 0030307 // positive regulation of cell growth // inferred from direct assay /// 0030308 // negative regulation of cell growth // inferred from electronic annotation /// 0030318 // melanocyte differentiation // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // inferred from electronic annotation /// 0030890 // positive regulation of B cell proliferation // inferred from mutant phenotype /// 0031000 // response to caffeine // inferred from electronic annotation /// 0031103 // axon regeneration // inferred from electronic annotation /// 0031647 // regulation of protein stability // inferred from electronic annotation /// 0032835 // glomerulus development // inferred from electronic annotation /// 0032848 // negative regulation of cellular pH reduction // inferred from direct assay /// 0032868 // response to insulin stimulus // inferred from electronic annotation /// 0032880 // regulation of protein localization // inferred from electronic annotation /// 0033033 // negative regulation of myeloid cell apoptotic process // inferred from electronic annotation /// 0033077 // T cell differentiation in thymus // inferred from electronic annotation /// 0033591 // response to L-ascorbic acid // inferred from electronic annotation /// 0033689 // negative regulation of osteoblast proliferation // inferred from electronic annotation /// 0034097 // response to cytokine stimulus // inferred from direct assay /// 0034097 // response to cytokine stimulus // inferred from electronic annotation /// 0034349 // glial cell apoptotic process // inferred from electronic annotation /// 0035094 // response to nicotine // inferred from direct assay /// 0035094 // response to nicotine // inferred from electronic annotation /// 0035265 // organ growth // inferred from electronic annotation /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0040007 // growth // inferred from electronic annotation /// 0040018 // positive regulation of multicellular organism growth // inferred from electronic annotation /// 0042100 // B cell proliferation // inferred from direct assay /// 0042221 // response to chemical stimulus // inferred from electronic annotation /// 0042493 // response to drug // inferred from direct assay /// 0042493 // response to drug // inferred from mutant phenotype /// 0042493 // response to drug // inferred from electronic annotation /// 0042542 // response to hydrogen peroxide // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043029 // T cell homeostasis // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043067 // regulation of programmed cell death // inferred from electronic annotation /// 0043085 // positive regulation of catalytic activity // inferred from electronic annotation /// 0043375 // CD8-positive, alpha-beta T cell lineage commitment // inferred from electronic annotation /// 0043434 // response to peptide hormone stimulus // inferred from electronic annotation /// 0043496 // regulation of protein homodimerization activity // inferred from direct assay /// 0043497 // regulation of protein heterodimerization activity // inferred from direct assay /// 0043524 // negative regulation of neuron apoptotic process // inferred from direct assay /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0043583 // ear development // inferred from electronic annotation /// 0043627 // response to estrogen stimulus // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045471 // response to ethanol // inferred from electronic annotation /// 0045636 // positive regulation of melanocyte differentiation // inferred from electronic annotation /// 0045930 // negative regulation of mitotic cell cycle // inferred from electronic annotation /// 0046671 // negative regulation of retinal cell programmed cell death // inferred from electronic annotation /// 0046688 // response to copper ion // inferred from electronic annotation /// 0046902 // regulation of mitochondrial membrane permeability // inferred from sequence or structural similarity /// 0048041 // focal adhesion assembly // inferred from electronic annotation /// 0048066 // developmental pigmentation // inferred from electronic annotation /// 0048070 // regulation of developmental pigmentation // inferred from electronic annotation /// 0048087 // positive regulation of developmental pigmentation // inferred from electronic annotation /// 0048536 // spleen development // inferred from electronic annotation /// 0048538 // thymus development // inferred from electronic annotation /// 0048545 // response to steroid hormone stimulus // inferred from electronic annotation /// 0048546 // digestive tract morphogenesis // inferred from electronic annotation /// 0048589 // developmental growth // inferred from electronic annotation /// 0048599 // oocyte development // inferred from electronic annotation /// 0048709 // oligodendrocyte differentiation // inferred from electronic annotation /// 0048743 // positive regulation of skeletal muscle fiber development // inferred from electronic annotation /// 0048753 // pigment granule organization // inferred from electronic annotation /// 0048873 // homeostasis of number of cells within a tissue // inferred from electronic annotation /// 0050790 // regulation of catalytic activity // inferred from electronic annotation /// 0050853 // B cell receptor signaling pathway // inferred from mutant phenotype /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation /// 0051402 // neuron apoptotic process // traceable author statement /// 0051402 // neuron apoptotic process // inferred from electronic annotation /// 0051412 // response to corticosterone stimulus // inferred from electronic annotation /// 0051593 // response to folic acid // inferred from electronic annotation /// 0051607 // defense response to virus // inferred from direct assay /// 0051726 // regulation of cell cycle // inferred from electronic annotation /// 0051881 // regulation of mitochondrial membrane potential // inferred from sequence or structural similarity /// 0051902 // negative regulation of mitochondrial depolarization // traceable author statement /// 0051924 // regulation of calcium ion transport // inferred from direct assay /// 0070059 // intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress // inferred from direct assay /// 0071310 // cellular response to organic substance // inferred from electronic annotation /// 0072593 // reactive oxygen species metabolic process // inferred from electronic annotation /// 2001234 // negative regulation of apoptotic signaling pathway // inferred from mutant phenotype","0005622 // intracellular // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from direct assay /// 0005741 // mitochondrial outer membrane // traceable author statement /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from direct assay /// 0031965 // nuclear membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation /// 0043209 // myelin sheath // inferred from electronic annotation /// 0046930 // pore complex // inferred from direct assay","0002020 // protease binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0015267 // channel activity // inferred from direct assay /// 0019903 // protein phosphatase binding // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0051400 // BH domain binding // inferred from electronic annotation /// 0051434 // BH3 domain binding // inferred from physical interaction /// 0051721 // protein phosphatase 2A binding // inferred from electronic annotation","chr18:60790581-60987019 (-) // 96.73 // q21.33"]
["11715890_x_at",2613.31,2625.2275,2787.4878,2607.364,2684.1033,2664.7979,-0.017355919,-0.010791779,0.07573128,-0.02064228,0.021205902,0.010791779,0.9042729,0.72925824,1.0084056,0.012075987,1.0084056,"up","ATP5I",521.0,"0006200 // ATP catabolic process // inferred from direct assay /// 0006754 // ATP biosynthetic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0015986 // ATP synthesis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0042776 // mitochondrial ATP synthesis coupled proton transport // inferred by curator /// 0042776 // mitochondrial ATP synthesis coupled proton transport // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046034 // ATP metabolic process // inferred from electronic annotation","0000276 // mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) // inferred from electronic annotation /// 0005739 // mitochondrion // inferred by curator /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005753 // mitochondrial proton-transporting ATP synthase complex // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0045263 // proton-transporting ATP synthase complex, coupling factor F(o) // inferred from electronic annotation","0015078 // hydrogen ion transmembrane transporter activity // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from direct assay /// 0022857 // transmembrane transporter activity // inferred by curator","chr4:666224-668127 (-) // 69.88 // p16.3"]
["11741639_a_at",67.87401,71.35622,68.50978,79.65939,68.94396,79.96254,-0.04737234,0.024807453,-0.03392172,0.18361282,-0.024807453,0.18909264,0.5212337,0.14184478,-1.0979366,-0.13479479,1.0979366,"down","DIO2",1734.0,"0001514 // selenocysteine incorporation // non-traceable author statement /// 0006590 // thyroid hormone generation // traceable author statement /// 0006590 // thyroid hormone generation // inferred from electronic annotation /// 0009409 // response to cold // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042403 // thyroid hormone metabolic process // inferred from direct assay /// 0042404 // thyroid hormone catabolic process // inferred from electronic annotation /// 0042446 // hormone biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred by curator /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004800 // thyroxine 5'-deiodinase activity // inferred from direct assay /// 0004800 // thyroxine 5'-deiodinase activity // traceable author statement /// 0004800 // thyroxine 5'-deiodinase activity // inferred from electronic annotation /// 0008430 // selenium binding // inferred by curator /// 0008430 // selenium binding // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction","chr14:80663869-80677843 (-) // 97.08 // q31.1"]
["11737705_s_at",13.164364,12.180374,12.786516,12.61477,14.295131,12.345025,0.051769495,-0.060309887,0.009754658,-0.009754658,0.17065549,-0.040938616,0.8558571,0.619277,-1.0278164,-0.0395826,1.0278164,"down","LOC441956",441956.0,"","","","chr21:15051592-15053459 (-) // 94.97 // q11.2"]
["11745173_a_at",252.51622,254.29265,274.18478,281.91608,274.59,266.30722,-0.09774399,-0.08763075,0.021028519,0.061145782,0.023159027,-0.021028519,0.54899347,0.165759,-1.0539995,-0.07587424,1.0539995,"down","ATF6",22926.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006457 // protein folding // traceable author statement /// 0006950 // response to stress // traceable author statement /// 0006986 // response to unfolded protein // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0006990 // positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement","0000139 // Golgi membrane // traceable author statement /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003713 // transcription coactivator activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation","chr1:161736044-161835750 (+) // 76.51 // q23.3"]
["11743650_s_at",3323.8376,3225.237,3578.858,3232.554,3294.632,3182.5369,0.026453972,-0.016990662,0.13310337,-0.013721466,0.013721466,-0.036219597,0.64870524,0.2724563,1.0421735,0.05959548,1.0421735,"up","DEK",7913.0,"0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0016568 // chromatin modification // inferred from electronic annotation /// 0019079 // viral genome replication // traceable author statement /// 2000779 // regulation of double-strand break repair // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0042393 // histone binding // inferred from direct assay","chr6:18224247-18265054 (-) // 96.95 // p22.3"]
["11722908_a_at",855.34753,856.6892,924.3228,852.1217,834.2898,827.5919,0.0027256012,0.004986763,0.114611626,-0.0027256012,-0.033236504,-0.04486561,0.54160064,0.1575406,1.0480571,0.06771729,1.0480571,"up","KLHL13",90293.0,"0000910 // cytokinesis // inferred from mutant phenotype /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0031463 // Cul3-RING ubiquitin ligase complex // inferred from direct assay","0004842 // ubiquitin-protein ligase activity // inferred from direct assay","chrX:117031775-117107760 (-) // 96.61 // q24"]
["11736322_a_at",40.576946,40.558228,42.068504,40.36245,43.548756,46.069687,-0.026040077,-0.026705742,0.026040077,-0.033686638,0.07593107,0.15711737,0.6417999,0.2635425,-1.0536209,-0.07535592,1.0536209,"down","BAIAP3",8938.0,"0007186 // G-protein coupled receptor signaling pathway // inferred from physical interaction /// 0007269 // neurotransmitter secretion // traceable author statement","","0008022 // protein C-terminus binding // traceable author statement","chr16:1384504-1399440 (+) // 97.1 // p13.3"]
["11727575_a_at",107.203224,93.90079,133.5382,104.24598,134.73695,103.450836,0.020178318,-0.1709609,0.33708286,-0.020178318,0.34997606,-0.031225204,0.9526684,0.8564378,-1.0262798,-0.037424125,1.0262798,"down","TMEM237",65062.0,"0030030 // cell projection organization // inferred from electronic annotation /// 0030111 // regulation of Wnt receptor signaling pathway // inferred from mutant phenotype /// 0030111 // regulation of Wnt receptor signaling pathway // inferred from electronic annotation /// 0042384 // cilium assembly // inferred from mutant phenotype /// 0042384 // cilium assembly // inferred from electronic annotation","0005929 // cilium // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0035869 // ciliary transition zone // inferred from direct assay /// 0035869 // ciliary transition zone // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","","chr2:202484910-202507686 (-) // 72.55 // q33.1"]
["11752260_a_at",11.895017,11.848913,10.379865,10.854665,12.262412,11.485433,0.028077364,0.022474766,-0.16849232,-0.103964806,0.07196283,-0.022474527,0.9364887,0.80962145,-1.0147712,-0.021154514,1.0147712,"down","TMC3",342125.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr15:81629982-81666497 (-) // 93.69 // q25.1"]
["11745069_a_at",116.561134,95.179214,102.46379,117.70736,121.95224,111.17617,0.034119606,-0.25824785,-0.15185261,0.048237324,0.0993495,-0.034119606,0.5411267,0.15718365,-1.1197288,-0.16314936,1.1197288,"down","C5orf44",80006.0,"","","","chr5:64958926-64961899 (+) // 89.97 // q12.3"]
["11748282_a_at",151.2494,153.293,154.00346,140.3163,139.80542,144.62672,0.03229761,0.051660538,0.058331013,-0.075948715,-0.08121061,-0.03229761,0.13124941,0.0031127357,1.0796638,0.110582076,1.0796638,"up","PPP3CB",5532.0,"0006468 // protein phosphorylation // inferred from sequence or structural similarity /// 0006470 // protein dephosphorylation // inferred from sequence or structural similarity /// 0007165 // signal transduction // non-traceable author statement /// 0007612 // learning // traceable author statement /// 0007613 // memory // traceable author statement /// 0016311 // dephosphorylation // traceable author statement /// 0017156 // calcium ion-dependent exocytosis // inferred from sequence or structural similarity /// 0035176 // social behavior // inferred from expression pattern /// 0035690 // cellular response to drug // inferred from direct assay /// 0035774 // positive regulation of insulin secretion involved in cellular response to glucose stimulus // inferred from sequence or structural similarity /// 0042098 // T cell proliferation // non-traceable author statement /// 0042110 // T cell activation // traceable author statement /// 0045893 // positive regulation of transcription, DNA-dependent // non-traceable author statement /// 0048167 // regulation of synaptic plasticity // traceable author statement /// 0048675 // axon extension // traceable author statement /// 0050796 // regulation of insulin secretion // inferred from sequence or structural similarity","0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005955 // calcineurin complex // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004722 // protein serine/threonine phosphatase activity // non-traceable author statement /// 0005509 // calcium ion binding // inferred from direct assay /// 0005516 // calmodulin binding // inferred from direct assay /// 0005516 // calmodulin binding // non-traceable author statement /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0008144 // drug binding // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from direct assay /// 0030346 // protein phosphatase 2B binding // inferred from direct assay /// 0033192 // calmodulin-dependent protein phosphatase activity // inferred from sequence or structural similarity /// 0033192 // calmodulin-dependent protein phosphatase activity // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from physical interaction","chr10:75196996-75226245 (-) // 98.36 // q22.2"]
["11728165_a_at",8.881403,9.401824,10.059827,8.63723,9.635777,10.959127,-0.09988308,-0.017730236,0.07986283,-0.14010191,0.017730236,0.20339036,0.90970504,0.7416579,-1.0278215,-0.039589792,1.0278215,"down","SPINLW1 /// SPINLW1-WFDC6","100526773 /// 57119","0006508 // proteolysis // inferred from electronic annotation /// 0010466 // negative regulation of peptidase activity // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation","chr20:44169549-44175016 (-) // 46.5 // q13.12"]
["11760927_a_at",35.40596,35.083622,35.92833,34.310673,34.816868,35.24303,0.009924412,-0.0032701492,0.03105402,-0.035410404,-0.014281273,0.0032701492,0.51071995,0.13487887,1.0196283,0.028043302,1.0196283,"up","LRCH3",84859.0,"","0005576 // extracellular region // inferred from electronic annotation","","chr3:197518109-197610643 (+) // 99.4 // q29"]
["11762829_at",20.605946,19.749083,19.861977,19.39574,18.458836,16.145014,0.074297905,0.0130229,0.021246433,-0.0130229,-0.0844512,-0.2776742,0.48897666,0.118517876,1.1182467,0.16123846,1.1182467,"up","LOC100506242",1.00506242E8,"","","","chr1:180138711-180139938 (+) // 98.94 // q25.2"]
["11725481_a_at",18.418175,18.93891,17.963755,19.004475,17.158846,21.551012,-0.02011156,0.02011156,-0.05615282,0.02509737,-0.12228918,0.20651388,0.8488556,0.6021814,-1.0389731,-0.05515829,1.0389731,"down","CD27",939.0,"0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from direct assay /// 0006916 // anti-apoptosis // inferred from sequence or structural similarity /// 0006916 // anti-apoptosis // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from direct assay /// 0006917 // induction of apoptosis // inferred from sequence or structural similarity /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // non-traceable author statement /// 0008588 // release of cytoplasmic sequestered NF-kappaB // non-traceable author statement /// 0016064 // immunoglobulin mediated immune response // non-traceable author statement /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0045471 // response to ethanol // inferred from electronic annotation /// 0045579 // positive regulation of B cell differentiation // non-traceable author statement /// 0046330 // positive regulation of JNK cascade // inferred from sequence or structural similarity /// 0046330 // positive regulation of JNK cascade // inferred from electronic annotation","0005576 // extracellular region // non-traceable author statement /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0043027 // cysteine-type endopeptidase inhibitor activity involved in apoptotic process // inferred from direct assay","chr12:6554005-6560879 (+) // 98.05 // p13.31"]
["11747748_a_at",14.304109,12.896113,12.877413,17.034012,14.889253,12.243908,0.07474661,-0.07474661,-0.0768404,0.32673526,0.13258839,-0.14961886,0.75916314,0.430569,-1.0934205,-0.12884833,1.0934205,"down","ETV1",2115.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0048935 // peripheral nervous system neuron development // traceable author statement","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr7:13935307-14026086 (-) // 98.49 // p21.2"]
["11753489_a_at",609.0592,604.3293,630.58105,623.0689,622.57074,634.9341,-0.032232285,-0.04347992,0.017867088,5.7697296E-4,-5.7697296E-4,0.027791977,0.6287485,0.24584772,-1.0199834,-0.028545687,1.0199834,"down","EED",8726.0,"0006349 // regulation of gene expression by genetic imprinting // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0016571 // histone methylation // inferred from direct assay /// 0016571 // histone methylation // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // non-traceable author statement","0001739 // sex chromatin // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0035098 // ESC/E(Z) complex // inferred from direct assay /// 0035098 // ESC/E(Z) complex // inferred from electronic annotation /// 0045120 // pronucleus // inferred from electronic annotation","0003682 // chromatin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0042054 // histone methyltransferase activity // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction","chr11:85956265-85988054 (+) // 99.75 // q14.2"]
["11736030_a_at",883.63794,885.80884,920.1736,876.2611,858.484,878.4128,0.004278183,0.007818222,0.06272888,-0.007816315,-0.03738594,-0.004278183,0.50156033,0.12800923,1.0291371,0.041435238,1.0291371,"up","SLC16A3",9123.0,"0006090 // pyruvate metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0015711 // organic anion transport // inferred from electronic annotation /// 0015718 // monocarboxylic acid transport // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0050900 // leukocyte migration // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from direct assay","0008028 // monocarboxylic acid transmembrane transporter activity // traceable author statement /// 0015293 // symporter activity // inferred from electronic annotation /// 0015355 // secondary active monocarboxylate transmembrane transporter activity // inferred from electronic annotation","chr17:80193855-80197354 (+) // 93.66 // q25.3"]
["11759273_x_at",17.23718,18.757242,18.900064,19.24969,17.291378,18.985884,-0.12739563,-0.0054717064,0.0054717064,0.031915665,-0.12286663,0.012007713,0.93837523,0.8149736,-1.0112578,-0.016150784,1.0112578,"down","HIST1H2BC /// HIST1H2BE /// HIST1H2BF /// HIST1H2BG /// HIST1H2BI","8339 /// 8343 /// 8344 /// 8346 /// 8347","0006334 // nucleosome assembly // non-traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0042742 // defense response to bacterium // inferred from electronic annotation","0000786 // nucleosome // non-traceable author statement /// 0000786 // nucleosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation","chr6:26273143-26273640 (+) // 100.0 // p22.2"]
["11720863_at",387.63565,395.64148,398.80264,397.99387,359.5742,388.34583,-0.016066551,0.013425827,0.024907112,0.021978378,-0.12447834,-0.013425827,0.7209256,0.37119752,1.0324444,0.04606403,1.0324444,"up","PNPLA4",8228.0,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0016042 // lipid catabolic process // inferred from electronic annotation","","0004806 // triglyceride lipase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0050253 // retinyl-palmitate esterase activity // inferred from electronic annotation","chrX:7866803-7895477 (-) // 83.75 // p22.31"]
["11749228_a_at",194.1846,194.38675,191.91331,223.00679,201.75075,214.62213,-0.028323174,-0.02682209,-0.045297146,0.1713357,0.02682209,0.116046906,0.3041726,0.031344034,-1.1005431,-0.13821569,1.1005431,"down","TMEM30A",55754.0,"0036010 // protein localization in endosome // inferred from mutant phenotype /// 0070863 // positive regulation of protein exit from endoplasmic reticulum // inferred from direct assay","0005783 // endoplasmic reticulum // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr6:75965367-75994502 (-) // 93.61 // q14.1"]
["11716184_s_at",439.54068,408.7307,482.29358,440.59927,435.90298,435.70737,0.0059947968,-0.098851204,0.13990974,0.009465218,-0.0059947968,-0.0066423416,0.94057024,0.8209686,1.0116721,0.01674182,1.0116721,"up","ALCAM",214.0,"0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007411 // axon guidance // inferred from electronic annotation /// 0008045 // motor axon guidance // inferred from electronic annotation","0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation","0005102 // receptor binding // traceable author statement","chr3:105085712-105295746 (+) // 96.66 // q13.11"]
["11727671_a_at",47.60194,46.11533,48.433834,45.6643,46.11533,45.922115,0.045773983,0.0,0.07076883,-0.014179707,0.0,-0.0060572624,0.45368788,0.09706607,1.0321075,0.045593206,1.0321075,"up","SYT17",51760.0,"0006810 // transport // inferred from electronic annotation","0005802 // trans-Golgi network // inferred from electronic annotation /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation","chr16:19179534-19279656 (+) // 91.6 // p12.3"]
["11724241_at",6.707027,7.1272187,7.023595,7.265898,7.0590997,6.7446346,-0.0701735,0.017492294,-0.0036373138,0.045294285,0.0036373138,-0.06210661,0.9102536,0.743031,-1.0100181,-0.014381162,1.0100181,"down","TCF4",6925.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006352 // transcription initiation, DNA-dependent // inferred from sequence or structural similarity /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0007399 // nervous system development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0065004 // protein-DNA complex assembly // inferred from sequence or structural similarity","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from sequence or structural similarity /// 0005667 // transcription factor complex // inferred from electronic annotation","0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from sequence or structural similarity /// 0001011 // sequence-specific DNA binding RNA polymerase recruiting transcription factor activity // inferred from sequence or structural similarity /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from sequence or structural similarity /// 0001087 // TFIIB-class binding transcription factor activity // inferred from sequence or structural similarity /// 0001093 // TFIIB-class transcription factor binding // inferred from sequence or structural similarity /// 0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003714 // transcription corepressor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from sequence or structural similarity /// 0046982 // protein heterodimerization activity // non-traceable author statement /// 0070888 // E-box binding // inferred from sequence or structural similarity","chr18:52889564-53255860 (-) // 95.08 // q21.2"]
["11741178_a_at",8.890246,9.982499,9.725614,9.224666,9.208417,9.172844,-0.052001476,0.11517596,0.077564,0.0012714863,-0.0012717247,-0.0068559647,0.73065233,0.38673764,1.0346898,0.04919829,1.0346898,"up","UPB1",51733.0,"0006206 // pyrimidine base metabolic process // traceable author statement /// 0006807 // nitrogen compound metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0019483 // beta-alanine biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046135 // pyrimidine nucleoside catabolic process // traceable author statement /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0003824 // catalytic activity // inferred from electronic annotation /// 0003837 // beta-ureidopropionase activity // not recorded /// 0003837 // beta-ureidopropionase activity // inferred from electronic annotation /// 0003837 // beta-ureidopropionase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016810 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr22:24891114-24922552 (+) // 71.56 // q11.23"]
["11746802_x_at",457.79178,442.1722,469.6796,422.41492,442.70743,435.01065,0.04921055,-8.72612E-4,0.086195946,-0.066820145,8.72612E-4,-0.024430275,0.42438546,0.079378426,1.0533396,0.07497064,1.0533396,"up","BNIP3L",665.0,"0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from direct assay /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0008634 // negative regulation of survival gene product expression // inferred from direct assay /// 0035694 // mitochondrial protein catabolic process // inferred from mutant phenotype /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0051607 // defense response to virus // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from direct assay /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005740 // mitochondrial envelope // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from mutant phenotype /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031224 // intrinsic to membrane // traceable author statement","0005515 // protein binding // inferred from physical interaction /// 0005521 // lamin binding // inferred from direct assay /// 0005521 // lamin binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from direct assay","chr8:26240552-26268534 (+) // 98.94 // p21.2"]
["11732426_a_at",5.7177844,5.0088706,5.932504,6.9698906,5.509489,5.665106,0.006676674,-0.18429422,0.05986166,0.2923565,-0.046860933,-0.006676674,0.7475771,0.41286018,-1.0858752,-0.11885824,1.0858752,"down","GNA14",9630.0,"0006184 // GTP catabolic process // traceable author statement /// 0006471 // protein ADP-ribosylation // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007188 // adenylate cyclase-modulating G-protein coupled receptor signaling pathway // not recorded /// 0007596 // blood coagulation // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0060158 // phospholipase C-activating dopamine receptor signaling pathway // not recorded","0005834 // heterotrimeric G-protein complex // not recorded /// 0005834 // heterotrimeric G-protein complex // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0031234 // extrinsic to internal side of plasma membrane // not recorded","0000166 // nucleotide binding // inferred from electronic annotation /// 0001664 // G-protein coupled receptor binding // not recorded /// 0003924 // GTPase activity // traceable author statement /// 0004871 // signal transducer activity // not recorded /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0004871 // signal transducer activity // non-traceable author statement /// 0005525 // GTP binding // inferred from electronic annotation /// 0019001 // guanyl nucleotide binding // inferred from electronic annotation /// 0031683 // G-protein beta/gamma-subunit complex binding // not recorded /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:80037512-80263664 (-) // 98.65 // q21.2"]
["11745158_x_at",936.63965,950.58105,890.7524,828.6057,813.49664,836.4794,0.117816925,0.1391325,0.045347214,-0.058991432,-0.08554077,-0.045347214,0.16465795,0.0059369532,1.1204348,0.16405864,1.1204348,"up","MUC1",4582.0,"0006916 // anti-apoptosis // inferred from direct assay /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // inferred from direct assay /// 0006978 // DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator // inferred from direct assay /// 0010944 // negative regulation of transcription by competitive promoter binding // inferred from direct assay /// 0016266 // O-glycan processing // traceable author statement /// 0036003 // positive regulation of transcription from RNA polymerase II promoter in response to stress // inferred from direct assay /// 0043618 // regulation of transcription from RNA polymerase II promoter in response to stress // inferred from direct assay /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0090240 // positive regulation of histone H4 acetylation // inferred from direct assay","0000790 // nuclear chromatin // inferred from direct assay /// 0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // not recorded /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005796 // Golgi lumen // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0009986 // cell surface // not recorded /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // not recorded /// 0016324 // apical plasma membrane // inferred from electronic annotation","0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0002039 // p53 binding // inferred from physical interaction /// 0003712 // transcription cofactor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction","chr1:155158423-155162684 (-) // 100.0 // q22"]
["11722098_a_at",126.895226,129.41072,124.26723,142.35341,127.886375,143.59395,-0.019772053,0.008547306,-0.04996395,0.14606762,-0.008546829,0.15858507,0.4617393,0.10203228,-1.0860558,-0.11909817,1.0860558,"down","RICTOR",253260.0,"0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0009790 // embryo development // inferred from sequence or structural similarity /// 0009790 // embryo development // inferred from electronic annotation /// 0030838 // positive regulation of actin filament polymerization // inferred from electronic annotation /// 0031295 // T cell costimulation // traceable author statement /// 0031532 // actin cytoskeleton reorganization // inferred from mutant phenotype /// 0032008 // positive regulation of TOR signaling cascade // inferred from mutant phenotype /// 0032314 // regulation of Rac GTPase activity // inferred from electronic annotation /// 0032956 // regulation of actin cytoskeleton organization // inferred from mutant phenotype /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0051896 // regulation of protein kinase B signaling cascade // inferred from direct assay /// 0051896 // regulation of protein kinase B signaling cascade // inferred from electronic annotation","0005829 // cytosol // traceable author statement /// 0031932 // TORC2 complex // inferred from direct assay /// 0031932 // TORC2 complex // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0043022 // ribosome binding // inferred from electronic annotation","chr5:38938021-39074503 (-) // 97.8 // p13.1"]
["11761794_x_at",19.154806,21.92195,20.09663,23.482288,22.600248,20.014864,-0.13195848,0.06271124,-0.06271124,0.16190815,0.10667372,-0.068593025,0.65945137,0.28560308,-1.079714,-0.11064913,1.079714,"down","FAM122C",159091.0,"","","","chrX:133941299-133955985 (+) // 83.02 // q26.3"]
["11732234_a_at",21.157198,21.029755,23.960922,19.946388,21.19072,20.80635,0.0043582916,-0.0043582916,0.1838932,-0.08066273,0.0066423416,-0.01976633,0.6207752,0.23678564,1.0662605,0.09255989,1.0662605,"up","RND1",27289.0,"0006184 // GTP catabolic process // non-traceable author statement /// 0007015 // actin filament organization // inferred from direct assay /// 0007162 // negative regulation of cell adhesion // inferred from direct assay /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0016322 // neuron remodeling // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005912 // adherens junction // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // non-traceable author statement /// 0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation","chr12:49250931-49259681 (-) // 97.96 // q13.12"]
["11717396_a_at",913.5214,957.38983,919.4409,920.2636,945.03375,959.8555,-0.02976799,0.03789997,-0.020449638,-0.019159317,0.019159317,0.041610718,0.8243878,0.5507058,-1.0125381,-0.01797616,1.0125381,"down","CHTF8",54921.0,"0006260 // DNA replication // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation","chr16:68973480-69155398 (-) // 95.1 // q22.1"]
["11731720_at",11.634552,13.341908,9.683912,13.559581,10.226969,14.169149,-0.09877491,0.09877467,-0.3635285,0.12212205,-0.28481197,0.18556261,0.82562083,0.5529863,-1.0933843,-0.12880051,1.0933843,"down","LURAP1",541468.0,"0001819 // positive regulation of cytokine production // inferred from direct assay /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from direct assay","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","","chr1:46669005-46687158 (+) // 83.24 // p34.1"]
["11759378_at",17.929659,13.675977,14.251364,16.358171,16.781946,18.317545,0.11388731,-0.2768166,-0.2173605,-0.018449306,0.018449306,0.14476538,0.633141,0.25310984,-1.1289788,-0.17501846,1.1289788,"down","NHSL2",340527.0,"","","","chrX:71353497-71361212 (+) // 99.3 // q13.1"]
["11728541_s_at",21.097313,21.298101,20.240377,21.499212,18.774311,20.030159,0.029911518,0.043577194,-0.029911518,0.05713606,-0.13838768,-0.04497385,0.7423058,0.40461266,1.0400125,0.05660084,1.0400125,"up","MDGA1",266727.0,"0001764 // neuron migration // inferred from sequence or structural similarity /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007420 // brain development // inferred from sequence or structural similarity /// 0007420 // brain development // inferred from electronic annotation /// 0021527 // spinal cord association neuron differentiation // inferred from sequence or structural similarity /// 0021527 // spinal cord association neuron differentiation // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031225 // anchored to membrane // inferred from electronic annotation /// 0046658 // anchored to plasma membrane // inferred from direct assay /// 0046658 // anchored to plasma membrane // inferred from sequence or structural similarity /// 0046658 // anchored to plasma membrane // inferred from electronic annotation","","chr6:37600292-37665766 (-) // 93.0 // p21.2"]
["11741765_a_at",19.43752,18.712206,19.274792,21.145733,19.526289,22.41411,-0.0032868385,-0.058151245,-0.0154156685,0.11823559,0.0032868385,0.20227623,0.4417906,0.09012212,-1.0969903,-0.13355082,1.0969903,"down","METTL20",254013.0,"0006479 // protein methylation // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0008168 // methyltransferase activity // inferred from electronic annotation /// 0008276 // protein methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr12:31800090-31821817 (+) // 67.24 // p11.21"]
["11720384_at",363.98383,364.54077,358.48438,379.54062,390.8739,394.79605,-0.031292915,-0.029087067,-0.05325699,0.029087067,0.071536064,0.08594036,0.16462703,0.0059125083,-1.0718231,-0.10006684,1.0718231,"down","STX6",10228.0,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006906 // vesicle fusion // inferred from physical interaction /// 0007032 // endosome organization // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0042147 // retrograde transport, endosome to Golgi // inferred from mutant phenotype /// 0048193 // Golgi vesicle transport // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030136 // clathrin-coated vesicle // traceable author statement /// 0032588 // trans-Golgi network membrane // inferred from sequence or structural similarity /// 0032588 // trans-Golgi network membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0005484 // SNAP receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr1:180941851-180992257 (-) // 97.46 // q25.3"]
["11730642_at",5.6079593,5.4252877,6.1387067,6.494954,5.211996,5.383618,0.023888111,-0.023888111,0.15434694,0.2357316,-0.08175182,-0.03501177,0.9755146,0.9214806,1.0082078,0.011793018,1.0082078,"up","CXorf48",54967.0,"","","","chrX:134290460-134305751 (-) // 86.07 // q26.3"]
["11717826_x_at",6.4369297,6.758947,5.957563,6.395232,6.891093,6.6949663,-0.028352022,0.042073727,-0.14000249,-0.03772807,0.07000804,0.028352022,0.71982753,0.3689708,-1.0441321,-0.062304266,1.0441321,"down","STMN2",11075.0,"0007026 // negative regulation of microtubule depolymerization // inferred from direct assay /// 0010976 // positive regulation of neuron projection development // inferred from direct assay /// 0010977 // negative regulation of neuron projection development // inferred from direct assay /// 0030182 // neuron differentiation // non-traceable author statement /// 0031115 // negative regulation of microtubule polymerization // inferred from direct assay /// 0031117 // positive regulation of microtubule depolymerization // inferred from direct assay /// 0035556 // intracellular signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030426 // growth cone // inferred from electronic annotation /// 0031982 // vesicle // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr8:80523048-80578397 (+) // 92.49 // q21.13"]
["11759396_a_at",51.813503,50.78459,51.183945,50.375145,50.065117,45.21837,0.034776688,0.005839348,0.017139912,-0.005839348,-0.014745712,-0.16164255,0.5794328,0.19331451,1.057014,0.07999447,1.057014,"up","BTN2A3P",54718.0,"","0016021 // integral to membrane // inferred from electronic annotation","","chr6:26422346-26431843 (+) // 100.0 // p22.2"]
["11718709_a_at",162.13728,157.72632,158.50829,161.5627,154.57022,161.22125,0.02041626,-0.019375801,-0.0122413635,0.015294552,-0.048537254,0.01224184,0.96681243,0.8988439,1.0022669,0.0032667208,1.0022669,"up","TBC1D9B",23061.0,"0032313 // regulation of Rab GTPase activity // inferred from electronic annotation /// 0032851 // positive regulation of Rab GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005097 // Rab GTPase activator activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation","chr5:179289065-179334881 (-) // 94.81 // q35.3"]
["11756889_s_at",9.325293,9.422272,9.99678,9.422272,9.159326,9.003763,-0.0074629784,0.007463217,0.0928514,0.007463217,-0.033370733,-0.05808401,0.56836945,0.18284018,1.0417057,0.058947787,1.0417057,"up","SNAP91",9892.0,"0007163 // establishment or maintenance of cell polarity // inferred from electronic annotation /// 0007409 // axonogenesis // inferred from electronic annotation /// 0030100 // regulation of endocytosis // inferred from electronic annotation /// 0048268 // clathrin coat assembly // inferred from electronic annotation /// 0051223 // regulation of protein transport // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0005905 // coated pit // inferred from electronic annotation /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030118 // clathrin coat // inferred from electronic annotation /// 0042734 // presynaptic membrane // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0005543 // phospholipid binding // inferred from electronic annotation /// 0005545 // 1-phosphatidylinositol binding // inferred from electronic annotation /// 0030276 // clathrin binding // inferred from electronic annotation","chr6:84262619-84417677 (-) // 91.64 // q14.2"]
["11733207_a_at",207.01604,192.05786,189.68402,199.02515,207.78468,198.12285,0.060068607,-0.04813242,-0.0660758,0.0032773018,0.06541586,-0.0032777786,0.75725746,0.42653352,-1.0280081,-0.039851636,1.0280081,"down","ZNF480",147657.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:52800420-52826572 (+) // 39.83 // q13.41"]
["11719541_a_at",314.39084,305.93835,289.99918,301.84683,292.74652,318.735,0.049030304,0.009712219,-0.06748009,-0.009712219,-0.053876877,0.06882858,0.978176,0.9296583,-1.0032346,-0.004659046,1.0032346,"down","GCFC1",94104.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation","chr21:34106209-34144173 (-) // 98.03 // q22.11"]
["11755665_x_at",226.93265,219.12364,241.80284,226.54071,217.0407,236.16452,0.0012469292,-0.049271584,0.09281397,-0.0012464523,-0.063051224,0.058775425,0.9240132,0.77350175,1.0116923,0.01677055,1.0116923,"up","VARS2",57176.0,"0006412 // translation // inferred from electronic annotation /// 0006418 // tRNA aminoacylation for protein translation // traceable author statement /// 0006418 // tRNA aminoacylation for protein translation // inferred from electronic annotation /// 0006438 // valyl-tRNA aminoacylation // inferred from electronic annotation /// 0006450 // regulation of translational fidelity // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0002161 // aminoacyl-tRNA editing activity // inferred from electronic annotation /// 0004812 // aminoacyl-tRNA ligase activity // inferred from electronic annotation /// 0004832 // valine-tRNA ligase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation","chr6:30886338-30894233 (+) // 92.82 // p21.33"]
["11728246_at",34.065075,35.508385,33.735325,31.112843,32.02175,33.50969,0.018874168,0.0787406,0.004840851,-0.11190891,-0.07036686,-0.004840851,0.39907488,0.0664089,1.0691943,0.096524075,1.0691943,"up","FAM134A",79137.0,"","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr2:220042938-220050201 (+) // 79.33 // q35"]
["11745944_s_at",225.87395,258.14557,208.65437,238.38121,251.61287,259.1009,-0.1167202,0.07594681,-0.23112297,-0.03896761,0.03896761,0.08127594,0.66169435,0.28850517,-1.0850219,-0.1177241,1.0850219,"down","CHPF",79586.0,"","0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation","0016740 // transferase activity // inferred from electronic annotation /// 0016758 // transferase activity, transferring hexosyl groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047238 // glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity // inferred from electronic annotation /// 0050510 // N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase activity // inferred from electronic annotation","chr2:220404093-220407819 (-) // 99.64 // q35"]
["11740999_a_at",5.8669457,6.6619563,6.2320046,5.8821607,5.323755,6.5566044,-0.045411587,0.13792467,0.04167509,-0.04167509,-0.18557715,0.11492753,0.77916765,0.46421772,1.0586098,0.08217097,1.0586098,"up","GAP43",2596.0,"0007205 // protein kinase C-activating G-protein coupled receptor signaling pathway // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0009611 // response to wounding // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0040008 // regulation of growth // inferred from electronic annotation /// 0051489 // regulation of filopodium assembly // inferred from direct assay","0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0031527 // filopodium membrane // inferred from direct assay /// 0031527 // filopodium membrane // inferred from electronic annotation /// 0032584 // growth cone membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from electronic annotation","chr3:115342150-115440334 (+) // 75.53 // q13.31"]
["11742455_a_at",12.965594,12.440514,11.482343,13.347702,12.512058,13.71687,0.025684595,-0.03395772,-0.14958668,0.067587376,-0.025684595,0.10694766,0.5755811,0.18954283,-1.0734364,-0.10223669,1.0734364,"down","DPF3",8110.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0071565 // nBAF complex // inferred from sequence or structural similarity","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr14:73136659-73360809 (-) // 98.94 // q24.2"]
["11718635_at",574.3338,581.87463,557.6443,512.939,553.0204,519.37396,0.048550606,0.06736946,0.006006241,-0.114551544,-0.006006241,-0.09656525,0.3379277,0.041544255,1.081487,0.113016404,1.081487,"up","KIF1B",23095.0,"0006200 // ATP catabolic process // inferred from sequence or structural similarity /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007018 // microtubule-based movement // inferred from sequence or structural similarity /// 0007018 // microtubule-based movement // inferred from electronic annotation /// 0007270 // neuron-neuron synaptic transmission // inferred from sequence or structural similarity /// 0007270 // neuron-neuron synaptic transmission // inferred from electronic annotation /// 0007274 // neuromuscular synaptic transmission // inferred from sequence or structural similarity /// 0007274 // neuromuscular synaptic transmission // inferred from electronic annotation /// 0008089 // anterograde axon cargo transport // inferred from sequence or structural similarity /// 0008089 // anterograde axon cargo transport // inferred from electronic annotation /// 0030705 // cytoskeleton-dependent intracellular transport // inferred from sequence or structural similarity /// 0030705 // cytoskeleton-dependent intracellular transport // inferred from electronic annotation /// 0047497 // mitochondrion transport along microtubule // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005875 // microtubule associated complex // inferred from sequence or structural similarity /// 0005875 // microtubule associated complex // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from sequence or structural similarity /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from sequence or structural similarity /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043005 // neuron projection // inferred from sequence or structural similarity","0000166 // nucleotide binding // inferred from electronic annotation /// 0003777 // microtubule motor activity // inferred from sequence or structural similarity /// 0003777 // microtubule motor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from sequence or structural similarity /// 0016887 // ATPase activity // inferred from electronic annotation /// 0019894 // kinesin binding // traceable author statement","chr1:10270763-10368652 (+) // 90.43 // p36.22"]
["11738079_at",13.9598465,15.276088,16.20377,16.238373,14.312164,16.240707,-0.1725192,-0.0425272,0.0425272,0.045604706,-0.13656044,0.04581213,0.870596,0.6517437,-1.0298674,-0.04245861,1.0298674,"down","NR2E3",10002.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007601 // visual perception // inferred from electronic annotation /// 0007601 // visual perception // traceable author statement /// 0007602 // phototransduction // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0030522 // intracellular receptor mediated signaling pathway // traceable author statement /// 0043401 // steroid hormone mediated signaling pathway // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003707 // steroid hormone receptor activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004879 // ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr15:72102885-72107270 (+) // 88.82 // q23"]
["11725327_a_at",135.90402,125.94223,128.32507,141.43074,132.48288,135.8637,0.018604279,-0.091220856,-0.064180374,0.07611275,-0.018177032,0.018176556,0.5593697,0.17385249,-1.0504225,-0.07096979,1.0504225,"down","CAMK2D",817.0,"0001558 // regulation of cell growth // non-traceable author statement /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // non-traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0008016 // regulation of heart contraction // traceable author statement /// 0010613 // positive regulation of cardiac muscle hypertrophy // inferred from mutant phenotype /// 0010881 // regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0060314 // regulation of ryanodine-sensitive calcium-release channel activity // traceable author statement /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060341 // regulation of cellular localization // inferred from mutant phenotype","0005654 // nucleoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005954 // calcium- and calmodulin-dependent protein kinase complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016529 // sarcoplasmic reticulum // inferred from electronic annotation /// 0030666 // endocytic vesicle membrane // traceable author statement /// 0033017 // sarcoplasmic reticulum membrane // inferred from electronic annotation /// 0042383 // sarcolemma // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004683 // calmodulin-dependent protein kinase activity // inferred from electronic annotation /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005524 // ATP binding // non-traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr4:114372189-114683202 (-) // 84.34 // q26"]
["11734301_at",13.994048,11.376212,13.464303,12.102817,13.675975,10.45568,0.13257241,-0.16622066,0.07689834,-0.0768981,0.099402666,-0.2879541,0.80696476,0.5164186,1.0739299,0.102899835,1.0739299,"up","MBL2",4153.0,"0001867 // complement activation, lectin pathway // inferred from direct assay /// 0001867 // complement activation, lectin pathway // inferred from physical interaction /// 0001867 // complement activation, lectin pathway // traceable author statement /// 0001867 // complement activation, lectin pathway // inferred from electronic annotation /// 0006953 // acute-phase response // traceable author statement /// 0006956 // complement activation // traceable author statement /// 0006958 // complement activation, classical pathway // inferred from electronic annotation /// 0006979 // response to oxidative stress // non-traceable author statement /// 0008228 // opsonization // traceable author statement /// 0044130 // negative regulation of growth of symbiont in host // inferred from direct assay /// 0044130 // negative regulation of growth of symbiont in host // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation /// 0050766 // positive regulation of phagocytosis // inferred from electronic annotation /// 0050830 // defense response to Gram-positive bacterium // inferred from direct assay /// 0050830 // defense response to Gram-positive bacterium // inferred from electronic annotation /// 0051873 // killing by host of symbiont cells // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005581 // collagen // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement","0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0005537 // mannose binding // non-traceable author statement /// 0005537 // mannose binding // traceable author statement /// 0005537 // mannose binding // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation /// 0043499 // eukaryotic cell surface binding // traceable author statement /// 0048306 // calcium-dependent protein binding // inferred from physical interaction /// 0051635 // bacterial cell surface binding // traceable author statement","chr10:54526872-54531460 (-) // 30.64 // q21.1"]
["11733687_s_at",193.86371,191.75525,200.1677,224.60762,209.26227,208.83928,-0.07675934,-0.092535496,-0.030591965,0.13560486,0.033510685,0.030591965,0.28825644,0.027356563,-1.0967221,-0.13319804,1.0967221,"down","STRA6",64220.0,"0001568 // blood vessel development // inferred from mutant phenotype /// 0001822 // kidney development // inferred from mutant phenotype /// 0003184 // pulmonary valve morphogenesis // inferred from mutant phenotype /// 0003281 // ventricular septum development // inferred from mutant phenotype /// 0006810 // transport // inferred from electronic annotation /// 0007507 // heart development // inferred from mutant phenotype /// 0007612 // learning // inferred from mutant phenotype /// 0007631 // feeding behavior // inferred from mutant phenotype /// 0030324 // lung development // inferred from mutant phenotype /// 0030325 // adrenal gland development // inferred from mutant phenotype /// 0030540 // female genitalia development // inferred from mutant phenotype /// 0042297 // vocal learning // inferred from mutant phenotype /// 0043583 // ear development // inferred from mutant phenotype /// 0043585 // nose morphogenesis // inferred from mutant phenotype /// 0048286 // lung alveolus development // inferred from mutant phenotype /// 0048520 // positive regulation of behavior // inferred from mutant phenotype /// 0048546 // digestive tract morphogenesis // inferred from mutant phenotype /// 0048566 // embryonic digestive tract development // inferred from mutant phenotype /// 0048589 // developmental growth // inferred from mutant phenotype /// 0048745 // smooth muscle tissue development // inferred from mutant phenotype /// 0048844 // artery morphogenesis // inferred from mutant phenotype /// 0050890 // cognition // inferred from mutant phenotype /// 0050905 // neuromuscular process // inferred from mutant phenotype /// 0060322 // head development // inferred from mutant phenotype /// 0060323 // head morphogenesis // inferred from mutant phenotype /// 0060325 // face morphogenesis // inferred from mutant phenotype /// 0060426 // lung vasculature development // inferred from mutant phenotype /// 0060539 // diaphragm development // inferred from mutant phenotype /// 0060900 // embryonic camera-type eye formation // inferred from mutant phenotype /// 0061029 // eyelid development in camera-type eye // inferred from mutant phenotype /// 0061038 // uterus morphogenesis // inferred from mutant phenotype /// 0061143 // alveolar primary septum development // inferred from mutant phenotype /// 0061156 // pulmonary artery morphogenesis // inferred from mutant phenotype /// 0061205 // paramesonephric duct development // inferred from mutant phenotype","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay","0004872 // receptor activity // inferred from electronic annotation","chr15:74471809-74501371 (-) // 98.94 // q24.1"]
["11753634_a_at",34.811207,35.080593,34.366898,33.615704,30.499105,31.340864,0.034474373,0.045595646,0.015942097,-0.015942097,-0.15631056,-0.11703253,0.33206767,0.03962344,1.0931053,0.12843241,1.0931053,"up","MED24",9862.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // inferred from direct assay /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016573 // histone acetylation // inferred from electronic annotation /// 0030518 // intracellular steroid hormone receptor signaling pathway // inferred from direct assay /// 0030521 // androgen receptor signaling pathway // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0051291 // protein heterooligomerization // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0016592 // mediator complex // non-traceable author statement /// 0016592 // mediator complex // inferred from electronic annotation","0001104 // RNA polymerase II transcription cofactor activity // inferred from direct assay /// 0003712 // transcription cofactor activity // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from electronic annotation /// 0004402 // histone acetyltransferase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from direct assay /// 0004872 // receptor activity // inferred from electronic annotation /// 0030374 // ligand-dependent nuclear receptor transcription coactivator activity // non-traceable author statement /// 0042809 // vitamin D receptor binding // non-traceable author statement /// 0046966 // thyroid hormone receptor binding // inferred from direct assay","chr17:38175381-38209868 (-) // 91.84 // q21.1"]
["11749610_a_at",432.31113,427.08728,436.47333,427.67886,421.99768,428.78287,0.013682365,-0.003856659,0.027505875,-0.0018596649,-0.021152496,0.0018596649,0.5496692,0.16648385,1.0136044,0.019494696,1.0136044,"up","CD58",965.0,"0007155 // cell adhesion // non-traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0016337 // cell-cell adhesion // non-traceable author statement /// 0050900 // leukocyte migration // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031225 // anchored to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr1:117064059-117113661 (-) // 97.12 // p13.1"]
["11761354_at",69.04893,64.20738,68.62051,63.511627,65.88448,66.87203,0.056947708,-0.047932148,0.047968864,-0.063649654,-0.010732174,0.010732174,0.72225034,0.37364918,1.0282644,0.04021128,1.0282644,"up","LOC100289409",1.00289409E8,"","","","chr9:140475535-140476950 (+) // 100.0 // q34.3"]
["11763027_x_at",90.178276,101.46091,86.65735,105.36794,108.605675,104.521324,-0.19150877,-0.021436691,-0.2489667,0.033075333,0.076738834,0.021436691,0.35672498,0.048299965,-1.1468852,-0.19772093,1.1468852,"down","HFE",3077.0,"0002474 // antigen processing and presentation of peptide antigen via MHC class I // inferred from electronic annotation /// 0006461 // protein complex assembly // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006826 // iron ion transport // traceable author statement /// 0006879 // cellular iron ion homeostasis // traceable author statement /// 0006898 // receptor-mediated endocytosis // traceable author statement /// 0006955 // immune response // inferred from electronic annotation /// 0007565 // female pregnancy // inferred from electronic annotation /// 0010106 // cellular response to iron ion starvation // inferred from electronic annotation /// 0019882 // antigen processing and presentation // inferred from electronic annotation /// 0042446 // hormone biosynthetic process // inferred from electronic annotation /// 0055072 // iron ion homeostasis // inferred from electronic annotation /// 0060586 // multicellular organismal iron ion homeostasis // inferred from electronic annotation","0005737 // cytoplasm // traceable author statement /// 0005769 // early endosome // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from direct assay /// 0042612 // MHC class I protein complex // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from direct assay /// 0045177 // apical part of cell // inferred from electronic annotation /// 0045178 // basal part of cell // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0055037 // recycling endosome // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr6:26091323-26096817 (+) // 93.73 // p22.2"]
["11740048_a_at",7.407464,6.941108,7.7218075,7.3684797,7.534926,7.122397,0.0038063526,-0.090007305,0.06376529,-0.0038063526,0.028419733,-0.05281043,0.99159604,0.9715413,1.001332,0.0019204554,1.001332,"up","ZNF461",92283.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:37128282-37157755 (-) // 89.38 // q13.12"]
["11723752_s_at",5.8640532,5.7400503,5.9374886,5.7597938,5.340475,5.7406363,0.028284311,-0.002550602,0.0462389,0.0024032593,-0.10664582,-0.0024032593,0.58133227,0.19523232,1.0421331,0.059539538,1.0421331,"up","MEOX2",4223.0,"0001525 // angiogenesis // inferred from electronic annotation /// 0001757 // somite specification // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007519 // skeletal muscle tissue development // inferred from electronic annotation /// 0008015 // blood circulation // traceable author statement /// 0060021 // palate development // inferred from electronic annotation /// 0060173 // limb development // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr7:15650838-15726435 (-) // 96.29 // p21.2"]
["11730786_a_at",123.9492,119.40028,132.84953,126.7553,123.20591,119.80655,0.0043387413,-0.04960394,0.10438299,0.036635876,-0.0043387413,-0.04470396,0.87631047,0.6636217,1.016663,0.023841474,1.016663,"up","KLHL20",27252.0,"0007010 // cytoskeleton organization // traceable author statement /// 0016567 // protein ubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0035455 // response to interferon-alpha // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0009986 // cell surface // inferred from direct assay /// 0015629 // actin cytoskeleton // traceable author statement /// 0016605 // PML body // inferred from direct assay /// 0031463 // Cul3-RING ubiquitin ligase complex // inferred from direct assay /// 0044444 // cytoplasmic part // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0019964 // interferon-gamma binding // inferred from direct assay","chr1:173684051-173755960 (+) // 99.12 // q25.1"]
["11744350_a_at",2583.3403,2571.608,2654.8462,2836.3652,2830.3794,2900.0913,-0.08557415,-0.09214115,-0.046183586,0.04923153,0.046183586,0.08128643,0.11081357,0.0018449062,-1.0969771,-0.13353343,1.0969771,"down","RPS27L",51065.0,"0006281 // DNA repair // inferred from mutant phenotype /// 0006412 // translation // inferred from direct assay /// 0006412 // translation // inferred from electronic annotation /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0006974 // response to DNA damage stimulus // inferred from direct assay /// 0031571 // mitotic cell cycle G1/S transition DNA damage checkpoint // inferred from mutant phenotype /// 0042771 // DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis // inferred from direct assay /// 0045727 // positive regulation of translation // inferred from direct assay /// 0045768 // positive regulation of anti-apoptosis // inferred from mutant phenotype","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005840 // ribosome // inferred from electronic annotation /// 0022627 // cytosolic small ribosomal subunit // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008494 // translation activator activity // inferred from direct assay /// 0008656 // cysteine-type endopeptidase activator activity involved in apoptotic process // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr15:63446051-63449678 (-) // 76.62 // q22.2"]
["11758531_x_at",482.18234,463.693,453.62326,482.77554,465.5502,482.74747,0.025321007,-0.031087875,-0.062763214,0.027094841,-0.025321007,0.027010918,0.7108356,0.35607257,-1.0227392,-0.032438263,1.0227392,"down","GALE",2582.0,"0005975 // carbohydrate metabolic process // traceable author statement /// 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006012 // galactose metabolic process // inferred from electronic annotation /// 0019388 // galactose catabolic process // inferred from direct assay /// 0019388 // galactose catabolic process // traceable author statement /// 0044237 // cellular metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement","0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0003978 // UDP-glucose 4-epimerase activity // not recorded /// 0003978 // UDP-glucose 4-epimerase activity // inferred from direct assay /// 0003978 // UDP-glucose 4-epimerase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation /// 0016857 // racemase and epimerase activity, acting on carbohydrates and derivatives // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0050662 // coenzyme binding // inferred from electronic annotation","chr1:24122099-24122669 (-) // 95.95 // p36.11"]
["11735614_at",13.568731,14.297401,13.811183,13.901073,15.218605,13.557221,-0.03023076,0.04523635,-0.0046799183,0.00467968,0.13531947,-0.03145528,0.8402426,0.5856078,-1.0229527,-0.032739405,1.0229527,"down","EGR4",1961.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:73518061-73520833 (-) // 99.0 // p13.1"]
["11753635_x_at",118.483604,113.52308,111.22524,121.73135,123.64547,116.56337,0.011786461,-0.049915314,-0.07941675,0.050799847,0.073308945,-0.011786461,0.47057694,0.10721687,-1.0545465,-0.07662268,1.0545465,"down","MED24",9862.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // inferred from direct assay /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016573 // histone acetylation // inferred from electronic annotation /// 0030518 // intracellular steroid hormone receptor signaling pathway // inferred from direct assay /// 0030521 // androgen receptor signaling pathway // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0051291 // protein heterooligomerization // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0016592 // mediator complex // non-traceable author statement /// 0016592 // mediator complex // inferred from electronic annotation","0001104 // RNA polymerase II transcription cofactor activity // inferred from direct assay /// 0003712 // transcription cofactor activity // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from electronic annotation /// 0004402 // histone acetyltransferase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from direct assay /// 0004872 // receptor activity // inferred from electronic annotation /// 0030374 // ligand-dependent nuclear receptor transcription coactivator activity // non-traceable author statement /// 0042809 // vitamin D receptor binding // non-traceable author statement /// 0046966 // thyroid hormone receptor binding // inferred from direct assay","chr17:38175381-38209868 (-) // 91.84 // q21.1"]
["11753963_x_at",2502.4895,2517.0044,2613.8076,2415.0923,2488.2344,2389.1985,0.0041208267,0.012464523,0.06690979,-0.047164917,-0.0041208267,-0.062716484,0.40039292,0.06692937,1.0466887,0.06583239,1.0466887,"up","LAMP1",3916.0,"0006914 // autophagy // inferred from electronic annotation /// 0048102 // autophagic cell death // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005764 // lysosome // inferred from direct assay /// 0005764 // lysosome // inferred from electronic annotation /// 0005764 // lysosome // traceable author statement /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from direct assay /// 0005770 // late endosome // inferred from electronic annotation /// 0005771 // multivesicular body // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031982 // vesicle // inferred from electronic annotation /// 0042383 // sarcolemma // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0042599 // lamellar body // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation","","chr13:113951555-113977740 (+) // 94.16 // q34"]
["11747262_s_at",181.63376,163.57678,190.12175,174.3574,164.73293,156.94798,0.09994459,-0.05112028,0.1658349,0.04095936,-0.040959835,-0.1108017,0.61975574,0.2354683,1.0780971,0.10848713,1.0780971,"up","RRAS2",22800.0,"0006184 // GTP catabolic process // traceable author statement /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007265 // Ras protein signal transduction // inferred from electronic annotation /// 0009987 // cellular process // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // non-traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation","chr11:14300227-14386052 (-) // 99.53 // p15.2"]
["11757933_s_at",283.80664,287.00903,286.8461,349.3874,349.98978,364.7724,-0.1580534,-0.14186573,-0.14268494,0.14186573,0.144351,0.2040348,0.052216124,1.2093228E-4,-1.240526,-0.31095192,1.240526,"down","BTG2",7832.0,"0006281 // DNA repair // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006479 // protein methylation // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0008306 // associative learning // inferred from electronic annotation /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0010243 // response to organic nitrogen // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0021542 // dentate gyrus development // inferred from electronic annotation /// 0021954 // central nervous system neuron development // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043434 // response to peptide hormone stimulus // inferred from electronic annotation /// 0045768 // positive regulation of anti-apoptosis // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0051602 // response to electrical stimulus // inferred from electronic annotation /// 0060213 // positive regulation of nuclear-transcribed mRNA poly(A) tail shortening // inferred from direct assay /// 2000178 // negative regulation of neural precursor cell proliferation // inferred from electronic annotation","","0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from electronic annotation","chr1:203278301-203278727 (+) // 98.38 // q32.1"]
["11755047_a_at",628.6017,618.90283,624.9817,605.2072,585.44196,584.04034,0.038575172,0.016141891,0.03024292,-0.016141891,-0.06404495,-0.067502975,0.21347962,0.012140182,1.0552244,0.07754985,1.0552244,"up","NPLOC4",55666.0,"0006944 // cellular membrane fusion // inferred from sequence or structural similarity /// 0006944 // cellular membrane fusion // inferred from electronic annotation /// 0007030 // Golgi organization // inferred from sequence or structural similarity /// 0007030 // Golgi organization // inferred from electronic annotation /// 0030433 // ER-associated protein catabolic process // inferred from sequence or structural similarity /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0042175 // nuclear outer membrane-endoplasmic reticulum membrane network // inferred from sequence or structural similarity","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:79523914-79539134 (-) // 91.87 // q25.3"]
["11718613_a_at",22.469183,20.300474,23.880312,22.196371,24.826141,21.078772,0.008811951,-0.13762236,0.09668589,-0.008811951,0.15272427,-0.08334494,0.9209447,0.76738864,-1.0216473,-0.030897273,1.0216473,"down","ABCD4",5826.0,"0006200 // ATP catabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0055085 // transmembrane transport // non-traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005777 // peroxisome // inferred from direct assay /// 0005777 // peroxisome // inferred from electronic annotation /// 0005778 // peroxisomal membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0043190 // ATP-binding cassette (ABC) transporter complex // non-traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // non-traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0042626 // ATPase activity, coupled to transmembrane movement of substances // non-traceable author statement /// 0042626 // ATPase activity, coupled to transmembrane movement of substances // inferred from electronic annotation","chr14:74751979-74769767 (-) // 94.11 // q24.3"]
["11736184_a_at",6.968552,7.661692,7.250454,7.5486407,8.178121,7.4111238,-0.102095604,0.0347085,-0.04488325,0.013262272,0.1288147,-0.013262272,0.6274984,0.24454486,-1.057283,-0.08036165,1.057283,"down","FSCB",84075.0,"0018105 // peptidyl-serine phosphorylation // inferred from electronic annotation","0005929 // cilium // inferred from electronic annotation /// 0019861 // flagellum // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0044442 // microtubule-based flagellum part // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr14:44973355-44976728 (-) // 99.09 // q21.2"]
["11734390_a_at",26.12616,27.386736,28.954042,24.291887,26.370775,24.262472,-0.0067224503,0.061259747,0.1415472,-0.11174297,0.0067224503,-0.11349106,0.4207673,0.07736428,1.1005301,0.13819866,1.1005301,"up","ABLIM2",84448.0,"0007010 // cytoskeleton organization // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0030016 // myofibril // inferred from electronic annotation /// 0045111 // intermediate filament cytoskeleton // inferred from direct assay","0003779 // actin binding // inferred from electronic annotation /// 0008270 // zinc ion binding // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr4:7967036-8160559 (-) // 96.11 // p16.1"]
["11732037_a_at",324.73877,312.42908,334.48715,326.864,332.51254,300.50458,-0.004705429,-0.060456276,0.037965775,0.004705429,0.029423714,-0.11659813,0.9121542,0.7473036,1.0128527,0.018424332,1.0128527,"up","PTPN12",5782.0,"0006470 // protein dephosphorylation // traceable author statement /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation","0002102 // podosome // inferred from electronic annotation /// 0005625 // soluble fraction // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0030054 // cell junction // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0004726 // non-membrane spanning protein tyrosine phosphatase activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from physical interaction","chr7:77167351-77269388 (+) // 99.01 // q11.23"]
["11730362_a_at",15.927219,18.763958,17.079964,15.780871,19.438702,20.811838,-0.16864038,0.06782961,-0.06782961,-0.18195748,0.1187973,0.2172699,0.7881325,0.4799146,-1.0774219,-0.1075833,1.0774219,"down","KIAA1107",23285.0,"","","","chr1:92632608-92650284 (+) // 98.67 // p22.1"]
["11716191_at",262.07648,262.16138,263.0926,272.29947,271.96487,270.9331,-0.026765823,-0.026298523,-0.021183014,0.028440475,0.026666641,0.021183014,0.044616908,5.8851427E-5,-1.0353935,-0.05017913,1.0353935,"down","C15orf44",81556.0,"","0005737 // cytoplasm // inferred from direct assay","","chr15:65871094-65903486 (-) // 98.53 // q22.31"]
["11742708_a_at",234.43962,232.14186,248.1157,227.62984,231.70738,256.48206,0.0071048737,-0.0071048737,0.08890104,-0.03542137,-0.0098080635,0.1367464,0.9965234,0.98935133,-1.0006046,-8.7203237E-4,1.0006046,"down","P4HTM",54681.0,"0055114 // oxidation-reduction process // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005506 // iron ion binding // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016702 // oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen // inferred from electronic annotation /// 0016705 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen // inferred from electronic annotation /// 0016706 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors // inferred from electronic annotation /// 0031418 // L-ascorbic acid binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:49027340-49044548 (+) // 97.5 // p21.31"]
["11740584_x_at",134.56993,128.78677,123.9694,128.38539,120.6009,125.68669,0.0831995,0.019827843,-0.035171986,0.015324593,-0.074915886,-0.015324593,0.6956197,0.3330498,1.0335373,0.047590412,1.0335373,"up","PACRGL",133015.0,"","","","chr4:20702035-20729979 (+) // 83.56 // p15.31"]
["11740925_a_at",12.209727,11.148604,10.44427,13.500434,11.622261,11.337123,0.0890584,-0.042109728,-0.13626075,0.23403335,0.01791811,-0.01791811,0.7079135,0.3514304,-1.0775702,-0.10778186,1.0775702,"down","FAM151B",167555.0,"","","","chr5:79783799-79838381 (+) // 99.3 // q14.1"]
["11753900_x_at",4707.2114,4592.4995,4864.084,4559.576,4640.33,4462.263,0.028119087,-0.0074739456,0.07541466,-0.017853737,0.0074739456,-0.048978806,0.5305322,0.1489103,1.0365618,0.051806197,1.0365618,"up","MT2A",4502.0,"0006878 // cellular copper ion homeostasis // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0035690 // cellular response to drug // inferred from direct assay /// 0036016 // cellular response to interleukin-3 // inferred from expression pattern /// 0036018 // cellular response to erythropoietin // inferred from expression pattern /// 0045926 // negative regulation of growth // inferred from sequence or structural similarity /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0071294 // cellular response to zinc ion // inferred from expression pattern","0005634 // nucleus // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005829 // cytosol // traceable author statement /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity","0005515 // protein binding // inferred from physical interaction /// 0008144 // drug binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:56642564-56643409 (+) // 79.71 // q12.2"]
["11753591_x_at",1078.6045,1069.2098,1090.545,1088.1227,1122.0511,1111.4219,-0.014279366,-0.026900291,0.0016040802,-0.0016040802,0.042693138,0.028961182,0.42098394,0.07751491,-1.0256524,-0.036541887,1.0256524,"down","PRR13",54458.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","0003723 // RNA binding // inferred from electronic annotation","chr12:53837173-53839992 (+) // 90.77 // q13.13 /// chr19:40448992-40449588 (-) // 93.12 // q13.2"]
["11739141_a_at",21.254818,21.283585,21.756508,21.876524,20.915262,21.913546,-0.017804146,-0.015852928,0.015852928,0.023789406,-0.041038036,0.026228905,0.90708435,0.73481745,-1.0062077,-0.008928142,1.0062077,"down","LILRB5",10990.0,"0006952 // defense response // traceable author statement /// 0007166 // cell surface receptor signaling pathway // traceable author statement","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // traceable author statement","chr19:54754270-54761472 (-) // 87.64 // q13.42"]
["11749804_a_at",8.6436615,7.8850675,6.5124745,7.559379,8.075717,7.062582,0.16294718,0.030427694,-0.2454896,-0.030427694,0.064894915,-0.12849975,0.9753964,0.9211677,1.0097321,0.013972609,1.0097321,"up","CELF6",60677.0,"0000381 // regulation of alternative nuclear mRNA splicing, via spliceosome // inferred from direct assay /// 0006397 // mRNA processing // inferred from electronic annotation","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // non-traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation","chr15:72578245-72598656 (-) // 91.43 // q23"]
["11745984_a_at",999.6476,1055.9353,1020.8552,986.0367,1046.3514,963.9166,-0.0151433945,0.06388664,0.0151433945,-0.034921646,0.050732613,-0.06765461,0.7471202,0.41174424,1.0271001,0.03857677,1.0271001,"up","SRRM1",10250.0,"0000375 // RNA splicing, via transesterification reactions // traceable author statement /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0031124 // mRNA 3'-end processing // traceable author statement","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016363 // nuclear matrix // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation","chr1:24970049-24999158 (+) // 92.44 // p36.11"]
["11763697_s_at",70.74101,73.12865,69.31761,77.29617,71.402504,67.51499,-0.006713867,0.041175842,-0.036038876,0.12113619,0.006713867,-0.074052334,0.92510253,0.77704453,-1.0128764,-0.018458122,1.0128764,"down","SNHG9 /// SNORA78","677844 /// 735301","","","","chr16:2014976-2015505 (+) // 63.57 // p13.3"]
["11715160_x_at",8.150523,7.2933187,7.2533684,7.2050877,7.5150075,8.63841,0.13871765,-0.021599531,-0.02952385,-0.03915906,0.021599531,0.22259068,0.893911,0.70497626,-1.0275052,-0.039145637,1.0275052,"down","LOC650293",650293.0,"0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr4:8951476-8952127 (+) // 100.0 // p16.1 /// chr4:9485511-9486162 (+) // 96.01 // p16.1 /// chr3:129740611-129741262 (-) // 95.39 // q22.1"]
["11763408_x_at",5.0992684,5.2503815,5.36293,5.337552,5.0142937,5.2670636,-0.044420242,-0.0022883415,0.028310776,0.021467686,-0.068664074,0.0022883415,0.93704635,0.81091785,1.0061439,0.008836695,1.0061439,"up","ANKRD36BP2",645784.0,"","","","chr2:89065418-89106133 (+) // 90.38 // p11.2"]
["11740844_s_at",16.191093,17.10921,17.223251,17.929878,15.595419,19.465557,-0.08436489,-0.0047922134,0.0047922134,0.06280041,-0.13844275,0.18135834,0.82477623,0.5513202,-1.0448967,-0.06336035,1.0448967,"down","VWDE",221806.0,"","0005576 // extracellular region // inferred from electronic annotation","","chr7:12370508-12443852 (-) // 100.0 // p21.3"]
["11736577_a_at",100.43278,103.80512,107.19678,112.509674,108.590454,115.70739,-0.10335016,-0.055702686,-0.009317875,0.06046915,0.009317398,0.10090065,0.33537784,0.040766284,-1.0814892,-0.113019265,1.0814892,"down","IRAK1BP1",134728.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007249 // I-kappaB kinase/NF-kappaB cascade // inferred from sequence or structural similarity /// 0007249 // I-kappaB kinase/NF-kappaB cascade // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","","chr6:79577188-79608320 (+) // 97.06 // q14.1"]
["11751497_a_at",59.13563,60.21875,59.13563,57.724922,59.443058,59.181152,-5.555153E-4,0.025629997,-5.555153E-4,-0.03538847,0.006925106,5.5503845E-4,0.6936757,0.33078098,1.0121869,0.017475687,1.0121869,"up","TMEM180",79847.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr10:104221159-104239484 (+) // 96.78 // q24.32"]
["11752223_x_at",109.301476,111.207375,113.07017,114.86594,114.60405,115.66652,-0.05862522,-0.033685684,-0.009719372,0.013012886,0.009719849,0.023033619,0.2927849,0.028383901,-1.0347381,-0.049265604,1.0347381,"down","POLH",5429.0,"0000731 // DNA synthesis involved in DNA repair // inferred from direct assay /// 0006260 // DNA replication // inferred from electronic annotation /// 0006281 // DNA repair // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006282 // regulation of DNA repair // traceable author statement /// 0006290 // pyrimidine dimer repair // inferred from electronic annotation /// 0006301 // postreplication repair // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0010225 // response to UV-C // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003684 // damaged DNA binding // inferred from electronic annotation /// 0003684 // damaged DNA binding // traceable author statement /// 0003887 // DNA-directed DNA polymerase activity // inferred from electronic annotation /// 0003887 // DNA-directed DNA polymerase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016779 // nucleotidyltransferase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:43543921-43582460 (+) // 95.21 // p21.1"]
["11730140_at",7.083348,8.840742,7.6676555,7.271048,9.135919,8.991759,-0.2170453,0.102690935,-0.10269117,-0.17931342,0.15007305,0.1271267,0.79763174,0.49936154,-1.0754775,-0.10497732,1.0754775,"down","LGALS13",29124.0,"0006644 // phospholipid metabolic process // traceable author statement /// 0016042 // lipid catabolic process // inferred from electronic annotation","","0004091 // carboxylesterase activity // inferred from electronic annotation /// 0004622 // lysophospholipase activity // inferred from electronic annotation /// 0004622 // lysophospholipase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr19:40093159-40098114 (+) // 92.5 // q13.2"]
["11728581_at",13.478939,14.286166,14.283598,16.337866,16.679777,14.487973,-0.09403038,-0.0101184845,-0.0103776455,0.18348217,0.2133627,0.0101184845,0.39836428,0.06601903,-1.1280491,-0.17382991,1.1280491,"down","ZNF497",162968.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:58865722-58874120 (-) // 78.05 // q13.43"]
["11727219_a_at",133.47107,142.18169,147.0444,128.37407,140.19438,136.25363,-0.050334454,0.040874004,0.08939028,-0.10650778,0.02056694,-0.020567417,0.68978983,0.32542557,1.0440176,0.062145967,1.0440176,"up","DSE",29940.0,"0006334 // nucleosome assembly // inferred from electronic annotation /// 0015012 // heparan sulfate proteoglycan biosynthetic process // inferred from electronic annotation /// 0030206 // chondroitin sulfate biosynthetic process // inferred from electronic annotation /// 0030208 // dermatan sulfate biosynthetic process // inferred from direct assay","0005622 // intracellular // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0016853 // isomerase activity // inferred from electronic annotation /// 0047757 // chondroitin-glucuronate 5-epimerase activity // inferred from direct assay /// 0047757 // chondroitin-glucuronate 5-epimerase activity // inferred from electronic annotation","chr6:116601233-116759879 (+) // 96.85 // q22.1"]
["11753964_x_at",2008.4324,2003.8519,2061.1128,1924.7594,1999.7075,1927.423,0.004787445,0.001493454,0.04214096,-0.056604385,-0.001493454,-0.0546093,0.41324762,0.073347814,1.0379304,0.05370966,1.0379304,"up","HSPH1",10808.0,"0006950 // response to stress // inferred from electronic annotation /// 0006986 // response to unfolded protein // traceable author statement /// 0045345 // positive regulation of MHC class I biosynthetic process // traceable author statement /// 0051085 // chaperone mediated protein folding requiring cofactor // inferred from electronic annotation /// 0051135 // positive regulation of NK T cell activation // traceable author statement","0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0043014 // alpha-tubulin binding // inferred from electronic annotation","chr13:31710764-31736525 (-) // 99.66 // q12.3"]
["11755549_a_at",27.86811,25.949686,26.551702,26.049507,29.090532,30.002386,0.034905434,-0.06799269,-0.034905434,-0.062453747,0.096839905,0.14136744,0.67374104,0.3036741,-1.0579333,-0.081248716,1.0579333,"down","SEMA6D",80031.0,"0006501 // C-terminal protein lipidation // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0016254 // preassembly of GPI anchor in ER membrane // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0030215 // semaphorin receptor binding // inferred from electronic annotation","chr15:48058309-48064407 (+) // 99.51 // q21.1"]
["11726007_s_at",5.7764945,5.254433,5.296971,5.1774535,6.0119658,6.2338014,0.06251335,-0.074145794,-0.06251335,-0.09543824,0.12015581,0.17243123,0.7299049,0.3855476,-1.0646886,-0.09043148,1.0646886,"down","DPY19L2 /// DPY19L2P1","283417 /// 554236","0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0007286 // spermatid development // inferred from mutant phenotype /// 0030154 // cell differentiation // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr12:63952692-64062417 (-) // 98.71 // q14.2"]
["11755604_x_at",12860.487,13018.554,13358.974,12874.777,12946.209,12840.711,-0.005592346,0.012031555,0.049271584,-0.003991127,0.0039920807,-0.0078125,0.6465459,0.26971808,1.014785,0.021174172,1.014785,"up","RPL7A /// SNORD24 /// SNORD36A /// SNORD36B","26814 /// 26815 /// 26820 /// 6130","0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral infectious cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0042254 // ribosome biogenesis // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement","0005624 // membrane fraction // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0042788 // polysomal ribosome // inferred from direct assay","0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0003735 // structural constituent of ribosome // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr9:136216864-136218280 (+) // 97.01 // q34.2 /// chr14:70351998-70352485 (-) // 88.25 // q24.2 /// chr18:36914780-36915264 (-) // 88.05 // q12.2"]
["11717101_a_at",200.72507,202.30913,210.54074,254.33115,220.17633,244.37411,-0.10115862,-0.089818,-0.032280445,0.24032879,0.03227997,0.18271208,0.28397498,0.026077751,-1.1697439,-0.2261927,1.1697439,"down","SLC38A1",81539.0,"0001504 // neurotransmitter uptake // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006811 // ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0006865 // amino acid transport // traceable author statement /// 0006865 // amino acid transport // inferred from electronic annotation /// 0006868 // glutamine transport // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0015804 // neutral amino acid transport // non-traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0005624 // membrane fraction // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation","0005283 // sodium:amino acid symporter activity // non-traceable author statement /// 0015175 // neutral amino acid transmembrane transporter activity // non-traceable author statement /// 0015186 // L-glutamine transmembrane transporter activity // inferred from electronic annotation /// 0015293 // symporter activity // inferred from electronic annotation","chr12:46576837-46663220 (-) // 93.32 // q13.11"]
["11746469_x_at",393.87433,389.13885,403.14078,380.43384,389.0946,370.77274,0.017532349,8.201599E-5,0.051080704,-0.032557487,-8.201599E-5,-0.069667816,0.43458274,0.085303664,1.0403008,0.057000805,1.0403008,"up","DARS",1615.0,"0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006418 // tRNA aminoacylation for protein translation // traceable author statement /// 0006418 // tRNA aminoacylation for protein translation // inferred from electronic annotation /// 0006422 // aspartyl-tRNA aminoacylation // inferred from electronic annotation /// 0006422 // aspartyl-tRNA aminoacylation // traceable author statement /// 0006461 // protein complex assembly // traceable author statement /// 0010467 // gene expression // traceable author statement","0005625 // soluble fraction // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0004046 // aminoacylase activity // traceable author statement /// 0004812 // aminoacyl-tRNA ligase activity // inferred from electronic annotation /// 0004815 // aspartate-tRNA ligase activity // inferred from electronic annotation /// 0004815 // aspartate-tRNA ligase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation","chr2:136664253-136743117 (-) // 92.94 // q21.3"]
["11730223_a_at",48.995872,60.706757,52.05722,65.663605,54.28285,63.755344,-0.2285161,0.08068037,-0.141078,0.19391823,-0.08067989,0.15137005,0.6029874,0.21544944,-1.1364288,-0.18450734,1.1364288,"down","PNPLA2",57104.0,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0010891 // negative regulation of sequestering of triglyceride // inferred from direct assay /// 0010891 // negative regulation of sequestering of triglyceride // inferred from electronic annotation /// 0010898 // positive regulation of triglyceride catabolic process // inferred from direct assay /// 0010898 // positive regulation of triglyceride catabolic process // inferred from electronic annotation /// 0016042 // lipid catabolic process // inferred from electronic annotation /// 0019433 // triglyceride catabolic process // inferred from electronic annotation","0005811 // lipid particle // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004806 // triglyceride lipase activity // inferred from sequence or structural similarity /// 0004806 // triglyceride lipase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0050253 // retinyl-palmitate esterase activity // inferred from electronic annotation","chr11:818900-825573 (+) // 97.51 // p15.5"]
["11747504_a_at",30.823017,28.942293,35.733124,35.102272,37.908417,33.110706,-0.14542294,-0.23625183,0.06783104,0.04213333,0.15308714,-0.04213333,0.60450363,0.21728843,-1.1139184,-0.15564358,1.1139184,"down","ZNF510",22869.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:99520365-99540398 (-) // 91.69 // q22.33"]
["11754660_a_at",10.344461,9.204551,8.409479,9.1518755,9.098832,10.26629,0.17257929,0.0041399,-0.1261909,-0.0041401386,-0.012526035,0.16163564,0.92465127,0.77599764,-1.0220604,-0.031480446,1.0220604,"down","GOLT1A",127845.0,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr1:204167290-204183110 (-) // 93.22 // q32.1"]
["11736487_at",15.981151,15.317417,14.816475,16.401903,15.313803,14.060267,0.061368465,1.7023087E-4,-0.04780054,0.0988605,-1.7023087E-4,-0.12337875,0.95679444,0.86676145,1.0089179,0.01280882,1.0089179,"up","RASGEF1B",153020.0,"0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from electronic annotation","0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005088 // Ras guanyl-nucleotide exchange factor activity // inferred from direct assay","chr4:82348176-82393069 (-) // 98.93 // q21.21"]
["11741817_a_at",6.2009816,6.107617,6.3460894,6.0100236,6.888524,6.3126106,-0.012870073,-0.034757137,0.020501137,-0.057996035,0.13882828,0.012870073,0.8172942,0.5372476,-1.0283107,-0.040276174,1.0283107,"down","SLC12A5",57468.0,"0006810 // transport // non-traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006811 // ion transport // inferred from electronic annotation /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0006821 // chloride transport // inferred from electronic annotation /// 0006873 // cellular ion homeostasis // non-traceable author statement /// 0007268 // synaptic transmission // inferred from electronic annotation /// 0007612 // learning // inferred from electronic annotation /// 0015696 // ammonium transport // inferred from electronic annotation /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0040040 // thermosensory behavior // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0051452 // intracellular pH reduction // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0032590 // dendrite membrane // inferred from electronic annotation /// 0043204 // perikaryon // inferred from electronic annotation","0015293 // symporter activity // inferred from electronic annotation /// 0015377 // cation:chloride symporter activity // inferred from electronic annotation /// 0015379 // potassium:chloride symporter activity // inferred from electronic annotation /// 0015379 // potassium:chloride symporter activity // non-traceable author statement /// 0051739 // ammonia transmembrane transporter activity // inferred from electronic annotation","chr20:44650328-44688789 (+) // 98.22 // q13.12"]
["11731253_a_at",945.85,922.46594,984.6064,869.5182,867.83685,852.6226,0.07875538,0.042639732,0.1366911,-0.042639732,-0.04543209,-0.0709486,0.1842613,0.00851269,1.1011688,0.13903557,1.1011688,"up","C16orf13",84326.0,"","","","chr16:684429-686366 (-) // 85.2 // p13.3"]
["11758045_s_at",263.83084,272.29117,282.10138,252.69214,259.1576,252.89224,0.012891769,0.058428764,0.1094923,-0.0493412,-0.012891769,-0.048199177,0.31000346,0.032967847,1.0696076,0.09708164,1.0696076,"up","KIAA1804",84451.0,"0000165 // MAPK cascade // inferred from electronic annotation /// 0000186 // activation of MAPKK activity // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from sequence or structural similarity /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007257 // activation of JUN kinase activity // inferred from sequence or structural similarity /// 0016310 // phosphorylation // inferred from electronic annotation /// 0046777 // protein autophosphorylation // inferred from sequence or structural similarity","","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004709 // MAP kinase kinase kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from sequence or structural similarity","chr1:233520499-233521070 (+) // 98.95 // q42.2"]
["11743422_a_at",103.46448,98.12391,107.44039,96.08392,98.15346,99.739944,0.06445837,-0.012000561,0.11885929,-0.042310715,-0.011566162,0.011566162,0.54174614,0.1577129,1.050597,0.071209304,1.050597,"up","BAG4",9530.0,"0006457 // protein folding // traceable author statement /// 0006916 // anti-apoptosis // traceable author statement /// 0010763 // positive regulation of fibroblast migration // inferred from electronic annotation /// 0030838 // positive regulation of actin filament polymerization // inferred from electronic annotation /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from electronic annotation /// 0045785 // positive regulation of cell adhesion // inferred from electronic annotation /// 0051496 // positive regulation of stress fiber assembly // inferred from electronic annotation /// 0051897 // positive regulation of protein kinase B signaling cascade // inferred from electronic annotation /// 0071356 // cellular response to tumor necrosis factor // inferred from direct assay /// 0071364 // cellular response to epidermal growth factor stimulus // inferred from electronic annotation /// 0072659 // protein localization in plasma membrane // inferred from electronic annotation /// 0097178 // ruffle assembly // inferred from electronic annotation /// 2001145 // negative regulation of phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay","0005057 // receptor signaling protein activity // traceable author statement /// 0051087 // chaperone binding // inferred from electronic annotation","chr8:38034105-38070819 (+) // 83.7 // p11.23"]
["11734486_a_at",8.918379,9.809445,8.005754,8.12327,9.276913,7.6790495,0.0673604,0.20475054,-0.088383675,-0.0673604,0.12422371,-0.14849329,0.78703237,0.47687197,1.0656885,0.09178579,1.0656885,"up","WFDC8",90199.0,"0010466 // negative regulation of peptidase activity // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation","chr20:44180400-44207965 (-) // 81.89 // q13.12"]
["11726849_at",6.1705503,5.7236137,6.1935167,6.029457,5.7490253,6.2848544,0.016685486,-0.09178734,0.022045135,-0.016685486,-0.08539629,0.043165684,0.9918982,0.97209835,1.0013547,0.0019530882,1.0013547,"up","SHC4",399694.0,"0035556 // intracellular signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0019904 // protein domain specific binding // inferred from electronic annotation /// 0030971 // receptor tyrosine kinase binding // inferred from electronic annotation","chr15:49115931-49255662 (-) // 95.64 // q21.1"]
["11722718_a_at",82.19285,81.91408,79.54071,72.50341,79.5745,83.832886,0.025804043,0.020902634,-0.021514893,-0.15515947,-0.020902157,0.054307938,0.7887473,0.4808013,1.0345346,0.04898186,1.0345346,"up","BAIAP2",10458.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007409 // axonogenesis // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0009617 // response to bacterium // inferred from mutant phenotype /// 0016358 // dendrite development // inferred from electronic annotation /// 0032956 // regulation of actin cytoskeleton organization // inferred from mutant phenotype /// 0046847 // filopodium assembly // inferred from electronic annotation /// 0048167 // regulation of synaptic plasticity // inferred from electronic annotation /// 0051017 // actin filament bundle assembly // inferred from electronic annotation","0001726 // ruffle // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from direct assay /// 0030175 // filopodium // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // traceable author statement /// 0008093 // cytoskeletal adaptor activity // inferred from electronic annotation /// 0008093 // cytoskeletal adaptor activity // traceable author statement /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0070064 // proline-rich region binding // inferred from direct assay","chr17:79008946-79084378 (+) // 98.74 // q25.3"]
["11751529_a_at",17.009314,18.993961,18.812918,18.5312,18.671982,18.481571,-0.12909079,0.030125141,0.01630783,-0.0054593086,0.0054593086,-0.009328365,0.8737949,0.6574866,-1.017087,-0.024443066,1.017087,"down","TF",7018.0,"0002576 // platelet degranulation // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006826 // iron ion transport // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // traceable author statement /// 0006879 // cellular iron ion homeostasis // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0033572 // transferrin transport // traceable author statement /// 0055072 // iron ion homeostasis // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005769 // early endosome // inferred from direct assay /// 0005770 // late endosome // inferred from direct assay /// 0005905 // coated pit // inferred from direct assay /// 0009925 // basal plasma membrane // inferred from direct assay /// 0010008 // endosome membrane // traceable author statement /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from direct assay /// 0016324 // apical plasma membrane // inferred from direct assay /// 0030139 // endocytic vesicle // inferred from direct assay /// 0030141 // secretory granule // traceable author statement /// 0045178 // basal part of cell // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0055037 // recycling endosome // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008199 // ferric iron binding // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:133465076-133474655 (+) // 98.02 // q22.1"]
["11748428_a_at",129.7284,136.16666,140.22052,124.20732,131.7019,129.57597,-0.010890961,0.05898857,0.10131264,-0.07363415,0.010890961,-0.012586594,0.5236023,0.1438183,1.0532978,0.07491333,1.0532978,"up","PGS1",9489.0,"0006655 // phosphatidylglycerol biosynthetic process // inferred from sequence or structural similarity /// 0006655 // phosphatidylglycerol biosynthetic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008654 // phospholipid biosynthetic process // inferred from electronic annotation /// 0032049 // cardiolipin biosynthetic process // inferred from sequence or structural similarity /// 0046339 // diacylglycerol metabolic process // inferred from sequence or structural similarity","0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from sequence or structural similarity /// 0005524 // ATP binding // inferred from electronic annotation /// 0008444 // CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity // inferred from sequence or structural similarity /// 0008444 // CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016780 // phosphotransferase activity, for other substituted phosphate groups // inferred from electronic annotation","chr17:76374742-76420638 (+) // 95.23 // q25.3"]
["11730053_a_at",7.6482687,8.22043,8.25748,7.563959,8.397341,7.481946,-0.05204034,0.0520401,0.058528185,-0.06803179,0.08275914,-0.08376002,0.8204862,0.5430137,1.0299114,0.04252023,1.0299114,"up","SNX16",64089.0,"0006622 // protein targeting to lysosome // inferred from mutant phenotype /// 0006810 // transport // inferred from electronic annotation /// 0007154 // cell communication // inferred from electronic annotation /// 0008333 // endosome to lysosome transport // inferred from mutant phenotype /// 0015031 // protein transport // inferred from electronic annotation /// 0045022 // early endosome to late endosome transport // inferred from mutant phenotype","0005737 // cytoplasm // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0005770 // late endosome // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0031313 // extrinsic to endosome membrane // inferred from direct assay /// 0031901 // early endosome membrane // inferred from electronic annotation /// 0031902 // late endosome membrane // inferred from electronic annotation","0008289 // lipid binding // inferred from electronic annotation /// 0035091 // phosphatidylinositol binding // inferred from direct assay /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction","chr8:82711819-82754534 (-) // 97.34 // q21.13"]
["11728943_at",6.3322325,6.1758366,6.0233045,6.595867,6.1758366,5.829712,0.036079645,0.0,-0.036079407,0.09492779,0.0,-0.08320999,0.9847063,0.9472888,-1.002711,-0.003905937,1.002711,"down","ZNF404",342908.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:44376514-44384355 (-) // 94.06 // q13.31"]
["11736931_s_at",414.97107,409.9744,419.4976,300.5151,293.3672,355.9236,0.119460106,0.10198307,0.13511181,-0.3461132,-0.38084316,-0.10198307,0.20468429,0.011012797,1.315093,0.39516488,1.315093,"up","FAM72A /// FAM72B /// FAM72D","653820 /// 728833 /// 729533","","","","chr1:206138454-206155147 (+) // 96.15 // q32.1 /// chr1:120838982-120855680 (+) // 95.74 // p11.2 /// chr1:143896451-143913145 (-) // 95.7 // q21.1"]
["11727185_at",33.457233,31.17651,25.98776,31.267704,28.16194,29.387447,0.14448833,0.04262972,-0.2199974,0.04684353,-0.10408306,-0.04262972,0.95321304,0.8580364,1.0155983,0.02232988,1.0155983,"up","CCDC164",92749.0,"","","","chr2:26624779-26679579 (+) // 92.46 // p23.3"]
["11742191_a_at",69.49877,64.20734,67.75987,74.36458,65.57369,70.87399,0.018278122,-0.09597111,-0.018278599,0.11590576,-0.06559229,0.04654646,0.71570444,0.36320525,-1.045561,-0.06427717,1.045561,"down","LOC100506403 /// RUNX1","100506403 /// 861","0001501 // skeletal system development // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0002318 // myeloid progenitor cell differentiation // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007417 // central nervous system development // inferred from electronic annotation /// 0009966 // regulation of signal transduction // inferred from electronic annotation /// 0030097 // hemopoiesis // inferred from direct assay /// 0030097 // hemopoiesis // traceable author statement /// 0030099 // myeloid cell differentiation // inferred from direct assay /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0030853 // negative regulation of granulocyte differentiation // inferred from mutant phenotype /// 0030854 // positive regulation of granulocyte differentiation // inferred from mutant phenotype /// 0031069 // hair follicle morphogenesis // inferred from electronic annotation /// 0035162 // embryonic hemopoiesis // inferred from electronic annotation /// 0045766 // positive regulation of angiogenesis // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048266 // behavioral response to pain // inferred from electronic annotation /// 0048666 // neuron development // inferred from electronic annotation /// 0048935 // peripheral nervous system neuron development // traceable author statement /// 0060216 // definitive hemopoiesis // inferred from electronic annotation /// 0071336 // regulation of hair follicle cell proliferation // inferred from electronic annotation /// 0071425 // hemopoietic stem cell proliferation // traceable author statement","0005604 // basement membrane // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0000975 // regulatory region DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // non-traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from direct assay /// 0070491 // repressing transcription factor binding // inferred from electronic annotation","chr21:36160097-36421595 (-) // 94.77 // q22.12"]
["11718505_s_at",1783.5408,1749.5405,1845.1466,1807.8423,1770.4341,1766.7981,0.005320549,-0.022447586,0.054311752,0.024845123,-0.005320549,-0.008286476,0.91120696,0.7449619,1.0060129,0.008648829,1.0060129,"up","SRSF10",10772.0,"0000244 // assembly of spliceosomal tri-snRNP // non-traceable author statement /// 0000375 // RNA splicing, via transesterification reactions // inferred from direct assay /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006376 // mRNA splice site selection // inferred from direct assay /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // non-traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0016482 // cytoplasmic transport // inferred from direct assay /// 0048025 // negative regulation of nuclear mRNA splicing, via spliceosome // inferred from direct assay","0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // non-traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0050733 // RS domain binding // non-traceable author statement /// 0051082 // unfolded protein binding // non-traceable author statement","chr1:24290836-24306885 (-) // 85.86 // p36.11 /// chr1_gl000191_random:34172-50213 (-) // 85.84 //"]
["11745642_at",7.0055065,7.6461315,7.856343,6.996107,7.3965464,6.74008,-0.039181232,0.087059736,0.12618732,-0.041118145,0.03918147,-0.0949049,0.6125039,0.22688688,1.0645933,0.09030241,1.0645933,"up",-0.041118145,0.03918147,-0.0949049,-0.039181232,0.087059736,0.12618732]
["11723900_a_at",133.74712,143.42996,126.53822,116.88303,101.199005,115.42657,0.13718891,0.23802757,0.057253838,-0.05725336,-0.26512384,-0.075344086,0.30167732,0.030744886,1.2114464,0.27673057,1.2114464,"up","KIAA2018",205717.0,"","0005634 // nucleus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0004571 // mannosyl-oligosaccharide 1,2-alpha-mannosidase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation","chr3:113367231-113415493 (-) // 92.86 // q13.2"]
["11740912_a_at",11.366433,13.03708,11.62656,11.484221,11.350754,12.223491,-0.023759127,0.17408204,0.008885622,-0.008885622,-0.025750637,0.08111763,0.85542005,0.6181412,1.0263877,0.037575774,1.0263877,"up","BANK1",55024.0,"0042113 // B cell activation // inferred from electronic annotation","","","chr4:102711763-102995967 (+) // 96.99 // q24"]
["11750271_a_at",23.266281,24.002228,21.335415,23.048506,25.858982,24.554777,-0.022463799,0.022463799,-0.14745426,-0.036031246,0.12996101,0.055299282,0.61587447,0.23011509,-1.0709524,-0.09889438,1.0709524,"down","PANX2",56666.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0007267 // cell-cell signaling // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0034214 // protein hexamerization // inferred from sequence or structural similarity","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005921 // gap junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005243 // gap junction channel activity // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0055077 // gap junction hemi-channel activity // inferred from sequence or structural similarity","chr22:50609189-50618032 (+) // 99.6 // q13.33"]
["11755858_a_at",5.409652,5.9000363,6.5882916,5.6388407,5.803119,6.1166024,-0.11324024,0.011947632,0.17112827,-0.05337763,-0.011947632,0.06395435,0.93449366,0.803254,1.0165883,0.023735575,1.0165883,"up","MS4A1",931.0,"0006955 // immune response // traceable author statement /// 0042113 // B cell activation // inferred from electronic annotation","0005730 // nucleolus // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005154 // epidermal growth factor receptor binding // inferred from electronic annotation","chr11:60223319-60237529 (+) // 88.88 // q12.2"]
["11720548_at",170.07126,168.42625,160.20117,131.99026,147.16502,139.49239,0.14747953,0.13345766,0.061224937,-0.21822834,-0.061224937,-0.13847303,0.18460888,0.008552203,1.1919823,0.25336277,1.1919823,"up","HNRNPUL2",221092.0,"","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation","chr11:62481387-62494933 (-) // 93.64 // q12.3"]
["11742751_a_at",11.653907,13.789216,13.314745,13.864459,11.912797,13.271407,-0.18985939,0.052867413,0.0023515224,0.060718298,-0.15816092,-0.0023517609,0.9721287,0.9117972,-1.0080837,-0.011615431,1.0080837,"down","ITIH3",3699.0,"0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // traceable author statement /// 0030212 // hyaluronan metabolic process // inferred from electronic annotation","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation","0004866 // endopeptidase inhibitor activity // traceable author statement /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation","chr3:52828809-52843025 (+) // 98.85 // p21.1"]
["11745143_a_at",51.747665,54.044857,60.207386,51.69614,41.554287,46.09986,7.185936E-4,0.06338215,0.21916533,-7.185936E-4,-0.31577778,-0.16601276,0.4330421,0.08446316,1.1935495,0.2552584,1.1935495,"up","SYNE2",23224.0,"0006998 // nuclear envelope organization // inferred from electronic annotation /// 0007097 // nuclear migration // inferred from mutant phenotype /// 0007163 // establishment or maintenance of cell polarity // inferred from electronic annotation /// 0010761 // fibroblast migration // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from sequence or structural similarity /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0031022 // nuclear migration along microfilament // inferred from sequence or structural similarity /// 0031022 // nuclear migration along microfilament // inferred from electronic annotation /// 0034504 // protein localization to nucleus // inferred from electronic annotation /// 0051642 // centrosome localization // inferred from mutant phenotype /// 0051642 // centrosome localization // inferred from electronic annotation /// 0090286 // cytoskeletal anchoring at nuclear membrane // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from direct assay /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005640 // nuclear outer membrane // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016529 // sarcoplasmic reticulum // inferred from direct assay /// 0016529 // sarcoplasmic reticulum // inferred from electronic annotation /// 0030016 // myofibril // inferred from electronic annotation /// 0030018 // Z disc // inferred from direct assay /// 0030018 // Z disc // inferred from electronic annotation /// 0031258 // lamellipodium membrane // inferred from direct assay /// 0031527 // filopodium membrane // inferred from direct assay /// 0031965 // nuclear membrane // inferred from direct assay /// 0031981 // nuclear lumen // inferred from direct assay /// 0033017 // sarcoplasmic reticulum membrane // inferred from electronic annotation /// 0034993 // SUN-KASH complex // inferred from direct assay /// 0044429 // mitochondrial part // inferred from direct assay","0003779 // actin binding // inferred from electronic annotation /// 0003779 // actin binding // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction","chr14:64319709-64427595 (+) // 82.41 // q23.2"]
["11743159_x_at",6.361098,5.906504,6.593925,6.124597,6.1661625,5.863579,0.0497818,-0.057189465,0.10164356,-0.004878998,0.004878998,-0.067712545,0.71255,0.35784626,1.038127,0.053982873,1.038127,"up","FGG",2266.0,"0002576 // platelet degranulation // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0007596 // blood coagulation // inferred from electronic annotation /// 0007599 // hemostasis // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0030168 // platelet activation // inferred from electronic annotation /// 0051258 // protein polymerization // inferred from electronic annotation /// 0051592 // response to calcium ion // inferred from direct assay","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005577 // fibrinogen complex // inferred from electronic annotation /// 0005577 // fibrinogen complex // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005938 // cell cortex // inferred from electronic annotation /// 0009897 // external side of plasma membrane // inferred from direct assay /// 0031091 // platelet alpha granule // inferred from direct assay /// 0031093 // platelet alpha granule lumen // traceable author statement","0005102 // receptor binding // inferred from electronic annotation /// 0030674 // protein binding, bridging // inferred from electronic annotation /// 0043499 // eukaryotic cell surface binding // inferred from direct assay","chr4:155525732-155533902 (-) // 99.55 // q31.3"]
["11757377_a_at",9.243813,9.676172,10.434866,9.61632,10.040711,7.9499187,-0.061472654,0.004475832,0.11337948,-0.004475832,0.057828903,-0.2790208,0.77721566,0.46079078,1.0673378,0.094016775,1.0673378,"up","DNAH14",127602.0,"0007018 // microtubule-based movement // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0030286 // dynein complex // inferred from electronic annotation /// 0035085 // cilium axoneme // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003774 // motor activity // inferred from electronic annotation /// 0003777 // microtubule motor activity // inferred from electronic annotation /// 0003777 // microtubule motor activity // non-traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation","chr1:225576157-225587057 (+) // 93.16 // q42.12"]
["11758516_s_at",108.109795,108.76747,118.85123,105.652435,109.88779,113.54064,-0.016141891,-0.0073919296,0.12051773,-0.04931307,0.0073919296,0.054570198,0.8597406,0.6264851,1.0196766,0.028111612,1.0196766,"up","PTCD3",55037.0,"","0005739 // mitochondrion // inferred from electronic annotation","","chr2:86366899-86367349 (+) // 91.56 // p11.2"]
["11718336_x_at",15.317237,15.784995,12.78418,12.487693,16.16774,13.859477,0.07214165,0.11553955,-0.1886549,-0.22250748,0.15010357,-0.07214165,0.9160225,0.75632554,1.0337285,0.047857296,1.0337285,"up","LMOD1",25802.0,"0006936 // muscle contraction // traceable author statement","0005624 // membrane fraction // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0005523 // tropomyosin binding // inferred from electronic annotation","chr1:201865583-201915792 (-) // 90.85 // q32.1"]
["11733406_a_at",60.54087,66.39533,59.654877,67.37681,66.68734,61.71955,-0.08049536,0.052677155,-0.10176468,0.073847294,0.05900812,-0.05267763,0.6913635,0.3271964,-1.0496587,-0.06992025,1.0496587,"down","CLDN19",149461.0,"0007601 // visual perception // inferred from electronic annotation /// 0016338 // calcium-independent cell-cell adhesion // inferred from sequence or structural similarity /// 0019227 // neuronal action potential propagation // inferred from electronic annotation /// 0043297 // apical junction assembly // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005923 // tight junction // inferred from direct assay /// 0005923 // tight junction // inferred from sequence or structural similarity /// 0005923 // tight junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from direct assay /// 0030054 // cell junction // inferred from electronic annotation /// 0043296 // apical junction complex // inferred from direct assay","0005198 // structural molecule activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from sequence or structural similarity","chr1:43198760-43205925 (-) // 85.88 // p34.2"]
["11756280_a_at",952.2074,928.16547,957.73737,927.1549,907.42944,924.1456,0.037679672,7.8582764E-4,0.04603386,-7.8582764E-4,-0.03181076,-0.005475998,0.41312322,0.073238835,1.0287249,0.04085724,1.0287249,"up","NUDT5",11164.0,"0006139 // nucleobase-containing compound metabolic process // inferred from electronic annotation /// 0009117 // nucleotide metabolic process // non-traceable author statement /// 0009191 // ribonucleoside diphosphate catabolic process // inferred from direct assay /// 0009191 // ribonucleoside diphosphate catabolic process // traceable author statement /// 0019303 // D-ribose catabolic process // non-traceable author statement","0005622 // intracellular // non-traceable author statement","0000287 // magnesium ion binding // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0017110 // nucleoside-diphosphatase activity // inferred from electronic annotation /// 0019144 // ADP-sugar diphosphatase activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047631 // ADP-ribose diphosphatase activity // inferred from electronic annotation","chr10:12209628-12238128 (-) // 99.47 // p13"]
["11739892_a_at",85.37399,99.03013,83.0866,100.04065,97.77142,96.03325,-0.18267679,0.031394005,-0.22185802,0.04604101,0.012939453,-0.012939453,0.54174614,0.15775448,-1.1016968,-0.1397273,1.1016968,"down","ARPC4-TTLL3 /// TTLL3","100526693 /// 26140","0006464 // cellular protein modification process // inferred from electronic annotation /// 0018094 // protein polyglycylation // inferred from direct assay /// 0030041 // actin filament polymerization // inferred from electronic annotation /// 0035082 // axoneme assembly // inferred from sequence or structural similarity /// 0042384 // cilium assembly // inferred from sequence or structural similarity","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005929 // cilium // inferred from sequence or structural similarity /// 0005929 // cilium // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from sequence or structural similarity /// 0035085 // cilium axoneme // inferred from sequence or structural similarity /// 0035085 // cilium axoneme // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0004835 // tubulin-tyrosine ligase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0070735 // protein-glycine ligase activity // inferred from direct assay /// 0070736 // protein-glycine ligase activity, initiating // inferred from sequence or structural similarity","chr3:9851671-9878042 (+) // 84.87 // p25.3"]
["11750735_a_at",17.980095,17.882265,21.370478,18.63879,17.16874,20.17585,-0.02595377,-0.03382492,0.2232647,0.02595377,-0.092570305,0.140275,0.9313555,0.7951639,1.0209714,0.029942477,1.0209714,"up","COMP",1311.0,"0001501 // skeletal system development // traceable author statement /// 0003417 // growth plate cartilage development // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from direct assay /// 0007155 // cell adhesion // inferred from electronic annotation /// 0009887 // organ morphogenesis // traceable author statement /// 0060173 // limb development // inferred from direct assay","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0031012 // extracellular matrix // inferred from direct assay","0005201 // extracellular matrix structural constituent // traceable author statement /// 0005509 // calcium ion binding // inferred from direct assay /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005509 // calcium ion binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005518 // collagen binding // inferred from direct assay /// 0008201 // heparin binding // inferred from direct assay /// 0008201 // heparin binding // inferred from electronic annotation /// 0043395 // heparan sulfate proteoglycan binding // inferred from direct assay","chr19:18893583-18902114 (-) // 99.83 // p13.11"]
["11740044_x_at",225.04613,213.98402,221.458,210.84631,227.09036,203.49721,0.047952652,-0.024765015,0.024765015,-0.046076298,0.060997963,-0.097259045,0.76688415,0.4450707,1.0305611,0.043430027,1.0305611,"up","MTFMT",123263.0,"0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred from electronic annotation /// 0009058 // biosynthetic process // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation /// 0071951 // conversion of methionyl-tRNA to N-formyl-methionyl-tRNA // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004479 // methionyl-tRNA formyltransferase activity // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016742 // hydroxymethyl-, formyl- and related transferase activity // inferred from electronic annotation","chr15:65293850-65321976 (-) // 65.72 // q22.31"]
["11732704_a_at",101.54072,98.62779,97.15015,97.68237,107.36301,97.01666,0.04894066,0.006947994,-0.014829636,-0.0069475174,0.12937927,-0.016813755,0.88857806,0.6933486,-1.0150281,-0.021519694,1.0150281,"down","FGFRL1",53834.0,"0001501 // skeletal system development // inferred from electronic annotation /// 0001558 // regulation of cell growth // non-traceable author statement /// 0003179 // heart valve morphogenesis // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from direct assay /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from electronic annotation /// 0060412 // ventricular septum morphogenesis // inferred from electronic annotation /// 0060539 // diaphragm development // inferred from electronic annotation","0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005007 // fibroblast growth factor-activated receptor activity // inferred from direct assay /// 0005007 // fibroblast growth factor-activated receptor activity // inferred from electronic annotation /// 0008201 // heparin binding // inferred from direct assay /// 0017134 // fibroblast growth factor binding // inferred from electronic annotation","chr4:1004939-1020686 (+) // 78.35 // p16.3"]
["11729412_x_at",379.0166,381.45166,412.98328,384.87402,370.6752,360.9934,-0.0046195984,0.0046195984,0.119202614,0.017505646,-0.036725044,-0.07490826,0.59979516,0.21266939,1.0505247,0.0711101,1.0505247,"up","C9orf142",286257.0,"","","","chr9:139886894-139888439 (+) // 85.3 // q34.3"]
["11751166_a_at",16.98532,17.551676,14.935107,16.191639,17.60973,15.005691,0.034519672,0.08184004,-0.15106106,-0.034519672,0.08660412,-0.14425898,0.9513713,0.8537311,1.0133677,0.019157683,1.0133677,"up","TRIM5",85363.0,"0009615 // response to virus // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0070206 // protein trimerization // inferred from direct assay","0000932 // cytoplasmic mRNA processing body // inferred from direct assay /// 0000932 // cytoplasmic mRNA processing body // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:5686479-5701462 (-) // 80.7 // p15.4"]
["11730283_at",12.394724,12.2998905,12.2679825,13.987456,13.371123,12.334278,0.0035264492,-0.0075540543,-0.0113015175,0.17793417,0.11292124,-0.0035262108,0.5053623,0.13114399,-1.0724319,-0.10088607,1.0724319,"down","SMU1",55234.0,"","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","","chr9:33041761-33076718 (-) // 77.43 // p21.1"]
["11742022_s_at",9.813831,8.409993,7.395538,8.237992,7.5923977,7.0493855,0.3113923,0.088680506,-0.096769094,0.05886841,-0.05886841,-0.1659267,0.6781242,0.3100467,1.1145104,0.1564101,1.1145104,"up","IKZF1",10320.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001779 // natural killer cell differentiation // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007498 // mesoderm development // traceable author statement /// 0016568 // chromatin modification // inferred from electronic annotation /// 0030097 // hemopoiesis // inferred from electronic annotation /// 0030183 // B cell differentiation // inferred from electronic annotation /// 0030217 // T cell differentiation // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation /// 0040018 // positive regulation of multicellular organism growth // inferred from electronic annotation /// 0045660 // positive regulation of neutrophil differentiation // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048535 // lymph node development // inferred from electronic annotation /// 0048538 // thymus development // inferred from electronic annotation /// 0048541 // Peyer's patch development // inferred from electronic annotation /// 0048732 // gland development // inferred from electronic annotation /// 0051138 // positive regulation of NK T cell differentiation // inferred from electronic annotation /// 0060041 // retina development in camera-type eye // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005721 // centromeric heterochromatin // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr7:50344377-50472799 (+) // 96.31 // p12.2"]
["11732579_s_at",6.7648306,7.377711,6.8574653,7.0071607,8.232829,6.3398786,-0.035198927,0.08992052,-0.015577316,0.015577316,0.24813557,-0.12879753,0.932181,0.7975854,-1.0223744,-0.031923603,1.0223744,"down","ZNF880",400713.0,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:52873179-52889048 (+) // 98.09 // q13.41"]
["11715166_at",160.18884,156.23299,170.2286,152.55385,162.3043,159.61626,0.002583027,-0.03349161,0.09028292,-0.06787205,0.021510124,-0.002583027,0.7833983,0.4712126,1.0253428,0.03610635,1.0253428,"up","DNAJC12",56521.0,"0006457 // protein folding // inferred from electronic annotation","","0031072 // heat shock protein binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // inferred from electronic annotation","chr10:69570967-69597937 (-) // 99.11 // q21.3"]
["11743546_a_at",340.24652,319.4587,342.96848,319.8807,320.84976,316.44458,0.08686447,-0.0040864944,0.09836006,-0.0021820068,0.0021820068,-0.017763138,0.48370215,0.114628546,1.0470283,0.066300444,1.0470283,"up","MYO1B",4430.0,"0030048 // actin filament-based movement // inferred from sequence or structural similarity /// 0051017 // actin filament bundle assembly // inferred from sequence or structural similarity","0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005903 // brush border // inferred from sequence or structural similarity /// 0005903 // brush border // inferred from electronic annotation /// 0016459 // myosin complex // inferred from electronic annotation /// 0030175 // filopodium // inferred from sequence or structural similarity /// 0071944 // cell periphery // inferred from sequence or structural similarity","0000146 // microfilament motor activity // inferred from sequence or structural similarity /// 0000166 // nucleotide binding // inferred from electronic annotation /// 0003774 // motor activity // inferred from electronic annotation /// 0003779 // actin binding // inferred from electronic annotation /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from sequence or structural similarity /// 0005524 // ATP binding // inferred from electronic annotation /// 0005546 // phosphatidylinositol-4,5-bisphosphate binding // inferred from sequence or structural similarity /// 0005547 // phosphatidylinositol-3,4,5-trisphosphate binding // inferred from sequence or structural similarity","chr2:192110125-192290102 (+) // 96.44 // q32.3"]
["11734935_a_at",115.47434,102.55015,102.301735,121.137535,119.42038,115.111496,0.0022702217,-0.16897249,-0.17247105,0.0713439,0.050746918,-0.0022702217,0.40312898,0.06823367,-1.1118776,-0.15299793,1.1118776,"down","ARID5A",10865.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement","chr2:97202463-97218370 (+) // 96.4 // q11.2"]
["11753333_x_at",515.346,530.0284,518.43,498.3204,507.06363,495.9976,0.011687279,0.052215576,0.020295143,-0.036780357,-0.011687279,-0.043520927,0.2575234,0.020014824,1.0415477,0.05872885,1.0415477,"up","RTN3",10313.0,"0006810 // transport // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0071786 // endoplasmic reticulum tubular network organization // inferred from mutant phenotype","0000139 // Golgi membrane // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr11:63448971-63526015 (+) // 100.0 // q13.1 /// chr4:146296557-146297750 (+) // 96.88 // q31.21"]
["11750568_a_at",7.1129823,8.193279,7.3750777,7.1965075,7.581538,6.9250255,-0.03452301,0.1694634,0.017680645,-0.017680645,0.057513,-0.073158264,0.7628801,0.43755758,1.0438992,0.06198238,1.0438992,"up","SALL1",6299.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001657 // ureteric bud development // inferred from sequence or structural similarity /// 0001657 // ureteric bud development // inferred from electronic annotation /// 0001658 // branching involved in ureteric bud morphogenesis // inferred from sequence or structural similarity /// 0001822 // kidney development // inferred from mutant phenotype /// 0001843 // neural tube closure // inferred from electronic annotation /// 0003281 // ventricular septum development // inferred from sequence or structural similarity /// 0003281 // ventricular septum development // inferred from electronic annotation /// 0003337 // mesenchymal to epithelial transition involved in metanephros morphogenesis // inferred from expression pattern /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007507 // heart development // inferred from mutant phenotype /// 0008406 // gonad development // inferred from expression pattern /// 0016575 // histone deacetylation // inferred from sequence or structural similarity /// 0021553 // olfactory nerve development // inferred from sequence or structural similarity /// 0021553 // olfactory nerve development // inferred from electronic annotation /// 0021772 // olfactory bulb development // inferred from electronic annotation /// 0021889 // olfactory bulb interneuron differentiation // inferred from sequence or structural similarity /// 0021915 // neural tube development // inferred from electronic annotation /// 0021983 // pituitary gland development // inferred from expression pattern /// 0030177 // positive regulation of Wnt receptor signaling pathway // inferred from direct assay /// 0030325 // adrenal gland development // inferred from expression pattern /// 0031129 // inductive cell-cell signaling // inferred from sequence or structural similarity /// 0031129 // inductive cell-cell signaling // inferred from electronic annotation /// 0035136 // forelimb morphogenesis // inferred from electronic annotation /// 0035137 // hindlimb morphogenesis // inferred from electronic annotation /// 0042473 // outer ear morphogenesis // inferred from mutant phenotype /// 0042733 // embryonic digit morphogenesis // inferred from mutant phenotype /// 0045666 // positive regulation of neuron differentiation // inferred from electronic annotation /// 0045879 // negative regulation of smoothened signaling pathway // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048566 // embryonic digestive tract development // inferred from mutant phenotype /// 0060173 // limb development // inferred from mutant phenotype /// 0061034 // olfactory bulb mitral cell layer development // inferred from mutant phenotype /// 0072073 // kidney epithelium development // inferred from sequence or structural similarity /// 0072092 // ureteric bud invasion // inferred from sequence or structural similarity /// 0072092 // ureteric bud invasion // inferred from electronic annotation /// 2000177 // regulation of neural precursor cell proliferation // inferred from electronic annotation","0000792 // heterochromatin // inferred from direct assay /// 0000792 // heterochromatin // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0010369 // chromocenter // inferred from direct assay /// 0016581 // NuRD complex // inferred from sequence or structural similarity /// 0016581 // NuRD complex // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0004407 // histone deacetylase activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0008013 // beta-catenin binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:51170584-51185181 (-) // 98.92 // q12.1"]
["11735343_at",10.308692,10.775071,9.971556,10.426197,9.971556,9.604205,0.023985386,0.08782148,-0.023985386,0.040337086,-0.023985386,-0.078137636,0.70729285,0.34967288,1.035171,0.04986915,1.035171,"up","SOX3",6658.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007417 // central nervous system development // traceable author statement /// 0007423 // sensory organ development // inferred from sequence or structural similarity /// 0007423 // sensory organ development // inferred from electronic annotation /// 0007530 // sex determination // inferred from mutant phenotype /// 0007530 // sex determination // inferred from electronic annotation /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0021854 // hypothalamus development // inferred from sequence or structural similarity /// 0021854 // hypothalamus development // inferred from electronic annotation /// 0021983 // pituitary gland development // inferred from sequence or structural similarity /// 0021983 // pituitary gland development // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation /// 0045665 // negative regulation of neuron differentiation // inferred from sequence or structural similarity /// 0048515 // spermatid differentiation // inferred from electronic annotation /// 0060009 // Sertoli cell development // inferred from electronic annotation /// 0060324 // face development // inferred from sequence or structural similarity /// 0060324 // face development // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0000979 // RNA polymerase II core promoter sequence-specific DNA binding // inferred from sequence or structural similarity /// 0000979 // RNA polymerase II core promoter sequence-specific DNA binding // inferred from electronic annotation /// 0001106 // RNA polymerase II transcription corepressor activity // inferred from sequence or structural similarity /// 0001106 // RNA polymerase II transcription corepressor activity // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation","chrX:139585151-139587281 (-) // 87.4 // q27.1"]
["11727453_a_at",551.0408,560.17285,554.2992,539.05914,528.9853,529.4009,0.015857697,0.03957081,0.024363518,-0.015857697,-0.043073654,-0.04194069,0.16464989,0.0059206393,1.0426257,0.060221277,1.0426257,"up","C17orf79",55352.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0043985 // histone H4-R3 methylation // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0042393 // histone binding // inferred from direct assay","chr17:30178883-30186356 (-) // 89.87 // q11.2"]
["11750768_a_at",21.169397,25.391062,20.89193,21.998903,24.728762,22.10574,-0.058946133,0.20339441,-0.07798052,-0.0034947395,0.16526365,0.0034947395,0.92317784,0.77199686,-1.0230892,-0.032931894,1.0230892,"down","OSBPL6",114880.0,"0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // inferred from electronic annotation","","0005543 // phospholipid binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation","chr2:179059226-179247502 (+) // 98.97 // q31.2"]
["11730575_at",9.199784,9.451697,8.672855,10.053362,9.758177,10.128817,-0.061992407,-0.023019075,-0.14708567,0.066013575,0.023019075,0.07680106,0.29791987,0.029819129,-1.0963007,-0.1326436,1.0963007,"down","ZNF470",388566.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:57078879-57094261 (+) // 67.41 // q13.43"]
["11716820_x_at",15.130233,11.129786,12.150473,11.502039,9.400888,11.514675,0.39475226,-0.04825616,0.078330755,-7.920265E-4,-0.29181266,7.920265E-4,0.6050232,0.21840164,1.180076,0.23887977,1.180076,"up","PRSS1",5644.0,"0006508 // proteolysis // inferred from electronic annotation /// 0006508 // proteolysis // inferred from direct assay /// 0007586 // digestion // inferred from electronic annotation /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0030307 // positive regulation of cell growth // traceable author statement /// 0030574 // collagen catabolic process // inferred from direct assay /// 0030574 // collagen catabolic process // inferred from mutant phenotype /// 0045087 // innate immune response // traceable author statement /// 0045785 // positive regulation of cell adhesion // traceable author statement","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005576 // extracellular region // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005615 // extracellular space // inferred from mutant phenotype /// 0031012 // extracellular matrix // traceable author statement","0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // traceable author statement /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from direct assay /// 0005509 // calcium ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:142457317-142460922 (+) // 96.33 // q34"]
["11720929_a_at",148.85893,150.20735,163.45161,134.81027,131.50482,134.8951,0.071053505,0.08406305,0.20597124,-0.07196236,-0.10777664,-0.07105398,0.1998938,0.01026684,1.151856,0.2039603,1.151856,"up","DLST",1743.0,"0006091 // generation of precursor metabolites and energy // traceable author statement /// 0006099 // tricarboxylic acid cycle // traceable author statement /// 0006099 // tricarboxylic acid cycle // inferred from electronic annotation /// 0006103 // 2-oxoglutarate metabolic process // inferred from electronic annotation /// 0006554 // lysine catabolic process // traceable author statement /// 0006734 // NADH metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0033512 // L-lysine catabolic process to acetyl-CoA via saccharopine // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement /// 0005792 // microsome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0045252 // oxoglutarate dehydrogenase complex // inferred from electronic annotation","0004149 // dihydrolipoyllysine-residue succinyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0031072 // heat shock protein binding // inferred from electronic annotation /// 0051087 // chaperone binding // inferred from electronic annotation","chr14:75348595-75370443 (+) // 98.64 // q24.3"]
["11762503_at",10.373595,11.442311,10.606807,10.94781,11.107495,10.669446,-0.059147835,0.08231473,-0.027073383,0.018578291,0.03946972,-0.01857853,0.92188096,0.7692953,-1.0100724,-0.014458635,1.0100724,"down","GPR126",57211.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007218 // neuropeptide signaling pathway // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement","chr6:142726824-142764664 (+) // 65.95 // q24.1"]
["11728191_x_at",145.0258,138.55446,143.43831,116.46598,114.9074,108.20538,0.19112873,0.12527227,0.17524958,-0.12527227,-0.14470863,-0.2314086,0.08927132,9.745126E-4,1.2578967,0.3310134,1.2578967,"up","CXCR4",7852.0,"0000187 // activation of MAPK activity // traceable author statement /// 0001569 // patterning of blood vessels // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from expression pattern /// 0001667 // ameboidal cell migration // inferred from electronic annotation /// 0001764 // neuron migration // inferred from electronic annotation /// 0002407 // dendritic cell chemotaxis // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006954 // inflammatory response // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from direct assay /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007204 // elevation of cytosolic calcium ion concentration // traceable author statement /// 0007281 // germ cell development // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0008045 // motor axon guidance // inferred from electronic annotation /// 0008354 // germ cell migration // inferred from electronic annotation /// 0009615 // response to virus // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0019059 // initiation of viral infection // traceable author statement /// 0019722 // calcium-mediated signaling // inferred from mutant phenotype /// 0030260 // entry into host cell // traceable author statement /// 0030334 // regulation of cell migration // inferred from electronic annotation /// 0042098 // T cell proliferation // inferred from electronic annotation /// 0043217 // myelin maintenance // inferred from sequence or structural similarity /// 0043217 // myelin maintenance // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0048699 // generation of neurons // inferred from electronic annotation /// 0048714 // positive regulation of oligodendrocyte differentiation // inferred from sequence or structural similarity /// 0048714 // positive regulation of oligodendrocyte differentiation // inferred from electronic annotation /// 0050920 // regulation of chemotaxis // inferred from mutant phenotype /// 0061351 // neural precursor cell proliferation // inferred from electronic annotation /// 0070098 // chemokine-mediated signaling pathway // inferred from electronic annotation","0005737 // cytoplasm // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from direct assay /// 0030426 // growth cone // inferred from electronic annotation /// 0031252 // cell leading edge // inferred from direct assay /// 0031410 // cytoplasmic vesicle // inferred from direct assay","0003779 // actin binding // inferred from direct assay /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004950 // chemokine receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0015026 // coreceptor activity // traceable author statement /// 0016494 // C-X-C chemokine receptor activity // non-traceable author statement /// 0016494 // C-X-C chemokine receptor activity // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0032027 // myosin light chain binding // inferred from direct assay /// 0043130 // ubiquitin binding // inferred from direct assay","chr2:136871919-136874273 (-) // 97.21 // q22.1"]
["11718698_at",198.02988,179.79399,167.39804,188.34753,189.51627,198.63434,0.067858696,-0.07151461,-0.17457628,-0.004462242,0.004462242,0.07225561,0.68843853,0.3240213,-1.0595825,-0.083495885,1.0595825,"down","C6orf89",221477.0,"0042060 // wound healing // inferred from direct assay /// 0045787 // positive regulation of cell cycle // inferred from direct assay /// 0050673 // epithelial cell proliferation // inferred from direct assay","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr6:36853685-36896740 (+) // 91.22 // p21.2"]
["11726188_at",5.2662454,5.8547926,5.659262,5.817129,5.8485065,6.267356,-0.14741302,0.0054302216,-0.043573856,-0.0038805008,0.0038805008,0.10366917,0.54840577,0.16503191,-1.0691087,-0.096408576,1.0691087,"down","SHISA3",152573.0,"0007275 // multicellular organismal development // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr4:42399798-42404504 (+) // 98.45 // p13"]
["11751074_x_at",398.2797,412.97235,425.38715,384.6337,383.87396,387.11404,0.020511627,0.07277489,0.11550617,-0.029785156,-0.032637596,-0.020511627,0.27839342,0.024691647,1.0697268,0.09724242,1.0697268,"up","ARHGDIA",396.0,"0006916 // anti-apoptosis // traceable author statement /// 0006928 // cellular component movement // traceable author statement /// 0007162 // negative regulation of cell adhesion // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007266 // Rho protein signal transduction // inferred from electronic annotation /// 0007266 // Rho protein signal transduction // traceable author statement /// 0032880 // regulation of protein localization // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0050770 // regulation of axonogenesis // traceable author statement /// 0050771 // negative regulation of axonogenesis // traceable author statement /// 0050772 // positive regulation of axonogenesis // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0001772 // immunological synapse // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // traceable author statement","0005094 // Rho GDP-dissociation inhibitor activity // inferred from electronic annotation /// 0005094 // Rho GDP-dissociation inhibitor activity // traceable author statement /// 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr17:79825672-79829252 (-) // 97.3 // q25.3"]
["11729181_at",32.56751,30.096699,32.63533,37.686073,35.72213,31.735762,-0.0015006065,-0.11532879,0.0015006065,0.20909739,0.1318841,-0.03882456,0.55170923,0.16781923,-1.1012652,-0.13916191,1.1012652,"down","DHRSX",207063.0,"0008152 // metabolic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0000228 // nuclear chromosome // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0004803 // transposase activity // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation","chrX:2137546-2419015 (-) // 80.53 // p22.33 /// chrY:2087546-2369015 (-) // 80.53 // p11.32"]
["11721278_s_at",616.83044,642.3744,672.7606,604.0529,587.4686,597.182,0.015099525,0.07363987,0.14031887,-0.015099525,-0.055262566,-0.031603813,0.34382248,0.043968823,1.0794836,0.11034136,1.0794836,"up","SUV39H1",6839.0,"0000183 // chromatin silencing at rDNA // inferred from direct assay /// 0006325 // chromatin organization // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006364 // rRNA processing // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0016571 // histone methylation // inferred from direct assay /// 0030154 // cell differentiation // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation /// 0034968 // histone lysine methylation // inferred from direct assay /// 0034968 // histone lysine methylation // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0051567 // histone H3-K9 methylation // inferred from direct assay /// 0051567 // histone H3-K9 methylation // inferred from electronic annotation","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000792 // heterochromatin // inferred from direct assay /// 0000792 // heterochromatin // inferred from electronic annotation /// 0000794 // condensed nuclear chromosome // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005677 // chromatin silencing complex // inferred from direct assay /// 0005677 // chromatin silencing complex // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0033553 // rDNA heterochromatin // inferred from direct assay","0003682 // chromatin binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008757 // S-adenosylmethionine-dependent methyltransferase activity // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation /// 0018024 // histone-lysine N-methyltransferase activity // inferred from direct assay /// 0018024 // histone-lysine N-methyltransferase activity // inferred from electronic annotation /// 0042054 // histone methyltransferase activity // inferred from direct assay /// 0046974 // histone methyltransferase activity (H3-K9 specific) // inferred from direct assay /// 0046974 // histone methyltransferase activity (H3-K9 specific) // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from physical interaction","chrX:48554923-48567407 (+) // 89.98 // p11.23"]
["11751556_a_at",40.095764,42.296413,45.252666,48.872433,37.969055,46.04445,-0.1258192,-0.04873371,0.04873371,0.15975189,-0.20444489,0.073758125,0.88795346,0.6914687,-1.0364339,-0.051628157,1.0364339,"down","NUDT13",25961.0,"","0005739 // mitochondrion // inferred from electronic annotation","0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr10:74870279-74890700 (+) // 99.91 // q22.1"]
["11715105_at",7.2991586,7.5157576,7.7449474,7.8855457,7.8228874,7.2748904,-0.06385684,-0.021668434,0.021668434,0.047623873,0.036114216,-0.06866145,0.84040195,0.585942,-1.0184048,-0.026311183,1.0184048,"down","C17orf78",284099.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr17:35732984-35749660 (+) // 98.15 // q12"]
["11740848_a_at",6.379543,5.942835,5.509489,6.0969763,6.598412,6.4841323,0.032679796,-0.06962204,-0.1788547,-0.032679558,0.08134556,0.056140184,0.5891152,0.20251393,-1.0768876,-0.106867686,1.0768876,"down","SLC30A10",55532.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // inferred from electronic annotation /// 0006829 // zinc ion transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008324 // cation transmembrane transporter activity // inferred from electronic annotation","chr1:220087605-220101993 (-) // 98.26 // q41"]
["11731270_a_at",9.387606,8.236855,8.239017,8.60413,10.049979,7.7371182,0.15700698,-0.03165698,-0.03127837,0.03127861,0.2553699,-0.1219542,0.9545219,0.8612077,-1.0164511,-0.02354084,1.0164511,"down","MGAM",8972.0,"0005975 // carbohydrate metabolic process // traceable author statement /// 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0005983 // starch catabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0044245 // polysaccharide digestion // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation","0003824 // catalytic activity // traceable author statement /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004339 // glucan 1,4-alpha-glucosidase activity // inferred from electronic annotation /// 0004553 // hydrolase activity, hydrolyzing O-glycosyl compounds // inferred from electronic annotation /// 0004558 // alpha-glucosidase activity // traceable author statement /// 0004558 // alpha-glucosidase activity // inferred from electronic annotation /// 0016160 // amylase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity, acting on glycosyl bonds // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation /// 0032450 // maltose alpha-glucosidase activity // inferred from electronic annotation","chr7:141607612-141806547 (+) // 99.51 // q34"]
["11716332_a_at",318.69287,298.5531,325.88712,333.394,328.04068,330.3078,-0.036956787,-0.13113594,-0.0047512054,0.028104782,0.0047512054,0.014687538,0.5030683,0.12915146,-1.0522391,-0.07346251,1.0522391,"down","RPL28",6158.0,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral infectious cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr19:55896712-55903460 (+) // 74.45 // q13.42"]
["11735095_at",6.868033,7.1048517,6.0950856,8.073002,7.24459,7.1433496,-0.052805662,-0.0038981438,-0.22505617,0.18040252,0.024201393,0.0038979053,0.51013404,0.13426808,-1.1199393,-0.16342057,1.1199393,"down","LEP",3952.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001542 // ovulation from ovarian follicle // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001819 // positive regulation of cytokine production // inferred from electronic annotation /// 0001890 // placenta development // inferred from direct assay /// 0001932 // regulation of protein phosphorylation // inferred from electronic annotation /// 0002021 // response to dietary excess // inferred from electronic annotation /// 0006006 // glucose metabolic process // inferred from electronic annotation /// 0006111 // regulation of gluconeogenesis // inferred from electronic annotation /// 0006112 // energy reserve metabolic process // inferred from electronic annotation /// 0006112 // energy reserve metabolic process // traceable author statement /// 0006114 // glycerol biosynthetic process // inferred from electronic annotation /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007260 // tyrosine phosphorylation of STAT protein // inferred from electronic annotation /// 0007565 // female pregnancy // inferred from electronic annotation /// 0007584 // response to nutrient // inferred from electronic annotation /// 0007623 // circadian rhythm // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // inferred from electronic annotation /// 0008206 // bile acid metabolic process // inferred from electronic annotation /// 0008217 // regulation of blood pressure // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008343 // adult feeding behavior // inferred from sequence or structural similarity /// 0008343 // adult feeding behavior // inferred from electronic annotation /// 0009062 // fatty acid catabolic process // inferred from electronic annotation /// 0009892 // negative regulation of metabolic process // inferred from electronic annotation /// 0019222 // regulation of metabolic process // inferred from electronic annotation /// 0021954 // central nervous system neuron development // inferred from electronic annotation /// 0030073 // insulin secretion // inferred from electronic annotation /// 0030300 // regulation of intestinal cholesterol absorption // inferred from electronic annotation /// 0032099 // negative regulation of appetite // inferred from sequence or structural similarity /// 0032099 // negative regulation of appetite // inferred from electronic annotation /// 0032868 // response to insulin stimulus // inferred from electronic annotation /// 0033197 // response to vitamin E // inferred from electronic annotation /// 0033210 // leptin-mediated signaling pathway // inferred from electronic annotation /// 0033686 // positive regulation of luteinizing hormone secretion // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0035630 // bone mineralization involved in bone maturation // inferred from electronic annotation /// 0042307 // positive regulation of protein import into nucleus // inferred from electronic annotation /// 0042445 // hormone metabolic process // inferred from electronic annotation /// 0042517 // positive regulation of tyrosine phosphorylation of Stat3 protein // inferred from electronic annotation /// 0042755 // eating behavior // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043270 // positive regulation of ion transport // inferred from electronic annotation /// 0043410 // positive regulation of MAPK cascade // inferred from electronic annotation /// 0045639 // positive regulation of myeloid cell differentiation // inferred from electronic annotation /// 0045906 // negative regulation of vasoconstriction // inferred from electronic annotation /// 0046427 // positive regulation of JAK-STAT cascade // inferred from electronic annotation /// 0046628 // positive regulation of insulin receptor signaling pathway // inferred from electronic annotation /// 0046881 // positive regulation of follicle-stimulating hormone secretion // inferred from electronic annotation /// 0048639 // positive regulation of developmental growth // inferred from direct assay /// 0050796 // regulation of insulin secretion // inferred from electronic annotation /// 0050810 // regulation of steroid biosynthetic process // inferred from electronic annotation /// 0050867 // positive regulation of cell activation // inferred from electronic annotation /// 0050901 // leukocyte tethering or rolling // inferred from electronic annotation /// 0051956 // negative regulation of amino acid transport // inferred from electronic annotation /// 0060587 // regulation of lipoprotein lipid oxidation // inferred from electronic annotation /// 0060612 // adipose tissue development // inferred from electronic annotation /// 0061037 // negative regulation of cartilage development // inferred from electronic annotation /// 0070093 // negative regulation of glucagon secretion // inferred from electronic annotation /// 0071298 // cellular response to L-ascorbic acid // inferred from electronic annotation /// 0071300 // cellular response to retinoic acid // inferred from electronic annotation /// 2000366 // positive regulation of STAT protein import into nucleus // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from sequence or structural similarity /// 0005615 // extracellular space // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0005622 // intracellular // inferred from electronic annotation","0005179 // hormone activity // inferred from electronic annotation /// 0008083 // growth factor activity // inferred from electronic annotation /// 0051428 // peptide hormone receptor binding // inferred from electronic annotation","chr7:127892041-127897681 (+) // 82.25 // q32.1"]
["11721154_a_at",82.63925,86.241325,95.430016,96.64739,101.70735,85.04069,-0.13458395,-0.0730319,0.0730319,0.09131956,0.16494036,-0.093257904,0.72052205,0.37056407,-1.0711758,-0.09919529,1.0711758,"down","STK3",6788.0,"0001841 // neural tube formation // inferred from electronic annotation /// 0003157 // endocardium development // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007243 // intracellular protein kinase cascade // inferred from direct assay /// 0007417 // central nervous system development // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0035329 // hippo signaling cascade // inferred from direct assay /// 0035329 // hippo signaling cascade // traceable author statement /// 0035329 // hippo signaling cascade // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from sequence or structural similarity /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0046621 // negative regulation of organ growth // inferred from electronic annotation /// 0060215 // primitive hemopoiesis // inferred from electronic annotation /// 0060706 // cell differentiation involved in embryonic placenta development // inferred from electronic annotation /// 0071902 // positive regulation of protein serine/threonine kinase activity // inferred from direct assay /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from mutant phenotype /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // not recorded /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0043539 // protein serine/threonine kinase activator activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from sequence or structural similarity","chr8:99466860-99837950 (-) // 97.39 // q22.2"]
["11761389_at",11.027776,10.966584,10.170557,12.11941,12.5042715,11.210663,-0.011864901,-0.019892454,-0.12860823,0.12431264,0.16941428,0.011864901,0.38764152,0.06104282,-1.113668,-0.15531917,1.113668,"down","CD3G",917.0,"0006461 // protein complex assembly // non-traceable author statement /// 0007163 // establishment or maintenance of cell polarity // inferred from mutant phenotype /// 0007166 // cell surface receptor signaling pathway // inferred from mutant phenotype /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0015031 // protein transport // inferred from mutant phenotype /// 0031295 // T cell costimulation // traceable author statement /// 0042110 // T cell activation // non-traceable author statement /// 0042981 // regulation of apoptotic process // inferred from mutant phenotype /// 0050776 // regulation of immune response // traceable author statement /// 0050852 // T cell receptor signaling pathway // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0042101 // T cell receptor complex // non-traceable author statement /// 0042105 // alpha-beta T cell receptor complex // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from mutant phenotype /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0030159 // receptor signaling complex scaffold activity // non-traceable author statement /// 0042608 // T cell receptor binding // non-traceable author statement /// 0046982 // protein heterodimerization activity // inferred from physical interaction","chr11:118215058-118220913 (+) // 84.62 // q23.3"]
["11733691_a_at",7.566263,7.4724436,6.364534,7.2467284,6.877259,6.865741,0.09999919,0.08199835,-0.14952683,0.0377481,-0.0377481,-0.040166378,0.92878723,0.78825164,1.0169244,0.024212403,1.0169244,"up","SIGLEC7",27036.0,"0007155 // cell adhesion // inferred from electronic annotation","0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // traceable author statement /// 0030246 // carbohydrate binding // inferred from electronic annotation /// 0030246 // carbohydrate binding // traceable author statement","chr19:51645557-51656783 (+) // 84.08 // q13.41"]
["11760793_x_at",27.22956,24.243946,25.522892,26.620365,30.976395,28.391363,0.01632166,-0.15122747,-0.07706022,-0.01632166,0.20231724,0.076600075,0.4888252,0.11838579,-1.1158842,-0.1581873,1.1158842,"down","TBC1D26",353149.0,"0032313 // regulation of Rab GTPase activity // inferred from electronic annotation /// 0032851 // positive regulation of Rab GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005097 // Rab GTPase activator activity // inferred from electronic annotation","chr17:15635596-15647766 (+) // 93.39 // p12"]
["11746697_a_at",1801.2588,1834.2079,1823.5304,1902.8344,1787.2502,1912.3851,-0.021940231,0.004211426,-0.004211426,0.057204247,-0.03320408,0.064427376,0.6850876,0.31882697,-1.0258282,-0.036789197,1.0258282,"down","SLC3A2",6520.0,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006816 // calcium ion transport // non-traceable author statement /// 0006865 // amino acid transport // traceable author statement /// 0006865 // amino acid transport // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0015804 // neutral amino acid transport // inferred from electronic annotation /// 0015827 // tryptophan transport // inferred from sequence or structural similarity /// 0016049 // cell growth // non-traceable author statement /// 0050900 // leukocyte migration // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0060356 // leucine import // inferred from sequence or structural similarity /// 0060356 // leucine import // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0005432 // calcium:sodium antiporter activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0015175 // neutral amino acid transmembrane transporter activity // inferred from sequence or structural similarity /// 0015175 // neutral amino acid transmembrane transporter activity // inferred from electronic annotation /// 0043169 // cation binding // inferred from electronic annotation","chr11:62648371-62656299 (+) // 95.22 // q12.3"]
["11720207_a_at",64.61323,65.293144,59.023296,67.04047,59.307392,65.19035,-0.0064144135,0.008687019,-0.13695955,0.046788216,-0.13003206,0.0064144135,0.93257594,0.79854804,-1.0134577,-0.019285811,1.0134577,"down","IL2RG",3561.0,"0006955 // immune response // traceable author statement /// 0007165 // signal transduction // non-traceable author statement /// 0019221 // cytokine-mediated signaling pathway // inferred from electronic annotation /// 0035771 // interleukin-4-mediated signaling pathway // traceable author statement /// 0038110 // interleukin-2-mediated signaling pathway // traceable author statement /// 0038111 // interleukin-7-mediated signaling pathway // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0009897 // external side of plasma membrane // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004896 // cytokine receptor activity // inferred from electronic annotation /// 0004911 // interleukin-2 receptor activity // traceable author statement /// 0004913 // interleukin-4 receptor activity // traceable author statement /// 0004917 // interleukin-7 receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0019976 // interleukin-2 binding // inferred from sequence or structural similarity","chrX:70327253-70331425 (-) // 90.97 // q13.1"]
["11742554_at",10.070106,11.77499,10.359628,10.833844,10.813925,10.967442,-0.10413885,0.12150836,-0.063245535,0.0013275146,-0.0013275146,0.019009352,0.9231309,0.77183604,-1.0151047,-0.02162847,1.0151047,"down","OR13C4",138804.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr9:107288533-107289490 (-) // 100.0 // q31.1"]
["11728953_a_at",7.720774,8.3063545,7.654361,8.532113,10.891024,9.899145,-0.124813795,-0.019343853,-0.13727736,0.019343615,0.37150836,0.23374486,0.3609485,0.050391756,-1.2328614,-0.30201063,1.2328614,"down","GPR98",84059.0,"0007154 // cell communication // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // non-traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007218 // neuropeptide signaling pathway // inferred from electronic annotation /// 0007399 // nervous system development // non-traceable author statement /// 0007601 // visual perception // inferred from electronic annotation /// 0007605 // sensory perception of sound // inferred from mutant phenotype /// 0007605 // sensory perception of sound // inferred from electronic annotation /// 0016337 // cell-cell adhesion // non-traceable author statement /// 0045494 // photoreceptor cell maintenance // inferred from mutant phenotype /// 0048496 // maintenance of organ identity // inferred from mutant phenotype /// 0048839 // inner ear development // inferred from electronic annotation /// 0050877 // neurological system process // inferred from mutant phenotype /// 0050877 // neurological system process // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050910 // detection of mechanical stimulus involved in sensory perception of sound // inferred from electronic annotation /// 0050953 // sensory perception of light stimulus // inferred from mutant phenotype /// 0060122 // inner ear receptor stereocilium organization // inferred from electronic annotation","0002142 // stereocilia ankle link complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // non-traceable author statement /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0017022 // myosin binding // inferred from electronic annotation","chr5:89854616-90460254 (+) // 99.59 // q14.3"]
["11739631_at",9.640152,10.5025015,10.518695,8.680433,9.835206,9.645453,-0.014846325,0.10875893,0.1109817,-0.16613507,0.014052868,-0.014053106,0.5323829,0.15076369,1.0895078,0.123676546,1.0895078,"up","RPGR",6103.0,"0006886 // intracellular protein transport // traceable author statement /// 0007601 // visual perception // inferred from mutant phenotype /// 0007601 // visual perception // inferred from electronic annotation /// 0030030 // cell projection organization // inferred from electronic annotation /// 0042384 // cilium assembly // inferred from mutant phenotype /// 0042462 // eye photoreceptor cell development // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation","0001750 // photoreceptor outer segment // inferred from direct assay /// 0005622 // intracellular // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from sequence or structural similarity /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0005932 // microtubule basal body // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chrX:38143661-38186787 (-) // 70.77 // p11.4"]
["11754755_a_at",253.19518,242.56256,258.8525,255.6681,246.79303,245.2556,0.018474102,-0.043418884,0.05035448,0.032495975,-0.018474102,-0.027490139,0.89936036,0.7167014,1.0090232,0.012959331,1.0090232,"up","POLR3B",55703.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006383 // transcription from RNA polymerase III promoter // traceable author statement /// 0006385 // transcription elongation from RNA polymerase III promoter // traceable author statement /// 0006386 // termination of RNA polymerase III transcription // traceable author statement /// 0009615 // response to virus // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0032728 // positive regulation of interferon-beta production // inferred from mutant phenotype /// 0045087 // innate immune response // inferred from electronic annotation /// 0045089 // positive regulation of innate immune response // inferred from mutant phenotype","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0003677 // DNA binding // inferred from electronic annotation /// 0003899 // DNA-directed RNA polymerase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016779 // nucleotidyltransferase activity // inferred from electronic annotation /// 0032549 // ribonucleoside binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:106830833-106903974 (+) // 96.97 // q23.3"]
["11729284_x_at",22.645943,23.344011,21.036129,20.440077,21.033981,21.84019,0.0793252,0.12312508,-0.027058125,-0.068526745,-0.027205467,0.027058125,0.5822168,0.19604069,1.0580115,0.08135535,1.0580115,"up","MEF2B /// MEF2BNB /// MEF2BNB-MEF2B","100271849 /// 4207 /// 729991","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007507 // heart development // inferred from expression pattern /// 0007517 // muscle organ development // traceable author statement","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0042826 // histone deacetylase binding // inferred from physical interaction /// 0046983 // protein dimerization activity // inferred from electronic annotation","chr19:19256375-19281098 (-) // 95.2 // p13.11"]
["11754786_s_at",28.137228,38.555496,27.048145,39.043983,41.94549,41.019424,-0.46353817,-0.0090818405,-0.52048874,0.0090818405,0.11249733,0.08028889,0.4119154,0.07285136,-1.3179773,-0.39832553,1.3179773,"down","MXRA8",54587.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr1:1288071-1297183 (-) // 93.67 // p36.33"]
["11733755_at",19.56004,24.687292,23.622478,24.159914,20.532827,23.36076,-0.26421452,0.07164478,0.008036613,0.04049158,-0.19419146,-0.008036613,0.9863795,0.9545869,-1.0052811,-0.0075989556,1.0052811,"down","PKD2L1",9033.0,"0001581 // detection of chemical stimulus involved in sensory perception of sour taste // inferred from sequence or structural similarity /// 0001581 // detection of chemical stimulus involved in sensory perception of sour taste // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // inferred from sequence or structural similarity /// 0006812 // cation transport // inferred from electronic annotation /// 0035725 // sodium ion transmembrane transport // inferred from direct assay /// 0051925 // regulation of calcium ion transport via voltage-gated calcium channel activity // inferred from direct assay /// 0071468 // cellular response to acidity // inferred from sequence or structural similarity /// 0071468 // cellular response to acidity // inferred from electronic annotation /// 0071805 // potassium ion transmembrane transport // inferred from direct assay","0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from mutant phenotype /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from sequence or structural similarity /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0005216 // ion channel activity // inferred from electronic annotation /// 0005227 // calcium activated cation channel activity // inferred from direct assay /// 0005261 // cation channel activity // inferred from direct assay /// 0005261 // cation channel activity // inferred from electronic annotation /// 0005272 // sodium channel activity // inferred from direct assay /// 0005509 // calcium ion binding // inferred from sequence or structural similarity /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008092 // cytoskeletal protein binding // inferred from physical interaction /// 0008324 // cation transmembrane transporter activity // inferred from sequence or structural similarity /// 0008324 // cation transmembrane transporter activity // inferred from electronic annotation /// 0015269 // calcium-activated potassium channel activity // inferred from direct assay /// 0033040 // sour taste receptor activity // inferred from sequence or structural similarity /// 0033040 // sour taste receptor activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from sequence or structural similarity /// 0042802 // identical protein binding // inferred from electronic annotation /// 0051371 // muscle alpha-actinin binding // inferred from physical interaction /// 0051393 // alpha-actinin binding // inferred from physical interaction","chr10:102047905-102090243 (-) // 94.79 // q24.31"]
["11717222_a_at",77.92889,88.87662,86.42851,80.54783,73.89853,81.22635,-0.053738594,0.1359067,0.09561062,-0.0060510635,-0.13035107,0.0060510635,0.6139272,0.22847733,1.0737885,0.10270989,1.0737885,"up","EXTL3",2137.0,"0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0015012 // heparan sulfate proteoglycan biosynthetic process // inferred from electronic annotation /// 0030307 // positive regulation of cell growth // inferred from electronic annotation /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031227 // intrinsic to endoplasmic reticulum membrane // inferred from electronic annotation","0001888 // glucuronyl-galactosyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0016758 // transferase activity, transferring hexosyl groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:28457985-28611204 (+) // 96.83 // p21.1"]
["11757517_x_at",333.03696,344.93884,333.68265,318.1805,316.73904,321.71948,0.024939537,0.07559776,0.027733803,-0.04089737,-0.04744816,-0.024939537,0.20083624,0.010520894,1.0573982,0.080518775,1.0573982,"up","POR",5447.0,"0003420 // regulation of growth plate cartilage chondrocyte proliferation // inferred from electronic annotation /// 0007584 // response to nutrient // inferred from electronic annotation /// 0009437 // carnitine metabolic process // inferred from electronic annotation /// 0009812 // flavonoid metabolic process // inferred from electronic annotation /// 0018393 // internal peptidyl-lysine acetylation // inferred from electronic annotation /// 0019395 // fatty acid oxidation // inferred from electronic annotation /// 0032332 // positive regulation of chondrocyte differentiation // inferred from electronic annotation /// 0032770 // positive regulation of monooxygenase activity // inferred from direct assay /// 0042493 // response to drug // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from electronic annotation /// 0043602 // nitrate catabolic process // inferred from electronic annotation /// 0045542 // positive regulation of cholesterol biosynthetic process // inferred from electronic annotation /// 0045880 // positive regulation of smoothened signaling pathway // inferred from electronic annotation /// 0046210 // nitric oxide catabolic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from direct assay /// 0055114 // oxidation-reduction process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0060192 // negative regulation of lipase activity // inferred from electronic annotation /// 0070988 // demethylation // inferred from electronic annotation /// 0071371 // cellular response to gonadotropin stimulus // inferred from electronic annotation /// 0071372 // cellular response to follicle-stimulating hormone stimulus // inferred from electronic annotation /// 0071375 // cellular response to peptide hormone stimulus // inferred from electronic annotation /// 0090031 // positive regulation of steroid hormone biosynthetic process // inferred from electronic annotation /// 0090181 // regulation of cholesterol metabolic process // inferred from electronic annotation /// 0090346 // cellular organofluorine metabolic process // inferred from direct assay","0005624 // membrane fraction // inferred from electronic annotation /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from direct assay /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0003958 // NADPH-hemoprotein reductase activity // inferred from direct assay /// 0003958 // NADPH-hemoprotein reductase activity // traceable author statement /// 0003958 // NADPH-hemoprotein reductase activity // inferred from electronic annotation /// 0004128 // cytochrome-b5 reductase activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from electronic annotation /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0010181 // FMN binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from electronic annotation /// 0047726 // iron-cytochrome-c reductase activity // inferred from electronic annotation /// 0050660 // flavin adenine dinucleotide binding // inferred from electronic annotation /// 0050661 // NADP binding // inferred from electronic annotation","chr7:75615812-75616172 (+) // 89.33 // q11.23"]
["11747400_a_at",223.01431,227.3391,201.51477,229.92459,213.66289,215.60179,0.024383545,0.05209303,-0.1218667,0.06840801,-0.037416458,-0.024383545,0.9323277,0.7981532,-1.0120866,-0.017332783,1.0120866,"down","COPS7A",50813.0,"0010388 // cullin deneddylation // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0008180 // signalosome // inferred from direct assay /// 0008180 // signalosome // inferred from electronic annotation","","chr12:6833425-6841000 (+) // 100.0 // p13.31"]
["11718961_a_at",122.96,119.24281,123.082954,116.48115,106.812195,105.46693,0.06118965,0.016902924,0.06263161,-0.016902924,-0.14192295,-0.16020918,0.30630735,0.0320167,1.1120743,0.15325312,1.1120743,"up","NUFIP2",57532.0,"","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0042788 // polysomal ribosome // inferred from direct assay","0003723 // RNA binding // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr17:27582857-27621166 (-) // 94.03 // q11.2"]
["11763683_a_at",495.73764,499.87137,510.88535,502.52716,475.7589,522.1168,-0.015802383,-0.0038223267,0.027620316,0.0038223267,-0.07514858,0.05899334,0.95982635,0.87681437,1.0047079,0.006776172,1.0047079,"up","ARL6IP4",51329.0,"0008380 // RNA splicing // traceable author statement","0005634 // nucleus // traceable author statement","0005515 // protein binding // inferred from physical interaction","chr12:123465701-123466268 (+) // 69.12 // q24.31"]
["11729213_a_at",162.72687,180.37402,163.7411,175.04413,169.8409,173.09612,-0.07542658,0.073112965,-0.06646204,0.029839993,-0.013694763,0.013694763,0.8216975,0.5448087,-1.0230466,-0.03287188,1.0230466,"down","PCBP2",5094.0,"0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0009615 // response to virus // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016071 // mRNA metabolic process // non-traceable author statement /// 0032480 // negative regulation of type I interferon production // traceable author statement /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from mutant phenotype /// 0045087 // innate immune response // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation /// 0050687 // negative regulation of defense response to virus // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction","chr12:53845885-53874945 (+) // 91.59 // q13.13"]
["11741847_a_at",6.09729,6.322164,5.42339,5.305373,5.783588,5.608578,0.09836817,0.15061855,-0.07060504,-0.102345705,0.022164822,-0.022164822,0.6598177,0.28596777,1.0670116,0.09357585,1.0670116,"up","C2orf83",56918.0,"0006810 // transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation","0005542 // folic acid binding // inferred from electronic annotation /// 0008518 // reduced folate carrier activity // inferred from electronic annotation","chr2:228474805-228497888 (-) // 78.57 // q36.3"]
["11756596_a_at",35.77912,34.30889,35.999683,31.362015,36.264732,34.429165,0.02774334,-0.03279209,0.03660965,-0.16235638,0.047192574,-0.02774334,0.75389475,0.42195213,1.0411342,0.05815609,1.0411342,"up","PDPR",55066.0,"0006090 // pyruvate metabolic process // traceable author statement /// 0006546 // glycine catabolic process // inferred from electronic annotation /// 0010510 // regulation of acetyl-CoA biosynthetic process from pyruvate // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement /// 0005759 // mitochondrial matrix // inferred from electronic annotation","0004047 // aminomethyltransferase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation","chr16:70154033-70192230 (+) // 94.27 // q22.1"]
["11715930_at",778.3739,770.2856,761.66376,786.96796,783.54877,802.424,-0.0047798157,-0.019849777,-0.036088943,0.011061668,0.0047798157,0.039121628,0.36016524,0.050107412,-1.0270885,-0.03856053,1.0270885,"down","SDHAF2",54949.0,"0006121 // mitochondrial electron transport, succinate to ubiquinone // inferred from mutant phenotype /// 0018293 // protein-FAD linkage // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr11:61197521-61214985 (+) // 89.99 // q12.2"]
["11735126_at",33.0482,32.132214,37.752235,29.273163,31.128271,35.08784,0.020275593,-0.020275593,0.21226597,-0.15471745,-0.06607056,0.10667515,0.7130669,0.35883924,1.0783256,0.1087929,1.0783256,"up","N4BP3",23138.0,"","0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","","chr5:177540443-177553402 (+) // 89.16 // q35.3"]
["11762111_x_at",37.59129,36.9747,37.97572,40.126163,35.81078,38.97767,-0.0073394775,-0.031199455,0.0073394775,0.08680534,-0.07734394,0.044909954,0.84908074,0.60240984,-1.0199678,-0.0285236,1.0199678,"down","EGFL8 /// PPT2 /// PPT2-EGFL8","100532746 /// 80864 /// 9374","0001701 // in utero embryonic development // inferred from sequence or structural similarity /// 0006464 // cellular protein modification process // non-traceable author statement /// 0006464 // cellular protein modification process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005764 // lysosome // non-traceable author statement /// 0005764 // lysosome // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0016021 // integral to membrane // non-traceable author statement","0005509 // calcium ion binding // inferred from electronic annotation /// 0008474 // palmitoyl-(protein) hydrolase activity // non-traceable author statement /// 0008474 // palmitoyl-(protein) hydrolase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016790 // thiolester hydrolase activity // non-traceable author statement","chr6:32121921-32134334 (+) // 99.61 // p21.32"]
["11745398_a_at",28.601377,29.716284,29.901527,30.50333,25.874157,26.83331,-0.027584553,0.027584553,0.036550045,0.0652976,-0.17215729,-0.119644165,0.6751417,0.30588108,1.0626633,0.08768458,1.0626633,"up","NF1",4763.0,"0000165 // MAPK cascade // inferred from sequence or structural similarity /// 0000165 // MAPK cascade // inferred from electronic annotation /// 0001649 // osteoblast differentiation // inferred from sequence or structural similarity /// 0001649 // osteoblast differentiation // inferred from electronic annotation /// 0001656 // metanephros development // inferred from sequence or structural similarity /// 0001656 // metanephros development // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from sequence or structural similarity /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001889 // liver development // inferred from sequence or structural similarity /// 0001889 // liver development // inferred from electronic annotation /// 0001937 // negative regulation of endothelial cell proliferation // inferred from mutant phenotype /// 0001937 // negative regulation of endothelial cell proliferation // inferred from electronic annotation /// 0001938 // positive regulation of endothelial cell proliferation // inferred from electronic annotation /// 0001952 // regulation of cell-matrix adhesion // inferred from sequence or structural similarity /// 0001952 // regulation of cell-matrix adhesion // inferred from electronic annotation /// 0006469 // negative regulation of protein kinase activity // inferred from sequence or structural similarity /// 0006469 // negative regulation of protein kinase activity // inferred from electronic annotation /// 0007154 // cell communication // inferred from sequence or structural similarity /// 0007154 // cell communication // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007265 // Ras protein signal transduction // inferred from sequence or structural similarity /// 0007265 // Ras protein signal transduction // inferred from electronic annotation /// 0007406 // negative regulation of neuroblast proliferation // inferred from sequence or structural similarity /// 0007406 // negative regulation of neuroblast proliferation // inferred from electronic annotation /// 0007420 // brain development // inferred from sequence or structural similarity /// 0007420 // brain development // inferred from electronic annotation /// 0007422 // peripheral nervous system development // inferred from sequence or structural similarity /// 0007422 // peripheral nervous system development // inferred from electronic annotation /// 0007507 // heart development // inferred from sequence or structural similarity /// 0007507 // heart development // inferred from electronic annotation /// 0007519 // skeletal muscle tissue development // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0008542 // visual learning // inferred from sequence or structural similarity /// 0008542 // visual learning // inferred from electronic annotation /// 0014044 // Schwann cell development // inferred from sequence or structural similarity /// 0014044 // Schwann cell development // inferred from electronic annotation /// 0014065 // phosphatidylinositol 3-kinase cascade // inferred from sequence or structural similarity /// 0014065 // phosphatidylinositol 3-kinase cascade // inferred from electronic annotation /// 0016525 // negative regulation of angiogenesis // inferred from electronic annotation /// 0021510 // spinal cord development // inferred from sequence or structural similarity /// 0021510 // spinal cord development // inferred from electronic annotation /// 0021897 // forebrain astrocyte development // inferred from sequence or structural similarity /// 0021897 // forebrain astrocyte development // inferred from electronic annotation /// 0021915 // neural tube development // inferred from electronic annotation /// 0021987 // cerebral cortex development // inferred from sequence or structural similarity /// 0021987 // cerebral cortex development // inferred from electronic annotation /// 0022011 // myelination in peripheral nervous system // inferred from sequence or structural similarity /// 0022011 // myelination in peripheral nervous system // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from sequence or structural similarity /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030198 // extracellular matrix organization // inferred from sequence or structural similarity /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0030199 // collagen fibril organization // inferred from sequence or structural similarity /// 0030199 // collagen fibril organization // inferred from electronic annotation /// 0030325 // adrenal gland development // inferred from sequence or structural similarity /// 0030325 // adrenal gland development // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // inferred from mutant phenotype /// 0030336 // negative regulation of cell migration // inferred from electronic annotation /// 0032228 // regulation of synaptic transmission, GABAergic // inferred from electronic annotation /// 0032318 // regulation of Ras GTPase activity // inferred from mutant phenotype /// 0032320 // positive regulation of Ras GTPase activity // inferred from direct assay /// 0032320 // positive regulation of Ras GTPase activity // inferred from mutant phenotype /// 0032320 // positive regulation of Ras GTPase activity // inferred from sequence or structural similarity /// 0032320 // positive regulation of Ras GTPase activity // inferred from electronic annotation /// 0035021 // negative regulation of Rac protein signal transduction // inferred from electronic annotation /// 0042060 // wound healing // inferred from sequence or structural similarity /// 0042060 // wound healing // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042992 // negative regulation of transcription factor import into nucleus // inferred from sequence or structural similarity /// 0042992 // negative regulation of transcription factor import into nucleus // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from sequence or structural similarity /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043407 // negative regulation of MAP kinase activity // inferred from sequence or structural similarity /// 0043407 // negative regulation of MAP kinase activity // inferred from electronic annotation /// 0043409 // negative regulation of MAPK cascade // inferred from mutant phenotype /// 0043409 // negative regulation of MAPK cascade // inferred from sequence or structural similarity /// 0043409 // negative regulation of MAPK cascade // inferred from electronic annotation /// 0043473 // pigmentation // inferred from sequence or structural similarity /// 0043473 // pigmentation // inferred from electronic annotation /// 0043525 // positive regulation of neuron apoptotic process // inferred from sequence or structural similarity /// 0043525 // positive regulation of neuron apoptotic process // inferred from electronic annotation /// 0043535 // regulation of blood vessel endothelial cell migration // inferred from mutant phenotype /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0045124 // regulation of bone resorption // inferred from sequence or structural similarity /// 0045124 // regulation of bone resorption // inferred from electronic annotation /// 0045685 // regulation of glial cell differentiation // inferred from sequence or structural similarity /// 0045685 // regulation of glial cell differentiation // inferred from electronic annotation /// 0045762 // positive regulation of adenylate cyclase activity // inferred from sequence or structural similarity /// 0045762 // positive regulation of adenylate cyclase activity // inferred from electronic annotation /// 0045765 // regulation of angiogenesis // inferred from mutant phenotype /// 0045765 // regulation of angiogenesis // inferred from electronic annotation /// 0046580 // negative regulation of Ras protein signal transduction // not recorded /// 0046580 // negative regulation of Ras protein signal transduction // inferred from electronic annotation /// 0046929 // negative regulation of neurotransmitter secretion // inferred from electronic annotation /// 0048147 // negative regulation of fibroblast proliferation // inferred from electronic annotation /// 0048169 // regulation of long-term neuronal synaptic plasticity // inferred from electronic annotation /// 0048485 // sympathetic nervous system development // inferred from sequence or structural similarity /// 0048485 // sympathetic nervous system development // inferred from electronic annotation /// 0048593 // camera-type eye morphogenesis // inferred from sequence or structural similarity /// 0048593 // camera-type eye morphogenesis // inferred from electronic annotation /// 0048712 // negative regulation of astrocyte differentiation // inferred from electronic annotation /// 0048715 // negative regulation of oligodendrocyte differentiation // inferred from sequence or structural similarity /// 0048715 // negative regulation of oligodendrocyte differentiation // inferred from electronic annotation /// 0048745 // smooth muscle tissue development // inferred from sequence or structural similarity /// 0048745 // smooth muscle tissue development // inferred from electronic annotation /// 0048844 // artery morphogenesis // inferred from sequence or structural similarity /// 0048844 // artery morphogenesis // inferred from electronic annotation /// 0048853 // forebrain morphogenesis // inferred from sequence or structural similarity /// 0048853 // forebrain morphogenesis // inferred from electronic annotation /// 0050890 // cognition // inferred from mutant phenotype /// 0051056 // regulation of small GTPase mediated signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005737 // cytoplasm // not recorded /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0030424 // axon // inferred from direct assay /// 0030425 // dendrite // inferred from direct assay /// 0031235 // intrinsic to internal side of plasma membrane // not recorded","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005099 // Ras GTPase activator activity // inferred from direct assay /// 0005099 // Ras GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr17:29421944-29546377 (+) // 90.31 // q11.2"]
["11759489_s_at",30.176155,28.5712,30.978638,33.94313,29.248558,31.981739,-0.018932343,-0.09777975,0.018932343,0.1507783,-0.06397581,0.064907074,0.6764044,0.3079595,-1.0593381,-0.083163105,1.0593381,"down","TXNL1",9352.0,"0006662 // glycerol ether metabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0022900 // electron transport chain // inferred from electronic annotation /// 0045454 // cell redox homeostasis // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0009055 // electron carrier activity // inferred from electronic annotation /// 0015035 // protein disulfide oxidoreductase activity // inferred from electronic annotation /// 0015036 // disulfide oxidoreductase activity // inferred from direct assay","chr18:54275509-54305933 (-) // 72.91 // q21.31"]
["11733453_at",96.59709,80.995094,89.65552,93.743034,90.94289,94.83004,0.06514406,-0.18900108,-0.042443752,0.021875858,-0.021875381,0.038508415,0.7517241,0.41881663,-1.0484586,-0.06826986,1.0484586,"down","IRX5",10265.0,"0002027 // regulation of heart rate // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007601 // visual perception // inferred from electronic annotation /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0042551 // neuron maturation // inferred from electronic annotation /// 0048468 // cell development // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0060040 // retinal bipolar neuron differentiation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005499 // vitamin D binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr16:54965110-54968397 (+) // 93.75 // q12.2"]
["11755273_a_at",21.4843,22.347807,25.924303,25.537033,23.945675,24.06728,-0.16013622,-0.10328579,0.1108861,0.08917189,-0.0036540031,0.0036540031,0.7459627,0.4103879,-1.0574352,-0.08056919,1.0574352,"down","C16orf71",146562.0,"","","","chr16:4784502-4799395 (+) // 96.45 // p13.3"]
["11756013_a_at",15.033569,14.336352,13.758478,15.19282,15.890554,14.803819,0.011109114,-0.057400465,-0.11675763,0.02631092,0.09109092,-0.011109114,0.50615597,0.13171782,-1.0642083,-0.08978052,1.0642083,"down","BCL2L10",10017.0,"0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from direct assay /// 0006916 // anti-apoptosis // inferred from electronic annotation /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // traceable author statement /// 0007283 // spermatogenesis // traceable author statement /// 0007292 // female gamete generation // traceable author statement /// 0042981 // regulation of apoptotic process // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr15:52401946-52404965 (-) // 100.0 // q21.2"]
["11733859_s_at",63.41497,53.541092,56.707497,60.023476,61.20736,68.29168,0.06520796,-0.17896938,-0.09607601,-0.0140891075,0.0140891075,0.17209339,0.62270916,0.23936388,-1.0922555,-0.12731034,1.0922555,"down","CLASP2",23122.0,"0000087 // M phase of mitotic cell cycle // traceable author statement /// 0000236 // mitotic prometaphase // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0007020 // microtubule nucleation // inferred from mutant phenotype /// 0007026 // negative regulation of microtubule depolymerization // non-traceable author statement /// 0007026 // negative regulation of microtubule depolymerization // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0007163 // establishment or maintenance of cell polarity // traceable author statement /// 0007163 // establishment or maintenance of cell polarity // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0016477 // cell migration // inferred from electronic annotation /// 0031023 // microtubule organizing center organization // inferred from mutant phenotype /// 0031110 // regulation of microtubule polymerization or depolymerization // inferred from mutant phenotype /// 0032886 // regulation of microtubule-based process // inferred from mutant phenotype /// 0034453 // microtubule anchoring // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005828 // kinetochore microtubule // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0005874 // microtubule // inferred from electronic annotation /// 0005881 // cytoplasmic microtubule // inferred from direct assay /// 0005881 // cytoplasmic microtubule // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005938 // cell cortex // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from direct assay /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // inferred from electronic annotation /// 0008107 // galactoside 2-alpha-L-fucosyltransferase activity // non-traceable author statement /// 0051010 // microtubule plus-end binding // inferred from direct assay","chr3:33537680-33760236 (-) // 97.85 // p22.3"]
["11725412_s_at",379.55893,394.5816,394.14832,405.7072,395.24622,434.1985,-0.057213783,-0.0012140274,-0.0027990341,0.03890133,0.0012140274,0.13681698,0.5298155,0.14834636,-1.0565686,-0.07938647,1.0565686,"down","TRIM14",9830.0,"","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:100846468-100881695 (-) // 79.6 // q22.33"]
["11738413_a_at",49.331665,44.071377,39.83662,47.655777,47.200584,40.437817,0.11319065,-0.049481392,-0.1952281,0.06332779,0.049481392,-0.17361832,0.9505735,0.8509264,-1.0164716,-0.023569942,1.0164716,"down","PUS10",150962.0,"0001522 // pseudouridine synthesis // inferred from electronic annotation /// 0008033 // tRNA processing // inferred from electronic annotation /// 0009451 // RNA modification // inferred from electronic annotation","","0003723 // RNA binding // inferred from electronic annotation /// 0009982 // pseudouridine synthase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation","chr2:61167548-61245365 (-) // 94.35 // p16.1"]
["11746945_a_at",119.015305,121.177185,115.428246,121.14334,115.25665,119.802505,-0.004755497,0.021214962,-0.048906326,0.020812511,-0.05105257,0.004755497,0.9826265,0.9418337,-1.0016099,-0.002320758,1.0016099,"down","UBL4A",8266.0,"0006464 // cellular protein modification process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0071816 // tail-anchored membrane protein insertion into ER membrane // inferred from mutant phenotype","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0071818 // BAT3 complex // inferred from direct assay","0019787 // small conjugating protein ligase activity // traceable author statement","chrX:153713536-153714923 (-) // 99.53 // q28"]
["11734004_x_at",335.42908,333.45377,368.72406,341.95023,347.73465,364.76373,-0.039878845,-0.048399925,0.09665489,-0.01210022,0.01210022,0.08107567,0.88383573,0.68044347,-1.016939,-0.024233205,1.016939,"down","TMEM192 /// ZNF320","162967 /// 201931","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr4:165997230-166034071 (-) // 71.47 // q32.3"]
["11719521_at",10.455665,11.530261,9.90722,10.878333,10.133264,11.904214,-0.028586388,0.112553835,-0.10631919,0.028586388,-0.07377195,0.15860128,0.8705402,0.6515437,-1.0318662,-0.0452559,1.0318662,"down","SEMA5A",9037.0,"0001569 // patterning of blood vessels // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007411 // axon guidance // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0048754 // branching morphogenesis of a tube // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0008046 // axon guidance receptor activity // inferred from electronic annotation","chr5:9035141-9546233 (-) // 95.93 // p15.31"]
["11747003_x_at",7.5478845,6.3059845,6.2834992,7.0070243,6.711267,6.60811,0.18066096,-0.07868981,-0.08384323,0.073390484,0.011173725,-0.011173725,0.9504123,0.8493205,-1.0128503,-0.018420937,1.0128503,"down","LRRC31",79782.0,"","","","chr3:169556966-169587723 (-) // 99.04 // q26.2"]
["11755972_a_at",250.53357,256.27124,260.45648,271.45117,283.84943,275.90823,-0.08586359,-0.053195953,-0.02982521,0.02982521,0.09425831,0.053320885,0.19485913,0.009724218,-1.0832976,-0.11542964,1.0832976,"down","MGEA5",10724.0,"0006044 // N-acetylglucosamine metabolic process // inferred from electronic annotation /// 0006516 // glycoprotein catabolic process // traceable author statement /// 0006612 // protein targeting to membrane // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0010524 // positive regulation of calcium ion transport into cytosol // inferred from electronic annotation /// 0010616 // negative regulation of cardiac muscle adaptation // inferred from electronic annotation /// 0016573 // histone acetylation // inferred from electronic annotation /// 0031343 // positive regulation of cell killing // inferred from electronic annotation /// 0032024 // positive regulation of insulin secretion // inferred from electronic annotation /// 0043243 // positive regulation of protein complex disassembly // inferred from electronic annotation /// 0045862 // positive regulation of proteolysis // inferred from electronic annotation /// 0046060 // dATP metabolic process // inferred from electronic annotation /// 0046326 // positive regulation of glucose import // inferred from electronic annotation /// 0048545 // response to steroid hormone stimulus // inferred from electronic annotation /// 0051054 // positive regulation of DNA metabolic process // inferred from electronic annotation /// 0051901 // positive regulation of mitochondrial depolarization // inferred from electronic annotation /// 0051928 // positive regulation of calcium ion transport // inferred from electronic annotation /// 0060051 // negative regulation of protein glycosylation // inferred from electronic annotation /// 0060124 // positive regulation of growth hormone secretion // inferred from electronic annotation /// 0070265 // necrotic cell death // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004402 // histone acetyltransferase activity // inferred from electronic annotation /// 0004415 // hyalurononglucosaminidase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity, acting on glycosyl bonds // inferred from electronic annotation","chr10:103558999-103578191 (-) // 95.59 // q24.32"]
["11722015_at",208.6792,216.63304,212.5741,156.95131,145.90883,158.30756,0.19927835,0.2532444,0.22595692,-0.21169138,-0.31694126,-0.19927835,0.06690752,3.1654647E-4,1.3839549,0.4687969,1.3839549,"up","OLR1",4973.0,"0006508 // proteolysis // traceable author statement /// 0006954 // inflammatory response // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007159 // leukocyte cell-cell adhesion // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008015 // blood circulation // traceable author statement /// 0008219 // cell death // inferred from electronic annotation /// 0042157 // lipoprotein metabolic process // inferred from electronic annotation /// 0042542 // response to hydrogen peroxide // inferred from electronic annotation /// 0050900 // leukocyte migration // traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005624 // membrane fraction // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005041 // low-density lipoprotein receptor activity // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr12:10310899-10324802 (-) // 78.55 // p13.2"]
["11727071_at",9.401822,10.058972,10.762596,8.536463,8.785809,7.831264,0.048882723,0.14635324,0.24389625,-0.09041929,-0.048882723,-0.21481276,0.277645,0.024529664,1.2011495,0.26441568,1.2011495,"up","ENPP6",133121.0,"0008152 // metabolic process // inferred from electronic annotation /// 0016042 // lipid catabolic process // inferred from electronic annotation /// 0019695 // choline metabolic process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0008889 // glycerophosphodiester phosphodiesterase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr4:185009859-185139114 (-) // 91.17 // q35.1"]
["11728657_at",9.007297,9.119496,8.102418,9.2532015,10.926078,7.83107,-0.008929968,0.008930206,-0.16167164,0.029928446,0.26967955,-0.21081495,0.85018045,0.60491544,-1.0595767,-0.08348809,1.0595767,"down","IGFBP5",3488.0,"0001558 // regulation of cell growth // inferred from electronic annotation /// 0001649 // osteoblast differentiation // inferred from electronic annotation /// 0006006 // glucose metabolic process // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0014912 // negative regulation of smooth muscle cell migration // inferred from direct assay /// 0017148 // negative regulation of translation // inferred from direct assay /// 0030336 // negative regulation of cell migration // inferred from direct assay /// 0031069 // hair follicle morphogenesis // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0042593 // glucose homeostasis // inferred from electronic annotation /// 0043569 // negative regulation of insulin-like growth factor receptor signaling pathway // inferred from direct assay /// 0043569 // negative regulation of insulin-like growth factor receptor signaling pathway // inferred from electronic annotation /// 0048630 // skeletal muscle tissue growth // inferred from electronic annotation /// 0048662 // negative regulation of smooth muscle cell proliferation // inferred from direct assay /// 0051146 // striated muscle cell differentiation // inferred from electronic annotation /// 0051897 // positive regulation of protein kinase B signaling cascade // inferred from electronic annotation /// 0060056 // mammary gland involution // inferred from electronic annotation /// 0071320 // cellular response to cAMP // inferred from direct assay /// 0071407 // cellular response to organic cyclic compound // inferred from direct assay","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0016942 // insulin-like growth factor binding protein complex // inferred by curator","0001968 // fibronectin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005520 // insulin-like growth factor binding // inferred from electronic annotation /// 0019838 // growth factor binding // inferred from electronic annotation /// 0031994 // insulin-like growth factor I binding // inferred from physical interaction","chr2:217536827-217560272 (-) // 94.34 // q35"]
["11735458_a_at",9.579155,9.566257,9.366456,9.70451,9.764866,9.965674,-0.009378433,-0.01132226,-0.041773796,0.009378433,0.018323183,0.04769063,0.33905825,0.04228787,-1.0323668,-0.045955583,1.0323668,"down","FBXO39",162517.0,"","","","chr17:6679541-6690965 (+) // 95.07 // p13.1"]
["11726666_a_at",94.87399,90.95112,94.38068,97.83472,104.53822,95.87401,-0.007563114,-0.06848478,-0.015084267,0.036770344,0.1323824,0.007563591,0.4621195,0.102359235,-1.0638412,-0.08928285,1.0638412,"down","MFSD8",256471.0,"0006810 // transport // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","","chr4:128838960-128887139 (-) // 92.95 // q28.2"]
["11726448_at",42.048626,30.238226,38.086197,32.729557,32.179234,37.83155,0.2569666,-0.21871853,0.11417627,-0.10449791,-0.12896204,0.10449791,0.8412555,0.5874397,1.0671741,0.09379552,1.0671741,"up","ZNF614",80110.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:52516762-52531926 (-) // 69.5 // q13.41"]
["11731855_at",6.8010483,6.638327,7.320591,7.162741,6.9280095,5.981656,-0.013341904,-0.048279285,0.092861176,0.06141281,0.013341904,-0.19855404,0.8466804,0.59826845,1.036471,0.051679764,1.036471,"up","C10orf107",219621.0,"","","","chr10:63422541-63526524 (+) // 94.67 // q21.2"]
["11734547_a_at",12.972626,11.632499,13.737689,11.0888405,13.153104,12.046139,0.05344987,-0.10385966,0.13611865,-0.17291212,0.073382616,-0.05344987,0.783237,0.47101086,1.0566977,0.079562746,1.0566977,"up","TGM4",7047.0,"0018149 // peptide cross-linking // non-traceable author statement /// 0018149 // peptide cross-linking // inferred from electronic annotation /// 0018184 // protein polyamination // non-traceable author statement","","0003810 // protein-glutamine gamma-glutamyltransferase activity // non-traceable author statement /// 0003810 // protein-glutamine gamma-glutamyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:44916097-44956086 (+) // 96.08 // p21.31"]
["11740693_a_at",51.630825,47.75423,44.576763,45.02326,41.887028,47.0153,0.16633224,0.053728104,-0.04560852,-0.031229973,-0.13539696,0.031229973,0.636413,0.25691164,1.0742152,0.103283,1.0742152,"up","FAM83C",128876.0,"","","","chr20:33873286-33880225 (-) // 87.15 // q11.22"]
["11722354_at",1189.2172,1172.6708,1316.5277,1213.6641,1225.3887,1193.3475,-0.01717949,-0.03739357,0.12954617,0.012177467,0.026047707,-0.012177467,0.92498475,0.7768037,1.0113683,0.016308429,1.0113683,"up","SEC23A",10484.0,"0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006888 // ER to Golgi vesicle-mediated transport // traceable author statement /// 0006888 // ER to Golgi vesicle-mediated transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016044 // cellular membrane organization // traceable author statement /// 0016192 // vesicle-mediated transport // traceable author statement /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0048208 // COPII vesicle coating // traceable author statement","0000139 // Golgi membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0012507 // ER to Golgi transport vesicle membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030127 // COPII vesicle coat // inferred from electronic annotation /// 0030868 // smooth endoplasmic reticulum membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation","chr14:39501122-39572732 (-) // 98.24 // q21.1"]
["11717998_a_at",614.45624,614.7187,643.055,639.90814,632.31,646.3903,-0.049938202,-0.04932213,0.015693665,0.008616447,-0.008616447,0.02315712,0.5925453,0.20669597,-1.0249649,-0.035574544,1.0249649,"down","MPLKIP",136647.0,"0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0030496 // midbody // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr7:40172344-40174486 (-) // 86.28 // p14.1"]
["11746623_a_at",5.2647533,5.3820057,4.8867693,6.1294866,5.1843886,5.3336396,-0.009377003,0.022400856,-0.11686206,0.21002293,-0.031569242,0.009377241,0.6858226,0.3200705,-1.0697124,-0.09722297,1.0697124,"down","NR3C2",4306.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006883 // cellular sodium ion homeostasis // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007588 // excretion // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0031959 // mineralocorticoid receptor signaling pathway // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0043401 // steroid hormone mediated signaling pathway // traceable author statement /// 0043401 // steroid hormone mediated signaling pathway // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003707 // steroid hormone receptor activity // inferred from electronic annotation /// 0003707 // steroid hormone receptor activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0005496 // steroid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation /// 0017082 // mineralocorticoid receptor activity // inferred from electronic annotation /// 0042562 // hormone binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr4:149001343-149365850 (-) // 98.55 // q31.23"]
["11716197_a_at",101.276764,100.40401,115.10065,79.74371,79.04066,83.28894,0.1472969,0.13480997,0.3318901,-0.19756365,-0.21033955,-0.13480997,0.15157822,0.004734997,1.3063759,0.38557002,1.3063759,"up","ADIPOR2",79602.0,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0009755 // hormone-mediated signaling pathway // inferred from sequence or structural similarity /// 0019395 // fatty acid oxidation // inferred from sequence or structural similarity","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0042562 // hormone binding // inferred from sequence or structural similarity /// 0042802 // identical protein binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr12:1800188-1897845 (+) // 96.29 // p13.33"]
["11742047_s_at",7.2023993,6.7952747,6.7317767,7.1357408,6.6909456,6.0016427,0.09071803,0.0067722797,-0.0067722797,0.07730365,-0.015549421,-0.17240214,0.7660009,0.44333676,1.0476247,0.06712199,1.0476247,"up","ERMN",57471.0,"0001763 // morphogenesis of a branching structure // inferred from electronic annotation /// 0007015 // actin filament organization // inferred from electronic annotation /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0031344 // regulation of cell projection organization // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0030175 // filopodium // inferred from electronic annotation /// 0033269 // internode region of axon // inferred from electronic annotation /// 0033270 // paranode region of axon // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043209 // myelin sheath // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0051015 // actin filament binding // inferred from electronic annotation","chr2:158175125-158184218 (-) // 92.68 // q24.1"]
["11751503_a_at",23.870628,27.444193,24.620123,29.054123,27.828524,27.121103,-0.19272184,0.008542538,-0.1481204,0.09078455,0.028605938,-0.008542538,0.44793028,0.0940563,-1.1078142,-0.14771593,1.1078142,"down","FGF17",8822.0,"0007165 // signal transduction // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from electronic annotation","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement","0005105 // type 1 fibroblast growth factor receptor binding // inferred from direct assay /// 0005111 // type 2 fibroblast growth factor receptor binding // inferred from direct assay /// 0008083 // growth factor activity // inferred from electronic annotation /// 0008083 // growth factor activity // traceable author statement","chr8:21900425-21906317 (+) // 99.08 // p21.3"]
["11755159_a_at",41.387806,44.819195,47.053047,50.231213,47.543324,49.298954,-0.19255972,-0.07764912,-0.0074772835,0.086818695,0.0074772835,0.059791565,0.40758198,0.07048926,-1.1049067,-0.14392452,1.1049067,"down","COG3",83548.0,"0006486 // protein glycosylation // inferred from mutant phenotype /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006888 // ER to Golgi vesicle-mediated transport // inferred from direct assay /// 0006890 // retrograde vesicle-mediated transport, Golgi to ER // inferred from mutant phenotype /// 0006891 // intra-Golgi vesicle-mediated transport // inferred from direct assay /// 0015031 // protein transport // inferred from direct assay /// 0015031 // protein transport // inferred from electronic annotation /// 0033365 // protein localization to organelle // inferred from mutant phenotype /// 0050821 // protein stabilization // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005801 // cis-Golgi network // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0017119 // Golgi transport complex // inferred from direct assay /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008565 // protein transporter activity // inferred from direct assay","chr13:46039070-46110759 (+) // 96.57 // q14.13"]
["11721924_s_at",12.850653,15.0255995,15.753522,14.532674,14.216169,11.8121395,-0.16157484,0.06400609,0.1322577,0.015883684,-0.015883684,-0.2831459,0.77702296,0.46051922,1.076199,0.10594495,1.076199,"up","PRKCB",5579.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0010829 // negative regulation of glucose transport // inferred from sequence or structural similarity /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0030949 // positive regulation of vascular endothelial growth factor receptor signaling pathway // inferred from sequence or structural similarity /// 0035408 // histone H3-T6 phosphorylation // inferred from direct assay /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0042113 // B cell activation // inferred from sequence or structural similarity /// 0042953 // lipoprotein transport // traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from sequence or structural similarity /// 0045766 // positive regulation of angiogenesis // inferred from sequence or structural similarity /// 0046627 // negative regulation of insulin receptor signaling pathway // inferred from sequence or structural similarity /// 0050853 // B cell receptor signaling pathway // inferred from sequence or structural similarity /// 0050861 // positive regulation of B cell receptor signaling pathway // inferred from sequence or structural similarity /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from sequence or structural similarity","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004697 // protein kinase C activity // inferred from electronic annotation /// 0004697 // protein kinase C activity // traceable author statement /// 0005080 // protein kinase C binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0030374 // ligand-dependent nuclear receptor transcription coactivator activity // inferred from mutant phenotype /// 0035403 // histone kinase activity (H3-T6 specific) // inferred from direct assay /// 0042393 // histone binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050681 // androgen receptor binding // inferred from direct assay","chr16:23846527-24231932 (+) // 90.25 // p12.2"]
["11759355_x_at",18.92535,22.072557,19.249128,19.602243,20.827715,19.804396,-0.058099747,0.1638341,-0.033626556,-0.0074009895,0.0800848,0.0074009895,0.9923359,0.9735148,-1.0018448,-0.0026589797,1.0018448,"down","GPR32",2854.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004982 // N-formyl peptide receptor activity // inferred from electronic annotation","chr19:51273720-51275252 (+) // 84.38 // q13.33"]
["11720638_a_at",536.9783,547.875,537.35004,517.7252,483.2053,520.06036,0.02309227,0.052075386,0.024090767,-0.029584885,-0.12913513,-0.02309227,0.38034177,0.05811194,1.0670962,0.09369028,1.0670962,"up","ACBD6",84320.0,"","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0000062 // fatty-acyl-CoA binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation","chr1:180257364-180472102 (-) // 92.92 // q25.2"]
["11743485_s_at",188.7445,185.99176,188.45346,183.77051,183.71135,187.69905,0.0146045685,-0.00659132,0.012378216,-0.023924828,-0.024389744,0.00659132,0.5496692,0.16651182,1.0144551,0.020704985,1.0144551,"up","NAA25",80018.0,"","0005737 // cytoplasm // inferred from electronic annotation","","chr12:112464492-112546826 (-) // 97.81 // q24.13"]
["11762983_a_at",26.113348,23.540524,25.75132,19.877129,24.465416,22.32301,0.121842384,-0.027798653,0.10170126,-0.2718358,0.027798653,-0.10441351,0.5182294,0.13952455,1.1339827,0.18139857,1.1339827,"up","MED25",81857.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0035563 // positive regulation of chromatin binding // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0048147 // negative regulation of fibroblast proliferation // inferred from mutant phenotype /// 0071158 // positive regulation of cell cycle arrest // inferred from mutant phenotype /// 2001178 // positive regulation of mediator complex assembly // inferred from mutant phenotype","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0042974 // retinoic acid receptor binding // inferred from physical interaction /// 0042974 // retinoic acid receptor binding // inferred from electronic annotation /// 0046965 // retinoid X receptor binding // inferred from physical interaction /// 0046965 // retinoid X receptor binding // inferred from electronic annotation","chr19:50321598-50340219 (+) // 100.0 // q13.33"]
["11731791_a_at",7.9458323,7.0701528,8.177918,8.177918,8.342706,7.892372,-0.02076745,-0.18922448,0.020767689,0.020767689,0.04954934,-0.03050685,0.6907269,0.32650638,-1.0543433,-0.07634475,1.0543433,"down","SLC27A6",28965.0,"0000038 // very long-chain fatty acid metabolic process // traceable author statement /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0015909 // long-chain fatty acid transport // traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0042383 // sarcolemma // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004467 // long-chain fatty acid-CoA ligase activity // traceable author statement /// 0016874 // ligase activity // inferred from electronic annotation /// 0031957 // very long-chain fatty acid-CoA ligase activity // inferred from electronic annotation","chr5:128300819-128369328 (+) // 96.5 // q23.3"]
["11742685_a_at",224.66888,221.10992,236.61713,229.17833,221.35803,235.83862,-0.0143351555,-0.03737116,0.06041956,0.014334679,-0.035754204,0.05566454,0.9476984,0.8404288,-1.0059165,-0.00851052,1.0059165,"down","LAMP2",3920.0,"0002576 // platelet degranulation // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0030168 // platelet activation // traceable author statement","0005764 // lysosome // inferred from direct assay /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from direct assay /// 0005770 // late endosome // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030670 // phagocytic vesicle membrane // inferred from electronic annotation /// 0031088 // platelet dense granule membrane // inferred from direct assay /// 0031088 // platelet dense granule membrane // traceable author statement /// 0031902 // late endosome membrane // inferred from direct assay","","chrX:119560002-119603201 (-) // 92.06 // q24"]
["11715314_at",27.824467,24.788784,30.074146,24.628864,25.95105,28.389786,0.05028057,-0.11638594,0.16245031,-0.12572336,-0.05028057,0.079298496,0.8280664,0.55766267,1.0456139,0.0643502,1.0456139,"up","","","","","","chr7:66136417-66148154 (+) // 96.52 // q11.21"]
["11747404_a_at",37.143513,37.269733,41.387775,38.375587,36.293976,36.956497,-0.0024471283,0.0024471283,0.15364742,0.04463148,-0.03582716,-0.009729385,0.7477295,0.41302285,1.0363592,0.05152411,1.0363592,"up","ZNF586",54807.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:58281019-58291912 (+) // 99.9 // q13.43"]
["11717364_a_at",694.15985,675.91974,728.0725,679.1247,637.2568,685.0357,0.02534008,-0.013075829,0.09415436,-0.006251335,-0.09805298,0.006251335,0.59392786,0.20804723,1.0483767,0.068157166,1.0483767,"up","BCL2L12",83596.0,"0006915 // apoptotic process // inferred from electronic annotation","","","chr19:50168398-50177173 (+) // 97.73 // q13.33"]
["11727026_a_at",743.2209,757.83685,888.2598,804.9018,873.7757,727.2678,-0.07155895,-0.043462753,0.18563175,0.043462753,0.16191292,-0.10286331,0.9779139,0.9287935,-1.0073982,-0.010634126,1.0073982,"down","NDUFB5",4711.0,"0006120 // mitochondrial electron transport, NADH to ubiquinone // non-traceable author statement /// 0006120 // mitochondrial electron transport, NADH to ubiquinone // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0022900 // electron transport chain // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005747 // mitochondrial respiratory chain complex I // inferred from direct assay /// 0005747 // mitochondrial respiratory chain complex I // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0070469 // respiratory chain // inferred from electronic annotation","0008137 // NADH dehydrogenase (ubiquinone) activity // non-traceable author statement /// 0008137 // NADH dehydrogenase (ubiquinone) activity // traceable author statement","chr3:179322581-179342288 (+) // 90.18 // q26.33"]
["11740871_a_at",6.020711,6.1658273,5.2787056,5.548471,5.316751,5.706123,0.09763336,0.13199401,-0.092116356,-0.020210266,-0.08175564,0.020210266,0.7320637,0.38913438,1.0519665,0.073088825,1.0519665,"up","MS4A7",58475.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation","chr11:60145957-60163424 (+) // 76.67 // q12.2"]
["11742007_x_at",83.40486,95.64294,91.7958,109.03873,91.57996,89.17292,-0.13659811,0.06092882,0.001698494,0.25003958,-0.0016980171,-0.040124416,0.7605416,0.43367955,-1.0673717,-0.0940627,1.0673717,"down","KRTAP12-2",353323.0,"","0005882 // intermediate filament // inferred from electronic annotation /// 0045095 // keratin filament // inferred from electronic annotation","","chr21:46086106-46086844 (-) // 96.98 // q22.3"]
["11757452_x_at",206.78203,190.97356,190.55615,188.66354,177.57108,188.62433,0.12509394,0.010356426,0.0071997643,-0.007200241,-0.09461975,-0.0075001717,0.5422913,0.15822576,1.0599455,0.08399004,1.0599455,"up","INO80B",83444.0,"0006281 // DNA repair // inferred from electronic annotation /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0031011 // Ino80 complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:74684458-74685071 (+) // 84.83 // p13.1"]
["11753433_a_at",40.626278,39.588688,55.82252,55.79771,49.65476,55.86152,-0.3736558,-0.4109807,0.08477783,0.08413696,-0.08413696,0.085785866,0.58238375,0.1963167,-1.1990414,-0.26188144,1.1990414,"down","C1orf216",127703.0,"","","","chr1:36181068-36184423 (-) // 100.0 // p34.3"]
["11722526_at",33.791725,38.476593,39.87983,34.99817,37.176968,39.619934,-0.16252518,0.024785995,0.076464176,-0.11191559,-0.024785995,0.06703138,0.99307215,0.97645074,1.0019416,0.0027983657,1.0019416,"up","PTPN21",11099.0,"0006470 // protein dephosphorylation // traceable author statement /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // traceable author statement /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005856 // cytoskeleton // traceable author statement","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation","chr14:88932121-89021123 (-) // 97.22 // q31.3"]
["11740913_a_at",32.54558,35.85479,37.658516,36.106228,35.266823,33.068424,-0.1277771,0.011927128,0.082737446,0.022008896,-0.011927128,-0.10478449,0.92985463,0.7911866,1.014332,0.020530015,1.014332,"up","SKOR1",390598.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // not recorded /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // not recorded /// 0030514 // negative regulation of BMP signaling pathway // inferred from direct assay","0005634 // nucleus // not recorded /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // not recorded /// 0030425 // dendrite // inferred from direct assay /// 0043025 // neuronal cell body // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0046332 // SMAD binding // inferred from physical interaction /// 0046332 // SMAD binding // inferred from electronic annotation","chr15:68118273-68126174 (+) // 86.78 // q23"]
["11750066_x_at",91.70737,93.02312,84.646614,98.874054,88.06183,100.156715,-0.010275841,0.010275364,-0.12586117,0.09827852,-0.068796635,0.11687374,0.6546215,0.2798683,-1.0649155,-0.09073901,1.0649155,"down","FLJ42709",441094.0,"","","","chr5:92746994-92916713 (-) // 89.21 // q15"]
["11752699_a_at",92.671005,95.42604,104.085846,93.03646,90.37327,89.31279,-0.0028390884,0.03942585,0.16474485,0.0028390884,-0.03906107,-0.056090355,0.518664,0.14005579,1.0702007,0.097881354,1.0702007,"up","ARHGEF4",50649.0,"0006915 // apoptotic process // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0030032 // lamellipodium assembly // inferred from mutant phenotype /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0035556 // intracellular signal transduction // non-traceable author statement /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0042060 // wound healing // inferred from direct assay /// 0045787 // positive regulation of cell cycle // inferred from direct assay /// 0046847 // filopodium assembly // inferred from mutant phenotype /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0050673 // epithelial cell proliferation // inferred from direct assay /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // non-traceable author statement /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005085 // guanyl-nucleotide exchange factor activity // inferred from mutant phenotype /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // non-traceable author statement /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0030676 // Rac guanyl-nucleotide exchange factor activity // inferred from mutant phenotype","chr2:131674537-131804281 (+) // 99.94 // q21.1"]
["11734184_a_at",10.531691,9.510128,9.848553,8.020344,9.019623,9.415471,0.15441632,0.0072155,0.057662487,-0.238585,-0.06918192,-0.0072157383,0.44824538,0.094277054,1.1313869,0.17809235,1.1313869,"up","PRDM5",11107.0,"0000278 // mitotic cell cycle // inferred from mutant phenotype /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0016575 // histone deacetylation // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0051567 // histone H3-K9 methylation // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0000976 // transcription regulatory region sequence-specific DNA binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070491 // repressing transcription factor binding // inferred from direct assay","chr4:121614918-121844013 (-) // 97.37 // q27"]
["11717932_at",266.52823,297.73166,303.53217,287.34332,319.7729,289.99573,-0.14073372,0.018990517,0.046827316,-0.03224659,0.12202549,-0.018990517,0.8290838,0.5599842,-1.0342379,-0.048568025,1.0342379,"down","TBK1",29110.0,"0002218 // activation of innate immune response // inferred from electronic annotation /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006468 // protein phosphorylation // non-traceable author statement /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006954 // inflammatory response // traceable author statement /// 0007249 // I-kappaB kinase/NF-kappaB cascade // traceable author statement /// 0008063 // Toll signaling pathway // traceable author statement /// 0009615 // response to virus // traceable author statement /// 0009615 // response to virus // inferred from electronic annotation /// 0010629 // negative regulation of gene expression // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0032480 // negative regulation of type I interferon production // traceable author statement /// 0032481 // positive regulation of type I interferon production // traceable author statement /// 0032606 // type I interferon production // traceable author statement /// 0032727 // positive regulation of interferon-alpha production // inferred from direct assay /// 0032728 // positive regulation of interferon-beta production // inferred from direct assay /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from expression pattern /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation /// 0045359 // positive regulation of interferon-beta biosynthetic process // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0050830 // defense response to Gram-positive bacterium // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0010008 // endosome membrane // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004672 // protein kinase activity // non-traceable author statement /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0051219 // phosphoprotein binding // inferred from physical interaction","chr12:64845659-64895894 (+) // 98.91 // q14.2"]
["11763173_s_at",211.37395,230.37477,215.82103,230.70729,247.92036,235.55435,-0.12522602,-0.0010404587,-0.09518719,0.0010404587,0.10485411,0.031036854,0.4051814,0.06940008,-1.0863295,-0.11946171,1.0863295,"down","PGM3",5238.0,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006041 // glucosamine metabolic process // non-traceable author statement /// 0006048 // UDP-N-acetylglucosamine biosynthetic process // not recorded /// 0006048 // UDP-N-acetylglucosamine biosynthetic process // inferred from electronic annotation /// 0006048 // UDP-N-acetylglucosamine biosynthetic process // traceable author statement /// 0006488 // dolichol-linked oligosaccharide biosynthetic process // traceable author statement /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0019255 // glucose 1-phosphate metabolic process // inferred from electronic annotation /// 0030097 // hemopoiesis // not recorded /// 0030097 // hemopoiesis // inferred from electronic annotation /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005829 // cytosol // not recorded /// 0005829 // cytosol // traceable author statement","0000287 // magnesium ion binding // inferred from electronic annotation /// 0004610 // phosphoacetylglucosamine mutase activity // inferred from direct assay /// 0004610 // phosphoacetylglucosamine mutase activity // inferred from electronic annotation /// 0004614 // phosphoglucomutase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation /// 0016868 // intramolecular transferase activity, phosphotransferases // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:83875908-83903633 (-) // 75.49 // q14.1"]
["11733519_a_at",10.742136,10.719715,11.778431,13.6055,12.756592,13.951306,-0.19041443,-0.19342852,-0.057547808,0.15049481,0.057547808,0.18670511,0.18972367,0.009170389,-1.213112,-0.27871275,1.213112,"down","KCNK10",54207.0,"0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0071805 // potassium ion transmembrane transport // traceable author statement /// 0071805 // potassium ion transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005267 // potassium channel activity // inferred from electronic annotation /// 0005267 // potassium channel activity // traceable author statement","chr14:88646453-88789595 (-) // 92.82 // q31.3"]
["11725803_a_at",42.79645,43.205517,42.660156,39.17775,47.777264,48.596558,-0.0068621635,0.0068621635,-0.011464119,-0.13431883,0.15197086,0.1765008,0.81413555,0.53044945,-1.0486542,-0.068539016,1.0486542,"down","C21orf91",54149.0,"","","","chr21:19161290-19191703 (-) // 97.48 // q21.1"]
["11732987_x_at",6.952887,8.190463,7.5638328,7.487683,8.317152,7.5638328,-0.1215055,0.114827156,0.0,-0.01459837,0.13697195,0.0,0.8629456,0.63391834,-1.0302663,-0.04301727,1.0302663,"down","IFNA6",3443.0,"0006952 // defense response // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0009615 // response to virus // non-traceable author statement /// 0009615 // response to virus // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0060337 // type I interferon-mediated signaling pathway // traceable author statement /// 0060338 // regulation of type I interferon-mediated signaling pathway // traceable author statement","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation","0005125 // cytokine activity // inferred from electronic annotation /// 0005126 // cytokine receptor binding // non-traceable author statement /// 0005126 // cytokine receptor binding // inferred from electronic annotation","chr9:21350316-21350886 (-) // 100.0 // p21.3"]
["11733294_at",60.37372,59.658604,57.638557,57.73049,56.544556,59.75376,0.040888786,0.02369833,-0.025997639,-0.02369833,-0.053643703,0.025998116,0.7286891,0.38391045,1.0209965,0.02997785,1.0209965,"up","PHF20L1",51105.0,"","","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:133787576-133825437 (+) // 96.07 // q24.22"]
["11744612_a_at",512.22375,480.89633,503.5084,502.574,484.31558,478.37384,0.05413246,-0.03691578,0.029374123,0.026694298,-0.026694298,-0.044503212,0.7587941,0.4295662,1.0212703,0.03036472,1.0212703,"up","NUDCD1",84955.0,"","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","","chr8:110254909-110346347 (-) // 97.62 // q23.1"]
["11738934_at",15.244695,19.63765,16.755249,16.294367,15.927788,16.024324,-0.08401132,0.28130388,0.05229473,0.01205492,-0.020772457,-0.01205492,0.7680882,0.4471997,1.0644586,0.09011985,1.0644586,"up","GSX1",219409.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0021527 // spinal cord association neuron differentiation // inferred from electronic annotation /// 0021854 // hypothalamus development // inferred from electronic annotation /// 0021984 // adenohypophysis development // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048663 // neuron fate commitment // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr13:28366779-28368089 (+) // 92.68 // q12.2"]
["11727118_a_at",9.538721,10.852252,9.734099,10.692547,9.887439,10.144019,-0.07028127,0.11584544,-0.04102969,0.094456434,-0.018480062,0.0184803,0.882171,0.67628145,-1.0209938,-0.029974146,1.0209938,"down","CFP",5199.0,"0006955 // immune response // traceable author statement /// 0006956 // complement activation // traceable author statement /// 0006957 // complement activation, alternative pathway // traceable author statement /// 0006957 // complement activation, alternative pathway // inferred from electronic annotation /// 0030449 // regulation of complement activation // traceable author statement /// 0042742 // defense response to bacterium // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0031012 // extracellular matrix // inferred from direct assay","","chrX:47483611-47489704 (-) // 89.24 // p11.23"]
["11723196_at",162.5288,164.22348,162.01193,168.7872,171.71423,163.25778,-0.010710239,0.004254818,-0.015305996,0.043799877,0.06860399,-0.004254341,0.4952542,0.12270558,-1.0304708,-0.04330369,1.0304708,"down","C2orf15 /// MRPL30","150590 /// 51263","0006412 // translation // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005840 // ribosome // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003735 // structural constituent of ribosome // inferred from electronic annotation","chr2:99797541-99814351 (+) // 66.41 // q11.2"]
["11739399_s_at",507.0958,480.21652,538.4164,503.3806,515.24005,491.0814,0.0053043365,-0.07326889,0.091768265,-0.0053043365,0.028290749,-0.040991783,0.93346274,0.8007861,1.0097067,0.01393633,1.0097067,"up","C20orf194 /// UBE2F","140739 /// 25943","0045116 // protein neddylation // inferred from direct assay /// 0045116 // protein neddylation // inferred from electronic annotation","","0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation /// 0019788 // NEDD8 ligase activity // inferred from direct assay","chr2:238875586-238950957 (+) // 98.4 // q37.3"]
["11747089_a_at",41.322357,43.873978,41.554287,42.552555,41.41405,42.942566,-0.025198936,0.06124401,-0.017124176,0.017124176,-0.022001266,0.030286789,0.98502016,0.94891727,-1.0015004,-0.0021629515,1.0015004,"down","PTPRS",5802.0,"0006470 // protein dephosphorylation // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0021510 // spinal cord development // inferred from electronic annotation /// 0021549 // cerebellum development // inferred from electronic annotation /// 0021766 // hippocampus development // inferred from electronic annotation /// 0021987 // cerebral cortex development // inferred from electronic annotation /// 0022038 // corpus callosum development // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation","0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005001 // transmembrane receptor protein tyrosine phosphatase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation","chr19:5273074-5286399 (-) // 82.68 // p13.3"]
["11719967_at",173.78735,167.9594,163.57175,171.88771,166.32278,167.07872,0.053003788,0.003792286,-0.03439617,0.03714657,-0.010334015,-0.003791809,0.9981676,0.9947095,-1.0001434,-2.0688029E-4,1.0001434,"down","HTT",3064.0,"0000050 // urea cycle // inferred from electronic annotation /// 0000052 // citrulline metabolic process // inferred from electronic annotation /// 0000132 // establishment of mitotic spindle orientation // inferred from mutant phenotype /// 0006606 // protein import into nucleus // inferred from electronic annotation /// 0006839 // mitochondrial transport // inferred from electronic annotation /// 0006888 // ER to Golgi vesicle-mediated transport // inferred from electronic annotation /// 0006890 // retrograde vesicle-mediated transport, Golgi to ER // inferred from mutant phenotype /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from electronic annotation /// 0007005 // mitochondrion organization // inferred from electronic annotation /// 0007029 // endoplasmic reticulum organization // inferred from electronic annotation /// 0007030 // Golgi organization // inferred from mutant phenotype /// 0007212 // dopamine receptor signaling pathway // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0007369 // gastrulation // inferred from electronic annotation /// 0007417 // central nervous system development // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0007569 // cell aging // inferred from electronic annotation /// 0007610 // behavior // inferred from electronic annotation /// 0007611 // learning or memory // inferred from electronic annotation /// 0007612 // learning // inferred from electronic annotation /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0008088 // axon cargo transport // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0008306 // associative learning // inferred from electronic annotation /// 0008340 // determination of adult lifespan // inferred from electronic annotation /// 0008542 // visual learning // inferred from electronic annotation /// 0009653 // anatomical structure morphogenesis // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0016197 // endosomal transport // inferred from electronic annotation /// 0019244 // lactate biosynthetic process from pyruvate // inferred from electronic annotation /// 0019805 // quinolinate biosynthetic process // inferred from electronic annotation /// 0021756 // striatum development // inferred from electronic annotation /// 0021988 // olfactory lobe development // inferred from electronic annotation /// 0021990 // neural plate formation // inferred from electronic annotation /// 0022008 // neurogenesis // inferred from electronic annotation /// 0030072 // peptide hormone secretion // inferred from electronic annotation /// 0030073 // insulin secretion // inferred from electronic annotation /// 0034047 // regulation of protein phosphatase type 2A activity // inferred from mutant phenotype /// 0035176 // social behavior // inferred from electronic annotation /// 0042445 // hormone metabolic process // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0046902 // regulation of mitochondrial membrane permeability // inferred from electronic annotation /// 0047496 // vesicle transport along microtubule // inferred from mutant phenotype /// 0047496 // vesicle transport along microtubule // inferred from electronic annotation /// 0048167 // regulation of synaptic plasticity // inferred from electronic annotation /// 0048341 // paraxial mesoderm formation // inferred from electronic annotation /// 0048513 // organ development // not recorded /// 0048666 // neuron development // inferred from electronic annotation /// 0051402 // neuron apoptotic process // inferred from electronic annotation /// 0051592 // response to calcium ion // inferred from electronic annotation /// 0051881 // regulation of mitochondrial membrane potential // inferred from electronic annotation /// 0051938 // L-glutamate import // inferred from electronic annotation /// 0055072 // iron ion homeostasis // inferred from electronic annotation /// 2001237 // negative regulation of extrinsic apoptotic signaling pathway // inferred from mutant phenotype","0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005770 // late endosome // inferred from direct assay /// 0005776 // autophagic vacuole // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0016234 // inclusion body // inferred from electronic annotation /// 0030424 // axon // inferred from direct assay /// 0030424 // axon // inferred from electronic annotation /// 0030425 // dendrite // inferred from direct assay /// 0030659 // cytoplasmic vesicle membrane // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay","0002039 // p53 binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // not recorded /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0034452 // dynactin binding // inferred from physical interaction /// 0045505 // dynein intermediate chain binding // inferred from direct assay /// 0048487 // beta-tubulin binding // inferred from direct assay /// 0050809 // diazepam binding // inferred from electronic annotation","chr4:3076236-3245684 (+) // 97.61 // p16.3"]
["11742227_at",16.594242,16.0453,14.9863825,15.908445,16.11568,14.276278,0.054710865,0.006178856,-0.092319965,-0.006178856,0.012493134,-0.16235232,0.8408518,0.58645374,1.029209,0.041536003,1.029209,"up","CLDN22",53842.0,"0016338 // calcium-independent cell-cell adhesion // inferred from sequence or structural similarity /// 0034329 // cell junction assembly // traceable author statement /// 0045216 // cell-cell junction organization // traceable author statement /// 0070830 // tight junction assembly // traceable author statement","0005886 // plasma membrane // inferred from electronic annotation /// 0005923 // tight junction // inferred from sequence or structural similarity /// 0005923 // tight junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","0005198 // structural molecule activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from sequence or structural similarity","chr4:184239219-184241927 (-) // 98.86 // q35.1"]
["11744134_at",516.039,514.3294,521.84454,516.6684,523.5407,525.82806,-0.00894928,-0.013736725,0.0071907043,-0.0071907043,0.011872292,0.018161774,0.64444923,0.26663852,-1.0088974,-0.0127795,1.0088974,"down","ZSWIM6",57688.0,"","","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr5:60628099-60841999 (+) // 91.81 // q12.1"]
["11716818_a_at",8.438868,8.439376,9.05195,8.495581,10.923348,8.22063,-0.004875183,-0.0047881603,0.09630418,0.0047881603,0.36741877,-0.042675495,0.83629864,0.5778392,-1.0577242,-0.080963545,1.0577242,"down","VSIG4",11326.0,"0006957 // complement activation, alternative pathway // inferred from electronic annotation /// 0032703 // negative regulation of interleukin-2 production // inferred from electronic annotation /// 0042130 // negative regulation of T cell proliferation // inferred from electronic annotation /// 0045087 // innate immune response // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chrX:65241579-65259967 (-) // 98.46 // q12"]
["11741873_a_at",455.70032,464.1211,481.46887,452.80206,471.91815,458.2853,-0.017288208,0.009127617,0.06206894,-0.026493073,0.03316307,-0.009127617,0.82710075,0.5561862,1.0131085,0.018788679,1.0131085,"up","CSNK1E",1454.0,"0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006468 // protein phosphorylation // inferred from sequence or structural similarity /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030178 // negative regulation of Wnt receptor signaling pathway // inferred from electronic annotation /// 0032436 // positive regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from sequence or structural similarity /// 0034613 // cellular protein localization // inferred from electronic annotation /// 0090263 // positive regulation of canonical Wnt receptor signaling pathway // inferred from electronic annotation","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from sequence or structural similarity /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr22:38686697-38714089 (-) // 92.37 // q13.1"]
["11763684_x_at",28.546638,30.866814,29.570662,32.63439,35.342415,36.1807,-0.15290403,-0.040168285,-0.10205841,0.040168285,0.15517569,0.18899536,0.23342197,0.015178689,-1.1699849,-0.22648995,1.1699849,"down","IGK@ /// IGKC","3514 /// 50802","0006955 // immune response // non-traceable author statement /// 0006956 // complement activation // traceable author statement /// 0006958 // complement activation, classical pathway // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0050776 // regulation of immune response // traceable author statement","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005886 // plasma membrane // traceable author statement","0003823 // antigen binding // non-traceable author statement /// 0003823 // antigen binding // inferred from electronic annotation","chr2:89246821-89246950 (-) // 99.22 // p11.2"]
["11719431_a_at",144.89035,146.23335,155.95712,141.99632,142.61737,141.432,0.011405945,0.024716854,0.117593765,-0.017702103,-0.011405468,-0.023447037,0.47530425,0.109992884,1.0488127,0.068757124,1.0488127,"up","TMC6",11322.0,"","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr17:76106543-76124866 (-) // 90.7 // q25.3"]
["11736477_a_at",282.2562,308.87427,295.37418,314.2458,339.71725,310.54077,-0.13389587,-0.0038814545,-0.06835747,0.020992279,0.13343334,0.0038814545,0.44653964,0.09305056,-1.0878507,-0.121480554,1.0878507,"down","ELL2",22936.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006368 // transcription elongation from RNA polymerase II promoter // inferred from electronic annotation /// 0006368 // transcription elongation from RNA polymerase II promoter // traceable author statement /// 0006414 // translational elongation // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0008023 // transcription elongation factor complex // inferred from electronic annotation /// 0008023 // transcription elongation factor complex // traceable author statement","0003746 // translation elongation factor activity // inferred from electronic annotation","chr5:95220804-95297982 (-) // 94.81 // q15"]
["11723114_s_at",111.98949,102.374016,111.8025,114.56682,116.329445,111.8025,0.0012049675,-0.1283083,-0.0012054443,0.034030914,0.056058407,-0.0012054443,0.575681,0.18994734,-1.0514627,-0.072397605,1.0514627,"down","CENPC1",1060.0,"0000087 // M phase of mitotic cell cycle // traceable author statement /// 0000236 // mitotic prometaphase // traceable author statement /// 0000278 // mitotic cell cycle // inferred from mutant phenotype /// 0000278 // mitotic cell cycle // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007059 // chromosome segregation // inferred from mutant phenotype /// 0007067 // mitosis // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 0051382 // kinetochore assembly // inferred from mutant phenotype","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from direct assay /// 0000776 // kinetochore // inferred from electronic annotation /// 0000776 // kinetochore // traceable author statement /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0000780 // condensed nuclear chromosome, centromeric region // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005721 // centromeric heterochromatin // inferred from direct assay /// 0005829 // cytosol // traceable author statement","0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement","chr4:68337520-68411324 (-) // 90.09 // q13.2"]
["11744031_at",131.95332,129.45602,134.39458,140.37401,128.20734,136.16669,-0.013223648,-0.040789127,0.013223648,0.07602453,-0.054772377,0.032122612,0.7934688,0.4913,-1.0219948,-0.031387895,1.0219948,"down","MMP7",4316.0,"0002779 // antibacterial peptide secretion // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0006508 // proteolysis // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0030574 // collagen catabolic process // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042742 // defense response to bacterium // inferred from electronic annotation /// 0050829 // defense response to Gram-negative bacterium // inferred from electronic annotation /// 0050830 // defense response to Gram-positive bacterium // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0031012 // extracellular matrix // inferred from electronic annotation","0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0004222 // metalloendopeptidase activity // traceable author statement /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:102391238-102401483 (-) // 83.18 // q22.2"]
["11738800_a_at",32.30824,39.223446,41.149937,44.99474,36.12141,40.252712,-0.2984991,-0.018684864,0.05048895,0.17935514,-0.13754702,0.018684864,0.78883183,0.48106045,-1.0785273,-0.10906274,1.0785273,"down","BRWD3",254065.0,"0007010 // cytoskeleton organization // inferred from mutant phenotype /// 0008360 // regulation of cell shape // inferred from mutant phenotype","","","chrX:79931682-80065233 (-) // 95.44 // q21.1"]
["11726628_a_at",18.107494,18.706554,16.986656,18.447706,19.218786,19.74244,-0.036905766,0.01005125,-0.12909079,-0.01005125,0.049024582,0.087807655,0.5055325,0.13136263,-1.0675044,-0.09424202,1.0675044,"down","SEMA4A",64218.0,"0001525 // angiogenesis // inferred from electronic annotation /// 0002292 // T cell differentiation involved in immune response // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007409 // axonogenesis // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0010594 // regulation of endothelial cell migration // inferred from electronic annotation /// 0016525 // negative regulation of angiogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045063 // T-helper 1 cell differentiation // inferred from electronic annotation /// 0071526 // semaphorin-plexin signaling pathway // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation","chr1:156119473-156147613 (+) // 97.22 // q22"]
["11736073_a_at",117.33773,107.98459,110.666176,99.19867,90.70732,101.70396,0.16306591,0.04322529,0.07861376,-0.0792079,-0.20830965,-0.04322529,0.29405117,0.028841855,1.1528589,0.20521589,1.1528589,"up","ALDH1B1",219.0,"0005975 // carbohydrate metabolic process // non-traceable author statement /// 0006068 // ethanol catabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0004029 // aldehyde dehydrogenase (NAD) activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016620 // oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor // inferred from electronic annotation","chr9:38392646-38398655 (+) // 69.23 // p13.2"]
["11750741_a_at",102.545235,112.707306,103.99675,99.49294,103.24854,102.46765,-0.004930973,0.1313901,0.015347481,-0.048524857,0.004930496,-0.0060224533,0.6180774,0.23334159,1.0452209,0.06380781,1.0452209,"up","TAB2",23118.0,"0000187 // activation of MAPK activity // traceable author statement /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0007249 // I-kappaB kinase/NF-kappaB cascade // traceable author statement /// 0007254 // JNK cascade // traceable author statement /// 0007507 // heart development // inferred from mutant phenotype /// 0008063 // Toll signaling pathway // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from expression pattern /// 0045087 // innate immune response // traceable author statement /// 0045860 // positive regulation of protein kinase activity // inferred from direct assay /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0051092 // positive regulation of NF-kappaB transcription factor activity // traceable author statement /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0070423 // nucleotide-binding oligomerization domain containing signaling pathway // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0010008 // endosome membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070530 // K63-linked polyubiquitin binding // inferred from direct assay","chr6:149539776-149731075 (+) // 98.5 // q25.1"]
["11761977_at",10.885899,9.362172,10.288264,8.982253,9.737785,8.794266,0.18917012,-0.028375149,0.10770917,-0.0881412,0.028375149,-0.11865544,0.50104105,0.12758122,1.1087816,0.1489752,1.1087816,"up","CCDC171",203238.0,"","","","chr9:15552871-15660144 (+) // 74.54 // p22.3"]
["11734735_a_at",208.37408,210.58437,201.52635,192.98103,210.25854,189.59502,0.024103642,0.03932619,-0.024103642,-0.08661318,0.037092686,-0.112151146,0.63124985,0.25045666,1.0475355,0.06699919,1.0475355,"up","FAR1",84188.0,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0008611 // ether lipid biosynthetic process // traceable author statement /// 0010025 // wax biosynthetic process // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005777 // peroxisome // inferred from electronic annotation /// 0005778 // peroxisomal membrane // inferred from direct assay /// 0005778 // peroxisomal membrane // inferred from electronic annotation /// 0005782 // peroxisomal matrix // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016620 // oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0050062 // long-chain-fatty-acyl-CoA reductase activity // inferred from electronic annotation","chr11:13689891-13753889 (+) // 97.59 // p15.2"]
["11733221_a_at",143.84148,137.28265,149.61253,140.98787,147.35353,135.88727,0.014454365,-0.052875996,0.07120609,-0.014454365,0.049256325,-0.06761503,0.88383573,0.6801359,1.0152717,0.021865811,1.0152717,"up","DLL3",10683.0,"0001501 // skeletal system development // inferred from mutant phenotype /// 0001501 // skeletal system development // inferred from electronic annotation /// 0001756 // somitogenesis // inferred from electronic annotation /// 0007219 // Notch signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007386 // compartment pattern specification // inferred from electronic annotation /// 0007417 // central nervous system development // inferred from electronic annotation /// 0009888 // tissue development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045746 // negative regulation of Notch signaling pathway // inferred from electronic annotation /// 0048339 // paraxial mesoderm development // inferred from electronic annotation /// 0048712 // negative regulation of astrocyte differentiation // inferred from electronic annotation /// 0050768 // negative regulation of neurogenesis // inferred from electronic annotation /// 0050769 // positive regulation of neurogenesis // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0005112 // Notch binding // non-traceable author statement /// 0005112 // Notch binding // inferred from electronic annotation","chr19:39989544-39999109 (+) // 98.51 // q13.2"]
["11751682_a_at",35.394867,36.176296,36.602543,35.048584,32.48226,33.7957,0.007091999,0.03859663,0.05549574,-0.007091999,-0.11679602,-0.05960846,0.3667541,0.052226916,1.0679866,0.09489355,1.0679866,"up","RNASEH2C",84153.0,"0006401 // RNA catabolic process // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0032299 // ribonuclease H2 complex // inferred from direct assay /// 0032299 // ribonuclease H2 complex // inferred from electronic annotation","","chr11:65486718-65488269 (-) // 99.9 // q13.1"]
["11726236_at",14.84216,14.974591,14.974591,17.036259,15.198029,17.46122,-0.02349925,-0.010683775,-0.010683775,0.17540812,0.010683775,0.21095395,0.4177544,0.075820796,-1.107498,-0.14730416,1.107498,"down","ACY3",91703.0,"0008152 // metabolic process // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation","0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation","0004046 // aminoacylase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016788 // hydrolase activity, acting on ester bonds // inferred from electronic annotation /// 0016811 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:67410025-67418419 (-) // 94.84 // q13.2"]
["11762876_x_at",28.967203,32.85475,32.725662,32.706654,41.27809,31.699606,-0.17558289,0.0060987473,4.1913986E-4,-4.1913986E-4,0.33537292,-0.045538425,0.6848022,0.3181831,-1.1117457,-0.15282685,1.1117457,"down","CAPRIN2",65981.0,"0017148 // negative regulation of translation // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0032092 // positive regulation of protein binding // inferred from direct assay /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from direct assay /// 0040008 // regulation of growth // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0050775 // positive regulation of dendrite morphogenesis // inferred from sequence or structural similarity /// 0061003 // positive regulation of dendritic spine morphogenesis // inferred from sequence or structural similarity /// 0090263 // positive regulation of canonical Wnt receptor signaling pathway // inferred from direct assay","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0043235 // receptor complex // inferred from direct assay","0003723 // RNA binding // inferred from electronic annotation /// 0005102 // receptor binding // inferred from physical interaction","chr12:30881312-30884382 (-) // 81.15 // p11.21"]
["11760155_a_at",102.707375,108.59422,95.91943,100.36598,103.89351,103.66743,-0.006711483,0.07369566,-0.10535669,-0.039981365,0.00985384,0.006711006,0.97882813,0.9311698,-1.0034616,-0.0049854084,1.0034616,"down","FUBP1",8880.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0010628 // positive regulation of gene expression // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003697 // single-stranded DNA binding // traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation","chr1:78412168-78444753 (-) // 95.98 // p31.1"]
["11718703_a_at",258.04083,261.249,241.70905,246.6522,232.976,276.70493,0.03256035,0.05038643,-0.061767578,-0.032560825,-0.11485767,0.13330936,0.96438986,0.8913644,1.0081867,0.011762825,1.0081867,"up","INO80E",283899.0,"0006281 // DNA repair // inferred from electronic annotation /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0031011 // Ino80 complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr16:30006913-30017111 (+) // 95.02 // p11.2"]
["11721498_a_at",51.636013,48.624,52.029613,50.523666,46.807873,50.624058,0.029986382,-0.05672264,0.040941715,-0.001431942,-0.11163998,0.001431942,0.7609513,0.43474895,1.0295033,0.041948516,1.0295033,"up","TPST2",8459.0,"0006478 // peptidyl-tyrosine sulfation // traceable author statement","0000139 // Golgi membrane // inferred from electronic annotation /// 0005624 // membrane fraction // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008476 // protein-tyrosine sulfotransferase activity // inferred from electronic annotation /// 0008476 // protein-tyrosine sulfotransferase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation","chr22:26920696-26961370 (-) // 70.34 // q12.1"]
["11732329_a_at",134.53212,136.87408,123.340324,142.19455,128.49799,145.18407,-0.0124492645,0.012448788,-0.1377554,0.06746626,-0.07865429,0.097483635,0.71041954,0.3555304,-1.0531303,-0.074683905,1.0531303,"down","MAP7D1",55700.0,"","0005737 // cytoplasm // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation","","chr1:36621801-36646448 (+) // 93.77 // p34.3"]
["11741461_a_at",38.734493,37.24481,37.202152,44.98345,35.294064,39.5993,0.028289795,-0.028289795,-0.02994299,0.24406528,-0.105903625,0.060145855,0.7982456,0.50058377,-1.0541525,-0.07608358,1.0541525,"down","PCDHGB2",56103.0,"0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr5:140739639-140742196 (+) // 99.96 // q31.3"]
["11744077_at",1673.7341,1641.2401,1641.8695,1625.412,1597.0411,1659.4586,0.028007507,-2.7656555E-4,2.7656555E-4,-0.014257431,-0.039661407,0.015649796,0.6697225,0.29865324,1.0154309,0.022092106,1.0154309,"up","ARPC1B",10095.0,"0006928 // cellular component movement // traceable author statement /// 0030833 // regulation of actin filament polymerization // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005885 // Arp2/3 protein complex // traceable author statement /// 0015629 // actin cytoskeleton // traceable author statement","0003779 // actin binding // inferred from electronic annotation /// 0005200 // structural constituent of cytoskeleton // traceable author statement","chr7:98972349-98992421 (+) // 71.18 // q22.1"]
["11717561_s_at",362.5344,344.86246,361.29205,386.56732,391.86554,392.85684,-0.046300888,-0.11839771,-0.05125332,0.046300888,0.0659399,0.06958485,0.16148068,0.0055231126,-1.0962619,-0.13259245,1.0962619,"down","DTX3L",151636.0,"0006974 // response to DNA damage stimulus // inferred from mutant phenotype /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0010390 // histone monoubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0042393 // histone binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:122283084-122294050 (+) // 70.69 // q21.1"]
["11743116_s_at",4619.864,4654.819,4561.156,4159.713,4325.203,4132.391,0.056767464,0.06764221,0.038315773,-0.094599724,-0.038315773,-0.1041069,0.14226651,0.0039048619,1.0967611,0.13324931,1.0967611,"up","KPNB1",3837.0,"0000060 // protein import into nucleus, translocation // traceable author statement /// 0006309 // apoptotic DNA fragmentation // traceable author statement /// 0006606 // protein import into nucleus // inferred from direct assay /// 0006606 // protein import into nucleus // inferred from electronic annotation /// 0006607 // NLS-bearing substrate import into nucleus // traceable author statement /// 0006610 // ribosomal protein import into nucleus // inferred from direct assay /// 0006610 // ribosomal protein import into nucleus // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006921 // cellular component disassembly involved in apoptotic process // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016032 // viral reproduction // traceable author statement /// 0019058 // viral infectious cycle // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0046796 // viral genome transport in host cell // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005643 // nuclear pore // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0031965 // nuclear membrane // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008139 // nuclear localization sequence binding // traceable author statement /// 0008270 // zinc ion binding // traceable author statement /// 0008565 // protein transporter activity // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from physical interaction","chr17:45726830-45762180 (+) // 88.4 // q21.32"]
["11760895_a_at",9.5212,9.735334,8.079864,9.573923,9.621884,10.368457,-0.011571407,0.02051568,-0.248384,-0.003604889,0.0036046505,0.11141443,0.6503935,0.27517158,-1.0844408,-0.11695133,1.0844408,"down","SLC29A1",2030.0,"0006139 // nucleobase-containing compound metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007595 // lactation // inferred from electronic annotation /// 0015858 // nucleoside transport // inferred from direct assay /// 0015858 // nucleoside transport // inferred from electronic annotation /// 0015858 // nucleoside transport // traceable author statement /// 0015862 // uridine transport // inferred from electronic annotation /// 0030431 // sleep // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0060079 // regulation of excitatory postsynaptic membrane potential // inferred from electronic annotation /// 0071333 // cellular response to glucose stimulus // inferred from electronic annotation /// 0071456 // cellular response to hypoxia // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from direct assay /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from direct assay /// 0016324 // apical plasma membrane // inferred from electronic annotation","0005337 // nucleoside transmembrane transporter activity // inferred from electronic annotation /// 0005337 // nucleoside transmembrane transporter activity // traceable author statement","chr6:44194364-44201181 (+) // 85.54 // p21.1"]
["11728590_a_at",58.377712,60.841682,53.54442,63.09451,59.210403,62.000233,-0.040037155,0.019604683,-0.16471863,0.07205963,-0.019604206,0.046818733,0.58003044,0.19389538,-1.0679235,-0.09480836,1.0679235,"down","TMEM180",79847.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr10:104221169-104236802 (+) // 81.95 // q24.32"]
["11749453_x_at",71.12595,79.974884,70.03552,76.18919,85.08607,90.55791,-0.13419008,0.034980297,-0.15647936,-0.03497982,0.12435627,0.2142744,0.4921127,0.12028882,-1.1379575,-0.18644662,1.1379575,"down","ZFYVE27",118813.0,"0008219 // cell death // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from direct assay /// 0048011 // nerve growth factor receptor signaling pathway // inferred from sequence or structural similarity /// 0072659 // protein localization in plasma membrane // inferred from sequence or structural similarity","0005768 // endosome // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030424 // axon // inferred from sequence or structural similarity /// 0030425 // dendrite // inferred from sequence or structural similarity /// 0032584 // growth cone membrane // inferred from sequence or structural similarity /// 0032584 // growth cone membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0055038 // recycling endosome membrane // inferred from sequence or structural similarity /// 0055038 // recycling endosome membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr10:99496877-99519260 (+) // 98.13 // q24.2"]
["11736124_a_at",48.8878,45.74501,43.450527,51.626305,50.971855,50.288273,-0.020373821,-0.116233826,-0.19047451,0.058258057,0.03985262,0.020373821,0.33905825,0.04218879,-1.1084335,-0.1485222,1.1084335,"down","CPLX2",10814.0,"0006810 // transport // inferred from electronic annotation /// 0006836 // neurotransmitter transport // inferred from electronic annotation /// 0006887 // exocytosis // inferred from electronic annotation /// 0006904 // vesicle docking involved in exocytosis // traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0016079 // synaptic vesicle exocytosis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0031915 // positive regulation of synaptic plasticity // inferred from sequence or structural similarity /// 0031915 // positive regulation of synaptic plasticity // inferred from electronic annotation /// 0043303 // mast cell degranulation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0031201 // SNARE complex // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0000149 // SNARE binding // inferred from electronic annotation /// 0017075 // syntaxin-1 binding // inferred from electronic annotation /// 0019905 // syntaxin binding // inferred from electronic annotation","chr5:175223010-175311024 (+) // 93.99 // q35.2"]
["11726291_a_at",8.617395,8.788194,10.154822,9.166968,9.136797,8.637599,-0.056375742,-0.028060913,0.1804657,0.032817125,0.028060913,-0.05299735,0.90523154,0.73105764,1.0205754,0.029382778,1.0205754,"up","LRRC17",10234.0,"0001503 // ossification // inferred from electronic annotation /// 0001649 // osteoblast differentiation // inferred from sequence or structural similarity /// 0033687 // osteoblast proliferation // inferred from sequence or structural similarity /// 0045671 // negative regulation of osteoclast differentiation // inferred from sequence or structural similarity /// 0045671 // negative regulation of osteoclast differentiation // inferred from electronic annotation /// 0048539 // bone marrow development // inferred from sequence or structural similarity /// 0048539 // bone marrow development // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from sequence or structural similarity /// 0005615 // extracellular space // inferred from electronic annotation","","chr7:102553343-102585540 (+) // 97.74 // q22.1"]
["11758239_s_at",40.812542,42.2719,40.310497,43.522537,41.554302,43.55627,-0.0383358,0.012350559,-0.056192875,0.054414272,-0.012350559,0.05553198,0.4919822,0.120151564,-1.0424113,-0.059924666,1.0424113,"down","C9orf72",203228.0,"0008219 // cell death // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","","chr9:27547784-27548451 (-) // 97.01 // p21.2"]
["11761765_at",21.767527,17.527838,17.590336,18.447515,19.787725,17.217075,0.27307272,-0.039456844,-0.034321785,0.034321785,0.13550091,-0.0652647,0.9344391,0.80299735,1.02213,0.031578716,1.02213,"up","HOXA2",3199.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001709 // cell fate determination // inferred from electronic annotation /// 0002076 // osteoblast development // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007379 // segment specification // inferred from electronic annotation /// 0007389 // pattern specification process // inferred from electronic annotation /// 0008045 // motor axon guidance // inferred from electronic annotation /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0009953 // dorsal/ventral pattern formation // inferred from electronic annotation /// 0021568 // rhombomere 2 development // inferred from electronic annotation /// 0021569 // rhombomere 3 development // inferred from electronic annotation /// 0021658 // rhombomere 3 morphogenesis // inferred from electronic annotation /// 0035284 // brain segmentation // inferred from electronic annotation /// 0042474 // middle ear morphogenesis // inferred from electronic annotation /// 0045165 // cell fate commitment // inferred from electronic annotation /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048703 // embryonic viscerocranium morphogenesis // inferred from electronic annotation /// 0048704 // embryonic skeletal system morphogenesis // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr7:27141236-27142302 (-) // 92.69 // p15.2"]
["11717741_x_at",1196.969,1179.7064,1317.4574,1205.8734,1190.5961,1186.8517,0.003850937,-0.01710701,0.14222145,0.014543533,-0.003850937,-0.008395195,0.7697886,0.44991997,1.029699,0.042222627,1.029699,"up","FUCA2",2519.0,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006004 // fucose metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004560 // alpha-L-fucosidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity, acting on glycosyl bonds // inferred from electronic annotation /// 0043169 // cation binding // inferred from electronic annotation","chr6:143816063-143833027 (-) // 74.62 // q24.2"]
["11730896_a_at",56.778202,65.07348,62.040676,64.129,63.728275,60.976746,-0.1472373,0.04949522,-0.019359589,0.028402805,0.019359112,-0.044315338,0.8253184,0.55232006,-1.028244,-0.04018268,1.028244,"down","MAPKAPK2",9261.0,"0000165 // MAPK cascade // traceable author statement /// 0000187 // activation of MAPK activity // traceable author statement /// 0002224 // toll-like receptor signaling pathway // inferred from sequence or structural similarity /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002224 // toll-like receptor signaling pathway // inferred from electronic annotation /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006692 // prostanoid metabolic process // traceable author statement /// 0006950 // response to stress // inferred from direct assay /// 0006954 // inflammatory response // inferred from sequence or structural similarity /// 0006954 // inflammatory response // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from mutant phenotype /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007265 // Ras protein signal transduction // traceable author statement /// 0008063 // Toll signaling pathway // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from direct assay /// 0019370 // leukotriene biosynthetic process // traceable author statement /// 0031572 // G2/M transition DNA damage checkpoint // inferred from mutant phenotype /// 0032496 // response to lipopolysaccharide // inferred from sequence or structural similarity /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0032675 // regulation of interleukin-6 production // inferred from sequence or structural similarity /// 0032675 // regulation of interleukin-6 production // inferred from electronic annotation /// 0032680 // regulation of tumor necrosis factor production // inferred from direct assay /// 0032680 // regulation of tumor necrosis factor production // inferred from electronic annotation /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0035924 // cellular response to vascular endothelial growth factor stimulus // inferred from mutant phenotype /// 0044281 // small molecule metabolic process // traceable author statement /// 0044351 // macropinocytosis // inferred from sequence or structural similarity /// 0044351 // macropinocytosis // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0048010 // vascular endothelial growth factor receptor signaling pathway // inferred from mutant phenotype /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048255 // mRNA stabilization // inferred from electronic annotation /// 0048839 // inner ear development // inferred from electronic annotation /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0070935 // 3'-UTR-mediated mRNA stabilization // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004871 // signal transducer activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr1:206858288-206907626 (+) // 87.6 // q32.1"]
["11745315_a_at",274.28848,266.5152,270.2473,246.16615,240.99803,260.05408,0.059179306,0.017703056,0.037765503,-0.09688234,-0.12749338,-0.017703056,0.28688797,0.026939008,1.0859133,0.11890892,1.0859133,"up","CTNNAL1",8727.0,"0007155 // cell adhesion // inferred from electronic annotation /// 0007266 // Rho protein signal transduction // inferred from direct assay","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005198 // structural molecule activity // inferred from electronic annotation /// 0045296 // cadherin binding // inferred from electronic annotation","chr9:111704894-111775778 (-) // 99.75 // q31.3"]
["11719825_a_at",115.332794,131.71959,134.82018,131.84795,115.56311,125.08309,-0.15437508,0.037292004,0.070858,0.038697243,-0.15149689,-0.037291527,0.8997866,0.7180217,1.0242884,0.034622002,1.0242884,"up","ZAK",51776.0,"0000075 // cell cycle checkpoint // inferred from direct assay /// 0000077 // DNA damage checkpoint // inferred from mutant phenotype /// 0000165 // MAPK cascade // inferred from electronic annotation /// 0000186 // activation of MAPKK activity // inferred from direct assay /// 0000186 // activation of MAPKK activity // traceable author statement /// 0000186 // activation of MAPKK activity // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006950 // response to stress // non-traceable author statement /// 0007010 // cytoskeleton organization // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from mutant phenotype /// 0007243 // intracellular protein kinase cascade // inferred from direct assay /// 0007243 // intracellular protein kinase cascade // inferred from electronic annotation /// 0007257 // activation of JUN kinase activity // inferred from direct assay /// 0008219 // cell death // non-traceable author statement /// 0008283 // cell proliferation // non-traceable author statement /// 0009314 // response to radiation // inferred from direct assay /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030154 // cell differentiation // non-traceable author statement /// 0043065 // positive regulation of apoptotic process // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from direct assay /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004709 // MAP kinase kinase kinase activity // inferred from direct assay /// 0004709 // MAP kinase kinase kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:173940555-174091874 (+) // 80.78 // q31.1"]
["11741083_x_at",4907.585,5011.508,5050.9717,4853.7354,4956.213,4722.539,-0.007112503,0.023118973,0.034435272,-0.023030281,0.007112503,-0.06256294,0.5235889,0.14375933,1.0302355,0.0429742,1.0302355,"up","EIF4G2",1982.0,"0006412 // translation // inferred from direct assay /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred from direct assay /// 0006413 // translational initiation // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006446 // regulation of translational initiation // inferred from direct assay /// 0007050 // cell cycle arrest // traceable author statement /// 0008219 // cell death // traceable author statement /// 0016070 // RNA metabolic process // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016281 // eukaryotic translation initiation factor 4F complex // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003743 // translation initiation factor activity // inferred from direct assay /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008135 // translation factor activity, nucleic acid binding // inferred from direct assay /// 0008135 // translation factor activity, nucleic acid binding // traceable author statement","chr11:10818592-10830582 (-) // 98.37 // p15.3"]
["11724046_a_at",345.73645,333.99997,378.17023,306.08542,314.5906,326.82013,0.06550026,0.015675545,0.19486332,-0.110238075,-0.07069683,-0.015675545,0.38128227,0.058513537,1.1153913,0.15754986,1.1153913,"up","BID",637.0,"0001836 // release of cytochrome c from mitochondria // inferred from direct assay /// 0001836 // release of cytochrome c from mitochondria // inferred from electronic annotation /// 0006626 // protein targeting to mitochondrion // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0008625 // induction of apoptosis via death domain receptors // traceable author statement /// 0008629 // induction of apoptosis by intracellular signals // traceable author statement /// 0008633 // activation of pro-apoptotic gene products // traceable author statement /// 0008637 // apoptotic mitochondrial changes // traceable author statement /// 0008637 // apoptotic mitochondrial changes // inferred from electronic annotation /// 0032355 // response to estradiol stimulus // inferred from electronic annotation /// 0032461 // positive regulation of protein oligomerization // inferred from direct assay /// 0032464 // positive regulation of protein homooligomerization // inferred from direct assay /// 0032464 // positive regulation of protein homooligomerization // inferred from electronic annotation /// 0034349 // glial cell apoptotic process // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0046902 // regulation of mitochondrial membrane permeability // inferred from electronic annotation /// 0051260 // protein homooligomerization // inferred from electronic annotation /// 0051402 // neuron apoptotic process // traceable author statement /// 0090150 // establishment of protein localization in membrane // inferred from direct assay /// 0090200 // positive regulation of release of cytochrome c from mitochondria // inferred from genetic interaction /// 0090200 // positive regulation of release of cytochrome c from mitochondria // inferred from mutant phenotype /// 0090200 // positive regulation of release of cytochrome c from mitochondria // inferred from electronic annotation /// 2000045 // regulation of G1/S transition of mitotic cell cycle // inferred from electronic annotation /// 2001238 // positive regulation of extrinsic apoptotic signaling pathway // inferred from mutant phenotype","0005624 // membrane fraction // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation /// 0032592 // integral to mitochondrial membrane // inferred from electronic annotation","0005123 // death receptor binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from electronic annotation","chr22:18216907-18256813 (-) // 99.14 // q11.21"]
["11732377_a_at",202.7073,203.67183,195.54073,199.15723,194.10516,192.52525,0.038710117,0.045558453,-0.013219357,0.013219357,-0.023849964,-0.035640717,0.559405,0.17407864,1.0274775,0.039106805,1.0274775,"up","BROX",148362.0,"","0016020 // membrane // inferred from electronic annotation","","chr1:222885894-222906109 (+) // 98.77 // q41"]
["11749480_a_at",564.2535,546.96094,584.1782,525.3462,555.5919,563.69727,0.011870384,-0.03303528,0.061935425,-0.09120464,-0.010447502,0.010447502,0.70617616,0.34773782,1.0309623,0.043991644,1.0309623,"up","LONP1",9361.0,"0000002 // mitochondrial genome maintenance // non-traceable author statement /// 0001666 // response to hypoxia // inferred from expression pattern /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0006515 // misfolded or incompletely synthesized protein catabolic process // not recorded /// 0007005 // mitochondrion organization // inferred from mutant phenotype /// 0032042 // mitochondrial DNA metabolic process // non-traceable author statement /// 0034599 // cellular response to oxidative stress // inferred by curator /// 0034599 // cellular response to oxidative stress // inferred from direct assay /// 0051260 // protein homooligomerization // inferred from direct assay /// 0051603 // proteolysis involved in cellular protein catabolic process // inferred from direct assay /// 0070407 // oxidation-dependent protein catabolic process // inferred from mutant phenotype","0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // non-traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // inferred from mutant phenotype /// 0005759 // mitochondrial matrix // inferred from electronic annotation /// 0042645 // mitochondrial nucleoid // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003697 // single-stranded DNA binding // not recorded /// 0003697 // single-stranded DNA binding // inferred from electronic annotation /// 0003727 // single-stranded RNA binding // inferred from direct assay /// 0004176 // ATP-dependent peptidase activity // inferred from direct assay /// 0004176 // ATP-dependent peptidase activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // not recorded /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0043531 // ADP binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0051880 // G-quadruplex DNA binding // inferred from direct assay /// 0070182 // DNA polymerase binding // inferred from physical interaction /// 0070361 // mitochondrial light strand promoter anti-sense binding // inferred from direct assay /// 0070361 // mitochondrial light strand promoter anti-sense binding // inferred from electronic annotation /// 0070362 // mitochondrial heavy strand promoter anti-sense binding // inferred from direct assay /// 0070363 // mitochondrial light strand promoter sense binding // inferred from direct assay /// 0070364 // mitochondrial heavy strand promoter sense binding // inferred from direct assay","chr19:5691845-5720157 (-) // 96.88 // p13.3"]
["11716550_at",369.97388,359.08417,337.283,365.00082,392.4973,401.75607,0.00976181,-0.0333395,-0.12370205,-0.00976181,0.09502125,0.1286583,0.46429223,0.103527874,-1.0870355,-0.1203991,1.0870355,"down","HES1",3280.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0003151 // outflow tract morphogenesis // inferred from sequence or structural similarity /// 0003151 // outflow tract morphogenesis // inferred from electronic annotation /// 0003266 // regulation of secondary heart field cardioblast proliferation // inferred from electronic annotation /// 0003281 // ventricular septum development // inferred from sequence or structural similarity /// 0003281 // ventricular septum development // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006461 // protein complex assembly // inferred from sequence or structural similarity /// 0006461 // protein complex assembly // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007219 // Notch signaling pathway // inferred from direct assay /// 0007219 // Notch signaling pathway // inferred from mutant phenotype /// 0007219 // Notch signaling pathway // traceable author statement /// 0007224 // smoothened signaling pathway // inferred from electronic annotation /// 0007262 // STAT protein import into nucleus // inferred from sequence or structural similarity /// 0007262 // STAT protein import into nucleus // inferred from electronic annotation /// 0007389 // pattern specification process // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from sequence or structural similarity /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0016477 // cell migration // inferred from electronic annotation /// 0021537 // telencephalon development // inferred from electronic annotation /// 0021555 // midbrain-hindbrain boundary morphogenesis // inferred from electronic annotation /// 0021557 // oculomotor nerve development // inferred from electronic annotation /// 0021558 // trochlear nerve development // inferred from electronic annotation /// 0021575 // hindbrain morphogenesis // inferred from electronic annotation /// 0021861 // forebrain radial glial cell differentiation // inferred from sequence or structural similarity /// 0021915 // neural tube development // inferred from electronic annotation /// 0021983 // pituitary gland development // inferred from electronic annotation /// 0021984 // adenohypophysis development // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0030513 // positive regulation of BMP signaling pathway // inferred from electronic annotation /// 0030901 // midbrain development // inferred from electronic annotation /// 0031016 // pancreas development // inferred from electronic annotation /// 0031018 // endocrine pancreas development // traceable author statement /// 0035019 // somatic stem cell maintenance // inferred from electronic annotation /// 0042102 // positive regulation of T cell proliferation // inferred from electronic annotation /// 0042491 // auditory receptor cell differentiation // inferred from electronic annotation /// 0042517 // positive regulation of tyrosine phosphorylation of Stat3 protein // inferred from sequence or structural similarity /// 0042517 // positive regulation of tyrosine phosphorylation of Stat3 protein // inferred from electronic annotation /// 0042668 // auditory receptor cell fate determination // inferred from electronic annotation /// 0043388 // positive regulation of DNA binding // inferred from sequence or structural similarity /// 0043388 // positive regulation of DNA binding // inferred from electronic annotation /// 0045165 // cell fate commitment // inferred from electronic annotation /// 0045596 // negative regulation of cell differentiation // inferred from electronic annotation /// 0045598 // regulation of fat cell differentiation // inferred from electronic annotation /// 0045608 // negative regulation of auditory receptor cell differentiation // inferred from electronic annotation /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0045747 // positive regulation of Notch signaling pathway // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046331 // lateral inhibition // inferred from electronic annotation /// 0046427 // positive regulation of JAK-STAT cascade // inferred from sequence or structural similarity /// 0046427 // positive regulation of JAK-STAT cascade // inferred from electronic annotation /// 0048469 // cell maturation // inferred from electronic annotation /// 0048505 // regulation of timing of cell differentiation // inferred from electronic annotation /// 0048538 // thymus development // inferred from sequence or structural similarity /// 0048538 // thymus development // inferred from electronic annotation /// 0048667 // cell morphogenesis involved in neuron differentiation // inferred from electronic annotation /// 0048711 // positive regulation of astrocyte differentiation // inferred from sequence or structural similarity /// 0048711 // positive regulation of astrocyte differentiation // inferred from electronic annotation /// 0048715 // negative regulation of oligodendrocyte differentiation // inferred from sequence or structural similarity /// 0048715 // negative regulation of oligodendrocyte differentiation // inferred from electronic annotation /// 0048844 // artery morphogenesis // inferred from sequence or structural similarity /// 0048844 // artery morphogenesis // inferred from electronic annotation /// 0050767 // regulation of neurogenesis // inferred from electronic annotation /// 0060037 // pharyngeal system development // inferred from sequence or structural similarity /// 0060037 // pharyngeal system development // inferred from electronic annotation /// 0060164 // regulation of timing of neuron differentiation // inferred from electronic annotation /// 0060253 // negative regulation of glial cell proliferation // inferred from sequence or structural similarity /// 0060253 // negative regulation of glial cell proliferation // inferred from electronic annotation /// 0060675 // ureteric bud morphogenesis // inferred from electronic annotation /// 0061009 // common bile duct development // inferred from electronic annotation /// 0061106 // negative regulation of stomach neuroendocrine cell differentiation // inferred from electronic annotation /// 0061309 // cardiac neural crest cell development involved in outflow tract morphogenesis // inferred from electronic annotation /// 0072012 // glomerulus vasculature development // inferred from electronic annotation /// 0072049 // comma-shaped body morphogenesis // inferred from electronic annotation /// 0072050 // S-shaped body morphogenesis // inferred from electronic annotation /// 0072141 // renal interstitial cell development // inferred from electronic annotation /// 0072282 // metanephric nephron tubule morphogenesis // inferred from electronic annotation /// 0090102 // cochlea development // inferred from electronic annotation /// 0097084 // vascular smooth muscle cell development // inferred from sequence or structural similarity /// 0097084 // vascular smooth muscle cell development // inferred from electronic annotation /// 0097150 // neuronal stem cell maintenance // inferred from expression pattern /// 0097150 // neuronal stem cell maintenance // inferred from electronic annotation /// 2000227 // negative regulation of pancreatic A cell differentiation // inferred from electronic annotation /// 2000737 // negative regulation of stem cell differentiation // inferred from mutant phenotype /// 2000974 // negative regulation of pro-B cell differentiation // inferred from mutant phenotype /// 2000978 // negative regulation of forebrain neuron differentiation // inferred from sequence or structural similarity /// 2000981 // negative regulation of inner ear receptor cell differentiation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0000981 // sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from electronic annotation /// 0001078 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription // inferred from sequence or structural similarity /// 0001078 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // non-traceable author statement /// 0042803 // protein homodimerization activity // inferred from sequence or structural similarity /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0042826 // histone deacetylase binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from sequence or structural similarity /// 0071820 // N-box binding // inferred from sequence or structural similarity /// 0071820 // N-box binding // inferred from electronic annotation","chr3:193853930-193856396 (+) // 91.83 // q29"]
["11734790_at",58.075512,67.887856,69.7529,75.95139,67.78046,75.479744,-0.24477339,-0.01954937,0.019549847,0.14237261,-0.021834373,0.13338614,0.5488407,0.16544667,-1.1221243,-0.16623251,1.1221243,"down","SRR",63826.0,"0006520 // cellular amino acid metabolic process // inferred from electronic annotation /// 0006563 // L-serine metabolic process // inferred from direct assay /// 0006563 // L-serine metabolic process // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009069 // serine family amino acid metabolic process // inferred from sequence or structural similarity /// 0009069 // serine family amino acid metabolic process // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from expression pattern /// 0042493 // response to drug // inferred from electronic annotation /// 0042866 // pyruvate biosynthetic process // inferred from direct assay /// 0043278 // response to morphine // inferred from electronic annotation /// 0051289 // protein homotetramerization // inferred from electronic annotation /// 0051289 // protein homotetramerization // inferred from sequence or structural similarity /// 0070178 // D-serine metabolic process // inferred from direct assay /// 0070178 // D-serine metabolic process // inferred from electronic annotation /// 0070179 // D-serine biosynthetic process // inferred from direct assay /// 0070179 // D-serine biosynthetic process // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from direct assay /// 0045177 // apical part of cell // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from direct assay /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0003941 // L-serine ammonia-lyase activity // inferred from direct assay /// 0003941 // L-serine ammonia-lyase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from sequence or structural similarity /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from sequence or structural similarity /// 0008721 // D-serine ammonia-lyase activity // inferred from electronic annotation /// 0016594 // glycine binding // inferred from electronic annotation /// 0016594 // glycine binding // inferred from sequence or structural similarity /// 0016829 // lyase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation /// 0018114 // threonine racemase activity // inferred from electronic annotation /// 0018114 // threonine racemase activity // inferred from sequence or structural similarity /// 0030165 // PDZ domain binding // inferred from physical interaction /// 0030170 // pyridoxal phosphate binding // inferred from direct assay /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from sequence or structural similarity /// 0030378 // serine racemase activity // inferred from direct assay /// 0030378 // serine racemase activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:2206959-2228553 (+) // 89.66 // p13.3"]
["11742967_a_at",36.02425,36.825092,38.95817,41.38835,36.75212,43.263348,-0.07233906,-0.04061842,0.04061842,0.12791729,-0.04347992,0.19183779,0.59606683,0.20999649,-1.0838798,-0.11620481,1.0838798,"down","MTERFD2",130916.0,"0006390 // transcription from mitochondrial promoter // inferred from electronic annotation /// 0006626 // protein targeting to mitochondrion // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0042255 // ribosome assembly // inferred from electronic annotation /// 0043010 // camera-type eye development // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005762 // mitochondrial large ribosomal subunit // inferred from direct assay","0019843 // rRNA binding // inferred from direct assay","chr2:242026510-242041714 (-) // 87.6 // q37.3"]
["11751461_a_at",7.6468873,9.068287,7.1900682,8.973107,8.211788,6.8522506,-0.051412106,0.1945455,-0.1402793,0.17932296,0.051411867,-0.20970678,0.99112535,0.97013706,-1.0042078,-0.006057907,1.0042078,"down","C11orf65",160140.0,"","","","chr11:108179245-108338258 (-) // 100.0 // q22.3"]
["11730168_s_at",1194.7825,1216.2228,1233.2728,1227.4462,1266.9218,1235.3738,-0.04232788,-0.01666832,0.0034160614,-0.0034160614,0.042251587,0.0058717728,0.5407823,0.1569741,-1.0234419,-0.03342922,1.0234419,"down",0.0034160614,"LITAF",9516.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007165 // signal transduction // inferred from mutant phenotype /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from mutant phenotype","0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from mutant phenotype /// 0050699 // WW domain binding // inferred from physical interaction"]
["11728135_at",60.487667,49.677757,54.39294,55.17692,49.997154,49.012974,0.21400833,-0.0700326,0.060786724,0.08143234,-0.060786724,-0.089468956,0.7415917,0.4030839,1.0652524,0.09119533,1.0652524,"up","NIPAL4",348938.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0015693 // magnesium ion transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation","chr5:156887026-156901729 (+) // 98.76 // q33.3"]
["11759292_at",53.665127,48.325245,50.4612,47.436054,58.312687,51.49959,0.07411718,-0.07709074,-0.01469326,-0.10388374,0.19394207,0.01469326,0.8894896,0.6957503,-1.0286884,-0.040806085,1.0286884,"down","FAM63A",55793.0,"","","","chr1:150965685-150980225 (-) // 78.72 // q21.3"]
["11762134_at",41.499386,34.777374,34.704117,40.676285,34.170124,50.865593,0.14192152,-0.11301947,-0.11606169,0.11301947,-0.13843298,0.4355216,0.7561766,0.42506856,-1.1217537,-0.16575593,1.1217537,"down","ZNF76",7629.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006359 // regulation of transcription from RNA polymerase III promoter // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:35226685-35256092 (+) // 93.64 // p21.31"]
["11732848_a_at",44.47756,56.20754,48.158443,54.532627,44.260387,50.031403,-0.14223385,0.19545221,-0.027522564,0.15180826,-0.14929533,0.027522564,0.99736744,0.9917896,-1.0010031,-0.0014465086,1.0010031,"down","PRELID2",153768.0,"","0005739 // mitochondrion // inferred from electronic annotation","","chr5:145137894-145214899 (-) // 70.42 // q32"]
["11763606_a_at",27.48062,24.285368,25.601295,35.722557,27.182693,25.023409,0.05896187,-0.119365215,-0.04323578,0.4373827,0.04323578,-0.07617426,0.7130669,0.3588793,-1.1245604,-0.16936108,1.1245604,"down","VAV1",7409.0,"0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006909 // phagocytosis // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006955 // immune response // inferred from electronic annotation /// 0007229 // integrin-mediated signaling pathway // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0031295 // T cell costimulation // traceable author statement /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0042110 // T cell activation // inferred from electronic annotation /// 0043087 // regulation of GTPase activity // inferred from electronic annotation /// 0045785 // positive regulation of cell adhesion // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement","0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005085 // guanyl-nucleotide exchange factor activity // traceable author statement /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0030676 // Rac guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:6826689-6854111 (+) // 98.27 // p13.3"]
["11720257_a_at",197.8858,206.59062,205.30913,201.3072,207.45462,212.26006,-0.05761814,0.004488468,-0.004488468,-0.03288746,0.010509968,0.043547153,0.7541397,0.4224526,-1.0183705,-0.026262546,1.0183705,"down","TRAPPC6B",122553.0,"0006810 // transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation","","chr14:39617014-39640038 (-) // 67.79 // q21.1"]
["11744010_x_at",57.053963,52.26975,50.23885,60.51794,51.1921,52.912853,0.117530346,-0.008821011,-0.065993786,0.20256615,-0.038876057,0.008821011,0.87550586,0.66129994,-1.0304433,-0.043265138,1.0304433,"down","TMEM175",84286.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr4:926174-952444 (+) // 97.13 // p16.3"]
["11729079_s_at",7.516379,6.8032994,6.3201365,7.1913395,7.1048656,7.019431,0.08995724,-0.05384612,-0.16012502,0.02617979,0.008726597,-0.008726597,0.8145376,0.5313664,-1.0353112,-0.050064515,1.0353112,"down","ESRRG",2104.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0043401 // steroid hormone mediated signaling pathway // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0048384 // retinoic acid receptor signaling pathway // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003707 // steroid hormone receptor activity // inferred from electronic annotation /// 0003708 // retinoic acid receptor activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005496 // steroid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050682 // AF-2 domain binding // inferred from sequence or structural similarity","chr1:216676587-217262976 (-) // 94.01 // q41"]
["11720254_a_at",146.1403,147.50595,132.82126,144.83788,137.15208,139.14178,0.041856766,0.05527544,-0.09601116,0.028941631,-0.049720287,-0.028941631,0.9213586,0.76839155,1.0118161,0.016947163,1.0118161,"up","CNNM4",26504.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0007601 // visual perception // inferred from electronic annotation /// 0031214 // biomineral tissue development // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr2:97426638-97477611 (+) // 94.71 // q11.2"]
["11721834_a_at",267.9758,279.91208,265.39407,285.0387,293.50647,290.92618,-0.07596302,-0.013092041,-0.08992958,0.013092041,0.05532646,0.04258728,0.26811832,0.022450397,-1.0692977,-0.09666353,1.0692977,"down","GET4 /// SUN1","23353 /// 51608","0006810 // transport // inferred from electronic annotation /// 0006998 // nuclear envelope organization // inferred from genetic interaction /// 0006998 // nuclear envelope organization // inferred from electronic annotation /// 0071816 // tail-anchored membrane protein insertion into ER membrane // inferred from mutant phenotype /// 0090286 // cytoskeletal anchoring at nuclear membrane // inferred from direct assay /// 0090292 // nuclear matrix anchoring at nuclear membrane // inferred from direct assay","0002080 // acrosomal membrane // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from direct assay /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005637 // nuclear inner membrane // inferred from electronic annotation /// 0005639 // integral to nuclear inner membrane // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from direct assay /// 0034993 // SUN-KASH complex // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0071818 // BAT3 complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0005521 // lamin binding // inferred from electronic annotation","chr7:916185-936071 (+) // 90.3 // p22.3"]
["11742731_at",456.31226,502.63446,490.79486,475.65073,457.93613,453.04068,-0.032503128,0.10698509,0.0725956,0.027378082,-0.027378082,-0.042883873,0.6310279,0.24965273,1.0448679,0.06332052,1.0448679,"up","SURF6",6838.0,"0042254 // ribosome biogenesis // inferred from electronic annotation","0001652 // granular component // inferred from sequence or structural similarity /// 0001652 // granular component // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // traceable author statement /// 0005730 // nucleolus // inferred from electronic annotation /// 0044451 // nucleoplasm part // inferred from electronic annotation","0003677 // DNA binding // inferred from sequence or structural similarity /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from sequence or structural similarity /// 0003723 // RNA binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement","chr9:136196985-136203222 (-) // 93.3 // q34.2"]
["11718393_s_at",727.61835,718.02026,765.4832,664.04114,721.11774,686.7627,0.016052246,-0.0031051636,0.08924103,-0.115857124,0.0031051636,-0.06731796,0.46192747,0.10224939,1.067389,0.094086066,1.067389,"up","PREPL",9581.0,"0006508 // proteolysis // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation","0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr2:44545902-44588010 (-) // 83.12 // p21"]
["11722510_at",1717.0962,1716.1101,1721.6357,1757.2087,1762.1174,1737.144,-0.010277748,-0.011106491,-0.006468773,0.023036957,0.027061462,0.006468773,0.21328753,0.0121076675,-1.0196967,-0.028140116,1.0196967,"down","CRTC3",64784.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0032793 // positive regulation of CREB transcription factor activity // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0051289 // protein homotetramerization // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0008140 // cAMP response element binding protein binding // inferred from electronic annotation","chr15:91073156-91188577 (+) // 95.0 // q26.1"]
["11742801_a_at",129.0998,135.22958,126.68988,119.833916,122.301155,133.45317,0.013593197,0.08051729,-0.01359272,-0.09385729,-0.06445551,0.06143999,0.7035694,0.34464148,1.0418375,0.059130207,1.0418375,"up","MAP2K3",5606.0,"0000165 // MAPK cascade // inferred from electronic annotation /// 0000187 // activation of MAPK activity // traceable author statement /// 0000187 // activation of MAPK activity // inferred from electronic annotation /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0008063 // Toll signaling pathway // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0042035 // regulation of cytokine biosynthetic process // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045860 // positive regulation of protein kinase activity // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0060048 // cardiac muscle contraction // inferred from electronic annotation","0005654 // nucleoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004708 // MAP kinase kinase activity // inferred from electronic annotation /// 0004708 // MAP kinase kinase activity // traceable author statement /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from electronic annotation","chr17:21187957-21218552 (+) // 93.66 // p11.2"]
["11757854_s_at",83.921265,84.654945,81.58746,98.90612,95.21741,95.3171,-0.09737301,-0.0848155,-0.138062,0.13965034,0.08481598,0.08632517,0.088496126,9.573882E-4,-1.1569667,-0.21034732,1.1569667,"down","PLEKHA5",54477.0,"","","0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0005545 // 1-phosphatidylinositol binding // non-traceable author statement","chr12:19528638-19529334 (+) // 92.82 // p12.3"]
["11741257_x_at",26.276836,21.194405,24.284872,24.284872,24.717705,22.856152,0.11373377,-0.19637442,0.0,0.0,0.025486946,-0.0874753,0.98435295,0.9467285,-1.0047832,-0.006884181,1.0047832,"down","APOBEC3F",200316.0,"0002230 // positive regulation of defense response to virus by host // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation /// 0009615 // response to virus // inferred from electronic annotation /// 0009972 // cytidine deamination // inferred from direct assay /// 0010529 // negative regulation of transposition // inferred from direct assay /// 0016553 // base conversion or substitution editing // inferred from direct assay /// 0045071 // negative regulation of viral genome replication // inferred from direct assay /// 0045087 // innate immune response // inferred from direct assay /// 0045869 // negative regulation of retroviral genome replication // inferred from direct assay /// 0048525 // negative regulation of viral reproduction // inferred from direct assay /// 0080111 // DNA demethylation // inferred from direct assay","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0030895 // apolipoprotein B mRNA editing enzyme complex // traceable author statement","0003723 // RNA binding // inferred from direct assay /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004126 // cytidine deaminase activity // inferred from direct assay /// 0008270 // zinc ion binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016814 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr22:39436672-39451973 (+) // 43.37 // q13.1"]
["11746431_a_at",124.85315,136.91891,138.77092,126.92362,132.75433,123.125435,-0.05612755,0.076961994,0.096345425,-0.032399178,0.032399178,-0.076230526,0.68843853,0.32404226,1.0457008,0.064470105,1.0457008,"up","FBXO11",80204.0,"0006464 // cellular protein modification process // inferred from direct assay /// 0006511 // ubiquitin-dependent protein catabolic process // non-traceable author statement /// 0007605 // sensory perception of sound // inferred from electronic annotation /// 0016567 // protein ubiquitination // non-traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0035246 // peptidyl-arginine N-methylation // inferred from direct assay","0000151 // ubiquitin ligase complex // non-traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","0004842 // ubiquitin-protein ligase activity // non-traceable author statement /// 0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016274 // protein-arginine N-methyltransferase activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:48034775-48132932 (-) // 92.73 // p16.3"]
["11750480_a_at",62.425526,67.90762,60.923622,58.727184,59.890484,63.232758,0.01756668,0.1390047,-0.017567158,-0.07054043,-0.042241573,0.03610325,0.65192354,0.27688438,1.051096,0.07189439,1.051096,"up","ATF2",1386.0,"0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0003151 // outflow tract morphogenesis // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred by curator /// 0006366 // transcription from RNA polymerase II promoter // inferred by curator /// 0006970 // response to osmotic stress // inferred from direct assay /// 0008063 // Toll signaling pathway // traceable author statement /// 0032915 // positive regulation of transforming growth factor beta2 production // inferred from electronic annotation /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045444 // fat cell differentiation // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // traceable author statement /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0060612 // adipose tissue development // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay","0000980 // RNA polymerase II distal enhancer sequence-specific DNA binding // inferred from direct assay /// 0001076 // RNA polymerase II transcription factor binding transcription factor activity // inferred by curator /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from electronic annotation /// 0001102 // RNA polymerase II activating transcription factor binding // inferred from physical interaction /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred by curator /// 0003713 // transcription coactivator activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008140 // cAMP response element binding protein binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0035497 // cAMP response element binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation","chr2:175978970-176032897 (-) // 94.46 // q31.1"]
["11720501_a_at",406.62115,402.2884,421.68982,360.56363,340.13208,358.38818,0.09444332,0.078988075,0.14694023,-0.078988075,-0.16314697,-0.08771896,0.12898104,0.0030107326,1.1621062,0.21674186,1.1621062,"up","UBE4B",10277.0,"0000209 // protein polyubiquitination // inferred from electronic annotation /// 0003222 // ventricular trabecula myocardium morphogenesis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from direct assay /// 0009411 // response to UV // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from electronic annotation /// 0034976 // response to endoplasmic reticulum stress // inferred from electronic annotation /// 0042787 // protein ubiquitination involved in ubiquitin-dependent protein catabolic process // traceable author statement /// 0044257 // cellular protein catabolic process // inferred from electronic annotation","0000151 // ubiquitin ligase complex // traceable author statement /// 0000151 // ubiquitin ligase complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation","0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from sequence or structural similarity /// 0019899 // enzyme binding // inferred from electronic annotation /// 0034450 // ubiquitin-ubiquitin ligase activity // inferred from electronic annotation","chr1:10093010-10241297 (+) // 99.01 // p36.22"]
["11739795_a_at",54.693474,59.54181,56.97738,51.80674,56.300167,58.66165,-0.05039549,0.07213831,0.008625507,-0.12862444,-0.0086250305,0.050653934,0.8347612,0.5724421,1.0273929,0.038987957,1.0273929,"up","RHBDF2",79651.0,"0006508 // proteolysis // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0050709 // negative regulation of protein secretion // inferred from sequence or structural similarity /// 0050709 // negative regulation of protein secretion // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from sequence or structural similarity /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0019838 // growth factor binding // inferred from electronic annotation","chr17:74466975-74497872 (-) // 99.55 // q25.1"]
["11742664_x_at",11.244317,10.218628,11.904214,10.885293,11.193339,11.4526615,0.0032775402,-0.13471675,0.08555412,-0.043538094,-0.0032777786,0.029764652,0.96552724,0.8939158,-1.0066843,-0.009611324,1.0066843,"down","","","","","","chr7:28318841-28319318 (-) // 100.0 // p15.1"]
["11731638_a_at",46.849293,38.487404,42.296303,45.97998,41.535297,40.512196,0.16059256,-0.123048306,0.013096809,0.13357115,-0.013096809,-0.049078465,0.9847724,0.94771475,-1.0048069,-0.006918242,1.0048069,"down","GAB1",2549.0,"0000187 // activation of MAPK activity // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // inferred from electronic annotation /// 0007257 // activation of JUN kinase activity // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0008544 // epidermis development // inferred from electronic annotation /// 0030334 // regulation of cell migration // inferred from electronic annotation /// 0043410 // positive regulation of MAPK cascade // inferred from electronic annotation /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from electronic annotation /// 0060711 // labyrinthine layer development // inferred from electronic annotation /// 0070102 // interleukin-6-mediated signaling pathway // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0004871 // signal transducer activity // inferred from electronic annotation /// 0005070 // SH3/SH2 adaptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation","chr4:144257557-144395718 (+) // 96.62 // q31.21"]
["11758163_s_at",528.6351,533.09174,574.07874,522.4555,534.7117,510.8509,-0.006055832,0.006055832,0.11292076,-0.02301979,0.010433197,-0.055425644,0.6128595,0.22719842,1.0426905,0.06031101,1.0426905,"up","ZFP62",643836.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr5:180274614-180276504 (-) // 99.63 // q35.3"]
["11759983_at",46.093113,42.776157,49.668842,45.614655,48.441055,49.83305,-0.035839558,-0.14358377,0.071950436,-0.050893307,0.035839558,0.07671213,0.78900814,0.4814034,-1.0398512,-0.05637708,1.0398512,"down","VTI1A",143187.0,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006888 // ER to Golgi vesicle-mediated transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0042147 // retrograde transport, endosome to Golgi // inferred from direct assay /// 0042147 // retrograde transport, endosome to Golgi // inferred from mutant phenotype /// 0048280 // vesicle fusion with Golgi apparatus // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0030136 // clathrin-coated vesicle // inferred from electronic annotation /// 0031201 // SNARE complex // traceable author statement /// 0031201 // SNARE complex // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation","0005484 // SNAP receptor activity // inferred from direct assay","chr10:114207015-114497532 (+) // 60.61 // q25.2"]
["11753948_a_at",107.78102,104.8684,110.92101,101.47325,114.64648,101.97859,0.019761086,-0.019761562,0.061191082,-0.067242146,0.10885048,-0.060075283,0.88794404,0.6909982,1.0185752,0.026552483,1.0185752,"up","FBXW8",26259.0,"0060712 // spongiotrophoblast layer development // inferred from electronic annotation /// 0060716 // labyrinthine layer blood vessel development // inferred from electronic annotation","0019005 // SCF ubiquitin ligase complex // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr12:117348769-117470625 (+) // 82.45 // q24.22"]
["11763598_a_at",15.674714,13.81122,15.219178,16.410738,18.958406,15.5701685,0.0048270226,-0.17777109,-0.037721395,0.07102823,0.27922583,-0.004827261,0.51999587,0.14112367,-1.1371039,-0.1853641,1.1371039,"down","","","","","","chr8:10983979-10987745 (-) // 61.36 // p23.1"]
["11750772_a_at",6.686081,6.8922763,6.779226,6.062307,7.681442,6.737976,-0.015557051,0.028262615,0.0044026375,-0.15685105,0.184659,-0.0044026375,0.99507654,0.9841927,-1.001456,-0.0020990684,1.001456,"down","PDGFRA",5156.0,"0001553 // luteinization // inferred from sequence or structural similarity /// 0001553 // luteinization // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001775 // cell activation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006935 // chemotaxis // inferred from electronic annotation /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0007204 // elevation of cytosolic calcium ion concentration // inferred from mutant phenotype /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008210 // estrogen metabolic process // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008585 // female gonad development // inferred from electronic annotation /// 0009653 // anatomical structure morphogenesis // inferred from electronic annotation /// 0009725 // response to hormone stimulus // inferred from electronic annotation /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0010035 // response to inorganic substance // inferred from electronic annotation /// 0010544 // negative regulation of platelet activation // inferred from direct assay /// 0010863 // positive regulation of phospholipase C activity // inferred from mutant phenotype /// 0014068 // positive regulation of phosphatidylinositol 3-kinase cascade // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016477 // cell migration // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0023019 // signal transduction involved in regulation of gene expression // inferred from electronic annotation /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0030325 // adrenal gland development // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0030335 // positive regulation of cell migration // inferred from mutant phenotype /// 0030539 // male genitalia development // inferred from electronic annotation /// 0032355 // response to estradiol stimulus // inferred from electronic annotation /// 0033327 // Leydig cell differentiation // inferred from electronic annotation /// 0034097 // response to cytokine stimulus // inferred from electronic annotation /// 0035790 // platelet-derived growth factor receptor-alpha signaling pathway // inferred from direct assay /// 0035790 // platelet-derived growth factor receptor-alpha signaling pathway // inferred from mutant phenotype /// 0035790 // platelet-derived growth factor receptor-alpha signaling pathway // inferred from electronic annotation /// 0038084 // vascular endothelial growth factor signaling pathway // inferred from electronic annotation /// 0038091 // positive regulation of cell proliferation by VEGF-activated platelet derived growth factor receptor signaling pathway // inferred from direct assay /// 0042060 // wound healing // inferred from sequence or structural similarity /// 0042060 // wound healing // inferred from electronic annotation /// 0042063 // gliogenesis // inferred from electronic annotation /// 0042475 // odontogenesis of dentin-containing tooth // inferred from electronic annotation /// 0043552 // positive regulation of phosphatidylinositol 3-kinase activity // inferred from mutant phenotype /// 0043627 // response to estrogen stimulus // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045740 // positive regulation of DNA replication // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from electronic annotation /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from direct assay /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from electronic annotation /// 0048010 // vascular endothelial growth factor receptor signaling pathway // inferred from electronic annotation /// 0048015 // phosphatidylinositol-mediated signaling // inferred from mutant phenotype /// 0048146 // positive regulation of fibroblast proliferation // inferred from direct assay /// 0048557 // embryonic digestive tract morphogenesis // inferred from sequence or structural similarity /// 0048557 // embryonic digestive tract morphogenesis // inferred from electronic annotation /// 0048701 // embryonic cranial skeleton morphogenesis // inferred from sequence or structural similarity /// 0048701 // embryonic cranial skeleton morphogenesis // inferred from electronic annotation /// 0048704 // embryonic skeletal system morphogenesis // inferred from sequence or structural similarity /// 0048705 // skeletal system morphogenesis // inferred from electronic annotation /// 0048839 // inner ear development // inferred from electronic annotation /// 0050920 // regulation of chemotaxis // inferred from mutant phenotype /// 0055003 // cardiac myofibril assembly // inferred from sequence or structural similarity /// 0055003 // cardiac myofibril assembly // inferred from electronic annotation /// 0055093 // response to hyperoxia // inferred from electronic annotation /// 0060021 // palate development // inferred from electronic annotation /// 0060325 // face morphogenesis // inferred from electronic annotation /// 0060326 // cell chemotaxis // inferred from mutant phenotype /// 0060326 // cell chemotaxis // inferred from electronic annotation /// 0061298 // retina vasculature development in camera-type eye // inferred from sequence or structural similarity /// 0061298 // retina vasculature development in camera-type eye // inferred from electronic annotation /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from mutant phenotype /// 0070527 // platelet aggregation // inferred from mutant phenotype /// 0071230 // cellular response to amino acid stimulus // inferred from electronic annotation /// 0072277 // metanephric glomerular capillary formation // inferred from sequence or structural similarity /// 0072277 // metanephric glomerular capillary formation // inferred from electronic annotation /// 2000249 // regulation of actin cytoskeleton reorganization // traceable author statement /// 2000739 // regulation of mesenchymal stem cell differentiation // inferred from mutant phenotype","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031226 // intrinsic to plasma membrane // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from direct assay /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005018 // platelet-derived growth factor alpha-receptor activity // inferred from direct assay /// 0005018 // platelet-derived growth factor alpha-receptor activity // inferred from mutant phenotype /// 0005018 // platelet-derived growth factor alpha-receptor activity // inferred from electronic annotation /// 0005021 // vascular endothelial growth factor-activated receptor activity // inferred from direct assay /// 0005021 // vascular endothelial growth factor-activated receptor activity // inferred from electronic annotation /// 0005161 // platelet-derived growth factor receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0038085 // vascular endothelial growth factor binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0043548 // phosphatidylinositol 3-kinase binding // inferred from electronic annotation /// 0048407 // platelet-derived growth factor binding // inferred from direct assay /// 0048407 // platelet-derived growth factor binding // inferred from physical interaction /// 0048407 // platelet-derived growth factor binding // inferred from electronic annotation","chr4:55095446-55131514 (+) // 90.11 // q12"]
["11715767_s_at",764.91766,741.006,757.54034,781.2415,753.58167,737.5461,0.01776123,-0.028058052,0.0037794113,0.048225403,-0.0037794113,-0.034810066,0.95228326,0.85565436,-1.0037392,-0.005384519,1.0037392,"down","ACAA2",10449.0,"0006084 // acetyl-CoA metabolic process // inferred from electronic annotation /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006635 // fatty acid beta-oxidation // inferred from electronic annotation /// 0006695 // cholesterol biosynthetic process // non-traceable author statement /// 0006916 // anti-apoptosis // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // non-traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0003988 // acetyl-CoA C-acyltransferase activity // non-traceable author statement /// 0003988 // acetyl-CoA C-acyltransferase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0016747 // transferase activity, transferring acyl groups other than amino-acyl groups // inferred from electronic annotation","chr18:47309728-47340330 (-) // 93.3 // q21.1"]
["11742445_at",11.060539,10.796177,10.536797,11.295711,11.71403,10.568677,0.017450571,-0.017450571,-0.05253458,0.04780388,0.10026646,-0.04817629,0.70676965,0.34885302,-1.035846,-0.050809525,1.035846,"down","","","0007155 // cell adhesion // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr16:819427-832926 (-) // 100.0 // p13.3"]
["11736878_a_at",12.995832,12.302175,14.667706,11.672549,11.011608,12.305957,0.078914165,-2.2172928E-4,0.2535081,-0.07601547,-0.16010976,2.2172928E-4,0.45490855,0.09804494,1.1402642,0.18936807,1.1402642,"up","GPLD1",2822.0,"0001503 // ossification // inferred from sequence or structural similarity /// 0002042 // cell migration involved in sprouting angiogenesis // inferred from mutant phenotype /// 0002062 // chondrocyte differentiation // inferred from sequence or structural similarity /// 0002430 // complement receptor mediated signaling pathway // inferred from direct assay /// 0006507 // GPI anchor release // inferred from direct assay /// 0006507 // GPI anchor release // inferred from mutant phenotype /// 0006507 // GPI anchor release // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0008286 // insulin receptor signaling pathway // inferred from direct assay /// 0009749 // response to glucose stimulus // inferred from direct assay /// 0010595 // positive regulation of endothelial cell migration // inferred from mutant phenotype /// 0010694 // positive regulation of alkaline phosphatase activity // inferred from sequence or structural similarity /// 0010867 // positive regulation of triglyceride biosynthetic process // inferred from sequence or structural similarity /// 0010897 // negative regulation of triglyceride catabolic process // inferred from sequence or structural similarity /// 0010907 // positive regulation of glucose metabolic process // inferred from sequence or structural similarity /// 0010983 // positive regulation of high-density lipoprotein particle clearance // inferred from sequence or structural similarity /// 0032869 // cellular response to insulin stimulus // inferred from direct assay /// 0035690 // cellular response to drug // inferred from direct assay /// 0035701 // hematopoietic stem cell migration // traceable author statement /// 0035774 // positive regulation of insulin secretion involved in cellular response to glucose stimulus // inferred from sequence or structural similarity /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0045919 // positive regulation of cytolysis // inferred from direct assay /// 0046470 // phosphatidylcholine metabolic process // inferred from sequence or structural similarity /// 0046470 // phosphatidylcholine metabolic process // traceable author statement /// 0051044 // positive regulation of membrane protein ectodomain proteolysis // inferred from direct assay /// 0051047 // positive regulation of secretion // inferred from sequence or structural similarity /// 0070633 // transepithelial transport // inferred from sequence or structural similarity /// 0071277 // cellular response to calcium ion // inferred from direct assay /// 0071397 // cellular response to cholesterol // inferred from mutant phenotype /// 0071401 // cellular response to triglyceride // inferred from mutant phenotype /// 0071467 // cellular response to pH // inferred from direct assay /// 0097241 // hematopoietic stem cell migration to bone marrow // traceable author statement /// 1900076 // regulation of cellular response to insulin stimulus // inferred from direct assay","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from sequence or structural similarity /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005622 // intracellular // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005792 // microsome // inferred from direct assay /// 0044444 // cytoplasmic part // inferred from direct assay","0004621 // glycosylphosphatidylinositol phospholipase D activity // inferred from direct assay /// 0004621 // glycosylphosphatidylinositol phospholipase D activity // traceable author statement /// 0004621 // glycosylphosphatidylinositol phospholipase D activity // inferred from electronic annotation /// 0004630 // phospholipase D activity // inferred from direct assay /// 0004630 // phospholipase D activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016788 // hydrolase activity, acting on ester bonds // inferred from electronic annotation /// 0017080 // sodium channel regulator activity // inferred from sequence or structural similarity","chr6:24428404-24489850 (-) // 90.09 // p22.3"]
["11742633_at",14.367703,15.186083,14.367703,13.058923,14.354831,14.4468975,0.0,0.07992029,0.0,-0.13779354,-0.0012931824,0.007930279,0.6416897,0.26345718,1.0499779,0.07035896,1.0499779,"up","OR4K13",390433.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr14:20502002-20502917 (-) // 100.0 // q11.2"]
["11749343_a_at",41.314945,44.18031,41.314945,40.06948,43.049347,38.90117,0.0,0.09673977,0.0,-0.04415989,0.059327602,-0.08685017,0.7125305,0.35774383,1.0396808,0.056140717,1.0396808,"up","ABHD4",63874.0,"0016042 // lipid catabolic process // inferred from electronic annotation","","0016787 // hydrolase activity // inferred from electronic annotation","chr14:23067206-23073161 (+) // 93.19 // q11.2"]
["11726411_a_at",51.295113,55.615486,49.406548,49.04224,53.041115,49.13477,0.027059555,0.14372492,-0.027059555,-0.037736893,0.07534933,-0.03501749,0.7948288,0.4945742,1.0331454,0.047043346,1.0331454,"up","ZBTB7C",201501.0,"","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr18:45553257-45691937 (-) // 93.97 // q21.1"]
["11740863_at",9.166564,10.3098545,8.728942,9.348147,10.149959,9.108859,-0.014149666,0.15542126,-0.08472419,0.014149666,0.13287115,-0.023260593,0.9355958,0.806012,-1.0156506,-0.02240422,1.0156506,"down","TPH1",7166.0,"0006950 // response to stress // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009072 // aromatic amino acid family metabolic process // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042427 // serotonin biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046219 // indolalkylamine biosynthetic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0060749 // mammary gland alveolus development // inferred from electronic annotation","0005829 // cytosol // traceable author statement /// 0043005 // neuron projection // inferred from electronic annotation","0004497 // monooxygenase activity // inferred from electronic annotation /// 0004510 // tryptophan 5-monooxygenase activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016597 // amino acid binding // inferred from electronic annotation /// 0016714 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced pteridine as one donor, and incorporation of one atom of oxygen // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:18041956-18063975 (-) // 99.5 // p15.1"]
["11752755_a_at",75.4849,76.80236,82.68297,76.20944,84.04067,68.571785,-0.019371986,0.005589962,0.11203003,-0.005589962,0.13552713,-0.15794516,0.88241947,0.676995,1.029601,0.042085327,1.029601,"up","MTRF1",9617.0,"0006412 // translation // inferred from electronic annotation /// 0006415 // translational termination // inferred from electronic annotation /// 0006449 // regulation of translational termination // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005739 // mitochondrion // traceable author statement","0003747 // translation release factor activity // traceable author statement /// 0003747 // translation release factor activity // inferred from electronic annotation /// 0016149 // translation release factor activity, codon specific // inferred from electronic annotation","chr13:41826418-41837705 (-) // 72.7 // q14.11"]
["11728124_a_at",71.81617,70.46134,77.9538,76.29412,60.5116,73.825,-0.019900322,-0.047377586,0.09841013,0.06736231,-0.26699734,0.019899845,0.8333334,0.5696427,1.0499271,0.07028918,1.0499271,"up","C16orf79",283870.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr16:2259253-2261317 (-) // 87.37 // p13.3"]
["11738984_x_at",762.18506,731.98236,768.2855,779.3784,814.4259,741.0099,-0.005750656,-0.0640831,0.005750656,0.026432037,0.08989143,-0.046399117,0.7237888,0.37629202,-1.0314466,-0.0446691,1.0314466,"down","MAP1LC3B",81631.0,"0006914 // autophagy // inferred from electronic annotation","0000421 // autophagic vacuole membrane // inferred from electronic annotation /// 0005622 // intracellular // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005776 // autophagic vacuole // inferred from sequence or structural similarity /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031090 // organelle membrane // inferred from sequence or structural similarity /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr16:87425405-87438380 (+) // 86.34 // q24.2"]
["11757900_a_at",167.58516,156.29599,167.98883,235.09134,223.87402,233.1282,-0.21063232,-0.31124544,-0.20716095,0.27769518,0.20716143,0.26559734,0.0634374,2.6071045E-4,-1.4075285,-0.49316415,1.4075285,"down","SEBOX /// VTN","645832 /// 7448","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006955 // immune response // inferred from electronic annotation /// 0006955 // immune response // traceable author statement /// 0007155 // cell adhesion // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007160 // cell-matrix adhesion // inferred from direct assay /// 0007160 // cell-matrix adhesion // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0010811 // positive regulation of cell-substrate adhesion // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // inferred from direct assay /// 0014911 // positive regulation of smooth muscle cell migration // inferred from direct assay /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030195 // negative regulation of blood coagulation // inferred by curator /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0030949 // positive regulation of vascular endothelial growth factor receptor signaling pathway // traceable author statement /// 0032092 // positive regulation of protein binding // inferred from direct assay /// 0033627 // cell adhesion mediated by integrin // inferred from direct assay /// 0048260 // positive regulation of receptor-mediated endocytosis // inferred from direct assay /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0061302 // smooth muscle cell-matrix adhesion // inferred from direct assay /// 0090303 // positive regulation of wound healing // inferred by curator","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from sequence or structural similarity /// 0071062 // alphav-beta3 integrin-vitronectin complex // traceable author statement","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005044 // scavenger receptor activity // inferred from electronic annotation /// 0005178 // integrin binding // inferred from physical interaction /// 0008201 // heparin binding // inferred from electronic annotation /// 0030247 // polysaccharide binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050840 // extracellular matrix binding // inferred from electronic annotation","chr17:26694305-26694974 (-) // 96.45 // q11.2"]
["11722691_at",223.38493,235.28271,237.37404,236.42146,222.96648,242.70065,-0.07834625,-0.0034828186,0.009283543,0.0034828186,-0.08105135,0.04129982,0.9343391,0.8028563,-1.0084169,-0.012092189,1.0084169,"down","AVEN",57099.0,"0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from direct assay","0005622 // intracellular // inferred from direct assay /// 0005624 // membrane fraction // inferred from direct assay /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr15:34158194-34331406 (-) // 97.65 // q14"]
["11758372_s_at",740.5853,702.72003,709.55835,691.84186,695.3737,696.60486,0.08202076,0.006304741,0.02027607,-0.016202927,-0.008856773,-0.006304741,0.4875555,0.11751869,1.0328676,0.046655264,1.0328676,"up","EI24",9538.0,"0006914 // autophagy // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0006917 // induction of apoptosis // traceable author statement /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0042493 // response to drug // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation","","chr11:125452238-125454066 (+) // 92.82 // q24.2"]
["11724590_a_at",16.52315,17.02572,18.333426,15.1968775,18.587685,16.567379,-0.023541927,0.019685268,0.12644577,-0.14425564,0.14631653,-0.019685268,0.8697014,0.6493136,1.0329267,0.04673785,1.0329267,"up","TCP10L",140290.0,"","0005634 // nucleus // inferred from electronic annotation","","chr21:33947151-33957837 (-) // 98.24 // q22.11"]
["11751673_a_at",79.7488,79.85518,78.39747,82.18953,85.14737,81.207344,-0.014034748,-0.012112141,-0.038691044,0.029456615,0.080463886,0.012112141,0.35756415,0.04868866,-1.044122,-0.062290266,1.044122,"down","ZMIZ2",83637.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0043596 // nuclear replication fork // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0030374 // ligand-dependent nuclear receptor transcription coactivator activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:44804012-44807583 (+) // 99.7 // p13"]
["11754663_s_at",379.2848,386.94238,370.15564,418.5024,360.37396,406.7494,-0.014418602,0.014418602,-0.049568176,0.12753582,-0.08820534,0.08644009,0.76562035,0.44269425,-1.0413437,-0.0584463,1.0413437,"down","COPS7A",50813.0,"0010388 // cullin deneddylation // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0008180 // signalosome // inferred from direct assay /// 0008180 // signalosome // inferred from electronic annotation","","chr12:6833202-6841030 (+) // 99.3 // p13.31"]
["11719124_at",33.14915,35.109325,42.618244,39.064247,32.507404,45.205547,-0.15987968,-0.07699728,0.20261955,0.07699728,-0.18808317,0.2876482,0.8962971,0.71005166,-1.0499156,-0.070273295,1.0499156,"down","TIMELESS",8914.0,"0002009 // morphogenesis of an epithelium // inferred from sequence or structural similarity /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007623 // circadian rhythm // inferred from sequence or structural similarity /// 0007623 // circadian rhythm // traceable author statement /// 0009582 // detection of abiotic stimulus // traceable author statement /// 0009628 // response to abiotic stimulus // traceable author statement /// 0033261 // regulation of S phase // inferred from mutant phenotype /// 0042127 // regulation of cell proliferation // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0048511 // rhythmic process // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0000790 // nuclear chromatin // inferred from direct assay /// 0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr12:56810157-56843191 (-) // 91.81 // q13.3"]
["11744454_a_at",205.70744,201.30447,210.82756,195.04526,204.37401,210.89775,0.004691124,-0.02652359,0.04016018,-0.07209396,-0.004691124,0.040640354,0.87381464,0.6576779,1.0126654,0.018157551,1.0126654,"up","PARD3",56288.0,"0006461 // protein complex assembly // traceable author statement /// 0006612 // protein targeting to membrane // inferred from sequence or structural similarity /// 0007049 // cell cycle // inferred from electronic annotation /// 0007163 // establishment or maintenance of cell polarity // traceable author statement /// 0007205 // protein kinase C-activating G-protein coupled receptor signaling pathway // traceable author statement /// 0007409 // axonogenesis // traceable author statement /// 0008356 // asymmetric cell division // traceable author statement /// 0034329 // cell junction assembly // traceable author statement /// 0045216 // cell-cell junction organization // traceable author statement /// 0051301 // cell division // inferred from electronic annotation /// 0070830 // tight junction assembly // inferred from sequence or structural similarity /// 0070830 // tight junction assembly // traceable author statement /// 0090162 // establishment of epithelial cell polarity // inferred from sequence or structural similarity","0005737 // cytoplasm // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from direct assay /// 0005911 // cell-cell junction // inferred from sequence or structural similarity /// 0005911 // cell-cell junction // inferred from electronic annotation /// 0005912 // adherens junction // inferred from electronic annotation /// 0005913 // cell-cell adherens junction // inferred from electronic annotation /// 0005923 // tight junction // inferred from direct assay /// 0005923 // tight junction // inferred from sequence or structural similarity /// 0005923 // tight junction // inferred from electronic annotation /// 0005923 // tight junction // traceable author statement /// 0005938 // cell cortex // inferred from electronic annotation /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from electronic annotation","0005080 // protein kinase C binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005546 // phosphatidylinositol-4,5-bisphosphate binding // inferred from sequence or structural similarity /// 0005547 // phosphatidylinositol-3,4,5-trisphosphate binding // inferred from sequence or structural similarity /// 0008289 // lipid binding // inferred from electronic annotation /// 0032266 // phosphatidylinositol-3-phosphate binding // inferred from sequence or structural similarity","chr10:34601189-35104211 (-) // 92.45 // p11.21"]
["11746108_a_at",21.776861,20.88252,20.441164,19.08835,20.17607,19.749651,0.10073471,0.040234566,0.009416103,-0.08936882,-0.009416103,-0.04023409,0.36845154,0.05319784,1.0691528,0.0964681,1.0691528,"up","MPP2",4355.0,"0007165 // signal transduction // traceable author statement","0005624 // membrane fraction // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from direct assay","0004385 // guanylate kinase activity // traceable author statement","chr17:41953532-41977992 (-) // 97.74 // q21.31"]
["11754897_a_at",35.681515,34.48561,34.775284,34.846317,33.538532,31.119034,0.043148518,-0.0060338974,0.0060338974,0.00897789,-0.04620886,-0.15423107,0.5801553,0.19400482,1.0557027,0.07820359,1.0557027,"up","ACSF3",197322.0,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from direct assay /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006633 // fatty acid biosynthetic process // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation /// 0090410 // malonate catabolic process // inferred from direct assay","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016878 // acid-thiol ligase activity // inferred from direct assay /// 0090409 // malonyl-CoA synthetase activity // inferred from direct assay","chr16:89202955-89222254 (+) // 99.8 // q24.3"]
["11731440_a_at",239.20732,231.33754,247.9316,235.7073,227.80641,231.5789,0.034011364,-0.014251232,0.085692406,0.012746334,-0.036441803,-0.012746334,0.60296345,0.21535543,1.0333279,0.04729818,1.0333279,"up","IFT57",55081.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from direct assay /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0042981 // regulation of apoptotic process // inferred from direct assay","0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0005932 // microtubule basal body // inferred from sequence or structural similarity /// 0005932 // microtubule basal body // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr3:107879658-107941417 (-) // 94.57 // q13.12"]
["11718683_s_at",6.145342,7.149976,6.4422817,6.231593,5.725972,6.6629124,-0.044093132,0.17435193,0.023985386,-0.023985386,-0.14606571,0.07256651,0.7430249,0.40568152,1.0598863,0.083909556,1.0598863,"up","AFP",174.0,"0001542 // ovulation from ovarian follicle // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0019953 // sexual reproduction // inferred from electronic annotation /// 0031016 // pancreas development // inferred from electronic annotation /// 0031100 // organ regeneration // inferred from electronic annotation /// 0042448 // progesterone metabolic process // inferred from electronic annotation /// 0060395 // SMAD protein signal transduction // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0046872 // metal ion binding // inferred from electronic annotation","chr4:74301879-74321891 (+) // 97.83 // q13.3"]
["11740271_at",8.327245,8.881239,8.315492,9.437633,10.287348,8.500468,-0.061312437,0.031609535,-0.0633502,0.119273424,0.24364758,-0.031609297,0.55869377,0.17347275,-1.103017,-0.141455,1.103017,"down","KIAA1383",54627.0,"","","","chr1:232940637-232946092 (+) // 94.45 // q42.2"]
["11743659_a_at",60.682465,59.149296,66.77174,55.972317,60.243256,62.313793,0.0052399635,-0.031678677,0.14319801,-0.111326694,-0.0052399635,0.04351139,0.7511974,0.41809735,1.0448323,0.06327147,1.0448323,"up","SNRNP27",11017.0,"0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // non-traceable author statement","chr2:70120691-70132348 (+) // 76.16 // p13.3"]
["11738627_a_at",17.037205,15.804835,16.53448,20.237,14.482759,18.233835,0.021605492,-0.08671713,-0.021605492,0.26991224,-0.21274686,0.11953497,0.8373791,0.5800539,-1.0627526,-0.08780579,1.0627526,"down","ARHGAP6",395.0,"0007015 // actin filament organization // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007202 // activation of phospholipase C activity // inferred from direct assay /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007266 // Rho protein signal transduction // non-traceable author statement /// 0007266 // Rho protein signal transduction // traceable author statement /// 0010518 // positive regulation of phospholipase activity // inferred from direct assay /// 0030041 // actin filament polymerization // non-traceable author statement /// 0032321 // positive regulation of Rho GTPase activity // inferred from sequence or structural similarity /// 0032321 // positive regulation of Rho GTPase activity // inferred from electronic annotation /// 0043087 // regulation of GTPase activity // inferred from sequence or structural similarity /// 0043087 // regulation of GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0048041 // focal adhesion assembly // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement /// 0051497 // negative regulation of stress fiber assembly // inferred from mutant phenotype /// 0051895 // negative regulation of focal adhesion assembly // inferred from mutant phenotype","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from mutant phenotype /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005884 // actin filament // non-traceable author statement /// 0015629 // actin cytoskeleton // inferred from sequence or structural similarity /// 0015629 // actin cytoskeleton // inferred from electronic annotation","0005070 // SH3/SH2 adaptor activity // traceable author statement /// 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005100 // Rho GTPase activator activity // inferred from sequence or structural similarity /// 0005100 // Rho GTPase activator activity // inferred from electronic annotation /// 0016004 // phospholipase activator activity // inferred from direct assay /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0043274 // phospholipase binding // inferred from physical interaction","chrX:11161516-11683821 (-) // 97.28 // p22.2"]
["11760539_a_at",10.443654,9.50918,9.400724,11.604133,9.056737,9.827006,0.111518145,-0.023715734,-0.040264606,0.26353002,-0.09404516,0.023715496,0.8897415,0.69622684,-1.034228,-0.048554223,1.034228,"down","IBTK",25998.0,"0001933 // negative regulation of protein phosphorylation // inferred from direct assay /// 0051209 // release of sequestered calcium ion into cytosol // inferred from direct assay /// 0061099 // negative regulation of protein tyrosine kinase activity // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0019901 // protein kinase binding // inferred from direct assay /// 0030292 // protein tyrosine kinase inhibitor activity // inferred from direct assay","chr6:82901047-82957471 (-) // 100.0 // q14.1"]
["11715669_s_at",269.1066,271.38086,249.03918,260.51538,235.9264,261.99576,0.04272175,0.054862976,-0.06908369,-0.004087448,-0.14711905,0.004087448,0.74266934,0.4052505,1.0414114,0.058540102,1.0414114,"up","DCTN1",1639.0,"0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0007067 // mitosis // non-traceable author statement /// 0007399 // nervous system development // non-traceable author statement /// 0008219 // cell death // inferred from electronic annotation /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement","0000776 // kinetochore // inferred from direct assay /// 0000922 // spindle pole // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005868 // cytoplasmic dynein complex // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0005874 // microtubule // inferred from electronic annotation /// 0030286 // dynein complex // inferred from electronic annotation /// 0031252 // cell leading edge // inferred from electronic annotation","0003774 // motor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr2:74588284-74607482 (-) // 92.76 // p13.1"]
["11726170_at",17.54144,19.913399,18.692642,17.505796,20.636698,19.303022,-0.114881516,0.068090916,-0.0231781,-0.11781597,0.11956358,0.0231781,0.9067102,0.73410577,-1.0221674,-0.031631548,1.0221674,"down","FLT4",2324.0,"0001525 // angiogenesis // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from mutant phenotype /// 0001938 // positive regulation of endothelial cell proliferation // inferred from mutant phenotype /// 0001944 // vasculature development // inferred from sequence or structural similarity /// 0001944 // vasculature development // inferred from electronic annotation /// 0001945 // lymph vessel development // inferred from sequence or structural similarity /// 0001945 // lymph vessel development // inferred from electronic annotation /// 0001946 // lymphangiogenesis // inferred from mutant phenotype /// 0001946 // lymphangiogenesis // inferred from sequence or structural similarity /// 0001946 // lymphangiogenesis // inferred from electronic annotation /// 0002040 // sprouting angiogenesis // inferred from sequence or structural similarity /// 0002040 // sprouting angiogenesis // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // traceable author statement /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from genetic interaction /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0010575 // positive regulation vascular endothelial growth factor production // inferred from mutant phenotype /// 0010595 // positive regulation of endothelial cell migration // inferred from mutant phenotype /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0030307 // positive regulation of cell growth // inferred from electronic annotation /// 0035924 // cellular response to vascular endothelial growth factor stimulus // inferred from direct assay /// 0035924 // cellular response to vascular endothelial growth factor stimulus // inferred from mutant phenotype /// 0038084 // vascular endothelial growth factor signaling pathway // inferred from direct assay /// 0038084 // vascular endothelial growth factor signaling pathway // inferred from mutant phenotype /// 0038084 // vascular endothelial growth factor signaling pathway // traceable author statement /// 0038084 // vascular endothelial growth factor signaling pathway // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043410 // positive regulation of MAPK cascade // inferred from mutant phenotype /// 0046330 // positive regulation of JNK cascade // inferred from mutant phenotype /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0048010 // vascular endothelial growth factor receptor signaling pathway // inferred from direct assay /// 0048010 // vascular endothelial growth factor receptor signaling pathway // inferred from genetic interaction /// 0048010 // vascular endothelial growth factor receptor signaling pathway // inferred from mutant phenotype /// 0048010 // vascular endothelial growth factor receptor signaling pathway // traceable author statement /// 0048010 // vascular endothelial growth factor receptor signaling pathway // inferred from electronic annotation /// 0048514 // blood vessel morphogenesis // inferred from sequence or structural similarity /// 0048514 // blood vessel morphogenesis // inferred from electronic annotation /// 0060312 // regulation of blood vessel remodeling // inferred from sequence or structural similarity /// 0060312 // regulation of blood vessel remodeling // inferred from electronic annotation /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from mutant phenotype /// 0090037 // positive regulation of protein kinase C signaling cascade // inferred from mutant phenotype","0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from mutant phenotype /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0005021 // vascular endothelial growth factor-activated receptor activity // inferred from direct assay /// 0005021 // vascular endothelial growth factor-activated receptor activity // inferred from mutant phenotype /// 0005021 // vascular endothelial growth factor-activated receptor activity // inferred from electronic annotation /// 0005021 // vascular endothelial growth factor-activated receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019838 // growth factor binding // inferred from physical interaction /// 0019838 // growth factor binding // inferred from electronic annotation /// 0019903 // protein phosphatase binding // inferred from physical interaction","chr5:180028505-180076678 (-) // 99.74 // q35.3"]
["11752178_a_at",10.032304,10.10921,10.816244,11.668011,11.310209,9.41908,-0.05978203,-0.048764467,0.048764706,0.15812373,0.11319089,-0.1507771,0.8419195,0.58855104,-1.0425427,-0.060106467,1.0425427,"down","SEMA4D",10507.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from direct assay /// 0006916 // anti-apoptosis // traceable author statement /// 0006955 // immune response // traceable author statement /// 0007155 // cell adhesion // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0008360 // regulation of cell shape // inferred from mutant phenotype /// 0010693 // negative regulation of alkaline phosphatase activity // inferred from mutant phenotype /// 0010693 // negative regulation of alkaline phosphatase activity // inferred from electronic annotation /// 0014068 // positive regulation of phosphatidylinositol 3-kinase cascade // inferred from mutant phenotype /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0030335 // positive regulation of cell migration // inferred from sequence or structural similarity /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0031344 // regulation of cell projection organization // inferred from mutant phenotype /// 0032321 // positive regulation of Rho GTPase activity // inferred from mutant phenotype /// 0032321 // positive regulation of Rho GTPase activity // inferred from sequence or structural similarity /// 0032321 // positive regulation of Rho GTPase activity // inferred from electronic annotation /// 0043931 // ossification involved in bone maturation // inferred from mutant phenotype /// 0043931 // ossification involved in bone maturation // inferred from electronic annotation /// 0045668 // negative regulation of osteoblast differentiation // inferred from sequence or structural similarity /// 0045668 // negative regulation of osteoblast differentiation // inferred from electronic annotation /// 0048672 // positive regulation of collateral sprouting // inferred from mutant phenotype /// 0048814 // regulation of dendrite morphogenesis // inferred from mutant phenotype /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from sequence or structural similarity /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0050732 // negative regulation of peptidyl-tyrosine phosphorylation // inferred from sequence or structural similarity /// 0050732 // negative regulation of peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0050772 // positive regulation of axonogenesis // inferred from electronic annotation /// 0061383 // trabecula morphogenesis // inferred from sequence or structural similarity /// 0061383 // trabecula morphogenesis // inferred from electronic annotation /// 0070486 // leukocyte aggregation // inferred from mutant phenotype /// 0071526 // semaphorin-plexin signaling pathway // inferred from mutant phenotype","0005615 // extracellular space // inferred from sequence or structural similarity /// 0005615 // extracellular space // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from direct assay /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from mutant phenotype /// 0005102 // receptor binding // inferred from direct assay /// 0005102 // receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0030215 // semaphorin receptor binding // inferred from sequence or structural similarity /// 0030215 // semaphorin receptor binding // inferred from electronic annotation","chr9:91977153-92070868 (-) // 88.04 // q22.2"]
["11742535_x_at",51.174217,55.62674,51.736668,66.85928,60.001083,63.774902,-0.17496634,-0.054605007,-0.15919638,0.2107439,0.054605007,0.1426053,0.20247352,0.01074776,-1.2021142,-0.26557398,1.2021142,"down","FAM58BP",339521.0,"0000079 // regulation of cyclin-dependent protein kinase activity // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","","0019901 // protein kinase binding // inferred from electronic annotation","chr1:200182655-200183643 (+) // 94.74 // q32.1"]
["11723101_a_at",185.97745,176.26157,186.03308,178.84676,170.79749,177.59421,0.061473846,-0.015935898,0.061905384,0.0050697327,-0.061367035,-0.0050697327,0.54794884,0.16449349,1.0397741,0.056270067,1.0397741,"up","DDX10",1662.0,"","","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003724 // RNA helicase activity // traceable author statement /// 0004386 // helicase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr11:108535803-108811654 (+) // 96.83 // q22.3"]
["11721897_a_at",201.95236,187.86415,191.31856,218.71007,214.01747,220.07301,-0.041856766,-0.14618206,-0.119894505,0.073147774,0.041857243,0.082110405,0.17863429,0.007450543,-1.1237721,-0.16834955,1.1237721,"down","DHX58",79132.0,"0009615 // response to virus // inferred from sequence or structural similarity /// 0009615 // response to virus // inferred from electronic annotation /// 0032480 // negative regulation of type I interferon production // inferred from direct assay /// 0032481 // positive regulation of type I interferon production // inferred from sequence or structural similarity /// 0039534 // negative regulation of MDA-5 signaling pathway // inferred from mutant phenotype /// 0039536 // negative regulation of RIG-I signaling pathway // inferred from direct assay /// 0039536 // negative regulation of RIG-I signaling pathway // inferred from mutant phenotype /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045087 // innate immune response // inferred from electronic annotation /// 0045088 // regulation of innate immune response // inferred from direct assay /// 0045824 // negative regulation of innate immune response // inferred from direct assay /// 1900245 // positive regulation of MDA-5 signaling pathway // inferred from sequence or structural similarity /// 1900246 // positive regulation of RIG-I signaling pathway // inferred from sequence or structural similarity","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003725 // double-stranded RNA binding // inferred from direct assay /// 0003727 // single-stranded RNA binding // inferred from direct assay /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016817 // hydrolase activity, acting on acid anhydrides // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:40253421-40264751 (-) // 96.64 // q21.2"]
["11753099_a_at",36.85843,30.234407,35.45368,38.422127,36.813713,28.988226,0.028905392,-0.25689793,-0.027153969,0.088848114,0.027153969,-0.31762218,0.9726067,0.91320854,-1.012444,-0.01784214,1.012444,"down","SORBS3",10174.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006936 // muscle contraction // traceable author statement /// 0007155 // cell adhesion // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0031589 // cell-substrate adhesion // inferred from electronic annotation /// 0043410 // positive regulation of MAPK cascade // inferred from electronic annotation /// 0051495 // positive regulation of cytoskeleton organization // non-traceable author statement /// 0051496 // positive regulation of stress fiber assembly // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0005925 // focal adhesion // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","0005200 // structural constituent of cytoskeleton // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0017166 // vinculin binding // inferred from physical interaction","chr8:22409439-22424207 (+) // 99.92 // p21.3"]
["11757127_at",10.300293,9.096207,9.795205,9.269608,11.65638,10.144844,0.04723835,-0.13211036,-0.02529955,-0.10486698,0.22567272,0.02529955,0.7875614,0.47828242,-1.0610007,-0.085425615,1.0610007,"down","SNORA23",677808.0,"","","","chr11:9450312-9450501 (+) // 99.47 // p15.4"]
["11737769_a_at",174.37405,159.01959,182.71727,184.70743,170.47585,182.83386,-0.033713818,-0.16669464,0.033713818,0.049342155,-0.06633186,0.03463459,0.7559557,0.42470858,-1.0435115,-0.061446514,1.0435115,"down","MYO1C",4641.0,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0051028 // mRNA transport // inferred from electronic annotation","0001725 // stress fiber // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005643 // nuclear pore // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005902 // microvillus // inferred from direct assay /// 0005903 // brush border // inferred from electronic annotation /// 0009925 // basal plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016328 // lateral plasma membrane // inferred from direct assay /// 0016459 // myosin complex // inferred from electronic annotation /// 0016461 // unconventional myosin complex // traceable author statement /// 0031941 // filamentous actin // inferred from direct assay /// 0032420 // stereocilium // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0045160 // myosin I complex // inferred from electronic annotation /// 0060171 // stereocilium membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003774 // motor activity // inferred from electronic annotation /// 0003779 // actin binding // inferred from electronic annotation /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008022 // protein C-terminus binding // inferred from electronic annotation","chr17:1367481-1389495 (-) // 87.7 // p13.3"]
["11725994_a_at",76.64594,81.54621,76.5246,75.67508,77.773674,74.55006,0.0011429787,0.09055138,-0.0011429787,-0.017248154,0.022215843,-0.038856983,0.67301005,0.3026113,1.0291692,0.04148019,1.0291692,"up","MRPL11",65003.0,"0006412 // translation // non-traceable author statement /// 0006412 // translation // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005761 // mitochondrial ribosome // non-traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003735 // structural constituent of ribosome // non-traceable author statement /// 0003735 // structural constituent of ribosome // inferred from electronic annotation","chr11:66202549-66206299 (-) // 84.49 // q13.2"]
["11734788_at",7.258658,7.4927406,7.684099,7.4551272,9.353316,7.9172773,-0.06398201,-0.018191338,0.018191338,-0.025451899,0.3017931,0.06131959,0.634611,0.2545351,-1.0972414,-0.13388096,1.0972414,"down","OLFM3",118427.0,"0042462 // eye photoreceptor cell development // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation","","chr1:102268126-102462790 (-) // 96.6 // p21.1"]
["11734033_at",37.66367,37.35521,42.991276,43.074535,38.951283,47.47439,-0.11968374,-0.13154793,0.07118654,0.07397795,-0.07118654,0.21429205,0.6523432,0.27745882,-1.0960976,-0.13237625,1.0960976,"down","C15orf61",145853.0,"","0005576 // extracellular region // inferred from electronic annotation","","chr15:67813405-67819735 (+) // 100.0 // q23"]
["11722956_at",48.04277,48.384106,50.114586,52.73357,46.689827,53.030807,-0.035562515,-0.025348663,0.025348663,0.09883976,-0.07677364,0.10694885,0.75978506,0.4318344,-1.0387577,-0.054859146,1.0387577,"down","GLTPD2",388323.0,"0046836 // glycolipid transport // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0017089 // glycolipid transporter activity // inferred from electronic annotation /// 0051861 // glycolipid binding // inferred from electronic annotation","chr17:4692253-4693685 (+) // 99.61 // p13.2"]
["11744500_a_at",293.80814,286.4548,288.26144,280.90247,281.32614,278.10352,0.049598694,0.0130319595,0.022102356,-0.015206337,-0.0130319595,-0.02965355,0.24539086,0.017437432,1.0335023,0.047541656,1.0335023,"up","ASXL1",171023.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0032526 // response to retinoic acid // inferred from sequence or structural similarity /// 0035359 // negative regulation of peroxisome proliferator activated receptor signaling pathway // inferred from sequence or structural similarity /// 0035522 // monoubiquitinated histone H2A deubiquitination // inferred from direct assay /// 0045599 // negative regulation of fat cell differentiation // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0048386 // positive regulation of retinoic acid receptor signaling pathway // inferred from sequence or structural similarity /// 0048387 // negative regulation of retinoic acid receptor signaling pathway // inferred from sequence or structural similarity","0000790 // nuclear chromatin // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0035517 // PR-DUB complex // inferred from direct assay","0003713 // transcription coactivator activity // inferred from sequence or structural similarity /// 0003714 // transcription corepressor activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0042974 // retinoic acid receptor binding // inferred from sequence or structural similarity /// 0042975 // peroxisome proliferator activated receptor binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation","chr20:30947549-31027121 (+) // 99.97 // q11.21"]
["11763440_at",41.651684,39.40849,41.74554,35.14139,42.70201,37.57663,0.03993416,-0.03993416,0.04318142,-0.20526934,0.07586336,-0.10860491,0.7008578,0.34111422,1.0671262,0.09373074,1.0671262,"up","MLPH",79083.0,"0006605 // protein targeting // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0030318 // melanocyte differentiation // inferred from electronic annotation /// 0032400 // melanosome localization // inferred from electronic annotation /// 0043473 // pigmentation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0017022 // myosin binding // inferred from electronic annotation /// 0017137 // Rab GTPase binding // inferred from electronic annotation /// 0031489 // myosin V binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051010 // microtubule plus-end binding // inferred from electronic annotation","chr2:238457795-238460620 (+) // 73.7 // q37.3"]
["11761552_at",35.722992,37.244797,35.184624,39.563168,43.66843,41.22114,-0.10374546,-0.04355955,-0.12565327,0.04355955,0.18599224,0.102786064,0.22368346,0.013706797,-1.1501049,-0.20176543,1.1501049,"down","C15orf29",79768.0,"","0005730 // nucleolus // inferred from direct assay","","chr15:34440436-34502262 (-) // 76.25 // q14"]
["11744354_a_at",88.03279,94.60075,79.19104,86.8865,79.902695,82.311,0.057932377,0.16174316,-0.09477091,0.039022923,-0.08186436,-0.0390234,0.7699168,0.4503378,1.0489335,0.06892323,1.0489335,"up","TATDN2",9797.0,"0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0004518 // nuclease activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016888 // endodeoxyribonuclease activity, producing 5'-phosphomonoesters // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:10290218-10323014 (+) // 99.07 // p25.3"]
["11741030_a_at",185.3514,187.38144,198.97897,205.37401,204.10776,202.02802,-0.113322735,-0.09760761,-0.010969639,0.03466797,0.025744915,0.010969639,0.33285198,0.03986297,-1.0701113,-0.09776082,1.0701113,"down","PTCD2",79810.0,"0001822 // kidney development // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0007005 // mitochondrion organization // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0048747 // muscle fiber development // inferred from electronic annotation /// 0050684 // regulation of mRNA processing // inferred from electronic annotation /// 0055010 // ventricular cardiac muscle tissue morphogenesis // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation","","chr5:71616199-71655180 (+) // 99.9 // q13.2"]
["11721240_at",115.21662,128.54836,110.0452,109.99171,119.69355,121.784676,-0.027497768,0.13046408,-0.09375143,-0.09445238,0.027497768,0.052485466,0.9770133,0.92661184,1.0054872,0.007894721,1.0054872,"up","ZNF787",126208.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:56598731-56632678 (-) // 86.34 // q13.43"]
["11718047_a_at",225.32574,214.45422,234.01508,221.92834,231.78061,219.6906,0.010958672,-0.060383797,0.06554794,-0.010959148,0.051706314,-0.025580883,0.9981676,0.9945013,1.000221,3.188206E-4,1.000221,"up","ITPK1",3705.0,"0007165 // signal transduction // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008152 // metabolic process // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0032957 // inositol trisphosphate metabolic process // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0003824 // catalytic activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047325 // inositol tetrakisphosphate 1-kinase activity // inferred from electronic annotation /// 0052725 // inositol-1,3,4-trisphosphate 6-kinase activity // inferred from electronic annotation /// 0052726 // inositol-1,3,4-trisphosphate 5-kinase activity // inferred from electronic annotation","chr14:93403258-93582263 (-) // 91.79 // q32.12"]
["11720597_s_at",178.90825,174.7101,175.28914,184.17755,169.99994,178.4971,0.01640129,-0.017855644,-0.013082027,0.058279037,-0.057284355,0.013082027,0.9333221,0.8003172,-1.0066329,-0.00953769,1.0066329,"down","CSRNP2",81566.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0010923 // negative regulation of phosphatase activity // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from sequence or structural similarity /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019902 // phosphatase binding // inferred from direct assay","chr12:51454989-51477377 (-) // 97.08 // q13.12"]
["11717857_a_at",398.9221,390.02527,399.57077,406.0732,406.0732,402.15384,-0.00699234,-0.039531708,-0.0046482086,0.018640518,0.018640518,0.0046482086,0.39280275,0.06352107,-1.021744,-0.03103379,1.021744,"down","DHX29",54505.0,"0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr5:54551890-54603521 (-) // 96.85 // q11.2"]
["11723794_a_at",110.92185,108.92742,96.32323,106.2336,117.14352,111.514046,0.013088226,-0.013088226,-0.19049978,-0.049215317,0.09182119,0.020770073,0.6909688,0.32682467,-1.0604123,-0.08462529,1.0604123,"down","SLC29A2",3177.0,"0006139 // nucleobase-containing compound metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007595 // lactation // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0015853 // adenine transport // inferred from electronic annotation /// 0015854 // guanine transport // inferred from electronic annotation /// 0015858 // nucleoside transport // inferred from direct assay /// 0015858 // nucleoside transport // inferred from electronic annotation /// 0015858 // nucleoside transport // traceable author statement /// 0015862 // uridine transport // inferred from electronic annotation /// 0032869 // cellular response to insulin stimulus // inferred from electronic annotation /// 0035344 // hypoxanthine transport // inferred from electronic annotation /// 0035364 // thymine transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from direct assay /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation","0005337 // nucleoside transmembrane transporter activity // inferred from electronic annotation /// 0005337 // nucleoside transmembrane transporter activity // traceable author statement","chr11:66129558-66139961 (-) // 85.71 // q13.2"]
["11744478_s_at",10.798131,8.757337,9.300557,9.794693,9.820499,8.986575,0.178051,-0.12416649,-0.037341356,0.037341595,0.041137695,-0.08688712,0.98126906,0.9372068,1.0057815,0.008316967,1.0057815,"up","HBG1 /// HBG2 /// LOC100653006 /// LOC100653319","100653006 /// 100653319 /// 3047 /// 3048","0002026 // regulation of the force of heart contraction // inferred from mutant phenotype /// 0006810 // transport // inferred from electronic annotation /// 0007517 // muscle organ development // non-traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0015671 // oxygen transport // inferred from electronic annotation /// 0030049 // muscle filament sliding // traceable author statement /// 0032781 // positive regulation of ATPase activity // inferred from mutant phenotype /// 0060048 // cardiac muscle contraction // inferred from mutant phenotype","0005829 // cytosol // traceable author statement /// 0005833 // hemoglobin complex // inferred from electronic annotation /// 0005859 // muscle myosin complex // non-traceable author statement /// 0016459 // myosin complex // inferred from electronic annotation /// 0031672 // A band // inferred from mutant phenotype","0003785 // actin monomer binding // inferred from direct assay /// 0005344 // oxygen transporter activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0008307 // structural constituent of muscle // non-traceable author statement /// 0019825 // oxygen binding // inferred from electronic annotation /// 0020037 // heme binding // inferred from electronic annotation /// 0032038 // myosin II heavy chain binding // non-traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051015 // actin filament binding // inferred from mutant phenotype","chr11:5274421-5276011 (-) // 89.95 // p15.4"]
["11751574_a_at",75.0434,76.65066,66.486824,79.44098,77.357895,69.52992,-0.015286446,0.015286446,-0.18994331,0.06687164,0.028536797,-0.12537766,0.8347612,0.5722973,-1.0376534,-0.053324696,1.0376534,"down","TMEM119",338773.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr12:108985051-108991833 (-) // 97.52 // q23.3"]
["11758986_at",42.435825,45.30648,37.43859,41.33535,42.311348,41.00385,0.021072388,0.115507126,-0.15968418,-0.016834259,0.016834259,-0.028450966,0.99489474,0.9836755,1.001236,0.0017820151,1.001236,"up","ZNF48",197407.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:30406770-30411429 (+) // 90.37 // p11.2"]
["11759807_a_at",7.940191,7.9316688,6.6957717,8.199846,7.233596,7.5108604,0.040872335,0.03932309,-0.20505095,0.08729577,-0.09358835,-0.03932309,0.9333221,0.80031145,-1.018477,-0.026413348,1.018477,"down","TXLNG2P",246126.0,"","","","chrY:21729672-21751733 (+) // 84.18 // q11.222"]
["11722339_a_at",53.98919,52.543182,66.80026,61.390957,60.34531,59.420273,-0.14942741,-0.18859434,0.15775585,0.035927773,0.011143684,-0.011143208,0.8239848,0.5493474,-1.05122,-0.07206471,1.05122,"down","DIAPH2",1730.0,"0000910 // cytokinesis // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007292 // female gamete generation // traceable author statement /// 0016043 // cellular component organization // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030041 // actin filament polymerization // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0048477 // oogenesis // inferred from electronic annotation","0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0003779 // actin binding // inferred from electronic annotation /// 0005102 // receptor binding // traceable author statement /// 0017048 // Rho GTPase binding // inferred from electronic annotation","chrX:95939661-96724837 (+) // 99.5 // q21.33"]
["11726523_s_at",925.97217,935.451,952.7753,947.73566,907.4942,944.92505,-0.021962166,-0.0072689056,0.019205093,0.011553764,-0.051042557,0.0072689056,0.9214787,0.7687339,1.005141,0.0073979236,1.005141,"up","ZFHX3",463.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from genetic interaction /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0007517 // muscle organ development // inferred from electronic annotation /// 0045662 // negative regulation of myoblast differentiation // inferred from direct assay /// 0045663 // positive regulation of myoblast differentiation // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:72816787-73082274 (-) // 95.7 // q22.2"]
["11728566_x_at",107.87396,111.936455,111.895546,111.34173,107.04924,107.67093,-0.02282381,0.030509472,0.029982567,0.02282381,-0.03389597,-0.025541782,0.72479624,0.3782088,1.017311,0.024760757,1.017311,"up","FAM210A",125228.0,"","0005739 // mitochondrion // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr18:13663345-13726591 (-) // 82.65 // p11.21"]
["11746202_x_at",41.72096,52.91378,57.861996,50.86909,58.352425,54.43898,-0.36336946,-0.020498276,0.108474255,-0.077352524,0.120651245,0.020498276,0.7967644,0.49818182,-1.0815223,-0.11306347,1.0815223,"down","NAB1",4664.0,"0001958 // endochondral ossification // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0014037 // Schwann cell differentiation // inferred from electronic annotation /// 0042552 // myelination // inferred from electronic annotation /// 0045682 // regulation of epidermis development // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // non-traceable author statement /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0008134 // transcription factor binding // inferred from electronic annotation","chr2:191513759-191555999 (+) // 95.63 // q32.2"]
["11754138_s_at",1250.7833,1234.1797,1319.169,1250.5651,1201.5074,1258.9025,1.2588501E-4,-0.019153595,0.07692337,-1.2588501E-4,-0.057860374,0.009460449,0.7267884,0.38141093,1.0248934,0.035473865,1.0248934,"up","PSPH",5723.0,"0006563 // L-serine metabolic process // inferred from direct assay /// 0006563 // L-serine metabolic process // traceable author statement /// 0006564 // L-serine biosynthetic process // not recorded /// 0006564 // L-serine biosynthetic process // traceable author statement /// 0006564 // L-serine biosynthetic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008652 // cellular amino acid biosynthetic process // traceable author statement /// 0008652 // cellular amino acid biosynthetic process // inferred from electronic annotation /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0031667 // response to nutrient levels // inferred from electronic annotation /// 0033574 // response to testosterone stimulus // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005737 // cytoplasm // not recorded /// 0005829 // cytosol // traceable author statement /// 0019717 // synaptosome // inferred from electronic annotation","0000287 // magnesium ion binding // inferred from direct assay /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004647 // phosphoserine phosphatase activity // inferred from direct assay /// 0004647 // phosphoserine phosphatase activity // traceable author statement /// 0004647 // phosphoserine phosphatase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:56079260-56088925 (-) // 49.3 // p11.2"]
["11722719_s_at",322.54077,328.04068,314.19138,333.85715,320.48434,327.20688,-0.010360718,0.014032364,-0.0481987,0.039388657,-0.01958847,0.010360718,0.7220225,0.37314412,-1.0174063,-0.024895996,1.0174063,"down","BAIAP2",10458.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007409 // axonogenesis // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0009617 // response to bacterium // inferred from mutant phenotype /// 0016358 // dendrite development // inferred from electronic annotation /// 0032956 // regulation of actin cytoskeleton organization // inferred from mutant phenotype /// 0046847 // filopodium assembly // inferred from electronic annotation /// 0048167 // regulation of synaptic plasticity // inferred from electronic annotation /// 0051017 // actin filament bundle assembly // inferred from electronic annotation","0001726 // ruffle // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from direct assay /// 0030175 // filopodium // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // traceable author statement /// 0008093 // cytoskeletal adaptor activity // inferred from electronic annotation /// 0008093 // cytoskeletal adaptor activity // traceable author statement /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0070064 // proline-rich region binding // inferred from direct assay","chr17:79008946-79084378 (+) // 98.74 // q25.3"]
["11763392_at",10.868855,11.226422,11.539339,11.210126,10.754378,10.517494,-0.022301197,0.024396896,0.06405926,0.022301197,-0.037577152,-0.069710255,0.6250655,0.24218047,1.035538,0.050380435,1.035538,"up","LOC100132005",1.00132005E8,"","","","chr6:38147073-38149010 (+) // 99.64 // p21.2"]
["11763882_at",20.460571,21.910309,21.457945,19.385372,20.983505,21.194412,-0.043623447,0.05514002,0.025042057,-0.121501446,-0.0072140694,0.0072140694,0.7084968,0.35245603,1.0371946,0.052686613,1.0371946,"up","","","","","","chr9:128506035-128508208 (-) // 97.61 // q33.3"]
["11727631_s_at",31.373024,34.21576,35.21214,36.70939,34.06951,35.209938,-0.14579725,-0.020660877,0.020751,0.080827236,-0.026840687,0.020660877,0.6554555,0.2808555,-1.0522311,-0.073451556,1.0522311,"down","APBA2",321.0,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0035264 // multicellular organism growth // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation","0001540 // beta-amyloid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr15:29131174-29410518 (+) // 97.63 // q13.1"]
["11722485_a_at",223.54004,223.39528,224.48264,231.01671,216.5956,220.86145,4.6730042E-4,-4.6730042E-4,0.0065379143,0.047931194,-0.04506159,-0.016923904,0.93894535,0.8159767,1.0047692,0.0068641547,1.0047692,"up","UTP14C",9724.0,"0006364 // rRNA processing // inferred from electronic annotation /// 0007126 // meiosis // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0042254 // ribosome biogenesis // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0032040 // small-subunit processome // inferred from electronic annotation","","chr13:52586522-52607790 (+) // 88.83 // q14.3"]
["11724880_s_at",51.546455,52.077457,56.09429,47.361767,48.45047,49.65819,0.026920795,0.041706562,0.14890194,-0.095229626,-0.062441826,-0.026920795,0.32016227,0.036122367,1.0973628,0.13404052,1.0973628,"up","ZNF217",7764.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay","0000118 // histone deacetylase complex // inferred from direct assay /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr20:52183609-52199636 (-) // 99.06 // q13.2"]
["11738336_at",10.338747,11.027659,11.351701,10.74324,10.309424,12.159436,-0.074216366,0.018848896,0.0606308,-0.018848658,-0.078314066,0.15979862,0.9427099,0.82683295,-1.0133442,-0.019124249,1.0133442,"down","C7orf65",401335.0,"","","","chr7:47694841-47701246 (+) // 87.67 // p12.3"]
["11715348_x_at",106.79882,110.22258,111.25682,117.87399,131.99261,116.6733,-0.09328842,-0.047764778,-0.03429079,0.04906082,0.21227217,0.034290314,0.38099095,0.058351923,-1.1149578,-0.15698911,1.1149578,"down","HBB",3043.0,"0006810 // transport // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008217 // regulation of blood pressure // inferred from electronic annotation /// 0010942 // positive regulation of cell death // inferred from direct assay /// 0015671 // oxygen transport // non-traceable author statement /// 0015671 // oxygen transport // traceable author statement /// 0015671 // oxygen transport // inferred from electronic annotation /// 0030185 // nitric oxide transport // non-traceable author statement /// 0042542 // response to hydrogen peroxide // inferred from direct assay /// 0042744 // hydrogen peroxide catabolic process // inferred from direct assay /// 0045429 // positive regulation of nitric oxide biosynthetic process // non-traceable author statement /// 0050880 // regulation of blood vessel size // inferred from electronic annotation /// 0051291 // protein heterooligomerization // inferred from direct assay /// 0070293 // renal absorption // inferred from mutant phenotype","0005829 // cytosol // traceable author statement /// 0005833 // hemoglobin complex // inferred from direct assay /// 0005833 // hemoglobin complex // non-traceable author statement /// 0005833 // hemoglobin complex // traceable author statement /// 0005833 // hemoglobin complex // inferred from electronic annotation /// 0031838 // haptoglobin-hemoglobin complex // inferred from direct assay","0004601 // peroxidase activity // inferred from direct assay /// 0005344 // oxygen transporter activity // non-traceable author statement /// 0005344 // oxygen transporter activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019825 // oxygen binding // inferred from direct assay /// 0019825 // oxygen binding // inferred from electronic annotation /// 0020037 // heme binding // inferred from electronic annotation /// 0030492 // hemoglobin binding // inferred from direct assay /// 0031720 // haptoglobin binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:5246694-5248427 (-) // 79.06 // p15.4"]
["11739841_a_at",71.56125,70.102844,59.665424,75.253586,73.48906,76.45234,-0.019175053,-0.048880577,-0.28145838,0.053407192,0.01917553,0.07620716,0.49339762,0.12096161,-1.1220223,-0.1661013,1.1220223,"down","BCL6",604.0,"0000060 // protein import into nucleus, translocation // inferred from genetic interaction /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0000902 // cell morphogenesis // inferred from electronic annotation /// 0001953 // negative regulation of cell-matrix adhesion // inferred from electronic annotation /// 0002467 // germinal center formation // inferred from electronic annotation /// 0002634 // regulation of germinal center formation // non-traceable author statement /// 0002829 // negative regulation of type 2 immune response // inferred from electronic annotation /// 0002903 // negative regulation of B cell apoptotic process // non-traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from direct assay /// 0007266 // Rho protein signal transduction // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0008104 // protein localization // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030183 // B cell differentiation // inferred from electronic annotation /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0030890 // positive regulation of B cell proliferation // inferred from electronic annotation /// 0032319 // regulation of Rho GTPase activity // inferred from electronic annotation /// 0032764 // negative regulation of mast cell cytokine production // inferred from electronic annotation /// 0035024 // negative regulation of Rho protein signal transduction // inferred from electronic annotation /// 0042092 // type 2 immune response // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043380 // regulation of memory T cell differentiation // inferred from electronic annotation /// 0045596 // negative regulation of cell differentiation // inferred from electronic annotation /// 0045629 // negative regulation of T-helper 2 cell differentiation // inferred from electronic annotation /// 0045749 // negative regulation of S phase of mitotic cell cycle // non-traceable author statement /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-dependent // non-traceable author statement /// 0048294 // negative regulation of isotype switching to IgE isotypes // inferred from electronic annotation /// 0048821 // erythrocyte development // inferred from electronic annotation /// 0050727 // regulation of inflammatory response // inferred from electronic annotation /// 0050776 // regulation of immune response // non-traceable author statement /// 0051272 // positive regulation of cellular component movement // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005657 // replication fork // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from direct assay /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0031490 // chromatin DNA binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:187439164-187459050 (-) // 96.21 // q27.3"]
["11750146_a_at",11.193249,11.209911,10.482746,8.237992,10.203724,8.822711,0.11407256,0.11621857,0.01946044,-0.32819176,-0.01946044,-0.22926211,0.35117003,0.04606605,1.21046,0.27555534,1.21046,"up","TKTL1",8277.0,"0006007 // glucose catabolic process // traceable author statement /// 0006772 // thiamine metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004802 // transketolase activity // inferred from electronic annotation /// 0004802 // transketolase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chrX:153524123-153558282 (+) // 99.75 // q28"]
["11715895_at",47.735844,47.910378,54.151405,46.407204,48.909664,39.98678,-0.002632618,0.002632618,0.17929316,-0.043356895,0.03241396,-0.25818253,0.61543125,0.2298089,1.1091641,0.14947285,1.1091641,"up","SCARB2",950.0,"0006622 // protein targeting to lysosome // inferred from mutant phenotype /// 0006622 // protein targeting to lysosome // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from sequence or structural similarity /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0043202 // lysosomal lumen // inferred from sequence or structural similarity /// 0043202 // lysosomal lumen // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from electronic annotation","chr4:77079889-77135039 (-) // 89.53 // q21.1"]
["11750080_a_at",385.1833,388.08,352.5512,394.9827,373.26068,395.34213,-0.0054044724,0.0054044724,-0.13311672,0.03083992,-0.05076599,0.032152176,0.7437858,0.40633872,-1.0341516,-0.048447628,1.0341516,"down","DDB2",1643.0,"0000209 // protein polyubiquitination // inferred from direct assay /// 0000718 // nucleotide-excision repair, DNA damage removal // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006289 // nucleotide-excision repair // traceable author statement /// 0006290 // pyrimidine dimer repair // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0009411 // response to UV // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0051865 // protein autoubiquitination // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0043234 // protein complex // inferred from direct assay","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003684 // damaged DNA binding // traceable author statement /// 0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction","chr11:47236644-47260400 (+) // 99.09 // p11.2"]
["11737213_at",10.764407,10.127903,8.956313,9.386169,11.465963,9.593283,0.12705278,0.039119482,-0.13823915,-0.07060766,0.21814156,-0.03911972,0.94534135,0.83434176,-1.018769,-0.026827002,1.018769,"down","C12orf61",283416.0,"","","","chr12:62995530-62997470 (-) // 89.38 // q14.1"]
["11748483_a_at",7.12253,7.0559998,8.442768,7.0559998,6.8941216,8.069772,0.006769657,-0.006769657,0.25209594,-0.006769657,-0.0402534,0.18690777,0.91373295,0.75083524,1.0262653,0.03740368,1.0262653,"up","P2RX7",5027.0,"0000187 // activation of MAPK activity // inferred from electronic annotation /// 0000902 // cell morphogenesis // inferred from electronic annotation /// 0001845 // phagolysosome assembly // inferred from electronic annotation /// 0001916 // positive regulation of T cell mediated cytotoxicity // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from electronic annotation /// 0002028 // regulation of sodium ion transport // inferred from sequence or structural similarity /// 0002028 // regulation of sodium ion transport // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006509 // membrane protein ectodomain proteolysis // inferred from electronic annotation /// 0006649 // phospholipid transfer to membrane // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0006884 // cell volume homeostasis // inferred from electronic annotation /// 0006900 // membrane budding // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from electronic annotation /// 0007005 // mitochondrion organization // inferred from electronic annotation /// 0007009 // plasma membrane organization // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from sequence or structural similarity /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0009617 // response to bacterium // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0010043 // response to zinc ion // inferred from electronic annotation /// 0010467 // gene expression // inferred from electronic annotation /// 0010524 // positive regulation of calcium ion transport into cytosol // inferred from direct assay /// 0014049 // positive regulation of glutamate secretion // inferred from electronic annotation /// 0014054 // positive regulation of gamma-aminobutyric acid secretion // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0016079 // synaptic vesicle exocytosis // inferred from electronic annotation /// 0016485 // protein processing // inferred from electronic annotation /// 0019228 // regulation of action potential in neuron // inferred from electronic annotation /// 0019233 // sensory perception of pain // inferred from sequence or structural similarity /// 0019233 // sensory perception of pain // inferred from electronic annotation /// 0019835 // cytolysis // inferred from electronic annotation /// 0030501 // positive regulation of bone mineralization // inferred from sequence or structural similarity /// 0030501 // positive regulation of bone mineralization // inferred from electronic annotation /// 0031668 // cellular response to extracellular stimulus // inferred from electronic annotation /// 0032060 // bleb assembly // inferred from sequence or structural similarity /// 0032060 // bleb assembly // inferred from electronic annotation /// 0032308 // positive regulation of prostaglandin secretion // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0032731 // positive regulation of interleukin-1 beta production // inferred from electronic annotation /// 0032755 // positive regulation of interleukin-6 production // inferred from electronic annotation /// 0032963 // collagen metabolic process // inferred from electronic annotation /// 0033198 // response to ATP // inferred from direct assay /// 0033198 // response to ATP // inferred from electronic annotation /// 0034405 // response to fluid shear stress // inferred from electronic annotation /// 0035590 // purinergic nucleotide receptor signaling pathway // inferred from direct assay /// 0035590 // purinergic nucleotide receptor signaling pathway // inferred from electronic annotation /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0042098 // T cell proliferation // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from sequence or structural similarity /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043029 // T cell homeostasis // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043085 // positive regulation of catalytic activity // inferred from electronic annotation /// 0043132 // NAD transport // inferred from electronic annotation /// 0043409 // negative regulation of MAPK cascade // inferred from sequence or structural similarity /// 0043409 // negative regulation of MAPK cascade // inferred from electronic annotation /// 0043410 // positive regulation of MAPK cascade // inferred from electronic annotation /// 0044254 // multicellular organismal protein catabolic process // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045332 // phospholipid translocation // inferred from electronic annotation /// 0045778 // positive regulation of ossification // inferred from electronic annotation /// 0045779 // negative regulation of bone resorption // inferred from sequence or structural similarity /// 0045779 // negative regulation of bone resorption // inferred from electronic annotation /// 0045919 // positive regulation of cytolysis // inferred from sequence or structural similarity /// 0045919 // positive regulation of cytolysis // inferred from electronic annotation /// 0046513 // ceramide biosynthetic process // inferred from electronic annotation /// 0046931 // pore complex assembly // inferred from direct assay /// 0046931 // pore complex assembly // inferred from electronic annotation /// 0048705 // skeletal system morphogenesis // inferred from electronic annotation /// 0048873 // homeostasis of number of cells within a tissue // inferred from electronic annotation /// 0050714 // positive regulation of protein secretion // inferred from electronic annotation /// 0050715 // positive regulation of cytokine secretion // inferred from electronic annotation /// 0050717 // positive regulation of interleukin-1 alpha secretion // inferred from electronic annotation /// 0050718 // positive regulation of interleukin-1 beta secretion // inferred from direct assay /// 0050718 // positive regulation of interleukin-1 beta secretion // inferred from electronic annotation /// 0050830 // defense response to Gram-positive bacterium // inferred from electronic annotation /// 0051209 // release of sequestered calcium ion into cytosol // inferred from electronic annotation /// 0051259 // protein oligomerization // inferred from electronic annotation /// 0051495 // positive regulation of cytoskeleton organization // inferred from sequence or structural similarity /// 0051495 // positive regulation of cytoskeleton organization // inferred from electronic annotation /// 0051592 // response to calcium ion // inferred from electronic annotation /// 0051602 // response to electrical stimulus // inferred from electronic annotation /// 0051709 // regulation of killing of cells of other organism // non-traceable author statement /// 0051899 // membrane depolarization // inferred from direct assay /// 0051899 // membrane depolarization // inferred from electronic annotation /// 0051901 // positive regulation of mitochondrial depolarization // inferred from electronic annotation /// 0072593 // reactive oxygen species metabolic process // inferred from electronic annotation","0005639 // integral to nuclear inner membrane // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred by curator /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from electronic annotation /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0031594 // neuromuscular junction // inferred from electronic annotation /// 0032059 // bleb // inferred from sequence or structural similarity /// 0032059 // bleb // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043195 // terminal button // inferred from electronic annotation /// 0045121 // membrane raft // inferred from electronic annotation","0000287 // magnesium ion binding // inferred from electronic annotation /// 0001530 // lipopolysaccharide binding // inferred from sequence or structural similarity /// 0001530 // lipopolysaccharide binding // inferred from electronic annotation /// 0001614 // purinergic nucleotide receptor activity // inferred from direct assay /// 0001614 // purinergic nucleotide receptor activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004931 // extracellular ATP-gated cation channel activity // inferred from direct assay /// 0004931 // extracellular ATP-gated cation channel activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from sequence or structural similarity /// 0005102 // receptor binding // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005507 // copper ion binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred by curator /// 0005524 // ATP binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0015267 // channel activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // non-traceable author statement","chr12:121570682-121622605 (+) // 97.42 // q24.31"]
["11754111_s_at",28.436958,28.722454,27.889986,27.46066,30.317825,26.706306,0.014009953,0.028421879,-0.014009953,-0.03639078,0.10640907,-0.07657671,0.9499025,0.84764665,1.0081149,0.011660128,1.0081149,"up","PNOC",5368.0,"0007165 // signal transduction // traceable author statement /// 0007218 // neuropeptide signaling pathway // inferred from electronic annotation /// 0007268 // synaptic transmission // inferred from electronic annotation /// 0007600 // sensory perception // traceable author statement","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation","0001515 // opioid peptide activity // inferred from electronic annotation /// 0005184 // neuropeptide hormone activity // traceable author statement","chr8:28174801-28197003 (+) // 100.0 // p21.1"]
["11720167_at",8.5770445,8.402604,7.4831467,9.401822,8.22431,8.212205,0.045114994,0.015470982,-0.15172052,0.17757487,-0.015470982,-0.017596006,0.75801224,0.4278599,-1.0559543,-0.07854745,1.0559543,"down","SELL",6402.0,"0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0033198 // response to ATP // inferred from electronic annotation /// 0050776 // regulation of immune response // traceable author statement /// 0050900 // leukocyte migration // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0002020 // protease binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008201 // heparin binding // traceable author statement /// 0030246 // carbohydrate binding // traceable author statement /// 0030246 // carbohydrate binding // inferred from electronic annotation /// 0043208 // glycosphingolipid binding // traceable author statement /// 0050839 // cell adhesion molecule binding // inferred from electronic annotation","chr1:169659809-169680843 (-) // 97.84 // q24.2"]
["11743716_a_at",49.930355,53.274826,47.847,49.12907,49.313393,48.5146,0.020638943,0.1141758,-0.040849686,-0.0027012825,0.0027012825,-0.020859241,0.769199,0.44877544,1.0268852,0.038274836,1.0268852,"up","BRWD1",54014.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0007010 // cytoskeleton organization // inferred from mutant phenotype /// 0008360 // regulation of cell shape // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","","chr21:40557403-40685556 (-) // 99.26 // q22.2"]
["11719983_a_at",256.4997,250.11113,248.20724,200.04063,211.93906,192.29243,0.16135979,0.12497187,0.11394787,-0.19730425,-0.11394787,-0.25429535,0.108540565,0.001731551,1.2500123,0.32194227,1.2500123,"up","INPP5A",3632.0,"0007154 // cell communication // non-traceable author statement /// 0046854 // phosphatidylinositol phosphorylation // inferred from electronic annotation","0016020 // membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0004445 // inositol-polyphosphate 5-phosphatase activity // non-traceable author statement /// 0004445 // inositol-polyphosphate 5-phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042731 // PH domain binding // inferred from physical interaction /// 0052658 // inositol-1,4,5-trisphosphate 5-phosphatase activity // inferred from electronic annotation /// 0052659 // inositol-1,3,4,5-tetrakisphosphate 5-phosphatase activity // inferred from electronic annotation","chr10:134351334-134597211 (+) // 89.71 // q26.3"]
["11753289_s_at",6.104063,6.562288,7.554281,5.8590717,6.396551,6.2660913,-0.052660227,0.05176878,0.25486445,-0.11175799,0.014864206,-0.014864206,0.6563613,0.28161347,1.0881748,0.12191035,1.0881748,"up","LOC100506403 /// RUNX1","100506403 /// 861","0001501 // skeletal system development // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0002318 // myeloid progenitor cell differentiation // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007417 // central nervous system development // inferred from electronic annotation /// 0009966 // regulation of signal transduction // inferred from electronic annotation /// 0030097 // hemopoiesis // inferred from direct assay /// 0030097 // hemopoiesis // traceable author statement /// 0030099 // myeloid cell differentiation // inferred from direct assay /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0030853 // negative regulation of granulocyte differentiation // inferred from mutant phenotype /// 0030854 // positive regulation of granulocyte differentiation // inferred from mutant phenotype /// 0030855 // epithelial cell differentiation // inferred from electronic annotation /// 0031069 // hair follicle morphogenesis // inferred from electronic annotation /// 0035162 // embryonic hemopoiesis // inferred from electronic annotation /// 0045766 // positive regulation of angiogenesis // inferred from sequence or structural similarity /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048266 // behavioral response to pain // inferred from electronic annotation /// 0048666 // neuron development // inferred from electronic annotation /// 0048935 // peripheral nervous system neuron development // traceable author statement /// 0060216 // definitive hemopoiesis // inferred from electronic annotation /// 0071336 // regulation of hair follicle cell proliferation // inferred from electronic annotation /// 0071425 // hemopoietic stem cell proliferation // traceable author statement","0005604 // basement membrane // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0000975 // regulatory region DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003714 // transcription corepressor activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // non-traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from direct assay /// 0070491 // repressing transcription factor binding // inferred from electronic annotation","chr21:36206706-36259394 (-) // 69.17 // q22.12"]
["11746755_s_at",14.199144,14.629658,13.873231,14.529036,14.750065,13.802951,-0.016567469,0.026524544,-0.050067425,0.016567469,0.038349867,-0.057394743,0.9127191,0.7482768,-1.0087329,-0.012544238,1.0087329,"down","SLC28A3",64078.0,"0001895 // retina homeostasis // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0015860 // purine nucleoside transport // inferred from electronic annotation /// 0015864 // pyrimidine nucleoside transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0001882 // nucleoside binding // inferred from electronic annotation /// 0005415 // nucleoside:sodium symporter activity // inferred from electronic annotation /// 0015389 // pyrimidine- and adenine-specific:sodium symporter activity // inferred from electronic annotation /// 0015390 // purine-specific nucleoside:sodium symporter activity // inferred from electronic annotation","chr9:86892948-86955672 (-) // 98.76 // q21.32"]
["11746934_a_at",146.86401,157.06474,157.44333,155.82027,152.27386,145.18326,-0.06879473,0.028083801,0.031556606,0.016607285,-0.016607285,-0.08540058,0.84679526,0.59878665,1.0177727,0.025415363,1.0177727,"up","SPIRE1",56907.0,"0006810 // transport // inferred from electronic annotation /// 0048193 // Golgi vesicle transport // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation","chr18:12448630-12453113 (-) // 92.65 // p11.21"]
["11757250_x_at",6.346253,6.2952056,6.910566,6.5139503,6.6949654,6.60603,-0.047753096,-0.05940461,0.07514572,-0.010125399,0.029418468,0.010125399,0.87892985,0.66950047,-1.0142946,-0.020476775,1.0142946,"down","INGX",27160.0,"","","","chrX:70711376-70712604 (-) // 75.0 // q13.1"]
["11753422_a_at",416.53622,433.87915,424.50623,388.92773,387.39026,359.26532,0.049469948,0.10832119,0.0768137,-0.049469948,-0.055184364,-0.16392231,0.23073821,0.014882719,1.1232874,0.16772714,1.1232874,"up","BNIP3L",665.0,"0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from direct assay /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0008634 // negative regulation of survival gene product expression // inferred from direct assay /// 0035694 // mitochondrial protein catabolic process // inferred from mutant phenotype /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0051607 // defense response to virus // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from direct assay /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005740 // mitochondrial envelope // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from mutant phenotype /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031224 // intrinsic to membrane // traceable author statement","0005515 // protein binding // inferred from physical interaction /// 0005521 // lamin binding // inferred from direct assay /// 0005521 // lamin binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from direct assay","chr8:26240606-26268126 (+) // 99.78 // p21.2"]
["11760915_a_at",14.826917,12.883948,10.208222,12.969055,11.375855,13.392843,0.19789481,-0.004749298,-0.34059215,0.004749298,-0.18434858,0.051138163,0.99211407,0.9725328,-1.0043962,-0.0063284757,1.0043962,"down","CYP3A5",1577.0,"0006805 // xenobiotic metabolic process // traceable author statement /// 0008202 // steroid metabolic process // traceable author statement /// 0009822 // alkaloid catabolic process // inferred from direct assay /// 0042737 // drug catabolic process // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0070989 // oxidative demethylation // inferred from direct assay","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005792 // microsome // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0004497 // monooxygenase activity // inferred from sequence or structural similarity /// 0004497 // monooxygenase activity // inferred from electronic annotation /// 0004497 // monooxygenase activity // traceable author statement /// 0005506 // iron ion binding // inferred from electronic annotation /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from direct assay /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016705 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen // inferred from electronic annotation /// 0016712 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen // inferred from electronic annotation /// 0019825 // oxygen binding // traceable author statement /// 0020037 // heme binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070330 // aromatase activity // inferred from electronic annotation","chr7:99270202-99277649 (-) // 39.33 // q22.1"]
["11745703_a_at",34.34698,30.817537,29.679092,32.956432,25.023558,30.230412,0.17030716,0.0138754845,-0.040429115,0.11068392,-0.28658915,-0.0138754845,0.7703701,0.45097324,1.0801098,0.111178026,1.0801098,"up","RCAN3",11123.0,"0009653 // anatomical structure morphogenesis // traceable author statement /// 0019722 // calcium-mediated signaling // inferred from electronic annotation","","0000166 // nucleotide binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0031013 // troponin I binding // inferred from physical interaction","chr1:24840836-24861847 (+) // 100.0 // p36.11"]
["11734841_a_at",381.43503,385.19803,408.36288,378.46707,405.46753,382.6151,-0.009309769,0.0048532486,0.08910465,-0.020579338,0.0788393,-0.0048532486,0.9412612,0.82271504,1.0072445,0.010413881,1.0072445,"up","RAD51",5888.0,"0000724 // double-strand break repair via homologous recombination // inferred from direct assay /// 0000724 // double-strand break repair via homologous recombination // inferred from electronic annotation /// 0000724 // double-strand break repair via homologous recombination // traceable author statement /// 0000730 // DNA recombinase assembly // traceable author statement /// 0006259 // DNA metabolic process // inferred from electronic annotation /// 0006268 // DNA unwinding involved in replication // inferred from direct assay /// 0006281 // DNA repair // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006302 // double-strand break repair // traceable author statement /// 0006310 // DNA recombination // traceable author statement /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006312 // mitotic recombination // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007126 // meiosis // inferred from electronic annotation /// 0007126 // meiosis // inferred from sequence or structural similarity /// 0007131 // reciprocal meiotic recombination // traceable author statement /// 0051106 // positive regulation of DNA ligation // inferred from direct assay /// 0051260 // protein homooligomerization // inferred from physical interaction","0000793 // condensed chromosome // inferred from sequence or structural similarity /// 0000794 // condensed nuclear chromosome // inferred from sequence or structural similarity /// 0000800 // lateral element // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // inferred from electronic annotation /// 0016605 // PML body // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003684 // damaged DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from direct assay /// 0003697 // single-stranded DNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0008094 // DNA-dependent ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0043142 // single-stranded DNA-dependent ATPase activity // inferred from direct assay","chr15:40987357-41024504 (+) // 87.94 // q15.1"]
["11716306_a_at",2260.8755,2258.0317,2228.2517,2320.9014,2255.2095,2269.1929,9.0789795E-4,-9.0789795E-4,-0.020061493,0.038711548,-0.0027122498,0.006205559,0.6055837,0.21932064,-1.0144906,-0.020755503,1.0144906,"down","ATXN10",25814.0,"0007399 // nervous system development // inferred from mutant phenotype /// 0008219 // cell death // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from direct assay","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0030425 // dendrite // inferred from direct assay /// 0043025 // neuronal cell body // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from electronic annotation","chr22:46067682-46241189 (+) // 93.6 // q13.31"]
["11754933_s_at",596.77826,597.3162,603.9555,608.2497,605.5854,583.0405,-0.009273529,-0.007973671,0.007973671,0.018195152,0.011861801,-0.04287243,0.9868822,0.9561174,1.0008187,0.0011806935,1.0008187,"up","TSC22D2",9819.0,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006970 // response to osmotic stress // inferred from electronic annotation","","0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation","chr3:150128994-150177903 (+) // 96.11 // q25.1"]
["11758650_s_at",4208.541,4173.2305,4138.7773,4237.226,4222.2954,4227.0874,-0.0023536682,-0.014509201,-0.02646923,0.0074472427,0.0023536682,0.003991127,0.37440526,0.055590406,-1.013286,-0.019041425,1.013286,"down","SNRPC",6631.0,"0000387 // spliceosomal snRNP assembly // inferred from direct assay /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005685 // U1 snRNP // inferred from direct assay /// 0005685 // U1 snRNP // inferred from electronic annotation /// 0015030 // Cajal body // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003727 // single-stranded RNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0030619 // U1 snRNA binding // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:34741238-34741551 (+) // 100.0 // p21.31"]
["11745820_s_at",1005.3161,1023.0142,1009.7558,1043.4036,997.7476,1046.1329,-0.015767097,0.0094099045,-0.0094099045,0.037880898,-0.026669502,0.04164982,0.72881436,0.38407522,-1.0159829,-0.022876073,1.0159829,"down","PLAGL1",5325.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006917 // induction of apoptosis // traceable author statement /// 0007050 // cell cycle arrest // traceable author statement /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:144261436-144329543 (-) // 94.31 // q24.2"]
["11750538_x_at",4216.9233,4247.695,4284.7544,4336.7695,4278.4087,4295.119,-0.02195263,-0.011463165,0.0010690689,0.018476486,-0.0010690689,0.0045547485,0.47484955,0.10977105,-1.0126271,-0.018103035,1.0126271,"down","TXN",7295.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006662 // glycerol ether metabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006928 // cellular component movement // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0009314 // response to radiation // inferred from direct assay /// 0015949 // nucleobase-containing small molecule interconversion // traceable author statement /// 0022900 // electron transport chain // inferred from electronic annotation /// 0033158 // regulation of protein import into nucleus, translocation // inferred from direct assay /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0043388 // positive regulation of DNA binding // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045454 // cell redox homeostasis // inferred from electronic annotation /// 0046826 // negative regulation of protein export from nucleus // inferred from electronic annotation /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from direct assay","0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0015035 // protein disulfide oxidoreductase activity // inferred from electronic annotation /// 0015037 // peptide disulfide oxidoreductase activity // inferred from electronic annotation","chr9:113006307-113018763 (-) // 90.28 // q31.3"]
["11724469_at",757.28845,744.1205,761.9654,806.1574,772.7964,791.91455,-0.01906395,-0.04437065,-0.010181427,0.071154594,0.010181427,0.045437813,0.30174538,0.030786186,-1.0473884,-0.06679658,1.0473884,"down","SLU7",10569.0,"0000375 // RNA splicing, via transesterification reactions // inferred from direct assay /// 0000380 // alternative nuclear mRNA splicing, via spliceosome // inferred from direct assay /// 0000389 // nuclear mRNA 3'-splice site recognition // inferred from direct assay /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from direct assay /// 0008380 // RNA splicing // inferred from electronic annotation /// 0033554 // cellular response to stress // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005681 // spliceosomal complex // inferred from direct assay /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from direct assay /// 0030532 // small nuclear ribonucleoprotein complex // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay","0000386 // second spliceosomal transesterification activity // inferred from direct assay /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0030628 // pre-mRNA 3'-splice site binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr5:159828653-159846407 (-) // 86.7 // q33.3"]
["11738586_at",10.549765,11.366435,11.09517,10.549765,10.46125,12.439153,-0.036360502,0.07120824,0.036360264,-0.036360502,-0.048516273,0.2013166,0.95815206,0.87124336,-1.0105056,-0.015077256,1.0105056,"down","HGC6.3",1.00128124E8,"","","","chr6:168376603-168377619 (-) // 85.77 // q27"]
["11715422_a_at",1351.8771,1381.9314,1192.3737,1346.3737,1223.4348,1298.5911,0.03195095,0.06367302,-0.1491766,0.026065826,-0.112075806,-0.026065826,0.93804884,0.8138381,1.0136136,0.01950776,1.0136136,"up","BCAP31",10134.0,"0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006921 // cellular component disassembly involved in apoptotic process // traceable author statement /// 0006955 // immune response // non-traceable author statement /// 0006955 // immune response // inferred from electronic annotation /// 0007204 // elevation of cytosolic calcium ion concentration // inferred from mutant phenotype /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0032471 // reduction of endoplasmic reticulum calcium ion concentration // inferred from mutant phenotype /// 0035584 // calcium-mediated signaling using intracellular calcium source // inferred from mutant phenotype /// 0043280 // positive regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from mutant phenotype /// 0051561 // elevation of mitochondrial calcium ion concentration // inferred from mutant phenotype /// 2001244 // positive regulation of intrinsic apoptotic signaling pathway // inferred from mutant phenotype","0000139 // Golgi membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005811 // lipid particle // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0033116 // endoplasmic reticulum-Golgi intermediate compartment membrane // inferred from electronic annotation /// 0071556 // integral to lumenal side of endoplasmic reticulum membrane // traceable author statement","0004872 // receptor activity // inferred from electronic annotation /// 0005102 // receptor binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chrX:152965951-152989802 (-) // 56.42 // q28"]
["11727584_a_at",57.737534,56.71966,62.85301,58.795624,55.561066,60.892437,-0.013100147,-0.038760662,0.10937214,0.01309967,-0.06853485,0.063653946,0.93202794,0.79699296,1.0114541,0.016430859,1.0114541,"up","SPIN3",169981.0,"0007276 // gamete generation // inferred from electronic annotation","","","chrX:57017263-57021987 (-) // 90.02 // p11.21"]
["11759521_a_at",194.88126,205.71233,203.78285,182.4395,195.6018,180.20735,-0.0026621819,0.07537031,0.06177473,-0.097839355,0.0026621819,-0.11559963,0.3826634,0.059024446,1.08304,0.115086526,1.08304,"up","SBNO1",55206.0,"","","","chr12:123778194-123849756 (-) // 96.01 // q24.31"]
["11743383_at",29.798203,29.079939,29.005611,29.270308,30.566467,28.031408,0.030494213,-0.0047068596,-0.00839901,0.0047068596,0.06721878,-0.057686806,0.99370867,0.9793524,1.000728,0.0010499159,1.000728,"up","PRPF40A",55660.0,"0006397 // mRNA processing // inferred from electronic annotation /// 0007010 // cytoskeleton organization // inferred from mutant phenotype /// 0007049 // cell cycle // inferred from electronic annotation /// 0008360 // regulation of cell shape // inferred from mutant phenotype /// 0008380 // RNA splicing // inferred from electronic annotation /// 0016477 // cell migration // inferred from mutant phenotype /// 0032465 // regulation of cytokinesis // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0016363 // nuclear matrix // inferred from direct assay /// 0016363 // nuclear matrix // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr2:153508103-153574511 (-) // 95.18 // q23.3"]
["11746460_a_at",5.511554,5.5348563,5.825981,5.6273103,5.6768355,5.5600586,-0.021313667,-0.015226841,0.058728218,0.008672714,0.021314144,-0.008672714,0.9974707,0.9919578,1.0002018,2.9113726E-4,1.0002018,"up","ZNF711",7552.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chrX:84498996-84527248 (+) // 98.19 // q21.1"]
["11759209_at",6.4755654,7.1689653,6.672639,6.68988,6.8982267,7.144306,-0.0690968,0.07766199,-0.025845528,-0.022122622,0.022122622,0.072690964,0.8432671,0.5911604,-1.0210054,-0.029990485,1.0210054,"down","AKD1",221264.0,"0006139 // nucleobase-containing compound metabolic process // inferred from electronic annotation","","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0019205 // nucleobase-containing compound kinase activity // inferred from electronic annotation","chr6:109870886-110012415 (-) // 89.82 // q21"]
["11760920_x_at",163.6255,171.2073,168.75574,164.20737,171.10141,164.5819,-0.026473522,0.038873196,0.018065453,-0.021352291,0.03798008,-0.018065453,0.8991533,0.71617347,1.0073984,0.0106342975,1.0073984,"up","PHKG2",5261.0,"0005975 // carbohydrate metabolic process // traceable author statement /// 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0005977 // glycogen metabolic process // traceable author statement /// 0005977 // glycogen metabolic process // inferred from electronic annotation /// 0005978 // glycogen biosynthetic process // inferred from electronic annotation /// 0005980 // glycogen catabolic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006091 // generation of precursor metabolites and energy // traceable author statement /// 0006468 // protein phosphorylation // non-traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0045819 // positive regulation of glycogen catabolic process // traceable author statement","0005625 // soluble fraction // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005964 // phosphorylase kinase complex // traceable author statement /// 0005964 // phosphorylase kinase complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // non-traceable author statement /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004689 // phosphorylase kinase activity // traceable author statement /// 0004689 // phosphorylase kinase activity // inferred from electronic annotation /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005524 // ATP binding // non-traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from electronic annotation /// 0050321 // tau-protein kinase activity // traceable author statement /// 0050321 // tau-protein kinase activity // inferred from electronic annotation","chr16:30759590-30771712 (+) // 94.93 // p11.2"]
["11742899_a_at",613.89594,606.62427,608.43066,614.817,610.91003,635.87115,0.0035171509,-0.013673782,-0.009384155,0.005680084,-0.0035171509,0.054257393,0.62889016,0.24617049,-1.0177057,-0.025320394,1.0177057,"down","CGGBP1",8545.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005730 // nucleolus // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // traceable author statement","chr3:88101094-88108218 (-) // 96.05 // p11.1"]
["11762554_at",14.295383,13.221176,10.038679,15.517271,10.933259,10.082815,0.2497623,0.1370635,-0.26021743,0.36808777,-0.1370635,-0.2538886,0.95041037,0.84917724,1.0351388,0.049824294,1.0351388,"up","CPAMD8",27151.0,"0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0004866 // endopeptidase inhibitor activity // inferred from electronic annotation /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation","chr19:17068361-17137625 (-) // 93.17 // p13.11"]
["11717906_s_at",1776.4927,1680.2502,1654.3372,1732.8741,1653.209,1733.1285,0.058110237,-0.022245407,-0.044668198,0.022245407,-0.04565239,0.022457123,0.98502016,0.9491395,-1.0018162,-0.0026177792,1.0018162,"down","STAU1",6780.0,"0008298 // intracellular mRNA localization // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005791 // rough endoplasmic reticulum // inferred from electronic annotation /// 0005791 // rough endoplasmic reticulum // traceable author statement /// 0005875 // microtubule associated complex // traceable author statement /// 0010494 // cytoplasmic stress granule // inferred from sequence or structural similarity /// 0010494 // cytoplasmic stress granule // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0003725 // double-stranded RNA binding // inferred from electronic annotation /// 0003725 // double-stranded RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr20:47729875-47804907 (-) // 95.73 // q13.13"]
["11749926_a_at",11.089975,10.992793,10.820657,11.367756,9.862577,10.31134,0.024083138,0.011384964,-0.011384726,0.0597744,-0.14513636,-0.0809412,0.7137124,0.359687,1.0449705,0.06346223,1.0449705,"up","C4A /// C4B /// LOC100293534","100293534 /// 720 /// 721","0006954 // inflammatory response // inferred from electronic annotation /// 0006956 // complement activation // inferred from electronic annotation /// 0006956 // complement activation // traceable author statement /// 0006958 // complement activation, classical pathway // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // inferred from electronic annotation /// 0030449 // regulation of complement activation // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement","0004866 // endopeptidase inhibitor activity // inferred from electronic annotation","chr6:31949851-31952468 (+) // 97.88 // p21.33 /// chr6:31982589-31985206 (+) // 97.88 // p21.33"]
["11735951_at",71.53859,64.400856,66.87405,71.10158,75.43672,66.617,0.053058147,-0.0985837,-0.044217587,0.044218063,0.12960339,-0.049773216,0.70994854,0.35502458,-1.0506366,-0.07126381,1.0506366,"down","SSTR4",6754.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007187 // G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger // traceable author statement /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0038170 // somatostatin signaling pathway // traceable author statement /// 0038170 // somatostatin signaling pathway // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004994 // somatostatin receptor activity // inferred from electronic annotation /// 0004994 // somatostatin receptor activity // traceable author statement","chr20:23016056-23017314 (+) // 97.54 // p11.21"]
["11728198_at",46.308315,49.36742,43.962788,51.306522,47.24682,47.560925,-0.03372574,0.05856228,-0.1087141,0.11414528,-0.0047798157,0.0047798157,0.70325494,0.34431657,-1.0468158,-0.06600754,1.0468158,"down","ALG1",56052.0,"0006486 // protein glycosylation // traceable author statement /// 0006486 // protein glycosylation // inferred from electronic annotation /// 0006488 // dolichol-linked oligosaccharide biosynthetic process // traceable author statement /// 0009103 // lipopolysaccharide biosynthetic process // traceable author statement /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005783 // endoplasmic reticulum // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000030 // mannosyltransferase activity // traceable author statement /// 0004578 // chitobiosyldiphosphodolichol beta-mannosyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation","chr16:5121809-5137378 (+) // 71.93 // p13.3"]
["11734897_a_at",7.558221,9.603479,8.90767,9.043278,9.410409,8.770081,-0.24790025,0.097610235,-0.0108988285,0.01089859,0.0683105,-0.033356905,0.824644,0.55113167,-1.0489993,-0.06901373,1.0489993,"down","MATN1",4146.0,"0002062 // chondrocyte differentiation // inferred from electronic annotation /// 0003429 // growth plate cartilage chondrocyte morphogenesis // inferred from electronic annotation /// 0006461 // protein complex assembly // traceable author statement /// 0030500 // regulation of bone mineralization // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // traceable author statement","0005201 // extracellular matrix structural constituent // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr1:31184125-31196434 (-) // 92.14 // p35.2"]
["11719916_at",32.432323,33.549053,34.378044,33.702824,33.979477,36.070957,-0.061334133,-0.012494564,0.022720814,-0.005897045,0.005897045,0.09207106,0.6647065,0.2917738,-1.0336347,-0.047726355,1.0336347,"down","IL1B",3553.0,"0000165 // MAPK cascade // inferred from mutant phenotype /// 0000187 // activation of MAPK activity // inferred from direct assay /// 0001660 // fever generation // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from direct assay /// 0001934 // positive regulation of protein phosphorylation // non-traceable author statement /// 0002439 // chronic inflammatory response to antigenic stimulus // inferred from electronic annotation /// 0002711 // positive regulation of T cell mediated immunity // inferred by curator /// 0006915 // apoptotic process // traceable author statement /// 0006916 // anti-apoptosis // inferred from direct assay /// 0006954 // inflammatory response // inferred from direct assay /// 0006954 // inflammatory response // non-traceable author statement /// 0006954 // inflammatory response // inferred from electronic annotation /// 0006955 // immune response // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007204 // elevation of cytosolic calcium ion concentration // inferred from electronic annotation /// 0007267 // cell-cell signaling // traceable author statement /// 0007566 // embryo implantation // traceable author statement /// 0007568 // aging // inferred from electronic annotation /// 0007584 // response to nutrient // inferred from electronic annotation /// 0007611 // learning or memory // inferred from electronic annotation /// 0007613 // memory // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0009408 // response to heat // inferred from electronic annotation /// 0010193 // response to ozone // inferred from electronic annotation /// 0010243 // response to organic nitrogen // inferred from electronic annotation /// 0010332 // response to gamma radiation // inferred from electronic annotation /// 0010575 // positive regulation vascular endothelial growth factor production // inferred from direct assay /// 0010575 // positive regulation vascular endothelial growth factor production // inferred from sequence or structural similarity /// 0010575 // positive regulation vascular endothelial growth factor production // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0010829 // negative regulation of glucose transport // inferred from sequence or structural similarity /// 0010829 // negative regulation of glucose transport // inferred from electronic annotation /// 0014050 // negative regulation of glutamate secretion // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0014805 // smooth muscle adaptation // non-traceable author statement /// 0019221 // cytokine-mediated signaling pathway // inferred from direct assay /// 0019221 // cytokine-mediated signaling pathway // inferred from electronic annotation /// 0030213 // hyaluronan biosynthetic process // inferred from direct assay /// 0030593 // neutrophil chemotaxis // inferred from electronic annotation /// 0030728 // ovulation // inferred from electronic annotation /// 0030730 // sequestering of triglyceride // inferred from direct assay /// 0030949 // positive regulation of vascular endothelial growth factor receptor signaling pathway // inferred by curator /// 0031622 // positive regulation of fever generation // inferred from sequence or structural similarity /// 0031622 // positive regulation of fever generation // inferred from electronic annotation /// 0031663 // lipopolysaccharide-mediated signaling pathway // inferred from direct assay /// 0032308 // positive regulation of prostaglandin secretion // inferred from sequence or structural similarity /// 0032308 // positive regulation of prostaglandin secretion // inferred from electronic annotation /// 0032355 // response to estradiol stimulus // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0032725 // positive regulation of granulocyte macrophage colony-stimulating factor production // inferred from direct assay /// 0032729 // positive regulation of interferon-gamma production // inferred from direct assay /// 0032755 // positive regulation of interleukin-6 production // traceable author statement /// 0032755 // positive regulation of interleukin-6 production // inferred from electronic annotation /// 0032755 // positive regulation of interleukin-6 production // inferred from direct assay /// 0032757 // positive regulation of interleukin-8 production // inferred from direct assay /// 0032874 // positive regulation of stress-activated MAPK cascade // inferred from electronic annotation /// 0033129 // positive regulation of histone phosphorylation // non-traceable author statement /// 0033198 // response to ATP // inferred from electronic annotation /// 0033280 // response to vitamin D // inferred from electronic annotation /// 0033591 // response to L-ascorbic acid // inferred from electronic annotation /// 0034116 // positive regulation of heterotypic cell-cell adhesion // inferred from direct assay /// 0034116 // positive regulation of heterotypic cell-cell adhesion // non-traceable author statement /// 0035066 // positive regulation of histone acetylation // non-traceable author statement /// 0035176 // social behavior // inferred from electronic annotation /// 0035505 // positive regulation of myosin light chain kinase activity // inferred from direct assay /// 0035690 // cellular response to drug // inferred from direct assay /// 0042060 // wound healing // inferred from electronic annotation /// 0042102 // positive regulation of T cell proliferation // inferred from direct assay /// 0042221 // response to chemical stimulus // inferred from electronic annotation /// 0042346 // positive regulation of NF-kappaB import into nucleus // inferred from direct assay /// 0042493 // response to drug // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043122 // regulation of I-kappaB kinase/NF-kappaB cascade // inferred from direct assay /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from electronic annotation /// 0043278 // response to morphine // inferred from electronic annotation /// 0043407 // negative regulation of MAP kinase activity // inferred from sequence or structural similarity /// 0043407 // negative regulation of MAP kinase activity // inferred from electronic annotation /// 0043491 // protein kinase B signaling cascade // inferred from mutant phenotype /// 0043507 // positive regulation of JUN kinase activity // inferred from electronic annotation /// 0045080 // positive regulation of chemokine biosynthetic process // inferred from electronic annotation /// 0045086 // positive regulation of interleukin-2 biosynthetic process // inferred from mutant phenotype /// 0045410 // positive regulation of interleukin-6 biosynthetic process // inferred from electronic annotation /// 0045429 // positive regulation of nitric oxide biosynthetic process // inferred from direct assay /// 0045766 // positive regulation of angiogenesis // inferred from sequence or structural similarity /// 0045766 // positive regulation of angiogenesis // inferred from electronic annotation /// 0045833 // negative regulation of lipid metabolic process // inferred from sequence or structural similarity /// 0045833 // negative regulation of lipid metabolic process // inferred from electronic annotation /// 0045840 // positive regulation of mitosis // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046330 // positive regulation of JNK cascade // inferred from electronic annotation /// 0046627 // negative regulation of insulin receptor signaling pathway // inferred from sequence or structural similarity /// 0046627 // negative regulation of insulin receptor signaling pathway // inferred from electronic annotation /// 0046827 // positive regulation of protein export from nucleus // non-traceable author statement /// 0050796 // regulation of insulin secretion // inferred from direct assay /// 0050900 // leukocyte migration // inferred from electronic annotation /// 0050995 // negative regulation of lipid catabolic process // inferred from direct assay /// 0050996 // positive regulation of lipid catabolic process // inferred from sequence or structural similarity /// 0050996 // positive regulation of lipid catabolic process // inferred from electronic annotation /// 0051044 // positive regulation of membrane protein ectodomain proteolysis // inferred from direct assay /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation /// 0051781 // positive regulation of cell division // inferred from electronic annotation /// 0060355 // positive regulation of cell adhesion molecule production // non-traceable author statement /// 0060559 // positive regulation of calcidiol 1-monooxygenase activity // inferred from direct assay /// 0070164 // negative regulation of adiponectin secretion // inferred from sequence or structural similarity /// 0070164 // negative regulation of adiponectin secretion // inferred from electronic annotation /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from electronic annotation /// 0070487 // monocyte aggregation // inferred from direct assay /// 0071260 // cellular response to mechanical stimulus // inferred from expression pattern /// 0071310 // cellular response to organic substance // inferred from direct assay /// 0071407 // cellular response to organic cyclic compound // inferred from direct assay /// 0071639 // positive regulation of monocyte chemotactic protein-1 production // inferred from direct assay","0005576 // extracellular region // inferred from direct assay /// 0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from mutant phenotype /// 0005615 // extracellular space // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0030141 // secretory granule // inferred from electronic annotation /// 0031982 // vesicle // inferred from electronic annotation","0005125 // cytokine activity // inferred from direct assay /// 0005125 // cytokine activity // inferred from mutant phenotype /// 0005125 // cytokine activity // inferred from electronic annotation /// 0005149 // interleukin-1 receptor binding // non-traceable author statement /// 0005149 // interleukin-1 receptor binding // inferred from electronic annotation /// 0008083 // growth factor activity // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from physical interaction","chr2:113587327-113594358 (-) // 94.91 // q13"]
["11749120_a_at",7.1050544,8.018797,7.7389135,7.743551,6.310519,7.071113,-0.061642647,0.112897396,0.061642885,0.06250739,-0.23272943,-0.068550825,0.67509997,0.30567083,1.0846454,0.11722345,1.0846454,"up","SCUBE2",57758.0,"","0005576 // extracellular region // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr11:9042121-9113093 (-) // 96.33 // p15.4"]
["11736867_x_at",5.562014,6.0381703,5.405597,5.0382476,5.600585,5.5668216,-6.2322617E-4,0.11788082,-0.041776657,-0.14330864,0.009346962,6.2322617E-4,0.7199104,0.3692041,1.0494304,0.069606446,1.0494304,"up","MMP16",4325.0,"0006508 // proteolysis // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0030574 // collagen catabolic process // inferred from electronic annotation /// 0043085 // positive regulation of catalytic activity // traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005796 // Golgi lumen // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from electronic annotation","0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0004222 // metalloendopeptidase activity // traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0008047 // enzyme activator activity // traceable author statement /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008270 // zinc ion binding // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:89049461-89339717 (-) // 98.65 // q21.3"]
["11748194_a_at",13.291723,15.890552,14.4628315,13.291723,13.010912,12.055033,0.0,0.25764108,0.12182188,0.0,-0.030806303,-0.14089274,0.45676315,0.09901488,1.1358093,0.18372063,1.1358093,"up","POLL",27343.0,"0006260 // DNA replication // non-traceable author statement /// 0006260 // DNA replication // inferred from electronic annotation /// 0006281 // DNA repair // inferred from electronic annotation /// 0006289 // nucleotide-excision repair // inferred from direct assay /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0016446 // somatic hypermutation of immunoglobulin genes // non-traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // non-traceable author statement /// 0003824 // catalytic activity // inferred from electronic annotation /// 0003887 // DNA-directed DNA polymerase activity // inferred from electronic annotation /// 0003887 // DNA-directed DNA polymerase activity // non-traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016779 // nucleotidyltransferase activity // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr10:103342749-103347916 (-) // 92.49 // q24.32"]
["11723018_at",352.53397,359.44324,367.91086,372.20737,319.46146,327.85748,-0.014000893,0.014000893,0.047593117,0.06434345,-0.15612125,-0.118694305,0.6618314,0.2888369,1.0614392,0.08602168,1.0614392,"up","LCMT2",9836.0,"0008033 // tRNA processing // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation","","0005515 // protein binding // inferred from physical interaction /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr15:43619973-43622891 (-) // 87.55 // q15.3"]
["11751273_a_at",7.8199053,9.1759205,7.589298,8.530323,7.6299067,9.312824,-0.06272483,0.1679771,-0.10590935,0.06272459,-0.098210335,0.18934298,0.88684034,0.6873649,-1.0363452,-0.051504694,1.0363452,"down","GPR34",2857.0,"0006886 // intracellular protein transport // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0035589 // G-protein coupled purinergic nucleotide receptor signaling pathway // inferred from electronic annotation","0005624 // membrane fraction // inferred from electronic annotation /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0008022 // protein C-terminus binding // inferred from electronic annotation /// 0030165 // PDZ domain binding // inferred from electronic annotation /// 0032403 // protein complex binding // inferred from electronic annotation /// 0045028 // G-protein coupled purinergic nucleotide receptor activity // inferred from electronic annotation","chrX:41548250-41556032 (+) // 90.89 // p11.4"]
["11763524_a_at",31.235342,31.791899,37.562725,39.367508,27.426239,38.02017,-0.14580107,-0.120321274,0.120321274,0.188025,-0.3334236,0.13778448,0.939099,0.8170468,-1.0324432,-0.046062365,1.0324432,"down","PPARA",5465.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006629 // lipid metabolic process // traceable author statement /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // traceable author statement /// 0007507 // heart development // inferred from electronic annotation /// 0008544 // epidermis development // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0010745 // negative regulation of macrophage derived foam cell differentiation // inferred by curator /// 0010745 // negative regulation of macrophage derived foam cell differentiation // inferred from direct assay /// 0010871 // negative regulation of receptor biosynthetic process // inferred from direct assay /// 0010887 // negative regulation of cholesterol storage // inferred from direct assay /// 0010891 // negative regulation of sequestering of triglyceride // inferred from direct assay /// 0015908 // fatty acid transport // traceable author statement /// 0019217 // regulation of fatty acid metabolic process // inferred from electronic annotation /// 0030522 // intracellular receptor mediated signaling pathway // inferred from direct assay /// 0030522 // intracellular receptor mediated signaling pathway // inferred from electronic annotation /// 0032000 // positive regulation of fatty acid beta-oxidation // traceable author statement /// 0032099 // negative regulation of appetite // inferred from sequence or structural similarity /// 0032099 // negative regulation of appetite // inferred from electronic annotation /// 0032868 // response to insulin stimulus // inferred from electronic annotation /// 0042060 // wound healing // inferred from electronic annotation /// 0042157 // lipoprotein metabolic process // inferred from electronic annotation /// 0043401 // steroid hormone mediated signaling pathway // inferred from direct assay /// 0043401 // steroid hormone mediated signaling pathway // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045776 // negative regulation of blood pressure // inferred from electronic annotation /// 0045820 // negative regulation of glycolysis // inferred by curator /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046321 // positive regulation of fatty acid oxidation // inferred from sequence or structural similarity /// 0046321 // positive regulation of fatty acid oxidation // inferred from electronic annotation /// 0072363 // regulation of glycolysis by positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0072366 // regulation of cellular ketone metabolic process by positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0072369 // regulation of lipid transport by positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0001103 // RNA polymerase II repressing transcription factor binding // inferred from physical interaction /// 0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from sequence or structural similarity /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003707 // steroid hormone receptor activity // inferred from direct assay /// 0003707 // steroid hormone receptor activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004879 // ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from direct assay /// 0004879 // ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008144 // drug binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from direct assay /// 0008289 // lipid binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0031624 // ubiquitin conjugating enzyme binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from sequence or structural similarity /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070215 // MDM2 binding // inferred from electronic annotation","chr22:46567042-46611227 (+) // 58.32 // q13.31"]
["11759314_at",21.417528,22.960072,20.836355,18.178871,22.387686,21.97994,-0.018697739,0.08163738,-0.058386803,-0.2552271,0.045215607,0.018697739,0.8320595,0.56663907,1.0462945,0.065288916,1.0462945,"up","CRHR2",1395.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007188 // adenylate cyclase-modulating G-protein coupled receptor signaling pathway // traceable author statement /// 0071376 // cellular response to corticotropin-releasing hormone stimulus // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0015056 // corticotrophin-releasing factor receptor activity // traceable author statement","chr7:30691830-30722314 (-) // 96.93 // p14.3"]
["11746308_a_at",16.873426,15.931742,14.165048,14.889251,15.818763,15.946487,0.087982655,0.005133629,-0.16443491,-0.092499256,-0.0051333904,0.0064680576,0.98170614,0.93851864,1.0045959,0.0066152574,1.0045959,"up","LINC00494",284749.0,"","","","chr20:46993631-46999381 (+) // 68.2 // q13.13"]
["11756679_a_at",199.1486,199.49776,212.53181,189.69267,215.17986,193.75711,-0.0012636185,0.0012636185,0.09256983,-0.07144499,0.110434055,-0.0408597,0.8697014,0.649278,1.0220602,0.03148011,1.0220602,"up","ALDH3A2",224.0,"0006081 // cellular aldehyde metabolic process // inferred from direct assay /// 0006081 // cellular aldehyde metabolic process // non-traceable author statement /// 0006081 // cellular aldehyde metabolic process // inferred from electronic annotation /// 0007417 // central nervous system development // inferred from mutant phenotype /// 0007422 // peripheral nervous system development // inferred from mutant phenotype /// 0008152 // metabolic process // inferred from electronic annotation /// 0008544 // epidermis development // inferred from mutant phenotype /// 0033306 // phytol metabolic process // inferred from mutant phenotype /// 0055114 // oxidation-reduction process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004029 // aldehyde dehydrogenase (NAD) activity // inferred from direct assay /// 0004029 // aldehyde dehydrogenase (NAD) activity // inferred from mutant phenotype /// 0004029 // aldehyde dehydrogenase (NAD) activity // inferred from electronic annotation /// 0004030 // aldehyde dehydrogenase [NAD(P)+] activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016620 // oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor // inferred from electronic annotation","chr17:19559457-19579055 (+) // 89.71 // p11.2"]
["11763695_a_at",98.28646,96.37482,96.37482,108.82576,116.874,100.51238,-0.01615429,-0.044490814,-0.044490814,0.13080168,0.23373508,0.01615429,0.39280275,0.06341224,-1.1187924,-0.16194238,1.1187924,"down","ABTB1",80325.0,"0006412 // translation // inferred from electronic annotation /// 0006414 // translational elongation // inferred from electronic annotation","0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay","0003746 // translation elongation factor activity // inferred from electronic annotation","chr3:127391808-127399766 (+) // 97.99 // q21.3"]
["11741065_a_at",100.36462,101.940544,87.54656,95.27134,90.688675,97.74293,0.056662083,0.079138756,-0.14046669,-0.018475056,-0.08959484,0.018475056,0.9049791,0.7305252,1.0198165,0.02830961,1.0198165,"up","EPHX1",2052.0,"0001889 // liver development // inferred from electronic annotation /// 0006725 // cellular aromatic compound metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009636 // response to toxin // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0019439 // aromatic compound catabolic process // inferred from electronic annotation /// 0071310 // cellular response to organic substance // inferred from electronic annotation /// 0071385 // cellular response to glucocorticoid stimulus // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004301 // epoxide hydrolase activity // inferred from electronic annotation /// 0004301 // epoxide hydrolase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from electronic annotation /// 0033961 // cis-stilbene-oxide hydrolase activity // inferred from electronic annotation","chr1:225997793-226033260 (+) // 98.11 // q42.12"]
["11742427_s_at",25.718504,25.654575,32.65744,33.47713,28.59614,26.881128,-0.108400345,-0.11199093,0.23620462,0.27196884,0.04461336,-0.04461336,0.8465605,0.5973997,-1.0609709,-0.08538509,1.0609709,"down","STRC",161497.0,"0007605 // sensory perception of sound // inferred from electronic annotation /// 0050910 // detection of mechanical stimulus involved in sensory perception of sound // inferred from electronic annotation /// 0060088 // auditory receptor cell stereocilium organization // inferred from electronic annotation /// 0060088 // auditory receptor cell stereocilium organization // inferred from sequence or structural similarity","0009986 // cell surface // inferred from electronic annotation /// 0032426 // stereocilium bundle tip // inferred from electronic annotation /// 0032426 // stereocilium bundle tip // inferred from sequence or structural similarity /// 0060091 // kinocilium // inferred from sequence or structural similarity","","chr15:43891760-43910998 (-) // 98.84 // q15.3 /// chr15:43991576-44010460 (-) // 98.4 // q15.3"]
["11747511_x_at",41.94685,44.966656,47.654438,45.537064,47.0435,44.200302,-0.10938597,-0.009092808,0.07466221,0.009092808,0.056046963,-0.033892155,0.8888502,0.6942874,-1.0174948,-0.025021417,1.0174948,"down","HLA-DQB1",3119.0,"0002381 // immunoglobulin production involved in immunoglobulin mediated immune response // inferred from direct assay /// 0002455 // humoral immune response mediated by circulating immunoglobulin // inferred from direct assay /// 0002504 // antigen processing and presentation of peptide or polysaccharide antigen via MHC class II // inferred from electronic annotation /// 0006955 // immune response // inferred from electronic annotation /// 0006955 // immune response // non-traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0019882 // antigen processing and presentation // inferred from electronic annotation /// 0031295 // T cell costimulation // traceable author statement /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement","0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0042613 // MHC class II protein complex // inferred from electronic annotation","0032395 // MHC class II receptor activity // non-traceable author statement","chr6:32628844-32634472 (-) // 88.93 // p21.32"]
["11736145_a_at",228.39386,227.61374,248.00954,247.67146,242.47302,246.77591,-0.09898901,-0.10392523,0.019882679,0.017914772,-0.012688637,0.012688637,0.56784993,0.18232548,-1.0475231,-0.06698211,1.0475231,"down","SPATA20",64847.0,"0006013 // mannose metabolic process // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004476 // mannose-6-phosphate isomerase activity // inferred from electronic annotation","chr17:48624449-48633211 (+) // 96.91 // q21.33"]
["11716111_x_at",9.887566,9.680634,9.303449,9.401822,10.462986,9.0911255,0.051594257,0.021080494,-0.03625536,-0.021080494,0.13320184,-0.06956196,0.9931564,0.97686404,-1.0014197,-0.002046689,1.0014197,"down","PIGR",5284.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030133 // transport vesicle // inferred from electronic annotation /// 0055038 // recycling endosome membrane // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:207101863-207119811 (-) // 79.88 // q32.1"]
["11741641_a_at",69.95191,73.39534,65.95908,67.833824,69.93365,76.14234,1.8835068E-4,0.069512844,-0.08460426,-0.04417038,-1.8882751E-4,0.122523785,0.8780176,0.6668988,-1.021736,-0.031022511,1.021736,"down","ZFX",7543.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0003713 // transcription coactivator activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chrX:24167152-24232628 (+) // 91.12 // p22.11"]
["11752497_a_at",248.46178,233.43408,248.15073,222.76097,245.87634,242.93869,0.023760796,-0.06624699,0.021953583,-0.13376617,0.00867033,-0.00867033,0.80962247,0.52170086,1.0265077,0.0377445,1.0265077,"up","MEF2D",4209.0,"0001649 // osteoblast differentiation // inferred from electronic annotation /// 0001958 // endochondral ossification // inferred from electronic annotation /// 0002062 // chondrocyte differentiation // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // inferred from direct assay /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007512 // adult heart development // inferred from expression pattern /// 0007517 // muscle organ development // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0000977 // RNA polymerase II regulatory region sequence-specific DNA binding // inferred from direct assay /// 0000981 // sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from electronic annotation /// 0033613 // activating transcription factor binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0042826 // histone deacetylase binding // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation","chr1:156436007-156470545 (-) // 92.49 // q22"]
["11742429_x_at",6.98332,5.9825654,6.396551,6.1363626,7.273764,6.1698284,0.15265083,-0.07049799,0.026031971,-0.033878565,0.21143985,-0.026031971,0.96583825,0.8954462,-1.0100651,-0.014448249,1.0100651,"down","ZNF716",441234.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:57509882-57533265 (+) // 73.13 // p11.2"]
["11746471_s_at",246.91852,256.22263,241.85616,257.81644,245.4306,258.049,-0.026681423,0.026681423,-0.056567192,0.035627842,-0.035401344,0.036928654,0.7470517,0.41161686,-1.0218906,-0.031240812,1.0218906,"down","MAP4K4",9448.0,"0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006950 // response to stress // inferred from direct assay /// 0007243 // intracellular protein kinase cascade // inferred from direct assay /// 0016310 // phosphorylation // inferred from electronic annotation /// 0046328 // regulation of JNK cascade // inferred from direct assay","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005083 // small GTPase regulator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr2:102413695-102508449 (+) // 95.66 // q11.2"]
["11721410_s_at",27.985344,25.392244,31.35482,27.447132,25.179632,29.105738,0.014008045,-0.12627554,0.17802382,-0.014008045,-0.13840628,0.07064009,0.8788316,0.6692607,1.0346744,0.04917685,1.0346744,"up","STK16",8576.0,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005798 // Golgi-associated vesicle // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004715 // non-membrane spanning protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr2:220110200-220115174 (+) // 99.32 // q35"]
["11729078_a_at",6.276894,6.197666,6.5939918,6.187503,6.1935153,6.094144,0.01880908,4.8327446E-4,0.08991027,-0.0018844604,-4.8327446E-4,-0.023818254,0.5720314,0.18601008,1.0317758,0.04512956,1.0317758,"up","SLC26A7",115111.0,"0001696 // gastric acid secretion // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006811 // ion transport // inferred from electronic annotation /// 0006820 // anion transport // inferred from electronic annotation /// 0006821 // chloride transport // inferred from direct assay /// 0006821 // chloride transport // inferred from electronic annotation /// 0008272 // sulfate transport // inferred from direct assay /// 0008272 // sulfate transport // inferred from electronic annotation /// 0015701 // bicarbonate transport // inferred from sequence or structural similarity /// 0015701 // bicarbonate transport // inferred from electronic annotation /// 0019532 // oxalate transport // inferred from direct assay /// 0055085 // transmembrane transport // traceable author statement","0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from mutant phenotype /// 0016323 // basolateral plasma membrane // inferred from sequence or structural similarity /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0055038 // recycling endosome membrane // inferred from electronic annotation","0005253 // anion channel activity // inferred from electronic annotation /// 0005254 // chloride channel activity // inferred from direct assay /// 0005254 // chloride channel activity // inferred from electronic annotation /// 0015106 // bicarbonate transmembrane transporter activity // inferred from sequence or structural similarity /// 0015106 // bicarbonate transmembrane transporter activity // inferred from electronic annotation /// 0015116 // sulfate transmembrane transporter activity // inferred from direct assay /// 0015116 // sulfate transmembrane transporter activity // inferred from electronic annotation /// 0015301 // anion:anion antiporter activity // inferred from electronic annotation /// 0019531 // oxalate transmembrane transporter activity // inferred from direct assay","chr8:92261515-92410383 (+) // 98.58 // q21.3"]
["11726480_at",63.11539,57.02184,62.35166,71.17261,65.97513,59.063477,0.00878191,-0.13769579,-0.008782387,0.18211222,0.072711945,-0.08694363,0.68897057,0.3244929,-1.0731554,-0.101859,1.0731554,"down","FATE1",89885.0,"","0005783 // endoplasmic reticulum // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chrX:150884507-150891666 (+) // 92.97 // q28"]
["11731581_a_at",95.26831,106.43132,107.75562,104.304085,109.54072,97.0123,-0.14529085,0.0145635605,0.032403946,-0.014563084,0.056107998,-0.119119644,0.9790735,0.9319015,-1.0048054,-0.006916188,1.0048054,"down","WASF1",8936.0,"0006461 // protein complex assembly // non-traceable author statement /// 0006928 // cellular component movement // traceable author statement /// 0030041 // actin filament polymerization // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005856 // cytoskeleton // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement /// 0030027 // lamellipodium // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation","chr6:110421021-110501207 (-) // 99.66 // q21"]
["11716458_a_at",1109.6827,1083.7574,1148.2091,1149.1765,1113.4242,1104.6073,-0.0024280548,-0.036533356,0.04681015,0.04802513,0.0024280548,-0.009041786,0.9030458,0.72653824,-1.0077847,-0.011187494,1.0077847,"down","MRPS35",60488.0,"0042769 // DNA damage response, detection of DNA damage // non-traceable author statement /// 0043043 // peptide biosynthetic process // inferred by curator","0005739 // mitochondrion // inferred from electronic annotation /// 0005763 // mitochondrial small ribosomal subunit // inferred from sequence or structural similarity /// 0005763 // mitochondrial small ribosomal subunit // non-traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","","chr12:27863715-27909228 (+) // 86.29 // p11.22"]
["11757069_s_at",830.1638,796.36456,857.0047,813.087,813.5961,831.6419,0.014541626,-0.045425415,0.060448647,-0.015444756,-0.014541626,0.017107964,0.88592196,0.6855054,1.0098547,0.014147693,1.0098547,"up","LOC100506562",1.00506562E8,"","","","chr2:222808882-222809530 (+) // 96.23 // q36.1 /// chr22:42072546-42073161 (-) // 90.95 // q13.2"]
["11731421_a_at",206.78886,209.04065,210.88004,213.37402,200.17563,207.8617,-0.011545181,0.0040798187,0.016718388,0.033680916,-0.058437347,-0.0040798187,0.8806935,0.67328256,1.0088394,0.012696481,1.0088394,"up","UBE2G2",7327.0,"0006511 // ubiquitin-dependent protein catabolic process // traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0030433 // ER-associated protein catabolic process // inferred from electronic annotation /// 0070936 // protein K48-linked ubiquitination // inferred from direct assay","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation","chr21:46188494-46222170 (-) // 81.22 // q22.3"]
["11731066_x_at",10.71615,10.247429,8.669768,10.657551,9.835204,9.379624,0.0941422,0.029617548,-0.21157932,0.08623147,-0.029617548,-0.09804249,0.9649753,0.89253867,-1.0107763,-0.015463715,1.0107763,"down","GIMAP1",170575.0,"0030183 // B cell differentiation // inferred from electronic annotation /// 0030217 // T cell differentiation // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation","chr7:150413644-150418881 (+) // 86.42 // q36.1"]
["11738896_a_at",7.8923736,8.209541,9.401824,8.665804,7.264166,7.9662447,-0.035141468,0.021701097,0.21733975,0.099732876,-0.15480351,-0.02170086,0.75795496,0.42756426,1.0669976,0.09355699,1.0669976,"up","CD200R1L",344807.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation","chr3:112538618-112564797 (-) // 79.4 // q13.2"]
["11729057_at",10.420547,11.144274,10.855985,11.736578,11.366435,12.3534,-0.11111021,-0.014238596,-0.05205059,0.06047082,0.014238596,0.13436675,0.3500135,0.045584306,-1.093403,-0.12882522,1.093403,"down","C19orf69",1.00170765E8,"","","","chr19:41949062-41950673 (+) // 70.1 // q13.2"]
["11754026_a_at",68.74256,65.07498,79.04063,70.44667,83.573685,68.354706,-0.017663956,-0.09676504,0.18372726,0.017663956,0.26418114,-0.025826931,0.8647682,0.63942134,-1.0440856,-0.062240027,1.0440856,"down","IL8",3576.0,"0001525 // angiogenesis // traceable author statement /// 0002237 // response to molecule of bacterial origin // inferred from direct assay /// 0006928 // cellular component movement // traceable author statement /// 0006935 // chemotaxis // inferred from electronic annotation /// 0006954 // inflammatory response // traceable author statement /// 0006954 // inflammatory response // inferred from electronic annotation /// 0006955 // immune response // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0007050 // cell cycle arrest // inferred from direct assay /// 0007165 // signal transduction // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0019722 // calcium-mediated signaling // traceable author statement /// 0030155 // regulation of cell adhesion // inferred from direct assay /// 0030593 // neutrophil chemotaxis // inferred from genetic interaction /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0031623 // receptor internalization // inferred from direct assay /// 0035556 // intracellular signal transduction // inferred from direct assay /// 0042119 // neutrophil activation // traceable author statement /// 0044344 // cellular response to fibroblast growth factor stimulus // inferred from expression pattern /// 0045091 // regulation of retroviral genome replication // inferred from direct assay /// 0045744 // negative regulation of G-protein coupled receptor protein signaling pathway // inferred from direct assay /// 0048566 // embryonic digestive tract development // inferred from expression pattern /// 0050930 // induction of positive chemotaxis // inferred from genetic interaction /// 0071222 // cellular response to lipopolysaccharide // inferred from direct assay /// 0071347 // cellular response to interleukin-1 // inferred from expression pattern /// 0071356 // cellular response to tumor necrosis factor // inferred from expression pattern /// 0090023 // positive regulation of neutrophil chemotaxis // traceable author statement","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0005622 // intracellular // inferred from direct assay","0005125 // cytokine activity // inferred from electronic annotation /// 0005153 // interleukin-8 receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008009 // chemokine activity // inferred from electronic annotation /// 0008009 // chemokine activity // traceable author statement","chr4:74606280-74608177 (+) // 70.26 // q13.3"]
["11745068_a_at",12.313524,10.721844,9.365535,8.834418,9.958918,12.5615225,0.2529366,0.05324626,-0.1418736,-0.22609997,-0.05324626,0.28170443,0.92861944,0.7878682,1.0381275,0.0539837,1.0381275,"up","ZNF833P",401898.0,"","0005622 // intracellular // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:11750590-11797382 (+) // 70.58 // p13.2"]
["11743790_a_at",66.519485,63.459084,67.7277,66.334404,54.874237,64.26008,0.026936531,-0.041013718,0.05290556,0.02291727,-0.25071144,-0.022917747,0.6998588,0.3397634,1.0691864,0.09651346,1.0691864,"up","FRS2",10818.0,"0000186 // activation of MAPKK activity // traceable author statement /// 0000187 // activation of MAPK activity // inferred from electronic annotation /// 0001702 // gastrulation with mouth forming second // inferred from electronic annotation /// 0001759 // organ induction // inferred from electronic annotation /// 0003281 // ventricular septum development // inferred from electronic annotation /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0007185 // transmembrane receptor protein tyrosine phosphatase signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007405 // neuroblast proliferation // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from genetic interaction /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from electronic annotation /// 0008595 // anterior/posterior axis specification, embryo // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation /// 0046619 // optic placode formation involved in camera-type eye formation // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0050678 // regulation of epithelial cell proliferation // inferred from electronic annotation /// 0060527 // prostate epithelial cord arborization involved in prostate glandular acinus morphogenesis // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005068 // transmembrane receptor protein tyrosine kinase adaptor activity // traceable author statement /// 0005068 // transmembrane receptor protein tyrosine kinase adaptor activity // inferred from electronic annotation /// 0005104 // fibroblast growth factor receptor binding // inferred from physical interaction /// 0005158 // insulin receptor binding // inferred from electronic annotation /// 0005168 // neurotrophin TRKA receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0019211 // phosphatase activator activity // traceable author statement","chr12:69864128-69973573 (+) // 98.22 // q15"]
["11720383_a_at",212.784,221.17673,233.01242,214.55333,233.39943,221.14603,-0.05570984,1.001358E-4,0.07530737,-0.04376316,0.07770157,-1.001358E-4,0.9790735,0.93211687,-1.0032725,-0.004713559,1.0032725,"down","STX6",10228.0,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006906 // vesicle fusion // inferred from physical interaction /// 0007032 // endosome organization // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0042147 // retrograde transport, endosome to Golgi // inferred from mutant phenotype /// 0048193 // Golgi vesicle transport // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030136 // clathrin-coated vesicle // traceable author statement /// 0032588 // trans-Golgi network membrane // inferred from sequence or structural similarity /// 0032588 // trans-Golgi network membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0005484 // SNAP receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr1:180941851-180992257 (-) // 97.46 // q25.3"]
["11753303_a_at",76.71011,89.66808,91.40841,80.86558,85.093124,76.574234,-0.112867355,0.11230993,0.14004278,-0.036758423,0.036757946,-0.11542511,0.74257237,0.4049165,1.060666,0.08497038,1.060666,"up","TMEM63A",9725.0,"","0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation","chr1:226048423-226054434 (-) // 97.25 // q42.12"]
["11747954_x_at",140.31305,134.39497,146.37402,151.54904,140.45894,155.1084,-0.031255245,-0.0934248,0.029755592,0.079880714,-0.029755592,0.1133728,0.5849023,0.19862694,-1.0615268,-0.08614076,1.0615268,"down","PYROXD1",79912.0,"0055114 // oxidation-reduction process // inferred from electronic annotation","","0016491 // oxidoreductase activity // inferred from electronic annotation","chr12:21590528-21621704 (+) // 95.89 // p12.1 /// chr11:106697101-106698748 (-) // 97.22 // q22.3"]
["11746234_a_at",182.67192,173.04527,191.85611,160.50975,153.679,173.10246,0.07786703,-2.3794174E-4,0.14863682,-0.10872698,-0.17146826,2.3794174E-4,0.39240402,0.06302933,1.1240772,0.16874112,1.1240772,"up","ZFP106",64397.0,"0008286 // insulin receptor signaling pathway // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation","0001515 // opioid peptide activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr15:42707320-42783397 (-) // 75.26 // q15.1"]
["11745038_s_at",20.10253,21.577475,21.45425,21.609756,18.581034,24.111612,-0.09801769,0.004131317,-0.004131317,0.0062880516,-0.21156406,0.16433334,0.9593091,0.87532604,-1.0132744,-0.01902496,1.0132744,"down","FRAT1",10023.0,"0016055 // Wnt receptor signaling pathway // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","","chr10:99079021-99081580 (+) // 93.94 // q24.1"]
["11720283_at",75.54069,77.63129,74.5629,75.476845,72.87527,87.87401,6.098747E-4,0.03999424,-0.018186092,-6.098747E-4,-0.051214695,0.21879244,0.8473629,0.59953386,-1.0339621,-0.048183348,1.0339621,"down","JMY",133746.0,"0006281 // DNA repair // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from sequence or structural similarity /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from sequence or structural similarity /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0034314 // Arp2/3 complex-mediated actin nucleation // inferred from sequence or structural similarity /// 0034314 // Arp2/3 complex-mediated actin nucleation // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from sequence or structural similarity /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from sequence or structural similarity /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0070060 // 'de novo' actin filament nucleation // inferred from sequence or structural similarity /// 0070060 // 'de novo' actin filament nucleation // inferred from electronic annotation /// 0070358 // actin polymerization-dependent cell motility // inferred from sequence or structural similarity /// 0070358 // actin polymerization-dependent cell motility // inferred from electronic annotation","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0031252 // cell leading edge // inferred from direct assay","0003713 // transcription coactivator activity // inferred from sequence or structural similarity /// 0003713 // transcription coactivator activity // inferred from electronic annotation /// 0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr5:78531924-78623038 (+) // 95.08 // q14.1"]
["11758234_s_at",668.0649,668.2075,655.2548,631.5702,635.3186,647.7441,0.036248207,0.036556244,0.00831604,-0.044796944,-0.03625965,-0.00831604,0.24323496,0.017090378,1.0401784,0.05683101,1.0401784,"up","MED21",9412.0,"0001824 // blastocyst development // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0016592 // mediator complex // inferred from direct assay /// 0016592 // mediator complex // inferred from electronic annotation","0003713 // transcription coactivator activity // inferred from direct assay /// 0003899 // DNA-directed RNA polymerase activity // traceable author statement","chr12:27182182-27182678 (+) // 83.08 // p11.23"]
["11725189_x_at",86.29167,86.345055,106.47424,78.818855,79.82412,82.020035,0.036623,0.037515163,0.33983374,-0.09405756,-0.075773716,-0.036622524,0.4813777,0.113378845,1.1541322,0.20680854,1.1541322,"up","GPR126",57211.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007218 // neuropeptide signaling pathway // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement","chr6:142623055-142767401 (+) // 99.03 // q24.1"]
["11722974_a_at",334.00793,349.87784,357.3454,318.3366,309.68674,322.2158,0.025927544,0.09289646,0.12336445,-0.04340172,-0.08314514,-0.025927544,0.2426667,0.016957652,1.0954733,0.1315543,1.0954733,"up","WDR90",197335.0,"","","","chr16:699362-717830 (+) // 98.43 // p13.3"]
["11724200_a_at",10.776927,11.168535,10.900675,10.964669,10.427458,13.675977,-0.02069354,0.030800343,-0.0042221546,0.004222393,-0.06825209,0.32300448,0.8111736,0.52448714,-1.0602198,-0.08436334,1.0602198,"down","PYGM",5837.0,"0001666 // response to hypoxia // inferred from electronic annotation /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0005977 // glycogen metabolic process // traceable author statement /// 0005977 // glycogen metabolic process // inferred from electronic annotation /// 0005980 // glycogen catabolic process // traceable author statement /// 0005980 // glycogen catabolic process // inferred from electronic annotation /// 0006006 // glucose metabolic process // traceable author statement /// 0006874 // cellular calcium ion homeostasis // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0051591 // response to cAMP // inferred from electronic annotation","0005625 // soluble fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016529 // sarcoplasmic reticulum // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004645 // phosphorylase activity // inferred from electronic annotation /// 0008144 // drug binding // inferred from electronic annotation /// 0008184 // glycogen phosphorylase activity // inferred from electronic annotation /// 0008184 // glycogen phosphorylase activity // traceable author statement /// 0016208 // AMP binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation","chr11:64513861-64528187 (-) // 98.03 // q13.1"]
["11751085_a_at",354.70743,355.8888,355.04053,409.2709,422.32,417.70728,-0.1056118,-0.10081482,-0.10425758,0.10081482,0.14609528,0.13025093,0.045525856,6.7285146E-5,-1.1722512,-0.22928178,1.1722512,"down","GBA",2629.0,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006665 // sphingolipid metabolic process // traceable author statement /// 0006665 // sphingolipid metabolic process // inferred from electronic annotation /// 0006680 // glucosylceramide catabolic process // inferred from mutant phenotype /// 0006687 // glycosphingolipid metabolic process // traceable author statement /// 0007040 // lysosome organization // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0023021 // termination of signal transduction // inferred from mutant phenotype /// 0032715 // negative regulation of interleukin-6 production // inferred from direct assay /// 0035307 // positive regulation of protein dephosphorylation // inferred from mutant phenotype /// 0043407 // negative regulation of MAP kinase activity // inferred from mutant phenotype /// 0044281 // small molecule metabolic process // traceable author statement /// 0046512 // sphingosine biosynthetic process // inferred from mutant phenotype /// 0046513 // ceramide biosynthetic process // inferred from mutant phenotype /// 0050728 // negative regulation of inflammatory response // inferred by curator /// 0071356 // cellular response to tumor necrosis factor // inferred from mutant phenotype","0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from sequence or structural similarity /// 0005765 // lysosomal membrane // traceable author statement /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0043202 // lysosomal lumen // inferred from sequence or structural similarity /// 0043202 // lysosomal lumen // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004348 // glucosylceramidase activity // inferred from direct assay /// 0004348 // glucosylceramidase activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from sequence or structural similarity /// 0005102 // receptor binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity, acting on glycosyl bonds // inferred from electronic annotation /// 0043169 // cation binding // inferred from electronic annotation","chr1:155204519-155211017 (-) // 99.88 // q22"]
["11723154_s_at",12.44862,12.937526,16.817928,14.894958,15.278751,13.23087,-0.17338014,-0.11780429,0.26063395,0.0854578,0.12216067,-0.08545804,0.91436595,0.7523803,-1.0359136,-0.050903663,1.0359136,"down","CAMTA1",23261.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation","chr1:6845383-7829764 (+) // 97.28 // p36.31"]
["11763795_a_at",6.9655056,7.258658,7.0044274,7.800313,6.9450393,7.007162,-0.00832057,0.051154137,-2.8157234E-4,0.15498352,-0.012565851,2.8157234E-4,0.84229565,0.5893608,-1.0234087,-0.033382334,1.0234087,"down","PICK1",9463.0,"0006200 // ATP catabolic process // inferred from sequence or structural similarity /// 0006468 // protein phosphorylation // inferred from sequence or structural similarity /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006605 // protein targeting // inferred from electronic annotation /// 0006890 // retrograde vesicle-mediated transport, Golgi to ER // non-traceable author statement /// 0007205 // protein kinase C-activating G-protein coupled receptor signaling pathway // inferred from direct assay /// 0007268 // synaptic transmission // traceable author statement /// 0015844 // monoamine transport // inferred from direct assay /// 0016310 // phosphorylation // inferred from electronic annotation /// 0043045 // DNA methylation involved in embryo development // non-traceable author statement /// 0043046 // DNA methylation involved in gamete generation // traceable author statement /// 0043113 // receptor clustering // inferred from sequence or structural similarity /// 0043113 // receptor clustering // inferred from electronic annotation /// 0045161 // neuronal ion channel clustering // traceable author statement","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0030666 // endocytic vesicle membrane // traceable author statement /// 0042734 // presynaptic membrane // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation /// 0045202 // synapse // inferred from sequence or structural similarity /// 0045202 // synapse // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005080 // protein kinase C binding // inferred from sequence or structural similarity /// 0005080 // protein kinase C binding // inferred from electronic annotation /// 0005102 // receptor binding // inferred from sequence or structural similarity /// 0005102 // receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from sequence or structural similarity /// 0019899 // enzyme binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr22:38453401-38470948 (+) // 96.2 // q13.1"]
["11727667_at",9.758859,9.541458,9.868338,9.020927,7.6626573,8.703361,0.07296944,0.040466785,0.08906436,-0.040467024,-0.27589798,-0.09217024,0.3581841,0.04902216,1.1516311,0.20367867,1.1516311,"up","DNAH7",56171.0,"0001539 // ciliary or flagellar motility // non-traceable author statement /// 0007018 // microtubule-based movement // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005858 // axonemal dynein complex // non-traceable author statement /// 0005874 // microtubule // inferred from electronic annotation /// 0005929 // cilium // inferred from direct assay /// 0005929 // cilium // inferred from electronic annotation /// 0030286 // dynein complex // inferred from electronic annotation /// 0035085 // cilium axoneme // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003774 // motor activity // inferred from electronic annotation /// 0003777 // microtubule motor activity // non-traceable author statement /// 0003777 // microtubule motor activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation","chr2:196602432-196933554 (-) // 99.13 // q32.3"]
["11721026_a_at",117.23422,117.52387,126.21747,122.98828,126.207375,114.62784,-0.036343575,-0.03278351,0.07017422,0.03278351,0.07005882,-0.068779945,0.95041037,0.84909695,-1.0076573,-0.011005052,1.0076573,"down","OCEL1",79629.0,"","","","chr19:17337012-17340028 (+) // 82.65 // p13.11"]
["11754586_x_at",650.9441,660.88245,681.18256,641.09576,636.14777,624.9594,0.010996819,0.03285694,0.07650471,-0.010996819,-0.022174835,-0.047774315,0.3288901,0.03864583,1.0476098,0.06710147,1.0476098,"up","WDR82",80335.0,"0051568 // histone H3-K4 methylation // inferred from direct assay","0000785 // chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0035097 // histone methyltransferase complex // inferred from direct assay /// 0048188 // Set1C/COMPASS complex // inferred from direct assay /// 0072357 // PTW/PP1 phosphatase complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0042800 // histone methyltransferase activity (H3-K4 specific) // inferred from direct assay","chr3:52288282-52302154 (-) // 88.78 // p21.2"]
["11755263_s_at",6.4127026,6.1696773,6.007657,6.005794,6.461118,7.4653254,0.027868748,-0.027868748,-0.06626129,-0.0667088,0.03872013,0.24714112,0.72506845,0.3785608,-1.0681676,-0.09513798,1.0681676,"down","HSPC072",29075.0,"","","","chr20:18768847-18774634 (-) // 31.16 // p11.23"]
["11756769_a_at",7.1643534,7.168643,7.118014,7.7910295,8.178077,8.3414345,-0.060920477,-0.060056925,-0.07028222,0.060056925,0.13000464,0.15853834,0.13839294,0.0036254777,-1.1328471,-0.17995311,1.1328471,"down","IL12A",3592.0,"0001916 // positive regulation of T cell mediated cytotoxicity // inferred from direct assay /// 0002860 // positive regulation of natural killer cell mediated cytotoxicity directed against tumor cell target // inferred from direct assay /// 0006955 // immune response // traceable author statement /// 0006955 // immune response // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from direct assay /// 0009615 // response to virus // inferred from expression pattern /// 0010224 // response to UV-B // inferred from direct assay /// 0016477 // cell migration // inferred from direct assay /// 0032496 // response to lipopolysaccharide // inferred from direct assay /// 0032700 // negative regulation of interleukin-17 production // inferred from direct assay /// 0032729 // positive regulation of interferon-gamma production // inferred from direct assay /// 0032729 // positive regulation of interferon-gamma production // inferred from electronic annotation /// 0032816 // positive regulation of natural killer cell activation // inferred from direct assay /// 0034393 // positive regulation of smooth muscle cell apoptotic process // inferred from direct assay /// 0042102 // positive regulation of T cell proliferation // inferred from electronic annotation /// 0042520 // positive regulation of tyrosine phosphorylation of Stat4 protein // inferred from direct assay /// 0042832 // defense response to protozoan // inferred from electronic annotation /// 0045785 // positive regulation of cell adhesion // inferred from direct assay /// 0045954 // positive regulation of natural killer cell mediated cytotoxicity // inferred from direct assay /// 0048662 // negative regulation of smooth muscle cell proliferation // inferred from direct assay /// 0050671 // positive regulation of lymphocyte proliferation // inferred from direct assay /// 0050830 // defense response to Gram-positive bacterium // inferred from expression pattern /// 0051135 // positive regulation of NK T cell activation // inferred from direct assay","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0043514 // interleukin-12 complex // inferred from direct assay /// 0043514 // interleukin-12 complex // non-traceable author statement /// 0043514 // interleukin-12 complex // inferred from electronic annotation","0005125 // cytokine activity // inferred from direct assay /// 0005125 // cytokine activity // traceable author statement /// 0005125 // cytokine activity // inferred from electronic annotation /// 0005143 // interleukin-12 receptor binding // non-traceable author statement /// 0005143 // interleukin-12 receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // inferred from direct assay /// 0008083 // growth factor activity // non-traceable author statement /// 0008083 // growth factor activity // inferred from electronic annotation /// 0042163 // interleukin-12 beta subunit binding // inferred from electronic annotation /// 0045513 // interleukin-27 binding // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from physical interaction","chr3:159706647-159713805 (+) // 86.87 // q25.33"]
["11760162_at",36.254654,32.40056,36.896824,41.070324,45.03028,38.56935,-0.057309628,-0.21945715,-0.031979084,0.12262058,0.25541973,0.031979084,0.36572728,0.05202886,-1.1806558,-0.23958847,1.1806558,"down","WSB1",26118.0,"0016310 // phosphorylation // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from direct assay /// 0005622 // intracellular // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0016301 // kinase activity // inferred from electronic annotation","chr17:25629460-25639895 (+) // 91.82 // q11.1"]
["11732201_a_at",148.70413,137.60556,142.09538,139.1095,136.93684,139.34401,0.09500933,-0.016897202,0.029423714,-0.0012149811,-0.023925304,0.0012154579,0.6389835,0.26019162,1.0308398,0.043820146,1.0308398,"up","TMEM39A",55254.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr3:119149700-119182529 (-) // 95.13 // q13.33"]
["11721905_a_at",962.2849,929.7947,980.80035,917.5569,927.1169,950.17834,0.033908844,-0.01564312,0.06140423,-0.034757614,-0.019804,0.01564312,0.6048411,0.21768476,1.0277786,0.039529555,1.0277786,"up","PSMA4",5685.0,"0000075 // cell cycle checkpoint // traceable author statement /// 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000084 // S phase of mitotic cell cycle // traceable author statement /// 0000209 // protein polyubiquitination // traceable author statement /// 0000216 // M/G1 transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051603 // proteolysis involved in cellular protein catabolic process // inferred from electronic annotation","0000502 // proteasome complex // traceable author statement /// 0000502 // proteasome complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005839 // proteasome core complex // inferred from electronic annotation /// 0019773 // proteasome core complex, alpha-subunit complex // inferred from electronic annotation","0004175 // endopeptidase activity // inferred from electronic annotation /// 0004298 // threonine-type endopeptidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr15:78832746-78841546 (+) // 95.14 // q25.1"]
["11760676_at",49.96874,48.917038,56.231377,48.254475,44.550106,44.23513,0.040525913,0.009837151,0.21087503,-0.009837151,-0.12507105,-0.13530731,0.41765395,0.07576992,1.1306491,0.17715123,1.1306491,"up","NUPL2",11097.0,"0005975 // carbohydrate metabolic process // traceable author statement /// 0006611 // protein export from nucleus // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0008645 // hexose transport // traceable author statement /// 0010827 // regulation of glucose transport // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0015758 // glucose transport // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051028 // mRNA transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005643 // nuclear pore // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0005049 // nuclear export signal receptor activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:23221656-23228075 (+) // 78.52 // p15.3"]
["11748734_s_at",50.74637,58.738693,57.436195,52.8364,55.138695,52.659336,-0.088994026,0.122012615,0.089662075,-0.030766487,0.030766964,-0.035609245,0.7916593,0.48709604,1.0372497,0.052763216,1.0372497,"up","TBC1D25",4943.0,"0016242 // negative regulation of macroautophagy // inferred from mutant phenotype /// 0032313 // regulation of Rab GTPase activity // inferred from electronic annotation /// 0032851 // positive regulation of Rab GTPase activity // inferred from electronic annotation /// 0032851 // positive regulation of Rab GTPase activity // inferred from direct assay /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005776 // autophagic vacuole // inferred from direct assay","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005097 // Rab GTPase activator activity // inferred from electronic annotation /// 0005097 // Rab GTPase activator activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008483 // transaminase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chrX:48398116-48419744 (+) // 99.85 // p11.23"]
["11762793_at",16.330631,15.269811,15.769611,14.5268,15.311464,16.279047,0.07170081,-0.025197506,0.021267414,-0.09716296,-0.021267414,0.067136526,0.8037064,0.5112377,1.0278916,0.039688177,1.0278916,"up","YWHAE",7531.0,"0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0001764 // neuron migration // inferred from electronic annotation /// 0006605 // protein targeting // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0021766 // hippocampus development // inferred from electronic annotation /// 0021987 // cerebral cortex development // inferred from electronic annotation /// 0035308 // negative regulation of protein dephosphorylation // inferred from electronic annotation /// 0035329 // hippo signaling cascade // traceable author statement /// 0035556 // intracellular signal transduction // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005871 // kinesin complex // inferred from electronic annotation /// 0033267 // axon part // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0042826 // histone deacetylase binding // inferred from physical interaction /// 0050815 // phosphoserine binding // inferred from physical interaction /// 0051219 // phosphoprotein binding // inferred from physical interaction","chr17:1302126-1303500 (-) // 99.93 // p13.3"]
["11715575_x_at",703.6436,715.69403,746.24554,643.3739,681.3037,641.2662,0.023273468,0.047771454,0.10807896,-0.105914116,-0.023273468,-0.110648155,0.2639582,0.021194356,1.1016402,0.13965315,1.1016402,"up","PPM1G",5496.0,"0006470 // protein dephosphorylation // traceable author statement /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0007050 // cell cycle arrest // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0035970 // peptidyl-threonine dephosphorylation // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0008287 // protein serine/threonine phosphatase complex // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004722 // protein serine/threonine phosphatase activity // inferred from direct assay /// 0004722 // protein serine/threonine phosphatase activity // inferred from electronic annotation /// 0004722 // protein serine/threonine phosphatase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:27604065-27632422 (-) // 49.13 // p23.3"]
["11724103_x_at",15.848524,18.443993,15.371788,16.361118,20.640608,17.1284,-0.07898259,0.1398201,-0.12304592,-0.033059597,0.30215454,0.033059597,0.7430592,0.40575925,-1.0878309,-0.12145431,1.0878309,"down","C8orf44-SGK3 /// SGK3","100533105 /// 23678","0001558 // regulation of cell growth // traceable author statement /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from electronic annotation /// 0006950 // response to stress // traceable author statement /// 0007154 // cell communication // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030334 // regulation of cell migration // traceable author statement /// 0042127 // regulation of cell proliferation // traceable author statement /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // traceable author statement","0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0055037 // recycling endosome // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0005246 // calcium channel regulator activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0015459 // potassium channel regulator activity // traceable author statement /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0017080 // sodium channel regulator activity // traceable author statement /// 0017081 // chloride channel regulator activity // traceable author statement /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation","chr8:67624652-67774257 (+) // 83.03 // q13.1"]
["11742203_x_at",21.562204,25.189579,22.56903,21.4475,25.691639,21.31158,-0.032919884,0.19140244,0.032919884,-0.04061508,0.21987438,-0.049787045,0.9545219,0.8610964,1.0144118,0.020643443,1.0144118,"up","PCDHGA11 /// PCDHGA5 /// PCDHGA7 /// PCDHGC3","5098 /// 56105 /// 56108 /// 56110","0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007156 // homophilic cell adhesion // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0016339 // calcium-dependent cell-cell adhesion // non-traceable author statement","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr5:140800536-140892546 (+) // 100.0 // q31.3"]
["11718676_x_at",576.79584,584.13184,611.3156,648.30096,629.1671,596.5294,-0.066194534,-0.047961235,0.017662048,0.10240841,0.05918789,-0.017662048,0.51666325,0.13834783,-1.0571226,-0.080142684,1.0571226,"down","TMEM245",23731.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","","chr9:111777431-111882230 (-) // 82.14 // q31.3"]
["11736380_s_at",22.879326,29.38161,32.752598,28.776056,30.064754,27.222927,-0.34584665,0.015022278,0.17171812,-0.015022278,0.04818201,-0.09506893,0.95010704,0.8482391,-1.0227114,-0.03239908,1.0227114,"down","ZNF697",90874.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:120162044-120168767 (-) // 93.51 // p12"]
["11716547_s_at",22.776352,22.776352,22.00344,28.762003,21.46826,23.04449,0.0,0.0,-0.04980755,0.33662748,-0.08533144,0.01688528,0.7730082,0.4547171,-1.0762373,-0.10599624,1.0762373,"down","TLR9",54106.0,"0002237 // response to molecule of bacterial origin // traceable author statement /// 0006954 // inflammatory response // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007252 // I-kappaB phosphorylation // inferred from direct assay /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0030277 // maintenance of gastrointestinal epithelium // inferred from sequence or structural similarity /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0032715 // negative regulation of interleukin-6 production // inferred from sequence or structural similarity /// 0032717 // negative regulation of interleukin-8 production // inferred from direct assay /// 0032722 // positive regulation of chemokine production // inferred from direct assay /// 0032728 // positive regulation of interferon-beta production // inferred from sequence or structural similarity /// 0032733 // positive regulation of interleukin-10 production // inferred from sequence or structural similarity /// 0032735 // positive regulation of interleukin-12 production // inferred from sequence or structural similarity /// 0032741 // positive regulation of interleukin-18 production // inferred from sequence or structural similarity /// 0032755 // positive regulation of interleukin-6 production // inferred from direct assay /// 0032757 // positive regulation of interleukin-8 production // inferred from direct assay /// 0032760 // positive regulation of tumor necrosis factor production // inferred from sequence or structural similarity /// 0034122 // negative regulation of toll-like receptor signaling pathway // inferred from direct assay /// 0034123 // positive regulation of toll-like receptor signaling pathway // inferred from direct assay /// 0042346 // positive regulation of NF-kappaB import into nucleus // inferred from direct assay /// 0042742 // defense response to bacterium // non-traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from direct assay /// 0043507 // positive regulation of JUN kinase activity // inferred from direct assay /// 0045078 // positive regulation of interferon-gamma biosynthetic process // inferred from direct assay /// 0045087 // innate immune response // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation /// 0045356 // positive regulation of interferon-alpha biosynthetic process // inferred from direct assay /// 0045359 // positive regulation of interferon-beta biosynthetic process // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0046330 // positive regulation of JNK cascade // inferred by curator /// 0050729 // positive regulation of inflammatory response // inferred by curator /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0051770 // positive regulation of nitric-oxide synthase biosynthetic process // inferred from sequence or structural similarity","0000139 // Golgi membrane // traceable author statement /// 0005576 // extracellular region // non-traceable author statement /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005764 // lysosome // inferred from sequence or structural similarity /// 0005764 // lysosome // inferred from electronic annotation /// 0005768 // endosome // inferred from sequence or structural similarity /// 0005768 // endosome // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0010008 // endosome membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from direct assay /// 0016324 // apical plasma membrane // inferred from direct assay /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0032009 // early phagosome // inferred from sequence or structural similarity /// 0036020 // endolysosome membrane // traceable author statement /// 0045335 // phagocytic vesicle // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005149 // interleukin-1 receptor binding // inferred from physical interaction /// 0035197 // siRNA binding // inferred from mutant phenotype","chr3:52255096-52273276 (-) // 95.16 // p21.2"]
["11727286_a_at",63.69235,65.34645,62.46484,64.24914,61.66949,75.6203,-0.006278038,0.03071022,-0.03435421,0.006278515,-0.052841663,0.2413745,0.797058,0.4985667,-1.0484401,-0.068244435,1.0484401,"down","ZNF323",64288.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016032 // viral reproduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:28292513-28304722 (-) // 72.72 // p22.1"]
["11738762_at",43.5868,45.045673,40.794834,42.770447,46.631298,44.67699,-0.017820358,0.029676914,-0.11332512,-0.04509735,0.07958698,0.017820358,0.7438748,0.40681767,-1.0361692,-0.051259566,1.0361692,"down","OR6Q1",219952.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr11:57798401-57799403 (+) // 100.0 // q12.1"]
["11720400_at",56.94844,64.10361,51.69033,56.472725,46.412296,57.266182,0.0060510635,0.17680025,-0.13371086,-0.0060510635,-0.28909826,0.01407814,0.77210176,0.4538498,1.079281,0.1100705,1.079281,"up","NCS1",23413.0,"0010975 // regulation of neuron projection development // inferred from sequence or structural similarity /// 0010975 // regulation of neuron projection development // inferred from electronic annotation /// 0045921 // positive regulation of exocytosis // inferred from electronic annotation /// 0048015 // phosphatidylinositol-mediated signaling // inferred from electronic annotation /// 0051927 // negative regulation of calcium ion transport via voltage-gated calcium channel activity // inferred from sequence or structural similarity /// 0051927 // negative regulation of calcium ion transport via voltage-gated calcium channel activity // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0031045 // dense core granule // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005509 // calcium ion binding // traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr9:132934641-132999581 (+) // 87.16 // q34.11"]
["11756540_x_at",29.075392,28.970833,27.775393,25.217577,33.14961,31.175985,0.0025987625,-0.0025987625,-0.06339264,-0.20277023,0.19179201,0.103235245,0.88794404,0.6910846,-1.0366172,-0.05188318,1.0366172,"down","TMPRSS5",80975.0,"0006508 // proteolysis // inferred from mutant phenotype /// 0006508 // proteolysis // inferred from electronic annotation","0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0005044 // scavenger receptor activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from mutant phenotype /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr11:113558271-113577065 (-) // 95.05 // q23.2"]
["11756992_a_at",309.60364,309.5214,316.76416,312.6177,320.81415,315.50632,-0.020611763,-0.02099514,0.012374878,-0.006634712,0.030703545,0.006634712,0.6450063,0.2681679,-1.0139444,-0.019978525,1.0139444,"down","MARC2",54996.0,"0042126 // nitrate metabolic process // inferred from direct assay /// 0051410 // detoxification of nitrogen compound // non-traceable author statement /// 0055114 // oxidation-reduction process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005777 // peroxisome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0008940 // nitrate reductase activity // inferred from direct assay /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0030151 // molybdenum ion binding // inferred from direct assay /// 0030151 // molybdenum ion binding // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation /// 0043546 // molybdopterin cofactor binding // inferred from direct assay","chr1:220921610-220957580 (+) // 98.74 // q41"]
["11719313_a_at",160.66069,157.13464,163.13615,181.09935,165.70735,179.37405,-0.0333395,-0.0653553,-0.011280537,0.1394248,0.0112810135,0.12561464,0.33802396,0.041655064,-1.0933576,-0.12876529,1.0933576,"down","FAM111A",63901.0,"0008152 // metabolic process // inferred from electronic annotation","","0003824 // catalytic activity // inferred from electronic annotation","chr11:58910317-58922512 (+) // 78.28 // q12.1"]
["11733985_at",12.654682,12.318387,12.454028,13.2005825,11.263518,11.352116,0.030958414,-0.007899284,0.007899523,0.091888666,-0.13705516,-0.12575197,0.7540296,0.42230618,1.0477484,0.067292385,1.0477484,"up","SLC5A8",160728.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006811 // ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation /// 0015293 // symporter activity // inferred from electronic annotation","chr12:101549278-101604185 (-) // 92.54 // q23.1"]
["11718173_a_at",17.303984,17.236423,16.43254,14.085631,16.958387,15.810577,0.051826954,0.04618311,-0.022721767,-0.24505305,0.022721767,-0.07838726,0.5856111,0.19962908,1.0907614,0.12533557,1.0907614,"up","PNKD",25953.0,"","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0004416 // hydroxyacylglutathione hydrolase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:219135114-219211514 (+) // 83.14 // q35"]
["11735382_at",11.937821,14.46134,16.687414,12.232077,14.986522,13.863802,-0.24622297,0.030439138,0.23699808,-0.21109295,0.08190322,-0.030439377,0.9056078,0.7317358,1.0426689,0.060281154,1.0426689,"up","MARVELD3",91862.0,"0045216 // cell-cell junction organization // inferred from mutant phenotype","0005923 // tight junction // inferred from direct assay /// 0005923 // tight junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","","chr16:71660069-71669231 (+) // 81.29 // q22.2"]
["11724809_at",59.799934,61.522503,55.599937,58.11618,53.623356,56.128323,0.06630945,0.107280254,-0.03875017,0.025105953,-0.09097242,-0.025105476,0.62570524,0.24269433,1.0535586,0.07527054,1.0535586,"up","CBL",867.0,"0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0014068 // positive regulation of phosphatidylinositol 3-kinase cascade // inferred from mutant phenotype /// 0016567 // protein ubiquitination // traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0023051 // regulation of signaling // inferred from electronic annotation /// 0042059 // negative regulation of epidermal growth factor receptor signaling pathway // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0048260 // positive regulation of receptor-mediated endocytosis // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016600 // flotillin complex // inferred from sequence or structural similarity /// 0016600 // flotillin complex // inferred from electronic annotation","0001784 // phosphotyrosine binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0004842 // ubiquitin-protein ligase activity // traceable author statement /// 0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from physical interaction /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046875 // ephrin receptor binding // inferred from physical interaction /// 0046875 // ephrin receptor binding // inferred from electronic annotation","chr11:119076984-119178859 (+) // 95.88 // q23.3"]
["11761724_at",7.2129397,7.1033063,6.9768257,6.9438868,7.5302873,6.4854407,0.03505659,0.012959957,-0.012959957,-0.019787312,0.09717417,-0.11832619,0.8967265,0.71165437,1.0177139,0.025332054,1.0177139,"up","SCGB2A2",4250.0,"","","0005496 // steroid binding // inferred from electronic annotation","chr11:62037629-62039513 (+) // 77.86 // q12.3"]
["11749144_s_at",280.49442,277.5722,286.7166,300.83014,286.18152,289.85217,-0.030305862,-0.045414925,0.0013475418,0.07067108,-0.0013475418,0.017039299,0.46621937,0.10471176,-1.0378362,-0.053578753,1.0378362,"down","ETFDH",2110.0,"0006810 // transport // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from sequence or structural similarity /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0022900 // electron transport chain // inferred from direct assay /// 0022900 // electron transport chain // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0033539 // fatty acid beta-oxidation using acyl-CoA dehydrogenase // inferred from mutant phenotype /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0031305 // integral to mitochondrial inner membrane // inferred from direct assay /// 0031966 // mitochondrial membrane // inferred from direct assay /// 0031966 // mitochondrial membrane // inferred from electronic annotation","0004174 // electron-transferring-flavoprotein dehydrogenase activity // inferred from direct assay /// 0004174 // electron-transferring-flavoprotein dehydrogenase activity // inferred from electronic annotation /// 0009055 // electron carrier activity // inferred from direct assay /// 0016491 // oxidoreductase activity // inferred from direct assay /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0043783 // oxidoreductase activity, oxidizing metal ions with flavin as acceptor // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation /// 0048038 // quinone binding // inferred from direct assay /// 0048039 // ubiquinone binding // inferred from direct assay /// 0050660 // flavin adenine dinucleotide binding // inferred from sequence or structural similarity /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation /// 0051539 // 4 iron, 4 sulfur cluster binding // inferred from direct assay /// 0051539 // 4 iron, 4 sulfur cluster binding // inferred from electronic annotation","chr4:159602865-159629865 (+) // 91.13 // q32.1"]
["11754898_a_at",141.63034,150.80214,164.74228,153.15349,150.80214,146.83328,-0.09052658,0.0,0.12755442,0.022321224,0.0,-0.038477898,0.9334088,0.8006397,1.012364,0.017728154,1.012364,"up","ZNF573",126231.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:38229202-38270225 (-) // 91.64 // q13.12"]
["11736992_a_at",6.8443365,6.7133446,6.2413974,5.878147,6.1800246,6.7133446,0.08046031,0.05258131,-0.05258131,-0.13908911,-0.06683779,0.05258131,0.68728006,0.32197598,1.0555063,0.077935256,1.0555063,"up","C3orf55",152078.0,"","","","chr3:157261034-157296674 (+) // 94.65 // q25.32"]
["11721052_at",78.99192,83.63857,91.21731,84.25274,93.70735,79.37402,-0.08774042,-0.0052776337,0.11986208,0.0052781105,0.15871716,-0.0807786,0.9503146,0.8488669,-1.01311,-0.018790884,1.01311,"down","KLHDC5",57542.0,"","","","chr12:27932813-27955972 (+) // 90.33 // p11.22"]
["11746204_a_at",12.2853,13.852456,15.101755,11.513509,11.01369,11.190825,0.04680276,0.22001123,0.3445859,-0.046802998,-0.11083293,-0.08781409,0.30571005,0.031892374,1.2189312,0.2856167,1.2189312,"up","NFASC",23114.0,"0002175 // protein localization to paranode region of axon // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007411 // axon guidance // inferred from electronic annotation /// 0007422 // peripheral nervous system development // inferred from sequence or structural similarity /// 0007422 // peripheral nervous system development // inferred from electronic annotation /// 0019226 // transmission of nerve impulse // inferred from electronic annotation /// 0030913 // paranodal junction assembly // inferred from electronic annotation /// 0042552 // myelination // inferred from sequence or structural similarity /// 0042552 // myelination // inferred from electronic annotation /// 0050808 // synapse organization // inferred from electronic annotation /// 0071205 // protein localization to juxtaparanode region of axon // inferred from electronic annotation","0005622 // intracellular // inferred from sequence or structural similarity /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0033010 // paranodal junction // inferred from electronic annotation /// 0033268 // node of Ranvier // inferred from sequence or structural similarity /// 0033268 // node of Ranvier // traceable author statement /// 0033268 // node of Ranvier // inferred from electronic annotation /// 0033270 // paranode region of axon // inferred from electronic annotation /// 0043194 // initial segment // inferred from sequence or structural similarity","","chr1:204797700-204946274 (+) // 98.54 // q32.1"]
["11729367_at",11.248371,9.758612,10.4433775,8.784326,10.059944,10.333846,0.14171648,-0.063251734,0.034588814,-0.21499634,-0.01937747,0.01937747,0.6763063,0.3076638,1.078742,0.1093499,1.078742,"up","PRKAA2",5563.0,"0006112 // energy reserve metabolic process // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0006694 // steroid biosynthetic process // inferred from electronic annotation /// 0006695 // cholesterol biosynthetic process // inferred from electronic annotation /// 0006853 // carnitine shuttle // traceable author statement /// 0006914 // autophagy // inferred from electronic annotation /// 0006950 // response to stress // inferred from sequence or structural similarity /// 0006950 // response to stress // inferred from electronic annotation /// 0007050 // cell cycle arrest // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008610 // lipid biosynthetic process // inferred from sequence or structural similarity /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0010508 // positive regulation of autophagy // inferred from sequence or structural similarity /// 0010508 // positive regulation of autophagy // inferred from electronic annotation /// 0014823 // response to activity // inferred from electronic annotation /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0016126 // sterol biosynthetic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0019216 // regulation of lipid metabolic process // inferred from electronic annotation /// 0031000 // response to caffeine // inferred from electronic annotation /// 0031669 // cellular response to nutrient levels // inferred from sequence or structural similarity /// 0031669 // cellular response to nutrient levels // inferred from electronic annotation /// 0032007 // negative regulation of TOR signaling cascade // inferred from sequence or structural similarity /// 0032007 // negative regulation of TOR signaling cascade // inferred from electronic annotation /// 0035404 // histone-serine phosphorylation // inferred from sequence or structural similarity /// 0035404 // histone-serine phosphorylation // inferred from electronic annotation /// 0042149 // cellular response to glucose starvation // inferred from sequence or structural similarity /// 0042149 // cellular response to glucose starvation // inferred from electronic annotation /// 0042304 // regulation of fatty acid biosynthetic process // traceable author statement /// 0042593 // glucose homeostasis // inferred from sequence or structural similarity /// 0042593 // glucose homeostasis // inferred from electronic annotation /// 0042752 // regulation of circadian rhythm // inferred from sequence or structural similarity /// 0042752 // regulation of circadian rhythm // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from sequence or structural similarity /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045821 // positive regulation of glycolysis // inferred from sequence or structural similarity /// 0046320 // regulation of fatty acid oxidation // traceable author statement /// 0048511 // rhythmic process // inferred from electronic annotation /// 0051291 // protein heterooligomerization // inferred from electronic annotation /// 0055089 // fatty acid homeostasis // inferred from sequence or structural similarity /// 0071417 // cellular response to organic nitrogen // inferred from electronic annotation /// 2000505 // regulation of energy homeostasis // inferred from sequence or structural similarity","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0031588 // AMP-activated protein kinase complex // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from sequence or structural similarity /// 0003682 // chromatin binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from sequence or structural similarity /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004679 // AMP-activated protein kinase activity // inferred from direct assay /// 0004679 // AMP-activated protein kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0030674 // protein binding, bridging // inferred from electronic annotation /// 0035174 // histone serine kinase activity // inferred from sequence or structural similarity /// 0035174 // histone serine kinase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:57110845-57181008 (+) // 89.25 // p32.2"]
["11740483_at",21.045546,24.823614,26.934587,19.808514,28.140911,22.130003,-0.15534353,0.08285475,0.20060158,-0.24273777,0.26381063,-0.08285475,0.9117721,0.746214,1.0448518,0.0632983,1.0448518,"up","TNR",7143.0,"0007155 // cell adhesion // non-traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007158 // neuron cell-cell adhesion // inferred from electronic annotation /// 0007162 // negative regulation of cell adhesion // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007411 // axon guidance // non-traceable author statement /// 0008306 // associative learning // inferred from electronic annotation /// 0010977 // negative regulation of neuron projection development // inferred from electronic annotation /// 0022029 // telencephalon cell migration // inferred from electronic annotation /// 0022408 // negative regulation of cell-cell adhesion // inferred from electronic annotation /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0030517 // negative regulation of axon extension // inferred from electronic annotation /// 0035641 // locomotory exploration behavior // inferred from electronic annotation /// 0048692 // negative regulation of axon extension involved in regeneration // inferred from electronic annotation /// 0050804 // regulation of synaptic transmission // inferred from electronic annotation /// 0050805 // negative regulation of synaptic transmission // inferred from electronic annotation /// 0050808 // synapse organization // inferred from electronic annotation /// 0050885 // neuromuscular process controlling balance // inferred from electronic annotation /// 0051968 // positive regulation of synaptic transmission, glutamatergic // inferred from electronic annotation /// 0051971 // positive regulation of transmission of nerve impulse // inferred from electronic annotation /// 0060291 // long-term synaptic potentiation // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0009986 // cell surface // inferred from electronic annotation /// 0045121 // membrane raft // inferred from electronic annotation /// 0072534 // perineuronal net // inferred from electronic annotation","0005102 // receptor binding // inferred from electronic annotation /// 0005178 // integrin binding // inferred from electronic annotation","chr1:175291877-175712906 (-) // 96.65 // q25.1"]
["11715220_s_at",74.490135,78.15706,72.32756,77.902176,65.81708,80.789734,-0.032307148,0.03701973,-0.07481098,0.032307148,-0.21089458,0.0848155,0.98183185,0.93890864,1.0054847,0.007891129,1.0054847,"up","C2orf44",80304.0,"","","","chr2:24252205-24270296 (-) // 99.92 // p23.3"]
["11753116_a_at",42.32781,40.33426,38.70345,40.261696,42.234768,39.473267,0.07089901,0.0012989044,-0.058244705,-0.0012989044,0.06772423,-0.029830933,0.9612751,0.88080394,-1.005245,-0.007547118,1.005245,"down","SOX10",6663.0,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0001755 // neural crest cell migration // inferred from electronic annotation /// 0002052 // positive regulation of neuroblast proliferation // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0007422 // peripheral nervous system development // inferred from electronic annotation /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0014015 // positive regulation of gliogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030318 // melanocyte differentiation // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048469 // cell maturation // inferred from electronic annotation /// 0048484 // enteric nervous system development // inferred from electronic annotation /// 0048546 // digestive tract morphogenesis // inferred from electronic annotation /// 0048589 // developmental growth // inferred from electronic annotation /// 0048709 // oligodendrocyte differentiation // inferred from electronic annotation /// 0048863 // stem cell differentiation // inferred from electronic annotation /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0031315 // extrinsic to mitochondrial outer membrane // inferred from electronic annotation","0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from electronic annotation /// 0000980 // RNA polymerase II distal enhancer sequence-specific DNA binding // inferred from electronic annotation /// 0000981 // sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003713 // transcription coactivator activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0044212 // transcription regulatory region DNA binding // inferred from electronic annotation","chr22:38369456-38380562 (-) // 94.53 // q13.1"]
["11727099_a_at",30.92917,28.19448,34.170464,28.183413,28.900663,29.860098,0.07430744,-0.05924797,0.2180891,-0.059814453,-0.02355814,0.02355814,0.6763063,0.30781898,1.0700322,0.09765426,1.0700322,"up","NUMBL",9253.0,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0007405 // neuroblast proliferation // inferred from electronic annotation /// 0007409 // axonogenesis // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // inferred from direct assay /// 0019538 // protein metabolic process // inferred from direct assay /// 0021670 // lateral ventricle development // inferred from sequence or structural similarity /// 0021670 // lateral ventricle development // inferred from electronic annotation /// 0021849 // neuroblast division in subventricular zone // inferred from sequence or structural similarity /// 0021849 // neuroblast division in subventricular zone // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation /// 0034332 // adherens junction organization // inferred from electronic annotation /// 0050769 // positive regulation of neurogenesis // inferred from sequence or structural similarity /// 0050769 // positive regulation of neurogenesis // inferred from electronic annotation /// 0050775 // positive regulation of dendrite morphogenesis // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr19:41171813-41196558 (-) // 86.81 // q13.2"]
["11723740_s_at",408.1551,411.4867,422.492,411.45242,431.41272,416.30637,-0.02012825,-0.008399963,0.029678345,-0.008520126,0.059823036,0.008399963,0.79139507,0.4860933,-1.0136205,-0.019517602,1.0136205,"down","WDR36",134430.0,"0006364 // rRNA processing // inferred from electronic annotation /// 0007601 // visual perception // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0032040 // small-subunit processome // inferred from electronic annotation","","chr5:110427869-110466200 (+) // 82.61 // q22.1"]
["11716683_x_at",423.2073,423.9126,412.79575,358.12057,372.11905,369.3737,0.11076832,0.113170624,0.07483196,-0.1301508,-0.07483196,-0.08551502,0.08459432,7.268027E-4,1.1458538,0.19642292,1.1458538,"up","SLC39A9",55334.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006829 // zinc ion transport // inferred from electronic annotation /// 0030001 // metal ion transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0046873 // metal ion transmembrane transporter activity // inferred from electronic annotation","chr14:69865074-69929107 (+) // 97.91 // q24.1"]
["11754466_a_at",290.46057,287.05853,290.5078,264.96268,268.21115,278.27307,0.039419174,0.022421837,0.039653778,-0.09313393,-0.075553894,-0.022421837,0.20729958,0.011405835,1.0699437,0.097534835,1.0699437,"up","SH3BP4",23677.0,"0006897 // endocytosis // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005905 // coated pit // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030136 // clathrin-coated vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr2:235887346-235964290 (+) // 99.53 // q37.2"]
["11760417_at",11.962452,10.5723715,14.4033375,12.400545,13.343357,14.723621,-0.10474968,-0.2829635,0.16314054,-0.052859068,0.052859068,0.19487,0.73881364,0.39883685,-1.1017632,-0.13981424,1.1017632,"down","DUOXA1",90527.0,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr15:45409568-45422075 (-) // 87.29 // q21.1"]
["11718211_s_at",179.48584,171.41273,169.25294,181.37405,163.04074,179.99158,0.03319788,-0.03319788,-0.05149126,0.048295975,-0.105439186,0.037257195,0.9539639,0.8594269,-1.0073291,-0.010535106,1.0073291,"down","PYCR1",5831.0,"0006561 // proline biosynthetic process // inferred from direct assay /// 0006561 // proline biosynthetic process // inferred from electronic annotation /// 0006561 // proline biosynthetic process // traceable author statement /// 0006950 // response to stress // inferred from electronic annotation /// 0008652 // cellular amino acid biosynthetic process // traceable author statement /// 0008652 // cellular amino acid biosynthetic process // inferred from electronic annotation /// 0034599 // cellular response to oxidative stress // inferred from mutant phenotype /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0055129 // L-proline biosynthetic process // inferred from electronic annotation","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0004735 // pyrroline-5-carboxylate reductase activity // inferred from direct assay /// 0004735 // pyrroline-5-carboxylate reductase activity // traceable author statement /// 0004735 // pyrroline-5-carboxylate reductase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction","chr17:79890259-79894968 (-) // 90.68 // q25.3"]
["11759535_at",8.79847,11.260296,11.129556,10.148301,11.8140545,9.164289,-0.27249265,0.08342767,0.066578865,-0.066578865,0.15268683,-0.21372223,0.99739075,0.99185485,1.0011855,0.0017093543,1.0011855,"up","MRPS12",6183.0,"0006412 // translation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005761 // mitochondrial ribosome // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0015935 // small ribosomal subunit // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr19:39421187-39423802 (+) // 80.09 // q13.2"]
["11737536_a_at",22.864584,25.038054,24.543247,26.422705,27.245377,28.154438,-0.16983557,-0.038827896,-0.06762409,0.038827896,0.08306122,0.1304121,0.26288724,0.021006498,-1.1299009,-0.17619628,1.1299009,"down","SAMD12",401474.0,"","","","chr8:119390226-119634184 (-) // 77.77 // q24.12"]
["11735581_a_at",12.66566,12.224701,13.132358,14.967938,12.948582,13.710142,-0.042037725,-0.09316087,0.01016593,0.19891548,-0.01016593,0.07228351,0.50452536,0.13022062,-1.0932994,-0.12868851,1.0932994,"down","MBNL3",55796.0,"0006397 // mRNA processing // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0043484 // regulation of RNA splicing // inferred from direct assay /// 0045662 // negative regulation of myoblast differentiation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chrX:131513231-131573718 (-) // 100.0 // q26.2"]
["11748319_x_at",23.530302,25.086287,25.588564,21.068123,18.064693,22.400475,0.03549528,0.12787437,0.15647459,-0.12396288,-0.3458519,-0.03549528,0.36062592,0.050288316,1.2100372,0.27505144,1.2100372,"up","TP53",7157.0,"0000060 // protein import into nucleus, translocation // inferred from electronic annotation /// 0000075 // cell cycle checkpoint // traceable author statement /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // not recorded /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0000733 // DNA strand renaturation // inferred from direct assay /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001756 // somitogenesis // inferred from electronic annotation /// 0001836 // release of cytochrome c from mitochondria // inferred from electronic annotation /// 0002309 // T cell proliferation involved in immune response // inferred from electronic annotation /// 0002326 // B cell lineage commitment // inferred from electronic annotation /// 0002360 // T cell lineage commitment // inferred from electronic annotation /// 0006284 // base-excision repair // traceable author statement /// 0006289 // nucleotide-excision repair // inferred from mutant phenotype /// 0006302 // double-strand break repair // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006461 // protein complex assembly // inferred from direct assay /// 0006915 // apoptotic process // inferred from direct assay /// 0006915 // apoptotic process // inferred from mutant phenotype /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from direct assay /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // inferred from electronic annotation /// 0006978 // DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator // inferred from mutant phenotype /// 0006983 // ER overload response // inferred from direct assay /// 0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from direct assay /// 0007050 // cell cycle arrest // inferred from mutant phenotype /// 0007265 // Ras protein signal transduction // inferred from expression pattern /// 0007275 // multicellular organismal development // inferred from mutant phenotype /// 0007369 // gastrulation // inferred from electronic annotation /// 0007406 // negative regulation of neuroblast proliferation // inferred from electronic annotation /// 0007417 // central nervous system development // inferred from electronic annotation /// 0007569 // cell aging // inferred from mutant phenotype /// 0007569 // cell aging // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008104 // protein localization // inferred from direct assay /// 0008156 // negative regulation of DNA replication // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from sequence or structural similarity /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0008340 // determination of adult lifespan // inferred from sequence or structural similarity /// 0008340 // determination of adult lifespan // inferred from electronic annotation /// 0008629 // induction of apoptosis by intracellular signals // traceable author statement /// 0009303 // rRNA transcription // inferred from electronic annotation /// 0009411 // response to UV // inferred from electronic annotation /// 0009792 // embryo development ending in birth or egg hatching // inferred from electronic annotation /// 0010165 // response to X-ray // not recorded /// 0010165 // response to X-ray // inferred from electronic annotation /// 0010332 // response to gamma radiation // inferred from mutant phenotype /// 0010332 // response to gamma radiation // inferred from electronic annotation /// 0030154 // cell differentiation // traceable author statement /// 0030308 // negative regulation of cell growth // inferred from mutant phenotype /// 0030330 // DNA damage response, signal transduction by p53 class mediator // inferred from direct assay /// 0030330 // DNA damage response, signal transduction by p53 class mediator // inferred from mutant phenotype /// 0030330 // DNA damage response, signal transduction by p53 class mediator // inferred from electronic annotation /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0031065 // positive regulation of histone deacetylation // not recorded /// 0031065 // positive regulation of histone deacetylation // inferred from electronic annotation /// 0031571 // mitotic cell cycle G1/S transition DNA damage checkpoint // inferred from mutant phenotype /// 0031571 // mitotic cell cycle G1/S transition DNA damage checkpoint // inferred from electronic annotation /// 0032461 // positive regulation of protein oligomerization // inferred from direct assay /// 0033077 // T cell differentiation in thymus // inferred from electronic annotation /// 0034613 // cellular protein localization // inferred from direct assay /// 0034644 // cellular response to UV // not recorded /// 0034644 // cellular response to UV // inferred from electronic annotation /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0035690 // cellular response to drug // inferred from expression pattern /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042149 // cellular response to glucose starvation // inferred from direct assay /// 0042493 // response to drug // inferred from electronic annotation /// 0042771 // DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis // inferred from direct assay /// 0042771 // DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043523 // regulation of neuron apoptotic process // inferred from electronic annotation /// 0043525 // positive regulation of neuron apoptotic process // not recorded /// 0043525 // positive regulation of neuron apoptotic process // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from genetic interaction /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046677 // response to antibiotic // inferred from expression pattern /// 0046902 // regulation of mitochondrial membrane permeability // traceable author statement /// 0046902 // regulation of mitochondrial membrane permeability // inferred from electronic annotation /// 0048147 // negative regulation of fibroblast proliferation // inferred from mutant phenotype /// 0048147 // negative regulation of fibroblast proliferation // inferred from electronic annotation /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from sequence or structural similarity /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0051097 // negative regulation of helicase activity // traceable author statement /// 0051262 // protein tetramerization // traceable author statement /// 0051262 // protein tetramerization // inferred from electronic annotation /// 0051276 // chromosome organization // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from electronic annotation /// 0070245 // positive regulation of thymocyte apoptotic process // inferred from sequence or structural similarity /// 0070245 // positive regulation of thymocyte apoptotic process // inferred from electronic annotation /// 0071158 // positive regulation of cell cycle arrest // inferred from mutant phenotype /// 0071456 // cellular response to hypoxia // inferred from expression pattern /// 0071479 // cellular response to ionizing radiation // inferred from mutant phenotype /// 0071850 // mitotic cell cycle arrest // inferred from electronic annotation /// 0072332 // signal transduction by p53 class mediator resulting in induction of apoptosis // inferred from mutant phenotype /// 0090200 // positive regulation of release of cytochrome c from mitochondria // inferred from direct assay /// 0090343 // positive regulation of cell aging // inferred from electronic annotation /// 0090399 // replicative senescence // inferred from mutant phenotype /// 0090403 // oxidative stress-induced premature senescence // inferred from mutant phenotype /// 2000379 // positive regulation of reactive oxygen species metabolic process // inferred from mutant phenotype /// 2001244 // positive regulation of intrinsic apoptotic signaling pathway // inferred from mutant phenotype","0000785 // chromatin // not recorded /// 0000790 // nuclear chromatin // inferred from direct assay /// 0005626 // insoluble fraction // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005657 // replication fork // not recorded /// 0005657 // replication fork // inferred from electronic annotation /// 0005669 // transcription factor TFIID complex // inferred from direct assay /// 0005678 // chromatin assembly complex // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005829 // cytosol // not recorded /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0016363 // nuclear matrix // inferred from direct assay /// 0016604 // nuclear body // inferred from direct assay /// 0016605 // PML body // inferred from direct assay /// 0016605 // PML body // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay","0000739 // DNA strand annealing activity // inferred from direct assay /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from electronic annotation /// 0001085 // RNA polymerase II transcription factor binding // inferred from physical interaction /// 0002020 // protease binding // inferred from physical interaction /// 0002039 // p53 binding // not recorded /// 0003677 // DNA binding // inferred from mutant phenotype /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from direct assay /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003684 // damaged DNA binding // not recorded /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005507 // copper ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008270 // zinc ion binding // traceable author statement /// 0019899 // enzyme binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0035033 // histone deacetylase regulator activity // inferred from electronic annotation /// 0035035 // histone acetyltransferase binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from physical interaction /// 0047485 // protein N-terminus binding // inferred from physical interaction /// 0051087 // chaperone binding // inferred from physical interaction /// 0051721 // protein phosphatase 2A binding // inferred from physical interaction /// 0070215 // MDM2 binding // inferred from electronic annotation","chr17:7576852-7579912 (-) // 85.89 // p13.1"]
["11757798_s_at",126.20734,117.36329,138.70735,128.11313,127.443405,134.12659,-0.017841816,-0.122656345,0.11840677,0.0037808418,-0.0037808418,0.06995773,0.89031523,0.69820356,-1.0214956,-0.030682962,1.0214956,"down","MAFB",9935.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0007379 // segment specification // inferred from electronic annotation /// 0007423 // sensory organ development // traceable author statement /// 0007585 // respiratory gaseous exchange // inferred from electronic annotation /// 0021571 // rhombomere 5 development // inferred from electronic annotation /// 0021572 // rhombomere 6 development // inferred from electronic annotation /// 0035284 // brain segmentation // inferred from electronic annotation /// 0042472 // inner ear morphogenesis // inferred from electronic annotation /// 0045647 // negative regulation of erythrocyte differentiation // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr20:39315595-39315960 (-) // 98.38 // q12"]
["11716029_a_at",3943.7922,3995.6997,4180.8735,3946.408,3952.2976,4002.0413,-0.010987282,0.00787735,0.07323551,-0.010028839,-0.0078783035,0.010165215,0.7255764,0.37970445,1.018154,0.025955826,1.018154,"up","NDUFB9",4715.0,"0006120 // mitochondrial electron transport, NADH to ubiquinone // non-traceable author statement /// 0006120 // mitochondrial electron transport, NADH to ubiquinone // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007605 // sensory perception of sound // traceable author statement /// 0022900 // electron transport chain // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005747 // mitochondrial respiratory chain complex I // inferred from direct assay /// 0005747 // mitochondrial respiratory chain complex I // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0070469 // respiratory chain // inferred from electronic annotation","0008137 // NADH dehydrogenase (ubiquinone) activity // non-traceable author statement /// 0008137 // NADH dehydrogenase (ubiquinone) activity // traceable author statement","chr8:125551354-125562215 (+) // 66.99 // q24.13"]
["11756982_x_at",379.5755,399.50925,390.5423,360.51978,372.14633,361.77026,0.014258385,0.08810043,0.055350304,-0.06005001,-0.014258385,-0.055054665,0.26128915,0.020724606,1.0685769,0.09569078,1.0685769,"up","AP3S2 /// C15orf38-AP3S2","100526783 /// 10239","0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation","0005794 // Golgi apparatus // inferred from electronic annotation /// 0005794 // Golgi apparatus // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030117 // membrane coat // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0008565 // protein transporter activity // inferred from electronic annotation","chr15:90377561-90437224 (-) // 79.11 // q26.1"]
["11731152_s_at",1021.01514,975.9614,1049.2341,990.2577,1049.862,985.30237,0.022064209,-0.04304409,0.0613966,-0.022064209,0.062259674,-0.029301643,0.9427819,0.8275415,1.0068445,0.009840916,1.0068445,"up","LOC100288963 /// MTRR","100288963 /// 4552","0006555 // methionine metabolic process // traceable author statement /// 0008652 // cellular amino acid biosynthetic process // inferred from electronic annotation /// 0009086 // methionine biosynthetic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0045111 // intermediate filament cytoskeleton // inferred from direct assay","0005506 // iron ion binding // inferred from electronic annotation /// 0010181 // FMN binding // traceable author statement /// 0010181 // FMN binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016723 // oxidoreductase activity, oxidizing metal ions, NAD or NADP as acceptor // inferred from direct assay /// 0030586 // [methionine synthase] reductase activity // traceable author statement /// 0030586 // [methionine synthase] reductase activity // inferred from electronic annotation /// 0050660 // flavin adenine dinucleotide binding // inferred from direct assay /// 0050660 // flavin adenine dinucleotide binding // traceable author statement /// 0050661 // NADP binding // traceable author statement","chr5:7869216-7901237 (+) // 99.27 // p15.31"]
["11752980_x_at",137.82362,151.31795,147.4499,151.09225,149.04074,151.20741,-0.12274456,0.012015343,-0.025343418,0.009861469,-0.009861469,0.010961056,0.6673385,0.29524007,-1.0345557,-0.049011283,1.0345557,"down","ABHD12",26090.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0016787 // hydrolase activity // inferred from electronic annotation /// 0047372 // acylglycerol lipase activity // inferred from electronic annotation","chr20:25281160-25371349 (-) // 99.56 // p11.21"]
["11761384_at",18.374603,18.63026,19.024466,18.778587,21.938396,20.563988,-0.040759087,-0.020824432,0.009383678,-0.009383678,0.21498585,0.121647835,0.50505155,0.13073707,-1.0916295,-0.12648329,1.0916295,"down","MPP3",4356.0,"0007165 // signal transduction // traceable author statement","0005887 // integral to plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from direct assay","0004385 // guanylate kinase activity // traceable author statement /// 0030165 // PDZ domain binding // inferred from electronic annotation","chr17:41892992-41910536 (-) // 99.25 // q21.31"]
["11755534_a_at",145.03337,141.76317,152.12083,140.14462,153.71278,144.546,0.0024280548,-0.030474186,0.07126093,-0.047039986,0.08627987,-0.0024280548,0.99005324,0.9675637,1.0014805,0.002134273,1.0014805,"up","ADCY7",113.0,"0006112 // energy reserve metabolic process // traceable author statement /// 0006171 // cAMP biosynthetic process // inferred from direct assay /// 0006171 // cAMP biosynthetic process // inferred from electronic annotation /// 0006833 // water transport // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007189 // adenylate cyclase-activating G-protein coupled receptor signaling pathway // traceable author statement /// 0007193 // adenylate cyclase-inhibiting G-protein coupled receptor signaling pathway // traceable author statement /// 0007202 // activation of phospholipase C activity // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0009190 // cyclic nucleotide biosynthetic process // inferred from electronic annotation /// 0030819 // positive regulation of cAMP biosynthetic process // inferred from direct assay /// 0034199 // activation of protein kinase A activity // traceable author statement /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0071361 // cellular response to ethanol // inferred from direct assay /// 0071377 // cellular response to glucagon stimulus // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004016 // adenylate cyclase activity // inferred from direct assay /// 0004016 // adenylate cyclase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0016849 // phosphorus-oxygen lyase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:50300461-50344439 (+) // 100.0 // q12.1"]
["11743468_at",1649.8792,1708.3016,1723.4917,1452.4574,1480.0902,1516.7992,0.06066513,0.1108675,0.12363911,-0.12319946,-0.09601021,-0.06066513,0.11203619,0.0019116633,1.1420946,0.19168216,1.1420946,"up","DKC1 /// SNORA56","1736 /// 677835","0000723 // telomere maintenance // traceable author statement /// 0001522 // pseudouridine synthesis // inferred from electronic annotation /// 0006364 // rRNA processing // inferred from electronic annotation /// 0006364 // rRNA processing // traceable author statement /// 0006396 // RNA processing // traceable author statement /// 0006396 // RNA processing // inferred from electronic annotation /// 0007004 // telomere maintenance via telomerase // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0009451 // RNA modification // inferred from electronic annotation /// 0042254 // ribosome biogenesis // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005697 // telomerase holoenzyme complex // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0015030 // Cajal body // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003720 // telomerase activity // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0009982 // pseudouridine synthase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation","chrX:153991013-154005959 (+) // 95.17 // q28"]
["11718574_at",488.9749,506.64346,505.65576,500.7759,472.7968,476.6069,-0.017202377,0.034008026,0.03119278,0.017202377,-0.06574249,-0.05416298,0.5631496,0.17827128,1.0354327,0.05023378,1.0354327,"up","SERBP1",26135.0,"0043488 // regulation of mRNA stability // non-traceable author statement /// 0045767 // regulation of anti-apoptosis // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0003730 // mRNA 3'-UTR binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction","chr1:67873494-67896452 (-) // 83.45 // p31.3"]
["11750463_a_at",33.98314,33.858982,26.91445,33.324245,35.761787,31.869204,0.016763687,0.011483192,-0.3196745,-0.011483192,0.0903635,-0.07589245,0.7791272,0.46401557,-1.0703914,-0.09813845,1.0703914,"down","CLEC4M",10332.0,"0006897 // endocytosis // inferred from electronic annotation /// 0007159 // leukocyte cell-cell adhesion // non-traceable author statement /// 0009988 // cell-cell recognition // traceable author statement /// 0019048 // virus-host interaction // traceable author statement /// 0019062 // viral attachment to host cell // traceable author statement /// 0019079 // viral genome replication // non-traceable author statement /// 0019882 // antigen processing and presentation // non-traceable author statement /// 0035556 // intracellular signal transduction // non-traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045087 // innate immune response // inferred from electronic annotation /// 0046795 // intracellular virion transport // traceable author statement /// 0046968 // peptide antigen transport // non-traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005622 // intracellular // traceable author statement /// 0005737 // cytoplasm // non-traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // non-traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0005537 // mannose binding // inferred from electronic annotation /// 0030246 // carbohydrate binding // non-traceable author statement /// 0030246 // carbohydrate binding // inferred from electronic annotation /// 0030369 // ICAM-3 receptor activity // non-traceable author statement /// 0042605 // peptide antigen binding // non-traceable author statement /// 0046790 // virion binding // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:7828129-7833874 (+) // 95.45 // p13.2"]
["11750057_a_at",78.197525,76.54066,78.90109,80.74868,73.0644,81.42636,-0.0064611435,-0.037357807,0.0064611435,0.039854527,-0.10441542,0.05191183,0.96155155,0.88154393,-1.0057253,-0.0082362555,1.0057253,"down","SPSB3",90864.0,"0016567 // protein ubiquitination // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation","chr16:1828064-1831498 (-) // 94.88 // p13.3"]
["11744305_a_at",20.708038,26.68341,23.41179,27.475178,25.535236,27.877287,-0.33402538,0.031726837,-0.15698099,0.07391262,-0.031726837,0.094873905,0.53452903,0.15235676,-1.1477271,-0.19877969,1.1477271,"down","LRRK1",79705.0,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr15:101459419-101610317 (+) // 96.93 // q26.3"]
["11744844_a_at",33.148876,29.275969,34.48961,30.623247,35.19102,32.096924,0.0232625,-0.15598059,0.08046436,-0.091070175,0.109509945,-0.0232625,0.9585456,0.8724812,-1.0110191,-0.015810268,1.0110191,"down","GON4L",54856.0,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation","chr1:155722633-155746250 (-) // 92.08 // q22"]
["11732552_a_at",7.101783,8.404941,7.258658,8.082003,8.119431,8.592482,-0.1898644,0.0531919,-0.15834284,-0.0033328533,0.0033328533,0.085029125,0.5809391,0.19474015,-1.0917795,-0.12668148,1.0917795,"down","ENKUR",219670.0,"","0005929 // cilium // inferred from electronic annotation /// 0019861 // flagellum // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005516 // calmodulin binding // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from electronic annotation","chr10:25270913-25305085 (-) // 75.02 // p12.1"]
["11761186_at",11.118972,10.5082655,10.493907,9.244917,11.3488455,9.181267,0.0824852,9.863377E-4,-9.863377E-4,-0.18380594,0.11200738,-0.19377303,0.69133323,0.327138,1.0837402,0.11601899,1.0837402,"up","DDX31",64794.0,"","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr9:135535749-135545403 (-) // 98.02 // q34.13"]
["11731147_at",8.931944,8.664294,9.517409,9.401821,11.177912,7.598208,-0.036983013,-0.08087492,0.054611444,0.036983013,0.28662157,-0.270298,0.9426029,0.8263686,-1.0272954,-0.03885102,1.0272954,"down","TLR7",51284.0,"0002224 // toll-like receptor signaling pathway // inferred from electronic annotation /// 0002282 // microglial cell activation involved in immune response // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007252 // I-kappaB phosphorylation // inferred from direct assay /// 0032722 // positive regulation of chemokine production // inferred from direct assay /// 0032755 // positive regulation of interleukin-6 production // inferred from electronic annotation /// 0032757 // positive regulation of interleukin-8 production // inferred from direct assay /// 0034154 // toll-like receptor 7 signaling pathway // inferred from electronic annotation /// 0042221 // response to chemical stimulus // inferred from electronic annotation /// 0042346 // positive regulation of NF-kappaB import into nucleus // inferred from direct assay /// 0045078 // positive regulation of interferon-gamma biosynthetic process // inferred from direct assay /// 0045087 // innate immune response // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation /// 0045356 // positive regulation of interferon-alpha biosynthetic process // inferred from direct assay /// 0045356 // positive regulation of interferon-alpha biosynthetic process // inferred from electronic annotation /// 0045359 // positive regulation of interferon-beta biosynthetic process // inferred from direct assay /// 0045416 // positive regulation of interleukin-8 biosynthetic process // inferred from mutant phenotype /// 0050729 // positive regulation of inflammatory response // inferred by curator /// 0051607 // defense response to virus // inferred from mutant phenotype /// 0051607 // defense response to virus // inferred from electronic annotation /// 0052033 // pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response // inferred from electronic annotation /// 0071260 // cellular response to mechanical stimulus // inferred from expression pattern","0000139 // Golgi membrane // traceable author statement /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005764 // lysosome // inferred from sequence or structural similarity /// 0005764 // lysosome // inferred from electronic annotation /// 0005768 // endosome // inferred from sequence or structural similarity /// 0005768 // endosome // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0010008 // endosome membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0032009 // early phagosome // inferred from sequence or structural similarity /// 0032009 // early phagosome // inferred from electronic annotation /// 0036020 // endolysosome membrane // traceable author statement /// 0045335 // phagocytic vesicle // inferred from electronic annotation","0003725 // double-stranded RNA binding // inferred from direct assay /// 0003727 // single-stranded RNA binding // inferred from sequence or structural similarity /// 0003727 // single-stranded RNA binding // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0008144 // drug binding // inferred from electronic annotation /// 0035197 // siRNA binding // inferred from sequence or structural similarity /// 0035197 // siRNA binding // inferred from electronic annotation","chrX:12885115-12908480 (+) // 93.51 // p22.2"]
["11755706_a_at",705.8304,719.7219,740.34406,716.2203,669.5924,700.8032,-0.010540962,0.017577171,0.058333397,0.010540962,-0.08657932,-0.020853043,0.58238375,0.19620168,1.0382019,0.054087073,1.0382019,"up","BBX",56987.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation","chr3:107429296-107491917 (+) // 82.37 // q13.12"]
["11716548_x_at",78.734184,76.486664,79.83961,64.01206,61.694954,64.28939,0.16709614,0.12531376,0.18721056,-0.13155031,-0.18474197,-0.12531376,0.06607926,3.0432912E-4,1.2371973,0.30707556,1.2371973,"up","FGFR1",2260.0,"0000165 // MAPK cascade // traceable author statement /// 0001501 // skeletal system development // traceable author statement /// 0001764 // neuron migration // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006468 // protein phosphorylation // non-traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from genetic interaction /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from direct assay /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from genetic interaction /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from physical interaction /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from electronic annotation /// 0010518 // positive regulation of phospholipase activity // traceable author statement /// 0010863 // positive regulation of phospholipase C activity // inferred from direct assay /// 0014068 // positive regulation of phosphatidylinositol 3-kinase cascade // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016477 // cell migration // traceable author statement /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0043009 // chordate embryonic development // traceable author statement /// 0043406 // positive regulation of MAP kinase activity // inferred from direct assay /// 0043410 // positive regulation of MAPK cascade // inferred from mutant phenotype /// 0045595 // regulation of cell differentiation // traceable author statement /// 0045666 // positive regulation of neuron differentiation // inferred from mutant phenotype /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0048705 // skeletal system morphogenesis // traceable author statement","0005576 // extracellular region // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005007 // fibroblast growth factor-activated receptor activity // inferred from direct assay /// 0005007 // fibroblast growth factor-activated receptor activity // traceable author statement /// 0005007 // fibroblast growth factor-activated receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008201 // heparin binding // inferred from direct assay /// 0008201 // heparin binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0017134 // fibroblast growth factor binding // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from physical interaction","chr8:38267736-38326352 (-) // 88.37 // p11.23"]
["11755506_a_at",487.22516,478.10135,571.9235,481.20734,579.87415,482.50278,0.0070257187,-0.020246506,0.23825932,-0.010904312,0.2581768,-0.0070257187,0.9904815,0.9686045,-1.00352,-0.0050693867,1.00352,"down","PICALM",8301.0,"0006461 // protein complex assembly // traceable author statement /// 0006897 // endocytosis // inferred from electronic annotation /// 0006898 // receptor-mediated endocytosis // inferred from direct assay /// 0006898 // receptor-mediated endocytosis // inferred from electronic annotation /// 0006898 // receptor-mediated endocytosis // inferred from sequence or structural similarity /// 0007409 // axonogenesis // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // traceable author statement /// 0016197 // endosomal transport // inferred from mutant phenotype /// 0030097 // hemopoiesis // inferred from electronic annotation /// 0030100 // regulation of endocytosis // inferred from mutant phenotype /// 0031623 // receptor internalization // inferred from mutant phenotype /// 0032880 // regulation of protein localization // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0048261 // negative regulation of receptor-mediated endocytosis // inferred from direct assay /// 0048268 // clathrin coat assembly // inferred from mutant phenotype /// 0048268 // clathrin coat assembly // inferred from electronic annotation /// 0048813 // dendrite morphogenesis // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005905 // coated pit // inferred from direct assay /// 0005905 // coated pit // inferred from electronic annotation /// 0005905 // coated pit // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0030118 // clathrin coat // inferred from electronic annotation /// 0030122 // AP-2 adaptor complex // inferred from direct assay /// 0030132 // clathrin coat of coated pit // inferred from direct assay /// 0030136 // clathrin-coated vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0042734 // presynaptic membrane // inferred from sequence or structural similarity /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0045211 // postsynaptic membrane // inferred from sequence or structural similarity /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0005545 // 1-phosphatidylinositol binding // inferred from sequence or structural similarity /// 0005545 // 1-phosphatidylinositol binding // inferred from electronic annotation /// 0030276 // clathrin binding // inferred from direct assay /// 0030276 // clathrin binding // inferred from electronic annotation /// 0030276 // clathrin binding // inferred from sequence or structural similarity /// 0032050 // clathrin heavy chain binding // inferred from direct assay","chr11:85669642-85693032 (-) // 93.19 // q14.2"]
["11727092_x_at",359.79745,352.41116,403.23834,425.8905,424.32358,395.62213,-0.15069294,-0.18061829,0.013754845,0.09260464,0.08728695,-0.013754845,0.42829084,0.08153419,-1.118241,-0.16123109,1.118241,"down","IL18",3606.0,"0000165 // MAPK cascade // inferred from mutant phenotype /// 0001525 // angiogenesis // inferred from direct assay /// 0001649 // osteoblast differentiation // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from direct assay /// 0006955 // immune response // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0009314 // response to radiation // inferred from electronic annotation /// 0009409 // response to cold // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0030155 // regulation of cell adhesion // inferred from direct assay /// 0030324 // lung development // inferred from electronic annotation /// 0030431 // sleep // inferred from sequence or structural similarity /// 0031663 // lipopolysaccharide-mediated signaling pathway // inferred from direct assay /// 0032722 // positive regulation of chemokine production // inferred from electronic annotation /// 0032725 // positive regulation of granulocyte macrophage colony-stimulating factor production // inferred from direct assay /// 0032729 // positive regulation of interferon-gamma production // inferred from direct assay /// 0032729 // positive regulation of interferon-gamma production // inferred from electronic annotation /// 0032731 // positive regulation of interleukin-1 beta production // inferred from electronic annotation /// 0032740 // positive regulation of interleukin-17 production // inferred from direct assay /// 0032757 // positive regulation of interleukin-8 production // inferred from electronic annotation /// 0032760 // positive regulation of tumor necrosis factor production // inferred from electronic annotation /// 0032819 // positive regulation of natural killer cell proliferation // inferred from direct assay /// 0032930 // positive regulation of superoxide anion generation // inferred from electronic annotation /// 0032967 // positive regulation of collagen biosynthetic process // inferred from electronic annotation /// 0034105 // positive regulation of tissue remodeling // inferred by curator /// 0042033 // chemokine biosynthetic process // traceable author statement /// 0042088 // T-helper 1 type immune response // inferred from direct assay /// 0042092 // type 2 immune response // traceable author statement /// 0042094 // interleukin-2 biosynthetic process // traceable author statement /// 0042095 // interferon-gamma biosynthetic process // traceable author statement /// 0042095 // interferon-gamma biosynthetic process // inferred from electronic annotation /// 0042104 // positive regulation of activated T cell proliferation // inferred from direct assay /// 0042231 // interleukin-13 biosynthetic process // traceable author statement /// 0042253 // granulocyte macrophage colony-stimulating factor biosynthetic process // traceable author statement /// 0043117 // positive regulation of vascular permeability // inferred from electronic annotation /// 0043434 // response to peptide hormone stimulus // inferred from electronic annotation /// 0043525 // positive regulation of neuron apoptotic process // inferred from electronic annotation /// 0048546 // digestive tract morphogenesis // inferred from electronic annotation /// 0050729 // positive regulation of inflammatory response // inferred by curator /// 0050966 // detection of mechanical stimulus involved in sensory perception of pain // inferred from electronic annotation /// 0051142 // positive regulation of NK T cell proliferation // inferred from direct assay /// 0055093 // response to hyperoxia // inferred from electronic annotation /// 0060312 // regulation of blood vessel remodeling // inferred from electronic annotation /// 0070301 // cellular response to hydrogen peroxide // inferred from electronic annotation /// 0071222 // cellular response to lipopolysaccharide // inferred from electronic annotation /// 0071260 // cellular response to mechanical stimulus // inferred from electronic annotation /// 0071320 // cellular response to cAMP // inferred from electronic annotation /// 0071346 // cellular response to interferon-gamma // inferred from electronic annotation /// 0071356 // cellular response to tumor necrosis factor // inferred from electronic annotation /// 0071374 // cellular response to parathyroid hormone stimulus // inferred from electronic annotation /// 0071375 // cellular response to peptide hormone stimulus // inferred from electronic annotation /// 0071407 // cellular response to organic cyclic compound // inferred from direct assay /// 2000256 // positive regulation of male germ cell proliferation // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016324 // apical plasma membrane // inferred from electronic annotation","0005125 // cytokine activity // inferred from electronic annotation /// 0005125 // cytokine activity // traceable author statement","chr11:112013973-112034840 (-) // 70.23 // q23.1"]
["11739992_at",8.787237,8.658214,8.608556,7.892372,7.743181,6.92265,0.092294455,0.07095432,0.062655926,-0.062656164,-0.09018874,-0.25179076,0.27748367,0.024372729,1.1568326,0.21018007,1.1568326,"up","PDZD7",79955.0,"","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005929 // cilium // inferred from direct assay /// 0005929 // cilium // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr10:102777089-102790901 (-) // 86.57 // q24.31"]
["11726243_a_at",9.403151,7.436571,9.903766,10.363534,10.364298,8.991761,-0.037416697,-0.37592316,0.037416458,0.10288334,0.10298967,-0.101956844,0.6930984,0.32994264,-1.1172457,-0.15994646,1.1172457,"down","ANKDD1A",348094.0,"0007165 // signal transduction // inferred from electronic annotation","","","chr15:65204100-65603681 (+) // 70.35 // q22.31"]
["11722121_a_at",104.477875,97.259254,95.693436,95.29054,104.30588,108.77466,0.05283308,-0.050457,-0.073872566,-0.07995939,0.050456524,0.1109786,0.7966071,0.49784967,-1.0359762,-0.05099082,1.0359762,"down","PC",5091.0,"0005975 // carbohydrate metabolic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006090 // pyruvate metabolic process // inferred from electronic annotation /// 0006094 // gluconeogenesis // inferred from electronic annotation /// 0006094 // gluconeogenesis // traceable author statement /// 0006107 // oxaloacetate metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement","0005625 // soluble fraction // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement /// 0005759 // mitochondrial matrix // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004075 // biotin carboxylase activity // inferred from electronic annotation /// 0004736 // pyruvate carboxylase activity // traceable author statement /// 0004736 // pyruvate carboxylase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0005524 // ATP binding // traceable author statement /// 0009374 // biotin binding // inferred from electronic annotation /// 0009374 // biotin binding // traceable author statement /// 0016874 // ligase activity // inferred from electronic annotation /// 0031406 // carboxylic acid binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:66615703-66725815 (-) // 94.37 // q13.2"]
["11743919_a_at",479.40457,484.86816,466.84177,472.54248,467.22366,507.46466,0.010399818,0.026748657,-0.027910233,-0.010399818,-0.026730537,0.09246349,0.9023613,0.7247937,-1.0107071,-0.015365026,1.0107071,"down","MAP3K7",6885.0,"0000165 // MAPK cascade // inferred from electronic annotation /// 0000186 // activation of MAPKK activity // inferred from direct assay /// 0000186 // activation of MAPKK activity // traceable author statement /// 0000186 // activation of MAPKK activity // inferred from electronic annotation /// 0000187 // activation of MAPK activity // inferred from direct assay /// 0000187 // activation of MAPK activity // traceable author statement /// 0000187 // activation of MAPK activity // inferred from electronic annotation /// 0001525 // angiogenesis // inferred from electronic annotation /// 0001841 // neural tube formation // inferred from electronic annotation /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002726 // positive regulation of T cell cytokine production // inferred from mutant phenotype /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0007249 // I-kappaB kinase/NF-kappaB cascade // traceable author statement /// 0007250 // activation of NF-kappaB-inducing kinase activity // inferred from mutant phenotype /// 0007252 // I-kappaB phosphorylation // inferred from direct assay /// 0007254 // JNK cascade // inferred from direct assay /// 0007254 // JNK cascade // traceable author statement /// 0008063 // Toll signaling pathway // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0032743 // positive regulation of interleukin-2 production // inferred from mutant phenotype /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from mutant phenotype /// 0043507 // positive regulation of JUN kinase activity // inferred from direct assay /// 0043507 // positive regulation of JUN kinase activity // inferred from mutant phenotype /// 0043966 // histone H3 acetylation // inferred from direct assay /// 0045087 // innate immune response // traceable author statement /// 0050852 // T cell receptor signaling pathway // non-traceable author statement /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0050870 // positive regulation of T cell activation // inferred by curator /// 0051092 // positive regulation of NF-kappaB transcription factor activity // traceable author statement /// 0051403 // stress-activated MAPK cascade // inferred from direct assay /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0070423 // nucleotide-binding oligomerization domain containing signaling pathway // traceable author statement","0005671 // Ada2/Gcn5/Ada3 transcription activator complex // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0008385 // IkappaB kinase complex // inferred from physical interaction /// 0010008 // endosome membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004708 // MAP kinase kinase activity // inferred from electronic annotation /// 0004709 // MAP kinase kinase kinase activity // inferred from direct assay /// 0004709 // MAP kinase kinase kinase activity // inferred from electronic annotation /// 0004709 // MAP kinase kinase kinase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:91225352-91297020 (-) // 99.7 // q15"]
["11730232_s_at",120.73012,122.351006,116.79792,112.624344,94.8447,105.54539,0.07401943,0.093259335,0.026247978,-0.026247978,-0.274127,-0.11990261,0.36735478,0.0524722,1.152368,0.20460144,1.152368,"up","TIAL1",7073.0,"0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // traceable author statement /// 0006952 // defense response // traceable author statement","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005764 // lysosome // traceable author statement /// 0010494 // cytoplasmic stress granule // inferred from sequence or structural similarity","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // non-traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement","chr10:121332837-121356540 (-) // 93.82 // q26.11"]
["11728597_a_at",60.027664,62.123634,66.348785,59.201107,61.47325,63.470726,-0.04192257,0.0075917244,0.10251951,-0.061926365,-0.0075917244,0.03854084,0.8266419,0.55495477,1.0231767,0.033055272,1.0231767,"up","ZNF222",7673.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:44529493-44537263 (+) // 92.27 // q13.31"]
["11754321_x_at",229.87398,233.32716,223.93463,244.61574,249.77045,242.38881,-0.048995018,-0.027484417,-0.086761,0.0406785,0.070764065,0.02748394,0.19256195,0.009482584,-1.0723102,-0.10072232,1.0723102,"down","SLC12A9",56996.0,"0006810 // transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0015377 // cation:chloride symporter activity // traceable author statement","chr7:100456357-100464632 (+) // 91.95 // q22.1"]
["11734047_s_at",8.518654,9.949663,9.638208,9.740997,10.024572,10.20086,-0.20873308,0.015289068,-0.030593634,-0.015289068,0.02611041,0.05126047,0.63124985,0.25046495,-1.0683417,-0.0953732,1.0683417,"down","SDR16C5",195814.0,"0008152 // metabolic process // inferred from electronic annotation /// 0042572 // retinol metabolic process // inferred from direct assay /// 0042572 // retinol metabolic process // inferred from electronic annotation /// 0042574 // retinal metabolic process // inferred from direct assay /// 0043616 // keratinocyte proliferation // inferred from mutant phenotype /// 0050908 // detection of light stimulus involved in visual perception // non-traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004745 // retinol dehydrogenase activity // inferred from direct assay /// 0004745 // retinol dehydrogenase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation","chr8:57212207-57233241 (-) // 94.25 // q12.1"]
["11756139_s_at",744.9557,759.02,828.12,732.9691,728.1765,734.67615,0.010023117,0.03700638,0.16270828,-0.013379097,-0.02284336,-0.010023117,0.5246857,0.14494127,1.0609287,0.08532771,1.0609287,"up","LOC728554 /// THOC3","728554 /// 84321","0006397 // mRNA processing // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0046784 // intronless viral mRNA export from host nucleus // inferred from direct assay /// 0051028 // mRNA transport // inferred from electronic annotation","0000346 // transcription export complex // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation","chr5:177302533-177311269 (+) // 95.89 // q35.3 /// chr5:175386533-175395273 (-) // 96.02 // q35.2"]
["11738248_a_at",50.310486,44.00374,49.66123,45.943127,47.739853,51.468723,0.04720211,-0.1460309,0.028462887,-0.083807945,-0.028462887,0.080039024,0.9602233,0.8786155,-1.0088497,-0.012711313,1.0088497,"down","C11orf71",54494.0,"","","","chr11:114270710-114271139 (-) // 48.15 // q23.2"]
["11762283_x_at",16.617887,14.290355,15.535881,15.323367,16.898252,13.988839,0.10706854,-0.1106267,0.009935379,-0.009935141,0.13120556,-0.141392,0.9799923,0.9343803,1.0061413,0.008832935,1.0061413,"up","TMX3",54495.0,"0006662 // glycerol ether metabolic process // inferred from electronic annotation /// 0045454 // cell redox homeostasis // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003756 // protein disulfide isomerase activity // inferred from electronic annotation /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0015035 // protein disulfide oxidoreductase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation","chr18:66364175-66382295 (-) // 88.02 // q22.1"]
["11734921_a_at",43.99779,48.84577,47.56289,56.30322,47.56289,48.042786,-0.119647026,0.031155586,-0.007241726,0.2361393,-0.007241726,0.007241726,0.66349554,0.2904417,-1.0796952,-0.11062413,1.0796952,"down","ZNF276",92822.0,"0006281 // DNA repair // inferred from electronic annotation /// 0006281 // DNA repair // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006461 // protein complex assembly // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007140 // male meiosis // inferred from electronic annotation /// 0008584 // male gonad development // inferred from electronic annotation /// 0008585 // female gonad development // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0043240 // Fanconi anaemia nuclear complex // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:89787394-89807330 (+) // 89.68 // q24.3"]
["11735254_at",77.109314,79.847206,80.00748,78.899,82.39524,73.362915,-0.041719437,0.008617401,0.011510372,-0.008617878,0.05393648,-0.113573074,0.9257195,0.77906996,1.0108397,0.0155542325,1.0108397,"up","NEK8",284086.0,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0072372 // primary cilium // inferred from sequence or structural similarity /// 0072372 // primary cilium // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:27055807-27069784 (+) // 86.08 // q11.2"]
["11739085_a_at",397.84683,390.40057,404.6094,381.0444,368.92032,370.16028,0.044755936,0.017498016,0.06907272,-0.017498016,-0.06414795,-0.0593071,0.21566616,0.012439172,1.0649309,0.09075984,1.0649309,"up","PCID2",55795.0,"0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043488 // regulation of mRNA stability // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0048536 // spleen development // inferred from sequence or structural similarity /// 0090267 // positive regulation of mitotic cell cycle spindle assembly checkpoint // inferred from mutant phenotype /// 2000117 // negative regulation of cysteine-type endopeptidase activity // inferred from mutant phenotype","","","chr13:113831924-113863025 (-) // 91.72 // q34"]
["11732111_a_at",536.81573,535.25555,563.9474,552.5877,594.09625,530.70044,-0.020888329,-0.025087357,0.050245285,0.020888329,0.12538147,-0.03741741,0.82429415,0.5503972,-1.024458,-0.03486091,1.024458,"down","TNFRSF21",27242.0,"0006915 // apoptotic process // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051402 // neuron apoptotic process // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr6:47199268-47277680 (-) // 92.51 // p12.3"]
["11741462_a_at",800.6358,803.55945,799.4903,871.94604,864.27136,881.6227,-0.057798386,-0.052539825,-0.059864044,0.065294266,0.052539825,0.08121681,0.05333698,1.3700305E-4,-1.0890607,-0.123084314,1.0890607,"down","PRKAG1",5571.0,"0006110 // regulation of glycolysis // traceable author statement /// 0006468 // protein phosphorylation // traceable author statement /// 0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0007050 // cell cycle arrest // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007283 // spermatogenesis // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0045860 // positive regulation of protein kinase activity // traceable author statement /// 0046320 // regulation of fatty acid oxidation // traceable author statement /// 0050790 // regulation of catalytic activity // inferred from electronic annotation /// 0051291 // protein heterooligomerization // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0031588 // AMP-activated protein kinase complex // inferred from sequence or structural similarity /// 0031588 // AMP-activated protein kinase complex // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004679 // AMP-activated protein kinase activity // inferred from sequence or structural similarity /// 0004691 // cAMP-dependent protein kinase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from sequence or structural similarity /// 0005524 // ATP binding // inferred from electronic annotation /// 0008603 // cAMP-dependent protein kinase regulator activity // traceable author statement /// 0016208 // AMP binding // inferred from sequence or structural similarity /// 0016208 // AMP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from direct assay /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0043531 // ADP binding // inferred from sequence or structural similarity","chr12:49396131-49412531 (-) // 90.1 // q13.12"]
["11724872_a_at",20.27581,20.209146,20.27295,22.46983,20.335407,20.917364,-0.002117157,-0.0068683624,-0.0023207664,0.14611244,0.002117157,0.04282427,0.5765622,0.19084674,-1.0478654,-0.0674534,1.0478654,"down","CLDN2",9075.0,"0016338 // calcium-independent cell-cell adhesion // inferred from sequence or structural similarity /// 0016338 // calcium-independent cell-cell adhesion // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0005923 // tight junction // inferred from sequence or structural similarity /// 0005923 // tight junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","0005198 // structural molecule activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from sequence or structural similarity /// 0042802 // identical protein binding // inferred from electronic annotation","chrX:106163633-106174091 (+) // 84.73 // q22.3"]
["11718840_s_at",867.1877,892.49164,889.796,899.62445,916.7821,901.3459,-0.047236443,-0.005742073,-0.010106087,0.005742073,0.032998085,0.008500099,0.42543533,0.07993561,-1.0258181,-0.036774945,1.0258181,"down","PDHX",8050.0,"0006090 // pyruvate metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0010510 // regulation of acetyl-CoA biosynthetic process from pyruvate // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement /// 0005759 // mitochondrial matrix // inferred from electronic annotation","0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation","chr11:34937676-35017675 (+) // 98.17 // p13"]
["11736536_a_at",33.25938,41.158924,29.084524,36.89947,37.389015,34.694416,-0.10539055,0.20205355,-0.29890013,0.044448376,0.063462734,-0.044448376,0.8402426,0.5856725,-1.0633132,-0.08856667,1.0633132,"down","LEAP2",116842.0,"0042742 // defense response to bacterium // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","","chr5:132206869-132210700 (+) // 94.66 // q31.1"]
["11720645_at",87.10131,93.52418,93.02281,83.04067,88.935036,88.04067,-0.02276659,0.07987833,0.07212305,-0.09164286,0.0072903633,-0.00729084,0.5631928,0.17839284,1.0523584,0.07362611,1.0523584,"up","SPTLC2",9517.0,"0006665 // sphingolipid metabolic process // traceable author statement /// 0006665 // sphingolipid metabolic process // inferred from electronic annotation /// 0006686 // sphingomyelin biosynthetic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009058 // biosynthetic process // inferred from electronic annotation /// 0030148 // sphingolipid biosynthetic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046511 // sphinganine biosynthetic process // inferred from electronic annotation /// 0046512 // sphingosine biosynthetic process // inferred from electronic annotation /// 0046513 // ceramide biosynthetic process // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0017059 // serine C-palmitoyltransferase complex // inferred from direct assay","0003824 // catalytic activity // inferred from electronic annotation /// 0004758 // serine C-palmitoyltransferase activity // inferred from direct assay /// 0004758 // serine C-palmitoyltransferase activity // inferred from electronic annotation /// 0004758 // serine C-palmitoyltransferase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation","chr14:77972340-78083116 (-) // 87.95 // q24.3"]
["11744080_x_at",10.161829,10.618276,11.109907,9.647436,13.023389,9.412809,-0.03169465,0.03169489,0.09699178,-0.10663748,0.32625008,-0.14215755,0.9904393,0.96851677,1.0045242,0.006512365,1.0045242,"up","PRSS1 /// PRSS2 /// PRSS3P2","154754 /// 5644 /// 5645","0006508 // proteolysis // inferred from direct assay /// 0006508 // proteolysis // inferred from electronic annotation /// 0007586 // digestion // inferred from electronic annotation /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0030307 // positive regulation of cell growth // traceable author statement /// 0030574 // collagen catabolic process // inferred from direct assay /// 0030574 // collagen catabolic process // inferred from mutant phenotype /// 0045087 // innate immune response // traceable author statement /// 0045785 // positive regulation of cell adhesion // traceable author statement","0005576 // extracellular region // inferred from direct assay /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from mutant phenotype /// 0005615 // extracellular space // inferred from electronic annotation /// 0031012 // extracellular matrix // traceable author statement","0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from direct assay /// 0004252 // serine-type endopeptidase activity // traceable author statement /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:142456512-142482415 (+) // 83.87 // q34"]
["11745848_a_at",286.29578,278.81183,293.05475,260.47644,236.55106,251.57329,0.08728409,0.049069405,0.12094784,-0.049069405,-0.18807077,-0.09924364,0.21451639,0.012288764,1.1470236,0.19789502,1.1470236,"up","TJP2",9414.0,"0006915 // apoptotic process // traceable author statement /// 0006921 // cellular component disassembly involved in apoptotic process // traceable author statement /// 0035329 // hippo signaling cascade // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005912 // adherens junction // inferred from electronic annotation /// 0005923 // tight junction // inferred from direct assay /// 0005923 // tight junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from direct assay /// 0030054 // cell junction // inferred from electronic annotation","0004385 // guanylate kinase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr9:71819713-71869646 (+) // 99.79 // q21.11"]
["11762322_at",15.345244,15.613898,15.179228,16.785164,15.691703,16.294367,-0.028624535,-0.003585577,-0.04431796,0.10077047,0.0035858154,0.057957172,0.38385004,0.059508625,-1.0567352,-0.07961385,1.0567352,"down","APOL4",80832.0,"0006629 // lipid metabolic process // non-traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // inferred from electronic annotation /// 0042157 // lipoprotein metabolic process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from sequence or structural similarity","0008289 // lipid binding // inferred from electronic annotation","chr22:36593501-36600789 (-) // 60.98 // q12.3"]
["11757247_s_at",23.838562,24.963503,24.632633,27.683266,27.407536,28.876421,-0.13389921,-0.06737614,-0.086625576,0.08181763,0.06737614,0.14269543,0.13124941,0.0031318576,-1.143347,-0.19326335,1.143347,"down","OR6W1P",89883.0,"","","","chr7:142759380-142760882 (-) // 90.75 // q34"]
["11729868_x_at",6.137598,7.2671976,6.362253,6.900229,6.8045435,6.702794,-0.13795638,0.10576868,-0.08609271,0.031013727,0.010867834,-0.010867834,0.8211585,0.54381824,-1.035096,-0.049764644,1.035096,"down","UGT3A1",133688.0,"0008152 // metabolic process // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0015020 // glucuronosyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0016758 // transferase activity, transferring hexosyl groups // inferred from electronic annotation","chr5:35953191-35991499 (-) // 93.03 // p13.2"]
["11718835_x_at",143.47852,143.91652,142.63585,143.34381,126.54069,141.41966,0.0049262047,0.009324074,-0.0035715103,0.0035719872,-0.17630672,-0.015925407,0.67743754,0.3093386,1.0471342,0.0664463,1.0471342,"up","PELP1",27043.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0071339 // MLL1 complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr17:4574678-4607632 (-) // 92.21 // p13.2"]
["11746193_a_at",234.66127,220.09949,229.33775,224.10664,222.47731,226.18175,0.05974579,-0.032678604,0.026639462,-0.0066485405,-0.017176151,0.0066485405,0.7667226,0.44477516,1.0165123,0.023627635,1.0165123,"up","METTL3",56339.0,"0001510 // RNA methylation // inferred from mutant phenotype /// 0001510 // RNA methylation // inferred from electronic annotation /// 0006139 // nucleobase-containing compound metabolic process // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0032259 // methylation // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0016607 // nuclear speck // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0016422 // mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity // inferred from mutant phenotype /// 0016422 // mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr14:21966305-21979482 (-) // 99.51 // q11.2"]
["11720655_s_at",548.7964,556.5572,565.0605,544.67346,548.9535,555.3745,-0.00880146,0.011457443,0.033332825,-0.019680977,-0.008388519,0.008388519,0.6494542,0.27390164,1.0129455,0.0185566,1.0129455,"up","BBX",56987.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation","chr3:107241782-107530171 (+) // 98.21 // q13.12"]
["11760997_at",9.512078,10.104516,11.267177,10.475481,8.923076,9.634357,-0.052798033,0.034369946,0.1914959,0.086386204,-0.14501739,-0.034369946,0.749448,0.4159898,1.0634038,0.08868959,1.0634038,"up","ARHGAP27",201176.0,"0006897 // endocytosis // inferred from electronic annotation /// 0006898 // receptor-mediated endocytosis // inferred from sequence or structural similarity /// 0007165 // signal transduction // inferred from electronic annotation /// 0032855 // positive regulation of Rac GTPase activity // inferred from sequence or structural similarity /// 0043089 // positive regulation of Cdc42 GTPase activity // inferred from sequence or structural similarity /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation","0005622 // intracellular // inferred from sequence or structural similarity /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from sequence or structural similarity /// 0030675 // Rac GTPase activator activity // inferred from sequence or structural similarity","chr17:43474753-43487765 (-) // 77.9 // q21.31"]
["11732850_x_at",204.78836,190.87404,181.98721,210.7342,211.874,209.04549,-0.01484108,-0.11635399,-0.18513775,0.026450157,0.034231663,0.014841557,0.3814832,0.05856437,-1.0947632,-0.1306188,1.0947632,"down","CTAGE15P /// CTAGE4 /// CTAGE6P /// CTAGE8 /// CTAGE9","100128553 /// 100142659 /// 340307 /// 441294 /// 643854","","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr7:143880361-143883171 (+) // 98.87 // q35 /// chr7:143268675-143271467 (+) // 96.82 // q35 /// chr6:132029582-132032392 (-) // 99.29 // q23.2 /// chr7:143963768-143966578 (-) // 98.76 // q35 /// chr7:143452194-143454986 (-) // 96.68 // q35"]
["11716284_s_at",2742.794,2711.7837,2834.1125,2704.378,2706.9053,2665.9482,0.017703056,0.0012989044,0.064953804,-0.0026464462,-0.0012989044,-0.023294449,0.522257,0.14287871,1.0260245,0.037065126,1.0260245,"up","GLO1",2739.0,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0005975 // carbohydrate metabolic process // non-traceable author statement /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006749 // glutathione metabolic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from direct assay /// 0006916 // anti-apoptosis // inferred from mutant phenotype /// 0006916 // anti-apoptosis // traceable author statement /// 0009438 // methylglyoxal metabolic process // inferred from electronic annotation","0005625 // soluble fraction // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement","0004462 // lactoylglutathione lyase activity // inferred from direct assay /// 0004462 // lactoylglutathione lyase activity // inferred from electronic annotation /// 0004462 // lactoylglutathione lyase activity // traceable author statement /// 0016829 // lyase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:38643715-38670952 (-) // 94.12 // p21.2"]
["11733574_at",46.177116,48.800507,47.674557,44.2537,42.551163,49.003857,-0.023020744,0.05669737,0.023020744,-0.084400654,-0.14100027,0.06269646,0.68800056,0.32317433,1.0519994,0.073133945,1.0519994,"up","PGBD4",161779.0,"","","","chr15:34394273-34396591 (+) // 81.47 // q14"]
["11745263_x_at",514.7161,518.21,496.87445,526.5634,497.34763,498.55698,0.0230093,0.032769203,-0.02788639,0.05583954,-0.0265131,-0.0230093,0.9464228,0.8372283,1.0049974,0.0071917297,1.0049974,"up","SNX17",9784.0,"0006707 // cholesterol catabolic process // inferred by curator /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // non-traceable author statement /// 0006898 // receptor-mediated endocytosis // inferred from electronic annotation /// 0007154 // cell communication // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016197 // endosomal transport // non-traceable author statement /// 0030100 // regulation of endocytosis // non-traceable author statement","0005622 // intracellular // non-traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0005769 // early endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0016020 // membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from direct assay /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0005102 // receptor binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0008289 // lipid binding // inferred from electronic annotation /// 0035091 // phosphatidylinositol binding // inferred from direct assay /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation /// 0050750 // low-density lipoprotein particle receptor binding // inferred from direct assay","chr2:27593362-27600100 (+) // 98.27 // p23.3"]
["11756435_a_at",789.35986,796.91754,764.3324,877.0151,866.0271,899.9771,-0.0737381,-0.059990883,-0.12022114,0.07818031,0.059990883,0.11546707,0.116851225,0.0022946794,-1.1244317,-0.16919607,1.1244317,"down","C1orf85",112770.0,"0030522 // intracellular receptor mediated signaling pathway // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 2001141 // regulation of RNA biosynthetic process // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005764 // lysosome // inferred from direct assay /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from sequence or structural similarity /// 0016021 // integral to membrane // inferred from electronic annotation","0000988 // protein binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from mutant phenotype /// 0004879 // ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from mutant phenotype /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay","chr1:156262486-156265468 (-) // 98.24 // q22"]
["11733815_at",10.947749,10.585299,10.585299,10.517124,9.382143,10.027212,0.053233147,0.004660845,0.004660845,-0.004661083,-0.16941166,-0.073480606,0.47484955,0.10978395,1.0742795,0.10336946,1.0742795,"up","RPL22L1",200916.0,"0006412 // translation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005840 // ribosome // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003735 // structural constituent of ribosome // inferred from electronic annotation","chr3:170582666-170588045 (-) // 76.44 // q26.2"]
["11760885_a_at",11.080292,11.615329,10.866055,11.30108,11.53805,11.846775,-0.043434143,0.02459979,-0.07160187,-0.014969349,0.014969587,0.053064346,0.6231948,0.23994255,-1.0337116,-0.04783367,1.0337116,"down","RXRB",6257.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0030522 // intracellular receptor mediated signaling pathway // inferred from direct assay /// 0043401 // steroid hormone mediated signaling pathway // inferred from electronic annotation /// 0048384 // retinoic acid receptor signaling pathway // inferred from electronic annotation /// 0055012 // ventricular cardiac muscle cell differentiation // inferred from electronic annotation /// 0060038 // cardiac muscle cell proliferation // inferred from electronic annotation /// 0071300 // cellular response to retinoic acid // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003707 // steroid hormone receptor activity // inferred from electronic annotation /// 0003713 // transcription coactivator activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0004879 // ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from direct assay /// 0004886 // 9-cis retinoic acid receptor activity // inferred from electronic annotation /// 0004886 // 9-cis retinoic acid receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0030375 // thyroid hormone receptor coactivator activity // inferred from electronic annotation /// 0042809 // vitamin D receptor binding // inferred from electronic annotation /// 0042974 // retinoic acid receptor binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046966 // thyroid hormone receptor binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr6:33163848-33168635 (-) // 97.99 // p21.32"]
["11716948_s_at",684.1107,681.3649,753.77496,695.2468,704.1601,685.1476,-0.012740135,-0.01854229,0.12716389,0.010555267,0.028933525,-0.010555267,0.8801877,0.6722945,1.0155885,0.022315994,1.0155885,"up","TM9SF3",56889.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005488 // binding // inferred from direct assay","chr10:98277867-98346797 (-) // 96.48 // q24.1"]
["11716170_at",50.75811,49.52251,42.978546,38.79393,43.277264,46.045376,0.1853056,0.14975166,-0.05471611,-0.20250177,-0.04472351,0.04472351,0.58267945,0.19664472,1.1180212,0.1609476,1.1180212,"up","LMNB2",84823.0,"","0005634 // nucleus // inferred from electronic annotation /// 0005637 // nuclear inner membrane // inferred from electronic annotation /// 0005638 // lamin filament // inferred from electronic annotation /// 0005652 // nuclear lamina // non-traceable author statement /// 0005882 // intermediate filament // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005198 // structural molecule activity // inferred from electronic annotation","chr19:2428163-2456994 (-) // 98.03 // p13.3"]
["11750767_x_at",30.104868,28.431479,27.35369,30.700207,28.637445,30.554447,0.03604698,-0.04646063,-0.10221434,0.06429863,-0.03604698,0.05743265,0.64590144,0.26922694,-1.0468858,-0.06610414,1.0468858,"down","SLC17A7",57030.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006811 // ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0006817 // phosphate ion transport // traceable author statement /// 0006817 // phosphate ion transport // inferred from electronic annotation /// 0006836 // neurotransmitter transport // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007268 // synaptic transmission // inferred from electronic annotation /// 0007269 // neurotransmitter secretion // traceable author statement /// 0007616 // long-term memory // inferred from electronic annotation /// 0014047 // glutamate secretion // traceable author statement /// 0015813 // L-glutamate transport // traceable author statement /// 0035249 // synaptic transmission, glutamatergic // inferred from electronic annotation /// 0042137 // sequestering of neurotransmitter // inferred from electronic annotation /// 0044341 // sodium-dependent phosphate transport // traceable author statement /// 0044341 // sodium-dependent phosphate transport // inferred from electronic annotation /// 0051938 // L-glutamate import // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0060079 // regulation of excitatory postsynaptic membrane potential // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0019717 // synaptosome // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030672 // synaptic vesicle membrane // traceable author statement /// 0030672 // synaptic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0048786 // presynaptic active zone // inferred from electronic annotation /// 0060076 // excitatory synapse // inferred from electronic annotation /// 0060203 // clathrin sculpted glutamate transport vesicle membrane // traceable author statement","0005313 // L-glutamate transmembrane transporter activity // traceable author statement /// 0005315 // inorganic phosphate transmembrane transporter activity // inferred from electronic annotation /// 0015293 // symporter activity // inferred from electronic annotation /// 0015319 // sodium:inorganic phosphate symporter activity // inferred from direct assay /// 0015321 // sodium-dependent phosphate transmembrane transporter activity // inferred from electronic annotation /// 0015321 // sodium-dependent phosphate transmembrane transporter activity // traceable author statement","chr19:49933242-49945617 (-) // 99.96 // q13.33"]
["AFFX-DapX-5_at",157.20227,151.01917,157.32245,162.686,156.95479,162.52408,-5.5122375E-4,-0.05844164,5.5122375E-4,0.048916817,-0.0028243065,0.047480106,0.49412388,0.121689014,-1.0357468,-0.05067138,1.0357468,"down",5.5122375E-4,"","","0001680 // tRNA 3'-terminal CCA addition // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006396 // RNA processing // inferred from electronic annotation /// 0006464 // cellular protein modification process // inferred from electronic annotation /// 0008033 // tRNA processing // inferred from electronic annotation /// 0008652 // cellular amino acid biosynthetic process // inferred from electronic annotation /// 0009058 // biosynthetic process // inferred from electronic annotation /// 0009085 // lysine biosynthetic process // inferred from electronic annotation /// 0009089 // lysine biosynthetic process via diaminopimelate // inferred from electronic annotation /// 0019242 // methylglyoxal biosynthetic process // inferred from electronic annotation /// 0019877 // diaminopimelate biosynthetic process // inferred from electronic annotation /// 0042245 // RNA repair // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004077 // biotin-[acetyl-CoA-carboxylase] ligase activity // inferred from electronic annotation /// 0004810 // tRNA adenylyltransferase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008839 // dihydrodipicolinate reductase activity // inferred from electronic annotation /// 0008929 // methylglyoxal synthase activity // inferred from electronic annotation /// 0016437 // tRNA cytidylyltransferase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0016779 // nucleotidyltransferase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0052927 // CTP:tRNA cytidylyltransferase activity // inferred from electronic annotation /// 0052928 // CTP:3'-cytidine-tRNA cytidylyltransferase activity // inferred from electronic annotation /// 0052929 // ATP:3'-cytidine-cytidine-tRNA adenylyltransferase activity // inferred from electronic annotation /// 0070402 // NADPH binding // inferred from electronic annotation"]
["11749613_a_at",624.40607,590.71985,651.8117,625.31476,623.86395,627.8318,-0.0010490417,-0.081059456,0.06092167,0.0010490417,-0.0023021698,0.0068445206,0.9471653,0.83901644,-1.0062063,-0.008926091,1.0062063,"down","OCIAD1",54940.0,"","0005739 // mitochondrion // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr4:48833075-48854521 (+) // 72.28 // p11"]
["11729308_at",178.75339,184.54071,188.16995,200.37401,198.1252,195.73775,-0.102508545,-0.056540012,-0.02844286,0.062216282,0.04593277,0.02844286,0.20029292,0.010334997,-1.0777539,-0.108027786,1.0777539,"down","CLMP",79827.0,"","0005624 // membrane fraction // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005923 // tight junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","","chr11:122942175-123066013 (-) // 88.85 // q24.1"]
["11751327_a_at",179.72792,178.87585,172.87393,182.08072,179.374,177.61282,0.004848957,-0.002006054,-0.051244736,0.023612976,0.002006054,-0.012229443,0.7215571,0.37208778,-1.0143793,-0.020597158,1.0143793,"down","FAM114A2",10827.0,"","","0017076 // purine nucleotide binding // non-traceable author statement","chr5:153372514-153418467 (-) // 99.71 // q33.2"]
["11745516_a_at",219.4023,194.16048,203.37402,193.23083,183.38564,195.54073,0.17121887,-0.005109787,0.06177616,-0.012033939,-0.08747864,0.005109787,0.52019334,0.14139582,1.077307,0.107429415,1.077307,"up","STX16",8675.0,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006891 // intra-Golgi vesicle-mediated transport // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0042147 // retrograde transport, endosome to Golgi // inferred from direct assay","0000139 // Golgi membrane // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005792 // microsome // traceable author statement /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005794 // Golgi apparatus // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031201 // SNARE complex // traceable author statement","0005484 // SNAP receptor activity // inferred from direct assay /// 0005484 // SNAP receptor activity // inferred from electronic annotation /// 0005484 // SNAP receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr20:57226308-57251581 (+) // 95.58 // q13.32"]
["11719702_a_at",181.58615,183.95944,172.14883,167.98643,170.10556,177.6929,0.05413294,0.07286692,-0.022864819,-0.058176517,-0.040091038,0.022864342,0.5785284,0.19250314,1.0423546,0.05984613,1.0423546,"up","FARP1",10160.0,"0010923 // negative regulation of phosphatase activity // inferred from direct assay /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005856 // cytoskeleton // traceable author statement /// 0019898 // extrinsic to membrane // inferred from electronic annotation","0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // traceable author statement /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0008092 // cytoskeletal protein binding // inferred from electronic annotation","chr13:98795363-99102023 (+) // 94.6 // q32.2"]
["11747978_a_at",31.310715,31.147137,27.4544,31.844154,29.382338,28.860943,0.049632072,0.042075157,-0.13998699,0.07400417,-0.042075157,-0.0679059,0.9876092,0.95945144,-1.0028466,-0.0041009397,1.0028466,"down","MYRIP",25924.0,"0006886 // intracellular protein transport // inferred from electronic annotation /// 0032024 // positive regulation of insulin secretion // inferred from sequence or structural similarity","0001750 // photoreceptor outer segment // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0030133 // transport vesicle // inferred from electronic annotation /// 0031045 // dense core granule // inferred from sequence or structural similarity /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // non-traceable author statement /// 0017022 // myosin binding // inferred from electronic annotation /// 0017137 // Rab GTPase binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:40141501-40299833 (+) // 99.96 // p22.1"]
["11746987_a_at",5.8820605,5.4566293,5.758842,5.426524,5.7470226,6.021957,0.03202486,-0.07628679,0.0014820099,-0.08426833,-0.0014820099,0.06593561,0.96554095,0.89430624,-1.0053202,-0.0076550683,1.0053202,"down","ADAM2",2515.0,"0006508 // proteolysis // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007229 // integrin-mediated signaling pathway // inferred from electronic annotation /// 0007342 // fusion of sperm to egg plasma membrane // traceable author statement /// 0008542 // visual learning // inferred from electronic annotation /// 0030534 // adult behavior // inferred from electronic annotation","0001669 // acrosomal vesicle // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0005178 // integrin binding // traceable author statement /// 0008237 // metallopeptidase activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation","chr8:39601256-39695728 (-) // 99.18 // p11.22"]
["11752377_a_at",54.535095,53.579063,58.040607,60.271416,45.454823,57.56541,-0.039008617,-0.064524174,0.050868988,0.1052804,-0.3017602,0.039008617,0.9342806,0.80269164,1.0245112,0.03493578,1.0245112,"up","CASC3",22794.0,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0008298 // intracellular mRNA localization // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0051028 // mRNA transport // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016607 // nuclear speck // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0035145 // exon-exon junction complex // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from direct assay","chr17:38296569-38328417 (+) // 90.72 // q21.1"]
["11737242_at",8.403518,9.353615,9.068586,8.859655,9.371563,8.604129,-0.09307051,0.06146002,0.016813755,-0.016813517,0.06422591,-0.059034824,0.99581814,0.98642343,-1.0007337,-0.0010581651,1.0007337,"down","TMEM233",387890.0,"0009607 // response to biotic stimulus // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr12:120031263-120080654 (+) // 67.61 // q24.23"]
["11747575_a_at",25.44598,25.481161,27.912848,25.019358,25.586966,25.122688,-9.965897E-4,9.965897E-4,0.13249493,-0.025389671,0.006974697,-0.019443512,0.65293807,0.27805552,1.0401449,0.056784548,1.0401449,"up","SORBS3",10174.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006936 // muscle contraction // traceable author statement /// 0007155 // cell adhesion // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0031589 // cell-substrate adhesion // inferred from electronic annotation /// 0043410 // positive regulation of MAPK cascade // inferred from electronic annotation /// 0051495 // positive regulation of cytoskeleton organization // non-traceable author statement /// 0051496 // positive regulation of stress fiber assembly // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0005925 // focal adhesion // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","0005200 // structural constituent of cytoskeleton // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0017166 // vinculin binding // inferred from physical interaction","chr8:22409460-22432561 (+) // 96.16 // p21.3"]
["11744492_x_at",922.54095,885.7292,989.2815,914.224,997.5405,927.38354,-0.0037765503,-0.06252384,0.09699154,-0.016841888,0.1089859,0.0037765503,0.9086506,0.7383986,-1.0151854,-0.021743163,1.0151854,"down","SRSF5",6430.0,"0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006376 // mRNA splice site selection // traceable author statement /// 0006397 // mRNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0009611 // response to wounding // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0031124 // mRNA 3'-end processing // traceable author statement /// 0051726 // regulation of cell cycle // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0016607 // nuclear speck // inferred from sequence or structural similarity","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0050733 // RS domain binding // inferred from electronic annotation","chr14:70233898-70238721 (+) // 96.54 // q24.2"]
["11726346_a_at",56.113354,61.935795,60.307842,59.055904,54.5316,58.238533,-0.06368351,0.07874584,0.040318012,0.010053635,-0.10493517,-0.010053635,0.73214114,0.38923022,1.0377353,0.053438555,1.0377353,"up","LAT2",7462.0,"0019722 // calcium-mediated signaling // inferred from genetic interaction /// 0035556 // intracellular signal transduction // inferred from genetic interaction /// 0042113 // B cell activation // inferred from direct assay /// 0042113 // B cell activation // traceable author statement /// 0043303 // mast cell degranulation // inferred from electronic annotation /// 0050853 // B cell receptor signaling pathway // inferred from direct assay","0005622 // intracellular // inferred from genetic interaction /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0045121 // membrane raft // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0042169 // SH2 domain binding // inferred from mutant phenotype","chr7:73624086-73644161 (+) // 92.78 // q11.23"]
["11760127_at",551.3512,548.85156,570.5045,539.4488,585.0744,518.84344,0.0032777786,-0.0032777786,0.052544594,-0.028207779,0.088926315,-0.084394455,0.87593234,0.6625547,1.0177667,0.025406914,1.0177667,"up","LIMS1",3987.0,"0007569 // cell aging // traceable author statement /// 0034329 // cell junction assembly // traceable author statement /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0071560 // cellular response to transforming growth factor beta stimulus // inferred from expression pattern","0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0005925 // focal adhesion // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:109150810-109303702 (+) // 82.8 // q12.3"]
["11716621_a_at",1512.18,1555.9875,1483.3528,1394.3715,1367.1067,1427.5479,0.05542946,0.0966301,0.027661324,-0.061585426,-0.09007454,-0.027661324,0.20674692,0.011340986,1.0864943,0.11968064,1.0864943,"up","TNPO1",3842.0,"0000060 // protein import into nucleus, translocation // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0005515 // protein binding // inferred from physical interaction /// 0008139 // nuclear localization sequence binding // traceable author statement /// 0008565 // protein transporter activity // inferred from electronic annotation","chr5:72112414-72210215 (+) // 90.72 // q13.2"]
["11727755_a_at",23.057161,22.670385,22.946499,23.057161,18.144073,23.452372,0.0034704208,-0.020935535,-0.0034704208,0.0034704208,-0.34224606,0.027989388,0.77959365,0.46502575,1.0692631,0.09661688,1.0692631,"up","ZNF653",115950.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:11594241-11616821 (-) // 94.11 // p13.2"]
["11754381_a_at",26.341629,24.149664,22.500322,26.901314,26.65116,24.483194,0.052776337,-0.07256508,-0.17462254,0.083108425,0.069630146,-0.052776337,0.6550999,0.28045085,-1.070381,-0.098124474,1.070381,"down","TMOD1",7111.0,"0030049 // muscle filament sliding // traceable author statement /// 0030239 // myofibril assembly // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0008180 // signalosome // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030016 // myofibril // inferred from electronic annotation /// 0030863 // cortical cytoskeleton // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0005523 // tropomyosin binding // inferred from electronic annotation","chr9:100360658-100364028 (+) // 91.78 // q22.33"]
["11735213_a_at",46.943237,49.693474,42.38462,56.917355,52.22052,51.957676,-0.11427927,-0.032140255,-0.2616558,0.16367197,0.039420128,0.032140255,0.37070072,0.054359898,-1.1602502,-0.21443592,1.1602502,"down","CCDC68",80323.0,"","","","chr18:52568741-52626739 (-) // 87.04 // q21.2"]
["11721319_s_at",309.87616,314.358,317.87653,311.68793,295.43256,317.06897,-0.0145635605,0.0061531067,0.022211075,-0.0061531067,-0.083426476,0.018541336,0.7605416,0.4333848,1.0197953,0.028279591,1.0197953,"up","LYRM4",57128.0,"","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation","","chr6:5108253-5261157 (-) // 83.01 // p25.1"]
["11731475_a_at",6.9685535,7.4901743,8.265845,8.648599,8.474894,7.49635,-0.1758163,-0.071676254,0.07048702,0.13579082,0.1065197,-0.07048726,0.66587454,0.29319307,-1.0839335,-0.11627621,1.0839335,"down","SFRP4",6424.0,"0001944 // vasculature development // not recorded /// 0002092 // positive regulation of receptor internalization // inferred from direct assay /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007409 // axonogenesis // not recorded /// 0007420 // brain development // not recorded /// 0007565 // female pregnancy // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0008406 // gonad development // not recorded /// 0009725 // response to hormone stimulus // non-traceable author statement /// 0009790 // embryo development // not recorded /// 0010628 // positive regulation of gene expression // inferred from direct assay /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0022601 // menstrual cycle phase // non-traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0032355 // response to estradiol stimulus // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0043434 // response to peptide hormone stimulus // inferred from electronic annotation /// 0045606 // positive regulation of epidermal cell differentiation // inferred from direct assay /// 0046329 // negative regulation of JNK cascade // not recorded /// 0046329 // negative regulation of JNK cascade // inferred from electronic annotation /// 0046697 // decidualization // not recorded /// 0046697 // decidualization // inferred from electronic annotation /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation /// 0055062 // phosphate ion homeostasis // inferred from direct assay /// 0060056 // mammary gland involution // not recorded /// 0060056 // mammary gland involution // inferred from electronic annotation /// 0060429 // epithelium development // not recorded /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from direct assay /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from mutant phenotype /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from electronic annotation /// 0090263 // positive regulation of canonical Wnt receptor signaling pathway // inferred from genetic interaction /// 2000119 // negative regulation of sodium-dependent phosphate transport // inferred from direct assay","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0032589 // neuron projection membrane // not recorded","0017147 // Wnt-protein binding // not recorded /// 0017147 // Wnt-protein binding // inferred from electronic annotation /// 0030165 // PDZ domain binding // not recorded /// 0042813 // Wnt-activated receptor activity // not recorded","chr7:37945531-37956717 (-) // 87.37 // p14.1"]
["11728862_at",83.19526,81.576324,94.5001,75.6669,85.76162,91.948135,-0.021915436,-0.050266743,0.16189861,-0.15875483,0.021915436,0.122403145,0.9171907,0.75920993,1.0243562,0.034717537,1.0243562,"up","DCAF17",80067.0,"0016567 // protein ubiquitination // inferred by curator /// 0016567 // protein ubiquitination // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0080008 // CUL4-RING ubiquitin ligase complex // inferred from direct assay","","chr2:172290760-172341360 (+) // 78.07 // q31.1"]
["11760954_x_at",29.530207,33.91123,33.885883,30.246243,30.79415,34.775307,-0.12947893,0.07009268,0.06901407,-0.09491444,-0.06901407,0.10639286,0.939924,0.8190345,1.0156391,0.022387795,1.0156391,"up","EIF3G",8666.0,"0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred by curator /// 0006413 // translational initiation // inferred from direct assay /// 0006413 // translational initiation // traceable author statement /// 0006413 // translational initiation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005852 // eukaryotic translation initiation factor 3 complex // inferred from direct assay /// 0005852 // eukaryotic translation initiation factor 3 complex // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003743 // translation initiation factor activity // inferred by curator /// 0003743 // translation initiation factor activity // inferred from direct assay /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr19:10228701-10230578 (-) // 63.25 // p13.2"]
["11753188_a_at",9.76572,12.560014,10.904405,12.328332,11.332795,12.906299,-0.27544212,0.08759737,-0.11632967,0.060736895,-0.060736895,0.12683463,0.66500944,0.29227233,-1.1047115,-0.1436697,1.1047115,"down","DOC2A",8448.0,"0006810 // transport // inferred from electronic annotation /// 0006887 // exocytosis // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007399 // nervous system development // traceable author statement /// 0016079 // synaptic vesicle exocytosis // inferred from electronic annotation /// 0017158 // regulation of calcium ion-dependent exocytosis // inferred from mutant phenotype /// 0017158 // regulation of calcium ion-dependent exocytosis // inferred from electronic annotation","0005764 // lysosome // inferred from electronic annotation /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030672 // synaptic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation /// 0005488 // binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005544 // calcium-dependent phospholipid binding // inferred from electronic annotation","chr16:30017439-30022348 (-) // 92.12 // p11.2"]
["11753941_x_at",145.89769,145.99634,155.63312,153.87485,165.12628,151.54073,-0.06577492,-0.06479931,0.02741766,0.011025906,0.11283827,-0.011025906,0.60380524,0.21639104,-1.0511717,-0.07199828,1.0511717,"down","SFR1",119392.0,"0000724 // double-strand break repair via homologous recombination // inferred from mutant phenotype /// 0000724 // double-strand break repair via homologous recombination // inferred from electronic annotation /// 0006281 // DNA repair // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0032798 // Swi5-Sfr1 complex // inferred from direct assay /// 0032798 // Swi5-Sfr1 complex // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr10:105881938-105886138 (+) // 82.97 // q25.1"]
["11760185_s_at",25.619774,29.734941,31.233866,25.686045,37.41505,26.74284,-0.13839817,0.07650328,0.14745522,-0.13467121,0.4079628,-0.07650328,0.9526684,0.8564903,-1.0260322,-0.03707602,1.0260322,"down","ARRB1",408.0,"0002031 // G-protein coupled receptor internalization // inferred from mutant phenotype /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0006810 // transport // inferred from electronic annotation /// 0006892 // post-Golgi vesicle-mediated transport // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007219 // Notch signaling pathway // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0009968 // negative regulation of signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016044 // cellular membrane organization // traceable author statement /// 0016567 // protein ubiquitination // inferred from mutant phenotype /// 0030168 // platelet activation // traceable author statement /// 0031397 // negative regulation of protein ubiquitination // inferred from direct assay /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0032715 // negative regulation of interleukin-6 production // inferred from direct assay /// 0032717 // negative regulation of interleukin-8 production // inferred from direct assay /// 0035025 // positive regulation of Rho protein signal transduction // inferred from mutant phenotype /// 0035066 // positive regulation of histone acetylation // inferred from mutant phenotype /// 0043086 // negative regulation of catalytic activity // traceable author statement /// 0043149 // stress fiber assembly // inferred from mutant phenotype /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from mutant phenotype /// 0043547 // positive regulation of GTPase activity // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from direct assay /// 0090240 // positive regulation of histone H4 acetylation // inferred from mutant phenotype","0000139 // Golgi membrane // traceable author statement /// 0000785 // chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005765 // lysosomal membrane // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005834 // heterotrimeric G-protein complex // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005905 // coated pit // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // traceable author statement /// 0031143 // pseudopodium // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from direct assay /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0004402 // histone acetyltransferase activity // inferred from direct assay /// 0004857 // enzyme inhibitor activity // traceable author statement /// 0005096 // GTPase activator activity // inferred from mutant phenotype /// 0005159 // insulin-like growth factor receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0031701 // angiotensin receptor binding // inferred from physical interaction /// 0044212 // transcription regulatory region DNA binding // inferred from mutant phenotype","chr11:74973500-74975376 (-) // 74.59 // q13.4"]
["11721355_a_at",59.80693,55.79026,56.87414,70.57478,65.5108,65.90864,-0.06571007,-0.16600943,-0.13824987,0.17313004,0.065710545,0.07444477,0.17878897,0.007525808,-1.1710085,-0.22775151,1.1710085,"down","YPEL3",83719.0,"","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation","","chr16:30103634-30107521 (-) // 86.37 // p11.2"]
["11715910_a_at",95.02978,93.72454,98.15514,100.62842,106.32331,106.12168,-0.06463528,-0.08458805,-0.017951012,0.017951488,0.097370625,0.094632626,0.24955034,0.018337566,-1.0910443,-0.12570968,1.0910443,"down","MYO6",4646.0,"0006605 // protein targeting // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from sequence or structural similarity /// 0006897 // endocytosis // inferred from mutant phenotype /// 0006897 // endocytosis // inferred from sequence or structural similarity /// 0006897 // endocytosis // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007268 // synaptic transmission // inferred from electronic annotation /// 0007416 // synapse assembly // inferred from electronic annotation /// 0007605 // sensory perception of sound // inferred from electronic annotation /// 0007605 // sensory perception of sound // inferred from direct assay /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0014047 // glutamate secretion // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016358 // dendrite development // inferred from electronic annotation /// 0030048 // actin filament-based movement // inferred from sequence or structural similarity /// 0030048 // actin filament-based movement // non-traceable author statement /// 0030330 // DNA damage response, signal transduction by p53 class mediator // inferred from direct assay /// 0042472 // inner ear morphogenesis // inferred from electronic annotation /// 0042491 // auditory receptor cell differentiation // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0048167 // regulation of synaptic plasticity // inferred from electronic annotation /// 0048839 // inner ear development // inferred from electronic annotation /// 0051046 // regulation of secretion // inferred from mutant phenotype /// 0071257 // cellular response to electrical stimulus // inferred from electronic annotation","0001726 // ruffle // inferred from direct assay /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005902 // microvillus // inferred from electronic annotation /// 0005905 // coated pit // inferred from electronic annotation /// 0005938 // cell cortex // inferred from sequence or structural similarity /// 0012506 // vesicle membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from direct assay /// 0016459 // myosin complex // inferred from electronic annotation /// 0016461 // unconventional myosin complex // traceable author statement /// 0016461 // unconventional myosin complex // non-traceable author statement /// 0016591 // DNA-directed RNA polymerase II, holoenzyme // inferred from direct assay /// 0030139 // endocytic vesicle // inferred from sequence or structural similarity /// 0030139 // endocytic vesicle // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030665 // clathrin coated vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031941 // filamentous actin // inferred from direct assay /// 0031941 // filamentous actin // inferred from sequence or structural similarity /// 0031965 // nuclear membrane // inferred from direct assay /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from electronic annotation /// 0045334 // clathrin-coated endocytic vesicle // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003774 // motor activity // inferred from sequence or structural similarity /// 0003774 // motor activity // inferred from electronic annotation /// 0003779 // actin binding // traceable author statement /// 0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from sequence or structural similarity /// 0005516 // calmodulin binding // traceable author statement /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0043531 // ADP binding // inferred from sequence or structural similarity /// 0051015 // actin filament binding // inferred from direct assay /// 0051015 // actin filament binding // inferred from sequence or structural similarity /// 0060001 // minus-end directed microfilament motor activity // non-traceable author statement","chr6:76458892-76629254 (+) // 91.39 // q14.1"]
["11742547_at",12.618621,11.781265,12.106221,11.473963,13.23462,11.119725,0.079432726,-0.019627094,0.019627094,-0.057757854,0.14819527,-0.10300064,0.90422934,0.728948,1.0214831,0.030665284,1.0214831,"up","SDR16C6P",442388.0,"","","","chr8:57285626-57307924 (-) // 100.0 // q12.1"]
["11742130_a_at",16.779173,17.586569,16.603245,17.55497,16.671234,16.743185,0.0015487671,0.0693512,-0.01365757,0.066756725,-0.0077619553,-0.0015487671,0.99963343,0.9985432,-1.0000471,-6.793155E-5,1.0000471,"down","HTR4",3360.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007187 // G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger // traceable author statement /// 0007210 // serotonin receptor signaling pathway // inferred from direct assay /// 0007210 // serotonin receptor signaling pathway // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype","0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004993 // serotonin receptor activity // inferred from direct assay /// 0004993 // serotonin receptor activity // traceable author statement","chr5:147830594-148033741 (-) // 100.0 // q32"]
["11746164_a_at",333.57324,313.97586,333.77155,312.37396,294.8919,305.01312,0.09103966,0.003689766,0.09189701,-0.003689766,-0.08677769,-0.038092613,0.3605748,0.050260045,1.0755408,0.105062224,1.0755408,"up","MEAF6",64769.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0043968 // histone H2A acetylation // inferred from direct assay /// 0043981 // histone H4-K5 acetylation // inferred from direct assay /// 0043982 // histone H4-K8 acetylation // inferred from direct assay /// 0043983 // histone H4-K12 acetylation // inferred from direct assay /// 0043984 // histone H4-K16 acetylation // inferred from direct assay /// 0044154 // histone H3-K14 acetylation // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0035267 // NuA4 histone acetyltransferase complex // inferred from direct assay /// 0070776 // MOZ/MORF histone acetyltransferase complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr1:37962146-37980334 (-) // 89.81 // p34.3"]
["11740730_a_at",163.3362,162.45432,169.15239,149.50348,158.43329,163.87706,0.0039048195,-0.0039052963,0.05438471,-0.1237607,-0.04006338,0.008674145,0.56278706,0.17779793,1.0496037,0.06984471,1.0496037,"up","C10orf125",282969.0,"0005996 // monosaccharide metabolic process // inferred from electronic annotation /// 0006004 // fucose metabolic process // inferred from sequence or structural similarity /// 0006004 // fucose metabolic process // inferred from electronic annotation","","0016853 // isomerase activity // inferred from electronic annotation /// 0016857 // racemase and epimerase activity, acting on carbohydrates and derivatives // inferred from sequence or structural similarity /// 0016857 // racemase and epimerase activity, acting on carbohydrates and derivatives // inferred from electronic annotation /// 0042806 // fucose binding // inferred from sequence or structural similarity /// 0042806 // fucose binding // inferred from electronic annotation /// 0048029 // monosaccharide binding // inferred from electronic annotation","chr10:135168577-135171529 (-) // 98.24 // q26.3"]
["11754670_x_at",202.3532,209.77104,205.81271,203.0164,191.60896,199.8011,-0.002360344,0.049580097,0.022096157,0.002360344,-0.08107138,-0.020671368,0.49821153,0.124994926,1.0397472,0.05623285,1.0397472,"up","MIR4647 /// SLC35B2","100616124 /// 347734","0006810 // transport // inferred from electronic annotation /// 0007165 // signal transduction // inferred from mutant phenotype /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from mutant phenotype /// 0046963 // 3'-phosphoadenosine 5'-phosphosulfate transport // inferred from direct assay /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0000139 // Golgi membrane // traceable author statement /// 0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from mutant phenotype /// 0046964 // 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity // inferred from direct assay","chr6:44221842-44225265 (-) // 95.31 // p21.1"]
["11719738_at",190.75981,193.03346,197.0552,209.03035,207.77054,216.425,-0.085038185,-0.06794453,-0.03819561,0.046916485,0.03819561,0.09707165,0.16168956,0.0055520353,-1.0900952,-0.12445408,1.0900952,"down","DCP2",167227.0,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // inferred from mutant phenotype /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // inferred from electronic annotation /// 0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0043928 // exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay // traceable author statement /// 0071044 // histone mRNA catabolic process // inferred from mutant phenotype","0000932 // cytoplasmic mRNA processing body // inferred from direct assay /// 0000932 // cytoplasmic mRNA processing body // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016442 // RNA-induced silencing complex // inferred from direct assay","0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016896 // exoribonuclease activity, producing 5'-phosphomonoesters // traceable author statement /// 0030145 // manganese ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr5:112312398-112356761 (+) // 96.56 // q22.2"]
["11717782_s_at",821.70026,806.5534,867.9872,843.43933,819.97534,822.6144,-8.020401E-4,-0.027644157,0.07825947,0.036870003,-0.0038337708,8.020401E-4,0.962404,0.88411576,1.0036979,0.005325062,1.0036979,"up","PHF5A",84844.0,"0000398 // nuclear mRNA splicing, via spliceosome // inferred from direct assay /// 0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005686 // U2 snRNP // inferred from direct assay /// 0005689 // U12-type spliceosomal complex // inferred from direct assay /// 0016363 // nuclear matrix // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from sequence or structural similarity /// 0016607 // nuclear speck // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from sequence or structural similarity /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation","chr22:41855720-41864691 (-) // 94.32 // q13.2"]
["11742862_a_at",8.116542,6.6450214,6.6206813,6.5468173,8.828296,7.9159102,0.1623509,-0.12624049,-0.13153481,-0.14772058,0.28362083,0.12624073,0.7951993,0.4953917,-1.0861237,-0.11918843,1.0861237,"down","GPR116",221395.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007218 // neuropeptide signaling pathway // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement","chr6:46820246-46889742 (-) // 98.41 // p12.3"]
["AFFX-r2-TagA_at",8.781211,8.574783,8.091153,8.09801,10.276814,7.526172,0.07558632,0.04126644,-0.042488337,-0.041266203,0.3024876,-0.14691734,0.97793645,0.9288763,-1.0092707,-0.0133131305,1.0092707,"down",-0.041266203,0.3024876,-0.14691734,0.07558632,0.04126644,-0.042488337]
["11761923_a_at",9.799223,10.014988,10.757891,9.90918,9.90918,10.441164,-0.023759842,0.007661581,0.11089611,-0.007661581,-0.007661581,0.067783356,0.9270871,0.7825858,1.0098301,0.01411261,1.0098301,"up","RXFP1",59350.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from direct assay /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007188 // adenylate cyclase-modulating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007189 // adenylate cyclase-activating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007567 // parturition // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0060427 // lung connective tissue development // inferred from electronic annotation /// 0060658 // nipple morphogenesis // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from direct assay /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0042562 // hormone binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr4:159443042-159573932 (+) // 94.14 // q32.1"]
["11731386_a_at",9.313145,8.621452,7.567931,8.560574,9.199389,8.560574,0.11644912,0.0051116943,-0.18292022,-0.0051116943,0.09871912,-0.0051116943,0.8579371,0.6231616,-1.0352303,-0.049951717,1.0352303,"down","HYAL4",23553.0,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006027 // glycosaminoglycan catabolic process // traceable author statement /// 0007342 // fusion of sperm to egg plasma membrane // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004415 // hyalurononglucosaminidase activity // inferred from electronic annotation /// 0004415 // hyalurononglucosaminidase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity, acting on glycosyl bonds // inferred from electronic annotation","chr7:123488141-123517534 (+) // 76.94 // q31.32"]
["11759795_at",6.11143,5.3176737,6.155205,6.359163,5.705883,6.6523995,-0.005148411,-0.20586324,0.005148411,0.052178383,-0.10420823,0.11721635,0.7369193,0.39567563,-1.0646284,-0.090349905,1.0646284,"down","SLC22A2",6582.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007269 // neurotransmitter secretion // traceable author statement /// 0007589 // body fluid secretion // traceable author statement /// 0015695 // organic cation transport // inferred from direct assay /// 0015695 // organic cation transport // inferred from electronic annotation /// 0015695 // organic cation transport // traceable author statement /// 0034220 // ion transmembrane transport // inferred from electronic annotation /// 0042136 // neurotransmitter biosynthetic process // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation /// 0015075 // ion transmembrane transporter activity // inferred from electronic annotation /// 0015101 // organic cation transmembrane transporter activity // inferred from direct assay /// 0015101 // organic cation transmembrane transporter activity // inferred from electronic annotation /// 0015101 // organic cation transmembrane transporter activity // traceable author statement /// 0022857 // transmembrane transporter activity // inferred from electronic annotation","chr6:160670129-160680042 (-) // 96.55 // q25.3"]
["11728168_a_at",11.330385,11.436037,10.682964,10.651969,9.844633,10.25447,0.08698082,0.10037112,0.0020959377,-0.0020959377,-0.11580658,-0.056963205,0.37009066,0.054163083,1.0878185,0.12143787,1.0878185,"up","KAZN",23254.0,"0031424 // keratinization // inferred from electronic annotation","0001533 // cornified envelope // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030057 // desmosome // inferred from direct assay /// 0030057 // desmosome // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","","chr1:14925183-15444539 (+) // 93.8 // p36.21"]
["11756714_a_at",681.9007,689.27325,708.3736,643.3739,654.6984,643.0741,0.02936554,0.044879913,0.08431435,-0.054538727,-0.02936554,-0.055211067,0.1633772,0.005759272,1.0711979,0.09922499,1.0711979,"up","PPP2R2A",5520.0,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006470 // protein dephosphorylation // inferred from direct assay /// 0007165 // signal transduction // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement","0000159 // protein phosphatase type 2A complex // inferred from direct assay /// 0000159 // protein phosphatase type 2A complex // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0004722 // protein serine/threonine phosphatase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008601 // protein phosphatase type 2A regulator activity // traceable author statement /// 0008601 // protein phosphatase type 2A regulator activity // inferred from electronic annotation","chr8:26222914-26228582 (+) // 99.02 // p21.2"]
["11761194_at",10.295025,8.915891,8.729986,9.192587,10.893462,10.104967,0.09514356,-0.11235285,-0.14275241,-0.06826091,0.17665887,0.06826091,0.69811964,0.33720154,-1.0808804,-0.1122069,1.0808804,"down","TGOLN2",10618.0,"","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005802 // trans-Golgi network // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030133 // transport vesicle // traceable author statement","0005515 // protein binding // inferred from physical interaction","chr2:85551366-85555093 (-) // 61.38 // p11.2"]
["11733784_at",244.28955,246.2901,250.58542,244.21867,241.71542,247.06505,-0.00588274,0.005883217,0.030827045,-0.00630188,-0.021165848,0.010415554,0.68766046,0.32255098,1.011124,0.015959956,1.011124,"up","PPP2R1B",5519.0,"0006886 // intracellular protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 2001241 // positive regulation of extrinsic apoptotic signaling pathway in absence of ligand // inferred from mutant phenotype","0030117 // membrane coat // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr11:111608604-111637169 (-) // 92.01 // q23.1"]
["11730337_at",51.64832,53.94219,47.3094,47.692097,52.96008,49.584106,0.029421806,0.09211445,-0.09717274,-0.085549355,0.06560564,-0.029421806,0.91186255,0.7467752,1.0171809,0.024576304,1.0171809,"up","SMAD6",4091.0,"0001657 // ureteric bud development // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006955 // immune response // inferred from mutant phenotype /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0007352 // zygotic specification of dorsal/ventral axis // inferred from mutant phenotype /// 0010991 // negative regulation of SMAD protein complex assembly // inferred from direct assay /// 0030509 // BMP signaling pathway // traceable author statement /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // inferred from mutant phenotype /// 0030514 // negative regulation of BMP signaling pathway // inferred from direct assay /// 0031589 // cell-substrate adhesion // inferred from mutant phenotype /// 0034616 // response to laminar fluid shear stress // inferred from expression pattern /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from mutant phenotype /// 0043627 // response to estrogen stimulus // inferred from electronic annotation /// 0045750 // positive regulation of S phase of mitotic cell cycle // inferred from mutant phenotype /// 0060394 // negative regulation of pathway-restricted SMAD protein phosphorylation // inferred from direct assay /// 0060394 // negative regulation of pathway-restricted SMAD protein phosphorylation // inferred from mutant phenotype","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement","0003682 // chromatin binding // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0030617 // transforming growth factor beta receptor, inhibitory cytoplasmic mediator activity // inferred from direct assay /// 0030617 // transforming growth factor beta receptor, inhibitory cytoplasmic mediator activity // inferred from mutant phenotype /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0034713 // type I transforming growth factor beta receptor binding // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0070410 // co-SMAD binding // inferred from physical interaction /// 0070411 // I-SMAD binding // inferred from physical interaction /// 0070412 // R-SMAD binding // inferred from physical interaction /// 0070698 // type I activin receptor binding // inferred from direct assay","chr15:66994545-67074326 (+) // 92.25 // q22.31"]
["11761735_a_at",28.736546,26.992159,34.120636,25.133038,29.11332,23.29175,0.04517317,-0.04517317,0.29293108,-0.14812851,0.0639658,-0.25789452,0.58689857,0.20075646,1.158022,0.21166271,1.158022,"up","RXRB",6257.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0030522 // intracellular receptor mediated signaling pathway // inferred from direct assay /// 0043401 // steroid hormone mediated signaling pathway // inferred from electronic annotation /// 0048384 // retinoic acid receptor signaling pathway // inferred from electronic annotation /// 0055012 // ventricular cardiac muscle cell differentiation // inferred from electronic annotation /// 0060038 // cardiac muscle cell proliferation // inferred from electronic annotation /// 0071300 // cellular response to retinoic acid // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003707 // steroid hormone receptor activity // inferred from electronic annotation /// 0003713 // transcription coactivator activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0004879 // ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from direct assay /// 0004886 // 9-cis retinoic acid receptor activity // inferred from electronic annotation /// 0004886 // 9-cis retinoic acid receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0030375 // thyroid hormone receptor coactivator activity // inferred from electronic annotation /// 0042809 // vitamin D receptor binding // inferred from electronic annotation /// 0042974 // retinoic acid receptor binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046966 // thyroid hormone receptor binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr6:33163387-33168439 (-) // 97.45 // p21.32"]
["11740151_at",7.2253017,6.7920556,7.3906665,7.8358884,7.215608,8.206928,-0.016323328,-0.105532885,0.016323328,0.1007154,-0.01826024,0.1674614,0.52369004,0.14424138,-1.0855929,-0.11848314,1.0855929,"down","CYP7B1",9420.0,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0006699 // bile acid biosynthetic process // inferred from electronic annotation /// 0006699 // bile acid biosynthetic process // traceable author statement /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0007613 // memory // inferred from electronic annotation /// 0007623 // circadian rhythm // inferred from electronic annotation /// 0008202 // steroid metabolic process // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // inferred from electronic annotation /// 0008206 // bile acid metabolic process // traceable author statement /// 0008219 // cell death // inferred from electronic annotation /// 0033147 // negative regulation of intracellular estrogen receptor signaling pathway // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0050679 // positive regulation of epithelial cell proliferation // inferred from electronic annotation /// 0051591 // response to cAMP // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0060740 // prostate gland epithelium morphogenesis // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0004497 // monooxygenase activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from electronic annotation /// 0008396 // oxysterol 7-alpha-hydroxylase activity // inferred from electronic annotation /// 0008396 // oxysterol 7-alpha-hydroxylase activity // traceable author statement /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016705 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen // inferred from electronic annotation /// 0020037 // heme binding // inferred from electronic annotation /// 0033783 // 25-hydroxycholesterol 7alpha-hydroxylase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:65508158-65711348 (-) // 94.25 // q12.3"]
["11745584_a_at",28.055109,25.39201,28.708569,26.818094,29.338253,23.704084,0.0325284,-0.11136055,0.06574631,-0.0325284,0.097047806,-0.21059942,0.8884772,0.6930464,1.0312052,0.044331413,1.0312052,"up","ZFP57",346171.0,"0006349 // regulation of gene expression by genetic imprinting // inferred from mutant phenotype /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0043045 // DNA methylation involved in embryo development // inferred from mutant phenotype","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:29640168-29644931 (-) // 100.0 // p22.1"]
["11726329_x_at",139.80731,134.20859,158.68362,155.99928,171.18965,154.17082,-0.14959478,-0.20855808,0.0331192,0.008504868,0.14256096,-0.008504868,0.5289729,0.14780614,-1.1140893,-0.1558648,1.1140893,"down","GBP1",2633.0,"0006184 // GTP catabolic process // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement","0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0005525 // GTP binding // traceable author statement","chr1:89517986-89531043 (-) // 99.77 // p22.2"]
["11732089_a_at",9.195173,8.117168,9.470926,7.769706,8.355041,9.295711,0.06911516,-0.110785246,0.11174393,-0.17390132,-0.06911492,0.08480358,0.79495007,0.49496284,1.0541612,0.076095484,1.0541612,"up","ISX",91464.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr22:35462129-35483380 (+) // 85.37 // q12.3"]
["11744103_at",140.37437,142.25026,134.75803,135.37407,138.43956,140.79005,0.010011673,0.029162884,-0.048896313,-0.042316437,-0.010011673,0.014277458,0.9166114,0.7581772,1.0065669,0.009443036,1.0065669,"up","TLCD1",116238.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr17:27051375-27053275 (-) // 91.82 // q11.2"]
["11755659_x_at",132.44203,140.23108,133.66563,135.26575,148.54071,140.36853,-0.056440353,0.026004791,-0.043172836,-0.026004791,0.10905743,0.02741766,0.6392985,0.26050898,-1.0434486,-0.06135949,1.0434486,"down","CTAGE5",4253.0,"0043085 // positive regulation of catalytic activity // traceable author statement","","0008047 // enzyme activator activity // traceable author statement","chr14:39745429-39819849 (+) // 98.63 // q21.1"]
["11735559_s_at",7.090286,6.286454,6.6660995,8.185036,7.083919,6.7519975,0.035912752,-0.13768458,-0.05308819,0.24305773,0.03461671,-0.03461671,0.62752306,0.24467745,-1.0962974,-0.1326392,1.0962974,"down","TBC1D26 /// TBC1D28","254272 /// 353149","0032313 // regulation of Rab GTPase activity // inferred from electronic annotation /// 0032851 // positive regulation of Rab GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005097 // Rab GTPase activator activity // inferred from electronic annotation","chr17:15635560-15652509 (+) // 97.58 // p12 /// chr17:18538838-18547740 (-) // 99.95 // p11.2"]
["11750002_a_at",673.26825,684.36176,704.7077,693.6562,676.11237,663.53564,-0.014829636,0.0087480545,0.051013947,0.028209686,-0.0087480545,-0.035837173,0.79195625,0.48745513,1.0142659,0.02043591,1.0142659,"up","RAB2A",5862.0,"0006184 // GTP catabolic process // inferred from direct assay /// 0006184 // GTP catabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006888 // ER to Golgi vesicle-mediated transport // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005626 // insoluble fraction // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0033116 // endoplasmic reticulum-Golgi intermediate compartment membrane // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from direct assay /// 0003924 // GTPase activity // traceable author statement /// 0005525 // GTP binding // inferred from direct assay /// 0005525 // GTP binding // inferred from electronic annotation /// 0019003 // GDP binding // inferred from direct assay","chr8:61429494-61533547 (+) // 97.83 // q12.1"]
["11741701_x_at",19.423899,20.590275,21.016378,20.605246,21.132135,22.08557,-0.099430084,-0.015299797,0.014251232,-0.014251232,0.022175789,0.08584118,0.6089115,0.2226684,-1.0459024,-0.06474819,1.0459024,"down","HIST1H2BJ",8970.0,"0006334 // nucleosome assembly // non-traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0042742 // defense response to bacterium // inferred from electronic annotation","0000786 // nucleosome // non-traceable author statement /// 0000786 // nucleosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation","chr6:27099769-27100575 (-) // 99.5 // p22.1"]
["11758501_s_at",89.16591,81.31588,85.46846,91.31619,82.19119,90.84909,0.030549526,-0.10240507,-0.030550003,0.06492853,-0.08695841,0.05752945,0.80000144,0.50358224,-1.0323759,-0.045968413,1.0323759,"down","NMNAT1",64802.0,"0006766 // vitamin metabolic process // traceable author statement /// 0006767 // water-soluble vitamin metabolic process // traceable author statement /// 0009058 // biosynthetic process // inferred from electronic annotation /// 0009435 // NAD biosynthetic process // inferred by curator /// 0009435 // NAD biosynthetic process // inferred from electronic annotation /// 0019363 // pyridine nucleotide biosynthetic process // inferred from electronic annotation /// 0019674 // NAD metabolic process // traceable author statement /// 0043526 // neuroprotection // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0000309 // nicotinamide-nucleotide adenylyltransferase activity // inferred from direct assay /// 0000309 // nicotinamide-nucleotide adenylyltransferase activity // traceable author statement /// 0000309 // nicotinamide-nucleotide adenylyltransferase activity // inferred from electronic annotation /// 0004515 // nicotinate-nucleotide adenylyltransferase activity // inferred from direct assay /// 0004515 // nicotinate-nucleotide adenylyltransferase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016779 // nucleotidyltransferase activity // inferred from electronic annotation","chr1:10045103-10045555 (+) // 72.25 // p36.22"]
["11741238_a_at",1259.7806,1277.4471,1237.6265,1233.5549,1227.322,1251.373,0.01762867,0.037719727,-0.007967949,-0.012722015,-0.020030022,0.007967949,0.5854162,0.19921573,1.0168133,0.024054775,1.0168133,"up","COPE",11316.0,"0006810 // transport // inferred from electronic annotation /// 0006890 // retrograde vesicle-mediated transport, Golgi to ER // traceable author statement /// 0006890 // retrograde vesicle-mediated transport, Golgi to ER // inferred from electronic annotation /// 0006891 // intra-Golgi vesicle-mediated transport // inferred from sequence or structural similarity /// 0015031 // protein transport // inferred from electronic annotation /// 0016044 // cellular membrane organization // traceable author statement /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0048205 // COPI coating of Golgi vesicle // traceable author statement","0000139 // Golgi membrane // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030126 // COPI vesicle coat // inferred from sequence or structural similarity /// 0030126 // COPI vesicle coat // inferred from electronic annotation /// 0030137 // COPI-coated vesicle // inferred from electronic annotation /// 0030663 // COPI coated vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0005198 // structural molecule activity // inferred from electronic annotation","chr19:19010322-19030199 (-) // 99.8 // p13.11"]
["11741658_s_at",310.19464,306.0207,298.65118,297.8031,287.1132,293.20706,0.05676365,0.037219048,0.0020513535,-0.0020513535,-0.054790497,-0.024490356,0.37466764,0.055713836,1.0418316,0.05912212,1.0418316,"up","SYDE1",85360.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0032862 // activation of Rho GTPase activity // inferred from sequence or structural similarity /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005100 // Rho GTPase activator activity // inferred from sequence or structural similarity","chr19:15218213-15225789 (+) // 99.85 // p13.12"]
["11747174_x_at",11.051055,11.150012,12.045335,10.722111,10.478013,12.395591,-0.006430626,0.006430626,0.11785984,-0.0500257,-0.08324933,0.15921235,0.90860564,0.73828876,1.0214658,0.03064087,1.0214658,"up","ERO1LB",56605.0,"0006457 // protein folding // traceable author statement /// 0006467 // protein thiol-disulfide exchange // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0022900 // electron transport chain // inferred from electronic annotation /// 0055114 // oxidation-reduction process // non-traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005783 // endoplasmic reticulum // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0016491 // oxidoreductase activity // non-traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016671 // oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor // inferred from electronic annotation /// 0050660 // flavin adenine dinucleotide binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // non-traceable author statement","chr1:236393410-236445319 (-) // 79.3 // q42.3"]
["11731170_s_at",12.550596,10.514523,10.188258,11.306015,13.058926,12.134039,0.09968066,-0.15569186,-0.20116782,-0.05098462,0.15696096,0.05098462,0.6569549,0.28235164,-1.1004142,-0.1380466,1.1004142,"down","DEFB126",81623.0,"0006952 // defense response // inferred from electronic annotation /// 0042742 // defense response to bacterium // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0030112 // glycocalyx // inferred from electronic annotation","","chr20:123009-126392 (+) // 91.23 // p13"]
["11745460_at",165.2407,158.83905,164.53278,164.20737,171.54071,172.91205,0.0030970573,-0.05390644,-0.0030970573,-0.005953312,0.05707884,0.068565845,0.4919822,0.120142855,-1.0409249,-0.057865996,1.0409249,"down","NDUFV3",4731.0,"0006120 // mitochondrial electron transport, NADH to ubiquinone // non-traceable author statement /// 0006120 // mitochondrial electron transport, NADH to ubiquinone // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0022900 // electron transport chain // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005747 // mitochondrial respiratory chain complex I // inferred from direct assay /// 0005747 // mitochondrial respiratory chain complex I // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0070469 // respiratory chain // inferred from electronic annotation","0008137 // NADH dehydrogenase (ubiquinone) activity // non-traceable author statement /// 0008137 // NADH dehydrogenase (ubiquinone) activity // traceable author statement","chr21:44317034-44329779 (+) // 60.52 // q22.3"]
["11721883_at",185.23907,180.10231,185.69238,181.77826,176.25043,173.3846,0.033890247,-0.0066809654,0.037416458,0.0066809654,-0.03787136,-0.061522484,0.45676315,0.098954014,1.0370218,0.05244616,1.0370218,"up","TUBGCP3",10426.0,"0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000226 // microtubule cytoskeleton organization // inferred from electronic annotation /// 0000278 // mitotic cell cycle // traceable author statement /// 0007020 // microtubule nucleation // non-traceable author statement /// 0007020 // microtubule nucleation // inferred from electronic annotation /// 0007338 // single fertilization // non-traceable author statement","0000922 // spindle pole // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005813 // centrosome // non-traceable author statement /// 0005814 // centriole // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // non-traceable author statement /// 0005827 // polar microtubule // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation","0005198 // structural molecule activity // non-traceable author statement /// 0005200 // structural constituent of cytoskeleton // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0043015 // gamma-tubulin binding // inferred from direct assay","chr13:113139322-113242499 (-) // 99.44 // q34"]
["11750603_x_at",99.70735,101.25243,80.66502,98.70733,98.95493,105.55432,0.005464554,0.027648926,-0.3002925,-0.009078503,-0.005464077,0.08767843,0.7155781,0.36243206,-1.0818033,-0.113438234,1.0818033,"down","PLEKHG5",57449.0,"0006915 // apoptotic process // traceable author statement /// 0007165 // signal transduction // inferred from mutant phenotype /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0008219 // cell death // inferred from electronic annotation /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from mutant phenotype /// 0043542 // endothelial cell migration // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0004871 // signal transducer activity // inferred from mutant phenotype /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation","chr1:6527564-6557156 (-) // 98.02 // p36.31"]
["11735603_a_at",41.554287,44.343132,44.298042,45.747265,46.96447,43.2368,-0.09297943,7.338524E-4,-7.338524E-4,0.045708656,0.08359289,-0.03571701,0.6352475,0.25550404,-1.044048,-0.062187973,1.044048,"down","OSBPL7",114881.0,"0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // inferred from electronic annotation","","0005543 // phospholipid binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation","chr17:45884737-45899147 (-) // 99.32 // q21.32"]
["11742072_a_at",60.633305,63.94137,63.075577,48.609425,55.087162,52.6332,0.0691967,0.14583635,0.12616825,-0.24967718,-0.0691967,-0.13494015,0.19726388,0.009980364,1.2016402,0.26500505,1.2016402,"up","PBX3",5090.0,"0002087 // regulation of respiratory gaseous exchange by neurological system process // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007387 // anterior compartment pattern formation // traceable author statement /// 0007388 // posterior compartment specification // traceable author statement /// 0007585 // respiratory gaseous exchange // inferred from electronic annotation /// 0008344 // adult locomotory behavior // inferred from electronic annotation /// 0021516 // dorsal spinal cord development // inferred from electronic annotation /// 0048666 // neuron development // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr9:128510477-128729653 (+) // 98.62 // q33.3"]
["11760569_at",8.043875,7.6889377,7.415257,10.60038,8.384757,8.527239,-0.029939413,-0.095045805,-0.14733338,0.36821437,0.029939175,0.05424905,0.46098748,0.10166661,-1.1822816,-0.24157372,1.1822816,"down","EPGN",255324.0,"0000165 // MAPK cascade // inferred from sequence or structural similarity /// 0000187 // activation of MAPK activity // inferred from sequence or structural similarity /// 0001525 // angiogenesis // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0043406 // positive regulation of MAP kinase activity // inferred from direct assay /// 0045741 // positive regulation of epidermal growth factor-activated receptor activity // inferred from direct assay /// 0045840 // positive regulation of mitosis // inferred from direct assay /// 0050679 // positive regulation of epithelial cell proliferation // inferred from sequence or structural similarity","0005576 // extracellular region // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004708 // MAP kinase kinase activity // inferred from sequence or structural similarity /// 0005154 // epidermal growth factor receptor binding // inferred from direct assay /// 0008083 // growth factor activity // inferred from direct assay /// 0008083 // growth factor activity // inferred from electronic annotation","chr4:75174189-75181669 (+) // 84.58 // q13.3"]
["200028_PM_s_at",1304.4276,1297.7389,1362.4948,1273.6655,1238.5939,1216.4519,0.020923615,0.013506889,0.0837574,-0.013506889,-0.053790092,-0.07981396,0.33285198,0.039919533,1.0632147,0.0884329,1.0632147,"up","STARD7",56910.0,"","0005739 // mitochondrion // inferred from electronic annotation","","chr2:96850604-96874508 (-) // 95.78 // q11.2"]
["11747403_a_at",7.028346,7.936154,6.9685545,7.8923736,7.101825,9.087598,-0.09113932,0.084115505,-0.10346508,0.07613468,-0.07613468,0.2795744,0.698541,0.33783674,-1.0943097,-0.13002108,1.0943097,"down","PTPN5",84867.0,"0006470 // protein dephosphorylation // traceable author statement /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // traceable author statement /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0001784 // phosphotyrosine binding // inferred from direct assay /// 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // traceable author statement /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation","chr11:18749482-18813348 (-) // 92.56 // p15.1"]
["11738783_at",11.116203,10.489925,12.74608,10.20293,11.815289,12.615,-0.04399538,-0.12765527,0.15339398,-0.16767597,0.04399562,0.13848066,0.97951907,0.93293446,-1.0076671,-0.011019048,1.0076671,"down","HIST1H3A /// HIST1H3B /// HIST1H3C /// HIST1H3D /// HIST1H3E /// HIST1H3F /// HIST1H3G /// HIST1H3H /// HIST1H3I /// HIST1H3J","8350 /// 8351 /// 8352 /// 8353 /// 8354 /// 8355 /// 8356 /// 8357 /// 8358 /// 8968","0006334 // nucleosome assembly // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0051320 // S phase // non-traceable author statement /// 0060968 // regulation of gene silencing // inferred from direct assay","0000786 // nucleosome // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr6:26045611-26046166 (+) // 99.28 // p22.2"]
["11732246_a_at",320.4191,329.1352,317.1063,351.16357,341.17987,337.6071,-0.057052612,-0.018332481,-0.07204628,0.07513046,0.033519745,0.018332481,0.24410093,0.017237049,-1.0654563,-0.09147138,1.0654563,"down","HNRNPC /// LOC100652761 /// LOC100653343","100652761 /// 100653343 /// 3183","0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from direct assay /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0045120 // pronucleus // inferred from electronic annotation /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // non-traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0003729 // mRNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction","chr14:21677305-21737638 (-) // 95.15 // q11.2"]
["11753709_x_at",25.238089,24.56611,21.814322,29.172615,23.937143,22.384296,0.05764246,0.018709183,-0.15268469,0.2666545,-0.018709183,-0.11547327,0.85896283,0.6249848,-1.0494269,-0.06960169,1.0494269,"down","CIDEC",63924.0,"0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005925 // focal adhesion // inferred from direct assay","","chr3:9908746-9920172 (-) // 99.77 // p25.3"]
["11733352_a_at",46.698624,48.11299,46.53944,44.007534,39.27883,46.12045,0.011449814,0.05449629,0.006523609,-0.07417965,-0.23817825,-0.006523609,0.5151487,0.13768537,1.0946354,0.13045037,1.0946354,"up","NF2",4771.0,"0001707 // mesoderm formation // inferred from electronic annotation /// 0001953 // negative regulation of cell-matrix adhesion // traceable author statement /// 0006469 // negative regulation of protein kinase activity // inferred from electronic annotation /// 0007398 // ectoderm development // inferred from electronic annotation /// 0008156 // negative regulation of DNA replication // inferred from mutant phenotype /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0014010 // Schwann cell proliferation // inferred from mutant phenotype /// 0022408 // negative regulation of cell-cell adhesion // inferred from direct assay /// 0030036 // actin cytoskeleton organization // inferred from mutant phenotype /// 0030336 // negative regulation of cell migration // traceable author statement /// 0035330 // regulation of hippo signaling cascade // inferred from mutant phenotype /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042475 // odontogenesis of dentin-containing tooth // inferred from electronic annotation /// 0042518 // negative regulation of tyrosine phosphorylation of Stat3 protein // inferred from direct assay /// 0042524 // negative regulation of tyrosine phosphorylation of Stat5 protein // inferred from direct assay /// 0043409 // negative regulation of MAPK cascade // inferred from electronic annotation /// 0045216 // cell-cell junction organization // inferred from electronic annotation /// 0046426 // negative regulation of JAK-STAT cascade // inferred from direct assay /// 0051496 // positive regulation of stress fiber assembly // inferred from mutant phenotype /// 0070306 // lens fiber cell differentiation // inferred from electronic annotation","0001726 // ruffle // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0005856 // cytoskeleton // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005912 // adherens junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0019898 // extrinsic to membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030175 // filopodium // inferred from electronic annotation /// 0030864 // cortical actin cytoskeleton // inferred from electronic annotation /// 0031527 // filopodium membrane // inferred from electronic annotation /// 0032154 // cleavage furrow // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008092 // cytoskeletal protein binding // inferred from electronic annotation","chr22:29999544-30094583 (+) // 84.95 // q12.2"]
["11723163_s_at",8.79903,7.892372,7.52578,7.7828693,8.237994,7.4483085,0.16696382,0.010078192,-0.058539867,-0.01007843,0.07191205,-0.07346797,0.85267293,0.61170805,1.0305245,0.043378793,1.0305245,"up","NR3C2",4306.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006883 // cellular sodium ion homeostasis // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007588 // excretion // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0031959 // mineralocorticoid receptor signaling pathway // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0043401 // steroid hormone mediated signaling pathway // traceable author statement /// 0043401 // steroid hormone mediated signaling pathway // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003707 // steroid hormone receptor activity // inferred from electronic annotation /// 0003707 // steroid hormone receptor activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0005496 // steroid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation /// 0017082 // mineralocorticoid receptor activity // inferred from electronic annotation /// 0042562 // hormone binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr4:148999914-149363672 (-) // 96.64 // q31.23"]
["11723038_at",105.11665,96.55307,93.786705,97.086105,82.01854,94.83468,0.13555098,0.012953281,-0.028985023,0.020896435,-0.22241831,-0.012953758,0.6604692,0.2869539,1.0802249,0.11133167,1.0802249,"up","SRSF3",6428.0,"0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0031124 // mRNA 3'-end processing // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0016607 // nuclear speck // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0043274 // phospholipase binding // inferred from electronic annotation","chr6:36562089-36572244 (+) // 95.77 // p21.31"]
["11721588_at",31.238047,34.113567,44.668102,40.724903,44.626442,48.901066,-0.44860077,-0.32155943,0.0673399,-0.065993786,0.065993786,0.19796085,0.5414981,0.15745597,-1.2313666,-0.30026037,1.2313666,"down","TRAF1",7185.0,"0006461 // protein complex assembly // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from direct assay /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from reviewed computational analysis /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from direct assay","0005737 // cytoplasm // traceable author statement","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0031996 // thioesterase binding // inferred from physical interaction","chr9:123664431-123691047 (-) // 83.42 // q33.2"]
["11722851_at",90.41504,91.99003,96.451164,97.532455,109.0415,83.37292,-0.059075832,-0.034160614,0.034160137,0.05024433,0.21116686,-0.17605972,0.8906157,0.69873965,-1.0339329,-0.048142593,1.0339329,"down","BIRC3",330.0,"0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // traceable author statement /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0034121 // regulation of toll-like receptor signaling pathway // traceable author statement /// 0038061 // NIK/NF-kappaB cascade // traceable author statement /// 0039535 // regulation of RIG-I signaling pathway // traceable author statement /// 0042326 // negative regulation of phosphorylation // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // traceable author statement /// 0045088 // regulation of innate immune response // traceable author statement /// 0050727 // regulation of inflammatory response // traceable author statement /// 0060546 // negative regulation of necroptosis // inferred from electronic annotation /// 0070266 // necroptosis // inferred from electronic annotation /// 0070424 // regulation of nucleotide-binding oligomerization domain containing signaling pathway // traceable author statement /// 2000116 // regulation of cysteine-type endopeptidase activity // traceable author statement /// 2000378 // negative regulation of reactive oxygen species metabolic process // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:102188127-102209250 (+) // 88.29 // q22.2"]
["11733709_s_at",993.4323,1001.48236,997.5385,1017.16925,1002.32874,1009.4915,-0.012252808,-6.093979E-4,-0.00630188,0.021813393,6.093979E-4,0.010882378,0.39907488,0.066467926,-1.0121968,-0.017489789,1.0121968,"down","TMEM189 /// TMEM189-UBE2V1 /// UBE2V1","387521 /// 387522 /// 7335","0000209 // protein polyubiquitination // traceable author statement /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0006282 // regulation of DNA repair // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0008063 // Toll signaling pathway // traceable author statement /// 0030154 // cell differentiation // non-traceable author statement /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from mutant phenotype /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045893 // positive regulation of transcription, DNA-dependent // traceable author statement /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from mutant phenotype /// 0070423 // nucleotide-binding oligomerization domain containing signaling pathway // traceable author statement /// 0070534 // protein K63-linked ubiquitination // inferred from direct assay","0000151 // ubiquitin ligase complex // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031371 // ubiquitin conjugating enzyme complex // inferred from direct assay /// 0035370 // UBC13-UEV1A complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation","chr20:48697660-48732494 (-) // 87.97 // q13.13"]
["11718979_a_at",1769.8877,1740.5718,1912.5975,1778.6888,1826.4946,1771.2079,-0.0041160583,-0.028212547,0.107759476,0.0030403137,0.041303635,-0.0030403137,0.9363405,0.8092928,1.0079162,0.011375712,1.0079162,"up","HTATIP2",10553.0,"0001525 // angiogenesis // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // traceable author statement /// 0006917 // induction of apoptosis // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from direct assay /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045765 // regulation of angiogenesis // inferred from direct assay /// 0051170 // nuclear import // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from direct assay /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016491 // oxidoreductase activity // inferred from electronic annotation","chr11:20385342-20405414 (+) // 88.14 // p15.1"]
["11725032_a_at",72.27938,76.70398,69.14546,75.74322,75.825676,83.13946,-0.06831741,0.017399311,-0.13226748,-7.853508E-4,7.8487396E-4,0.1336317,0.54794884,0.16457549,-1.075946,-0.10560564,1.075946,"down","TPP1",1200.0,"0006508 // proteolysis // inferred from mutant phenotype /// 0006508 // proteolysis // inferred from electronic annotation /// 0006629 // lipid metabolic process // traceable author statement /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0007040 // lysosome organization // inferred from sequence or structural similarity /// 0007040 // lysosome organization // inferred from electronic annotation /// 0007399 // nervous system development // inferred from mutant phenotype /// 0008219 // cell death // inferred from electronic annotation /// 0030163 // protein catabolic process // non-traceable author statement /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0043171 // peptide catabolic process // inferred from mutant phenotype /// 0045453 // bone resorption // inferred from mutant phenotype /// 0050885 // neuromuscular process controlling balance // inferred from sequence or structural similarity /// 0050885 // neuromuscular process controlling balance // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005764 // lysosome // inferred from direct assay /// 0005764 // lysosome // inferred from mutant phenotype /// 0005764 // lysosome // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0043202 // lysosomal lumen // traceable author statement","0004175 // endopeptidase activity // inferred from direct assay /// 0004175 // endopeptidase activity // inferred from mutant phenotype /// 0004175 // endopeptidase activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from mutant phenotype /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from mutant phenotype /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0008240 // tripeptidyl-peptidase activity // inferred from direct assay /// 0008240 // tripeptidyl-peptidase activity // inferred from mutant phenotype /// 0008240 // tripeptidyl-peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042277 // peptide binding // inferred from sequence or structural similarity /// 0042277 // peptide binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:6634073-6640660 (-) // 73.44 // p15.4"]
["11717295_s_at",18.557016,17.08931,18.054897,19.939526,21.422201,18.86903,-0.0120277405,-0.13089848,-0.051602364,0.091638565,0.19511414,0.0120277405,0.38726443,0.060677942,-1.1207281,-0.16443636,1.1207281,"down","APOD",347.0,"0000302 // response to reactive oxygen species // inferred from direct assay /// 0000302 // response to reactive oxygen species // inferred from electronic annotation /// 0001525 // angiogenesis // non-traceable author statement /// 0006006 // glucose metabolic process // inferred from direct assay /// 0006629 // lipid metabolic process // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // non-traceable author statement /// 0007420 // brain development // inferred from sequence or structural similarity /// 0007568 // aging // non-traceable author statement /// 0010642 // negative regulation of platelet-derived growth factor receptor signaling pathway // inferred from direct assay /// 0014012 // peripheral nervous system axon regeneration // inferred from sequence or structural similarity /// 0042246 // tissue regeneration // inferred from sequence or structural similarity /// 0042308 // negative regulation of protein import into nucleus // inferred from direct assay /// 0042493 // response to drug // inferred from sequence or structural similarity /// 0048662 // negative regulation of smooth muscle cell proliferation // inferred from direct assay /// 0048678 // response to axon injury // inferred from sequence or structural similarity /// 0051895 // negative regulation of focal adhesion assembly // inferred from mutant phenotype /// 0060588 // negative regulation of lipoprotein lipid oxidation // inferred from direct assay /// 0060588 // negative regulation of lipoprotein lipid oxidation // inferred from electronic annotation /// 0071638 // negative regulation of monocyte chemotactic protein-1 production // inferred from direct assay /// 1900016 // negative regulation of cytokine production involved in inflammatory response // inferred from direct assay /// 2000098 // negative regulation of smooth muscle cell-matrix adhesion // inferred from mutant phenotype /// 2000405 // negative regulation of T cell migration // inferred from direct assay","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005622 // intracellular // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0022626 // cytosolic ribosome // inferred from sequence or structural similarity /// 0030425 // dendrite // inferred from sequence or structural similarity /// 0043025 // neuronal cell body // inferred from sequence or structural similarity /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0005215 // transporter activity // inferred from electronic annotation /// 0005319 // lipid transporter activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008289 // lipid binding // inferred from electronic annotation /// 0015485 // cholesterol binding // inferred from direct assay /// 0036094 // small molecule binding // inferred from electronic annotation","chr3:195295609-195311083 (-) // 72.39 // q29"]
["11760540_at",6.261325,6.8859816,6.6250443,6.2960234,6.667938,5.9246864,-0.04471755,0.092476845,0.036744595,-0.036744595,0.046055317,-0.12444663,0.7085508,0.3526166,1.047207,0.06654664,1.047207,"up","PTCHD4",442213.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008158 // hedgehog receptor activity // inferred from electronic annotation","chr6:47868630-48036389 (-) // 41.59 // p12.3"]
["11731508_a_at",5.7719088,6.2141256,5.790974,6.608043,5.9274697,5.4399476,-0.021562815,0.084940195,-0.016805172,0.17361188,0.016805172,-0.10701847,0.96603787,0.89617026,-1.008545,-0.012275515,1.008545,"down","ZNF649",65251.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:52392996-52408305 (-) // 61.01 // q13.41"]
["11740786_a_at",40.2653,41.707035,38.315777,42.369324,33.63162,40.14366,0.0021824837,0.052936077,-0.06941652,0.075665474,-0.2575364,-0.0021824837,0.8583388,0.623992,1.0400012,0.05658513,1.0400012,"up","SYNM",23336.0,"0045104 // intermediate filament cytoskeleton organization // traceable author statement","0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005882 // intermediate filament // inferred from direct assay /// 0005882 // intermediate filament // non-traceable author statement /// 0005882 // intermediate filament // inferred from electronic annotation /// 0005912 // adherens junction // inferred from direct assay /// 0005912 // adherens junction // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0043034 // costamere // inferred from direct assay /// 0060053 // neurofilament cytoskeleton // traceable author statement /// 0060053 // neurofilament cytoskeleton // inferred from electronic annotation","0005198 // structural molecule activity // inferred from electronic annotation /// 0005200 // structural constituent of cytoskeleton // inferred from expression pattern /// 0005515 // protein binding // inferred from physical interaction /// 0008307 // structural constituent of muscle // inferred from direct assay /// 0017166 // vinculin binding // inferred from direct assay /// 0019215 // intermediate filament binding // inferred from sequence or structural similarity /// 0019215 // intermediate filament binding // inferred from electronic annotation","chr15:99645285-99675800 (+) // 99.42 // q26.3"]
["11743264_x_at",2061.9468,2032.5212,2143.5273,2052.1318,2077.7322,2007.3945,0.0034418106,-0.017294884,0.05942154,-0.0034418106,0.014444351,-0.035241127,0.76386696,0.43942052,1.0162597,0.02326908,1.0162597,"up","C14orf2",9556.0,"","0005739 // mitochondrion // inferred from electronic annotation /// 0005753 // mitochondrial proton-transporting ATP synthase complex // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation","","chr14:104378624-104387868 (-) // 66.41 // q32.33"]
["11733714_a_at",65.56942,64.87404,66.17708,64.06732,64.59715,70.85661,0.0076909065,-0.0076909065,0.020999432,-0.025743484,-0.013861656,0.119570255,0.89082384,0.6991618,-1.0137172,-0.019655198,1.0137172,"down","NAA16",79612.0,"0006474 // N-terminal protein amino acid acetylation // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from sequence or structural similarity","0005634 // nucleus // inferred from sequence or structural similarity /// 0005667 // transcription factor complex // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity","0004872 // receptor activity // inferred from electronic annotation /// 0016407 // acetyltransferase activity // inferred from sequence or structural similarity /// 0043022 // ribosome binding // inferred from sequence or structural similarity","chr13:41885340-41932853 (+) // 97.59 // q14.11"]
["11737671_at",5.9841022,6.275053,5.746396,7.5345545,5.889118,6.501578,-0.034246445,0.034246445,-0.09272385,0.298141,-0.057329655,0.08540869,0.6481078,0.27160305,-1.1016363,-0.13964799,1.1016363,"down","GLB1L3",112937.0,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation","","0003824 // catalytic activity // inferred from electronic annotation /// 0004553 // hydrolase activity, hydrolyzing O-glycosyl compounds // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity, acting on glycosyl bonds // inferred from electronic annotation /// 0043169 // cation binding // inferred from electronic annotation","chr11:134146060-134189457 (+) // 84.64 // q25"]
["11725596_a_at",91.98015,97.64251,91.664154,91.19051,93.18184,84.72577,0.0024819374,0.08866978,-0.0024824142,-0.00995636,0.02120924,-0.116039276,0.6499621,0.2747618,1.0457118,0.06448524,1.0457118,"up","ZDHHC23",254887.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:113666747-113681829 (+) // 95.26 // q13.31"]
["11718242_a_at",9.516652,8.059133,8.128137,8.05691,9.38044,10.219747,0.124163866,-0.11566591,-0.10336566,-0.11606383,0.10336542,0.22699714,0.77838194,0.46279886,-1.0740458,-0.103055485,1.0740458,"down","PRUNE2",158471.0,"0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from mutant phenotype /// 0051318 // G1 phase // inferred from expression pattern","0005737 // cytoplasm // inferred from electronic annotation","0016462 // pyrophosphatase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:79226292-79521136 (-) // 97.03 // q21.2"]
["11755548_a_at",70.18498,72.54044,76.97669,66.87402,63.947857,70.87476,-0.0070548058,0.04056835,0.12620401,-0.07677126,-0.14132118,0.0070548058,0.45836973,0.10015264,1.0894387,0.12358499,1.0894387,"up","OSBPL8",114882.0,"0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // inferred from electronic annotation","","0005543 // phospholipid binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation","chr12:76749459-76879888 (-) // 99.85 // q21.2"]
["11762928_a_at",8.897064,9.1529045,8.04043,8.460779,8.205669,8.3366995,0.083195925,0.124096155,-0.06286073,0.010657072,-0.033512592,-0.010657072,0.7169988,0.36545965,1.0419706,0.059314586,1.0419706,"up","DNAJC18",202052.0,"0006457 // protein folding // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0031072 // heat shock protein binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // inferred from electronic annotation","chr5:138778004-138842292 (-) // 70.66 // q31.2"]
["11762323_at",38.772358,40.558216,32.869904,38.947304,41.933334,46.524906,-0.035730362,0.029235363,-0.27399158,-0.029235363,0.077338696,0.22724438,0.57895017,0.19281945,-1.1370361,-0.18527804,1.1370361,"down","HCN3",57657.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0035725 // sodium ion transmembrane transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0071805 // potassium ion transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005249 // voltage-gated potassium channel activity // inferred from electronic annotation /// 0005267 // potassium channel activity // inferred from electronic annotation /// 0005272 // sodium channel activity // inferred from electronic annotation /// 0030552 // cAMP binding // inferred from electronic annotation","chr1:155247263-155248128 (+) // 98.74 // q22"]
["11740704_a_at",52.54127,51.215286,50.87644,59.733738,56.540817,54.495205,-0.026339054,-0.06321573,-0.07279253,0.15875626,0.079502106,0.026339054,0.28160906,0.025549287,-1.1036747,-0.14231494,1.1036747,"down","ARID4A",5926.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0017053 // transcriptional repressor complex // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement","chr14:58765221-58840444 (+) // 97.91 // q23.1"]
["11735556_at",26.42087,29.117014,21.867233,30.41112,24.630207,28.015793,-0.04228115,0.09790325,-0.3151884,0.16063976,-0.14353037,0.04228115,0.8076799,0.51798123,-1.0764781,-0.106319,1.0764781,"down","AMZ1",155185.0,"0006508 // proteolysis // inferred from electronic annotation","","0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:2719155-2755069 (+) // 78.82 // p22.3"]
["11733968_a_at",9.33029,8.991759,9.143482,9.470741,9.200155,9.493943,0.010131836,-0.043186665,-0.019046307,0.03168702,-0.010131836,0.035217285,0.54596543,0.16218747,-1.0254742,-0.036291182,1.0254742,"down","ELF5",2001.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0007398 // ectoderm development // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0060644 // mammary gland epithelial cell differentiation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr11:34500341-34535347 (-) // 93.66 // p13"]
["11726405_a_at",11.450977,10.368459,11.195633,10.924243,11.3479,11.833935,0.022789955,-0.12047911,-0.009744644,-0.04514742,0.009744644,0.07024932,0.7609513,0.43475783,-1.0334201,-0.04742683,1.0334201,"down","ASPA",443.0,"0006533 // aspartate catabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0022010 // central nervous system myelination // inferred from electronic annotation /// 0048714 // positive regulation of oligodendrocyte differentiation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0004046 // aminoacylase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016788 // hydrolase activity, acting on ester bonds // inferred from electronic annotation /// 0016811 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides // inferred from electronic annotation /// 0019807 // aspartoacylase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:3379278-3403196 (+) // 64.05 // p13.2"]
["11715700_s_at",398.91812,403.06723,428.25345,368.20767,370.36,364.92218,0.05358219,0.068510056,0.15595436,-0.061990738,-0.05358219,-0.07492161,0.18465985,0.008637186,1.1143329,0.1561803,1.1143329,"up","WDR6",11180.0,"0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0010507 // negative regulation of autophagy // inferred from mutant phenotype","0005625 // soluble fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0008180 // signalosome // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0043560 // insulin receptor substrate binding // inferred from electronic annotation","chr3:49044494-49053382 (+) // 98.27 // p21.31"]
["11756774_a_at",11.680924,12.548829,10.907586,11.344731,11.757602,12.136349,-0.004719734,0.09867859,-0.10354233,-0.046851873,0.004719734,0.050460577,0.9788072,0.93101245,-1.004147,-0.005970561,1.004147,"down","SPATA18",132671.0,"0006974 // response to DNA damage stimulus // inferred from direct assay /// 0033554 // cellular response to stress // inferred from direct assay /// 0035694 // mitochondrial protein catabolic process // inferred from mutant phenotype /// 0035695 // mitochondrion degradation by induced vacuole formation // inferred from mutant phenotype","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from mutant phenotype /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from direct assay /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0044447 // axoneme part // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr4:52917626-52961210 (+) // 99.9 // q12"]
["11736476_a_at",66.26095,62.71561,58.9594,61.25417,58.588177,58.546284,0.14089394,0.061559677,-0.027543068,0.027542591,-0.036655426,-0.0376873,0.6210329,0.23726109,1.0525608,0.073903576,1.0525608,"up","TCHP",84260.0,"0006915 // apoptotic process // inferred from direct assay /// 0006915 // apoptotic process // inferred from electronic annotation /// 0030308 // negative regulation of cell growth // inferred from direct assay","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0045095 // keratin filament // inferred from direct assay /// 0045179 // apical cortex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr12:110338027-110355873 (+) // 94.51 // q24.11"]
["11760690_at",9.969353,9.146312,10.206709,8.664479,9.749841,11.004857,0.01606059,-0.10824919,0.050006628,-0.18632603,-0.01606059,0.15862918,0.9988658,0.99643856,1.0003641,5.2513945E-4,1.0003641,"up","VWA2",340706.0,"","0005576 // extracellular region // inferred from electronic annotation","","chr10:115999088-116051794 (+) // 98.73 // q25.3"]
["11742381_at",236.91325,240.2788,223.94862,257.26758,255.40317,227.17294,-0.010175228,0.010175228,-0.09136677,0.108735085,0.098241806,-0.07074356,0.6814306,0.3138347,-1.053994,-0.07586674,1.053994,"down","OR5H1",26341.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr3:97851541-97852483 (+) // 100.0 // q11.2 /// chr3:97887543-97888485 (+) // 97.13 // q11.2"]
["11718021_s_at",1347.9954,1399.6732,1457.9115,1448.7081,1610.62,1420.7781,-0.0899086,-0.03563404,0.023179054,0.014042854,0.16689205,-0.014042854,0.6228675,0.239559,-1.0641872,-0.089751914,1.0641872,"down","SSFA2",6744.0,"","0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // non-traceable author statement","0003779 // actin binding // inferred from electronic annotation","chr2:182756442-182795465 (+) // 95.51 // q31.3"]
["11743517_a_at",832.87695,837.18134,928.052,900.91583,880.4445,869.7522,-0.07131481,-0.06387806,0.08478737,0.041974068,0.008813858,-0.008813858,0.84387493,0.592234,-1.0215737,-0.030793237,1.0215737,"down","NNT",23530.0,"0006099 // tricarboxylic acid cycle // traceable author statement /// 0015992 // proton transport // traceable author statement /// 0015992 // proton transport // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005746 // mitochondrial respiratory chain // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003957 // NAD(P)+ transhydrogenase (B-specific) activity // traceable author statement /// 0008746 // NAD(P)+ transhydrogenase activity // not recorded /// 0008750 // NAD(P)+ transhydrogenase (AB-specific) activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0050661 // NADP binding // inferred from direct assay /// 0050661 // NADP binding // inferred from electronic annotation /// 0051287 // NAD binding // traceable author statement","chr5:43602790-43706244 (+) // 97.83 // p12"]
["11748644_x_at",150.83589,166.7606,165.67558,158.72711,143.374,157.84955,-0.06956911,0.07523012,0.06581211,0.00399971,-0.14276552,-0.0039992332,0.70380396,0.34506425,1.0507451,0.07141277,1.0507451,"up","BCAR1",9564.0,"0001558 // regulation of cell growth // traceable author statement /// 0007015 // actin filament organization // inferred from direct assay /// 0007015 // actin filament organization // inferred from sequence or structural similarity /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // inferred from sequence or structural similarity /// 0007173 // epidermal growth factor receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from sequence or structural similarity /// 0007186 // G-protein coupled receptor signaling pathway // non-traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007229 // integrin-mediated signaling pathway // inferred from direct assay /// 0007229 // integrin-mediated signaling pathway // inferred from sequence or structural similarity /// 0007596 // blood coagulation // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0008286 // insulin receptor signaling pathway // inferred from sequence or structural similarity /// 0008286 // insulin receptor signaling pathway // inferred from electronic annotation /// 0016477 // cell migration // inferred from direct assay /// 0016477 // cell migration // inferred from electronic annotation /// 0016477 // cell migration // inferred from sequence or structural similarity /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0030335 // positive regulation of cell migration // inferred from sequence or structural similarity /// 0035729 // cellular response to hepatocyte growth factor stimulus // inferred from mutant phenotype /// 0042981 // regulation of apoptotic process // traceable author statement /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from sequence or structural similarity /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from electronic annotation /// 0048010 // vascular endothelial growth factor receptor signaling pathway // inferred from mutant phenotype /// 0048011 // nerve growth factor receptor signaling pathway // inferred from sequence or structural similarity /// 0048011 // nerve growth factor receptor signaling pathway // inferred from electronic annotation /// 0048012 // hepatocyte growth factor receptor signaling pathway // inferred from mutant phenotype /// 0050851 // antigen receptor-mediated signaling pathway // inferred from direct assay /// 0050851 // antigen receptor-mediated signaling pathway // inferred from sequence or structural similarity /// 0050852 // T cell receptor signaling pathway // non-traceable author statement /// 0050853 // B cell receptor signaling pathway // inferred from direct assay /// 0050853 // B cell receptor signaling pathway // inferred from sequence or structural similarity /// 0051301 // cell division // non-traceable author statement /// 0060326 // cell chemotaxis // inferred from mutant phenotype","0001726 // ruffle // inferred from direct assay /// 0001726 // ruffle // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0005925 // focal adhesion // inferred from sequence or structural similarity /// 0005925 // focal adhesion // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","0004871 // signal transducer activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0019903 // protein phosphatase binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from electronic annotation","chr16:75263408-75300280 (-) // 98.48 // q23.1"]
["11750349_x_at",14.510708,14.3193,14.303149,14.38827,14.560052,13.644772,0.015691042,-0.0034661293,-0.00509429,0.0034661293,0.020588398,-0.07307887,0.82951593,0.5609708,1.0130591,0.018718397,1.0130591,"up","GRID1",2894.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0035235 // ionotropic glutamate receptor signaling pathway // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030288 // outer membrane-bounded periplasmic space // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004970 // ionotropic glutamate receptor activity // inferred from electronic annotation /// 0005215 // transporter activity // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005234 // extracellular-glutamate-gated ion channel activity // inferred from electronic annotation","chr10:87361733-87551316 (-) // 98.5 // q23.1"]
["11748747_a_at",9.691487,8.506508,8.083397,7.4756575,8.616579,8.506508,0.18815112,0.0,-0.0736053,-0.18636656,0.01854825,0.0,0.74414057,0.4073603,1.0674151,0.09412135,1.0674151,"up","ARHGAP25",9938.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation","chr2:68961974-69053434 (+) // 99.26 // p13.3"]
["11727608_x_at",180.27371,170.3926,155.12358,175.09163,162.11145,187.88632,0.06170225,-0.019624233,-0.15506887,0.019623756,-0.09150028,0.12137365,0.8347612,0.5722844,-1.0382563,-0.054162607,1.0382563,"down","OGG1",4968.0,"0006281 // DNA repair // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006281 // DNA repair // non-traceable author statement /// 0006284 // base-excision repair // traceable author statement /// 0006284 // base-excision repair // inferred from electronic annotation /// 0006285 // base-excision repair, AP site formation // traceable author statement /// 0006289 // nucleotide-excision repair // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation /// 0009314 // response to radiation // inferred from direct assay /// 0033158 // regulation of protein import into nucleus, translocation // inferred from direct assay /// 0045007 // depurination // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0016363 // nuclear matrix // inferred from direct assay /// 0016363 // nuclear matrix // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation","0003684 // damaged DNA binding // inferred from electronic annotation /// 0003684 // damaged DNA binding // traceable author statement /// 0003824 // catalytic activity // inferred from electronic annotation /// 0003906 // DNA-(apurinic or apyrimidinic site) lyase activity // inferred from electronic annotation /// 0004519 // endonuclease activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008534 // oxidized purine base lesion DNA N-glycosylase activity // inferred from electronic annotation /// 0008534 // oxidized purine base lesion DNA N-glycosylase activity // traceable author statement /// 0008534 // oxidized purine base lesion DNA N-glycosylase activity // non-traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity, acting on glycosyl bonds // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation","chr3:9791627-9799197 (+) // 99.21 // p25.3"]
["11729086_a_at",40.626976,43.971188,37.270744,39.563156,43.37997,45.646313,-0.04729557,0.06682491,-0.17168999,-0.08557606,0.04729557,0.12076473,0.7650394,0.44127417,-1.055711,-0.078214996,1.055711,"down","TBX19",9095.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0021983 // pituitary gland development // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0045165 // cell fate commitment // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation","chr1:168250277-168283285 (+) // 67.63 // q24.2"]
["11754966_a_at",50.20849,43.789215,43.54775,37.02303,42.17413,42.95771,0.21517372,0.017817974,0.009840488,-0.22433472,-0.036399364,-0.009840488,0.5272221,0.14670853,1.1259444,0.17113556,1.1259444,"up","AIF1L",83543.0,"","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005884 // actin filament // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0051015 // actin filament binding // inferred from direct assay","chr9:133971968-133998639 (+) // 88.18 // q34.12"]
["11759222_at",42.265713,38.613087,40.434475,45.545372,37.36137,35.87544,0.09714985,-0.033247948,0.033247948,0.20496655,-0.08079052,-0.13934135,0.9160225,0.75668406,1.0262899,0.037438367,1.0262899,"up","KIAA1958",158405.0,"","","","chr9:115249247-115427580 (+) // 91.92 // q32"]
["11747208_a_at",10.280007,10.506499,9.432754,11.794644,10.809532,10.17186,-0.015720367,0.015720606,-0.13981056,0.18257046,0.05674243,-0.030977964,0.5974751,0.211351,-1.0837623,-0.11604835,1.0837623,"down","MYSM1",114803.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0016578 // histone deubiquitination // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0016585 // chromatin remodeling complex // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0004221 // ubiquitin thiolesterase activity // inferred from direct assay /// 0004843 // ubiquitin-specific protease activity // inferred from direct assay /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from mutant phenotype /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042393 // histone binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:59125396-59134578 (-) // 99.86 // p32.1"]
["11748549_a_at",45.459675,43.019176,39.369617,38.689533,42.49528,37.027935,0.15239477,0.072787285,-0.055109978,-0.08024931,0.055109978,-0.14357853,0.6315565,0.25086415,1.0814223,0.11293005,1.0814223,"up","ZDHHC17",23390.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0007165 // signal transduction // inferred from mutant phenotype /// 0015693 // magnesium ion transport // inferred from direct assay /// 0018345 // protein palmitoylation // inferred from electronic annotation /// 0042953 // lipoprotein transport // inferred from direct assay /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from mutant phenotype","0000139 // Golgi membrane // inferred from direct assay /// 0000139 // Golgi membrane // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0030660 // Golgi-associated vesicle membrane // inferred from direct assay /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0004871 // signal transducer activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0015095 // magnesium ion transmembrane transporter activity // inferred from direct assay /// 0016409 // palmitoyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0019706 // protein-cysteine S-palmitoleyltransferase activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:77157882-77220796 (+) // 100.0 // q21.2"]
["11755406_x_at",201.2804,209.00348,203.57672,204.23302,185.35219,209.14197,-0.018687725,0.03563261,-0.0023217201,0.0023217201,-0.13762522,0.036588192,0.8163505,0.5345489,1.0265326,0.037779514,1.0265326,"up","NPLOC4",55666.0,"0006944 // cellular membrane fusion // inferred from sequence or structural similarity /// 0006944 // cellular membrane fusion // inferred from electronic annotation /// 0007030 // Golgi organization // inferred from sequence or structural similarity /// 0007030 // Golgi organization // inferred from electronic annotation /// 0030433 // ER-associated protein catabolic process // inferred from sequence or structural similarity /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0042175 // nuclear outer membrane-endoplasmic reticulum membrane network // inferred from sequence or structural similarity","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:79525644-79526819 (-) // 81.11 // q25.3"]
["11724236_a_at",211.03093,200.33209,205.54976,199.38188,201.23117,199.29741,0.07183027,-0.003230095,0.0338645,-0.010089874,0.003230095,-0.010700703,0.5247952,0.14504337,1.0281198,0.040008385,1.0281198,"up","RIPK2",8767.0,"0000187 // activation of MAPK activity // traceable author statement /// 0001961 // positive regulation of cytokine-mediated signaling pathway // inferred from electronic annotation /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002250 // adaptive immune response // inferred from sequence or structural similarity /// 0002250 // adaptive immune response // inferred from electronic annotation /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0002827 // positive regulation of T-helper 1 type immune response // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006916 // anti-apoptosis // traceable author statement /// 0006954 // inflammatory response // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007249 // I-kappaB kinase/NF-kappaB cascade // inferred from sequence or structural similarity /// 0007249 // I-kappaB kinase/NF-kappaB cascade // inferred from electronic annotation /// 0007254 // JNK cascade // traceable author statement /// 0008063 // Toll signaling pathway // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0031398 // positive regulation of protein ubiquitination // inferred from mutant phenotype /// 0031663 // lipopolysaccharide-mediated signaling pathway // inferred from electronic annotation /// 0032722 // positive regulation of chemokine production // inferred from electronic annotation /// 0032729 // positive regulation of interferon-gamma production // inferred from electronic annotation /// 0032743 // positive regulation of interleukin-2 production // inferred from electronic annotation /// 0032755 // positive regulation of interleukin-6 production // inferred from electronic annotation /// 0032760 // positive regulation of tumor necrosis factor production // inferred from electronic annotation /// 0032874 // positive regulation of stress-activated MAPK cascade // inferred from electronic annotation /// 0033091 // positive regulation of immature T cell proliferation // inferred from electronic annotation /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // inferred from direct assay /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // inferred from electronic annotation /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0042098 // T cell proliferation // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from direct assay /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from electronic annotation /// 0043330 // response to exogenous dsRNA // inferred from electronic annotation /// 0045087 // innate immune response // inferred from sequence or structural similarity /// 0045087 // innate immune response // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation /// 0045627 // positive regulation of T-helper 1 cell differentiation // inferred from electronic annotation /// 0046330 // positive regulation of JNK cascade // inferred from electronic annotation /// 0046641 // positive regulation of alpha-beta T cell proliferation // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0050830 // defense response to Gram-positive bacterium // inferred from electronic annotation /// 0050852 // T cell receptor signaling pathway // inferred from sequence or structural similarity /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0050852 // T cell receptor signaling pathway // inferred from electronic annotation /// 0051092 // positive regulation of NF-kappaB transcription factor activity // traceable author statement /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from electronic annotation /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from electronic annotation /// 0070423 // nucleotide-binding oligomerization domain containing signaling pathway // traceable author statement /// 0070427 // nucleotide-binding oligomerization domain containing 1 signaling pathway // inferred from electronic annotation /// 0070431 // nucleotide-binding oligomerization domain containing 2 signaling pathway // inferred from electronic annotation /// 0070555 // response to interleukin-1 // inferred from electronic annotation /// 0070671 // response to interleukin-12 // inferred from electronic annotation /// 0070673 // response to interleukin-18 // inferred from electronic annotation /// 0071222 // cellular response to lipopolysaccharide // inferred from electronic annotation /// 0071223 // cellular response to lipoteichoic acid // inferred from electronic annotation /// 0071224 // cellular response to peptidoglycan // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004715 // non-membrane spanning protein tyrosine kinase activity // inferred from electronic annotation /// 0004871 // signal transducer activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0030274 // LIM domain binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0050700 // CARD domain binding // inferred from direct assay /// 0050700 // CARD domain binding // inferred from physical interaction","chr8:90769960-90803292 (+) // 97.09 // q21.3"]
["11743158_at",652.8742,610.09076,665.0005,648.70734,639.11005,615.37775,0.019989014,-0.07779217,0.046539307,0.010751724,-0.010751724,-0.06534386,0.8933572,0.7034544,1.0125735,0.018026605,1.0125735,"up","GTF2F2",2963.0,"0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // inferred from electronic annotation /// 0006368 // transcription elongation from RNA polymerase II promoter // traceable author statement /// 0006370 // 7-methylguanosine mRNA capping // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0050434 // positive regulation of viral transcription // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005674 // transcription factor TFIIF complex // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr13:45694596-45858613 (+) // 98.34 // q14.12"]
["11746273_x_at",134.36903,138.40588,142.35529,144.42639,139.64848,139.58315,-0.055261612,-0.01255703,0.028033733,0.04887247,3.376007E-4,-3.3712387E-4,0.71786076,0.3664922,-1.0206956,-0.029552631,1.0206956,"down","DUS4L",11062.0,"0008033 // tRNA processing // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","","0003824 // catalytic activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0017150 // tRNA dihydrouridine synthase activity // inferred from electronic annotation /// 0050660 // flavin adenine dinucleotide binding // inferred from electronic annotation","chr7:107204401-107218750 (+) // 93.76 // q22.3"]
["11737005_a_at",8.940417,7.286222,6.7451844,5.963833,7.307356,7.211357,0.30262136,0.0074501038,-0.103863,-0.28148103,0.011628628,-0.0074501038,0.7094419,0.35398602,1.1181939,0.16117033,1.1181939,"up","ZNF782",158431.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:99578672-99616770 (-) // 95.74 // q22.33"]
["11720113_at",411.48776,416.13083,438.59595,427.8607,413.93164,431.6452,-0.036239624,-0.020051956,0.0558033,0.020051956,-0.02769661,0.032756805,0.9376974,0.81320924,-1.0059325,-0.008533429,1.0059325,"down","SNTB2",6645.0,"","0005624 // membrane fraction // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0016010 // dystrophin-associated glycoprotein complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030658 // transport vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation","chr16:69221010-69342954 (+) // 86.23 // q22.1"]
["11731029_a_at",11.904216,11.673081,12.68185,11.575008,10.782128,11.366433,0.03437352,0.0060863495,0.12566614,-0.006086111,-0.10845733,-0.032319546,0.44559166,0.092424266,1.0749948,0.10432968,1.0749948,"up","SLC25A18",83733.0,"0006810 // transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0015293 // symporter activity // inferred from electronic annotation","chr22:18043138-18073651 (+) // 94.34 // q11.21"]
["11721059_a_at",130.05301,120.39069,122.656586,136.87408,121.78282,113.391266,0.08963251,-0.021743774,0.0051574707,0.1633811,-0.005156994,-0.10815811,0.97951907,0.9332783,1.0053236,0.0076600295,1.0053236,"up","ZNF189",7743.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:104161135-104172935 (+) // 99.0 // q31.1"]
["11722875_s_at",57.732246,55.151012,55.889904,53.4904,59.93094,53.549854,0.05638981,-0.009599686,0.0096001625,-0.053707123,0.11031389,-0.052104473,0.926028,0.77977204,1.0120609,0.017296078,1.0120609,"up","LRBA",987.0,"","0005764 // lysosome // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation","","chr4:151185609-151936879 (-) // 98.7 // q31.3"]
["11754523_a_at",2444.7354,2427.5142,2509.9763,2473.776,2629.8633,2440.5535,-0.008518219,-0.018716812,0.02947712,0.008518219,0.09679127,-0.0109882355,0.766749,0.44489914,-1.0215027,-0.030693064,1.0215027,"down","DPM1",8813.0,"0006486 // protein glycosylation // inferred from electronic annotation /// 0006488 // dolichol-linked oligosaccharide biosynthetic process // traceable author statement /// 0006501 // C-terminal protein lipidation // traceable author statement /// 0006506 // GPI anchor biosynthetic process // inferred from direct assay /// 0006506 // GPI anchor biosynthetic process // inferred from electronic annotation /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0019348 // dolichol metabolic process // inferred from direct assay /// 0019348 // dolichol metabolic process // inferred from electronic annotation /// 0019673 // GDP-mannose metabolic process // inferred from electronic annotation /// 0035268 // protein mannosylation // inferred from direct assay /// 0035269 // protein O-linked mannosylation // inferred from direct assay /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0033185 // dolichol-phosphate-mannose synthase complex // inferred from direct assay","0004169 // dolichyl-phosphate-mannose-protein mannosyltransferase activity // inferred from direct assay /// 0004582 // dolichyl-phosphate beta-D-mannosyltransferase activity // inferred from direct assay /// 0004582 // dolichyl-phosphate beta-D-mannosyltransferase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005537 // mannose binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0043178 // alcohol binding // inferred from electronic annotation","chr20:49551410-49575039 (-) // 74.03 // q13.13"]
["11755907_a_at",355.77213,367.34122,377.88983,365.98828,386.6036,358.6804,-0.04350567,0.002661705,0.043506622,-0.002661705,0.07639599,-0.031760216,0.92007643,0.7649194,-1.0091243,-0.01310386,1.0091243,"down","ATP13A1",57130.0,"0006200 // ATP catabolic process // inferred from electronic annotation /// 0006812 // cation transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0015662 // ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016820 // hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:19756011-19774878 (-) // 97.98 // p13.11"]
["11747464_a_at",674.3885,671.9326,705.8551,673.77405,661.0463,669.0495,0.0032892227,-0.0019741058,0.06908131,0.0019741058,-0.025539398,-0.008177757,0.61750203,0.23266432,1.0238799,0.03404648,1.0238799,"up","SERINC3",10955.0,"0006917 // induction of apoptosis // inferred from electronic annotation","0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","","chr20:43128607-43150737 (-) // 99.95 // q13.12"]
["11724635_at",706.7291,718.0098,721.37616,714.2067,748.8844,733.7865,-0.026220322,-0.0033740997,0.0033740997,-0.011035919,0.057365417,0.027982712,0.58437574,0.19807793,-1.0234998,-0.033510886,1.0234998,"down","YOD1",55432.0,"0006508 // proteolysis // inferred from electronic annotation /// 0006520 // cellular amino acid metabolic process // inferred from sequence or structural similarity /// 0006986 // response to unfolded protein // inferred from electronic annotation /// 0030433 // ER-associated protein catabolic process // inferred from mutant phenotype /// 0030968 // endoplasmic reticulum unfolded protein response // inferred from mutant phenotype /// 0070536 // protein K63-linked deubiquitination // inferred from direct assay /// 0071108 // protein K48-linked deubiquitination // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation","0004843 // ubiquitin-specific protease activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:207217193-207224553 (-) // 98.23 // q32.2"]
["11737959_at",9.056737,9.496088,8.14255,9.188414,9.47025,8.991759,-0.010412216,0.057929993,-0.16392303,0.010412216,0.053998947,-0.020800114,0.79006404,0.48318747,-1.0376636,-0.05333878,1.0376636,"down","SCGB1D4",404552.0,"","0005576 // extracellular region // inferred from electronic annotation","","chr11:62063748-62066536 (-) // 100.0 // q12.3"]
["11750688_a_at",13.271701,14.37404,15.101683,13.667766,13.423401,13.56039,-0.036735058,0.078377485,0.14962077,0.005689144,-0.020338297,-0.0056893826,0.6449493,0.26756704,1.0501052,0.07053389,1.0501052,"up","EFR3B",22979.0,"","","","chr2:25338855-25377434 (+) // 96.12 // p23.3"]
["11730348_at",126.64044,117.826584,105.84187,114.73055,122.50044,118.36907,0.100759506,-0.0033130646,-0.15806818,-0.04172945,0.052808285,0.0033135414,0.92243624,0.77022123,-1.017483,-0.025004685,1.017483,"down","KIAA1609",57707.0,"","","0005515 // protein binding // inferred from physical interaction","chr16:84509965-84538364 (-) // 82.02 // q24.1"]
["11762498_at",24.480267,28.027695,24.826534,23.920876,21.626991,25.160715,-0.010131836,0.18510199,0.010131836,-0.043480873,-0.18891811,0.029421806,0.60673213,0.22068577,1.0938082,0.12935975,1.0938082,"up",0.010131836,"","","0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation","0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation"]
["11725084_a_at",1193.4974,1175.2806,1182.8737,1177.3942,1156.4274,1162.5421,0.02089405,-0.0012960434,0.007994652,0.0012960434,-0.024626732,-0.017018318,0.43653503,0.086852826,1.0158217,0.02264719,1.0158217,"up","UCHL5",51377.0,"0006281 // DNA repair // inferred from electronic annotation /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // inferred from mutant phenotype /// 0016579 // protein deubiquitination // inferred from direct assay /// 0021670 // lateral ventricle development // inferred from electronic annotation /// 0030901 // midbrain development // inferred from electronic annotation /// 0048853 // forebrain morphogenesis // inferred from electronic annotation /// 0061136 // regulation of proteasomal protein catabolic process // inferred from mutant phenotype","0000502 // proteasome complex // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0031011 // Ino80 complex // inferred from direct assay","0004221 // ubiquitin thiolesterase activity // inferred from electronic annotation /// 0004843 // ubiquitin-specific protease activity // inferred from direct assay /// 0004866 // endopeptidase inhibitor activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0008242 // omega peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0070628 // proteasome binding // inferred from direct assay","chr1:192984074-193028521 (-) // 99.88 // q31.2"]
["11754821_s_at",2630.9954,2606.4214,2667.043,2599.1333,2590.2742,2528.6365,0.015558243,0.0020198822,0.035190582,-0.0020198822,-0.00694561,-0.041690826,0.44793028,0.0940435,1.0241841,0.034475077,1.0241841,"up","SLC38A1",81539.0,"0001504 // neurotransmitter uptake // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006811 // ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0006865 // amino acid transport // traceable author statement /// 0006865 // amino acid transport // inferred from electronic annotation /// 0006868 // glutamine transport // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0015804 // neutral amino acid transport // non-traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0005624 // membrane fraction // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation","0005283 // sodium:amino acid symporter activity // non-traceable author statement /// 0015175 // neutral amino acid transmembrane transporter activity // non-traceable author statement /// 0015186 // L-glutamine transmembrane transporter activity // inferred from electronic annotation /// 0015293 // symporter activity // inferred from electronic annotation","chr12:46581565-46662782 (-) // 92.55 // q13.11"]
["11738543_a_at",10.408483,10.772212,10.124592,10.575058,11.6366,8.653585,-0.011452913,0.03810191,-0.051348686,0.011452913,0.14945674,-0.27784276,0.9412612,0.8227096,1.0215391,0.030744413,1.0215391,"up","TFAP2D",83741.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation","chr6:50681256-50740746 (+) // 97.5 // p12.3"]
["11730391_at",58.722504,64.75904,65.20733,76.69077,67.1371,69.02362,-0.17215872,-0.0309906,-0.021038055,0.21298075,0.021037579,0.06101799,0.43506944,0.08548189,-1.1274587,-0.17307457,1.1274587,"down","SEMA3A",10371.0,"0002027 // regulation of heart rate // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007411 // axon guidance // inferred from electronic annotation /// 0007413 // axonal fasciculation // inferred from electronic annotation /// 0010633 // negative regulation of epithelial cell migration // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030517 // negative regulation of axon extension // inferred from electronic annotation /// 0048485 // sympathetic nervous system development // traceable author statement /// 0048841 // regulation of axon extension involved in axon guidance // inferred from direct assay /// 0048841 // regulation of axon extension involved in axon guidance // inferred from electronic annotation /// 0048843 // negative regulation of axon extension involved in axon guidance // inferred from electronic annotation /// 0048880 // sensory system development // traceable author statement /// 0050919 // negative chemotaxis // traceable author statement /// 0050919 // negative chemotaxis // inferred from electronic annotation /// 0060666 // dichotomous subdivision of terminal units involved in salivary gland branching // inferred from electronic annotation /// 0071526 // semaphorin-plexin signaling pathway // traceable author statement","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0045499 // chemorepellent activity // traceable author statement /// 0045499 // chemorepellent activity // inferred from electronic annotation","chr7:83587074-83824459 (-) // 97.23 // q21.11"]
["11716360_a_at",1836.706,1783.707,1833.5084,1793.2312,1854.756,1855.0576,0.0012569427,-0.040985107,-0.0012569427,-0.033302307,0.015365601,0.0156002045,0.83610755,0.5770909,-1.0089697,-0.012882799,1.0089697,"down","CNIH",10175.0,"0006810 // transport // inferred from electronic annotation /// 0006955 // immune response // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr14:54893104-54908149 (-) // 98.63 // q22.2"]
["11748782_a_at",795.32764,772.10095,796.81793,783.5275,829.703,797.36224,-0.0013504028,-0.0441103,0.0013504028,-0.02291584,0.059695244,0.0023355484,0.730082,0.38597754,-1.0194151,-0.027741686,1.0194151,"down","CASP9",842.0,"0006508 // proteolysis // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0008629 // induction of apoptosis by intracellular signals // traceable author statement /// 0008635 // activation of cysteine-type endopeptidase activity involved in apoptotic process by cytochrome c // traceable author statement /// 0009411 // response to UV // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043525 // positive regulation of neuron apoptotic process // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0071549 // cellular response to dexamethasone stimulus // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0043293 // apoptosome // inferred from direct assay","0004197 // cysteine-type endopeptidase activity // inferred from electronic annotation /// 0004197 // cysteine-type endopeptidase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008047 // enzyme activator activity // traceable author statement /// 0008233 // peptidase activity // inferred from direct assay /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr1:15818860-15850695 (-) // 89.02 // p36.21"]
["11719089_a_at",134.12561,143.04063,130.46782,169.82518,140.05331,162.09645,-0.077616215,0.015224457,-0.117506504,0.2628498,-0.015224457,0.19565201,0.43829075,0.088155046,-1.1548657,-0.20772514,1.1548657,"down","PCK2",5106.0,"0005975 // carbohydrate metabolic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006094 // gluconeogenesis // inferred from electronic annotation /// 0006094 // gluconeogenesis // traceable author statement /// 0006107 // oxaloacetate metabolic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation","0005625 // soluble fraction // inferred from electronic annotation /// 0005739 // mitochondrion // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0004611 // phosphoenolpyruvate carboxykinase activity // traceable author statement /// 0004611 // phosphoenolpyruvate carboxykinase activity // inferred from electronic annotation /// 0004613 // phosphoenolpyruvate carboxykinase (GTP) activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0016831 // carboxy-lyase activity // inferred from electronic annotation /// 0017076 // purine nucleotide binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr14:24563346-24573339 (+) // 97.34 // q11.2"]
["200059_PM_s_at",4945.2173,4925.603,5101.243,4988.86,5042.205,5029.269,-0.01849556,-0.02422905,0.02631855,-0.005818367,0.009525299,0.0058193207,0.8614362,0.63074327,-1.0060096,-0.008644042,1.0060096,"down","RHOA",387.0,"0000902 // cell morphogenesis // inferred from electronic annotation /// 0006184 // GTP catabolic process // traceable author statement /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007160 // cell-matrix adhesion // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007266 // Rho protein signal transduction // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007519 // skeletal muscle tissue development // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0030036 // actin cytoskeleton organization // traceable author statement /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0030334 // regulation of cell migration // inferred from mutant phenotype /// 0030521 // androgen receptor signaling pathway // inferred from electronic annotation /// 0033144 // negative regulation of intracellular steroid hormone receptor signaling pathway // inferred from electronic annotation /// 0033688 // regulation of osteoblast proliferation // inferred from sequence or structural similarity /// 0033688 // regulation of osteoblast proliferation // inferred from electronic annotation /// 0042346 // positive regulation of NF-kappaB import into nucleus // non-traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from expression pattern /// 0043149 // stress fiber assembly // inferred from electronic annotation /// 0043297 // apical junction assembly // inferred from mutant phenotype /// 0043297 // apical junction assembly // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0043931 // ossification involved in bone maturation // inferred from sequence or structural similarity /// 0043931 // ossification involved in bone maturation // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from mutant phenotype /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0050770 // regulation of axonogenesis // traceable author statement /// 0050771 // negative regulation of axonogenesis // traceable author statement /// 0050772 // positive regulation of axonogenesis // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement /// 0051301 // cell division // inferred from electronic annotation /// 0051496 // positive regulation of stress fiber assembly // inferred from direct assay /// 0061383 // trabecula morphogenesis // inferred from sequence or structural similarity /// 0061383 // trabecula morphogenesis // inferred from electronic annotation /// 0071777 // positive regulation of cell cycle cytokinesis // inferred from mutant phenotype /// 0090307 // spindle assembly involved in mitosis // inferred from mutant phenotype","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005938 // cell cortex // inferred from direct assay /// 0005938 // cell cortex // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030496 // midbody // inferred from electronic annotation /// 0032154 // cleavage furrow // inferred from direct assay /// 0032154 // cleavage furrow // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0043296 // apical junction complex // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0017022 // myosin binding // inferred from physical interaction","chr3:49396929-49449362 (-) // 98.12 // p21.31"]
["11728549_at",9.507843,9.494996,10.981942,8.464946,9.57617,10.164163,-0.0051653385,-0.0071163177,0.20277786,-0.1727829,0.0051653385,0.09113598,0.765359,0.4418204,1.0636272,0.08899263,1.0636272,"up","ZNF536",9745.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0048387 // negative regulation of retinoic acid receptor signaling pathway // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0044323 // retinoic acid-responsive element binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:30863318-31048966 (+) // 99.06 // q12"]
["11749239_s_at",129.98128,133.59677,144.87541,133.21928,125.49865,130.35751,-0.019833565,0.01974678,0.1366744,0.015664577,-0.07046604,-0.0156641,0.6428693,0.26504618,1.0490022,0.06901766,1.0490022,"up","ZNF672",79894.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:249132490-249142142 (+) // 41.24 // q44"]
["11721004_x_at",2351.349,2351.3787,2300.5403,2329.997,2347.4077,2316.4075,0.0077905655,0.0078086853,-0.02372551,-0.00537014,0.00537014,-0.013809204,0.96138227,0.8810773,1.0013139,0.0018943485,1.0013139,"up","HEXIM1",10614.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0045736 // negative regulation of cyclin-dependent protein kinase activity // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0004861 // cyclin-dependent protein kinase inhibitor activity // inferred from direct assay /// 0004861 // cyclin-dependent protein kinase inhibitor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0017069 // snRNA binding // inferred from direct assay /// 0017069 // snRNA binding // inferred from electronic annotation","chr17:43224683-43229585 (+) // 92.36 // q21.31"]
["11756750_a_at",18.55811,15.711587,15.04312,15.018606,15.018606,15.97603,0.27158356,0.031362534,-0.031362295,-0.033715248,-0.033715248,0.05544281,0.72950006,0.38494146,1.0677129,0.09452377,1.0677129,"up","TMEM30B",161291.0,"0070863 // positive regulation of protein exit from endoplasmic reticulum // inferred from direct assay","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr14:61746589-61748194 (-) // 99.53 // q23.1"]
["11760197_at",18.52394,15.584072,17.61724,16.268595,19.385365,18.7122,0.036201477,-0.21311712,-0.036201477,-0.15109968,0.10177851,0.050789833,0.8190051,0.54034936,-1.0508295,-0.07152864,1.0508295,"down","EIF4E2 /// LOC100507948","100507948 /// 9470","0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005845 // mRNA cap binding complex // inferred from direct assay","0000339 // RNA cap binding // traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008135 // translation factor activity, nucleic acid binding // traceable author statement /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction","chr2:233415383-233433919 (+) // 91.65 // q37.1"]
["11730530_at",70.83179,70.92784,75.08687,75.390755,78.84807,86.156136,-0.08707714,-0.08512211,-0.0029139519,0.002913475,0.067601204,0.19547892,0.42543533,0.07994179,-1.1072919,-0.14703564,1.1072919,"down","ZNF684",127396.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:40997232-41013841 (+) // 95.02 // p34.2"]
["11732453_s_at",8.270787,7.09353,6.86832,7.725692,7.539704,6.5997467,0.17751908,-0.044002056,-0.090548515,0.079158306,0.044002056,-0.14809513,0.9492323,0.84529406,1.0158128,0.022634493,1.0158128,"up","HGD",3081.0,"0006520 // cellular amino acid metabolic process // inferred from electronic annotation /// 0006559 // L-phenylalanine catabolic process // inferred from electronic annotation /// 0006559 // L-phenylalanine catabolic process // traceable author statement /// 0006570 // tyrosine metabolic process // inferred from electronic annotation /// 0006572 // tyrosine catabolic process // inferred from electronic annotation /// 0006572 // tyrosine catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005829 // cytosol // traceable author statement","0004411 // homogentisate 1,2-dioxygenase activity // not recorded /// 0004411 // homogentisate 1,2-dioxygenase activity // inferred from electronic annotation /// 0004411 // homogentisate 1,2-dioxygenase activity // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016702 // oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:120347014-120401328 (-) // 92.98 // q13.33"]
["11720345_a_at",292.9184,290.89386,289.20737,288.9221,293.79782,302.24936,0.0050029755,-0.0050029755,-0.013391495,-0.0148153305,0.0093278885,0.050243378,0.7267728,0.3812705,-1.0135256,-0.019382536,1.0135256,"down","USP4",7375.0,"0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0016579 // protein deubiquitination // inferred from direct assay /// 0031397 // negative regulation of protein ubiquitination // inferred from mutant phenotype /// 0031647 // regulation of protein stability // inferred from direct assay /// 0034394 // protein localization at cell surface // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005764 // lysosome // traceable author statement","0004221 // ubiquitin thiolesterase activity // inferred from mutant phenotype /// 0004221 // ubiquitin thiolesterase activity // inferred from electronic annotation /// 0004843 // ubiquitin-specific protease activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0031685 // adenosine receptor binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:49314576-49377594 (-) // 99.76 // p21.31"]
["11715625_a_at",396.53796,422.2424,455.74222,442.66354,418.70746,428.37405,-0.10101223,-0.010399818,0.099746704,0.057739258,-0.022528648,0.010399818,0.9246073,0.7754021,-1.0133215,-0.019092003,1.0133215,"down","SH3BGRL",6451.0,"","0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // traceable author statement","0005070 // SH3/SH2 adaptor activity // traceable author statement /// 0017124 // SH3 domain binding // inferred from electronic annotation","chrX:80457257-80554046 (+) // 94.05 // q21.1"]
["11726141_at",216.40883,195.19539,215.14572,192.39784,186.69716,195.71219,0.1469326,-0.0019073486,0.13848782,-0.022733688,-0.06612635,0.0019073486,0.42046627,0.077197485,1.0893658,0.12348853,1.0893658,"up","FMN2",56776.0,"0007132 // meiotic metaphase I // inferred from sequence or structural similarity /// 0007132 // meiotic metaphase I // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0016043 // cellular component organization // inferred from electronic annotation /// 0016344 // meiotic chromosome movement towards spindle pole // inferred from sequence or structural similarity /// 0016344 // meiotic chromosome movement towards spindle pole // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0040038 // polar body extrusion after meiotic divisions // inferred from sequence or structural similarity /// 0040038 // polar body extrusion after meiotic divisions // inferred from electronic annotation /// 0048477 // oogenesis // inferred from sequence or structural similarity /// 0048477 // oogenesis // inferred from electronic annotation /// 0051295 // establishment of meiotic spindle localization // inferred from sequence or structural similarity /// 0051295 // establishment of meiotic spindle localization // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation","chr1:240255184-240638489 (+) // 98.08 // q43"]
["11745977_a_at",34.352715,39.34451,34.775284,34.940636,36.40505,36.4205,-0.05409813,0.14164019,-0.036459923,-0.029616356,0.029616356,0.030228615,0.975127,0.9206999,1.0048298,0.0069511044,1.0048298,"up","SOX12",6666.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // non-traceable author statement /// 0021510 // spinal cord development // inferred from sequence or structural similarity /// 0045165 // cell fate commitment // inferred from expression pattern /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity","0005634 // nucleus // inferred from electronic annotation","0000976 // transcription regulatory region sequence-specific DNA binding // inferred from sequence or structural similarity /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from sequence or structural similarity /// 0001105 // RNA polymerase II transcription coactivator activity // inferred from sequence or structural similarity /// 0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation","chr20:306214-309161 (+) // 90.48 // p13"]
["11724574_a_at",181.53773,171.27812,176.9938,178.92682,171.07303,174.35774,0.047395706,-0.036533356,0.0108242035,0.026495457,-0.038262367,-0.0108242035,0.87277675,0.65579027,1.0102829,0.014759297,1.0102829,"up","ECE2",9718.0,"0006508 // proteolysis // inferred from electronic annotation /// 0007267 // cell-cell signaling // traceable author statement /// 0007420 // brain development // inferred from sequence or structural similarity /// 0007507 // heart development // inferred from sequence or structural similarity /// 0008152 // metabolic process // inferred from electronic annotation /// 0010002 // cardioblast differentiation // inferred from sequence or structural similarity /// 0016486 // peptide hormone processing // inferred from direct assay /// 0032259 // methylation // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from direct assay","0003824 // catalytic activity // inferred from electronic annotation /// 0004222 // metalloendopeptidase activity // inferred from direct assay /// 0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:183967385-183977406 (+) // 93.77 // q27.1"]
["11729548_x_at",52.751854,54.07364,55.64555,54.135014,65.29658,53.54113,-0.03652191,-8.1825256E-4,0.040522575,8.1825256E-4,0.27126408,-0.015096188,0.75694746,0.42592564,-1.0603946,-0.08460129,1.0603946,"down","AMH",268.0,"0001541 // ovarian follicle development // inferred from electronic annotation /// 0001546 // preantral ovarian follicle growth // inferred from electronic annotation /// 0001655 // urogenital system development // inferred from electronic annotation /// 0001880 // Mullerian duct regression // inferred from direct assay /// 0001880 // Mullerian duct regression // non-traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0007506 // gonadal mesoderm development // inferred from electronic annotation /// 0007530 // sex determination // traceable author statement /// 0007548 // sex differentiation // traceable author statement /// 0007568 // aging // inferred from electronic annotation /// 0008406 // gonad development // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from mutant phenotype /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from electronic annotation","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation","0005102 // receptor binding // inferred from physical interaction /// 0005160 // transforming growth factor beta receptor binding // inferred from electronic annotation /// 0005179 // hormone activity // traceable author statement /// 0008083 // growth factor activity // inferred from electronic annotation","chr19:2248693-2252071 (+) // 95.37 // p13.3"]
["11750295_a_at",65.98379,74.01745,81.06532,64.116066,77.03156,74.34693,-0.16895771,-0.0032038689,0.12801504,-0.21038342,0.054380417,0.0032038689,0.92436993,0.7744688,1.0254219,0.036217555,1.0254219,"up","CLEC11A",6320.0,"0008284 // positive regulation of cell proliferation // inferred from direct assay","0005576 // extracellular region // inferred from direct assay /// 0005576 // extracellular region // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay","0008083 // growth factor activity // inferred from direct assay /// 0008083 // growth factor activity // inferred from electronic annotation /// 0030246 // carbohydrate binding // non-traceable author statement /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr19:51226779-51228975 (+) // 91.51 // q13.33"]
["11757381_x_at",2353.198,2346.5574,2491.7864,2367.562,2404.5945,2348.0425,-0.004389763,-0.008466721,0.078167915,0.004389763,0.026781082,-0.0075540543,0.8780176,0.666884,1.00968,0.013898175,1.00968,"up","GTF2A2",2958.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from direct assay /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // inferred from electronic annotation /// 0006368 // transcription elongation from RNA polymerase II promoter // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0051123 // RNA polymerase II transcriptional preinitiation complex assembly // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005672 // transcription factor TFIIA complex // inferred from direct assay /// 0005672 // transcription factor TFIIA complex // inferred from electronic annotation","0003713 // transcription coactivator activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0017025 // TBP-class protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from physical interaction","chr15:59931064-59934462 (-) // 87.11 // q22.2"]
["11718296_a_at",470.0604,503.04962,426.5058,477.87448,507.4435,493.5916,-0.047128677,0.050725937,-0.1874094,-0.023343086,0.063272476,0.023343086,0.68961734,0.32520005,-1.0587497,-0.08236153,1.0587497,"down","SEMA4B",10509.0,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation","chr15:90728146-90772892 (+) // 95.09 // q26.1"]
["11760592_x_at",80.64772,74.181816,88.91687,85.99983,98.86458,83.11962,-0.06812763,-0.18869591,0.07269573,0.024572372,0.22569227,-0.024572372,0.64894074,0.2728658,-1.0993164,-0.13660662,1.0993164,"down","SLC35E1",79939.0,"0006810 // transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr19:16676163-16683020 (-) // 52.15 // p13.11"]
["11723232_x_at",584.66223,594.64905,614.3929,595.01,596.9558,595.5861,-0.026008606,-0.0015735626,0.045549393,-6.980896E-4,0.004012108,6.980896E-4,0.94576883,0.83590156,1.0032295,0.0046516745,1.0032295,"up","RNF138",51444.0,"0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr18:29671843-29711523 (+) // 95.8 // q12.1"]
["11754985_a_at",100.575455,103.23766,99.88381,100.82687,107.23799,111.073296,-0.020647049,0.017045021,-0.030601978,-0.017045021,0.07189131,0.122587204,0.5634622,0.1786917,-1.0501139,-0.07054584,1.0501139,"down","ZNF180",7733.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:44979620-45004575 (-) // 99.55 // q13.31"]
["200043_PM_at",3806.1694,3786.6326,3806.3682,3810.0435,3863.305,3810.8345,-7.724762E-4,-0.008195877,-6.9618225E-4,6.9618225E-4,0.020724297,9.95636E-4,0.5918202,0.20536487,-1.0074397,-0.010693536,1.0074397,"down","ERH",2079.0,"0006139 // nucleobase-containing compound metabolic process // traceable author statement /// 0006213 // pyrimidine nucleoside metabolic process // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation","0030496 // midbody // inferred from direct assay","","chr14:69846845-69865021 (-) // 97.55 // q24.1"]
["11749650_x_at",7.6396003,7.619306,7.2603374,6.81621,7.1825566,7.103869,0.081229925,0.07739234,0.0077695847,-0.08329725,-0.0077695847,-0.02366209,0.35495433,0.047470964,1.0671085,0.09370688,1.0671085,"up","A2ML1",144568.0,"0010466 // negative regulation of peptidase activity // inferred from direct assay /// 0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // inferred from electronic annotation /// 0052548 // regulation of endopeptidase activity // inferred from direct assay","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation","0004866 // endopeptidase inhibitor activity // inferred from electronic annotation /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0030414 // peptidase inhibitor activity // inferred from direct assay /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation","chr12:8997599-9029052 (+) // 97.95 // p13.31"]
["11725037_a_at",156.54068,162.2074,148.4168,172.2074,156.4817,168.92421,-0.025650501,0.025650978,-0.10253477,0.11195898,-0.02619505,0.08418751,0.5673315,0.18186308,-1.0649817,-0.090828635,1.0649817,"down","SEC23IP",11196.0,"0006886 // intracellular protein transport // traceable author statement /// 0007030 // Golgi organization // traceable author statement","0005737 // cytoplasm // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // traceable author statement /// 0012507 // ER to Golgi transport vesicle membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0046872 // metal ion binding // inferred from electronic annotation","chr10:121652224-121701833 (+) // 95.15 // q26.11"]
["11741427_a_at",272.15982,266.8489,265.58923,258.54367,259.86145,265.84076,0.03457451,0.00614357,-6.828308E-4,-0.039471626,-0.032136917,6.828308E-4,0.43653503,0.08713273,1.0259689,0.03698701,1.0259689,"up","OSBPL1A",114876.0,"0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // non-traceable author statement /// 0016192 // vesicle-mediated transport // non-traceable author statement","0005622 // intracellular // inferred by curator /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from direct assay /// 0005770 // late endosome // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // non-traceable author statement /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation","chr18:21742012-21977846 (-) // 99.79 // q11.2"]
["11728735_a_at",244.37402,259.00296,247.76555,266.9823,278.79947,273.4145,-0.105764866,-0.02188778,-0.08588028,0.02188778,0.08437157,0.056233406,0.2364074,0.015717225,-1.0907662,-0.12534189,1.0907662,"down","ZBTB38",253461.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from sequence or structural similarity /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:141043054-141168630 (+) // 92.23 // q23"]
["AFFX-r2-Ec-bioB-3_at",345.39105,334.77362,352.2004,325.49765,312.71982,330.90353,0.053432465,0.008387566,0.08159828,-0.032151222,-0.08992767,-0.008387566,0.35477063,0.04735015,1.065326,0.091294944,1.065326,"up",0.08159828,"","","0008152 // metabolic process // inferred from electronic annotation /// 0009058 // biosynthetic process // inferred from electronic annotation /// 0009102 // biotin biosynthetic process // inferred from direct assay /// 0009102 // biotin biosynthetic process // inferred from electronic annotation /// 0009102 // biotin biosynthetic process // inferred from mutant phenotype /// 0032259 // methylation // inferred from electronic annotation /// 0051186 // cofactor metabolic process // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004015 // adenosylmethionine-8-amino-7-oxononanoate transaminase activity // inferred from direct assay /// 0004015 // adenosylmethionine-8-amino-7-oxononanoate transaminase activity // inferred from electronic annotation /// 0004076 // biotin synthase activity // inferred from direct assay /// 0004076 // biotin synthase activity // inferred from electronic annotation /// 0004141 // dethiobiotin synthase activity // inferred from direct assay /// 0004141 // dethiobiotin synthase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008483 // transaminase activity // inferred from electronic annotation /// 0008710 // 8-amino-7-oxononanoate synthase activity // inferred from direct assay /// 0008710 // 8-amino-7-oxononanoate synthase activity // inferred from electronic annotation /// 0010340 // carboxyl-O-methyltransferase activity // inferred from mutant phenotype /// 0016740 // transferase activity // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from direct assay /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation /// 0051537 // 2 iron, 2 sulfur cluster binding // inferred from direct assay /// 0051537 // 2 iron, 2 sulfur cluster binding // inferred from electronic annotation /// 0051539 // 4 iron, 4 sulfur cluster binding // inferred from direct assay /// 0051539 // 4 iron, 4 sulfur cluster binding // inferred from electronic annotation"]
["11755655_a_at",12.972622,13.118573,13.725884,13.94476,14.963723,13.725884,-0.081429005,-0.065288305,0.0,0.022824287,0.12457013,0.0,0.455617,0.09835498,-1.0703163,-0.09803722,1.0703163,"down","MICAL3",57553.0,"0006887 // exocytosis // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0030042 // actin filament depolymerization // inferred from sequence or structural similarity /// 0055114 // oxidation-reduction process // inferred from sequence or structural similarity /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation","0003779 // actin binding // inferred from sequence or structural similarity /// 0003779 // actin binding // inferred from electronic annotation /// 0004497 // monooxygenase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016709 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation /// 0071949 // FAD binding // inferred from sequence or structural similarity","chr22:18273602-18298435 (-) // 88.81 // q11.21"]
["11762647_at",10.042862,9.701663,9.888829,9.313315,10.132851,10.448719,0.011149645,-0.038716793,-0.011149406,-0.097654104,0.02401948,0.068305254,0.9475308,0.83999527,-1.007744,-0.011129129,1.007744,"down",-0.097654104,0.02401948,0.068305254,0.011149645,-0.038716793,-0.011149406]
["11746784_a_at",10.1888,10.854665,8.926751,9.824753,10.514973,10.03984,0.010623932,0.10195494,-0.1801529,-0.041867256,0.05608487,-0.010623932,0.93346274,0.8007886,-1.0165792,-0.023722548,1.0165792,"down","C9orf84",158401.0,"","","","chr9:114500148-114557288 (-) // 94.17 // q31.3"]
["11742700_s_at",87.695274,92.07066,90.829605,92.07066,93.27394,98.112465,-0.070242405,0.0,-0.01957941,0.0,0.01873207,0.09169483,0.50224423,0.1286343,-1.0473543,-0.06674962,1.0473543,"down","C1R",715.0,"0006508 // proteolysis // inferred from electronic annotation /// 0006955 // immune response // traceable author statement /// 0006956 // complement activation // traceable author statement /// 0006956 // complement activation // inferred from electronic annotation /// 0006958 // complement activation, classical pathway // traceable author statement /// 0006958 // complement activation, classical pathway // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // not recorded /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // traceable author statement /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr12:7187512-7245065 (-) // 89.76 // p13.31"]
["11757860_s_at",35.815598,27.313261,24.22405,29.363068,28.6852,27.990913,0.33795547,-0.053030968,-0.22619247,0.051370144,0.01767397,-0.01767397,0.99641085,0.9890479,1.0017024,0.0024539959,1.0017024,"up","QKI",9444.0,"0001570 // vasculogenesis // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008366 // axon ensheathment // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0042552 // myelination // inferred from electronic annotation /// 0042692 // muscle cell differentiation // inferred from electronic annotation /// 0042759 // long-chain fatty acid biosynthetic process // inferred from electronic annotation /// 0051028 // mRNA transport // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay","0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0017124 // SH3 domain binding // inferred from electronic annotation","chr6:163990768-163991477 (+) // 98.73 // q26"]
["11733527_at",8.124399,7.860295,6.755587,8.07258,7.880556,8.199292,0.0265975,-0.021080256,-0.23958254,0.01736617,-0.01736617,0.03983569,0.69750404,0.33623812,-1.0653299,-0.09130027,1.0653299,"down","GABRR1",2569.0,"0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006821 // chloride transport // inferred from electronic annotation /// 0007214 // gamma-aminobutyric acid signaling pathway // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0034220 // ion transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0034707 // chloride channel complex // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004890 // GABA-A receptor activity // inferred from electronic annotation /// 0004890 // GABA-A receptor activity // traceable author statement /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005230 // extracellular ligand-gated ion channel activity // inferred from electronic annotation /// 0005254 // chloride channel activity // inferred from electronic annotation /// 0016917 // GABA receptor activity // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr6:89887222-89927496 (-) // 99.81 // q15"]
["11736484_a_at",69.56958,74.665535,63.22005,69.1087,65.71724,70.984406,0.004794121,0.10678053,-0.13327932,-0.0047945976,-0.077390194,0.03384018,0.9727155,0.9135468,1.0061741,0.008879941,1.0061741,"up","AGFG1",3267.0,"0001675 // acrosome assembly // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0007289 // spermatid nucleus differentiation // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0032312 // regulation of ARF GTPase activity // inferred from electronic annotation /// 0045109 // intermediate filament organization // inferred from electronic annotation /// 0051028 // mRNA transport // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005643 // nuclear pore // traceable author statement /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008060 // ARF GTPase activator activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:228336887-228425938 (+) // 85.66 // q36.3"]
["11755566_a_at",53.65906,53.214817,53.023235,52.83774,58.701683,52.49005,0.014595509,0.0026016235,-0.0026016235,-0.007657528,0.14417553,-0.01718235,0.82030725,0.5425547,-1.0244954,-0.034913454,1.0244954,"down","HEATR7A /// LOC100652949 /// LOC377711","100652949 /// 377711 /// 727957","","","","chr8:145294014-145316828 (+) // 98.41 // q24.3 /// chr8:145463067-145485881 (+) // 98.41 // q24.3"]
["11717595_s_at",185.94972,168.0748,176.24449,191.34955,199.68927,182.89546,0.011946678,-0.1338625,-0.065387726,0.05324459,0.11479092,-0.011946678,0.4743655,0.10948965,-1.0825728,-0.11446407,1.0825728,"down","ELF3",1999.0,"0001824 // blastocyst development // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006954 // inflammatory response // inferred from expression pattern /// 0006954 // inflammatory response // inferred from electronic annotation /// 0007275 // multicellular organismal development // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008544 // epidermis development // non-traceable author statement /// 0009653 // anatomical structure morphogenesis // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0030855 // epithelial cell differentiation // inferred from expression pattern /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0060056 // mammary gland involution // inferred from sequence or structural similarity /// 0060056 // mammary gland involution // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0003713 // transcription coactivator activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr1:201979689-201986311 (+) // 91.6 // q32.1"]
["11756971_x_at",11.606633,13.620262,12.701083,10.1301365,11.52615,10.93098,0.005019188,0.23582387,0.13502121,-0.19127679,-0.0050194263,-0.08150768,0.39486134,0.06428478,1.1630309,0.21788938,1.1630309,"up","PKM",5315.0,"0005975 // carbohydrate metabolic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006096 // glycolysis // inferred from electronic annotation /// 0006096 // glycolysis // non-traceable author statement /// 0006096 // glycolysis // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0012501 // programmed cell death // inferred from direct assay /// 0016310 // phosphorylation // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // non-traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004743 // pyruvate kinase activity // inferred from electronic annotation /// 0004743 // pyruvate kinase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0030955 // potassium ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr15:72492848-72521017 (-) // 99.74 // q23"]
["11751674_a_at",36.254185,32.294456,37.86892,33.062675,36.238995,34.072777,0.045066357,-0.1217947,0.107933044,-0.08787775,0.044461727,-0.044461727,0.8654772,0.64107996,1.0278959,0.0396942,1.0278959,"up","STOML1",9399.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0032934 // sterol binding // inferred from electronic annotation","chr15:74276277-74284564 (-) // 99.59 // q24.1"]
["11744418_a_at",243.99326,267.3438,264.60266,270.33057,266.8909,251.7527,-0.12319803,0.008657455,-0.006211281,0.02468586,0.006211281,-0.07803154,0.8763052,0.6635047,-1.0171547,-0.024539107,1.0171547,"down","PPAPDC1B",84513.0,"0008152 // metabolic process // inferred from electronic annotation /// 0046839 // phospholipid dephosphorylation // inferred from direct assay","0005737 // cytoplasm // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0008195 // phosphatidate phosphatase activity // inferred from direct assay /// 0008195 // phosphatidate phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr8:38120647-38127061 (-) // 85.15 // p11.23"]
["11752504_a_at",87.707306,78.043686,86.31723,84.692055,96.60345,92.54068,0.0115242,-0.15689087,-0.0115242,-0.03894663,0.1509018,0.08891487,0.58155656,0.19558594,-1.0861728,-0.119253665,1.0861728,"down","DUSP16",80824.0,"0000188 // inactivation of MAPK activity // not recorded /// 0000188 // inactivation of MAPK activity // traceable author statement /// 0000188 // inactivation of MAPK activity // inferred from electronic annotation /// 0006470 // protein dephosphorylation // not recorded /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0016311 // dephosphorylation // traceable author statement /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation /// 0043409 // negative regulation of MAPK cascade // inferred from electronic annotation /// 0045204 // MAPK export from nucleus // traceable author statement /// 0045209 // MAPK phosphatase export from nucleus, leptomycin B sensitive // traceable author statement","0005634 // nucleus // not recorded /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // not recorded /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0004721 // phosphoprotein phosphatase activity // traceable author statement /// 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0008138 // protein tyrosine/serine/threonine phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0017017 // MAP kinase tyrosine/serine/threonine phosphatase activity // not recorded /// 0017017 // MAP kinase tyrosine/serine/threonine phosphatase activity // inferred from electronic annotation","chr12:12629692-12674059 (-) // 98.6 // p13.2"]
["11722964_a_at",1225.1716,1250.8743,1267.778,1357.6785,1333.9349,1290.2279,-0.061980247,-0.032027245,-0.012661934,0.086177826,0.06072426,0.012661934,0.28628615,0.026596261,-1.0634443,-0.08874441,1.0634443,"down","AMMECR1",9949.0,"0051260 // protein homooligomerization // inferred from electronic annotation","","","chrX:109437413-109561467 (-) // 93.51 // q23"]
["11725662_a_at",16.745111,18.591131,16.415972,18.30164,14.527708,19.85794,-0.06411648,0.08675814,-0.09275627,0.06411648,-0.26904917,0.1818595,0.97484225,0.9196741,-1.0109282,-0.01568047,1.0109282,"down","SLC16A14",151473.0,"0006810 // transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0015293 // symporter activity // inferred from electronic annotation","chr2:230899695-230933715 (-) // 96.71 // q36.3"]
["11755212_a_at",8.588898,8.770033,9.658618,9.128791,8.823058,8.717591,-0.034457445,-0.004348278,0.1348865,0.05349326,0.0043485165,-0.013000727,0.9244638,0.7749253,1.0119092,0.017079907,1.0119092,"up","SVOPL",136306.0,"0006810 // transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0022857 // transmembrane transporter activity // inferred from electronic annotation","chr7:138279041-138348316 (-) // 80.42 // q34"]
["11739042_x_at",14.211655,14.211655,12.363017,14.291964,14.293142,15.840895,-0.0040647984,-0.0040647984,-0.2051084,0.0040647984,0.0041840076,0.15251493,0.59476626,0.20880125,-1.0902562,-0.12466721,1.0902562,"down","LIMK2",3985.0,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0016310 // phosphorylation // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0042325 // regulation of phosphorylation // inferred from electronic annotation","0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005801 // cis-Golgi network // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr22:31644296-31676059 (+) // 99.13 // q12.2"]
["11759991_at",27.281233,27.598146,22.420904,21.817522,25.159134,26.380522,0.08263111,0.09929371,-0.20043325,-0.23979044,-0.034195423,0.034195423,0.84470004,0.5937098,1.0524565,0.0737606,1.0524565,"up","CFDP1",10428.0,"0006916 // anti-apoptosis // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation","","","chr16:75428579-75467359 (-) // 81.66 // q23.1"]
["11726893_a_at",253.03496,242.94447,254.73454,245.04494,260.70728,238.00859,0.023145676,-0.035564423,0.032803535,-0.023145199,0.06623936,-0.06517792,0.9201086,0.76503414,1.0098606,0.014156208,1.0098606,"up","ST7 /// ST7-OT3","7982 /// 93655","","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr7:116593394-116870077 (+) // 93.29 // q31.2"]
["11745921_a_at",11.556228,12.405212,11.8890915,12.259602,10.558032,11.600635,-0.023250818,0.07902527,0.017717123,0.061990976,-0.15358019,-0.017717361,0.75920796,0.4307063,1.0431399,0.060932703,1.0431399,"up","ZSCAN30",1.00101467E8,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016032 // viral reproduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr18:32830910-32870196 (-) // 83.68 // q12.2"]
["11739368_a_at",11.167561,12.128486,10.576218,11.496318,10.625499,12.946962,-0.02092886,0.09815645,-0.099419355,0.020929098,-0.0927124,0.19237065,0.87550586,0.6614788,-1.0335392,-0.047593076,1.0335392,"down","DMXL2",23312.0,"","0008021 // synaptic vesicle // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030672 // synaptic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0017137 // Rab GTPase binding // inferred from direct assay","chr15:51739907-51915030 (-) // 99.99 // q21.2"]
["11735874_x_at",99.32561,102.09352,109.05188,95.85228,90.873985,109.70909,-0.019826889,0.019826889,0.11495066,-0.07118034,-0.14812517,0.1236186,0.7881325,0.47987306,1.0498713,0.07021252,1.0498713,"up","ADAMTSL4",54507.0,"0006915 // apoptotic process // inferred from electronic annotation /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from direct assay","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005614 // interstitial matrix // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from electronic annotation","0002020 // protease binding // inferred from physical interaction /// 0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation","chr1:150521897-150531221 (+) // 99.24 // q21.3"]
["11754667_a_at",33.068237,33.097027,37.89911,34.266994,34.53951,35.628166,-0.05708742,-0.05583191,0.13963032,-0.0057139397,0.0057139397,0.050484657,0.9722602,0.9123,-1.005508,-0.007924482,1.005508,"down","CPNE6",9362.0,"0006629 // lipid metabolic process // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007399 // nervous system development // traceable author statement /// 0016192 // vesicle-mediated transport // traceable author statement","0005624 // membrane fraction // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation","0001786 // phosphatidylserine binding // inferred from electronic annotation /// 0005215 // transporter activity // traceable author statement /// 0005509 // calcium ion binding // traceable author statement","chr14:24540056-24547295 (+) // 99.17 // q11.2"]
["11750005_a_at",12.853611,13.575227,14.729221,12.9239645,12.997555,11.709509,-0.01197052,0.066832066,0.18453693,-0.004095793,0.004095793,-0.14646363,0.54596543,0.1621965,1.093248,0.12862071,1.093248,"up","CNTROB",116840.0,"0000910 // cytokinesis // inferred from mutant phenotype /// 0007049 // cell cycle // inferred from electronic annotation /// 0007099 // centriole replication // inferred from mutant phenotype /// 0051299 // centrosome separation // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005814 // centriole // inferred from direct assay /// 0005814 // centriole // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from physical interaction","chr17:7840520-7847914 (+) // 100.0 // p13.1"]
["11740385_x_at",32.91959,36.44885,30.700218,38.683792,34.50865,33.937286,-0.055968285,0.090958595,-0.1566658,0.17681456,0.012043476,-0.012043476,0.7046089,0.34598896,-1.0713996,-0.09949662,1.0713996,"down","METTL20",254013.0,"0006479 // protein methylation // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0008168 // methyltransferase activity // inferred from electronic annotation /// 0008276 // protein methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr12:31812608-31826879 (+) // 51.89 // p11.21"]
["11754053_x_at",3804.4663,3828.6482,3843.4214,3724.7908,3626.384,3665.4949,0.015267372,0.02440834,0.029964447,-0.015267372,-0.053894997,-0.03841877,0.18070292,0.00794588,1.0417967,0.05907375,1.0417967,"up","TPI1",7167.0,"0005975 // carbohydrate metabolic process // traceable author statement /// 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006006 // glucose metabolic process // traceable author statement /// 0006006 // glucose metabolic process // inferred from electronic annotation /// 0006094 // gluconeogenesis // inferred from electronic annotation /// 0006094 // gluconeogenesis // traceable author statement /// 0006096 // glycolysis // inferred from electronic annotation /// 0006096 // glycolysis // traceable author statement /// 0006098 // pentose-phosphate shunt // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0019682 // glyceraldehyde-3-phosphate metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement","0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004807 // triose-phosphate isomerase activity // not recorded /// 0004807 // triose-phosphate isomerase activity // non-traceable author statement /// 0004807 // triose-phosphate isomerase activity // traceable author statement /// 0004807 // triose-phosphate isomerase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation","chr12:6976694-6979855 (+) // 97.57 // p13.31"]
["11740619_at",32.679153,35.69934,30.26365,31.400702,38.88866,34.775295,-0.044846058,0.0826807,-0.15563059,-0.10241985,0.20613289,0.044846058,0.7856956,0.47452313,-1.0634742,-0.088785,1.0634742,"down","ADRA1D",146.0,"0001986 // negative regulation of the force of heart contraction involved in baroreceptor response to increased systemic arterial blood pressure // inferred from electronic annotation /// 0001994 // norepinephrine-epinephrine vasoconstriction involved in regulation of systemic arterial blood pressure // inferred from electronic annotation /// 0006259 // DNA metabolic process // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007188 // adenylate cyclase-modulating G-protein coupled receptor signaling pathway // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0007275 // multicellular organismal development // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0071875 // adrenergic receptor signaling pathway // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004935 // adrenergic receptor activity // inferred from electronic annotation /// 0004937 // alpha1-adrenergic receptor activity // inferred from electronic annotation /// 0004937 // alpha1-adrenergic receptor activity // traceable author statement","chr20:4200906-4229662 (-) // 89.61 // p13"]
["11726022_a_at",505.81088,521.5407,516.53937,528.44324,530.0322,534.15314,-0.053666115,-0.009484291,-0.023386002,0.009484291,0.01381588,0.024989128,0.3043959,0.03143452,-1.0316416,-0.044941857,1.0316416,"down","FAM177A1",283635.0,"","","","chr14:35514112-35552584 (+) // 86.56 // q13.2"]
["11756505_s_at",45.87759,47.76146,42.682594,41.392235,41.56822,43.71854,0.086843014,0.14490032,-0.017298698,-0.06158638,-0.0554657,0.017298698,0.49603933,0.123369634,1.0752951,0.104732625,1.0752951,"up","CCDC144A /// USP32 /// USP32P1 /// USP32P2 /// USP6","162632 /// 220594 /// 84669 /// 9098 /// 9720","0006464 // cellular protein modification process // non-traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0016579 // protein deubiquitination // traceable author statement /// 0016579 // protein deubiquitination // inferred from direct assay /// 0032313 // regulation of Rab GTPase activity // inferred from electronic annotation /// 0032851 // positive regulation of Rab GTPase activity // inferred from electronic annotation /// 0060627 // regulation of vesicle-mediated transport // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005764 // lysosome // traceable author statement /// 0005768 // endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0055037 // recycling endosome // inferred from direct assay","0003676 // nucleic acid binding // traceable author statement /// 0004197 // cysteine-type endopeptidase activity // traceable author statement /// 0004221 // ubiquitin thiolesterase activity // inferred from direct assay /// 0004221 // ubiquitin thiolesterase activity // inferred from electronic annotation /// 0004843 // ubiquitin-specific protease activity // inferred from direct assay /// 0005097 // Rab GTPase activator activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr17:20295053-20334331 (+) // 92.61 // p11.2 /// chr17:16665624-16705753 (+) // 90.52 // p11.2 /// chr17:18416591-18456689 (-) // 91.75 // p11.2"]
["11757430_s_at",1779.6615,1751.6548,1739.1709,1766.373,1796.4014,1809.7626,0.0054063797,-0.01747799,-0.027796745,-0.0054063797,0.018913269,0.029603958,0.497687,0.12456888,-1.0193572,-0.02765969,1.0193572,"down","TMED5",50999.0,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0090161 // Golgi ribbon formation // inferred from mutant phenotype","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005801 // cis-Golgi network // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0033116 // endoplasmic reticulum-Golgi intermediate compartment membrane // inferred from electronic annotation /// 0070971 // endoplasmic reticulum exit site // inferred from direct assay","","chr1:93617410-93618009 (-) // 99.17 // p22.1"]
["11750848_a_at",392.32144,370.5716,409.29797,389.7338,374.16632,355.1565,0.038951874,-0.0433321,0.10006714,0.02940464,-0.02940464,-0.10462952,0.67476004,0.30524868,1.0473707,0.06677211,1.0473707,"up","TOMM70A",9868.0,"0006626 // protein targeting to mitochondrion // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005742 // mitochondrial outer membrane translocase complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008320 // protein transmembrane transporter activity // traceable author statement","chr3:100084237-100120283 (-) // 100.0 // q12.2"]
["11734264_at",6.1935167,7.7365413,6.4369297,6.3245177,6.525604,6.0149093,-0.04290533,0.27802467,0.012708664,-0.012708664,0.032447338,-0.085121155,0.7232232,0.37541088,1.0750498,0.104403436,1.0750498,"up","CERS3",204219.0,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006665 // sphingolipid metabolic process // traceable author statement /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0030148 // sphingolipid biosynthetic process // traceable author statement /// 0030148 // sphingolipid biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0050291 // sphingosine N-acyltransferase activity // inferred from electronic annotation","chr15:100940599-101069282 (-) // 88.63 // q26.3"]
["11749290_x_at",42.983345,43.00924,47.810894,45.80017,41.101665,33.42741,-4.3439865E-4,4.3439865E-4,0.1531272,0.09114075,-0.065015316,-0.36318064,0.6832415,0.3160865,1.1199188,0.16339417,1.1199188,"up","SH3GL1",6455.0,"0006897 // endocytosis // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007417 // central nervous system development // traceable author statement","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008289 // lipid binding // inferred from electronic annotation","chr19:4361312-4400512 (-) // 92.59 // p13.3"]
["11752401_x_at",12.603433,12.8971,11.91049,12.501712,12.298154,12.91726,0.0058455467,0.039075613,-0.07573819,-0.0058455467,-0.029529333,0.041328907,0.92434746,0.7743784,-1.0085322,-0.012257098,1.0085322,"down","POTEG /// POTEH","23784 /// 404785","","","","chr22:16256443-16287937 (-) // 87.52 // q11.1"]
["11763719_a_at",62.416424,66.52441,63.207367,64.04069,61.20738,66.325195,-0.02761507,0.064342976,-0.009448051,0.009448051,-0.055835247,0.060016632,0.9755149,0.9221943,1.0031589,0.004550185,1.0031589,"up","RPL18",6141.0,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral infectious cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // traceable author statement","chr19:49118590-49122888 (-) // 91.24 // q13.33"]
["11736959_a_at",10.001454,8.858243,9.97828,9.2025585,9.661605,11.542859,0.026610851,-0.14850664,0.02326417,-0.09349203,-0.023263931,0.23340178,0.831843,0.5662999,-1.0509974,-0.07175907,1.0509974,"down","TNFSF15",9966.0,"0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from electronic annotation /// 0006955 // immune response // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0007250 // activation of NF-kappaB-inducing kinase activity // inferred from direct assay /// 0042107 // cytokine metabolic process // inferred from direct assay /// 0050715 // positive regulation of cytokine secretion // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0005102 // receptor binding // traceable author statement /// 0005123 // death receptor binding // inferred from electronic annotation /// 0005125 // cytokine activity // inferred from electronic annotation /// 0005164 // tumor necrosis factor receptor binding // inferred from electronic annotation","chr9:117551612-117568412 (-) // 81.01 // q32"]
["11744496_at",9.722644,10.89262,8.202266,8.717882,9.056737,10.533149,0.051178694,0.21510911,-0.19414783,-0.10619235,-0.051178932,0.1666944,0.96484864,0.8923127,1.0146196,0.02093892,1.0146196,"up","GDEP",118425.0,"","","","chr4:80782441-80784399 (+) // 80.22 // q21.21"]
["11724781_a_at",178.8859,178.66786,205.30295,173.19232,188.85046,166.46979,8.792877E-4,-8.7976456E-4,0.19959402,-0.045785427,0.07908392,-0.10290003,0.7088889,0.35328582,1.0641723,0.08973171,1.0641723,"up","HERC4",26091.0,"0006464 // cellular protein modification process // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from sequence or structural similarity /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0042787 // protein ubiquitination involved in ubiquitin-dependent protein catabolic process // not recorded","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // not recorded /// 0005737 // cytoplasm // not recorded /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation","0004842 // ubiquitin-protein ligase activity // not recorded /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation","chr10:69681661-69835105 (-) // 95.65 // q21.3"]
["11742928_a_at",587.624,581.63855,611.1673,528.3021,548.738,546.1271,0.056773186,0.042002678,0.11344719,-0.096756935,-0.042002678,-0.048883438,0.18465985,0.008639516,1.096791,0.13328868,1.096791,"up","AP3D1",8943.0,"0006726 // eye pigment biosynthetic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0019882 // antigen processing and presentation // inferred from electronic annotation /// 0033365 // protein localization to organelle // inferred from electronic annotation /// 0048007 // antigen processing and presentation, exogenous lipid antigen via MHC class Ib // inferred from electronic annotation /// 0048499 // synaptic vesicle membrane organization // inferred from electronic annotation /// 0051138 // positive regulation of NK T cell differentiation // inferred from electronic annotation /// 0061088 // regulation of sequestering of zinc ion // inferred from mutant phenotype","0000139 // Golgi membrane // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from direct assay /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030117 // membrane coat // inferred from electronic annotation","0005215 // transporter activity // traceable author statement /// 0008565 // protein transporter activity // inferred from electronic annotation","chr19:2100992-2151556 (-) // 93.16 // p13.3"]
["11754610_a_at",72.12274,71.620995,62.4104,75.28254,70.67712,73.37402,0.005036354,-0.005035877,-0.2036314,0.066896915,-0.02417469,0.029851437,0.6503935,0.27523613,-1.0658971,-0.09206818,1.0658971,"down","FICD",11153.0,"0018117 // protein adenylylation // inferred from direct assay /// 0034259 // negative regulation of Rho GTPase activity // traceable author statement","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016779 // nucleotidyltransferase activity // inferred from electronic annotation /// 0070733 // protein adenylyltransferase activity // inferred from direct assay","chr12:108909092-108913941 (+) // 99.96 // q23.3"]
["11740677_a_at",2291.5808,2271.6543,2410.0066,2155.373,2134.828,2141.5898,0.050502777,0.037902832,0.1231966,-0.037902832,-0.05172062,-0.04715824,0.21589889,0.012461336,1.0838221,0.11612801,1.0838221,"up","GDI2",2665.0,"0007165 // signal transduction // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0032851 // positive regulation of Rab GTPase activity // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation","0005093 // Rab GDP-dissociation inhibitor activity // inferred from electronic annotation /// 0005093 // Rab GDP-dissociation inhibitor activity // traceable author statement /// 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005097 // Rab GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr10:5807186-5855512 (-) // 96.45 // p15.1"]
["11758831_at",500.1209,525.09204,523.7176,492.3123,477.05984,496.8994,0.00466156,0.07495499,0.07117367,-0.01804161,-0.06344509,-0.00466156,0.36735478,0.052492432,1.0562706,0.07897948,1.0562706,"up","POLR2C",5432.0,"0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006283 // transcription-coupled nucleotide-excision repair // traceable author statement /// 0006289 // nucleotide-excision repair // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from direct assay /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006368 // transcription elongation from RNA polymerase II promoter // traceable author statement /// 0006370 // 7-methylguanosine mRNA capping // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0050434 // positive regulation of viral transcription // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005665 // DNA-directed RNA polymerase II, core complex // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003899 // DNA-directed RNA polymerase activity // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation","chr16:57496298-57506182 (+) // 91.48 // q21"]
["11730753_at",42.777077,44.342796,46.544193,51.166,48.08366,49.232597,-0.14523602,-0.09337425,-0.023472786,0.113111496,0.023472786,0.05753994,0.28237224,0.025719661,-1.111162,-0.15206909,1.111162,"down","AGPAT5",55326.0,"0006639 // acylglycerol metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008654 // phospholipid biosynthetic process // non-traceable author statement /// 0008654 // phospholipid biosynthetic process // inferred from electronic annotation /// 0016024 // CDP-diacylglycerol biosynthetic process // inferred from electronic annotation /// 0019432 // triglyceride biosynthetic process // traceable author statement /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003841 // 1-acylglycerol-3-phosphate O-acyltransferase activity // non-traceable author statement /// 0003841 // 1-acylglycerol-3-phosphate O-acyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation","chr8:6565865-6619019 (+) // 93.39 // p23.1"]
["11736399_at",20.524218,17.392826,19.805717,21.033682,16.238157,15.775257,0.14512253,-0.09371233,0.09371233,0.1804967,-0.19281673,-0.23454118,0.7609513,0.4345229,1.0947953,0.1306612,1.0947953,"up","RFT1",91869.0,"0006488 // dolichol-linked oligosaccharide biosynthetic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // inferred from electronic annotation /// 0008643 // carbohydrate transport // inferred from electronic annotation /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005319 // lipid transporter activity // inferred from electronic annotation","chr3:53122260-53164480 (-) // 84.32 // p21.1"]
["11762379_at",8.736612,8.185116,9.00796,9.373516,8.348608,8.23996,0.032768965,-0.061301947,0.076895714,0.13428569,-0.032768965,-0.05166745,0.9981676,0.9948225,-1.0003436,-4.9556885E-4,1.0003436,"down","NOS1",4842.0,"0001666 // response to hypoxia // inferred from expression pattern /// 0002028 // regulation of sodium ion transport // inferred from electronic annotation /// 0006527 // arginine catabolic process // inferred by curator /// 0006809 // nitric oxide biosynthetic process // inferred from electronic annotation /// 0006809 // nitric oxide biosynthetic process // inferred from sequence or structural similarity /// 0006941 // striated muscle contraction // inferred from electronic annotation /// 0007520 // myoblast fusion // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0009408 // response to heat // inferred from direct assay /// 0010523 // negative regulation of calcium ion transport into cytosol // traceable author statement /// 0018119 // peptidyl-cysteine S-nitrosylation // inferred from electronic annotation /// 0033555 // multicellular organismal response to stress // inferred from mutant phenotype /// 0035066 // positive regulation of histone acetylation // inferred from electronic annotation /// 0042136 // neurotransmitter biosynthetic process // traceable author statement /// 0042738 // exogenous drug catabolic process // inferred from electronic annotation /// 0043267 // negative regulation of potassium ion transport // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045909 // positive regulation of vasodilation // inferred from direct assay /// 0045909 // positive regulation of vasodilation // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0051346 // negative regulation of hydrolase activity // inferred from electronic annotation /// 0051612 // negative regulation of serotonin uptake // inferred from electronic annotation /// 0051926 // negative regulation of calcium ion transport // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0055117 // regulation of cardiac muscle contraction // traceable author statement /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation","0001917 // photoreceptor inner segment // inferred from sequence or structural similarity /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016529 // sarcoplasmic reticulum // inferred from direct assay /// 0042383 // sarcolemma // inferred from direct assay /// 0042383 // sarcolemma // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity","0004517 // nitric-oxide synthase activity // inferred from electronic annotation /// 0004517 // nitric-oxide synthase activity // inferred from sequence or structural similarity /// 0005506 // iron ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0010181 // FMN binding // inferred from sequence or structural similarity /// 0010181 // FMN binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0020037 // heme binding // inferred from sequence or structural similarity /// 0020037 // heme binding // inferred from electronic annotation /// 0034617 // tetrahydrobiopterin binding // non-traceable author statement /// 0034618 // arginine binding // traceable author statement /// 0046870 // cadmium ion binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050660 // flavin adenine dinucleotide binding // inferred from sequence or structural similarity /// 0050660 // flavin adenine dinucleotide binding // inferred from electronic annotation /// 0050661 // NADP binding // inferred from sequence or structural similarity /// 0050661 // NADP binding // inferred from electronic annotation","chr12:117645952-117799411 (-) // 99.68 // q24.22"]
["11718763_a_at",1815.7145,1824.3214,1866.5414,1777.0787,1865.4547,1706.3796,-0.003411293,0.003411293,0.036418915,-0.034440994,0.035578728,-0.09300995,0.69732994,0.3360894,1.0300852,0.042763676,1.0300852,"up","POMP",51371.0,"0043248 // proteasome assembly // inferred from mutant phenotype","0000502 // proteasome complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","","chr13:29233140-29253091 (+) // 97.05 // q12.3"]
["11733684_a_at",10.839353,10.629239,10.282844,10.915582,10.630006,9.401822,0.028188229,-5.197525E-5,-0.047851086,0.038298607,5.221367E-5,-0.17707801,0.8482246,0.6009684,1.0278792,0.039670777,1.0278792,"up","FRMD7",90167.0,"0007399 // nervous system development // inferred from electronic annotation /// 0010975 // regulation of neuron projection development // inferred from sequence or structural similarity /// 0010975 // regulation of neuron projection development // inferred from electronic annotation","0005856 // cytoskeleton // inferred from electronic annotation /// 0030426 // growth cone // inferred from sequence or structural similarity /// 0030426 // growth cone // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043005 // neuron projection // inferred from sequence or structural similarity /// 0043005 // neuron projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from sequence or structural similarity /// 0043025 // neuronal cell body // inferred from electronic annotation","","chrX:131211017-131262050 (-) // 96.34 // q26.2"]
["11720765_s_at",530.102,518.2162,527.2753,553.9409,513.1083,543.0617,0.003856659,-0.028859138,-0.003856659,0.06731892,-0.043149948,0.038702965,0.7569539,0.42605188,-1.0214206,-0.030577058,1.0214206,"down","TOR1A",1861.0,"0006457 // protein folding // traceable author statement /// 0006986 // response to unfolded protein // traceable author statement /// 0051085 // chaperone mediated protein folding requiring cofactor // inferred from electronic annotation /// 0051260 // protein homooligomerization // inferred from direct assay","0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // inferred from direct assay /// 0005788 // endoplasmic reticulum lumen // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0005524 // ATP binding // traceable author statement /// 0051082 // unfolded protein binding // traceable author statement","chr9:132574739-132586529 (-) // 98.21 // q34.11"]
["11728654_x_at",11.0945635,11.941229,11.457637,12.096316,12.078227,10.068783,-0.076277494,0.02982068,-0.02982068,0.048437595,0.046278,-0.21624112,0.9603779,0.8791295,1.0105094,0.015082701,1.0105094,"up","IGFBP5",3488.0,"0001558 // regulation of cell growth // inferred from electronic annotation /// 0001649 // osteoblast differentiation // inferred from electronic annotation /// 0006006 // glucose metabolic process // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0014912 // negative regulation of smooth muscle cell migration // inferred from direct assay /// 0017148 // negative regulation of translation // inferred from direct assay /// 0030336 // negative regulation of cell migration // inferred from direct assay /// 0031069 // hair follicle morphogenesis // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0042593 // glucose homeostasis // inferred from electronic annotation /// 0043569 // negative regulation of insulin-like growth factor receptor signaling pathway // inferred from direct assay /// 0043569 // negative regulation of insulin-like growth factor receptor signaling pathway // inferred from electronic annotation /// 0048630 // skeletal muscle tissue growth // inferred from electronic annotation /// 0048662 // negative regulation of smooth muscle cell proliferation // inferred from direct assay /// 0051146 // striated muscle cell differentiation // inferred from electronic annotation /// 0051897 // positive regulation of protein kinase B signaling cascade // inferred from electronic annotation /// 0060056 // mammary gland involution // inferred from electronic annotation /// 0071320 // cellular response to cAMP // inferred from direct assay /// 0071407 // cellular response to organic cyclic compound // inferred from direct assay","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0016942 // insulin-like growth factor binding protein complex // inferred by curator","0001968 // fibronectin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005520 // insulin-like growth factor binding // inferred from electronic annotation /// 0019838 // growth factor binding // inferred from electronic annotation /// 0031994 // insulin-like growth factor I binding // inferred from physical interaction","chr2:217536827-217560272 (-) // 94.34 // q35"]
["11721851_x_at",251.83069,244.46725,245.0643,244.2902,226.11401,250.65558,0.041053295,-0.001760006,0.0017595291,-0.0028047562,-0.11434984,0.034305573,0.75727606,0.4267238,1.029041,0.041300535,1.029041,"up","CHCHD6",84303.0,"0006974 // response to DNA damage stimulus // inferred from direct assay /// 0042407 // cristae formation // inferred from mutant phenotype","0005739 // mitochondrion // inferred from mutant phenotype /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from direct assay /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr3:126423062-126679241 (+) // 90.89 // q21.3"]
["11732003_a_at",10.49348,10.041169,10.250818,10.473196,10.570307,10.519629,0.001395464,-0.062170267,-0.032358408,-0.0013957024,0.011919737,0.004986286,0.49900088,0.12575372,-1.0254197,-0.036214538,1.0254197,"down","CRHR1",1394.0,"0001666 // response to hypoxia // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0006955 // immune response // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007188 // adenylate cyclase-modulating G-protein coupled receptor signaling pathway // traceable author statement /// 0007188 // adenylate cyclase-modulating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007189 // adenylate cyclase-activating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007190 // activation of adenylate cyclase activity // traceable author statement /// 0007200 // phospholipase C-activating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007204 // elevation of cytosolic calcium ion concentration // inferred from electronic annotation /// 0007218 // neuropeptide signaling pathway // inferred from electronic annotation /// 0007565 // female pregnancy // non-traceable author statement /// 0007567 // parturition // traceable author statement /// 0007610 // behavior // inferred from electronic annotation /// 0007613 // memory // inferred from electronic annotation /// 0008542 // visual learning // inferred from electronic annotation /// 0009755 // hormone-mediated signaling pathway // inferred from electronic annotation /// 0030855 // epithelial cell differentiation // inferred from electronic annotation /// 0032099 // negative regulation of appetite // inferred from electronic annotation /// 0042755 // eating behavior // inferred from electronic annotation /// 0043306 // positive regulation of mast cell degranulation // inferred from electronic annotation /// 0043526 // neuroprotection // inferred from electronic annotation /// 0048167 // regulation of synaptic plasticity // inferred from electronic annotation /// 0048266 // behavioral response to pain // inferred from electronic annotation /// 0060291 // long-term synaptic potentiation // inferred from electronic annotation /// 0071376 // cellular response to corticotropin-releasing hormone stimulus // traceable author statement /// 0071376 // cellular response to corticotropin-releasing hormone stimulus // inferred from electronic annotation","0005771 // multivesicular body // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0031982 // vesicle // inferred from electronic annotation /// 0033267 // axon part // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0015056 // corticotrophin-releasing factor receptor activity // inferred from electronic annotation /// 0015056 // corticotrophin-releasing factor receptor activity // traceable author statement /// 0042277 // peptide binding // inferred from electronic annotation /// 0043404 // corticotropin-releasing hormone receptor activity // inferred from electronic annotation /// 0051424 // corticotropin-releasing hormone binding // inferred from electronic annotation","chr17:43861645-43913191 (+) // 96.83 // q21.31"]
["11718259_at",28.026777,28.903547,29.449453,27.174383,26.119797,26.876598,0.022279263,0.06672001,0.09371424,-0.022279263,-0.0793829,-0.03817606,0.23832183,0.016157348,1.0773726,0.10751721,1.0773726,"up","NOTCH1",4851.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001708 // cell fate specification // inferred from electronic annotation /// 0001837 // epithelial to mesenchymal transition // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0002040 // sprouting angiogenesis // inferred from electronic annotation /// 0002052 // positive regulation of neuroblast proliferation // inferred from electronic annotation /// 0002437 // inflammatory response to antigenic stimulus // inferred from electronic annotation /// 0003180 // aortic valve morphogenesis // inferred from mutant phenotype /// 0003219 // cardiac right ventricle formation // inferred from electronic annotation /// 0003264 // regulation of cardioblast proliferation // inferred from electronic annotation /// 0003270 // Notch signaling pathway involved in regulation of secondary heart field cardioblast proliferation // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006955 // immune response // non-traceable author statement /// 0006959 // humoral immune response // inferred from electronic annotation /// 0007219 // Notch signaling pathway // inferred from mutant phenotype /// 0007219 // Notch signaling pathway // traceable author statement /// 0007219 // Notch signaling pathway // inferred from electronic annotation /// 0007220 // Notch receptor processing // traceable author statement /// 0007221 // positive regulation of transcription of Notch receptor target // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0007368 // determination of left/right symmetry // inferred from electronic annotation /// 0007386 // compartment pattern specification // inferred from electronic annotation /// 0007409 // axonogenesis // inferred from electronic annotation /// 0007440 // foregut morphogenesis // inferred from electronic annotation /// 0007492 // endoderm development // inferred from electronic annotation /// 0007507 // heart development // inferred from mutant phenotype /// 0007507 // heart development // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0009912 // auditory receptor cell fate commitment // inferred from electronic annotation /// 0010001 // glial cell differentiation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0010718 // positive regulation of epithelial to mesenchymal transition // inferred from mutant phenotype /// 0010812 // negative regulation of cell-substrate adhesion // inferred from direct assay /// 0010832 // negative regulation of myotube differentiation // inferred from sequence or structural similarity /// 0014807 // regulation of somitogenesis // inferred from electronic annotation /// 0021515 // cell differentiation in spinal cord // inferred from electronic annotation /// 0021915 // neural tube development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0030216 // keratinocyte differentiation // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0030326 // embryonic limb morphogenesis // inferred from electronic annotation /// 0030513 // positive regulation of BMP signaling pathway // inferred from sequence or structural similarity /// 0030514 // negative regulation of BMP signaling pathway // inferred from sequence or structural similarity /// 0030900 // forebrain development // inferred from electronic annotation /// 0031069 // hair follicle morphogenesis // inferred from electronic annotation /// 0031100 // organ regeneration // inferred from electronic annotation /// 0031960 // response to corticosteroid stimulus // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0035116 // embryonic hindlimb morphogenesis // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042246 // tissue regeneration // inferred from electronic annotation /// 0042640 // anagen // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043086 // negative regulation of catalytic activity // inferred from sequence or structural similarity /// 0045165 // cell fate commitment // inferred from electronic annotation /// 0045596 // negative regulation of cell differentiation // inferred from electronic annotation /// 0045603 // positive regulation of endothelial cell differentiation // inferred from electronic annotation /// 0045618 // positive regulation of keratinocyte differentiation // inferred from electronic annotation /// 0045662 // negative regulation of myoblast differentiation // inferred from mutant phenotype /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0045668 // negative regulation of osteoblast differentiation // inferred from sequence or structural similarity /// 0045687 // positive regulation of glial cell differentiation // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0045955 // negative regulation of calcium ion-dependent exocytosis // inferred from electronic annotation /// 0046427 // positive regulation of JAK-STAT cascade // inferred from sequence or structural similarity /// 0046533 // negative regulation of photoreceptor cell differentiation // inferred from electronic annotation /// 0048103 // somatic stem cell division // inferred from electronic annotation /// 0048663 // neuron fate commitment // inferred from electronic annotation /// 0048708 // astrocyte differentiation // inferred from electronic annotation /// 0048709 // oligodendrocyte differentiation // inferred from electronic annotation /// 0048711 // positive regulation of astrocyte differentiation // inferred from sequence or structural similarity /// 0048715 // negative regulation of oligodendrocyte differentiation // inferred from sequence or structural similarity /// 0048754 // branching morphogenesis of a tube // inferred from electronic annotation /// 0050678 // regulation of epithelial cell proliferation // inferred from electronic annotation /// 0050679 // positive regulation of epithelial cell proliferation // inferred from electronic annotation /// 0050767 // regulation of neurogenesis // inferred from electronic annotation /// 0050768 // negative regulation of neurogenesis // inferred from sequence or structural similarity /// 0050793 // regulation of developmental process // inferred from electronic annotation /// 0060253 // negative regulation of glial cell proliferation // inferred from sequence or structural similarity /// 0060528 // secretory columnal luminar epithelial cell differentiation involved in prostate glandular acinus development // inferred from electronic annotation /// 0060548 // negative regulation of cell death // inferred from electronic annotation /// 0060740 // prostate gland epithelium morphogenesis // inferred from electronic annotation /// 0060768 // regulation of epithelial cell proliferation involved in prostate gland development // inferred from electronic annotation /// 0061419 // positive regulation of transcription from RNA polymerase II promoter in response to hypoxia // inferred from sequence or structural similarity /// 0072602 // interleukin-4 secretion // inferred from electronic annotation /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from electronic annotation /// 0097150 // neuronal stem cell maintenance // inferred from expression pattern /// 2000737 // negative regulation of stem cell differentiation // inferred from mutant phenotype /// 2000811 // negative regulation of anoikis // inferred from mutant phenotype /// 2000974 // negative regulation of pro-B cell differentiation // inferred from sequence or structural similarity","0000139 // Golgi membrane // traceable author statement /// 0001669 // acrosomal vesicle // inferred from electronic annotation /// 0002193 // MAML1-RBP-Jkappa- ICN1 complex // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0001047 // core promoter binding // inferred from sequence or structural similarity /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0004857 // enzyme inhibitor activity // inferred from sequence or structural similarity /// 0004872 // receptor activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from sequence or structural similarity /// 0031490 // chromatin DNA binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:139388895-139438556 (-) // 97.71 // q34.3"]
["11760158_at",116.608574,113.18312,118.14452,112.42217,102.918434,113.66996,0.0399189,-0.0030956268,0.058797836,-0.012828827,-0.14025354,0.0030961037,0.55339074,0.16953807,1.0583884,0.08186909,1.0583884,"up","HMGB1",3146.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0000902 // cell morphogenesis // inferred from electronic annotation /// 0001773 // myeloid dendritic cell activation // inferred from sequence or structural similarity /// 0002053 // positive regulation of mesenchymal cell proliferation // inferred from electronic annotation /// 0002407 // dendritic cell chemotaxis // inferred from sequence or structural similarity /// 0002437 // inflammatory response to antigenic stimulus // inferred from expression pattern /// 0006265 // DNA topological change // inferred from sequence or structural similarity /// 0006288 // base-excision repair, DNA ligation // inferred from direct assay /// 0006309 // apoptotic DNA fragmentation // traceable author statement /// 0006310 // DNA recombination // inferred from sequence or structural similarity /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006915 // apoptotic process // traceable author statement /// 0006921 // cellular component disassembly involved in apoptotic process // traceable author statement /// 0006935 // chemotaxis // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007623 // circadian rhythm // inferred from electronic annotation /// 0008156 // negative regulation of DNA replication // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0009408 // response to heat // inferred from electronic annotation /// 0009749 // response to glucose stimulus // inferred from electronic annotation /// 0010942 // positive regulation of cell death // inferred from electronic annotation /// 0010976 // positive regulation of neuron projection development // inferred from electronic annotation /// 0014911 // positive regulation of smooth muscle cell migration // inferred from electronic annotation /// 0017055 // negative regulation of RNA polymerase II transcriptional preinitiation complex assembly // inferred from direct assay /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from sequence or structural similarity /// 0031532 // actin cytoskeleton reorganization // inferred from electronic annotation /// 0032392 // DNA geometric change // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0032868 // response to insulin stimulus // inferred from electronic annotation /// 0033034 // positive regulation of myeloid cell apoptotic process // inferred from electronic annotation /// 0033151 // V(D)J recombination // inferred from direct assay /// 0034341 // response to interferon-gamma // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043280 // positive regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0043388 // positive regulation of DNA binding // inferred from direct assay /// 0045087 // innate immune response // traceable author statement /// 0045663 // positive regulation of myoblast differentiation // inferred from electronic annotation /// 0045931 // positive regulation of mitotic cell cycle // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0050727 // regulation of inflammatory response // inferred from electronic annotation /// 0050831 // male-specific defense response to bacterium // inferred from electronic annotation /// 0050918 // positive chemotaxis // inferred from sequence or structural similarity /// 0050930 // induction of positive chemotaxis // inferred from electronic annotation /// 0051103 // DNA ligation involved in DNA repair // inferred from sequence or structural similarity /// 0051450 // myoblast proliferation // inferred from electronic annotation /// 0071347 // cellular response to interleukin-1 // inferred from electronic annotation","0000793 // condensed chromosome // inferred from direct assay /// 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0017053 // transcriptional repressor complex // inferred from direct assay","0000400 // four-way junction DNA binding // inferred from electronic annotation /// 0000401 // open form four-way junction DNA binding // inferred from electronic annotation /// 0000402 // crossed form four-way junction DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003681 // bent DNA binding // inferred from electronic annotation /// 0003684 // damaged DNA binding // inferred from sequence or structural similarity /// 0003690 // double-stranded DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from sequence or structural similarity /// 0003697 // single-stranded DNA binding // inferred from electronic annotation /// 0003697 // single-stranded DNA binding // inferred from sequence or structural similarity /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0005125 // cytokine activity // inferred from electronic annotation /// 0005125 // cytokine activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0008097 // 5S rRNA binding // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008201 // heparin binding // inferred from electronic annotation /// 0008301 // DNA binding, bending // inferred from electronic annotation /// 0008301 // DNA binding, bending // inferred from mutant phenotype /// 0008301 // DNA binding, bending // inferred from sequence or structural similarity /// 0042056 // chemoattractant activity // inferred from sequence or structural similarity /// 0042277 // peptide binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation /// 0050786 // RAGE receptor binding // inferred from electronic annotation /// 0050786 // RAGE receptor binding // inferred from sequence or structural similarity /// 0051861 // glycolipid binding // inferred from electronic annotation /// 0070491 // repressing transcription factor binding // inferred from physical interaction","chr13:31035032-31040073 (-) // 95.42 // q12.3"]
["11749405_a_at",54.48845,60.799244,56.271183,56.633904,52.19481,52.43744,-0.023222923,0.13488007,0.023222446,0.032492638,-0.08526707,-0.07857609,0.60380524,0.21627267,1.0634435,0.08874344,1.0634435,"up","NCKIPSD",51517.0,"0006607 // NLS-bearing substrate import into nucleus // traceable author statement /// 0007010 // cytoskeleton organization // non-traceable author statement /// 0007165 // signal transduction // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005882 // intermediate filament // non-traceable author statement /// 0008180 // signalosome // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008092 // cytoskeletal protein binding // non-traceable author statement /// 0017124 // SH3 domain binding // inferred from electronic annotation","chr3:48712067-48717243 (-) // 100.0 // p21.31"]
["11762670_at",8.066468,6.7805367,6.7670007,6.2430873,8.055157,6.724855,0.25197935,0.0014414787,-0.0014414787,-0.11769843,0.2499547,-0.010454893,0.9213586,0.76848036,1.0305344,0.043392643,1.0305344,"up","DBIL5P2",1.00169989E8,"","","","chr2:63344985-63346677 (-) // 89.07 // p15"]
["11764046_x_at",60.358994,56.87416,54.97839,46.38115,62.552917,57.455257,0.0784626,-0.007332802,-0.056241035,-0.30156755,0.12997103,0.007332325,0.8835586,0.67953247,1.0422617,0.059717596,1.0422617,"up","IGHM",3507.0,"0006955 // immune response // non-traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005624 // membrane fraction // non-traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0003823 // antigen binding // inferred from electronic annotation","chr14:106320352-106321906 (-) // 95.6 // q32.33"]
["11743577_s_at",5.8151193,6.071009,5.8151193,6.082348,6.2926707,5.474667,-0.031063795,0.031063795,-0.031063795,0.03375578,0.08279991,-0.11810136,0.9626583,0.8851193,-1.0068434,-0.009839378,1.0068434,"down","CPE",1363.0,"0003214 // cardiac left ventricle morphogenesis // inferred from mutant phenotype /// 0006464 // cellular protein modification process // non-traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0007218 // neuropeptide signaling pathway // non-traceable author statement /// 0008152 // metabolic process // traceable author statement /// 0030070 // insulin processing // inferred from electronic annotation /// 0072657 // protein localization in membrane // inferred from direct assay","0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030141 // secretory granule // traceable author statement /// 0030658 // transport vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0004180 // carboxypeptidase activity // traceable author statement /// 0004180 // carboxypeptidase activity // inferred from electronic annotation /// 0004181 // metallocarboxypeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042043 // neurexin family protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050839 // cell adhesion molecule binding // inferred from physical interaction","chr4:166299894-166419467 (+) // 78.98 // q32.3"]
["11758835_at",98.53966,95.633484,90.51655,96.16637,95.41393,104.07732,0.039179802,-0.004008293,-0.08334255,0.004008293,-0.0073242188,0.118059635,0.7200206,0.36959454,-1.0383587,-0.05430489,1.0383587,"down","SKIV2L2",23517.0,"0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0000460 // maturation of 5.8S rRNA // inferred from mutant phenotype /// 0006364 // rRNA processing // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation","0000178 // exosome (RNase complex) // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016817 // hydrolase activity, acting on acid anhydrides // inferred from electronic annotation /// 0016818 // hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides // inferred from electronic annotation","chr5:54603574-54721869 (+) // 97.24 // q11.2"]
["11716732_at",7.4651723,7.6361256,7.6361256,6.570347,8.1941595,6.8653007,-0.016332865,0.016332626,0.016332626,-0.20053864,0.11808777,-0.13718534,0.78097636,0.46713123,1.056034,0.07865624,1.056034,"up","CRYBA4",1413.0,"0007601 // visual perception // inferred from mutant phenotype /// 0007601 // visual perception // non-traceable author statement /// 0043010 // camera-type eye development // inferred from mutant phenotype","0005625 // soluble fraction // inferred from direct assay","0005212 // structural constituent of eye lens // inferred from electronic annotation","chr22:27018547-27026633 (+) // 94.58 // q12.1"]
["11742671_x_at",6.3628545,6.150865,6.9840403,5.830605,6.3628545,6.7907257,0.0,-0.04888487,0.13438773,-0.12602854,0.0,0.09389162,0.87705606,0.665032,1.0275533,0.03921326,1.0275533,"up","GH1",2688.0,"0002092 // positive regulation of receptor internalization // inferred from direct assay /// 0007259 // JAK-STAT cascade // inferred from direct assay /// 0010535 // positive regulation of activation of JAK2 kinase activity // inferred from direct assay /// 0014068 // positive regulation of phosphatidylinositol 3-kinase cascade // inferred from direct assay /// 0015758 // glucose transport // inferred from direct assay /// 0032355 // response to estradiol stimulus // inferred from direct assay /// 0040018 // positive regulation of multicellular organism growth // inferred from direct assay /// 0040018 // positive regulation of multicellular organism growth // inferred from mutant phenotype /// 0042517 // positive regulation of tyrosine phosphorylation of Stat3 protein // inferred from direct assay /// 0042523 // positive regulation of tyrosine phosphorylation of Stat5 protein // inferred from direct assay /// 0043406 // positive regulation of MAP kinase activity // traceable author statement /// 0043568 // positive regulation of insulin-like growth factor receptor signaling pathway // inferred from direct assay /// 0046427 // positive regulation of JAK-STAT cascade // inferred from direct assay /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0060396 // growth hormone receptor signaling pathway // inferred from direct assay /// 0060397 // JAK-STAT cascade involved in growth hormone signaling pathway // traceable author statement /// 0070977 // bone maturation // inferred from direct assay","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay","0005131 // growth hormone receptor binding // inferred from direct assay /// 0005131 // growth hormone receptor binding // inferred from physical interaction /// 0005148 // prolactin receptor binding // inferred from physical interaction /// 0005179 // hormone activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:61994562-61996198 (-) // 100.0 // q23.3 /// chr17:61957574-61959223 (-) // 96.81 // q23.3"]
["11719538_at",6.071008,5.963832,5.9649506,5.274462,5.9365387,5.9274697,0.02900529,0.003308773,0.0035793781,-0.1739068,-0.003308773,-0.0055143833,0.64788544,0.27122128,1.0518103,0.07287448,1.0518103,"up","BBOX1",8424.0,"0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045329 // carnitine biosynthetic process // inferred from direct assay /// 0045329 // carnitine biosynthetic process // inferred from electronic annotation /// 0045329 // carnitine biosynthetic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0005506 // iron ion binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from direct assay /// 0008336 // gamma-butyrobetaine dioxygenase activity // inferred from direct assay /// 0008336 // gamma-butyrobetaine dioxygenase activity // inferred from sequence or structural similarity /// 0008336 // gamma-butyrobetaine dioxygenase activity // traceable author statement /// 0008336 // gamma-butyrobetaine dioxygenase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016702 // oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen // inferred from electronic annotation /// 0016706 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:27062251-27149354 (+) // 94.58 // p14.2"]
["11729108_a_at",19.36655,18.85253,17.422,21.767275,19.097456,20.685648,0.010093212,-0.02871561,-0.14256334,0.1786871,-0.010093212,0.10515642,0.4801549,0.112620525,-1.1057143,-0.14497869,1.1057143,"down","MBP",4155.0,"0006955 // immune response // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007417 // central nervous system development // traceable author statement /// 0008366 // axon ensheathment // traceable author statement /// 0009636 // response to toxin // inferred from electronic annotation /// 0042552 // myelination // inferred from electronic annotation /// 0050771 // negative regulation of axonogenesis // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0033269 // internode region of axon // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043209 // myelin sheath // inferred from electronic annotation /// 0043218 // compact myelin // inferred from electronic annotation","0002020 // protease binding // inferred from electronic annotation /// 0019911 // structural constituent of myelin sheath // inferred from electronic annotation","chr18:74690789-74844774 (-) // 98.75 // q23"]
["11747795_a_at",144.29669,151.11798,160.0676,155.68427,146.54243,152.33568,-0.07242632,-0.00578928,0.0772171,0.037158966,-0.050145626,0.00578928,0.9906392,0.9691732,1.0014333,0.002066267,1.0014333,"up","R3HCC1L",27291.0,"","","0000166 // nucleotide binding // inferred from electronic annotation","chr10:99894417-100004321 (+) // 92.3 // q24.2"]
["11762019_at",19.206245,19.962784,22.17847,18.913118,21.718084,19.625704,-0.043453217,0.012284279,0.16413116,-0.0656414,0.13386822,-0.012284279,0.92624146,0.780278,1.0179546,0.025673203,1.0179546,"up","CENPI",2491.0,"0000087 // M phase of mitotic cell cycle // traceable author statement /// 0000236 // mitotic prometaphase // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006334 // nucleosome assembly // traceable author statement /// 0007548 // sex differentiation // traceable author statement /// 0034080 // CenH3-containing nucleosome assembly at centromere // traceable author statement /// 0042699 // follicle-stimulating hormone signaling pathway // inferred from electronic annotation","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0005515 // protein binding // inferred from physical interaction","chrX:100353190-100396278 (+) // 97.58 // q22.1"]
["11729403_a_at",124.600815,127.63339,133.03941,114.97054,122.74799,119.53592,0.010807037,0.045499325,0.10534716,-0.105241776,-0.010807037,-0.049062252,0.3578738,0.04886814,1.0784218,0.1089216,1.0784218,"up","SLC30A3",7781.0,"0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // inferred from electronic annotation /// 0006829 // zinc ion transport // inferred from electronic annotation /// 0051050 // positive regulation of transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0061088 // regulation of sequestering of zinc ion // inferred from direct assay","0005624 // membrane fraction // traceable author statement /// 0005768 // endosome // traceable author statement /// 0005770 // late endosome // inferred from direct assay /// 0005887 // integral to plasma membrane // traceable author statement /// 0008021 // synaptic vesicle // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030672 // synaptic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0044444 // cytoplasmic part // inferred from direct assay /// 0045202 // synapse // inferred from electronic annotation","0008324 // cation transmembrane transporter activity // inferred from electronic annotation /// 0015633 // zinc transporting ATPase activity // traceable author statement","chr2:27477440-27486127 (-) // 95.66 // p23.3"]
["11733354_a_at",11.184704,10.849462,11.53776,12.342014,14.494607,12.774731,-0.09344339,-0.13734698,-0.04860735,0.048607588,0.2805457,0.09832239,0.3153212,0.034810133,-1.1774162,-0.23562439,1.1774162,"down","RFESD",317671.0,"0055114 // oxidation-reduction process // inferred from electronic annotation","","0016491 // oxidoreductase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation /// 0051537 // 2 iron, 2 sulfur cluster binding // inferred from electronic annotation","chr5:94982582-94992848 (+) // 76.03 // q15"]
["11722137_a_at",15.18792,15.18792,15.175576,15.589018,14.4619255,15.091372,5.862713E-4,5.862713E-4,-5.865097E-4,0.038192272,-0.07007837,-0.008613825,0.8856564,0.6847926,1.009538,0.013695294,1.009538,"up","GUCY1A3",2982.0,"0006182 // cGMP biosynthetic process // traceable author statement /// 0006182 // cGMP biosynthetic process // inferred from electronic annotation /// 0007263 // nitric oxide mediated signal transduction // traceable author statement /// 0007263 // nitric oxide mediated signal transduction // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008015 // blood circulation // traceable author statement /// 0008217 // regulation of blood pressure // inferred from electronic annotation /// 0009190 // cyclic nucleotide biosynthetic process // inferred from electronic annotation /// 0009635 // response to herbicide // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0030828 // positive regulation of cGMP biosynthetic process // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0052565 // response to defense-related host nitric oxide production // inferred from electronic annotation /// 0060087 // relaxation of vascular smooth muscle // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0008074 // guanylate cyclase complex, soluble // traceable author statement /// 0008074 // guanylate cyclase complex, soluble // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004383 // guanylate cyclase activity // inferred from electronic annotation /// 0004383 // guanylate cyclase activity // traceable author statement /// 0004872 // receptor activity // traceable author statement /// 0005525 // GTP binding // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0016849 // phosphorus-oxygen lyase activity // inferred from electronic annotation /// 0020037 // heme binding // inferred from electronic annotation /// 0043167 // ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr4:156587876-156658211 (+) // 95.18 // q32.1"]
["11724947_a_at",11.054741,10.627402,9.998106,11.414864,10.368461,11.904219,0.02843833,-0.028438091,-0.11650038,0.07468653,-0.0640254,0.13524604,0.6665902,0.29411444,-1.0625046,-0.08746915,1.0625046,"down","MAGI2",9863.0,"0002092 // positive regulation of receptor internalization // inferred from direct assay /// 0003402 // planar cell polarity pathway involved in axis elongation // non-traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from sequence or structural similarity /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // inferred from sequence or structural similarity /// 0032516 // positive regulation of phosphoprotein phosphatase activity // inferred from direct assay /// 0032926 // negative regulation of activin receptor signaling pathway // inferred from sequence or structural similarity /// 0032926 // negative regulation of activin receptor signaling pathway // inferred from electronic annotation /// 0043113 // receptor clustering // inferred from sequence or structural similarity /// 0043113 // receptor clustering // inferred from electronic annotation /// 0051291 // protein heterooligomerization // inferred from sequence or structural similarity /// 0051291 // protein heterooligomerization // inferred from electronic annotation /// 0051898 // negative regulation of protein kinase B signaling cascade // inferred from direct assay /// 0060395 // SMAD protein signal transduction // inferred from sequence or structural similarity /// 0060395 // SMAD protein signal transduction // inferred from electronic annotation /// 0071850 // mitotic cell cycle arrest // inferred from sequence or structural similarity /// 0072015 // glomerular visceral epithelial cell development // inferred from sequence or structural similarity","0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005923 // tight junction // inferred from direct assay /// 0014069 // postsynaptic density // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0036057 // slit diaphragm // inferred from sequence or structural similarity /// 0043234 // protein complex // inferred from electronic annotation /// 0045202 // synapse // inferred from sequence or structural similarity /// 0045202 // synapse // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity","0004871 // signal transducer activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016301 // kinase activity // inferred from electronic annotation /// 0019902 // phosphatase binding // inferred from physical interaction /// 0030159 // receptor signaling complex scaffold activity // inferred from direct assay /// 0030165 // PDZ domain binding // inferred from electronic annotation /// 0031697 // beta-1 adrenergic receptor binding // inferred from physical interaction /// 0032403 // protein complex binding // inferred from electronic annotation /// 0046332 // SMAD binding // inferred from sequence or structural similarity /// 0046332 // SMAD binding // inferred from electronic annotation /// 0070699 // type II activin receptor binding // inferred from sequence or structural similarity /// 0070699 // type II activin receptor binding // inferred from electronic annotation","chr7:77646392-79083121 (-) // 93.95 // q21.11"]
["11731087_a_at",239.82353,250.44855,238.62227,264.37396,247.80493,258.13397,-0.054886818,0.007654667,-0.062131405,0.08572054,-0.007654667,0.05126047,0.43558517,0.08620629,-1.0566981,-0.07956323,1.0566981,"down","TM9SF1",10548.0,"0006914 // autophagy // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0000421 // autophagic vacuole membrane // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","","chr14:24658690-24664882 (-) // 95.43 // q12"]
["11753708_a_at",32.14492,36.467274,32.51336,33.248035,35.556973,34.775295,-0.08107519,0.10093641,-0.06463337,-0.032396793,0.06446648,0.032396793,0.8496117,0.60378695,-1.0255607,-0.036412936,1.0255607,"down","CIDEC",63924.0,"0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005925 // focal adhesion // inferred from direct assay","","chr3:9908746-9920172 (-) // 99.77 // p25.3"]
["11759379_at",6.205923,6.2482634,6.5653706,5.9810314,5.908645,6.6497393,-0.004904747,0.004904747,0.07632589,-0.058156252,-0.07572317,0.094747305,0.82671934,0.5554033,1.0270355,0.038486015,1.0270355,"up","OR5L1",219437.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr11:55578842-55579952 (+) // 100.0 // q11"]
["11725427_a_at",23.31813,20.005077,18.67895,22.39015,22.727547,22.148714,0.066408634,-0.15467739,-0.25363016,0.007820606,0.029398441,-0.007820606,0.6417683,0.26350242,-1.0895752,-0.12376573,1.0895752,"down","ABLIM3",22885.0,"0007010 // cytoskeleton organization // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0008270 // zinc ion binding // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr5:148521045-148639999 (+) // 98.42 // q32"]
["11756240_a_at",111.07844,130.19356,121.33108,122.81041,119.34237,109.34661,-0.11544895,0.113630295,0.011921406,0.029405117,-0.011921883,-0.13811922,0.8599457,0.6282939,1.0306679,0.043579545,1.0306679,"up","SHISA4",149345.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr1:201858065-201861430 (+) // 96.23 // q32.1"]
["11738223_a_at",11.225188,11.082335,11.332535,10.284198,11.117195,10.397916,0.016212225,-0.0022656918,0.029943228,-0.11009812,0.0022654533,-0.094233036,0.43653503,0.08699483,1.0584735,0.08198511,1.0584735,"up","IL17F",112744.0,"0006029 // proteoglycan metabolic process // inferred from direct assay /// 0006954 // inflammatory response // inferred from electronic annotation /// 0016525 // negative regulation of angiogenesis // inferred from direct assay /// 0017015 // regulation of transforming growth factor beta receptor signaling pathway // inferred from direct assay /// 0042089 // cytokine biosynthetic process // inferred from direct assay /// 0042109 // lymphotoxin A biosynthetic process // inferred from direct assay /// 0045076 // regulation of interleukin-2 biosynthetic process // inferred from direct assay /// 0045408 // regulation of interleukin-6 biosynthetic process // inferred from direct assay /// 0045414 // regulation of interleukin-8 biosynthetic process // inferred from direct assay /// 0045423 // regulation of granulocyte macrophage colony-stimulating factor biosynthetic process // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0051216 // cartilage development // inferred from direct assay","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation","0005125 // cytokine activity // inferred from direct assay /// 0005125 // cytokine activity // inferred from electronic annotation /// 0019955 // cytokine binding // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from direct assay","chr6:52101483-52109298 (-) // 93.44 // p12.2"]
["11749937_x_at",30.734646,32.84283,40.087086,29.734941,28.83741,33.349457,-0.04785633,0.04785633,0.33541536,-0.095562935,-0.13978052,0.069941044,0.6493468,0.27363232,1.1226741,0.1669392,1.1226741,"up","ZFP36L1",677.0,"0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // inferred from electronic annotation /// 0001570 // vasculogenesis // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006402 // mRNA catabolic process // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0033077 // T cell differentiation in thymus // inferred from electronic annotation /// 0043488 // regulation of mRNA stability // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003729 // mRNA binding // inferred from direct assay /// 0003729 // mRNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0017091 // AU-rich element binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr14:69256108-69259784 (-) // 97.82 // q24.1"]
["11762502_at",6.86624,6.791821,7.566263,6.9776735,6.131739,6.3694363,0.007860899,-0.007860899,0.14792156,0.031086683,-0.15536308,-0.10049367,0.55339074,0.16958956,1.0899262,0.124230504,1.0899262,"up","DAOA-AS1",282706.0,"","","","chr13:106111407-106144526 (-) // 74.29 // q33.2"]
["11747917_a_at",16.492561,20.461632,19.774094,18.730244,17.92461,15.52102,-0.15184021,0.15926552,0.10995579,0.031713963,-0.031713963,-0.23943257,0.74007773,0.40063968,1.0859351,0.1189379,1.0859351,"up","ITGA11",22801.0,"0007155 // cell adhesion // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007160 // cell-matrix adhesion // traceable author statement /// 0007229 // integrin-mediated signaling pathway // inferred from electronic annotation /// 0007517 // muscle organ development // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0008305 // integrin complex // inferred from electronic annotation /// 0008305 // integrin complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005518 // collagen binding // traceable author statement","chr15:68594809-68724749 (-) // 99.13 // q23"]
["11738889_at",19.616268,24.703918,24.601349,25.571959,20.985018,23.503363,-0.29375172,0.03893757,0.032935143,0.088760376,-0.1964426,-0.032935143,0.95130205,0.8534373,-1.0189528,-0.02708729,1.0189528,"down","IQCD",115811.0,"","","","chr12:113633247-113658880 (-) // 91.49 // q24.13"]
["11746963_a_at",31.752068,31.002083,34.941963,29.580954,31.171164,27.344215,0.030561924,-0.003923416,0.16867208,-0.07161999,0.003923416,-0.18505287,0.49386328,0.12132055,1.1090722,0.1493533,1.1090722,"up","DNAJB2",3300.0,"0006457 // protein folding // inferred from electronic annotation /// 0006457 // protein folding // traceable author statement /// 0006986 // response to unfolded protein // traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from genetic interaction /// 0030308 // negative regulation of cell growth // inferred from genetic interaction /// 0030433 // ER-associated protein catabolic process // inferred from direct assay /// 0031398 // positive regulation of protein ubiquitination // inferred from direct assay /// 0032436 // positive regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0090084 // negative regulation of inclusion body assembly // inferred from direct assay /// 0090086 // negative regulation of protein deubiquitination // inferred from direct assay","0000502 // proteasome complex // inferred from direct assay /// 0016234 // inclusion body // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0030544 // Hsp70 protein binding // inferred from physical interaction /// 0031072 // heat shock protein binding // inferred from electronic annotation /// 0031593 // polyubiquitin binding // inferred from direct assay /// 0051082 // unfolded protein binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // traceable author statement /// 0070628 // proteasome binding // inferred from direct assay","chr2:220144088-220151596 (+) // 91.81 // q35"]
["11750684_a_at",234.46233,231.55878,241.08041,223.85605,211.2266,228.76723,0.026726723,0.008749008,0.06688452,-0.040058136,-0.12383795,-0.008749008,0.4173006,0.07546423,1.0656018,0.09166846,1.0656018,"up","DDX31",64794.0,"","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr9:135470146-135538887 (-) // 99.88 // q34.13"]
["11719312_a_at",54.594177,51.045444,57.73402,43.404266,50.564995,42.551174,0.10378647,0.0068216324,0.18446112,-0.22712374,-0.0068216324,-0.25576162,0.3591883,0.049557004,1.1988009,0.2615921,1.1988009,"up","MAP2K5",5607.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0000165 // MAPK cascade // inferred from electronic annotation /// 0000187 // activation of MAPK activity // inferred from sequence or structural similarity /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007507 // heart development // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030307 // positive regulation of cell growth // inferred from electronic annotation /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from sequence or structural similarity /// 0034115 // negative regulation of heterotypic cell-cell adhesion // inferred from sequence or structural similarity /// 0043066 // negative regulation of apoptotic process // inferred from sequence or structural similarity /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from sequence or structural similarity /// 0045415 // negative regulation of interleukin-8 biosynthetic process // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0050679 // positive regulation of epithelial cell proliferation // inferred from electronic annotation /// 0051247 // positive regulation of protein metabolic process // inferred from sequence or structural similarity /// 0060761 // negative regulation of response to cytokine stimulus // inferred from sequence or structural similarity /// 0070375 // ERK5 cascade // inferred from electronic annotation /// 0071363 // cellular response to growth factor stimulus // inferred from sequence or structural similarity /// 0071499 // cellular response to laminar fluid shear stress // traceable author statement /// 0090051 // negative regulation of cell migration involved in sprouting angiogenesis // inferred from sequence or structural similarity /// 2000342 // negative regulation of chemokine (C-X-C motif) ligand 2 production // inferred from sequence or structural similarity","0005634 // nucleus // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004707 // MAP kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr15:67834943-68099452 (+) // 91.8 // q23"]
["11763442_a_at",188.75854,196.88281,182.44463,185.07867,185.07867,185.81026,0.025557518,0.08635235,-0.023525715,-0.0028457642,-0.0028457642,0.0028457642,0.7348442,0.39356008,1.0213023,0.03041002,1.0213023,"up","NR2C1",7181.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0043401 // steroid hormone mediated signaling pathway // traceable author statement /// 0043401 // steroid hormone mediated signaling pathway // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0048386 // positive regulation of retinoic acid receptor signaling pathway // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0016605 // PML body // inferred from electronic annotation","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003707 // steroid hormone receptor activity // inferred from electronic annotation /// 0003707 // steroid hormone receptor activity // traceable author statement /// 0004872 // receptor activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0042826 // histone deacetylase binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:95433799-95435993 (-) // 54.46 // q22"]
["11730522_a_at",10.034675,10.673732,10.289565,10.375132,10.460306,9.823135,-0.04216218,0.046908855,-0.005973816,0.005973816,0.017769337,-0.072900295,0.89082384,0.6991372,1.0111357,0.015976625,1.0111357,"up","SLITRK2",84631.0,"0007409 // axonogenesis // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chrX:144899346-144907358 (+) // 95.76 // q27.3"]
["11734322_at",5.922375,5.3759766,5.316901,6.1494775,5.784693,5.762258,0.036738634,-0.10291052,-0.11885166,0.091026545,0.0028030872,-0.0028030872,0.57360756,0.18790452,-1.0658591,-0.092016704,1.0658591,"down","BMP3",651.0,"0001501 // skeletal system development // traceable author statement /// 0001503 // ossification // inferred from electronic annotation /// 0007267 // cell-cell signaling // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0040007 // growth // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0051216 // cartilage development // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0031988 // membrane-bounded vesicle // inferred from electronic annotation","0005102 // receptor binding // traceable author statement /// 0005125 // cytokine activity // inferred from electronic annotation /// 0008083 // growth factor activity // inferred from electronic annotation /// 0070700 // BMP receptor binding // inferred from physical interaction","chr4:81952118-81978685 (+) // 93.95 // q21.21"]
["11728561_a_at",10.983884,10.523871,11.105429,13.172656,11.659998,11.517982,-0.042188168,-0.10391116,-0.026311398,0.21996975,0.043991327,0.026311398,0.42585847,0.08025577,-1.1128258,-0.1542277,1.1128258,"down","TSNAXIP1",55815.0,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","","chr16:67841009-67861971 (+) // 97.37 // q22.1"]
["11764183_at",11.565351,11.856607,10.371269,12.247603,13.328782,11.884903,-0.03760171,-0.0017192364,-0.19481826,0.045088768,0.16713428,0.0017192364,0.49875283,0.12533244,-1.1090777,-0.14936043,1.1090777,"down",0.045088768,0.16713428,0.0017192364,-0.03760171,-0.0017192364,-0.19481826]
["11757477_s_at",1743.839,1712.8451,1791.8744,1735.5406,1740.3612,1717.4856,0.004880905,-0.020991325,0.044083595,-0.0020008087,0.0020008087,-0.017087936,0.79286855,0.4901084,1.0104657,0.01502041,1.0104657,"up","LASP1",3927.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from sequence or structural similarity /// 0006811 // ion transport // inferred from electronic annotation /// 0034220 // ion transmembrane transport // inferred from sequence or structural similarity /// 0034220 // ion transmembrane transport // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from electronic annotation /// 0005938 // cell cortex // inferred from electronic annotation /// 0030864 // cortical actin cytoskeleton // inferred from sequence or structural similarity /// 0030864 // cortical actin cytoskeleton // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0005070 // SH3/SH2 adaptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0015075 // ion transmembrane transporter activity // inferred from sequence or structural similarity /// 0015075 // ion transmembrane transporter activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051015 // actin filament binding // inferred from electronic annotation","chr17:37077627-37078023 (+) // 89.51 // q12"]
["11762960_at",13.491737,15.18792,14.74688,11.272095,13.182445,11.904214,0.016729116,0.18757701,0.14506269,-0.24259138,-0.016729116,-0.16387463,0.32454416,0.037148956,1.1954231,0.25752136,1.1954231,"up","C3orf67",200844.0,"","","","chr3:58873071-59035485 (-) // 99.89 // p14.2"]
["11762969_x_at",26.387726,29.490265,32.168293,27.103127,32.018936,27.047493,-0.09948206,0.06088972,0.18629026,-0.06088972,0.1795764,-0.06385422,0.933894,0.8019756,1.0216883,0.03095518,1.0216883,"up","MEI1",150365.0,"0007126 // meiosis // inferred from electronic annotation /// 0007141 // male meiosis I // inferred from electronic annotation /// 0007276 // gamete generation // inferred from electronic annotation /// 0007286 // spermatid development // inferred from electronic annotation","","","chr22:42177418-42190052 (+) // 84.49 // q13.2"]
["11743298_a_at",515.3228,515.52795,497.13266,503.3034,512.9085,493.83966,0.020411491,0.020985603,-0.03143406,-0.013636589,0.013636589,-0.0410223,0.802662,0.5091242,1.0118498,0.016995095,1.0118498,"up","CNOT6",57472.0,"0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0000289 // nuclear-transcribed mRNA poly(A) tail shortening // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0003723 // RNA binding // inferred from electronic annotation /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004527 // exonuclease activity // inferred from electronic annotation /// 0004535 // poly(A)-specific ribonuclease activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr5:179921403-180005404 (+) // 97.37 // q35.3"]
["11716857_at",23.377869,23.229322,21.709782,29.031988,21.652067,21.981146,0.049036503,0.03984022,-0.05776167,0.3615365,-0.061602116,-0.03984022,0.8556831,0.61881095,-1.0543299,-0.07632632,1.0543299,"down","SUPT7L",9913.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0043966 // histone H3 acetylation // inferred from direct assay /// 0051457 // maintenance of protein location in nucleus // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0030914 // STAGA complex // inferred from direct assay","0003713 // transcription coactivator activity // inferred from direct assay /// 0004402 // histone acetyltransferase activity // inferred from direct assay","chr2:27873002-27886707 (-) // 84.48 // p23.3"]
["11756496_a_at",16.461775,17.30904,16.858772,14.996882,15.332235,15.663509,0.035856247,0.10826206,0.07023573,-0.0986011,-0.06669545,-0.035856247,0.17863429,0.0074567194,1.1007618,0.13850227,1.1007618,"up","SERPINA6",866.0,"0006810 // transport // inferred from electronic annotation /// 0008211 // glucocorticoid metabolic process // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // not recorded /// 0030162 // regulation of proteolysis // not recorded","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // not recorded /// 0005615 // extracellular space // inferred from electronic annotation","0004867 // serine-type endopeptidase inhibitor activity // not recorded /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0004867 // serine-type endopeptidase inhibitor activity // traceable author statement /// 0005496 // steroid binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation","chr14:94770585-94781004 (-) // 90.55 // q32.13"]
["11735093_a_at",70.44474,79.74664,78.77406,77.12234,71.5674,67.87872,-0.07673359,0.102198124,0.08449507,0.053923607,-0.053923607,-0.13026667,0.71570444,0.36301643,1.0570734,0.080075495,1.0570734,"up","TOM1L2",146691.0,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","","chr17:17746822-17875784 (-) // 99.02 // p11.2"]
["11761199_x_at",25.068384,22.363745,22.28634,27.137144,26.272017,25.068384,0.0,-0.16470718,-0.1697092,0.11439991,0.06765795,0.0,0.37753108,0.056811184,-1.1267427,-0.17215812,1.1267427,"down","C5orf25",375484.0,"","","","chr5:175665402-175723323 (+) // 86.23 // q35.2"]
["11729888_a_at",149.15813,143.47932,138.24701,146.49371,159.60265,158.9394,0.013001919,-0.04299736,-0.09659243,-0.013001919,0.11064434,0.10463667,0.45676315,0.098961405,-1.0789458,-0.10962234,1.0789458,"down","FAM5C",339479.0,"0007399 // nervous system development // inferred from electronic annotation /// 0045786 // negative regulation of cell cycle // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","","chr1:190066796-190447012 (-) // 99.49 // q31.1"]
["11731969_at",29.265064,25.147213,28.436949,23.385117,28.466984,24.459965,0.13009691,-0.08868408,0.08868408,-0.19349194,0.0902071,-0.1286602,0.6931922,0.33009365,1.0872477,0.1206807,1.0872477,"up","SPCS2",9789.0,"0006112 // energy reserve metabolic process // traceable author statement /// 0006412 // translation // traceable author statement /// 0006465 // signal peptide processing // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0050796 // regulation of insulin secretion // traceable author statement","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005787 // signal peptidase complex // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008233 // peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr11:74660291-74690076 (+) // 73.82 // q13.4"]
["11754285_a_at",39.992702,45.04566,43.64889,39.956448,40.845093,39.911133,-0.015213013,0.15643835,0.11099529,-0.016521454,0.015213013,-0.018158436,0.543428,0.1595118,1.0647852,0.09056248,1.0647852,"up","TTR",7276.0,"0006810 // transport // inferred from electronic annotation /// 0006810 // transport // non-traceable author statement","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0005179 // hormone activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0042562 // hormone binding // inferred from electronic annotation","chr18:29171911-29178783 (+) // 94.43 // q12.1"]
["11723381_a_at",46.60241,50.342724,56.30925,56.29544,59.728977,55.342598,-0.26029968,-0.14892101,0.012668133,0.012313843,0.097726345,-0.012313366,0.5013489,0.12779166,-1.1209794,-0.1647598,1.1209794,"down","DPY19L4",286148.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr8:95732106-95806064 (+) // 89.94 // q22.1"]
["11747908_s_at",39.039635,44.14351,47.830826,41.825462,38.05887,39.905052,-0.065536976,0.11172485,0.2274642,0.03390503,-0.1022439,-0.03390503,0.63283175,0.25267532,1.0907335,0.12529868,1.0907335,"up","CUL7",9820.0,"0001570 // vasculogenesis // inferred from sequence or structural similarity /// 0001570 // vasculogenesis // inferred from electronic annotation /// 0006508 // proteolysis // non-traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005680 // anaphase-promoting complex // non-traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0031461 // cullin-RING ubiquitin ligase complex // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from electronic annotation","chr6:43005357-43021637 (-) // 99.36 // p21.1"]
["11736117_a_at",1379.4398,1357.4281,1404.5372,1384.3727,1377.947,1366.2268,7.8105927E-4,-0.022425652,0.02679348,0.0059309006,-7.8105927E-4,-0.013104439,0.9289719,0.7890468,1.0030321,0.0043677604,1.0030321,"up","ZFAND5",7763.0,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0001944 // vasculature development // inferred from electronic annotation /// 0003016 // respiratory system process // inferred from electronic annotation /// 0010761 // fibroblast migration // inferred from electronic annotation /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from electronic annotation /// 0048705 // skeletal system morphogenesis // inferred from electronic annotation /// 0048745 // smooth muscle tissue development // inferred from electronic annotation /// 0060324 // face development // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:74966340-74980386 (-) // 86.52 // q21.13"]
["11751544_a_at",6.6604695,6.4240184,7.9920583,6.4697046,7.5725775,7.1110864,-0.04722309,-0.09937096,0.21572018,-0.08914709,0.13793755,0.04722309,0.98301345,0.9429788,-1.0062317,-0.008962496,1.0062317,"down","MYO1F",4542.0,"0002446 // neutrophil mediated immunity // inferred from electronic annotation /// 0007162 // negative regulation of cell adhesion // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0032956 // regulation of actin cytoskeleton organization // inferred from electronic annotation /// 0043312 // neutrophil degranulation // inferred from electronic annotation /// 0045088 // regulation of innate immune response // inferred from electronic annotation /// 0050830 // defense response to Gram-positive bacterium // inferred from electronic annotation","0016459 // myosin complex // inferred from electronic annotation /// 0016461 // unconventional myosin complex // non-traceable author statement /// 0030864 // cortical actin cytoskeleton // inferred from electronic annotation /// 0031941 // filamentous actin // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003774 // motor activity // inferred from electronic annotation /// 0003779 // actin binding // non-traceable author statement /// 0003779 // actin binding // inferred from electronic annotation /// 0005516 // calmodulin binding // non-traceable author statement /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005524 // ATP binding // non-traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation","chr19:8616549-8642322 (-) // 99.56 // p13.2"]
["11745694_x_at",12.9323435,11.324625,11.254574,10.667253,11.410809,13.650782,0.1860516,-0.0054688454,-0.014420509,-0.09174371,0.0054688454,0.2640512,0.9931564,0.97671866,-1.002687,-0.0038712902,1.002687,"down","DFFB",1677.0,"0006309 // apoptotic DNA fragmentation // inferred from direct assay /// 0006309 // apoptotic DNA fragmentation // inferred from electronic annotation /// 0006309 // apoptotic DNA fragmentation // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0006921 // cellular component disassembly involved in apoptotic process // traceable author statement /// 0030263 // apoptotic chromosome condensation // inferred from direct assay /// 0035556 // intracellular signal transduction // traceable author statement","0000790 // nuclear chromatin // inferred from direct assay /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0003677 // DNA binding // inferred from electronic annotation /// 0004516 // nicotinate phosphoribosyltransferase activity // inferred from electronic annotation /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004536 // deoxyribonuclease activity // inferred from electronic annotation /// 0004536 // deoxyribonuclease activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction","chr1:3774167-3800305 (+) // 99.9 // p36.32"]
["11722245_a_at",768.5304,807.10223,811.5582,845.04095,828.61224,849.4992,-0.0935936,-0.02294445,-0.015001297,0.043325424,0.015001297,0.05091667,0.33905825,0.042232264,-1.0572093,-0.080260955,1.0572093,"down","PTDSS2",81490.0,"0006659 // phosphatidylserine biosynthetic process // inferred from electronic annotation /// 0008654 // phospholipid biosynthetic process // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from sequence or structural similarity /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003882 // CDP-diacylglycerol-serine O-phosphatidyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr11:450264-491399 (+) // 95.28 // p15.5"]
["11752436_x_at",7.1317787,7.6706862,7.425605,8.125439,6.8395967,7.2786903,-0.043831825,0.061261654,0.014414787,0.1443522,-0.10418248,-0.014415026,0.99407154,0.9806729,1.0014081,0.0020300301,1.0014081,"up","MAP9",79884.0,"0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation","","chr4:156268892-156297988 (-) // 96.23 // q32.1"]
["11735399_at",25.516161,23.15102,24.527296,22.485855,24.19737,31.392504,0.06679201,-0.07354355,0.009768963,-0.11560154,-0.009768963,0.36580086,0.86055464,0.62931377,-1.0563864,-0.07913756,1.0563864,"down","VPS13A",23230.0,"0006810 // transport // inferred from electronic annotation /// 0006895 // Golgi to endosome transport // non-traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0008104 // protein localization // non-traceable author statement /// 0008104 // protein localization // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0035176 // social behavior // inferred from electronic annotation","0005622 // intracellular // non-traceable author statement","0005515 // protein binding // inferred from physical interaction","chr9:79792342-79999952 (+) // 99.02 // q21.2"]
["11726988_s_at",2224.2605,2196.5994,2289.4868,2256.7366,2131.1929,2234.367,-0.0032701492,-0.021324158,0.038428307,0.017642021,-0.06493473,0.0032701492,0.8325546,0.56772727,1.0134574,0.019285472,1.0134574,"up","EIF2AK1",27102.0,"0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006418 // tRNA aminoacylation for protein translation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006950 // response to stress // inferred from expression pattern /// 0006950 // response to stress // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0009605 // response to external stimulus // inferred from expression pattern /// 0010467 // gene expression // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0017148 // negative regulation of translation // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0031398 // positive regulation of protein ubiquitination // inferred from electronic annotation /// 0045993 // negative regulation of translational initiation by iron // non-traceable author statement /// 0046777 // protein autophosphorylation // inferred from sequence or structural similarity /// 0046777 // protein autophosphorylation // inferred from electronic annotation /// 0046986 // negative regulation of hemoglobin biosynthetic process // inferred from sequence or structural similarity /// 0046986 // negative regulation of hemoglobin biosynthetic process // inferred from electronic annotation /// 0060510 // Type II pneumocyte differentiation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004694 // eukaryotic translation initiation factor 2alpha kinase activity // inferred from direct assay /// 0004694 // eukaryotic translation initiation factor 2alpha kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0020037 // heme binding // inferred from sequence or structural similarity /// 0020037 // heme binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from sequence or structural similarity /// 0042803 // protein homodimerization activity // inferred from electronic annotation","chr7:6061879-6098860 (-) // 92.26 // p22.1"]
["11733624_at",8.241613,8.4700575,6.9394655,8.31493,8.979268,9.4882145,-0.026111126,0.013333797,-0.2742133,-0.013333797,0.09755993,0.17709875,0.54278886,0.1585016,-1.1350626,-0.18277183,1.1350626,"down","ZNF831",128611.0,"","0005622 // intracellular // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr20:57766074-57834168 (+) // 97.27 // q13.32"]
["11755030_a_at",51.81852,55.062458,47.92313,52.559196,50.46822,53.82317,-0.010237694,0.07736349,-0.122983456,0.010237694,-0.048330307,0.04452181,0.9184837,0.7619198,-1.0144954,-0.020762285,1.0144954,"down","PRRT4",401399.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr7:127990383-128000144 (-) // 95.18 // q32.1"]
["11760926_at",19.278622,18.8231,20.361416,18.798117,19.328196,18.924686,0.013366222,-0.021131516,0.09220219,-0.023047447,0.017071247,-0.013366222,0.7307146,0.38684458,1.0242679,0.03459312,1.0242679,"up","CENPT",80152.0,"0000087 // M phase of mitotic cell cycle // traceable author statement /// 0000236 // mitotic prometaphase // traceable author statement /// 0000278 // mitotic cell cycle // inferred from mutant phenotype /// 0000278 // mitotic cell cycle // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007059 // chromosome segregation // inferred from mutant phenotype /// 0007067 // mitosis // inferred from electronic annotation /// 0051276 // chromosome organization // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation /// 0051382 // kinetochore assembly // inferred from mutant phenotype","0000775 // chromosome, centromeric region // inferred from direct assay /// 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from direct assay /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr16:67863959-67867841 (-) // 100.0 // q22.1"]
["11735481_at",8.4785,8.666201,8.697944,8.299084,9.585586,7.875675,-0.01579523,0.01579523,0.021070004,-0.046652317,0.16126227,-0.12220073,0.97387433,0.9164415,1.006644,0.009553579,1.006644,"up","NYAP1",222950.0,"0014065 // phosphatidylinositol 3-kinase cascade // inferred from sequence or structural similarity /// 0048812 // neuron projection morphogenesis // inferred from sequence or structural similarity","","0005515 // protein binding // inferred from sequence or structural similarity","chr7:100081549-100092422 (+) // 98.77 // q22.1"]
["11725344_a_at",102.42512,111.208954,116.20731,104.88015,104.20732,105.09348,-0.035638332,0.08306551,0.14649343,-0.0014657974,-0.010750771,0.0014662743,0.6479681,0.27130246,1.048425,0.0682236,1.048425,"up","VPS37A",137492.0,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016032 // viral reproduction // traceable author statement /// 0016044 // cellular membrane organization // traceable author statement /// 0016197 // endosomal transport // traceable author statement /// 0046788 // egress of virus within host cell // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0010008 // endosome membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0031902 // late endosome membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","","chr8:17104405-17155532 (+) // 93.26 // p22"]
["11741933_at",7.4959965,5.89161,6.6834984,7.2991586,7.566263,6.640504,0.10195327,-0.24550486,-0.06356335,0.06356335,0.11541414,-0.07287407,0.74904555,0.41523135,-1.0750518,-0.104406156,1.0750518,"down","RFPL1",5988.0,"","","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr22:29834571-29838444 (+) // 100.0 // q12.2"]
["11743032_at",404.27924,440.5748,453.29053,441.92703,446.8344,432.61157,-0.1262455,-0.002210617,0.038838387,0.002210617,0.0181427,-0.028525352,0.8592768,0.62582207,-1.0189961,-0.027148558,1.0189961,"down","CGA",1081.0,"0006590 // thyroid hormone generation // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0008406 // gonad development // inferred from electronic annotation /// 0016486 // peptide hormone processing // traceable author statement /// 0030878 // thyroid gland development // inferred from electronic annotation /// 0032275 // luteinizing hormone secretion // inferred from electronic annotation /// 0032870 // cellular response to hormone stimulus // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046621 // negative regulation of organ growth // inferred from electronic annotation /// 0046884 // follicle-stimulating hormone secretion // inferred from electronic annotation /// 0048589 // developmental growth // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005625 // soluble fraction // traceable author statement","0005179 // hormone activity // inferred from electronic annotation /// 0005179 // hormone activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr6:87795278-87805125 (-) // 74.04 // q14.3"]
["11750660_a_at",51.17735,50.414288,53.701912,50.405293,48.939823,48.435596,0.021801472,1.2874603E-4,0.09126949,-1.2874603E-4,-0.042695045,-0.05763626,0.44665933,0.09313773,1.0506047,0.07121994,1.0506047,"up","TEP1",7011.0,"0000722 // telomere maintenance via recombination // inferred from direct assay","0000781 // chromosome, telomeric region // inferred from electronic annotation /// 0005625 // soluble fraction // inferred from sequence or structural similarity /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005697 // telomerase holoenzyme complex // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0016363 // nuclear matrix // inferred from direct assay /// 0030529 // ribonucleoprotein complex // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003720 // telomerase activity // inferred from direct assay /// 0003723 // RNA binding // inferred from sequence or structural similarity /// 0003723 // RNA binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation","chr14:20839713-20850421 (-) // 98.45 // q11.2"]
["11726368_x_at",123.773,127.63529,144.60637,130.79726,119.84148,118.42206,-0.022165298,0.022164822,0.2022686,0.057469845,-0.06873512,-0.0859251,0.664351,0.29129085,1.0716394,0.099819556,1.0716394,"up","ERICH1",157697.0,"","","","chr8:614199-681239 (-) // 97.52 // p23.3"]
["11733342_at",16.46054,20.348316,20.97678,20.348316,20.713055,22.057497,-0.3187132,-0.012815475,0.031068325,-0.012815475,0.012815475,0.103544235,0.67690426,0.30854335,-1.0978403,-0.13466822,1.0978403,"down","IDI2",91734.0,"0006694 // steroid biosynthetic process // inferred from electronic annotation /// 0006695 // cholesterol biosynthetic process // traceable author statement /// 0006695 // cholesterol biosynthetic process // inferred from electronic annotation /// 0008299 // isoprenoid biosynthetic process // inferred from direct assay /// 0008299 // isoprenoid biosynthetic process // inferred from electronic annotation /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0016126 // sterol biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0050992 // dimethylallyl diphosphate biosynthetic process // inferred from electronic annotation","0005777 // peroxisome // inferred from direct assay /// 0005777 // peroxisome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0004452 // isopentenyl-diphosphate delta-isomerase activity // inferred from direct assay /// 0004452 // isopentenyl-diphosphate delta-isomerase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr10:1064846-1070686 (-) // 94.4 // p15.3"]
["11718128_x_at",633.5861,614.8479,636.2908,573.2706,602.4849,564.374,0.05796337,0.014652252,0.06410885,-0.08636093,-0.014652252,-0.10892582,0.27265808,0.023454528,1.0833913,0.11555442,1.0833913,"up","TK1",7083.0,"0006139 // nucleobase-containing compound metabolic process // traceable author statement /// 0006206 // pyrimidine base metabolic process // traceable author statement /// 0006260 // DNA replication // inferred from electronic annotation /// 0009165 // nucleotide biosynthetic process // not recorded /// 0016310 // phosphorylation // inferred from electronic annotation /// 0043097 // pyrimidine nucleoside salvage // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051289 // protein homotetramerization // inferred from physical interaction /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0004797 // thymidine kinase activity // inferred from electronic annotation /// 0004797 // thymidine kinase activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from direct assay /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0019206 // nucleoside kinase activity // not recorded /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:76169995-76183314 (-) // 90.46 // q25.3"]
["11718988_s_at",62.48239,56.540836,60.4412,62.937927,69.05569,74.491684,-0.0052399635,-0.14939642,-0.053156853,0.0052399635,0.13907051,0.24838972,0.40963775,0.071353845,-1.1488293,-0.2001645,1.1488293,"down","RNASE4",6038.0,"0006379 // mRNA cleavage // non-traceable author statement /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation","0005576 // extracellular region // inferred from direct assay /// 0005576 // extracellular region // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004519 // endonuclease activity // inferred from electronic annotation /// 0004522 // pancreatic ribonuclease activity // non-traceable author statement /// 0004522 // pancreatic ribonuclease activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr14:21152371-21168753 (+) // 90.95 // q11.2"]
["11730247_a_at",23.492086,17.029367,21.549501,19.937424,17.952667,18.13881,0.3048954,-0.15925455,0.1803751,0.068199635,-0.083081245,-0.068199635,0.7428919,0.40556377,1.0991328,0.13636567,1.0991328,"up","PVRIG /// STAG3","10734 /// 79037","0007049 // cell cycle // inferred from electronic annotation /// 0007059 // chromosome segregation // inferred from electronic annotation /// 0007126 // meiosis // inferred from electronic annotation /// 0007130 // synaptonemal complex assembly // traceable author statement","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000795 // synaptonemal complex // traceable author statement /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030893 // meiotic cohesin complex // inferred from direct assay","","chr7:99816867-99819111 (+) // 91.98 // q22.1"]
["11733434_a_at",5.595534,6.0649323,5.7378035,5.694352,5.785822,6.04172,-0.04223442,0.073981285,-0.0060117245,-0.016978502,0.0060117245,0.06844902,0.93904096,0.8168012,-1.0073621,-0.010582398,1.0073621,"down","MCF2",4168.0,"0006915 // apoptotic process // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0016358 // dendrite development // inferred from electronic annotation /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005624 // membrane fraction // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation","chrX:138663928-138790386 (-) // 99.64 // q27.1"]
["11755530_x_at",26.309713,23.30779,23.212515,23.534744,22.869278,25.208551,0.16779327,-0.006989956,-0.012899399,0.006989956,-0.034391403,0.10611105,0.92060405,0.766181,1.0161158,0.023064803,1.0161158,"up","ZNF34",80778.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:145998502-145999106 (-) // 98.13 // q24.3"]
["11729105_a_at",7.6291213,8.495007,8.688753,9.404767,8.181424,9.094103,-0.17136502,-0.016267061,0.0162673,0.13051033,-0.07052994,0.08204937,0.6550999,0.2804989,-1.0750955,-0.104464866,1.0750955,"down","HPCAL4",51440.0,"0007417 // central nervous system development // traceable author statement","0005622 // intracellular // inferred from direct assay","0005246 // calcium channel regulator activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005509 // calcium ion binding // traceable author statement /// 0008022 // protein C-terminus binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation","chr1:40144319-40157384 (-) // 91.22 // p34.2"]
["11758339_x_at",29.5882,24.888367,29.396753,28.05586,32.333866,28.36224,0.03520775,-0.2143426,0.025842667,-0.041512012,0.16323185,-0.025842667,0.7843804,0.4726926,-1.0592598,-0.083056435,1.0592598,"down","FLJ45445 /// LOC100128326 /// LOC100132050 /// LOC100132062 /// LOC100287894 /// LOC100289306 /// LOC100506479 /// LOC100508632 /// LOC100652872 /// LOC100652945 /// LOC100653176 /// LOC100653241 /// LOC100653346 /// LOC729737","100128326 /// 100132050 /// 100132062 /// 100287894 /// 100289306 /// 100506479 /// 100508632 /// 100652872 /// 100652945 /// 100653176 /// 100653241 /// 100653346 /// 399844 /// 729737","","","","chr1:326226-326732 (+) // 99.41 // p36.33 /// chr16:90234326-90234832 (+) // 99.01 // q24.3 /// chr3:197945953-197946450 (+) // 98.02 // q29 /// chr5:180752841-180753347 (+) // 99.41 // q35.3 /// chr7:128293015-128293521 (+) // 97.04 // q32.1 /// chr1:137402-137908 (-) // 99.41 // p36.33 /// chr1:662890-663396 (-) // 99.21 // p36.33 /// chr11:129079-129585 (-) // 99.8 // p15.5 /// chr19:200548-201054 (-) // 99.8 // p13.3"]
["11752386_a_at",109.16277,105.9308,120.05469,110.72486,107.47193,117.43935,-0.010249138,-0.05360794,0.12696123,0.010249138,-0.03276968,0.09518576,0.98894,0.9638799,-1.0022116,-0.0031870992,1.0022116,"down","NAB1",4664.0,"0001958 // endochondral ossification // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0014037 // Schwann cell differentiation // inferred from electronic annotation /// 0042552 // myelination // inferred from electronic annotation /// 0045682 // regulation of epidermis development // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // non-traceable author statement /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0008134 // transcription factor binding // inferred from electronic annotation","chr2:191513995-191555645 (+) // 99.95 // q32.2"]
["11741789_a_at",1490.6188,1497.7649,1560.294,1549.7803,1631.7896,1569.4965,-0.061029434,-0.0541296,0.0048770905,-0.0048770905,0.069514275,0.013360977,0.47503048,0.109859325,-1.044462,-0.06275996,1.044462,"down","NDUFB6",4712.0,"0006120 // mitochondrial electron transport, NADH to ubiquinone // non-traceable author statement /// 0006120 // mitochondrial electron transport, NADH to ubiquinone // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0022900 // electron transport chain // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005747 // mitochondrial respiratory chain complex I // inferred from direct assay /// 0005747 // mitochondrial respiratory chain complex I // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from direct assay /// 0070469 // respiratory chain // inferred from electronic annotation","0008137 // NADH dehydrogenase (ubiquinone) activity // non-traceable author statement /// 0008137 // NADH dehydrogenase (ubiquinone) activity // traceable author statement","chr9:32553522-32573182 (-) // 100.0 // p21.1"]
["11748140_s_at",980.1237,959.9367,984.5764,927.8747,926.2262,940.5416,0.044748306,0.014723778,0.05128765,-0.034285545,-0.03685093,-0.014723778,0.1801569,0.007780563,1.0464766,0.06554005,1.0464766,"up","AMD1",262.0,"0006557 // S-adenosylmethioninamine biosynthetic process // inferred from electronic annotation /// 0006595 // polyamine metabolic process // traceable author statement /// 0006596 // polyamine biosynthetic process // inferred from electronic annotation /// 0006597 // spermine biosynthetic process // inferred from electronic annotation /// 0006597 // spermine biosynthetic process // non-traceable author statement /// 0008295 // spermidine biosynthetic process // inferred from electronic annotation /// 0008295 // spermidine biosynthetic process // non-traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005829 // cytosol // traceable author statement","0004014 // adenosylmethionine decarboxylase activity // inferred from electronic annotation /// 0004014 // adenosylmethionine decarboxylase activity // traceable author statement /// 0016829 // lyase activity // inferred from electronic annotation /// 0016831 // carboxy-lyase activity // inferred from electronic annotation","chr6:111195986-111215033 (+) // 97.21 // q21"]
["11741704_x_at",28.366571,28.439524,31.28106,31.47868,29.452744,34.845997,-0.097653866,-0.093948364,0.04344368,0.052529335,-0.04344368,0.19914722,0.61695147,0.23222579,-1.0858291,-0.1187971,1.0858291,"down","HIST1H2BC /// HIST1H2BE /// HIST1H2BF /// HIST1H2BG /// HIST1H2BI","8339 /// 8343 /// 8344 /// 8346 /// 8347","0006334 // nucleosome assembly // non-traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0042742 // defense response to bacterium // inferred from electronic annotation","0000786 // nucleosome // non-traceable author statement /// 0000786 // nucleosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation","chr6:26123583-26124154 (-) // 100.0 // p22.2"]
["11745242_a_at",129.31862,126.01126,127.359184,124.906685,129.11209,123.35333,0.029702663,-0.007674694,0.007675171,-0.020376682,0.027396679,-0.03843069,0.74904555,0.41521668,1.0142205,0.020371307,1.0142205,"up","TNFRSF21",27242.0,"0006915 // apoptotic process // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051402 // neuron apoptotic process // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr6:47200500-47277646 (-) // 97.17 // p12.3"]
["11745995_x_at",18.298319,20.01331,22.053226,19.318563,18.787205,21.094034,-0.10376263,0.025485992,0.1655159,-0.025485992,-0.06572342,0.101361275,0.9314001,0.7952209,1.0179706,0.025695842,1.0179706,"up","ADARB2",105.0,"0006396 // RNA processing // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay","0003723 // RNA binding // inferred from electronic annotation /// 0003725 // double-stranded RNA binding // inferred from electronic annotation /// 0003725 // double-stranded RNA binding // traceable author statement /// 0003727 // single-stranded RNA binding // traceable author statement /// 0004000 // adenosine deaminase activity // inferred from electronic annotation /// 0004000 // adenosine deaminase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr10:1228073-1246465 (-) // 87.06 // p15.3"]
["11723842_s_at",340.15454,354.9049,353.07736,355.8761,363.90683,360.66852,-0.06321335,-0.0019712448,-0.009419441,0.0019712448,0.034165382,0.021269798,0.47421658,0.109405875,-1.0309708,-0.044003487,1.0309708,"down","SNX11",29916.0,"0006810 // transport // inferred from electronic annotation /// 0007154 // cell communication // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation","0008289 // lipid binding // inferred from electronic annotation /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation","chr17:46184910-46201135 (+) // 99.71 // q21.32"]
["11724740_x_at",5823.148,5789.4336,5823.5176,5767.6377,5732.8994,5741.0796,0.011097908,0.0027208328,0.011189461,-0.0027208328,-0.011436462,-0.009380341,0.22353448,0.013630136,1.0112796,0.016181907,1.0112796,"up","HMGN2",3151.0,"0006325 // chromatin organization // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement","0000785 // chromatin // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0031492 // nucleosomal DNA binding // inferred from electronic annotation","chr1:26798901-26803131 (+) // 90.09 // p36.11"]
["11743434_a_at",149.95749,161.01709,147.94348,152.17108,154.37401,158.61787,-0.031508923,0.07115173,-0.051015854,-0.01036787,0.01036787,0.049492836,0.8711224,0.65248764,-1.0141623,-0.020288553,1.0141623,"down","CHST11",50515.0,"0002063 // chondrocyte development // inferred from electronic annotation /// 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0007585 // respiratory gaseous exchange // inferred from electronic annotation /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0016051 // carbohydrate biosynthetic process // inferred from electronic annotation /// 0030204 // chondroitin sulfate metabolic process // inferred from electronic annotation /// 0030206 // chondroitin sulfate biosynthetic process // inferred from direct assay /// 0030206 // chondroitin sulfate biosynthetic process // inferred from electronic annotation /// 0030326 // embryonic limb morphogenesis // inferred from electronic annotation /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0033037 // polysaccharide localization // inferred from electronic annotation /// 0035121 // tail morphogenesis // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042733 // embryonic digit morphogenesis // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0048589 // developmental growth // inferred from electronic annotation /// 0048703 // embryonic viscerocranium morphogenesis // inferred from electronic annotation /// 0048704 // embryonic skeletal system morphogenesis // inferred from electronic annotation /// 0051216 // cartilage development // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0001537 // N-acetylgalactosamine 4-O-sulfotransferase activity // inferred from direct assay /// 0008146 // sulfotransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0047756 // chondroitin 4-sulfotransferase activity // inferred from direct assay /// 0047756 // chondroitin 4-sulfotransferase activity // inferred from electronic annotation","chr12:104850777-105155792 (+) // 85.89 // q23.3"]
["11719615_s_at",1114.6165,1183.3351,1165.0786,952.7892,966.6508,917.2949,0.10274029,0.18905163,0.16662025,-0.12357807,-0.10274029,-0.1783495,0.09372248,0.001106189,1.220687,0.28769335,1.220687,"up","LARP4",113251.0,"0007010 // cytoskeleton organization // inferred from mutant phenotype /// 0022604 // regulation of cell morphogenesis // inferred from mutant phenotype","0030529 // ribonucleoprotein complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation","chr12:50794639-50873787 (+) // 97.82 // q13.12"]
["11725488_a_at",231.88834,228.0407,236.65092,279.76428,252.38405,272.29065,-0.07575989,-0.09989977,-0.04643011,0.19502115,0.04643011,0.15595675,0.21056862,0.011821172,-1.1538849,-0.20649931,1.1538849,"down","ATG14",22863.0,"0000045 // autophagic vacuole assembly // inferred from mutant phenotype /// 0006914 // autophagy // inferred from electronic annotation /// 0010508 // positive regulation of autophagy // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005776 // autophagic vacuole // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0034045 // pre-autophagosomal structure membrane // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr14:55833109-55878598 (-) // 87.47 // q22.3"]
["11741161_a_at",41.587772,46.858475,42.77668,41.26587,43.47341,42.978317,-0.04405737,0.12809324,-0.0033922195,-0.05526781,0.019916534,0.0033922195,0.8214864,0.5444291,1.0263581,0.03753422,1.0263581,"up","SWT1",54823.0,"","","","chr1:185126290-185260912 (+) // 99.07 // q25.3"]
["11736515_a_at",23.566736,25.165188,24.11822,23.706991,23.88485,24.592123,-0.02635765,0.0683198,0.0070137978,-0.017796993,-0.0070137978,0.03508663,0.8955821,0.70813406,1.0089817,0.012900015,1.0089817,"up","HTR5A",3361.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007187 // G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger // inferred from electronic annotation /// 0007210 // serotonin receptor signaling pathway // inferred from direct assay /// 0007210 // serotonin receptor signaling pathway // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0019933 // cAMP-mediated signaling // inferred from electronic annotation /// 0021766 // hippocampus development // inferred from electronic annotation /// 0032355 // response to estradiol stimulus // inferred from electronic annotation","0005791 // rough endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0043204 // perikaryon // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004993 // serotonin receptor activity // inferred from direct assay /// 0004993 // serotonin receptor activity // inferred from electronic annotation /// 0004993 // serotonin receptor activity // traceable author statement","chr7:154861775-154879100 (+) // 91.84 // q36.2"]
["11754774_s_at",298.72345,302.04602,287.0407,313.38678,297.71216,295.5406,0.0024461746,0.018404007,-0.055109024,0.07157993,-0.0024461746,-0.013008118,0.7609513,0.43468013,-1.0211028,-0.030128097,1.0211028,"down","NPAS2",4862.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007417 // central nervous system development // traceable author statement /// 0042745 // circadian sleep/wake cycle // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045475 // locomotor rhythm // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from genetic interaction /// 0048511 // rhythmic process // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from physical interaction /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0003677 // DNA binding // inferred from physical interaction /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0051879 // Hsp90 protein binding // inferred from direct assay","chr2:101610452-101612446 (+) // 98.52 // q11.2"]
["11720404_at",62.96198,69.945274,57.303463,68.801865,65.75441,61.040707,-0.031303406,0.12044239,-0.16716242,0.096663,0.031303406,-0.07601309,0.88314307,0.67862815,-1.0304865,-0.043325555,1.0304865,"down","EFNB2",1948.0,"0001525 // angiogenesis // inferred from electronic annotation /// 0001945 // lymph vessel development // inferred from electronic annotation /// 0002042 // cell migration involved in sprouting angiogenesis // inferred from direct assay /// 0007155 // cell adhesion // inferred from direct assay /// 0007219 // Notch signaling pathway // inferred from electronic annotation /// 0007267 // cell-cell signaling // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0048013 // ephrin receptor signaling pathway // inferred from direct assay /// 0050920 // regulation of chemotaxis // inferred from direct assay","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005102 // receptor binding // inferred from electronic annotation /// 0046875 // ephrin receptor binding // inferred from physical interaction /// 0046875 // ephrin receptor binding // traceable author statement","chr13:107142097-107187462 (-) // 96.83 // q33.3"]
["11716279_x_at",319.8399,326.6292,330.0834,321.71906,303.85577,319.39368,-0.004225731,0.026078224,0.041254997,0.004225731,-0.078188896,-0.006239891,0.56161845,0.17660937,1.033666,0.047770113,1.033666,"up","CBX5",23468.0,"0007596 // blood coagulation // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation","0000118 // histone deacetylase complex // inferred from sequence or structural similarity /// 0000118 // histone deacetylase complex // inferred from electronic annotation /// 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from electronic annotation /// 0000792 // heterochromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation /// 0005720 // nuclear heterochromatin // traceable author statement /// 0005720 // nuclear heterochromatin // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0010369 // chromocenter // inferred from electronic annotation /// 0016605 // PML body // inferred from mutant phenotype /// 0017053 // transcriptional repressor complex // inferred from sequence or structural similarity /// 0017053 // transcriptional repressor complex // inferred from electronic annotation /// 0031618 // nuclear centromeric heterochromatin // non-traceable author statement /// 0035097 // histone methyltransferase complex // inferred from sequence or structural similarity /// 0035097 // histone methyltransferase complex // inferred from electronic annotation","0003682 // chromatin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0030674 // protein binding, bridging // inferred from sequence or structural similarity /// 0030674 // protein binding, bridging // inferred from electronic annotation /// 0035064 // methylated histone residue binding // inferred from direct assay /// 0042826 // histone deacetylase binding // inferred from electronic annotation /// 0070491 // repressing transcription factor binding // inferred from sequence or structural similarity /// 0070491 // repressing transcription factor binding // inferred from electronic annotation","chr12:54624727-54653329 (-) // 86.67 // q13.13"]
["11740011_at",49.53197,49.546707,48.89022,51.3052,50.07751,48.734985,-2.1457672E-4,2.1457672E-4,-0.019028664,0.050530434,0.015588284,-0.02361679,0.7459627,0.4104464,-1.0143181,-0.020510178,1.0143181,"down","ZFP14",57677.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:36827161-36858875 (-) // 51.76 // q13.12"]
["11758061_s_at",9.771903,10.35927,10.090093,10.613533,11.366435,10.92669,-0.10170221,-0.01749134,-0.05547428,0.01749134,0.11636615,0.05944276,0.3026771,0.031018352,-1.0887374,-0.12265598,1.0887374,"down","LINC00472",79940.0,"","","","chr6:72124150-72124589 (-) // 91.39 // q13"]
["11757510_x_at",647.7222,641.0288,654.72833,653.03,697.567,652.3363,-0.011007309,-0.025993347,0.0045137405,7.6675415E-4,0.09594917,-7.6675415E-4,0.64423543,0.26644054,-1.0301198,-0.042812094,1.0301198,"down","HP1BP3",50809.0,"0006334 // nucleosome assembly // inferred from electronic annotation","0000786 // nucleosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation","chr1:21069454-21070150 (-) // 56.47 // p36.12"]
["11725743_s_at",7.6612477,8.448838,7.70787,8.014399,7.4786453,7.869871,-0.02375698,0.11741686,-0.01500392,0.041258097,-0.058559418,0.01500392,0.8688079,0.6468985,1.0188802,0.026984498,1.0188802,"up","SORBS1",10580.0,"0006810 // transport // inferred from electronic annotation /// 0006936 // muscle contraction // traceable author statement /// 0007160 // cell-matrix adhesion // traceable author statement /// 0008286 // insulin receptor signaling pathway // inferred from sequence or structural similarity /// 0015758 // glucose transport // inferred from sequence or structural similarity /// 0032869 // cellular response to insulin stimulus // inferred from sequence or structural similarity /// 0043149 // stress fiber assembly // inferred from sequence or structural similarity /// 0045725 // positive regulation of glycogen biosynthetic process // inferred from sequence or structural similarity /// 0046326 // positive regulation of glucose import // inferred from sequence or structural similarity /// 0046889 // positive regulation of lipid biosynthetic process // inferred from sequence or structural similarity /// 0048041 // focal adhesion assembly // inferred from sequence or structural similarity /// 0090004 // positive regulation of establishment of protein localization in plasma membrane // inferred from sequence or structural similarity","0001725 // stress fiber // inferred from sequence or structural similarity /// 0001725 // stress fiber // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005899 // insulin receptor complex // inferred from direct assay /// 0005912 // adherens junction // inferred from electronic annotation /// 0005913 // cell-cell adherens junction // inferred from sequence or structural similarity /// 0005913 // cell-cell adherens junction // traceable author statement /// 0005915 // zonula adherens // traceable author statement /// 0005924 // cell-substrate adherens junction // inferred from sequence or structural similarity /// 0005925 // focal adhesion // inferred from direct assay /// 0005925 // focal adhesion // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0045121 // membrane raft // inferred from sequence or structural similarity","0003779 // actin binding // traceable author statement /// 0005070 // SH3/SH2 adaptor activity // inferred by curator /// 0005070 // SH3/SH2 adaptor activity // inferred from sequence or structural similarity /// 0005158 // insulin receptor binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008092 // cytoskeletal protein binding // traceable author statement /// 0019901 // protein kinase binding // inferred from electronic annotation","chr10:97071530-97321171 (-) // 98.14 // q24.1"]
["11755523_a_at",178.70737,165.20735,167.79755,156.93886,159.597,175.22906,0.10209894,-0.011221886,0.011221886,-0.085297585,-0.061066628,0.073741436,0.7322786,0.389496,1.0411952,0.058240503,1.0411952,"up","RBM47",54502.0,"","0005634 // nucleus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation","chr4:40426460-40468718 (-) // 93.19 // p14"]
["11753747_x_at",306.42252,296.75745,313.40894,284.08444,314.06763,285.08206,0.023118973,-0.023118973,0.05564308,-0.08608341,0.05867195,-0.08102608,0.7124616,0.35755056,1.0386385,0.05469357,1.0386385,"up","CHRAC1",54108.0,"0006338 // chromatin remodeling // non-traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0008622 // epsilon DNA polymerase complex // non-traceable author statement /// 0008623 // chromatin accessibility complex // non-traceable author statement","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003887 // DNA-directed DNA polymerase activity // non-traceable author statement /// 0003887 // DNA-directed DNA polymerase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016779 // nucleotidyltransferase activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr8:141521598-141525346 (+) // 100.0 // q24.3"]
["11736605_a_at",318.27222,310.61694,332.8741,308.0951,308.54062,292.8154,0.03996277,0.00483799,0.104678154,-0.006922722,-0.00483799,-0.08030701,0.46440896,0.10372223,1.0573958,0.08051552,1.0573958,"up","XPO7",23039.0,"0006611 // protein export from nucleus // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0051028 // mRNA transport // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005643 // nuclear pore // inferred from direct assay /// 0005643 // nuclear pore // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0005049 // nuclear export signal receptor activity // inferred from direct assay /// 0008565 // protein transporter activity // inferred from electronic annotation","chr8:21823748-21864091 (+) // 97.03 // p21.3"]
["11728770_at",5.5926523,6.470333,5.5926523,6.3475294,5.7122035,5.9226875,-0.05661702,0.15369034,-0.05661702,0.12604547,-0.026102304,0.026102304,0.91279817,0.74866426,-1.0199721,-0.02852967,1.0199721,"down","CFHR2",3080.0,"","0005576 // extracellular region // inferred from electronic annotation","","chr1:196912897-196928356 (+) // 97.8 // q31.3"]
["11746123_x_at",313.98087,341.97397,329.78244,332.01617,338.71024,330.19385,-0.07660675,0.046603203,-0.005768776,0.003970146,0.03276825,-0.003970146,0.834928,0.5743315,-1.0159622,-0.022846786,1.0159622,"down","YY1AP1",55249.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr1:155629246-155658085 (-) // 91.51 // q22"]
["11747846_s_at",7.7358713,8.082676,8.135833,8.733917,7.085708,7.768127,-0.03463602,0.028633356,0.03809023,0.14042902,-0.16128778,-0.028633118,0.92548126,0.77818036,1.0190276,0.027193114,1.0190276,"up","KHDRBS2",202559.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008143 // poly(A) RNA binding // inferred from electronic annotation /// 0008266 // poly(U) RNA binding // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0042169 // SH2 domain binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr6:62390261-62996132 (-) // 95.04 // q11.1"]
["11737290_at",6.501057,6.5392785,5.828213,7.0566506,6.8195834,7.312048,-0.038733244,-0.03027606,-0.19635391,0.079576015,0.03027606,0.13086796,0.36380747,0.05131383,-1.1240408,-0.16869445,1.1240408,"down","OXGR1",27199.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0035589 // G-protein coupled purinergic nucleotide receptor signaling pathway // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0045028 // G-protein coupled purinergic nucleotide receptor activity // inferred from electronic annotation","chr13:97637972-97646604 (-) // 92.05 // q32.1"]
["11734188_x_at",8.603182,7.696614,7.5766797,7.532818,7.3222623,7.506876,0.18749285,0.026846409,0.0041880608,-0.0041878223,-0.045088053,-0.009165049,0.5794454,0.19339482,1.0660852,0.09232277,1.0660852,"up","GP6",51206.0,"0007167 // enzyme linked receptor protein signaling pathway // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0007596 // blood coagulation // inferred from electronic annotation /// 0007599 // hemostasis // inferred from electronic annotation /// 0030168 // platelet activation // non-traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0050900 // leukocyte migration // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005518 // collagen binding // traceable author statement","chr19:55525212-55544233 (-) // 67.58 // q13.42"]
["11764176_at",9.006011,8.683224,10.004309,9.162071,9.633038,8.928952,-0.012392759,-0.065050125,0.13926864,0.012392759,0.08470988,-0.024790049,0.98858064,0.96211815,-1.0024259,-0.0034956087,1.0024259,"down","","","","","","chr6:30644213-30644652 (+) // 100.0 // p21.33"]
["11733796_s_at",508.04095,493.7078,516.596,500.48206,507.68845,522.4199,5.00679E-4,-0.040786743,0.0245924,-0.021125793,-5.00679E-4,0.040765762,0.884607,0.6824787,-1.0080806,-0.011610995,1.0080806,"down","RCAN1",1827.0,"0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007417 // central nervous system development // traceable author statement /// 0007519 // skeletal muscle tissue development // inferred from electronic annotation /// 0008015 // blood circulation // traceable author statement /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0019722 // calcium-mediated signaling // inferred from electronic annotation /// 0043627 // response to estrogen stimulus // inferred from electronic annotation /// 0043666 // regulation of phosphoprotein phosphatase activity // inferred from electronic annotation /// 0048741 // skeletal muscle fiber development // inferred from electronic annotation /// 0051151 // negative regulation of smooth muscle cell differentiation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation","0003677 // DNA binding // traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr21:35888781-35899308 (-) // 98.83 // q22.12"]
["11737484_at",14.836824,14.51071,13.733433,14.405851,13.700453,13.39211,0.07700896,0.044944525,-0.034481287,0.034481287,-0.037950277,-0.07079029,0.6720827,0.3011531,1.0380749,0.05391047,1.0380749,"up","C9orf129",445577.0,"","","","chr9:96080471-96108696 (-) // 98.73 // q22.31"]
["11719784_x_at",68.8676,73.38011,78.899086,72.78495,73.20734,74.74831,-0.0898633,0.0017004013,0.10632038,-0.010047913,-0.0016999245,0.02835226,0.9978758,0.99328995,1.0003589,5.1774684E-4,1.0003589,"up","RPS23",6228.0,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // inferred by curator /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral infectious cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // non-traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0015935 // small ribosomal subunit // inferred from electronic annotation /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr5:81569560-81574396 (-) // 67.09 // q14.2"]
["11724811_at",49.07381,58.68116,54.534916,63.81292,57.040745,53.082397,-0.18463326,0.07331085,-0.03240633,0.19426203,0.03240633,-0.07135296,0.74386305,0.40666863,-1.0715368,-0.09968137,1.0715368,"down","ZNF346",23567.0,"0006915 // apoptotic process // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003725 // double-stranded RNA binding // inferred from direct assay /// 0003725 // double-stranded RNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr5:176449689-176493947 (+) // 79.63 // q35.2"]
["11747394_a_at",144.04068,147.76736,150.05714,159.54068,158.94719,147.17,-0.047943592,-0.011092186,0.011092186,0.09950447,0.094127655,-0.016935825,0.52735734,0.14676751,-1.0532734,-0.07488002,1.0532734,"down","ORC3",23595.0,"0000075 // cell cycle checkpoint // traceable author statement /// 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000084 // S phase of mitotic cell cycle // traceable author statement /// 0000216 // M/G1 transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006260 // DNA replication // traceable author statement /// 0006260 // DNA replication // inferred from electronic annotation","0000808 // origin recognition complex // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005664 // nuclear origin of replication recognition complex // inferred from direct assay /// 0005664 // nuclear origin of replication recognition complex // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003688 // DNA replication origin binding // traceable author statement","chr6:88299853-88372760 (+) // 99.28 // q15"]
["AFFX-BkGr-GC19_at",34.00082,34.490467,32.666855,33.674698,34.66254,34.081425,-0.0017080307,0.018919945,-0.05945015,-0.015612602,0.026099682,0.0017080307,0.81373036,0.5295384,-1.0126562,-0.018144473,1.0126562,"down",-0.015612602,0.026099682,0.0017080307,-0.0017080307,0.018919945,-0.05945015]
["11743755_s_at",116.860825,122.79145,140.66089,123.651115,125.30066,121.052605,-0.07645178,-0.0050325394,0.19097853,0.0050325394,0.024151325,-0.02560854,0.8862612,0.68630207,1.0247743,0.03530622,1.0247743,"up","ZFAND5",7763.0,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0001944 // vasculature development // inferred from electronic annotation /// 0003016 // respiratory system process // inferred from electronic annotation /// 0010761 // fibroblast migration // inferred from electronic annotation /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from electronic annotation /// 0048705 // skeletal system morphogenesis // inferred from electronic annotation /// 0048745 // smooth muscle tissue development // inferred from electronic annotation /// 0060324 // face development // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:74966044-74980163 (-) // 85.1 // q21.13"]
["11752482_a_at",40.82296,43.103775,42.977577,41.329132,43.161655,39.16471,-0.045990944,0.03244257,0.028212547,-0.028212547,0.03437853,-0.10581732,0.7831633,0.47071,1.0267644,0.03810517,1.0267644,"up","FBN2",2201.0,"0009653 // anatomical structure morphogenesis // traceable author statement /// 0030326 // embryonic limb morphogenesis // inferred from electronic annotation /// 0030501 // positive regulation of bone mineralization // inferred from sequence or structural similarity /// 0030501 // positive regulation of bone mineralization // inferred from electronic annotation /// 0035108 // limb morphogenesis // inferred from electronic annotation /// 0035583 // sequestering of TGFbeta in extracellular matrix // inferred from sequence or structural similarity /// 0035583 // sequestering of TGFbeta in extracellular matrix // inferred from electronic annotation /// 0045669 // positive regulation of osteoblast differentiation // inferred from sequence or structural similarity /// 0045669 // positive regulation of osteoblast differentiation // inferred from electronic annotation /// 0060346 // bone trabecula formation // inferred from sequence or structural similarity /// 0060346 // bone trabecula formation // inferred from electronic annotation","0001527 // microfibril // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // traceable author statement /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation","0005201 // extracellular matrix structural constituent // inferred from electronic annotation /// 0005201 // extracellular matrix structural constituent // traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation","chr5:127777694-127873916 (-) // 95.43 // q23.3"]
["11761283_at",20.503937,19.781813,14.108483,20.200178,18.808273,17.87248,0.08813,0.036403656,-0.4512081,0.066596985,-0.036403656,-0.11003113,0.8790971,0.67011064,-1.058689,-0.08227884,1.058689,"down","SMYD3",64754.0,"0016568 // chromatin modification // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation /// 0034968 // histone lysine methylation // inferred from sequence or structural similarity /// 0034968 // histone lysine methylation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0008168 // methyltransferase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0018024 // histone-lysine N-methyltransferase activity // inferred from sequence or structural similarity /// 0018024 // histone-lysine N-methyltransferase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:246489117-246670614 (-) // 97.02 // q44"]
["11740955_a_at",29.44482,30.18642,29.194597,35.112434,29.80556,26.734558,-0.008783817,0.027101994,-0.02109623,0.24518442,0.008783817,-0.1480918,0.9216195,0.76895845,-1.0254223,-0.036218226,1.0254223,"down","PLEKHN1",84069.0,"","","0005543 // phospholipid binding // inferred from electronic annotation","chr1:901876-910478 (+) // 98.84 // p36.33"]
["11757435_x_at",1168.636,1117.1288,1106.7693,1047.7551,1112.5096,1070.4608,0.074739456,0.009709358,-0.0037317276,-0.08278465,0.0037317276,-0.051854134,0.4832115,0.114375815,1.0501107,0.07054142,1.0501107,"up","BIN1",274.0,"0006897 // endocytosis // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0030100 // regulation of endocytosis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0042692 // muscle cell differentiation // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045807 // positive regulation of endocytosis // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement /// 0043196 // varicosity // inferred from electronic annotation /// 0043679 // axon terminus // inferred from electronic annotation /// 0044300 // cerebellar mossy fiber // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0051020 // GTPase binding // inferred from electronic annotation","chr2:127805606-127806095 (-) // 99.8 // q14.3"]
["11727991_at",48.209423,56.9469,50.209087,64.37576,56.34222,54.787342,-0.2047143,0.03558731,-0.14608097,0.21248817,0.020186901,-0.020187378,0.5433703,0.15941662,-1.1296678,-0.17589852,1.1296678,"down","STX11",8676.0,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006944 // cellular membrane fusion // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation","0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005484 // SNAP receptor activity // inferred from electronic annotation /// 0005484 // SNAP receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr6:144471653-144513075 (+) // 80.96 // q24.2"]
["11732980_x_at",7.600334,7.8367677,7.4949746,9.383824,7.715371,7.1272435,-0.010836363,0.033359528,-0.030975819,0.2932768,0.010836363,-0.103554964,0.8432671,0.5910228,-1.0494767,-0.06967019,1.0494767,"down","IFNA21",3452.0,"0006952 // defense response // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0009615 // response to virus // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0060337 // type I interferon-mediated signaling pathway // traceable author statement /// 0060338 // regulation of type I interferon-mediated signaling pathway // traceable author statement","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation","0005125 // cytokine activity // inferred from electronic annotation /// 0005126 // cytokine receptor binding // inferred from electronic annotation /// 0005126 // cytokine receptor binding // traceable author statement","chr9:21165635-21166659 (-) // 86.94 // p21.3"]
["11730647_at",8.122907,9.090062,7.943007,9.231242,8.203353,9.501784,-0.08825612,0.07403827,-0.120566845,0.09627271,-0.07403827,0.1379466,0.6922345,0.32878518,-1.0705276,-0.09832193,1.0705276,"down","SIRPD",128646.0,"","0005576 // extracellular region // inferred from electronic annotation","","chr20:1514897-1538392 (-) // 88.83 // p13"]
["11761707_x_at",7.3137193,8.022304,7.9093957,8.609682,7.9093957,9.258306,-0.12318683,0.010224342,-0.010224581,0.112167835,-0.010224581,0.21695614,0.5047823,0.13059655,-1.1075425,-0.14736208,1.1075425,"down","PTPLA",9200.0,"0006470 // protein dephosphorylation // traceable author statement /// 0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007275 // multicellular organismal development // traceable author statement /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // traceable author statement","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004725 // protein tyrosine phosphatase activity // traceable author statement /// 0016829 // lyase activity // inferred from electronic annotation","chr10:17644904-17659373 (-) // 79.49 // p12.33"]
["11760263_x_at",53.30565,48.910717,44.02671,41.158176,45.852745,48.81359,0.17214298,0.048005104,-0.10376644,-0.20096636,-0.045137405,0.045137405,0.72590053,0.38035747,1.076078,0.10578273,1.076078,"up","STARD3",10948.0,"0006629 // lipid metabolic process // traceable author statement /// 0006694 // steroid biosynthetic process // inferred from electronic annotation /// 0006701 // progesterone biosynthetic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006839 // mitochondrial transport // traceable author statement /// 0006869 // lipid transport // inferred from electronic annotation /// 0008202 // steroid metabolic process // traceable author statement /// 0008203 // cholesterol metabolic process // traceable author statement /// 0030301 // cholesterol transport // inferred from electronic annotation","0005737 // cytoplasm // traceable author statement /// 0005768 // endosome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031902 // late endosome membrane // inferred from electronic annotation","0008289 // lipid binding // inferred from electronic annotation /// 0015485 // cholesterol binding // inferred from direct assay /// 0015485 // cholesterol binding // inferred from electronic annotation /// 0017127 // cholesterol transporter activity // inferred from electronic annotation","chr17:37793391-37819708 (+) // 98.92 // q12"]
["11737751_x_at",151.34662,157.90346,150.91718,157.8583,160.76146,145.08832,-0.030386925,0.030798912,-0.034486294,0.030386925,0.056678295,-0.09131193,0.95113933,0.8527614,-1.0069155,-0.0099425465,1.0069155,"down","C10orf57",80195.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr10:81838418-81852306 (+) // 95.96 // q22.3"]
["11757332_x_at",3729.716,3730.1104,3637.4663,3852.9429,3847.977,3888.3953,-0.022592545,-0.022439957,-0.05872631,0.024301529,0.022439957,0.03751564,0.1835705,0.008447328,-1.0443983,-0.06267203,1.0443983,"down","DDX5",1655.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000381 // regulation of alternative nuclear mRNA splicing, via spliceosome // inferred from direct assay /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0016049 // cell growth // non-traceable author statement /// 0033148 // positive regulation of intracellular estrogen receptor signaling pathway // inferred from direct assay /// 0043517 // positive regulation of DNA damage response, signal transduction by p53 class mediator // inferred from mutant phenotype /// 0045667 // regulation of osteoblast differentiation // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0060765 // regulation of androgen receptor signaling pathway // inferred from mutant phenotype /// 0072332 // signal transduction by p53 class mediator resulting in induction of apoptosis // inferred from mutant phenotype /// 2001014 // regulation of skeletal muscle cell differentiation // inferred from sequence or structural similarity","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003712 // transcription cofactor activity // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0003724 // RNA helicase activity // inferred from mutant phenotype /// 0003724 // RNA helicase activity // non-traceable author statement /// 0003724 // RNA helicase activity // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016818 // hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides // inferred from electronic annotation /// 0030331 // estrogen receptor binding // inferred from direct assay /// 0036002 // pre-mRNA binding // inferred from direct assay /// 0050681 // androgen receptor binding // inferred from direct assay","chr17:62495747-62498171 (-) // 80.03 // q23.3"]
["11746444_at",13.676447,15.267217,15.997276,13.828364,16.067562,15.1879225,-0.15498734,0.0037562847,0.071145535,-0.13905025,0.0774703,-0.0037562847,0.9877622,0.95998466,-1.0034137,-0.004916508,1.0034137,"down","RPS20",6224.0,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // inferred by curator /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral infectious cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0015935 // small ribosomal subunit // inferred from electronic annotation /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003723 // RNA binding // non-traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // inferred from direct assay /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0003735 // structural constituent of ribosome // inferred from electronic annotation","chr8:56982261-56987066 (-) // 49.54 // q12.1"]
["11722006_a_at",31.65605,32.297733,40.361504,34.85316,33.032246,33.636276,-0.074465275,-0.04551363,0.2760334,0.064342976,-0.013071537,0.013071537,0.9343391,0.8028382,1.021416,0.03057049,1.021416,"up","KLHL25",64410.0,"","0005737 // cytoplasm // inferred from direct assay","","chr15:86302556-86338261 (-) // 99.5 // q25.3"]
["11721345_at",187.2073,187.68602,173.9159,184.2218,183.22351,183.42189,0.026331425,0.030015945,-0.07991505,0.0031385422,-0.004700184,-0.0031385422,0.95783234,0.8702463,-1.0043688,-0.0062890924,1.0043688,"down","PLEK2",26499.0,"0030036 // actin cytoskeleton organization // traceable author statement /// 0035556 // intracellular signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031258 // lamellipodium membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005543 // phospholipid binding // inferred from electronic annotation","chr14:67853189-67878917 (-) // 95.87 // q23.3"]
["11717524_s_at",408.1505,408.7718,397.64963,438.21252,440.0407,437.2695,-0.050807953,-0.04861355,-0.08841133,0.051721573,0.057727814,0.04861355,0.08796024,9.4372075E-4,-1.0831993,-0.11529866,1.0831993,"down","RDX",5962.0,"0030033 // microvillus assembly // inferred from electronic annotation /// 0045176 // apical protein localization // inferred from electronic annotation /// 0051693 // actin filament capping // inferred from electronic annotation","0001726 // ruffle // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005902 // microvillus // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0019898 // extrinsic to membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030175 // filopodium // inferred from electronic annotation /// 0032154 // cleavage furrow // inferred from electronic annotation /// 0032420 // stereocilium // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008092 // cytoskeletal protein binding // inferred from electronic annotation","chr11:110100174-110167701 (-) // 92.23 // q22.3"]
["11723392_a_at",18.622595,19.219465,22.959585,17.439545,20.552864,17.47727,-0.022757053,0.022757053,0.27928543,-0.11744881,0.11952829,-0.114331245,0.7052662,0.34661385,1.0946825,0.13051243,1.0946825,"up","ALPK3",57538.0,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007507 // heart development // inferred from sequence or structural similarity /// 0007507 // heart development // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation","0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr15:85359910-85416787 (+) // 78.38 // q25.3"]
["11717236_x_at",8607.809,8562.085,8645.851,8538.363,8570.715,8479.182,0.006958008,-7.266998E-4,0.013319969,-0.004729271,7.276535E-4,-0.014762878,0.46448123,0.10391928,1.0088922,0.012772,1.0088922,"up","RPS7",6201.0,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006364 // rRNA processing // inferred from mutant phenotype /// 0006412 // translation // inferred by curator /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral infectious cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0042274 // ribosomal small subunit biogenesis // inferred from mutant phenotype /// 0044267 // cellular protein metabolic process // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from direct assay /// 0005840 // ribosome // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0022627 // cytosolic small ribosomal subunit // non-traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0030686 // 90S preribosome // not recorded /// 0032040 // small-subunit processome // not recorded","0003723 // RNA binding // non-traceable author statement /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr2:3622832-3628093 (+) // 43.59 // p25.3"]
["11745829_a_at",70.41983,63.336567,69.8458,72.70731,63.65912,71.2479,0.0059041977,-0.14703941,-0.0059041977,0.05202198,-0.1397109,0.022769451,0.9096544,0.74102867,-1.0191549,-0.02737335,1.0191549,"down","BTAF1",9044.0,"0045892 // negative regulation of transcription, DNA-dependent // non-traceable author statement","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0004386 // helicase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr10:93683525-93790754 (+) // 97.92 // q23.32"]
["11728000_a_at",64.139046,57.489677,67.15311,58.548725,60.72554,54.82054,0.10523224,-0.052668095,0.17148304,-0.026332378,0.026332855,-0.12125397,0.60636914,0.22018093,1.0830503,0.11510018,1.0830503,"up","CERS1 /// GDF1","10715 /// 2657","0001701 // in utero embryonic development // inferred from electronic annotation /// 0006665 // sphingolipid metabolic process // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0007492 // endoderm development // inferred from electronic annotation /// 0007498 // mesoderm development // inferred from electronic annotation /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0030148 // sphingolipid biosynthetic process // traceable author statement /// 0040007 // growth // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046513 // ceramide biosynthetic process // inferred from electronic annotation /// 0046513 // ceramide biosynthetic process // inferred from sequence or structural similarity","0000139 // Golgi membrane // inferred from electronic annotation /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005792 // microsome // inferred from sequence or structural similarity /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005125 // cytokine activity // inferred from electronic annotation /// 0008083 // growth factor activity // inferred from electronic annotation /// 0050291 // sphingosine N-acyltransferase activity // inferred from electronic annotation /// 0050291 // sphingosine N-acyltransferase activity // inferred from sequence or structural similarity","chr19:18988717-19006953 (-) // 85.91 // p13.11"]
["11739424_a_at",7.1631956,6.8240623,7.047528,5.927469,6.5646057,6.0136447,0.09793377,0.027961254,0.07444763,-0.17525339,-0.027961254,-0.15442991,0.26296496,0.021018032,1.1376019,0.18599571,1.1376019,"up","DPYSL5",56896.0,"0006208 // pyrimidine base catabolic process // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007399 // nervous system development // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0030182 // neuron differentiation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0030425 // dendrite // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0016787 // hydrolase activity // inferred from electronic annotation /// 0016810 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds // inferred from electronic annotation /// 0016812 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides // inferred from electronic annotation","chr2:27070968-27173219 (+) // 89.78 // p23.3"]
["11727295_a_at",167.0282,157.40608,173.42207,157.54068,159.37402,162.0053,0.055862904,-0.029737473,0.110058784,-0.028504372,-0.01181221,0.011811733,0.64241743,0.26453245,1.0387845,0.054896396,1.0387845,"up","ZNF434",54925.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016032 // viral reproduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:3432085-3447793 (-) // 96.36 // p13.3"]
["11760347_x_at",101.73216,104.27289,95.577835,110.219955,99.79812,106.860435,-0.017794132,0.017794132,-0.10782242,0.09781551,-0.045485497,0.053157806,0.6516721,0.27649188,-1.0505198,-0.07110339,1.0505198,"down","HES1",3280.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0003151 // outflow tract morphogenesis // inferred from sequence or structural similarity /// 0003151 // outflow tract morphogenesis // inferred from electronic annotation /// 0003266 // regulation of secondary heart field cardioblast proliferation // inferred from electronic annotation /// 0003281 // ventricular septum development // inferred from sequence or structural similarity /// 0003281 // ventricular septum development // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006461 // protein complex assembly // inferred from sequence or structural similarity /// 0006461 // protein complex assembly // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007219 // Notch signaling pathway // inferred from direct assay /// 0007219 // Notch signaling pathway // inferred from mutant phenotype /// 0007219 // Notch signaling pathway // traceable author statement /// 0007224 // smoothened signaling pathway // inferred from electronic annotation /// 0007262 // STAT protein import into nucleus // inferred from sequence or structural similarity /// 0007262 // STAT protein import into nucleus // inferred from electronic annotation /// 0007389 // pattern specification process // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from sequence or structural similarity /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0016477 // cell migration // inferred from electronic annotation /// 0021537 // telencephalon development // inferred from electronic annotation /// 0021555 // midbrain-hindbrain boundary morphogenesis // inferred from electronic annotation /// 0021557 // oculomotor nerve development // inferred from electronic annotation /// 0021558 // trochlear nerve development // inferred from electronic annotation /// 0021575 // hindbrain morphogenesis // inferred from electronic annotation /// 0021861 // forebrain radial glial cell differentiation // inferred from sequence or structural similarity /// 0021915 // neural tube development // inferred from electronic annotation /// 0021983 // pituitary gland development // inferred from electronic annotation /// 0021984 // adenohypophysis development // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0030513 // positive regulation of BMP signaling pathway // inferred from electronic annotation /// 0030901 // midbrain development // inferred from electronic annotation /// 0031016 // pancreas development // inferred from electronic annotation /// 0031018 // endocrine pancreas development // traceable author statement /// 0035019 // somatic stem cell maintenance // inferred from electronic annotation /// 0042102 // positive regulation of T cell proliferation // inferred from electronic annotation /// 0042491 // auditory receptor cell differentiation // inferred from electronic annotation /// 0042517 // positive regulation of tyrosine phosphorylation of Stat3 protein // inferred from sequence or structural similarity /// 0042517 // positive regulation of tyrosine phosphorylation of Stat3 protein // inferred from electronic annotation /// 0042668 // auditory receptor cell fate determination // inferred from electronic annotation /// 0043388 // positive regulation of DNA binding // inferred from sequence or structural similarity /// 0043388 // positive regulation of DNA binding // inferred from electronic annotation /// 0045165 // cell fate commitment // inferred from electronic annotation /// 0045596 // negative regulation of cell differentiation // inferred from electronic annotation /// 0045598 // regulation of fat cell differentiation // inferred from electronic annotation /// 0045608 // negative regulation of auditory receptor cell differentiation // inferred from electronic annotation /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0045747 // positive regulation of Notch signaling pathway // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046331 // lateral inhibition // inferred from electronic annotation /// 0046427 // positive regulation of JAK-STAT cascade // inferred from sequence or structural similarity /// 0046427 // positive regulation of JAK-STAT cascade // inferred from electronic annotation /// 0048469 // cell maturation // inferred from electronic annotation /// 0048505 // regulation of timing of cell differentiation // inferred from electronic annotation /// 0048538 // thymus development // inferred from sequence or structural similarity /// 0048538 // thymus development // inferred from electronic annotation /// 0048667 // cell morphogenesis involved in neuron differentiation // inferred from electronic annotation /// 0048711 // positive regulation of astrocyte differentiation // inferred from sequence or structural similarity /// 0048711 // positive regulation of astrocyte differentiation // inferred from electronic annotation /// 0048715 // negative regulation of oligodendrocyte differentiation // inferred from sequence or structural similarity /// 0048715 // negative regulation of oligodendrocyte differentiation // inferred from electronic annotation /// 0048844 // artery morphogenesis // inferred from sequence or structural similarity /// 0048844 // artery morphogenesis // inferred from electronic annotation /// 0050767 // regulation of neurogenesis // inferred from electronic annotation /// 0060037 // pharyngeal system development // inferred from sequence or structural similarity /// 0060037 // pharyngeal system development // inferred from electronic annotation /// 0060164 // regulation of timing of neuron differentiation // inferred from electronic annotation /// 0060253 // negative regulation of glial cell proliferation // inferred from sequence or structural similarity /// 0060253 // negative regulation of glial cell proliferation // inferred from electronic annotation /// 0060675 // ureteric bud morphogenesis // inferred from electronic annotation /// 0061009 // common bile duct development // inferred from electronic annotation /// 0061106 // negative regulation of stomach neuroendocrine cell differentiation // inferred from electronic annotation /// 0061309 // cardiac neural crest cell development involved in outflow tract morphogenesis // inferred from electronic annotation /// 0072012 // glomerulus vasculature development // inferred from electronic annotation /// 0072049 // comma-shaped body morphogenesis // inferred from electronic annotation /// 0072050 // S-shaped body morphogenesis // inferred from electronic annotation /// 0072141 // renal interstitial cell development // inferred from electronic annotation /// 0072282 // metanephric nephron tubule morphogenesis // inferred from electronic annotation /// 0090102 // cochlea development // inferred from electronic annotation /// 0097084 // vascular smooth muscle cell development // inferred from sequence or structural similarity /// 0097084 // vascular smooth muscle cell development // inferred from electronic annotation /// 0097150 // neuronal stem cell maintenance // inferred from expression pattern /// 0097150 // neuronal stem cell maintenance // inferred from electronic annotation /// 2000227 // negative regulation of pancreatic A cell differentiation // inferred from electronic annotation /// 2000737 // negative regulation of stem cell differentiation // inferred from mutant phenotype /// 2000974 // negative regulation of pro-B cell differentiation // inferred from mutant phenotype /// 2000978 // negative regulation of forebrain neuron differentiation // inferred from sequence or structural similarity /// 2000981 // negative regulation of inner ear receptor cell differentiation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0000981 // sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from electronic annotation /// 0001078 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription // inferred from sequence or structural similarity /// 0001078 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // non-traceable author statement /// 0042803 // protein homodimerization activity // inferred from sequence or structural similarity /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0042826 // histone deacetylase binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from sequence or structural similarity /// 0071820 // N-box binding // inferred from sequence or structural similarity /// 0071820 // N-box binding // inferred from electronic annotation","chr3:193853936-193855073 (+) // 99.21 // q29"]
["11755631_x_at",102.679436,104.30091,107.64022,104.258,93.39212,95.228615,-0.011005402,0.011599064,0.057064533,0.011005402,-0.14777994,-0.11968565,0.48927692,0.11868642,1.0752753,0.10470608,1.0752753,"up","RMND1",55005.0,"","0005739 // mitochondrion // inferred from electronic annotation","","chr6:151726023-151765760 (-) // 72.76 // q25.1"]
["11734898_at",72.40984,81.02549,79.86159,83.43276,82.84203,98.227554,-0.17818308,-0.015993595,-0.036868095,0.026245117,0.015993118,0.2617588,0.5094496,0.13390025,-1.1315868,-0.17834724,1.1315868,"down","IPP",3652.0,"","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement","0003779 // actin binding // inferred from electronic annotation /// 0003779 // actin binding // traceable author statement","chr1:46162729-46216485 (-) // 84.53 // p34.1"]
["11736559_a_at",6.730636,6.978211,6.896324,6.730636,5.469799,7.527329,-0.0175426,0.034571886,0.017542362,-0.0175426,-0.3167975,0.14385247,0.85206413,0.6101155,1.0533755,0.075019784,1.0533755,"up","MAP2",4133.0,"0001578 // microtubule bundle formation // inferred from electronic annotation /// 0007026 // negative regulation of microtubule depolymerization // inferred from electronic annotation /// 0007409 // axonogenesis // inferred from electronic annotation /// 0016358 // dendrite development // inferred from electronic annotation /// 0018107 // peptidyl-threonine phosphorylation // inferred from electronic annotation /// 0021954 // central nervous system neuron development // inferred from expression pattern /// 0031175 // neuron projection development // inferred from expression pattern /// 0048813 // dendrite morphogenesis // inferred from expression pattern /// 0071310 // cellular response to organic substance // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005875 // microtubule associated complex // traceable author statement /// 0005875 // microtubule associated complex // non-traceable author statement /// 0019718 // rough microsome // inferred from electronic annotation /// 0019719 // smooth microsome // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0034399 // nuclear periphery // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043198 // dendritic shaft // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0044297 // cell body // inferred from electronic annotation","0002162 // dystroglycan binding // inferred from physical interaction /// 0005198 // structural molecule activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0015631 // tubulin binding // inferred from electronic annotation","chr2:210444144-210598834 (+) // 98.23 // q34"]
["11737288_a_at",55.791164,51.087643,55.442745,57.30318,54.331238,60.040718,0.0045189857,-0.122543335,-0.0045189857,0.043097496,-0.033735752,0.11042404,0.62213624,0.23875886,-1.057587,-0.080776386,1.057587,"down","TIRAP",114609.0,"0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0006954 // inflammatory response // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from sequence or structural similarity /// 0008063 // Toll signaling pathway // traceable author statement /// 0030099 // myeloid cell differentiation // inferred from sequence or structural similarity /// 0030890 // positive regulation of B cell proliferation // inferred from sequence or structural similarity /// 0032496 // response to lipopolysaccharide // inferred from direct assay /// 0032648 // regulation of interferon-beta production // inferred from sequence or structural similarity /// 0032735 // positive regulation of interleukin-12 production // inferred from sequence or structural similarity /// 0032738 // positive regulation of interleukin-15 production // inferred from direct assay /// 0032757 // positive regulation of interleukin-8 production // inferred from mutant phenotype /// 0032760 // positive regulation of tumor necrosis factor production // inferred from mutant phenotype /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034137 // positive regulation of toll-like receptor 2 signaling pathway // inferred from mutant phenotype /// 0034141 // positive regulation of toll-like receptor 3 signaling pathway // inferred from sequence or structural similarity /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0034145 // positive regulation of toll-like receptor 4 signaling pathway // inferred from mutant phenotype /// 0035665 // TIRAP-dependent toll-like receptor 4 signaling pathway // inferred from direct assay /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from mutant phenotype /// 0044130 // negative regulation of growth of symbiont in host // inferred from sequence or structural similarity /// 0045087 // innate immune response // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation /// 0045088 // regulation of innate immune response // inferred by curator /// 0045410 // positive regulation of interleukin-6 biosynthetic process // inferred from mutant phenotype /// 0046330 // positive regulation of JNK cascade // inferred from mutant phenotype /// 0050830 // defense response to Gram-positive bacterium // inferred from sequence or structural similarity /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from mutant phenotype /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from mutant phenotype /// 0070935 // 3'-UTR-mediated mRNA stabilization // inferred from direct assay /// 0071221 // cellular response to bacterial lipopeptide // inferred from sequence or structural similarity /// 0071223 // cellular response to lipoteichoic acid // inferred from sequence or structural similarity /// 0090023 // positive regulation of neutrophil chemotaxis // inferred from sequence or structural similarity /// 0090073 // positive regulation of protein homodimerization activity // inferred from direct assay /// 2000340 // positive regulation of chemokine (C-X-C motif) ligand 1 production // inferred from sequence or structural similarity /// 2000343 // positive regulation of chemokine (C-X-C motif) ligand 2 production // inferred from sequence or structural similarity","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0030139 // endocytic vesicle // inferred from sequence or structural similarity /// 0032587 // ruffle membrane // inferred from sequence or structural similarity","0005080 // protein kinase C binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0005546 // phosphatidylinositol-4,5-bisphosphate binding // inferred from sequence or structural similarity /// 0030674 // protein binding, bridging // non-traceable author statement /// 0035662 // Toll-like receptor 4 binding // inferred from physical interaction /// 0035663 // Toll-like receptor 2 binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from sequence or structural similarity /// 0046982 // protein heterodimerization activity // inferred from direct assay","chr11:126152981-126164828 (+) // 92.73 // q24.2"]
["11750600_x_at",5.664211,5.5114527,5.295874,5.169605,5.877363,4.8244343,0.06822419,0.02878189,-0.02878189,-0.063596725,0.12151837,-0.16329098,0.8227601,0.5470288,1.0409238,0.057864506,1.0409238,"up","CLCA3P",9629.0,"0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0006821 // chloride transport // inferred from electronic annotation /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0070588 // calcium ion transmembrane transport // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0034707 // chloride channel complex // inferred from electronic annotation","0005215 // transporter activity // traceable author statement /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005254 // chloride channel activity // inferred from electronic annotation /// 0005262 // calcium channel activity // inferred from electronic annotation","chr1:87099958-87121059 (+) // 98.62 // p22.3"]
["11740024_a_at",299.1766,299.2486,289.0222,277.7071,263.46103,288.41986,0.051321983,0.05166912,0.0015048981,-0.056111336,-0.1320858,-0.0015048981,0.41972312,0.0767729,1.0703377,0.09806599,1.0703377,"up","RUFY1",80230.0,"0006810 // transport // inferred from electronic annotation /// 0006897 // endocytosis // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr5:178986692-179037019 (+) // 99.25 // q35.3"]
["11747399_x_at",24.870777,22.413042,20.625631,22.239998,20.725155,21.44329,0.18761015,0.037497044,-0.08240318,0.026315212,-0.07545853,-0.026315212,0.7601963,0.43271628,1.0516982,0.07272077,1.0516982,"up","PLAT",5327.0,"0001666 // response to hypoxia // inferred from electronic annotation /// 0006464 // cellular protein modification process // traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0006508 // proteolysis // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0014909 // smooth muscle cell migration // inferred from electronic annotation /// 0031639 // plasminogen activation // inferred from direct assay /// 0035249 // synaptic transmission, glutamatergic // inferred from electronic annotation /// 0042730 // fibrinolysis // traceable author statement /// 0043434 // response to peptide hormone stimulus // inferred from electronic annotation /// 0045861 // negative regulation of proteolysis // inferred from direct assay /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from electronic annotation /// 0048167 // regulation of synaptic plasticity // inferred from electronic annotation /// 0048514 // blood vessel morphogenesis // inferred from electronic annotation /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation /// 0051591 // response to cAMP // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0030141 // secretory granule // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from direct assay /// 0045177 // apical part of cell // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from direct assay /// 0004252 // serine-type endopeptidase activity // traceable author statement /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr8:42033078-42065083 (-) // 99.75 // p11.21"]
["11717496_a_at",1362.1454,1359.1934,1312.0231,1364.8845,1316.1422,1369.7083,0.0015649796,-0.0015649796,-0.05252266,0.004463196,-0.048000336,0.009552956,0.94030607,0.8198243,-1.0042925,-0.006179498,1.0042925,"down","IMPA2",3613.0,"0006021 // inositol biosynthetic process // inferred from electronic annotation /// 0006796 // phosphate-containing compound metabolic process // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0046854 // phosphatidylinositol phosphorylation // inferred from electronic annotation /// 0046855 // inositol phosphate dephosphorylation // inferred from direct assay","0005737 // cytoplasm // inferred from direct assay","0008934 // inositol monophosphate 1-phosphatase activity // inferred from direct assay /// 0008934 // inositol monophosphate 1-phosphatase activity // inferred from electronic annotation /// 0008934 // inositol monophosphate 1-phosphatase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0052832 // inositol monophosphate 3-phosphatase activity // inferred from electronic annotation /// 0052833 // inositol monophosphate 4-phosphatase activity // inferred from electronic annotation /// 0052834 // inositol monophosphate phosphatase activity // inferred from electronic annotation","chr18:11981426-12030876 (+) // 90.6 // p11.21"]
["11739708_x_at",7.3798337,8.966109,7.3247952,7.5356207,7.43148,6.9276476,-0.005030632,0.27586317,-0.015830517,0.025107384,0.0050303936,-0.096253395,0.71060133,0.35573763,1.0770156,0.1070392,1.0770156,"up","CACYBP",27101.0,"0007507 // heart development // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0045740 // positive regulation of DNA replication // inferred from electronic annotation /// 0055007 // cardiac muscle cell differentiation // inferred from electronic annotation /// 0060416 // response to growth hormone stimulus // inferred from electronic annotation /// 0060548 // negative regulation of cell death // inferred from electronic annotation /// 0071277 // cellular response to calcium ion // inferred from electronic annotation","0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005641 // nuclear envelope lumen // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0030877 // beta-catenin destruction complex // inferred from direct assay /// 0043005 // neuron projection // inferred from electronic annotation /// 0044297 // cell body // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction","chr1:174968299-174981163 (+) // 81.99 // q25.1"]
["11756227_s_at",243.24329,244.47809,227.11604,232.51782,237.57741,234.08113,0.04469633,0.052001476,-0.05427313,-0.0203619,0.010694027,-0.010694027,0.8410874,0.5869753,1.0146126,0.020928917,1.0146126,"up","PEX2",5828.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0001764 // neuron migration // inferred from electronic annotation /// 0006635 // fatty acid beta-oxidation // inferred from mutant phenotype /// 0006699 // bile acid biosynthetic process // inferred from electronic annotation /// 0007031 // peroxisome organization // inferred from mutant phenotype /// 0007031 // peroxisome organization // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0016558 // protein import into peroxisome matrix // inferred from mutant phenotype /// 0031648 // protein destabilization // inferred from mutant phenotype /// 0042632 // cholesterol homeostasis // inferred from electronic annotation /// 0045540 // regulation of cholesterol biosynthetic process // inferred from electronic annotation /// 0048147 // negative regulation of fibroblast proliferation // inferred from mutant phenotype /// 0050680 // negative regulation of epithelial cell proliferation // inferred from mutant phenotype","0005624 // membrane fraction // inferred from electronic annotation /// 0005777 // peroxisome // inferred from electronic annotation /// 0005778 // peroxisomal membrane // inferred from direct assay /// 0005778 // peroxisomal membrane // inferred from electronic annotation /// 0005779 // integral to peroxisomal membrane // inferred from mutant phenotype /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016593 // Cdc73/Paf1 complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:77895084-77896020 (-) // 95.08 // q21.11"]
["11750999_a_at",48.641922,47.776756,51.09612,46.474358,67.24479,51.559235,-0.035506725,-0.06139803,0.035506725,-0.101272106,0.4317155,0.048523903,0.7484818,0.41434377,-1.1071023,-0.14678851,1.1071023,"down","TBXAS1",6916.0,"0001516 // prostaglandin biosynthetic process // inferred from electronic annotation /// 0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0006690 // icosanoid metabolic process // traceable author statement /// 0006692 // prostanoid metabolic process // traceable author statement /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0030644 // cellular chloride ion homeostasis // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0045907 // positive regulation of vasoconstriction // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004497 // monooxygenase activity // inferred from electronic annotation /// 0004796 // thromboxane-A synthase activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from electronic annotation /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016705 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation /// 0020037 // heme binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:139529071-139716629 (+) // 99.94 // q34"]
["11755383_a_at",556.29895,544.38727,544.4499,556.57666,533.5338,555.82184,0.01614952,-0.015077591,-0.014911652,0.016869545,-0.04413128,0.014911652,0.9948442,0.9834849,-1.0003443,-4.966004E-4,1.0003443,"down","SEC24C",9632.0,"0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006888 // ER to Golgi vesicle-mediated transport // non-traceable author statement /// 0006888 // ER to Golgi vesicle-mediated transport // traceable author statement /// 0006888 // ER to Golgi vesicle-mediated transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016044 // cellular membrane organization // traceable author statement /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0048208 // COPII vesicle coating // traceable author statement","0000139 // Golgi membrane // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0012507 // ER to Golgi transport vesicle membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030127 // COPII vesicle coat // non-traceable author statement /// 0030127 // COPII vesicle coat // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation","chr10:75504135-75531917 (+) // 99.34 // q22.2"]
["11720205_a_at",97.94608,98.25853,84.611336,97.8978,98.950165,97.597145,3.5619736E-4,0.004951,-0.21078062,-3.5572052E-4,0.015070438,-0.0047926903,0.72115403,0.37157923,-1.0510261,-0.0717985,1.0510261,"down","CLDN12",9069.0,"0016338 // calcium-independent cell-cell adhesion // inferred from sequence or structural similarity /// 0034329 // cell junction assembly // traceable author statement /// 0045216 // cell-cell junction organization // traceable author statement /// 0070830 // tight junction assembly // traceable author statement","0005886 // plasma membrane // inferred from electronic annotation /// 0005923 // tight junction // inferred from sequence or structural similarity /// 0005923 // tight junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","0005198 // structural molecule activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from sequence or structural similarity","chr7:90032647-90045268 (+) // 97.33 // q21.13"]
["11751493_a_at",7.0788765,6.723035,6.170889,8.363525,7.286259,7.188746,-0.011109829,-0.085517645,-0.20915198,0.22948098,0.030548096,0.011109829,0.45993307,0.10099067,-1.1425886,-0.19230606,1.1425886,"down","PRKG1",5592.0,"0001764 // neuron migration // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016358 // dendrite development // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // traceable author statement /// 0030900 // forebrain development // inferred from electronic annotation /// 0043087 // regulation of GTPase activity // inferred from mutant phenotype /// 0090331 // negative regulation of platelet aggregation // inferred from mutant phenotype","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004692 // cGMP-dependent protein kinase activity // inferred from direct assay /// 0004692 // cGMP-dependent protein kinase activity // inferred from electronic annotation /// 0005246 // calcium channel regulator activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0030553 // cGMP binding // inferred from electronic annotation","chr10:52834328-53822616 (+) // 97.12 // q11.23"]
["11755599_x_at",54.596504,51.612755,54.456024,53.936127,50.555653,49.66185,0.04931879,-0.031762123,0.045601845,0.031762123,-0.061617374,-0.0873518,0.631534,0.25079808,1.0425538,0.06012181,1.0425538,"up","POU5F1",5460.0,"0001714 // endodermal cell fate specification // inferred from direct assay /// 0001824 // blastocyst development // inferred from sequence or structural similarity /// 0003130 // BMP signaling pathway involved in heart induction // inferred from mutant phenotype /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0006366 // transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0009611 // response to wounding // inferred from expression pattern /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0009786 // regulation of asymmetric cell division // inferred from sequence or structural similarity /// 0010468 // regulation of gene expression // inferred from mutant phenotype /// 0035019 // somatic stem cell maintenance // inferred from direct assay /// 0035019 // somatic stem cell maintenance // inferred from mutant phenotype /// 0035413 // positive regulation of catenin import into nucleus // inferred from direct assay /// 0042789 // mRNA transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0060391 // positive regulation of SMAD protein import into nucleus // inferred from direct assay /// 0060795 // cell fate commitment involved in formation of primary germ layer // inferred from mutant phenotype /// 0060913 // cardiac cell fate determination // inferred from direct assay /// 0060965 // negative regulation of gene silencing by miRNA // inferred from mutant phenotype /// 0090081 // regulation of heart induction by regulation of canonical Wnt receptor signaling pathway // inferred from mutant phenotype /// 0090308 // regulation of methylation-dependent chromatin silencing // inferred from direct assay","0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005667 // transcription factor complex // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay","0000981 // sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from sequence or structural similarity /// 0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0035198 // miRNA binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay","chr6:31132128-31134615 (-) // 87.02 // p21.33"]
["11734524_at",12.372387,13.918197,13.269615,13.2611885,15.089826,12.859747,-0.10054469,0.06930375,4.580021E-4,-4.582405E-4,0.1859076,-0.04480648,0.8210806,0.5436007,-1.0404027,-0.05714198,1.0404027,"down","C6orf15",29113.0,"0030198 // extracellular matrix organization // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005614 // interstitial matrix // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from electronic annotation","0001968 // fibronectin binding // inferred from electronic annotation /// 0005518 // collagen binding // inferred from electronic annotation /// 0005539 // glycosaminoglycan binding // inferred from electronic annotation /// 0005540 // hyaluronic acid binding // inferred from electronic annotation /// 0008201 // heparin binding // inferred from electronic annotation /// 0043236 // laminin binding // inferred from electronic annotation /// 0070052 // collagen V binding // inferred from electronic annotation","chr6:31078999-31080299 (-) // 89.22 // p21.33"]
["11721399_a_at",13.233805,13.900299,12.852638,13.7664995,16.176115,16.090313,-0.0639112,0.0069770813,-0.10607433,-0.0069770813,0.22572637,0.21805358,0.41464084,0.07397723,-1.1486483,-0.19993708,1.1486483,"down","SLIT2",9353.0,"0001656 // metanephros development // inferred from electronic annotation /// 0001657 // ureteric bud development // inferred from mutant phenotype /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001933 // negative regulation of protein phosphorylation // inferred from direct assay /// 0002042 // cell migration involved in sprouting angiogenesis // inferred from mutant phenotype /// 0002689 // negative regulation of leukocyte chemotaxis // inferred from direct assay /// 0006935 // chemotaxis // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007409 // axonogenesis // inferred from electronic annotation /// 0007411 // axon guidance // inferred from direct assay /// 0007411 // axon guidance // traceable author statement /// 0007411 // axon guidance // inferred from electronic annotation /// 0008045 // motor axon guidance // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0010593 // negative regulation of lamellipodium assembly // inferred from direct assay /// 0010596 // negative regulation of endothelial cell migration // inferred from direct assay /// 0010629 // negative regulation of gene expression // inferred from electronic annotation /// 0014912 // negative regulation of smooth muscle cell migration // inferred from direct assay /// 0016337 // cell-cell adhesion // inferred from electronic annotation /// 0021772 // olfactory bulb development // inferred from electronic annotation /// 0021834 // chemorepulsion involved in embryonic olfactory bulb interneuron precursor migration // inferred from direct assay /// 0021836 // chemorepulsion involved in postnatal olfactory bulb interneuron migration // inferred from direct assay /// 0021972 // corticospinal neuron axon guidance through spinal cord // inferred from mutant phenotype /// 0022029 // telencephalon cell migration // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030308 // negative regulation of cell growth // inferred from mutant phenotype /// 0030336 // negative regulation of cell migration // inferred from direct assay /// 0030336 // negative regulation of cell migration // inferred from mutant phenotype /// 0030837 // negative regulation of actin filament polymerization // inferred from direct assay /// 0031290 // retinal ganglion cell axon guidance // inferred from direct assay /// 0031290 // retinal ganglion cell axon guidance // inferred from electronic annotation /// 0032870 // cellular response to hormone stimulus // inferred from expression pattern /// 0033563 // dorsal/ventral axon guidance // inferred from electronic annotation /// 0035385 // Roundabout signaling pathway // inferred by curator /// 0035385 // Roundabout signaling pathway // inferred from mutant phenotype /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0043116 // negative regulation of vascular permeability // inferred from direct assay /// 0048754 // branching morphogenesis of a tube // inferred from direct assay /// 0048754 // branching morphogenesis of a tube // inferred from mutant phenotype /// 0048812 // neuron projection morphogenesis // inferred from electronic annotation /// 0048846 // axon extension involved in axon guidance // inferred from direct assay /// 0050772 // positive regulation of axonogenesis // traceable author statement /// 0050919 // negative chemotaxis // inferred from direct assay /// 0050919 // negative chemotaxis // inferred from mutant phenotype /// 0050919 // negative chemotaxis // inferred from electronic annotation /// 0050929 // induction of negative chemotaxis // inferred from direct assay /// 0051058 // negative regulation of small GTPase mediated signal transduction // inferred from direct assay /// 0051414 // response to cortisol stimulus // inferred from expression pattern /// 0060603 // mammary gland duct morphogenesis // inferred from electronic annotation /// 0060763 // mammary duct terminal end bud growth // inferred from electronic annotation /// 0061364 // apoptotic process involved in luteolysis // inferred from expression pattern /// 0070100 // negative regulation of chemokine-mediated signaling pathway // inferred from mutant phenotype /// 0071504 // cellular response to heparin // inferred from direct assay /// 0071672 // negative regulation of smooth muscle cell chemotaxis // inferred from direct assay /// 0071676 // negative regulation of mononuclear cell migration // inferred from direct assay /// 0090024 // negative regulation of neutrophil chemotaxis // inferred from direct assay /// 0090027 // negative regulation of monocyte chemotaxis // inferred from sequence or structural similarity /// 0090260 // negative regulation of retinal ganglion cell axon guidance // inferred from direct assay /// 0090288 // negative regulation of cellular response to growth factor stimulus // inferred from direct assay","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // non-traceable author statement","0005095 // GTPase inhibitor activity // inferred from direct assay /// 0005509 // calcium ion binding // non-traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008201 // heparin binding // inferred from direct assay /// 0008201 // heparin binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0043237 // laminin-1 binding // inferred from direct assay /// 0043394 // proteoglycan binding // inferred from physical interaction /// 0045499 // chemorepellent activity // inferred from electronic annotation /// 0048495 // Roundabout binding // inferred from physical interaction","chr4:20254882-20621341 (+) // 99.81 // p15.31"]
["11751024_a_at",46.575294,45.520435,58.893085,46.968876,50.463818,43.869106,-0.006070137,-0.039120674,0.33246326,0.006070137,0.10961437,-0.09242964,0.82013506,0.54229033,1.0629,0.088005796,1.0629,"up","XYLB",9942.0,"0005975 // carbohydrate metabolic process // traceable author statement /// 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0005998 // xylulose catabolic process // traceable author statement /// 0006091 // generation of precursor metabolites and energy // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0042732 // D-xylose metabolic process // inferred from electronic annotation","","0000166 // nucleotide binding // inferred from electronic annotation /// 0004856 // xylulokinase activity // inferred from electronic annotation /// 0004856 // xylulokinase activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016773 // phosphotransferase activity, alcohol group as acceptor // inferred from electronic annotation","chr3:38388345-38454767 (+) // 99.83 // p22.2"]
["11751219_x_at",277.51605,279.03568,271.24277,279.90506,317.8822,294.52954,-0.010122299,-0.0022439957,-0.04310894,0.0022439957,0.18579865,0.07571888,0.4970723,0.1240492,-1.0765477,-0.1064123,1.0765477,"down","GOLGA4",2803.0,"0000042 // protein targeting to Golgi // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // traceable author statement /// 0043001 // Golgi to plasma membrane protein transport // inferred from direct assay","0000139 // Golgi membrane // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005802 // trans-Golgi network // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0051020 // GTPase binding // inferred from physical interaction","chr3:37284737-37408236 (+) // 97.57 // p22.2"]
["11722242_at",235.16011,219.51248,251.18951,264.6373,272.7181,249.72942,-0.09092808,-0.190269,0.004205227,0.079444885,0.122838974,-0.0042057037,0.42304695,0.07854585,-1.1160152,-0.15835667,1.1160152,"down","TSPAN12",23554.0,"0001525 // angiogenesis // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from sequence or structural similarity /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0010842 // retina layer formation // inferred from sequence or structural similarity /// 0010842 // retina layer formation // inferred from electronic annotation /// 0045765 // regulation of angiogenesis // inferred from sequence or structural similarity /// 0045765 // regulation of angiogenesis // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from sequence or structural similarity /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0042813 // Wnt-activated receptor activity // inferred from sequence or structural similarity","chr7:120427373-120498411 (-) // 98.9 // q31.31"]
["11732671_s_at",234.34674,224.18184,243.72856,228.87402,241.83754,217.84131,0.017045498,-0.046929836,0.07367611,-0.017045498,0.062438488,-0.08832216,0.86182505,0.63154554,1.0202389,0.02890698,1.0202389,"up","CCDC107",203260.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr9:35658309-35661183 (+) // 97.14 // p13.3"]
["11749474_a_at",409.98413,400.0285,413.73224,411.85052,373.0833,404.87402,0.009047508,-0.026417732,0.022176743,0.0156002045,-0.12702274,-0.009047508,0.751586,0.41849625,1.029368,0.0417589,1.029368,"up","AACS",65985.0,"0001889 // liver development // inferred from electronic annotation /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0007584 // response to nutrient // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0010243 // response to organic nitrogen // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0014074 // response to purine-containing compound // inferred from electronic annotation /// 0032024 // positive regulation of insulin secretion // inferred from electronic annotation /// 0034201 // response to oleic acid // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042594 // response to starvation // inferred from electronic annotation /// 0045471 // response to ethanol // inferred from electronic annotation /// 0050872 // white fat cell differentiation // inferred from electronic annotation /// 0060612 // adipose tissue development // inferred from electronic annotation /// 0071333 // cellular response to glucose stimulus // inferred from electronic annotation /// 0071394 // cellular response to testosterone stimulus // inferred from electronic annotation /// 0071397 // cellular response to cholesterol // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0030729 // acetoacetate-CoA ligase activity // inferred from electronic annotation /// 0047760 // butyrate-CoA ligase activity // inferred from electronic annotation","chr12:125589683-125627861 (+) // 93.79 // q24.31"]
["11736760_a_at",67.87401,62.773823,59.040737,78.92733,67.94359,76.97593,-7.390976E-4,-0.11343527,-0.20188808,0.21692657,7.3957443E-4,0.1808095,0.37206215,0.054839533,-1.1795032,-0.23817933,1.1795032,"down","FKBP11",51303.0,"0000413 // protein peptidyl-prolyl isomerization // not recorded /// 0000413 // protein peptidyl-prolyl isomerization // inferred from electronic annotation /// 0006457 // protein folding // inferred from electronic annotation /// 0018208 // peptidyl-proline modification // not recorded","0016020 // membrane // not recorded /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003755 // peptidyl-prolyl cis-trans isomerase activity // not recorded /// 0003755 // peptidyl-prolyl cis-trans isomerase activity // inferred from electronic annotation /// 0005528 // FK506 binding // not recorded /// 0016853 // isomerase activity // inferred from electronic annotation","chr12:49316778-49320024 (-) // 76.77 // q13.12"]
["11748701_s_at",23.093412,21.390787,21.290655,20.240082,21.715466,25.498837,0.09962511,-0.010866642,-0.017635822,-0.09064102,0.010866642,0.24257517,0.9282529,0.78682095,-1.0214081,-0.030559378,1.0214081,"down","FUT6",2528.0,"0006486 // protein glycosylation // inferred from electronic annotation /// 0006486 // protein glycosylation // traceable author statement /// 0036065 // fucosylation // traceable author statement /// 0036065 // fucosylation // inferred from electronic annotation /// 0042355 // L-fucose catabolic process // non-traceable author statement","0005794 // Golgi apparatus // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation","0008417 // fucosyltransferase activity // traceable author statement /// 0008417 // fucosyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0017060 // 3-galactosyl-N-acetylglucosaminide 4-alpha-L-fucosyltransferase activity // inferred from electronic annotation /// 0046920 // alpha-(1->3)-fucosyltransferase activity // traceable author statement","chr19:5831388-5832578 (-) // 99.73 // p13.3"]
["11753664_x_at",15.779155,15.577085,13.993894,17.782316,14.456412,16.006628,0.0092971325,-0.0092971325,-0.16392517,0.18172073,-0.11701298,0.029946804,0.7677589,0.44664228,-1.0615654,-0.08619325,1.0615654,"down","RDM1",201299.0,"0006281 // DNA repair // inferred from electronic annotation /// 0006310 // DNA recombination // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0015030 // Cajal body // inferred from electronic annotation /// 0016605 // PML body // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation","chr17:34245345-34257731 (-) // 100.0 // q12"]
["11745303_at",10.996387,12.657287,11.968208,11.5767145,11.178436,10.964406,-0.048942566,0.15399599,0.073235035,0.025253773,-0.025253534,-0.053144455,0.6630609,0.28986982,1.0549278,0.077144295,1.0549278,"up","PFN1P2",767846.0,"0007010 // cytoskeleton organization // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation","0015629 // actin cytoskeleton // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation","chr1:148349176-148350899 (+) // 38.06 // q21.2"]
["11749667_a_at",10.561086,11.190872,10.441519,10.7881775,11.925155,10.265133,-0.015346527,0.068217754,-0.03177309,0.015346527,0.15990329,-0.056352377,0.87863034,0.66882277,-1.0228536,-0.032599688,1.0228536,"down","AFAP1L2",84632.0,"0006954 // inflammatory response // inferred from direct assay /// 0007346 // regulation of mitotic cell cycle // inferred from direct assay /// 0032675 // regulation of interleukin-6 production // inferred from direct assay /// 0032757 // positive regulation of interleukin-8 production // inferred from direct assay /// 0045742 // positive regulation of epidermal growth factor receptor signaling pathway // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0061098 // positive regulation of protein tyrosine kinase activity // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0016235 // aggresome // inferred from direct assay","0005543 // phospholipid binding // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from physical interaction /// 0030296 // protein tyrosine kinase activator activity // inferred from direct assay /// 0042169 // SH2 domain binding // inferred from physical interaction","chr10:116055530-116164260 (-) // 99.8 // q25.3"]
["11744554_at",55.871197,55.31482,56.037384,55.940914,48.52547,55.033913,0.0072193146,-0.0072193146,0.011504173,0.009017944,-0.19614315,-0.014564991,0.69732994,0.3360934,1.0504917,0.07106475,1.0504917,"up","CROT",54677.0,"0006091 // generation of precursor metabolites and energy // inferred from direct assay /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from mutant phenotype /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006635 // fatty acid beta-oxidation // inferred from direct assay /// 0006635 // fatty acid beta-oxidation // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0010243 // response to organic nitrogen // inferred from electronic annotation /// 0015908 // fatty acid transport // inferred from electronic annotation /// 0033540 // fatty acid beta-oxidation using acyl-CoA oxidase // traceable author statement /// 0042493 // response to drug // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051791 // medium-chain fatty acid metabolic process // inferred from direct assay","0005625 // soluble fraction // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005777 // peroxisome // inferred from direct assay /// 0005777 // peroxisome // non-traceable author statement /// 0005777 // peroxisome // inferred from electronic annotation /// 0005782 // peroxisomal matrix // traceable author statement /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0005102 // receptor binding // inferred from physical interaction /// 0008458 // carnitine O-octanoyltransferase activity // inferred from direct assay /// 0008458 // carnitine O-octanoyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation","chr7:86974969-86989370 (+) // 82.66 // q21.12"]
["11738003_s_at",79.04066,68.057724,74.85417,73.5891,87.73459,79.68296,0.039256096,-0.17657948,-0.039256096,-0.06384611,0.18980694,0.05093193,0.6632808,0.29011348,-1.0850971,-0.117824115,1.0850971,"down","SLC35E2 /// SLC35E2B","728661 /// 9906","","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr1:1660748-1677493 (-) // 92.67 // p36.33"]
["11723847_a_at",101.53803,95.5347,102.18879,104.09115,98.12225,97.98351,0.024683952,-0.0632391,0.033900738,0.060511112,-0.024683952,-0.026725292,0.97461116,0.91879225,-1.0031835,-0.0045855017,1.0031835,"down","ATP11C",286410.0,"0006812 // cation transport // inferred from electronic annotation /// 0015914 // phospholipid transport // inferred from electronic annotation /// 0034220 // ion transmembrane transport // traceable author statement /// 0045332 // phospholipid translocation // non-traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0004012 // phospholipid-translocating ATPase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0015662 // ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016820 // hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chrX:138808504-138914447 (-) // 98.96 // q27.1"]
["11722682_at",105.34353,109.30892,124.22005,107.77115,105.06799,104.43545,-0.01643467,0.036875248,0.22136164,0.01643467,-0.02021265,-0.028924465,0.6550999,0.28039482,1.0654786,0.091501564,1.0654786,"up","MECP2",4204.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay","0000792 // heterochromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003714 // transcription corepressor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0010385 // double-stranded methylated DNA binding // inferred from mutant phenotype /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0047485 // protein N-terminus binding // inferred from physical interaction","chrX:153287024-153363205 (-) // 98.23 // q28"]
["11741782_s_at",7.1558127,8.341573,7.686792,6.0859966,7.420309,7.758307,-0.07781482,0.14338899,0.025451183,-0.3114369,-0.025451183,0.038811445,0.7129151,0.35870188,1.0940666,0.12970059,1.0940666,"up","TSPY1 /// TSPY10 /// TSPY2 /// TSPY3 /// TSPY4 /// TSPY8","100289087 /// 64591 /// 7258 /// 728137 /// 728395 /// 728403","0006334 // nucleosome assembly // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0007283 // spermatogenesis // traceable author statement /// 0007506 // gonadal mesoderm development // inferred from electronic annotation /// 0007548 // sex differentiation // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chrY:6114263-6117053 (+) // 100.0 // p11.2 /// chrY:9215684-9218479 (+) // 99.57 // p11.2 /// chrY:9236029-9238825 (+) // 99.48 // p11.2 /// chrY:9304563-9307357 (+) // 99.48 // p11.2 /// chrY:9365488-9368284 (+) // 99.48 // p11.2 /// chrY:9175072-9177886 (+) // 97.24 // p11.2 /// chrY:9195405-9198201 (+) // 99.4 // p11.2 /// chrY:9324875-9327689 (+) // 97.16 // p11.2 /// chrY:9345158-9347971 (+) // 96.98 // p11.2"]
["11737806_a_at",15.683982,15.101758,17.158852,15.3474,16.082615,17.563246,-0.01810503,-0.07268047,0.11155605,-0.049402714,0.01810503,0.14516258,0.8984016,0.7144421,-1.0217423,-0.031031433,1.0217423,"down","PIWIL2",55124.0,"0000966 // RNA 5'-end processing // inferred from sequence or structural similarity /// 0000966 // RNA 5'-end processing // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0007126 // meiosis // inferred from electronic annotation /// 0007128 // meiotic prophase I // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030718 // germ-line stem cell maintenance // inferred from sequence or structural similarity /// 0030718 // germ-line stem cell maintenance // inferred from electronic annotation /// 0031047 // gene silencing by RNA // inferred from sequence or structural similarity /// 0031047 // gene silencing by RNA // inferred from electronic annotation /// 0034587 // piRNA metabolic process // inferred from sequence or structural similarity /// 0034587 // piRNA metabolic process // inferred from electronic annotation /// 0043046 // DNA methylation involved in gamete generation // inferred from sequence or structural similarity /// 0043046 // DNA methylation involved in gamete generation // inferred from electronic annotation /// 0045727 // positive regulation of translation // inferred from sequence or structural similarity /// 0045727 // positive regulation of translation // inferred from electronic annotation /// 0048477 // oogenesis // inferred from sequence or structural similarity /// 0048477 // oogenesis // inferred from electronic annotation","0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005844 // polysome // inferred from electronic annotation /// 0033391 // chromatoid body // inferred from sequence or structural similarity /// 0033391 // chromatoid body // inferred from electronic annotation /// 0043186 // P granule // inferred from sequence or structural similarity /// 0043186 // P granule // inferred from electronic annotation /// 0071546 // pi-body // inferred from sequence or structural similarity /// 0071546 // pi-body // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003729 // mRNA binding // inferred from electronic annotation /// 0034584 // piRNA binding // inferred from direct assay /// 0034584 // piRNA binding // inferred from sequence or structural similarity /// 0034584 // piRNA binding // inferred from electronic annotation","chr8:22132809-22213584 (+) // 91.89 // p21.3"]
["11751067_x_at",536.1611,566.19604,608.2087,514.87506,552.1693,537.85004,-0.023490906,0.05514431,0.15840912,-0.08193493,0.018953323,-0.018953323,0.592943,0.20731099,1.0648615,0.09066585,1.0648615,"up","AKIRIN1",79647.0,"","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","","chr1:39456959-39470995 (+) // 87.1 // p34.3"]
["11750179_s_at",94.77564,88.44363,79.02117,91.266556,92.91054,98.92708,0.04155159,-0.05820656,-0.22072506,-0.012877941,0.012877941,0.10340071,0.63037467,0.24848996,-1.0819198,-0.11359354,1.0819198,"down","ECHDC2",55268.0,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation","chr1:53362074-53392851 (-) // 86.17 // p32.3"]
["11750093_a_at",2119.1606,2101.5945,2129.7185,2193.8757,2224.6738,2060.5828,-0.0035848618,-0.015593529,0.0035848618,0.046403885,0.06651592,-0.04402542,0.7763149,0.45956522,-1.0197127,-0.028162716,1.0197127,"down","PRICKLE4 /// TOMM6","100188893 /// 29964","0006626 // protein targeting to mitochondrion // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement","0005634 // nucleus // non-traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:41755449-41757379 (+) // 71.7 // p21.1"]
["11751150_a_at",118.928795,119.597496,123.65455,122.52631,118.584404,120.65871,-0.014461517,-0.006372452,0.041756153,0.028532028,-0.018645763,0.006372452,0.9847724,0.9475777,1.0010781,0.0015545732,1.0010781,"up","SNIP1",79753.0,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007249 // I-kappaB kinase/NF-kappaB cascade // inferred from electronic annotation /// 0031047 // gene silencing by RNA // inferred from electronic annotation /// 0035196 // production of miRNAs involved in gene silencing by miRNA // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr1:38002927-38019890 (-) // 99.61 // p34.3"]
["11735075_at",35.597916,34.609673,30.986103,34.124786,34.82411,35.78888,0.0361619,-0.0044555664,-0.16400957,-0.024810791,0.0044555664,0.043880463,0.7791657,0.46417105,-1.0366601,-0.051942907,1.0366601,"down","C15orf37",283687.0,"","","","chr15:80215112-80217268 (+) // 84.74 // q25.1"]
["11757504_a_at",176.37398,168.84004,187.82162,170.3713,172.00478,180.04726,0.018094063,-0.044887066,0.108819485,-0.031861782,-0.01809454,0.047831535,0.8524143,0.61118513,1.0196333,0.028050385,1.0196333,"up","DDAH1",23576.0,"0000052 // citrulline metabolic process // inferred from direct assay /// 0003073 // regulation of systemic arterial blood pressure // inferred from sequence or structural similarity /// 0003073 // regulation of systemic arterial blood pressure // inferred from electronic annotation /// 0006525 // arginine metabolic process // inferred from electronic annotation /// 0006527 // arginine catabolic process // traceable author statement /// 0007263 // nitric oxide mediated signal transduction // traceable author statement /// 0045429 // positive regulation of nitric oxide biosynthetic process // inferred from sequence or structural similarity /// 0045429 // positive regulation of nitric oxide biosynthetic process // inferred from electronic annotation /// 0045766 // positive regulation of angiogenesis // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation","0003824 // catalytic activity // traceable author statement /// 0016403 // dimethylargininase activity // inferred from direct assay /// 0016403 // dimethylargininase activity // inferred from electronic annotation /// 0016597 // amino acid binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016813 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:85784167-85784590 (-) // 92.34 // p22.3"]
["11723843_a_at",6.3347707,6.187221,5.9522243,5.6366735,6.229603,6.9683633,0.029076576,-0.0049242973,-0.060786963,-0.13937187,0.0049242973,0.16660404,0.9387835,0.8157913,-1.0160211,-0.02293041,1.0160211,"down","ADGB",79747.0,"0006508 // proteolysis // inferred from electronic annotation /// 0015671 // oxygen transport // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0004198 // calcium-dependent cysteine-type endopeptidase activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from electronic annotation /// 0019825 // oxygen binding // inferred from electronic annotation /// 0020037 // heme binding // inferred from electronic annotation","chr6:146920102-147136598 (+) // 97.4 // q24.3"]
["11746990_x_at",40.049248,41.545444,41.188156,41.188156,40.939392,41.5835,-0.040454388,0.012460709,0.0,0.0,-0.008739948,0.013781548,0.8284049,0.55827814,-1.0076619,-0.0110117085,1.0076619,"down","PEX14",5195.0,"0006461 // protein complex assembly // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0007031 // peroxisome organization // inferred from genetic interaction /// 0007031 // peroxisome organization // inferred from sequence or structural similarity /// 0007031 // peroxisome organization // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016558 // protein import into peroxisome matrix // inferred from mutant phenotype /// 0016558 // protein import into peroxisome matrix // inferred from electronic annotation /// 0016558 // protein import into peroxisome matrix // inferred from direct assay /// 0016561 // protein import into peroxisome matrix, translocation // inferred from direct assay /// 0032091 // negative regulation of protein binding // inferred from direct assay /// 0034453 // microtubule anchoring // inferred from direct assay /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0051260 // protein homooligomerization // inferred from direct assay /// 0072384 // organelle transport along microtubule // inferred from direct assay","0005622 // intracellular // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005777 // peroxisome // inferred from direct assay /// 0005777 // peroxisome // inferred from electronic annotation /// 0005778 // peroxisomal membrane // inferred from direct assay /// 0005778 // peroxisomal membrane // inferred from sequence or structural similarity /// 0005778 // peroxisomal membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from sequence or structural similarity /// 0016021 // integral to membrane // inferred from electronic annotation /// 0043234 // protein complex // inferred from sequence or structural similarity /// 0043234 // protein complex // inferred from electronic annotation","0003714 // transcription corepressor activity // inferred from direct assay /// 0003714 // transcription corepressor activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // inferred from direct assay /// 0047485 // protein N-terminus binding // inferred from physical interaction /// 0048487 // beta-tubulin binding // inferred from physical interaction","chr1:10535007-10690756 (+) // 89.94 // p36.22"]
["11749737_a_at",5.6688685,5.268951,5.298053,5.1114535,5.014543,5.66016,0.1015718,-0.0039732456,0.0039732456,-0.04775548,-0.07537079,0.09935379,0.8239694,0.5493093,1.0293841,0.041781455,1.0293841,"up","CPEB1",64506.0,"0006397 // mRNA processing // inferred from electronic annotation /// 0006412 // translation // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation","0000932 // cytoplasmic mRNA processing body // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005840 // ribosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // inferred from electronic annotation","chr15:83213044-83241961 (-) // 99.95 // q25.2"]
["11719063_a_at",130.71213,132.11264,117.275116,139.3242,138.31818,147.92989,-0.048487186,-0.033111572,-0.20498323,0.043566227,0.033111095,0.1300335,0.38316435,0.059196845,-1.120724,-0.16443098,1.120724,"down","SESN1",27244.0,"0006974 // response to DNA damage stimulus // traceable author statement /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0007050 // cell cycle arrest // traceable author statement /// 0008285 // negative regulation of cell proliferation // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement","","chr6:109307644-109416093 (-) // 98.19 // q21"]
["11715833_a_at",892.1401,912.145,976.2885,900.042,880.5685,853.2304,-0.0063610077,0.025631905,0.1236763,0.0063610077,-0.025196075,-0.07069588,0.54421914,0.16060497,1.0551826,0.07749265,1.0551826,"up","RUVBL1",8607.0,"0006281 // DNA repair // inferred from electronic annotation /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006334 // nucleosome assembly // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0007283 // spermatogenesis // traceable author statement /// 0016568 // chromatin modification // inferred from electronic annotation /// 0032508 // DNA duplex unwinding // inferred from direct assay /// 0032508 // DNA duplex unwinding // inferred from electronic annotation /// 0034080 // CenH3-containing nucleosome assembly at centromere // traceable author statement /// 0040008 // regulation of growth // inferred from electronic annotation /// 0043967 // histone H4 acetylation // inferred from direct assay /// 0043968 // histone H2A acetylation // inferred from direct assay /// 0051301 // cell division // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016363 // nuclear matrix // inferred from electronic annotation /// 0031011 // Ino80 complex // inferred from direct assay /// 0035267 // NuA4 histone acetyltransferase complex // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0071339 // MLL1 complex // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003678 // DNA helicase activity // inferred from direct assay /// 0003678 // DNA helicase activity // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from direct assay /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation","chr3:127799651-127842723 (-) // 86.95 // q21.3"]
["11745617_x_at",74.138626,71.383575,79.8514,77.207344,73.37402,77.79982,-0.029256344,-0.083889484,0.07783604,0.029256344,-0.04421234,0.040285587,0.90422934,0.72906023,-1.0141093,-0.020213088,1.0141093,"down","TRIM15",89870.0,"0007500 // mesodermal cell fate determination // traceable author statement","0005622 // intracellular // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:30131461-30140462 (+) // 99.77 // p22.1"]
["11720583_s_at",86.04066,77.08327,91.20733,90.53333,73.69881,78.54068,0.06578922,-0.09281206,0.14991999,0.13921928,-0.157588,-0.06578922,0.834928,0.57423395,1.0490026,0.06901832,1.0490026,"up","TCF12",6938.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006955 // immune response // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007517 // muscle organ development // traceable author statement /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0070888 // E-box binding // inferred from electronic annotation","chr15:57210832-57580716 (+) // 99.35 // q21.3"]
["11744174_a_at",294.50073,297.60297,309.70682,275.87393,262.7608,288.85736,0.013957024,0.029074669,0.08658886,-0.0803051,-0.1505642,-0.013957024,0.36267272,0.050848637,1.0903684,0.12481564,1.0903684,"up","UBQLN4",56893.0,"0032434 // regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from sequence or structural similarity /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // inferred from electronic annotation /// 0031595 // nuclear proteasome complex // inferred from direct assay /// 0031597 // cytosolic proteasome complex // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0031593 // polyubiquitin binding // inferred from direct assay","chr1:156005091-156023576 (-) // 95.57 // q22 /// chr3:148701961-148705537 (-) // 94.39 // q24"]
["11737501_at",6.2609544,6.7267447,5.712499,6.0848813,7.3719206,5.435881,0.020576715,0.12410259,-0.111683846,-0.020576715,0.25623465,-0.18329191,0.9898109,0.96668833,-1.0044856,-0.0064568925,1.0044856,"down","TRPC5",7224.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006816 // calcium ion transport // traceable author statement /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0070588 // calcium ion transmembrane transport // inferred from direct assay /// 0070588 // calcium ion transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0034704 // calcium channel complex // inferred from direct assay","0004872 // receptor activity // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005262 // calcium channel activity // inferred from direct assay /// 0005262 // calcium channel activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0015279 // store-operated calcium channel activity // traceable author statement /// 0070679 // inositol 1,4,5 trisphosphate binding // inferred from electronic annotation","chrX:111017541-111326004 (-) // 97.95 // q23"]
["11724494_x_at",289.20737,281.67206,274.50778,273.66238,303.23837,290.00128,0.019043922,-0.019043922,-0.05621338,-0.060663223,0.08739185,0.02299881,0.79968286,0.50315875,-1.0247796,-0.035313603,1.0247796,"down","SF3B4",10262.0,"0000375 // RNA splicing, via transesterification reactions // traceable author statement /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0006397 // mRNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from direct assay /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005681 // spliceosomal complex // traceable author statement /// 0005689 // U12-type spliceosomal complex // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr1:149895209-149900522 (-) // 98.88 // q21.2"]
["11746787_a_at",20.095747,19.613247,21.706451,14.784414,18.079643,21.775312,0.017530918,-0.017530918,0.12876463,-0.42528224,-0.13499308,0.13333416,0.6931922,0.33009952,1.1370023,0.18523523,1.1370023,"up","USP37",57695.0,"0000082 // G1/S transition of mitotic cell cycle // inferred from direct assay /// 0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0035871 // protein K11-linked deubiquitination // inferred from direct assay /// 0051301 // cell division // inferred from electronic annotation /// 0071108 // protein K48-linked deubiquitination // inferred from direct assay","0005634 // nucleus // inferred from direct assay","0004197 // cysteine-type endopeptidase activity // inferred from direct assay /// 0004221 // ubiquitin thiolesterase activity // inferred from electronic annotation /// 0004843 // ubiquitin-specific protease activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction","chr2:219392994-219433053 (-) // 73.52 // q35"]
["11762309_a_at",14.229979,12.407877,16.16658,15.262258,17.916342,15.075996,-0.09217739,-0.28985453,0.09190369,0.008857727,0.24016523,-0.008857727,0.64241743,0.2645036,-1.1303461,-0.17676452,1.1303461,"down","ZNF589",51385.0,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:48282595-48328120 (+) // 96.07 // p21.31"]
["11745742_s_at",43.668285,41.937313,42.870636,45.607857,45.607857,49.780914,-0.03134823,-0.089699745,-0.057944298,0.03134823,0.03134823,0.15765858,0.3398656,0.042605132,-1.0966595,-0.13311571,1.0966595,"down","FGD3",89846.0,"0006915 // apoptotic process // traceable author statement /// 0007010 // cytoskeleton organization // inferred from sequence or structural similarity /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0008360 // regulation of cell shape // inferred from sequence or structural similarity /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0030036 // actin cytoskeleton organization // inferred from sequence or structural similarity /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0043088 // regulation of Cdc42 GTPase activity // inferred from sequence or structural similarity /// 0046847 // filopodium assembly // inferred from sequence or structural similarity /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0001726 // ruffle // inferred from sequence or structural similarity /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from sequence or structural similarity /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from sequence or structural similarity","0005085 // guanyl-nucleotide exchange factor activity // inferred from sequence or structural similarity /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0031267 // small GTPase binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:95726242-95798307 (+) // 95.84 // q22.31"]
["11740707_a_at",624.20715,633.06323,641.37384,595.6086,668.557,563.63654,-0.0101623535,0.0101623535,0.028978348,-0.077822685,0.08886337,-0.15742207,0.78313076,0.4706236,1.0413487,0.058453236,1.0413487,"up","PPP6C",5537.0,"0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0006470 // protein dephosphorylation // inferred from direct assay /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0006470 // protein dephosphorylation // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004722 // protein serine/threonine phosphatase activity // inferred from direct assay /// 0004722 // protein serine/threonine phosphatase activity // inferred from electronic annotation /// 0004722 // protein serine/threonine phosphatase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:127908852-127952218 (-) // 96.37 // q33.3"]
["11755838_a_at",51.277836,49.959953,49.43322,56.223106,54.360443,51.329453,-7.2574615E-4,-0.03828907,-0.053580284,0.13210201,0.083496094,7.2574615E-4,0.40264347,0.06785818,-1.0739844,-0.102973014,1.0739844,"down","PCDHB13",56123.0,"0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007416 // synapse assembly // traceable author statement /// 0016339 // calcium-dependent cell-cell adhesion // non-traceable author statement","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr5:140593508-140596591 (+) // 99.83 // q31.3"]
["11748745_a_at",152.8542,148.35371,153.67068,154.39417,152.20282,155.93053,-0.0038423538,-0.04695797,0.0038428307,0.0106191635,-0.010003567,0.024903774,0.6449493,0.26764786,-1.0168867,-0.02415896,1.0168867,"down","SF1",7536.0,"0000245 // spliceosomal complex assembly // non-traceable author statement /// 0000389 // nuclear mRNA 3'-splice site recognition // traceable author statement /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0022402 // cell cycle process // inferred from electronic annotation /// 0030238 // male sex determination // inferred from electronic annotation /// 0033327 // Leydig cell differentiation // inferred from electronic annotation /// 0048662 // negative regulation of smooth muscle cell proliferation // inferred from electronic annotation /// 0050810 // regulation of steroid biosynthetic process // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005681 // spliceosomal complex // inferred from direct assay /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005840 // ribosome // non-traceable author statement","0003676 // nucleic acid binding // non-traceable author statement /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003714 // transcription corepressor activity // traceable author statement /// 0003723 // RNA binding // traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:64533123-64545233 (-) // 98.75 // q13.1"]
["11716951_at",782.5285,814.4065,831.3566,794.14197,755.98206,779.1193,-0.010626793,0.04697895,0.07669735,0.010626793,-0.06041813,-0.016925812,0.5224058,0.14297812,1.0424095,0.059922192,1.0424095,"up","NANS",54187.0,"0009103 // lipopolysaccharide biosynthetic process // non-traceable author statement /// 0016051 // carbohydrate biosynthetic process // inferred from electronic annotation","0005737 // cytoplasm // non-traceable author statement /// 0005829 // cytosol // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0008781 // N-acylneuraminate cytidylyltransferase activity // non-traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0047444 // N-acylneuraminate-9-phosphate synthase activity // inferred from electronic annotation /// 0050462 // N-acetylneuraminate synthase activity // inferred from electronic annotation","chr9:100818680-100845359 (+) // 80.57 // q22.33"]
["11751009_s_at",503.7341,522.7149,563.86163,562.37415,560.2388,542.026,-0.12953949,-0.0761776,0.03313923,0.029328346,0.02383995,-0.02383995,0.635297,0.255585,-1.0477555,-0.06730206,1.0477555,"down","IK",3550.0,"0006955 // immune response // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement","0005615 // extracellular space // traceable author statement /// 0005625 // soluble fraction // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","","chr5:140027425-140042063 (+) // 92.11 // q31.3"]
["11726504_at",283.44424,286.74182,303.4132,313.54053,296.03998,309.56454,-0.080472946,-0.06378555,0.017745972,0.06511402,-0.017745972,0.046702385,0.5111268,0.13536847,-1.0522866,-0.07352772,1.0522866,"down","PGBD3",267004.0,"","","","chr10:50723150-50741024 (-) // 93.44 // q11.23"]
["11723563_at",1981.6704,2022.1178,2077.3997,1888.2979,1968.2705,1898.9741,0.0048942566,0.034044266,0.072956085,-0.064736366,-0.0048942566,-0.056602478,0.342371,0.04332055,1.0565609,0.07937589,1.0565609,"up","VWA5A",4013.0,"","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay","","chr11:123986110-123995543 (+) // 82.14 // q24.2"]
["11733230_a_at",8.708996,7.8302493,7.311177,7.673962,7.495376,6.913251,0.19952035,0.046072245,-0.052882433,0.016985416,-0.016985178,-0.1336217,0.65184444,0.27667427,1.078314,0.10877727,1.078314,"up","PTPRB",5787.0,"0001525 // angiogenesis // inferred from electronic annotation /// 0006470 // protein dephosphorylation // traceable author statement /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0006796 // phosphate-containing compound metabolic process // traceable author statement /// 0016311 // dephosphorylation // inferred from direct assay /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation","0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0005001 // transmembrane receptor protein tyrosine phosphatase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation","chr12:70910629-71031220 (-) // 96.36 // q15"]
["11742030_s_at",99.5163,99.040695,96.87401,91.74836,95.26702,101.03354,0.022867203,0.015955925,-0.015955448,-0.09438324,-0.04008913,0.044697285,0.75545096,0.4238631,1.0263677,0.037547622,1.0263677,"up","ZMIZ2",83637.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0043596 // nuclear replication fork // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0030374 // ligand-dependent nuclear receptor transcription coactivator activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:44795786-44809477 (+) // 96.73 // p13"]
["11719960_a_at",816.294,859.8112,846.0963,831.7986,819.52234,827.67395,-0.02355957,0.051371574,0.028173447,0.0035858154,-0.017865181,-0.0035858154,0.7040139,0.34527734,1.0172095,0.024616882,1.0172095,"up","CTBP1",1487.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0019079 // viral genome replication // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0031065 // positive regulation of histone deacetylation // inferred from mutant phenotype /// 0034401 // regulation of transcription by chromatin organization // inferred from mutant phenotype /// 0035067 // negative regulation of histone acetylation // inferred from mutant phenotype /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0050872 // white fat cell differentiation // inferred from sequence or structural similarity /// 0050872 // white fat cell differentiation // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from mutant phenotype /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0090241 // negative regulation of histone H4 acetylation // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0017053 // transcriptional repressor complex // inferred from direct assay /// 0017053 // transcriptional repressor complex // inferred from sequence or structural similarity /// 0017053 // transcriptional repressor complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0001106 // RNA polymerase II transcription corepressor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // traceable author statement /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016616 // oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0048037 // cofactor binding // inferred from electronic annotation /// 0051287 // NAD binding // inferred from sequence or structural similarity /// 0051287 // NAD binding // inferred from electronic annotation","chr4:1205232-1242909 (-) // 88.65 // p16.3"]
["11734901_a_at",20.874239,20.897835,19.653831,19.366901,20.888554,20.093462,0.027498722,0.029128551,-0.059414387,-0.08063173,0.028487682,-0.027498722,0.8389993,0.5832824,1.0179161,0.025618631,1.0179161,"up","CYP4V2",285440.0,"0007601 // visual perception // inferred from electronic annotation /// 0010430 // fatty acid omega-oxidation // inferred from direct assay /// 0050896 // response to stimulus // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004497 // monooxygenase activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from electronic annotation /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016705 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen // inferred from electronic annotation /// 0020037 // heme binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr4:187112470-187134612 (+) // 83.43 // q35.2"]
["11760518_at",18.148746,14.238237,14.136824,13.372032,15.672103,13.83156,0.3552556,0.005156517,-0.0051562786,-0.085395575,0.14358449,-0.03665042,0.77883685,0.4636083,1.0801556,0.111239165,1.0801556,"up","SEC11C",90701.0,"0006112 // energy reserve metabolic process // traceable author statement /// 0006412 // translation // traceable author statement /// 0006465 // signal peptide processing // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0050796 // regulation of insulin secretion // traceable author statement","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr18:56807097-56824178 (+) // 77.11 // q21.32"]
["11723730_at",86.87401,90.938286,86.54068,88.068436,95.930305,95.04067,-0.042831898,0.02313137,-0.04837799,-0.02313137,0.10023022,0.086788654,0.5467725,0.16320626,-1.0550578,-0.077321984,1.0550578,"down","KREMEN1",83999.0,"0007154 // cell communication // traceable author statement /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0060828 // regulation of canonical Wnt receptor signaling pathway // non-traceable author statement","0005624 // membrane fraction // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr22:29469065-29542807 (+) // 88.98 // q12.1"]
["11756940_a_at",132.18755,130.6605,126.49415,130.6605,128.56042,136.08458,0.016762733,0.0,-0.046752453,0.0,-0.023376465,0.058680534,0.8090145,0.5204879,-1.0152005,-0.021764679,1.0152005,"down","ZSCAN21",7589.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016032 // viral reproduction // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // non-traceable author statement /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:99647421-99662660 (+) // 95.85 // q22.1"]
["11727349_at",38.318554,34.23686,33.464596,41.387775,44.43295,39.326283,-0.018725395,-0.18121815,-0.21413279,0.09243631,0.19486141,0.018725395,0.3288901,0.038606144,-1.1810198,-0.24003313,1.1810198,"down","TBC1D21",161514.0,"0032313 // regulation of Rab GTPase activity // inferred from electronic annotation /// 0032851 // positive regulation of Rab GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005097 // Rab GTPase activator activity // inferred from electronic annotation","chr15:74165950-74181553 (+) // 95.92 // q24.1"]
["11721525_s_at",104.873184,109.40434,119.81989,109.088005,91.104744,102.50576,-0.02842331,0.03260088,0.16379833,0.02842331,-0.23147058,-0.061364174,0.5905844,0.20380473,1.1050633,0.14412904,1.1050633,"up","BOLA2 /// BOLA2B /// LOC440354","440354 /// 552900 /// 654483","0016310 // phosphorylation // inferred from electronic annotation","","0016301 // kinase activity // inferred from electronic annotation","chr16:30204252-30205682 (-) // 87.78 // p11.2 /// chr16:29464910-29466340 (-) // 87.78 // p11.2"]
["11732394_at",42.69219,40.548485,37.577053,44.75637,34.97315,39.895336,0.08603811,0.011713982,-0.098082066,0.15415907,-0.20168638,-0.011713982,0.9590656,0.8736596,1.0137044,0.019637045,1.0137044,"up","CLDN22 /// WWC2","53842 /// 80014","0016338 // calcium-independent cell-cell adhesion // inferred from sequence or structural similarity /// 0034329 // cell junction assembly // traceable author statement /// 0045216 // cell-cell junction organization // traceable author statement /// 0070830 // tight junction assembly // traceable author statement","0005886 // plasma membrane // inferred from electronic annotation /// 0005923 // tight junction // inferred from sequence or structural similarity /// 0005923 // tight junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","0005198 // structural molecule activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from sequence or structural similarity","chr4:184020445-184241927 (+) // 98.19 // q35.1"]
["11732252_x_at",91.88109,90.817,97.147514,98.627014,98.84873,94.97439,-0.064089775,-0.0808959,0.016319275,0.03812504,0.04136467,-0.016318798,0.52444154,0.14477856,-1.0453207,-0.06394569,1.0453207,"down","RCOR3",55758.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr1:211432622-211489723 (+) // 97.13 // q32.2"]
["11717049_s_at",121.04709,120.67279,117.87399,126.01972,136.94608,116.707275,0.002233982,-0.002233982,-0.036088943,0.06031561,0.18027353,-0.050439835,0.69170904,0.32778284,-1.0536624,-0.07541272,1.0536624,"down","DES /// FAM48A","1674 /// 55578","0006914 // autophagy // inferred from electronic annotation /// 0006936 // muscle contraction // traceable author statement /// 0007010 // cytoskeleton organization // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007369 // gastrulation // inferred from electronic annotation /// 0008016 // regulation of heart contraction // traceable author statement /// 0030049 // muscle filament sliding // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005626 // insoluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005882 // intermediate filament // traceable author statement /// 0005882 // intermediate filament // inferred from electronic annotation /// 0005916 // fascia adherens // inferred from electronic annotation /// 0030018 // Z disc // inferred from direct assay /// 0030018 // Z disc // inferred from electronic annotation /// 0031594 // neuromuscular junction // inferred from electronic annotation /// 0042383 // sarcolemma // inferred from electronic annotation /// 0043292 // contractile fiber // inferred from electronic annotation /// 0045098 // type III intermediate filament // inferred from electronic annotation /// 0070461 // SAGA-type complex // inferred from direct assay","0005198 // structural molecule activity // inferred from electronic annotation /// 0005200 // structural constituent of cytoskeleton // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008092 // cytoskeletal protein binding // inferred from physical interaction","chr2:220283098-220291456 (+) // 83.37 // q35"]
["11745377_x_at",203.87408,202.56805,206.3208,186.25308,181.83943,197.51746,0.027484894,0.018212795,0.044695377,-0.102929115,-0.13752842,-0.018213272,0.30936384,0.032680646,1.0839924,0.11635459,1.0839924,"up","PTRF",284119.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006353 // transcription termination, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006360 // transcription from RNA polymerase I promoter // traceable author statement /// 0006361 // transcription initiation from RNA polymerase I promoter // inferred from direct assay /// 0006361 // transcription initiation from RNA polymerase I promoter // inferred from electronic annotation /// 0006363 // termination of RNA polymerase I transcription // inferred from direct assay /// 0006363 // termination of RNA polymerase I transcription // traceable author statement /// 0006363 // termination of RNA polymerase I transcription // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005901 // caveola // inferred from direct assay /// 0005901 // caveola // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019843 // rRNA binding // inferred from electronic annotation /// 0042134 // rRNA primary transcript binding // inferred from direct assay /// 0042134 // rRNA primary transcript binding // inferred from electronic annotation","chr17:40555653-40575189 (-) // 80.98 // q21.2"]
["11716065_at",182.75153,202.32182,203.26892,204.24706,187.22691,203.64725,-0.15013742,-0.0033688545,0.0033688545,0.010294437,-0.115232944,0.0060510635,0.9352147,0.8051541,-1.0119116,-0.017083306,1.0119116,"down","SLC37A4",2542.0,"0005975 // carbohydrate metabolic process // traceable author statement /// 0006006 // glucose metabolic process // non-traceable author statement /// 0006810 // transport // non-traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0008643 // carbohydrate transport // inferred from electronic annotation /// 0008645 // hexose transport // traceable author statement /// 0015758 // glucose transport // traceable author statement /// 0015760 // glucose-6-phosphate transport // inferred from direct assay /// 0015760 // glucose-6-phosphate transport // inferred from mutant phenotype /// 0042593 // glucose homeostasis // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005783 // endoplasmic reticulum // non-traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030176 // integral to endoplasmic reticulum membrane // inferred from direct assay","0005215 // transporter activity // non-traceable author statement /// 0005215 // transporter activity // inferred from electronic annotation /// 0015152 // glucose-6-phosphate transmembrane transporter activity // inferred from direct assay /// 0015152 // glucose-6-phosphate transmembrane transporter activity // inferred from mutant phenotype","chr11:118895063-118901622 (-) // 94.39 // q23.3"]
["11746533_a_at",12.655816,11.734192,11.200943,12.446343,12.135988,11.52703,0.084795475,-0.024286509,-0.09138489,0.060716867,0.024286509,-0.049984217,0.90796757,0.73617154,-1.0153415,-0.021965073,1.0153415,"down","KIAA1217",56243.0,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0048706 // embryonic skeletal system development // inferred from sequence or structural similarity","0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation","","chr10:24738361-24834197 (+) // 97.67 // p12.1"]
["11724631_at",12.40983,13.058923,10.056454,16.401096,12.158431,13.54256,-0.036776304,0.036776304,-0.34013796,0.36553264,-0.06630254,0.08924079,0.6139972,0.22861628,-1.1833441,-0.24286968,1.1833441,"down","SYT13",57586.0,"0016192 // vesicle-mediated transport // inferred from electronic annotation","0005887 // integral to plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030133 // transport vesicle // inferred from direct assay","","chr11:45261728-45307884 (-) // 85.81 // p11.2"]
["11755124_a_at",108.89945,114.928825,125.15629,121.629486,126.89795,137.81065,-0.18011522,-0.10237074,0.020618916,-0.020618439,0.040556908,0.15957499,0.5111268,0.13538004,-1.1073619,-0.14712681,1.1073619,"down","SLCO3A1",28232.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0043252 // sodium-independent organic anion transport // traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation","chr15:92397564-92715666 (+) // 99.87 // q26.1"]
["11724692_a_at",60.125496,66.197426,64.76255,70.075714,69.983246,61.040707,-0.122991085,0.015807152,-0.015807629,0.09794617,0.0960412,-0.101196766,0.7458964,0.4102031,-1.05112,-0.07192744,1.05112,"down","CAPN13",92291.0,"0006508 // proteolysis // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0004198 // calcium-dependent cysteine-type endopeptidase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr2:30945636-31030324 (-) // 99.19 // p23.1"]
["11741586_a_at",64.887634,63.12722,67.54852,74.92254,68.23449,64.18079,-0.028990269,-0.0686717,0.028990269,0.17846584,0.04356718,-0.044792175,0.67950255,0.3116005,-1.058463,-0.0819708,1.058463,"down","ERLIN2",11160.0,"0008219 // cell death // inferred from electronic annotation /// 0030433 // ER-associated protein catabolic process // inferred from direct assay","0005737 // cytoplasm // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr8:37594096-37604070 (+) // 94.28 // p11.23"]
["11750136_a_at",18.73576,18.871563,17.546305,18.766985,15.964207,17.292881,0.04731369,0.05773306,-0.04731369,0.049715996,-0.18364024,-0.06830263,0.68090916,0.3133626,1.061904,0.086653285,1.061904,"up","ARHGAP36",158763.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0005096 // GTPase activator activity // inferred from electronic annotation","chrX:130192237-130223228 (+) // 99.91 // q26.1"]
["11732442_s_at",244.30272,259.25406,250.96819,247.70134,243.01917,244.48302,-0.01049757,0.07519865,0.028336525,0.009433746,-0.018097878,-0.009433746,0.6139272,0.22841679,1.0260103,0.037045177,1.0260103,"up","BPTF /// LOC146880","146880 /// 2186","0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006338 // chromatin remodeling // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from mutant phenotype /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006606 // protein import into nucleus // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0007420 // brain development // inferred from mutant phenotype /// 0016568 // chromatin modification // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0016589 // NURF complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008094 // DNA-dependent ATPase activity // inferred from direct assay /// 0008134 // transcription factor binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008565 // protein transporter activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from mutant phenotype /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:65821638-65980494 (+) // 95.57 // q24.2"]
["11760577_at",9.247989,9.35817,9.401821,9.401821,10.751862,7.566262,-0.020443678,-0.0033569336,0.0033569336,0.0033569336,0.19693136,-0.3100028,0.9504756,0.8503267,1.0208402,0.029757002,1.0208402,"up","ZNF610",162963.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:52839564-52871030 (+) // 77.78 // q13.41"]
["11741904_at",17.158852,17.92461,16.788437,14.465267,15.705988,14.454929,0.07956171,0.14255047,0.04807663,-0.16679859,-0.04807639,-0.16782975,0.20401214,0.010920297,1.1628227,0.21763116,1.1628227,"up","FOLR4",390243.0,"","0005576 // extracellular region // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005542 // folic acid binding // inferred from electronic annotation","chr11:94038824-94040858 (+) // 85.2 // q21"]
["11749977_a_at",15.281473,13.058928,15.800628,14.409366,13.84341,16.227053,0.04238844,-0.18435884,0.090586424,-0.04238844,-0.100195885,0.12900567,0.97273594,0.9136766,-1.0087731,-0.012601693,1.0087731,"down","RNF6",6049.0,"0006355 // regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from sequence or structural similarity /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from mutant phenotype /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0030517 // negative regulation of axon extension // inferred from sequence or structural similarity /// 0030517 // negative regulation of axon extension // inferred from electronic annotation /// 0044314 // protein K27-linked ubiquitination // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0060765 // regulation of androgen receptor signaling pathway // inferred from mutant phenotype /// 0070936 // protein K48-linked ubiquitination // inferred from sequence or structural similarity /// 0070936 // protein K48-linked ubiquitination // inferred from electronic annotation /// 0085020 // protein K6-linked ubiquitination // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016605 // PML body // inferred from electronic annotation /// 0030424 // axon // inferred from sequence or structural similarity /// 0030424 // axon // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein ligase activity // inferred from mutant phenotype /// 0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050681 // androgen receptor binding // inferred from physical interaction","chr13:26706252-26796398 (-) // 97.86 // q12.13"]
["11753355_a_at",351.2836,349.9824,389.78506,394.84357,406.38522,359.57254,-0.09184456,-0.09719849,0.058197975,0.07680035,0.118367195,-0.058197975,0.66517055,0.2925519,-1.0638329,-0.08927153,1.0638329,"down","VPS45",11311.0,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // non-traceable author statement /// 0006904 // vesicle docking involved in exocytosis // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0000299 // integral to membrane of membrane fraction // inferred from sequence or structural similarity /// 0000299 // integral to membrane of membrane fraction // inferred from electronic annotation /// 0005622 // intracellular // non-traceable author statement /// 0005768 // endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from sequence or structural similarity /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0010008 // endosome membrane // traceable author statement /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","","chr1:150039399-150054008 (+) // 99.9 // q21.2"]
["11739274_s_at",43.889122,42.644268,43.04199,46.34197,41.6172,43.798046,0.015557766,-0.02595377,-0.012560844,0.09401369,-0.061125755,0.012560844,0.8697014,0.64917135,-1.0159307,-0.022801926,1.0159307,"down","LOC646214 /// PAK2","5062 /// 646214","0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0006469 // negative regulation of protein kinase activity // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006921 // cellular component disassembly involved in apoptotic process // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0016032 // viral reproduction // traceable author statement /// 0016310 // phosphorylation // inferred from direct assay /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from direct assay /// 0031295 // T cell costimulation // traceable author statement /// 0040008 // regulation of growth // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0050690 // regulation of defense response to virus by virus // traceable author statement /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0061098 // positive regulation of protein tyrosine kinase activity // inferred from direct assay /// 2001238 // positive regulation of extrinsic apoptotic signaling pathway // inferred from mutant phenotype /// 2001271 // negative regulation of cysteine-type endopeptidase activity involved in execution phase of apoptosis // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0030296 // protein tyrosine kinase activator activity // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction","chr3:196466727-196559516 (+) // 93.28 // q29"]
["11726686_a_at",133.63696,142.28468,119.9744,133.63696,137.14986,127.72015,0.0,0.090461254,-0.15559196,0.0,0.0374341,-0.06533289,0.9613843,0.8811056,-1.0086395,-0.012410565,1.0086395,"down","IRF5",3663.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0009615 // response to virus // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060337 // type I interferon-mediated signaling pathway // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000975 // regulatory region DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr7:128577990-128590089 (+) // 90.34 // q32.1"]
["11751128_x_at",335.4417,331.99554,328.00705,337.71512,334.8741,320.2101,0.008670807,-0.0062274933,-0.023664474,0.018415451,0.0062274933,-0.058372498,0.9601867,0.8784834,1.0028943,0.004169536,1.0028943,"up","SHISA5",51246.0,"0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0007165 // signal transduction // inferred from mutant phenotype /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from mutant phenotype","0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from mutant phenotype /// 0050699 // WW domain binding // inferred from physical interaction","chr3:48509713-48520968 (-) // 91.12 // p21.31"]
["11746405_at",45.6046,48.145172,55.702908,46.122143,53.69836,45.38011,-0.04724598,0.030965805,0.24132729,-0.030965805,0.18845272,-0.054365158,0.91028816,0.74328023,1.0285712,0.040641733,1.0285712,"up","C14orf162",56936.0,"","","","chr14:70036530-70038088 (-) // 80.5 // q24.1"]
["11724552_s_at",1447.0542,1476.4043,1456.6602,1412.0779,1427.6035,1425.8738,0.00976181,0.03873062,0.019307137,-0.02553749,-0.00976181,-0.011510849,0.2484923,0.018030092,1.0268342,0.03820332,1.0268342,"up","HPCAL1",3241.0,"","","0005509 // calcium ion binding // inferred from electronic annotation /// 0005509 // calcium ion binding // traceable author statement","chr2:10443009-10567730 (+) // 92.6 // p25.1"]
["11750572_a_at",109.314125,121.9751,119.628136,123.04065,122.088356,123.94097,-0.1587758,-6.6947937E-4,-0.028699398,0.011878967,6.699562E-4,0.022397518,0.5913237,0.2045301,-1.0528966,-0.07436379,1.0528966,"down","NPAT",4863.0,"0000083 // regulation of transcription involved in G1/S phase of mitotic cell cycle // inferred from mutant phenotype /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0010468 // regulation of gene expression // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0015030 // Cajal body // inferred from direct assay /// 0015030 // Cajal body // inferred from electronic annotation /// 0044428 // nuclear part // inferred from direct assay","0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from mutant phenotype /// 0003714 // transcription corepressor activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0047485 // protein N-terminus binding // inferred from physical interaction","chr11:108032304-108093343 (-) // 87.81 // q22.3"]
["11763260_at",33.82536,37.496647,25.595491,33.156284,31.760683,35.13165,0.014411449,0.16306782,-0.38780403,-0.014411449,-0.07645178,0.06907749,0.90486056,0.7301454,-1.0445246,-0.0628464,1.0445246,"down","PIGP",51227.0,"0006501 // C-terminal protein lipidation // traceable author statement /// 0006506 // GPI anchor biosynthetic process // inferred from electronic annotation /// 0016254 // preassembly of GPI anchor in ER membrane // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0000506 // glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0017176 // phosphatidylinositol N-acetylglucosaminyltransferase activity // inferred from direct assay /// 0017176 // phosphatidylinositol N-acetylglucosaminyltransferase activity // inferred from electronic annotation","chr21:38437850-38444871 (-) // 88.82 // q22.13"]
["11718266_s_at",83.963326,89.87397,78.37399,87.64309,84.38604,89.545616,-0.03456354,0.06358099,-0.13394737,0.027318,-0.027318,0.058300495,0.7596304,0.43158048,-1.0384344,-0.054410063,1.0384344,"down","SMAD3",4088.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001501 // skeletal system development // inferred from electronic annotation /// 0001649 // osteoblast differentiation // inferred from electronic annotation /// 0001657 // ureteric bud development // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from mutant phenotype /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001707 // mesoderm formation // inferred from electronic annotation /// 0001756 // somitogenesis // inferred from electronic annotation /// 0001836 // release of cytochrome c from mitochondria // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0001933 // negative regulation of protein phosphorylation // inferred from mutant phenotype /// 0001947 // heart looping // inferred from electronic annotation /// 0002076 // osteoblast development // inferred from electronic annotation /// 0002520 // immune system development // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006810 // transport // inferred from direct assay /// 0006917 // induction of apoptosis // inferred from mutant phenotype /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from mutant phenotype /// 0006955 // immune response // inferred from mutant phenotype /// 0007050 // cell cycle arrest // inferred from mutant phenotype /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from direct assay /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0007183 // SMAD protein complex assembly // inferred from direct assay /// 0007369 // gastrulation // inferred from electronic annotation /// 0007492 // endoderm development // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0008633 // activation of pro-apoptotic gene products // inferred from electronic annotation /// 0008637 // apoptotic mitochondrial changes // inferred from electronic annotation /// 0009880 // embryonic pattern specification // inferred from electronic annotation /// 0010694 // positive regulation of alkaline phosphatase activity // inferred from electronic annotation /// 0010718 // positive regulation of epithelial to mesenchymal transition // inferred from mutant phenotype /// 0016202 // regulation of striated muscle tissue development // inferred from electronic annotation /// 0017015 // regulation of transforming growth factor beta receptor signaling pathway // inferred from mutant phenotype /// 0017015 // regulation of transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0019049 // evasion of host defenses by virus // inferred from direct assay /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0030501 // positive regulation of bone mineralization // inferred from electronic annotation /// 0030878 // thyroid gland development // inferred from electronic annotation /// 0031053 // primary miRNA processing // traceable author statement /// 0032332 // positive regulation of chondrocyte differentiation // inferred from electronic annotation /// 0032731 // positive regulation of interleukin-1 beta production // inferred from electronic annotation /// 0032909 // regulation of transforming growth factor beta2 production // inferred from mutant phenotype /// 0032916 // positive regulation of transforming growth factor beta3 production // inferred from electronic annotation /// 0032924 // activin receptor signaling pathway // inferred from mutant phenotype /// 0033689 // negative regulation of osteoblast proliferation // inferred from electronic annotation /// 0035413 // positive regulation of catenin import into nucleus // inferred from mutant phenotype /// 0038092 // nodal signaling pathway // inferred from mutant phenotype /// 0042060 // wound healing // traceable author statement /// 0042110 // T cell activation // inferred from electronic annotation /// 0042177 // negative regulation of protein catabolic process // inferred from mutant phenotype /// 0042993 // positive regulation of transcription factor import into nucleus // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0045216 // cell-cell junction organization // inferred from mutant phenotype /// 0045668 // negative regulation of osteoblast differentiation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045930 // negative regulation of mitotic cell cycle // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048340 // paraxial mesoderm morphogenesis // inferred from electronic annotation /// 0048589 // developmental growth // inferred from electronic annotation /// 0048617 // embryonic foregut morphogenesis // inferred from electronic annotation /// 0048701 // embryonic cranial skeleton morphogenesis // inferred from electronic annotation /// 0050678 // regulation of epithelial cell proliferation // inferred from electronic annotation /// 0050728 // negative regulation of inflammatory response // inferred from electronic annotation /// 0050776 // regulation of immune response // inferred from electronic annotation /// 0050821 // protein stabilization // inferred from mutant phenotype /// 0050927 // positive regulation of positive chemotaxis // inferred from electronic annotation /// 0051098 // regulation of binding // inferred from electronic annotation /// 0051496 // positive regulation of stress fiber assembly // inferred from electronic annotation /// 0051894 // positive regulation of focal adhesion assembly // inferred from electronic annotation /// 0060039 // pericardium development // inferred from electronic annotation /// 0060290 // transdifferentiation // inferred from electronic annotation /// 0061045 // negative regulation of wound healing // inferred from electronic annotation /// 0070306 // lens fiber cell differentiation // inferred from electronic annotation /// 0090263 // positive regulation of canonical Wnt receptor signaling pathway // inferred from mutant phenotype","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005637 // nuclear inner membrane // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0043235 // receptor complex // inferred from mutant phenotype /// 0071141 // SMAD protein complex // inferred from direct assay","0000987 // core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0000988 // protein binding transcription factor activity // inferred from direct assay /// 0001102 // RNA polymerase II activating transcription factor binding // inferred from physical interaction /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005160 // transforming growth factor beta receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0005518 // collagen binding // inferred from electronic annotation /// 0008013 // beta-catenin binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from direct assay /// 0019901 // protein kinase binding // inferred from physical interaction /// 0019902 // phosphatase binding // inferred from physical interaction /// 0030618 // transforming growth factor beta receptor, pathway-specific cytoplasmic mediator activity // inferred from direct assay /// 0031490 // chromatin DNA binding // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0043130 // ubiquitin binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0046332 // SMAD binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070410 // co-SMAD binding // inferred from physical interaction /// 0070412 // R-SMAD binding // inferred from physical interaction","chr15:67357955-67487510 (+) // 95.19 // q22.33"]
["11728066_at",11.029722,9.297627,9.988415,10.741013,14.510708,10.394639,0.06191182,-0.18455052,-0.08115721,0.023645163,0.45763326,-0.023645163,0.64075035,0.2620338,-1.1651182,-0.22047634,1.1651182,"down","PTGDR2",11251.0,"0006935 // chemotaxis // inferred from direct assay /// 0006935 // chemotaxis // inferred from electronic annotation /// 0006955 // immune response // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from direct assay /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007193 // adenylate cyclase-inhibiting G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0019722 // calcium-mediated signaling // inferred from direct assay /// 0019722 // calcium-mediated signaling // inferred from electronic annotation /// 0045745 // positive regulation of G-protein coupled receptor protein signaling pathway // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0001785 // prostaglandin J receptor activity // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from direct assay /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement /// 0004956 // prostaglandin D receptor activity // inferred from direct assay /// 0004956 // prostaglandin D receptor activity // inferred from electronic annotation /// 0004958 // prostaglandin F receptor activity // inferred from electronic annotation /// 0004982 // N-formyl peptide receptor activity // inferred from electronic annotation","chr11:60618396-60623444 (-) // 81.26 // q12.2"]
["11757321_a_at",1081.1678,1113.1659,1095.4769,1067.0359,1036.5043,1062.4286,0.009490967,0.051568985,0.028459549,-0.009490967,-0.05137348,-0.015733719,0.31998467,0.03607642,1.0391275,0.05537264,1.0391275,"up","TAPBP",6892.0,"0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006461 // protein complex assembly // traceable author statement /// 0006890 // retrograde vesicle-mediated transport, Golgi to ER // non-traceable author statement /// 0006955 // immune response // traceable author statement /// 0019885 // antigen processing and presentation of endogenous peptide antigen via MHC class I // inferred from electronic annotation /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0050823 // peptide antigen stabilization // inferred from sequence or structural similarity","0000139 // Golgi membrane // inferred from direct assay /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030670 // phagocytic vesicle membrane // traceable author statement /// 0042824 // MHC class I peptide loading complex // non-traceable author statement /// 0042825 // TAP complex // inferred from direct assay /// 0071556 // integral to lumenal side of endoplasmic reticulum membrane // traceable author statement","0005515 // protein binding // inferred from physical interaction /// 0015433 // peptide antigen-transporting ATPase activity // traceable author statement /// 0042288 // MHC class I protein binding // traceable author statement /// 0042605 // peptide antigen binding // traceable author statement /// 0046978 // TAP1 binding // inferred from physical interaction /// 0046978 // TAP1 binding // traceable author statement /// 0046979 // TAP2 binding // inferred from physical interaction /// 0046979 // TAP2 binding // traceable author statement /// 0051082 // unfolded protein binding // traceable author statement","chr6:33267470-33267918 (-) // 41.03 // p21.32"]
["11725464_a_at",249.15271,260.27386,274.75305,263.61295,243.89859,243.25615,-0.03150034,0.031499863,0.109604836,0.04989052,-0.062248707,-0.066054344,0.68849325,0.3240985,1.0443985,0.062672354,1.0443985,"up","SLC4A2",6522.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006811 // ion transport // inferred from electronic annotation /// 0006820 // anion transport // traceable author statement /// 0006820 // anion transport // inferred from electronic annotation /// 0006821 // chloride transport // inferred from electronic annotation /// 0015701 // bicarbonate transport // traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0005624 // membrane fraction // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation /// 0005452 // inorganic anion exchanger activity // inferred from electronic annotation /// 0008509 // anion transmembrane transporter activity // traceable author statement /// 0008509 // anion transmembrane transporter activity // inferred from electronic annotation /// 0015108 // chloride transmembrane transporter activity // inferred from electronic annotation /// 0015297 // antiporter activity // inferred from electronic annotation /// 0015301 // anion:anion antiporter activity // inferred from electronic annotation","chr7:150756667-150773614 (+) // 97.5 // q36.1"]
["11730323_at",87.12236,85.586174,79.307335,96.234856,102.074356,102.04333,-0.07175779,-0.09742308,-0.20734692,0.07175827,0.15674734,0.15630913,0.1770622,0.0072426093,-1.1923277,-0.25378084,1.1923277,"down","RPS29",6235.0,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // inferred by curator /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral infectious cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0015935 // small ribosomal subunit // inferred from direct assay /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003735 // structural constituent of ribosome // inferred from direct assay /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr14:50043494-50053094 (-) // 50.7 // q21.3"]
["11715339_at",7.8107743,7.618738,7.668208,7.668208,7.8931794,8.409995,0.013288021,-0.022625446,-0.013288021,-0.013288021,0.028429031,0.119927645,0.64461607,0.2669501,-1.037107,-0.052564733,1.037107,"down","TTN",7273.0,"0002576 // platelet degranulation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006936 // muscle contraction // non-traceable author statement /// 0006936 // muscle contraction // traceable author statement /// 0006941 // striated muscle contraction // traceable author statement /// 0007076 // mitotic chromosome condensation // inferred from expression pattern /// 0007596 // blood coagulation // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030049 // muscle filament sliding // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0030240 // skeletal muscle thin filament assembly // inferred from mutant phenotype /// 0030241 // skeletal muscle myosin thick filament assembly // inferred from mutant phenotype /// 0045214 // sarcomere organization // inferred from mutant phenotype /// 0045859 // regulation of protein kinase activity // inferred from mutant phenotype /// 0048739 // cardiac muscle fiber development // inferred from mutant phenotype /// 0048769 // sarcomerogenesis // inferred from mutant phenotype /// 0050790 // regulation of catalytic activity // inferred from mutant phenotype /// 0051592 // response to calcium ion // inferred from direct assay /// 0055003 // cardiac myofibril assembly // inferred from mutant phenotype /// 0055008 // cardiac muscle tissue morphogenesis // inferred from mutant phenotype","0000794 // condensed nuclear chromosome // inferred from direct assay /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005865 // striated muscle thin filament // inferred from direct assay /// 0030018 // Z disc // inferred from direct assay /// 0031430 // M band // inferred from direct assay /// 0031674 // I band // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0002020 // protease binding // inferred from physical interaction /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from physical interaction /// 0005516 // calmodulin binding // traceable author statement /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008307 // structural constituent of muscle // inferred from mutant phenotype /// 0008307 // structural constituent of muscle // traceable author statement /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0031433 // telethonin binding // inferred from sequence or structural similarity /// 0042802 // identical protein binding // inferred from physical interaction /// 0042805 // actinin binding // inferred from direct assay /// 0043621 // protein self-association // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051015 // actin filament binding // inferred from direct assay /// 0051371 // muscle alpha-actinin binding // inferred from physical interaction","chr2:179610044-179672150 (-) // 99.85 // q31.2"]
["11755582_x_at",44.11587,43.42809,47.0435,50.52026,45.221104,45.045673,-0.03289461,-0.055563927,0.05980301,0.16266966,0.0028038025,-0.0028038025,0.72579926,0.38018686,-1.0451971,-0.06377507,1.0451971,"down","ZFP30",22835.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:38123462-38146312 (-) // 68.43 // q13.12"]
["11716822_a_at",628.04016,619.5508,630.9309,639.9661,649.0269,663.34485,-0.016881943,-0.03651619,-0.010256767,0.010256767,0.030539513,0.0620203,0.30247766,0.030948924,-1.0392123,-0.055490475,1.0392123,"down","BDH2 /// SLC9B2","133308 /// 56898","0006635 // fatty acid beta-oxidation // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // inferred from electronic annotation /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009239 // enterobactin biosynthetic process // inferred from electronic annotation /// 0015992 // proton transport // inferred from electronic annotation /// 0019290 // siderophore biosynthetic process // inferred from sequence or structural similarity /// 0019290 // siderophore biosynthetic process // inferred from electronic annotation /// 0042168 // heme metabolic process // inferred from sequence or structural similarity /// 0055072 // iron ion homeostasis // inferred from sequence or structural similarity /// 0055072 // iron ion homeostasis // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003858 // 3-hydroxybutyrate dehydrogenase activity // inferred from direct assay /// 0003858 // 3-hydroxybutyrate dehydrogenase activity // inferred from electronic annotation /// 0008667 // 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase activity // inferred from electronic annotation /// 0015297 // antiporter activity // inferred from electronic annotation /// 0015299 // solute:hydrogen antiporter activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016628 // oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor // inferred from sequence or structural similarity /// 0016628 // oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0051287 // NAD binding // inferred from direct assay","chr4:103998764-104021064 (-) // 75.83 // q24"]
["11750944_a_at",114.644165,117.5111,122.622086,125.58575,111.60612,122.62196,-0.06634426,-0.03071022,0.03071165,0.06516552,-0.105091095,0.03071022,0.91943014,0.7638065,-1.0132867,-0.019042443,1.0132867,"down","EXOC2",55770.0,"0006810 // transport // inferred from electronic annotation /// 0006887 // exocytosis // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0000145 // exocyst // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement","0005515 // protein binding // inferred from physical interaction /// 0017160 // Ral GTPase binding // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from electronic annotation","chr6:486517-693117 (-) // 99.84 // p25.3"]
["11759604_s_at",44.972973,41.781982,45.59631,41.335514,44.767807,48.603046,0.0032982826,-0.10287905,0.02315712,-0.11837816,-0.0032982826,0.11528683,0.9259463,0.77957255,-1.016313,-0.023344724,1.016313,"down","BCL2L13",23786.0,"0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // non-traceable author statement /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // non-traceable author statement /// 0042981 // regulation of apoptotic process // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005739 // mitochondrion // non-traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation","0008656 // cysteine-type endopeptidase activator activity involved in apoptotic process // non-traceable author statement","chr22:18121569-18213677 (+) // 94.84 // q11.21"]
["11732127_a_at",5774.9893,5891.825,5399.55,6237.4434,6334.952,6075.4683,-0.05103588,-0.022140503,-0.14801693,0.060100555,0.08247852,0.022140503,0.3255172,0.037406504,-1.0932608,-0.12863755,1.0932608,"down","CCT4",10575.0,"0006457 // protein folding // traceable author statement /// 0006457 // protein folding // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0044267 // cellular protein metabolic process // inferred from electronic annotation /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005832 // chaperonin-containing T-complex // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0042470 // melanosome // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // traceable author statement","chr2:62095223-62116028 (-) // 98.32 // p15"]
["11751365_x_at",31.671026,32.345795,32.660366,29.165924,30.700197,32.79155,-0.015207291,0.015207291,0.029170036,-0.13408709,-0.060122967,0.034953117,0.65719235,0.28271163,1.0444975,0.06280903,1.0444975,"up","SLC47A1",55244.0,"0006810 // transport // inferred from electronic annotation /// 0006855 // drug transmembrane transport // inferred from electronic annotation /// 0015695 // organic cation transport // inferred from electronic annotation /// 0015893 // drug transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005624 // membrane fraction // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005451 // monovalent cation:hydrogen antiporter activity // inferred from electronic annotation /// 0015238 // drug transmembrane transporter activity // inferred from electronic annotation /// 0015297 // antiporter activity // inferred from electronic annotation","chr17:19458885-19481250 (+) // 99.78 // p11.2"]
["11719357_at",89.308716,88.995255,82.20735,94.04067,95.53151,98.48414,-0.03724146,-0.04231453,-0.15677595,0.037241936,0.05993414,0.103848934,0.29405117,0.028838776,-1.106333,-0.14578572,1.106333,"down","FAM109B",150368.0,"0001881 // receptor recycling // inferred from mutant phenotype /// 0007032 // endosome organization // inferred from mutant phenotype /// 0042147 // retrograde transport, endosome to Golgi // inferred from mutant phenotype","0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0005769 // early endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from direct assay /// 0030136 // clathrin-coated vesicle // inferred from direct assay /// 0030136 // clathrin-coated vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0055037 // recycling endosome // inferred from direct assay /// 0055037 // recycling endosome // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from physical interaction","chr22:42470254-42475442 (+) // 93.62 // q13.2"]
["11742281_at",20.51597,17.946218,19.35816,15.296666,20.33583,18.10635,0.13202858,-0.06103897,0.04822302,-0.29150152,0.119305134,-0.04822302,0.76326346,0.43849868,1.0816327,0.113210715,1.0816327,"up","NAF1",92345.0,"0006364 // rRNA processing // inferred from electronic annotation /// 0031120 // snRNA pseudouridine synthesis // inferred from electronic annotation /// 0042254 // ribosome biogenesis // inferred from direct assay /// 0042254 // ribosome biogenesis // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005732 // small nucleolar ribonucleoprotein complex // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0030054 // cell junction // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003723 // RNA binding // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0030515 // snoRNA binding // inferred from electronic annotation","chr4:164054303-164088073 (-) // 72.29 // q32.2"]
["11761969_x_at",11.485471,12.165842,12.690708,11.858633,10.86097,9.183568,-0.023063898,0.05996251,0.1208992,0.023064137,-0.103720665,-0.345747,0.55251396,0.16836467,1.1445129,0.19473371,1.1445129,"up","FLJ39061 /// LOC100652824","100652824 /// 165057","","","","chr2:203000438-203062436 (+) // 57.57 // q33.1"]
["11759197_at",8.023924,7.7347503,8.991759,7.566263,7.7575545,7.325421,0.05082941,-0.0021235943,0.21512508,-0.0338974,0.0021235943,-0.080566645,0.526459,0.14616577,1.0908029,0.12539046,1.0908029,"up","RAB9B",51209.0,"0006810 // transport // inferred from electronic annotation /// 0006895 // Golgi to endosome transport // non-traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // non-traceable author statement /// 0005525 // GTP binding // inferred from electronic annotation","chrX:103077254-103087212 (-) // 89.7 // q22.2"]
["11754043_a_at",1905.4222,1882.8025,2078.7417,1904.3745,1811.1497,1881.2847,0.009011269,-0.008217812,0.13461113,0.008217812,-0.064193726,-0.009381294,0.6324625,0.25190556,1.0474784,0.06692055,1.0474784,"up","RHOA",387.0,"0000902 // cell morphogenesis // inferred from electronic annotation /// 0006184 // GTP catabolic process // traceable author statement /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007160 // cell-matrix adhesion // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007266 // Rho protein signal transduction // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007519 // skeletal muscle tissue development // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0030036 // actin cytoskeleton organization // traceable author statement /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0030334 // regulation of cell migration // inferred from mutant phenotype /// 0030521 // androgen receptor signaling pathway // inferred from electronic annotation /// 0033144 // negative regulation of intracellular steroid hormone receptor signaling pathway // inferred from electronic annotation /// 0033688 // regulation of osteoblast proliferation // inferred from sequence or structural similarity /// 0033688 // regulation of osteoblast proliferation // inferred from electronic annotation /// 0042346 // positive regulation of NF-kappaB import into nucleus // non-traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from expression pattern /// 0043149 // stress fiber assembly // inferred from electronic annotation /// 0043297 // apical junction assembly // inferred from mutant phenotype /// 0043297 // apical junction assembly // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0043931 // ossification involved in bone maturation // inferred from sequence or structural similarity /// 0043931 // ossification involved in bone maturation // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from mutant phenotype /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0050770 // regulation of axonogenesis // traceable author statement /// 0050771 // negative regulation of axonogenesis // traceable author statement /// 0050772 // positive regulation of axonogenesis // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement /// 0051301 // cell division // inferred from electronic annotation /// 0051496 // positive regulation of stress fiber assembly // inferred from direct assay /// 0061383 // trabecula morphogenesis // inferred from sequence or structural similarity /// 0061383 // trabecula morphogenesis // inferred from electronic annotation /// 0071777 // positive regulation of cell cycle cytokinesis // inferred from mutant phenotype /// 0090307 // spindle assembly involved in mitosis // inferred from mutant phenotype","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005938 // cell cortex // inferred from direct assay /// 0005938 // cell cortex // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030496 // midbody // inferred from electronic annotation /// 0032154 // cleavage furrow // inferred from direct assay /// 0032154 // cleavage furrow // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0043296 // apical junction complex // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0017022 // myosin binding // inferred from physical interaction","chr3:49397620-49449360 (-) // 97.65 // p21.31"]
["11717147_a_at",167.23584,176.00774,181.62032,182.20515,172.1171,178.23618,-0.082830906,-0.009075642,0.036210537,0.040849686,-0.04132366,0.009075165,0.8643179,0.6377993,-1.0149667,-0.021432431,1.0149667,"down","PTPN1",5770.0,"0006470 // protein dephosphorylation // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008286 // insulin receptor signaling pathway // inferred from electronic annotation /// 0009966 // regulation of signal transduction // inferred from mutant phenotype /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0030100 // regulation of endocytosis // inferred from direct assay /// 0030168 // platelet activation // traceable author statement /// 0030968 // endoplasmic reticulum unfolded protein response // inferred from direct assay /// 0031532 // actin cytoskeleton reorganization // inferred from mutant phenotype /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from direct assay /// 0035335 // peptidyl-tyrosine dephosphorylation // traceable author statement /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation /// 0046626 // regulation of insulin receptor signaling pathway // inferred from electronic annotation /// 0046627 // negative regulation of insulin receptor signaling pathway // non-traceable author statement /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060334 // regulation of interferon-gamma-mediated signaling pathway // traceable author statement /// 0060337 // type I interferon-mediated signaling pathway // traceable author statement /// 0060338 // regulation of type I interferon-mediated signaling pathway // traceable author statement /// 0060397 // JAK-STAT cascade involved in growth hormone signaling pathway // traceable author statement","0005626 // insoluble fraction // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from direct assay /// 0004725 // protein tyrosine phosphatase activity // traceable author statement /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005158 // insulin receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from physical interaction /// 0046875 // ephrin receptor binding // inferred from physical interaction","chr20:49126533-49201656 (+) // 97.36 // q13.13"]
["11758717_x_at",5005.833,5085.426,5173.273,5239.4956,5278.682,5229.537,-0.05527115,-0.032512665,-0.007803917,0.010545731,0.021297455,0.0078029633,0.31440505,0.034522872,-1.0317389,-0.045077886,1.0317389,"down","NDUFA4",4697.0,"0006120 // mitochondrial electron transport, NADH to ubiquinone // non-traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0022900 // electron transport chain // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005747 // mitochondrial respiratory chain complex I // inferred from direct assay /// 0005747 // mitochondrial respiratory chain complex I // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0070469 // respiratory chain // inferred from electronic annotation","0008137 // NADH dehydrogenase (ubiquinone) activity // non-traceable author statement /// 0008137 // NADH dehydrogenase (ubiquinone) activity // traceable author statement","chr7:10971577-10979804 (-) // 64.93 // p21.3"]
["11731886_at",8.738317,9.038199,8.378021,9.769979,8.102713,8.346143,0.03037262,0.07905269,-0.030372858,0.19137287,-0.07857752,-0.035872936,0.9980961,0.99405414,1.0004922,7.0994167E-4,1.0004922,"up","SCGB1D2",10647.0,"","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement","","chr11:62009681-62012279 (+) // 90.71 // q12.3"]
["11751449_x_at",48.13978,52.230064,49.934082,53.179546,45.7984,45.16252,-0.026397705,0.09125328,0.026397705,0.11724424,-0.09833002,-0.11850119,0.79108495,0.4849779,1.0450801,0.063613474,1.0450801,"up","CEP41",95681.0,"0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0018095 // protein polyglutamylation // inferred from sequence or structural similarity /// 0030030 // cell projection organization // inferred from electronic annotation /// 0042384 // cilium assembly // inferred from mutant phenotype /// 0042384 // cilium assembly // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005814 // centriole // inferred from direct assay /// 0005814 // centriole // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0005932 // microtubule basal body // inferred from electronic annotation /// 0036064 // cilium basal body // inferred from direct assay /// 0036064 // cilium basal body // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0072372 // primary cilium // inferred from direct assay /// 0072372 // primary cilium // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr7:130038371-130080867 (-) // 99.84 // q32.2"]
["11748590_x_at",6.3094473,5.9657364,5.447988,6.13822,6.0136905,6.1859593,0.05447817,-0.02633524,-0.15731192,0.014784813,-0.014784813,0.025961876,0.7746589,0.45715347,-1.036493,-0.051710293,1.036493,"down","EFCAB6",64800.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr22:43936054-44208117 (-) // 99.88 // q13.2"]
["11754682_a_at",21.824028,22.92966,24.760845,21.665882,24.425453,22.80527,-0.06737375,0.003923893,0.11476946,-0.07786608,0.095094204,-0.003923893,0.9578554,0.87049556,1.0088221,0.012671762,1.0088221,"up","PLA2G6",8398.0,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0016042 // lipid catabolic process // inferred from electronic annotation /// 0032049 // cardiolipin biosynthetic process // inferred from mutant phenotype","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation","0004623 // phospholipase A2 activity // traceable author statement /// 0004623 // phospholipase A2 activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0047499 // calcium-independent phospholipase A2 activity // inferred from electronic annotation","chr22:38507502-38577835 (-) // 99.17 // q13.1"]
["11755542_a_at",20.065828,17.396408,18.441328,17.05949,17.357388,19.310787,0.16387463,-0.042076588,0.042076588,-0.07029152,-0.04531622,0.10854101,0.8113653,0.5246945,1.0402862,0.05698047,1.0402862,"up","ZNF671",79891.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:58231122-58238992 (-) // 98.34 // q13.43"]
["11749263_a_at",99.78182,99.05288,86.49281,97.92579,90.96306,114.005165,0.018832684,0.008255482,-0.18736315,-0.008255005,-0.11466265,0.21108341,0.80772007,0.5181552,-1.0590814,-0.08281352,1.0590814,"down","SLC2A6",11182.0,"0006810 // transport // inferred from electronic annotation /// 0008643 // carbohydrate transport // inferred from electronic annotation /// 0015758 // glucose transport // non-traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation /// 0005355 // glucose transmembrane transporter activity // non-traceable author statement /// 0022857 // transmembrane transporter activity // inferred from electronic annotation /// 0022891 // substrate-specific transmembrane transporter activity // inferred from electronic annotation","chr9:136340163-136344196 (-) // 74.76 // q34.2"]
["11747435_s_at",9.709016,8.863648,9.124783,9.536094,9.604201,8.976126,0.057730675,-0.07369375,-0.031804323,0.031804323,0.042071342,-0.05550146,0.8835942,0.6797013,-1.0153993,-0.022047224,1.0153993,"down","LOC647859 /// OCLN","100506658 /// 647859","0006461 // protein complex assembly // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006921 // cellular component disassembly involved in apoptotic process // traceable author statement /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0033574 // response to testosterone stimulus // inferred from electronic annotation /// 0045216 // cell-cell junction organization // inferred from mutant phenotype /// 0046498 // S-adenosylhomocysteine metabolic process // inferred from electronic annotation /// 0046500 // S-adenosylmethionine metabolic process // inferred from electronic annotation","0005625 // soluble fraction // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from direct assay /// 0005923 // tight junction // inferred from direct assay /// 0005923 // tight junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016327 // apicolateral plasma membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from direct assay /// 0030054 // cell junction // inferred from electronic annotation","0005198 // structural molecule activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008119 // thiopurine S-methyltransferase activity // inferred from electronic annotation /// 0008757 // S-adenosylmethionine-dependent methyltransferase activity // inferred from electronic annotation","chr5:68788589-68850125 (+) // 92.85 // q13.2"]
["11739271_s_at",540.0989,540.9228,525.2337,567.044,580.87354,562.79474,-0.030792236,-0.028593063,-0.071056366,0.039444923,0.07420826,0.028593063,0.19310963,0.009559762,-1.0650314,-0.09089598,1.0650314,"down","PAK2",5062.0,"0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0006469 // negative regulation of protein kinase activity // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006921 // cellular component disassembly involved in apoptotic process // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0016032 // viral reproduction // traceable author statement /// 0016310 // phosphorylation // inferred from direct assay /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from direct assay /// 0031295 // T cell costimulation // traceable author statement /// 0040008 // regulation of growth // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0050690 // regulation of defense response to virus by virus // traceable author statement /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0061098 // positive regulation of protein tyrosine kinase activity // inferred from direct assay /// 2001238 // positive regulation of extrinsic apoptotic signaling pathway // inferred from mutant phenotype /// 2001271 // negative regulation of cysteine-type endopeptidase activity involved in execution phase of apoptosis // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0030296 // protein tyrosine kinase activator activity // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction","chr3:196466727-196559516 (+) // 93.28 // q29"]
["11738428_a_at",5.6559224,5.331692,5.9578032,4.923499,4.9249773,5.908324,0.04258442,-0.04258442,0.11760259,-0.15749383,-0.15706086,0.10557103,0.6959488,0.33359665,1.0783774,0.10886212,1.0783774,"up","POU1F1",5449.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","0001102 // RNA polymerase II activating transcription factor binding // inferred from physical interaction /// 0001105 // RNA polymerase II transcription coactivator activity // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr3:87308782-87325737 (-) // 99.53 // p11.2"]
["11763045_x_at",7.7690434,10.010472,9.304941,11.285417,8.592889,9.154562,-0.24850678,0.117194414,0.011753082,0.29014397,-0.10310054,-0.011753082,0.83514035,0.57459754,-1.0704988,-0.09828321,1.0704988,"down",0.29014397,-0.10310054,-0.011753082,-0.24850678,0.117194414,0.011753082]
["11734549_s_at",912.20654,920.51794,969.37354,1040.4165,999.5947,969.6274,-0.08788109,-0.07479572,-1.8882751E-4,0.10184765,0.044101715,1.8882751E-4,0.39079916,0.062304758,-1.0740055,-0.103001356,1.0740055,"down","LOC100652886 /// LOC100653157 /// TGFBI","100652886 /// 100653157 /// 7045","0001525 // angiogenesis // inferred from expression pattern /// 0002062 // chondrocyte differentiation // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007162 // negative regulation of cell adhesion // traceable author statement /// 0007601 // visual perception // inferred from electronic annotation /// 0007601 // visual perception // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005604 // basement membrane // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from sequence or structural similarity","0005178 // integrin binding // traceable author statement /// 0050840 // extracellular matrix binding // inferred from electronic annotation","chr5:135364583-135399507 (+) // 97.57 // q31.1"]
["11724139_s_at",321.11288,323.30115,324.37704,297.16263,309.57336,313.68213,0.016888618,0.026686668,0.031479836,-0.09493923,-0.035910606,-0.016888618,0.31965792,0.035903677,1.0528241,0.074264474,1.0528241,"up","SACS",26278.0,"0006457 // protein folding // non-traceable author statement /// 0008219 // cell death // inferred from electronic annotation /// 0090084 // negative regulation of inclusion body assembly // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0030424 // axon // traceable author statement /// 0030425 // dendrite // traceable author statement /// 0070852 // cell body fiber // traceable author statement","0005524 // ATP binding // inferred from electronic annotation /// 0030544 // Hsp70 protein binding // inferred from physical interaction /// 0031072 // heat shock protein binding // inferred from electronic annotation /// 0051087 // chaperone binding // inferred from direct assay /// 0070628 // proteasome binding // inferred from physical interaction","chr13:23902965-24007867 (-) // 99.21 // q12.12"]
["11731912_s_at",26.243317,22.780582,21.96686,21.532486,23.701782,25.531641,0.17554998,-0.028595448,-0.08107138,-0.109885216,0.028595448,0.13588619,0.9922938,0.9733298,1.0026112,0.0037621981,1.0026112,"up","GPR12",2835.0,"0006874 // cellular calcium ion homeostasis // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement /// 0031210 // phosphatidylcholine binding // inferred from electronic annotation","chr13:27329340-27334922 (-) // 88.68 // q12.13"]
["11726731_a_at",237.07727,227.7623,244.92436,242.12706,249.39749,241.39273,-0.028216362,-0.08604431,0.018762589,0.0021910667,0.04487276,-0.0021910667,0.62213624,0.23873979,-1.0329642,-0.046790294,1.0329642,"down","AGGF1",55109.0,"0001525 // angiogenesis // inferred from electronic annotation /// 0001570 // vasculogenesis // traceable author statement /// 0001938 // positive regulation of endothelial cell proliferation // inferred from direct assay /// 0006396 // RNA processing // traceable author statement /// 0007155 // cell adhesion // inferred from direct assay /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045766 // positive regulation of angiogenesis // inferred from direct assay","0005576 // extracellular region // inferred from direct assay /// 0005576 // extracellular region // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0043499 // eukaryotic cell surface binding // inferred from direct assay","chr5:76326192-76361038 (+) // 95.95 // q13.3"]
["11750787_a_at",8.284749,8.0370865,7.4798727,7.8659353,7.916864,7.7482743,0.07018423,0.026398897,-0.07726002,-0.004655361,0.004655361,-0.026398897,0.91358966,0.7501626,1.01062,0.015240633,1.01062,"up","SLC24A2",25769.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006811 // ion transport // inferred from electronic annotation /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0006874 // cellular calcium ion homeostasis // inferred from electronic annotation /// 0007601 // visual perception // inferred from electronic annotation /// 0007612 // learning // inferred from electronic annotation /// 0007613 // memory // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0060291 // long-term synaptic potentiation // inferred from electronic annotation /// 0060292 // long term synaptic depression // inferred from electronic annotation /// 0070588 // calcium ion transmembrane transport // inferred from electronic annotation","0005624 // membrane fraction // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005262 // calcium channel activity // inferred from electronic annotation /// 0015293 // symporter activity // inferred from electronic annotation /// 0015297 // antiporter activity // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation","chr9:19515977-19786926 (-) // 97.74 // p22.1"]
["11751416_a_at",10.048586,10.993687,9.148732,10.048586,10.048586,9.62453,0.0,0.12968278,-0.13534856,0.0,0.0,-0.06220436,0.94185334,0.8237665,1.0131489,0.018846225,1.0131489,"up","ERBB2",2064.0,"0001889 // liver development // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from sequence or structural similarity /// 0001934 // positive regulation of protein phosphorylation // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007165 // signal transduction // inferred from direct assay /// 0007166 // cell surface receptor signaling pathway // inferred from direct assay /// 0007167 // enzyme linked receptor protein signaling pathway // traceable author statement /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from direct assay /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // traceable author statement /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // non-traceable author statement /// 0007399 // nervous system development // traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007422 // peripheral nervous system development // inferred from electronic annotation /// 0007507 // heart development // traceable author statement /// 0007507 // heart development // inferred from electronic annotation /// 0007519 // skeletal muscle tissue development // inferred from electronic annotation /// 0007528 // neuromuscular junction development // inferred from electronic annotation /// 0008045 // motor axon guidance // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0010001 // glial cell differentiation // inferred from electronic annotation /// 0014065 // phosphatidylinositol 3-kinase cascade // inferred from direct assay /// 0014068 // positive regulation of phosphatidylinositol 3-kinase cascade // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0023014 // signal transduction by phosphorylation // traceable author statement /// 0023014 // signal transduction by phosphorylation // inferred from electronic annotation /// 0030307 // positive regulation of cell growth // inferred from mutant phenotype /// 0030879 // mammary gland development // traceable author statement /// 0032321 // positive regulation of Rho GTPase activity // inferred from sequence or structural similarity /// 0032321 // positive regulation of Rho GTPase activity // inferred from electronic annotation /// 0032570 // response to progesterone stimulus // inferred from electronic annotation /// 0032886 // regulation of microtubule-based process // inferred from direct assay /// 0033088 // negative regulation of immature T cell proliferation in thymus // inferred from electronic annotation /// 0042060 // wound healing // inferred from direct assay /// 0042493 // response to drug // inferred from electronic annotation /// 0042552 // myelination // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043406 // positive regulation of MAP kinase activity // inferred from direct assay /// 0043410 // positive regulation of MAPK cascade // inferred from electronic annotation /// 0043586 // tongue development // inferred from electronic annotation /// 0045727 // positive regulation of translation // inferred from mutant phenotype /// 0045765 // regulation of angiogenesis // non-traceable author statement /// 0045785 // positive regulation of cell adhesion // inferred from direct assay /// 0045943 // positive regulation of transcription from RNA polymerase I promoter // inferred from mutant phenotype /// 0045945 // positive regulation of transcription from RNA polymerase III promoter // inferred from direct assay /// 0046579 // positive regulation of Ras protein signal transduction // inferred from electronic annotation /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from electronic annotation /// 0048015 // phosphatidylinositol-mediated signaling // non-traceable author statement /// 0048485 // sympathetic nervous system development // inferred from electronic annotation /// 0048678 // response to axon injury // inferred from electronic annotation /// 0050679 // positive regulation of epithelial cell proliferation // inferred from direct assay /// 0060056 // mammary gland involution // inferred from electronic annotation /// 0060209 // estrus // inferred from electronic annotation /// 0070372 // regulation of ERK1 and ERK2 cascade // inferred from mutant phenotype","0005576 // extracellular region // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // non-traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005902 // microvillus // inferred from electronic annotation /// 0009925 // basal plasma membrane // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from direct assay /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0043219 // lateral loop // inferred from electronic annotation /// 0043235 // receptor complex // inferred from direct assay /// 0043235 // receptor complex // traceable author statement /// 0045121 // membrane raft // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0001042 // RNA polymerase I core binding // inferred from direct assay /// 0001948 // glycoprotein binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from genetic interaction /// 0004713 // protein tyrosine kinase activity // traceable author statement /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from direct assay /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004715 // non-membrane spanning protein tyrosine kinase activity // inferred from direct assay /// 0004716 // receptor signaling protein tyrosine kinase activity // inferred from electronic annotation /// 0004716 // receptor signaling protein tyrosine kinase activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from direct assay /// 0005006 // epidermal growth factor-activated receptor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019838 // growth factor binding // inferred from direct assay /// 0019903 // protein phosphatase binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0043125 // ErbB-3 class receptor binding // traceable author statement /// 0046982 // protein heterodimerization activity // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from physical interaction /// 0046982 // protein heterodimerization activity // non-traceable author statement /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0046983 // protein dimerization activity // non-traceable author statement /// 0051879 // Hsp90 protein binding // inferred from electronic annotation","chr17:37856479-37868583 (+) // 99.77 // q12"]
["11752690_a_at",214.25372,226.10924,222.11664,229.30296,228.33553,230.87976,-0.08476734,-0.0070676804,-0.032770157,0.013167381,0.0070676804,0.023053646,0.41528413,0.07440017,-1.039554,-0.0559647,1.039554,"down","RBCK1",10616.0,"0000209 // protein polyubiquitination // inferred from direct assay /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0042346 // positive regulation of NF-kappaB import into nucleus // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from direct assay /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from electronic annotation /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from mutant phenotype /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0050852 // T cell receptor signaling pathway // inferred from direct assay /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0097039 // protein linear polyubiquitination // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0071797 // LUBAC complex // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0005080 // protein kinase C binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0043130 // ubiquitin binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr20:388947-411115 (+) // 100.0 // p13"]
["11719725_at",445.55316,429.90475,453.038,438.95502,417.37384,428.98727,0.03655243,-0.015028,0.06058693,0.015028,-0.057704926,-0.018110275,0.58133227,0.1951534,1.0335677,0.047632843,1.0335677,"up","KIAA0020",9933.0,"","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay","0003723 // RNA binding // inferred from electronic annotation","chr9:2804162-2844224 (-) // 95.8 // p24.2"]
["11723300_at",95.23888,99.45862,100.04664,94.179375,95.73671,90.74715,-0.0037603378,0.05878496,0.06728983,-0.019899845,0.0037608147,-0.07345867,0.4447723,0.091838434,1.0501806,0.07063739,1.0501806,"up","RPS6KB1",6198.0,"0000082 // G1/S transition of mitotic cell cycle // inferred from mutant phenotype /// 0003009 // skeletal muscle contraction // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007281 // germ cell development // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0007584 // response to nutrient // inferred from electronic annotation /// 0007616 // long-term memory // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0009408 // response to heat // inferred from electronic annotation /// 0009611 // response to wounding // inferred from electronic annotation /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0009636 // response to toxin // inferred from electronic annotation /// 0009749 // response to glucose stimulus // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0014732 // skeletal muscle atrophy // inferred from electronic annotation /// 0014878 // response to electrical stimulus involved in regulation of muscle adaptation // inferred from electronic annotation /// 0014911 // positive regulation of smooth muscle cell migration // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016477 // cell migration // inferred from electronic annotation /// 0031929 // TOR signaling cascade // inferred from direct assay /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0032868 // response to insulin stimulus // inferred from electronic annotation /// 0032870 // cellular response to hormone stimulus // inferred from electronic annotation /// 0033574 // response to testosterone stimulus // inferred from electronic annotation /// 0033762 // response to glucagon stimulus // inferred from electronic annotation /// 0034612 // response to tumor necrosis factor // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043200 // response to amino acid stimulus // inferred from electronic annotation /// 0043201 // response to leucine // inferred from electronic annotation /// 0043434 // response to peptide hormone stimulus // inferred from electronic annotation /// 0045471 // response to ethanol // inferred from electronic annotation /// 0045727 // positive regulation of translation // inferred from mutant phenotype /// 0045931 // positive regulation of mitotic cell cycle // inferred from mutant phenotype /// 0045948 // positive regulation of translational initiation // inferred from mutant phenotype /// 0046324 // regulation of glucose import // inferred from electronic annotation /// 0046627 // negative regulation of insulin receptor signaling pathway // inferred from mutant phenotype /// 0046627 // negative regulation of insulin receptor signaling pathway // inferred from electronic annotation /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0048633 // positive regulation of skeletal muscle tissue growth // inferred from electronic annotation /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from electronic annotation /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation /// 0071363 // cellular response to growth factor stimulus // inferred from direct assay","0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004711 // ribosomal protein S6 kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0042277 // peptide binding // inferred from electronic annotation","chr17:57970442-58027923 (+) // 98.94 // q23.1"]
["11759621_at",32.61203,28.907608,26.187351,30.064754,28.92612,29.734941,0.15313816,-0.020816803,-0.16339588,0.035807133,-0.01989317,0.01989317,0.941189,0.8223531,-1.0155729,-0.02229381,1.0155729,"down","TCL6",27004.0,"","","","chr14:96131202-96136751 (+) // 60.7 // q32.13"]
["11749853_a_at",10.278151,11.688343,10.784811,9.59395,11.42217,10.88064,-0.07580137,0.10968828,-0.0063812733,-0.1751852,0.07645464,0.0063812733,0.88706934,0.6879614,1.0280794,0.039951675,1.0280794,"up","DTNB",1838.0,"","0005737 // cytoplasm // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:25655753-25861963 (-) // 87.22 // p23.3"]
["11722119_at",20.979658,18.882175,20.730965,20.47563,21.139673,17.187834,0.02614355,-0.12582254,0.008939743,-0.008939743,0.03710556,-0.26145983,0.88053143,0.67290604,1.0334855,0.04751819,1.0334855,"up","LZTS1",11178.0,"0006351 // transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006383 // transcription from RNA polymerase III promoter // traceable author statement /// 0006385 // transcription elongation from RNA polymerase III promoter // traceable author statement /// 0006386 // termination of RNA polymerase III transcription // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016242 // negative regulation of macroautophagy // inferred from mutant phenotype /// 0048814 // regulation of dendrite morphogenesis // inferred from electronic annotation","0005634 // nucleus // non-traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0003677 // DNA binding // non-traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr8:20103680-20161462 (-) // 93.11 // p21.3"]
["11740738_x_at",36.305027,36.751526,34.97339,33.25653,32.690475,34.202385,0.069992065,0.087626934,0.01608038,-0.056539536,-0.081306934,-0.01608038,0.253288,0.019049801,1.0786365,0.10920879,1.0786365,"up","ECE2",9718.0,"0006508 // proteolysis // inferred from electronic annotation /// 0007267 // cell-cell signaling // traceable author statement /// 0007420 // brain development // inferred from sequence or structural similarity /// 0007507 // heart development // inferred from sequence or structural similarity /// 0008152 // metabolic process // inferred from electronic annotation /// 0010002 // cardioblast differentiation // inferred from sequence or structural similarity /// 0016486 // peptide hormone processing // inferred from direct assay /// 0032259 // methylation // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from direct assay","0003824 // catalytic activity // inferred from electronic annotation /// 0004222 // metalloendopeptidase activity // inferred from direct assay /// 0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:183993798-184010818 (+) // 96.15 // q27.1"]
["11720995_at",11.177861,10.543383,8.681573,8.676468,8.823488,9.475154,0.2898233,0.20551682,-0.07479262,-0.075641155,-0.051399946,0.051400185,0.61574125,0.22997896,1.121474,0.16539621,1.121474,"up","ADCY2",108.0,"0006112 // energy reserve metabolic process // traceable author statement /// 0006171 // cAMP biosynthetic process // inferred from sequence or structural similarity /// 0006171 // cAMP biosynthetic process // non-traceable author statement /// 0006171 // cAMP biosynthetic process // inferred from electronic annotation /// 0006833 // water transport // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007188 // adenylate cyclase-modulating G-protein coupled receptor signaling pathway // inferred from sequence or structural similarity /// 0007189 // adenylate cyclase-activating G-protein coupled receptor signaling pathway // traceable author statement /// 0007193 // adenylate cyclase-inhibiting G-protein coupled receptor signaling pathway // traceable author statement /// 0007202 // activation of phospholipase C activity // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0009190 // cyclic nucleotide biosynthetic process // inferred from electronic annotation /// 0034199 // activation of protein kinase A activity // traceable author statement /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0071377 // cellular response to glucagon stimulus // traceable author statement","0005622 // intracellular // inferred from sequence or structural similarity /// 0005622 // intracellular // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030425 // dendrite // inferred from sequence or structural similarity /// 0030425 // dendrite // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0045121 // membrane raft // inferred from sequence or structural similarity","0000166 // nucleotide binding // inferred from electronic annotation /// 0004016 // adenylate cyclase activity // inferred from sequence or structural similarity /// 0004016 // adenylate cyclase activity // non-traceable author statement /// 0004016 // adenylate cyclase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008179 // adenylate cyclase binding // inferred from sequence or structural similarity /// 0008294 // calcium- and calmodulin-responsive adenylate cyclase activity // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0016849 // phosphorus-oxygen lyase activity // inferred from electronic annotation /// 0031683 // G-protein beta/gamma-subunit complex binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from sequence or structural similarity","chr5:7396320-7830194 (+) // 87.29 // p15.31"]
["11728820_a_at",295.1347,303.5406,333.52054,282.94778,321.04178,290.2907,-0.02025795,0.02025795,0.15614414,-0.081095695,0.10112953,-0.044133186,0.7877809,0.47915974,1.0425245,0.06008123,1.0425245,"up","HAUS2",55142.0,"0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0051225 // spindle assembly // inferred from mutant phenotype /// 0051297 // centrosome organization // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0070652 // HAUS complex // inferred from direct assay","","chr15:42841007-42862188 (+) // 46.98 // q15.2"]
["11745381_a_at",27.415054,27.362026,27.530703,29.76736,26.583876,28.42057,-0.003036499,-0.005829811,0.003036499,0.11572647,-0.047453403,0.048930645,0.7619903,0.43604448,-1.0288347,-0.041011207,1.0288347,"down","COBLL1",22837.0,"","","0003779 // actin binding // inferred from electronic annotation","chr2:165599744-165698650 (-) // 96.76 // q24.3"]
["11752491_x_at",94.17866,109.987564,91.89312,112.87036,99.06944,130.31935,-0.14845419,0.07541418,-0.1838975,0.11274004,-0.07541418,0.3201251,0.6048411,0.21770206,-1.1525235,-0.20479618,1.1525235,"down","TOM1",10043.0,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006897 // endocytosis // non-traceable author statement /// 0015031 // protein transport // non-traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016197 // endosomal transport // non-traceable author statement /// 0016197 // endosomal transport // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005764 // lysosome // traceable author statement /// 0005768 // endosome // traceable author statement /// 0005769 // early endosome // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr22:35695886-35743621 (+) // 98.88 // q12.3"]
["11738144_a_at",49.042225,47.99622,45.878635,54.263382,48.765118,56.23749,0.004087448,-0.027016163,-0.09211445,0.15004206,-0.004087448,0.20159483,0.43546602,0.08588541,-1.1128025,-0.15419757,1.1128025,"down","SSX2IP",117178.0,"0007155 // cell adhesion // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005912 // adherens junction // inferred from electronic annotation /// 0005913 // cell-cell adherens junction // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from electronic annotation","chr1:85109598-85156180 (-) // 91.25 // p22.3"]
["11744106_x_at",70.54069,78.33256,67.854225,78.32609,73.91759,80.04067,-0.10924959,0.041906834,-0.16526699,0.041787624,-0.041787624,0.07302809,0.60917073,0.22318554,-1.0731704,-0.1018792,1.0731704,"down","ATP9B",374868.0,"0006812 // cation transport // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0015914 // phospholipid transport // inferred from electronic annotation /// 0015917 // aminophospholipid transport // non-traceable author statement /// 0045332 // phospholipid translocation // non-traceable author statement /// 0072600 // establishment of protein localization in Golgi // inferred from mutant phenotype","0005794 // Golgi apparatus // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004012 // phospholipid-translocating ATPase activity // inferred from electronic annotation /// 0005524 // ATP binding // non-traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0015247 // aminophospholipid transporter activity // non-traceable author statement /// 0015662 // ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016820 // hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances // inferred from electronic annotation /// 0019829 // cation-transporting ATPase activity // non-traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation","chr18:76829391-77138280 (+) // 99.27 // q23"]
["11736447_at",480.14288,507.1052,487.27606,499.99298,462.14978,500.46683,-0.03985977,0.03896141,-0.018584251,0.018584251,-0.094963074,0.019950867,0.93202794,0.7968788,1.0085727,0.012315077,1.0085727,"up","TMPO",7112.0,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0000785 // chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005635 // nuclear envelope // traceable author statement /// 0005637 // nuclear inner membrane // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005521 // lamin binding // traceable author statement","chr12:98909407-98928706 (+) // 97.94 // q23.1"]
["11751175_a_at",9.166773,10.128703,9.984088,7.995554,9.613418,8.40517,-0.03431773,0.10964584,0.088899374,-0.23153353,0.03431797,-0.15945435,0.5038097,0.12970205,1.1278948,0.17363246,1.1278948,"up","SORCS3",22986.0,"0007218 // neuropeptide signaling pathway // non-traceable author statement /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0008188 // neuropeptide receptor activity // non-traceable author statement","chr10:106937524-107007093 (+) // 96.41 // q25.1"]
["11748470_a_at",85.445015,79.392334,69.51239,87.76374,91.853065,91.70734,-0.01931429,-0.12531042,-0.31704044,0.01931429,0.085017204,0.08272648,0.4138594,0.07359735,-1.1617029,-0.21624112,1.1617029,"down","MTA2",9219.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006333 // chromatin assembly or disassembly // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016575 // histone deacetylation // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0000118 // histone deacetylase complex // traceable author statement /// 0000118 // histone deacetylase complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0016581 // NuRD complex // inferred from direct assay /// 0016581 // NuRD complex // inferred from electronic annotation /// 0016585 // chromatin remodeling complex // inferred from electronic annotation","0000989 // transcription factor binding transcription factor activity // inferred from electronic annotation /// 0001085 // RNA polymerase II transcription factor binding // inferred from physical interaction /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0004407 // histone deacetylase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:62361313-62368764 (-) // 95.88 // q12.3"]
["11755982_a_at",377.3741,391.03,388.08075,371.48593,353.4968,368.75256,0.011343956,0.06262779,0.05170536,-0.011343956,-0.08295441,-0.021998405,0.337431,0.041418042,1.0575002,0.080657996,1.0575002,"up","TNPO3",23534.0,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0035048 // splicing factor protein import into nucleus // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0004872 // receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr7:128595160-128622380 (-) // 93.94 // q32.1"]
["11729632_a_at",1259.1279,1242.517,1256.2074,1162.2225,1197.2073,1180.1799,0.045955658,0.026796341,0.0426054,-0.06958294,-0.026796341,-0.047462463,0.13303706,0.00322661,1.0617173,0.08639964,1.0617173,"up","CSDA",8531.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0008584 // male gonad development // inferred from electronic annotation /// 0009409 // response to cold // traceable author statement /// 0009566 // fertilization // inferred from electronic annotation /// 0031100 // organ regeneration // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0046622 // positive regulation of organ growth // inferred from electronic annotation /// 0048642 // negative regulation of skeletal muscle tissue development // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005844 // polysome // inferred from electronic annotation /// 0005921 // gap junction // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // traceable author statement /// 0003697 // single-stranded DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003714 // transcription corepressor activity // traceable author statement /// 0003730 // mRNA 3'-UTR binding // inferred from electronic annotation","chr12:10851685-10876047 (-) // 90.76 // p13.2"]
["11729135_a_at",392.16226,405.82095,412.70737,405.62625,375.60834,390.0441,-0.024350166,0.025042534,0.049318314,0.024350166,-0.08657169,-0.03216362,0.65583366,0.2811706,1.0339253,0.04813195,1.0339253,"up","STK24",8428.0,"0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from mutant phenotype /// 0006921 // cellular component disassembly involved in apoptotic process // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0008631 // induction of apoptosis by oxidative stress // inferred from mutant phenotype /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // inferred from mutant phenotype /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0048679 // regulation of axon regeneration // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr13:99102454-99229400 (-) // 95.03 // q32.2"]
["11759487_at",14.510713,11.904219,10.355667,11.366435,11.561592,11.415788,0.33693314,0.05128789,-0.14976478,-0.0154054165,0.009154797,-0.009154797,0.8381881,0.5817682,1.0604088,0.08462059,1.0604088,"up","ARHGEF40",55701.0,"0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation","chr14:21538526-21558407 (+) // 96.76 // q11.2"]
["11743084_s_at",1170.1936,1202.903,1133.7605,996.85297,1002.54944,1013.04047,0.12684345,0.16661644,0.081212044,-0.10445118,-0.09623051,-0.081212044,0.091060214,0.0010268355,1.1638098,0.21885526,1.1638098,"up","BNIP3",664.0,"0001666 // response to hypoxia // inferred from sequence or structural similarity /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0006309 // apoptotic DNA fragmentation // inferred from direct assay /// 0006338 // chromatin remodeling // inferred from direct assay /// 0006915 // apoptotic process // inferred from direct assay /// 0006915 // apoptotic process // inferred from physical interaction /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // traceable author statement /// 0006917 // induction of apoptosis // inferred from direct assay /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0008219 // cell death // inferred from direct assay /// 0008219 // cell death // inferred from sequence or structural similarity /// 0008219 // cell death // inferred from electronic annotation /// 0008629 // induction of apoptosis by intracellular signals // inferred from electronic annotation /// 0008634 // negative regulation of survival gene product expression // inferred from direct assay /// 0010637 // negative regulation of mitochondrial fusion // inferred from direct assay /// 0035694 // mitochondrial protein catabolic process // inferred from mutant phenotype /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043243 // positive regulation of protein complex disassembly // inferred from direct assay /// 0043653 // mitochondrial fragmentation involved in apoptotic process // inferred from direct assay /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045837 // negative regulation of membrane potential // inferred from direct assay /// 0046902 // regulation of mitochondrial membrane permeability // inferred from direct assay /// 0048102 // autophagic cell death // inferred from electronic annotation /// 0050873 // brown fat cell differentiation // inferred from electronic annotation /// 0051402 // neuron apoptotic process // inferred from sequence or structural similarity /// 0051402 // neuron apoptotic process // inferred from electronic annotation /// 0051607 // defense response to virus // inferred from direct assay /// 0055093 // response to hyperoxia // inferred from electronic annotation /// 0070301 // cellular response to hydrogen peroxide // inferred from electronic annotation /// 0071260 // cellular response to mechanical stimulus // inferred from expression pattern /// 0071279 // cellular response to cobalt ion // inferred from mutant phenotype /// 0071456 // cellular response to hypoxia // inferred from mutant phenotype /// 0072593 // reactive oxygen species metabolic process // inferred from direct assay /// 0090141 // positive regulation of mitochondrial fission // inferred from direct assay /// 0090200 // positive regulation of release of cytochrome c from mitochondria // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from direct assay /// 0005654 // nucleoplasm // inferred from sequence or structural similarity /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005740 // mitochondrial envelope // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030425 // dendrite // inferred from sequence or structural similarity /// 0030425 // dendrite // inferred from electronic annotation /// 0031307 // integral to mitochondrial outer membrane // inferred from direct assay /// 0031966 // mitochondrial membrane // inferred from direct assay /// 0031966 // mitochondrial membrane // inferred from mutant phenotype /// 0031966 // mitochondrial membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from direct assay /// 0051020 // GTPase binding // inferred from physical interaction","chr10:133781190-133795488 (-) // 97.05 // q26.3"]
["11727560_a_at",12.631927,12.722389,13.635887,13.157,13.229626,14.364007,-0.062726736,-0.05243182,0.047606945,-0.0039708614,0.0039708614,0.12265682,0.67482585,0.3054101,-1.0449275,-0.06340282,1.0449275,"down","FKBP7",51661.0,"0000413 // protein peptidyl-prolyl isomerization // not recorded /// 0000413 // protein peptidyl-prolyl isomerization // inferred from electronic annotation /// 0006457 // protein folding // inferred from electronic annotation /// 0018208 // peptidyl-proline modification // not recorded","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // inferred from electronic annotation /// 0016020 // membrane // not recorded","0003755 // peptidyl-prolyl cis-trans isomerase activity // not recorded /// 0003755 // peptidyl-prolyl cis-trans isomerase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005528 // FK506 binding // not recorded /// 0016853 // isomerase activity // inferred from electronic annotation","chr2:179328314-179343356 (-) // 86.67 // q31.2"]
["11724663_at",60.207405,56.404842,53.20129,51.383213,59.391293,67.23648,0.056905746,-0.037216187,-0.121573925,-0.17173815,0.037216187,0.21620941,0.8685741,0.64595747,-1.0433264,-0.061190538,1.0433264,"down","TMEM120B",144404.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr12:122150657-122219965 (+) // 71.93 // q24.31"]
["11723089_s_at",246.59816,236.47186,249.37408,260.72382,250.92514,278.4409,-0.020622253,-0.08111572,-0.0044727325,0.05973816,0.0044727325,0.15458679,0.44868562,0.094551444,-1.0779843,-0.10833621,1.0779843,"down","CXorf40A /// CXorf40B","541578 /// 91966","","","0005515 // protein binding // inferred from physical interaction","chrX:148622518-148629312 (+) // 98.57 // q28"]
["11723123_at",29.620049,31.151419,24.920156,26.862362,28.714405,26.6802,0.0928936,0.16561747,-0.1563673,-0.048094273,0.048094273,-0.05791092,0.86232567,0.63242453,1.0376728,0.053351544,1.0376728,"up","SH3PXD2B",285590.0,"0001501 // skeletal system development // inferred from mutant phenotype /// 0001501 // skeletal system development // inferred from electronic annotation /// 0001654 // eye development // inferred from mutant phenotype /// 0001654 // eye development // inferred from electronic annotation /// 0006801 // superoxide metabolic process // inferred from direct assay /// 0007154 // cell communication // inferred from electronic annotation /// 0007507 // heart development // inferred from mutant phenotype /// 0007507 // heart development // inferred from electronic annotation /// 0022617 // extracellular matrix disassembly // inferred from mutant phenotype /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045600 // positive regulation of fat cell differentiation // inferred from electronic annotation /// 0060348 // bone development // inferred from mutant phenotype /// 0060348 // bone development // inferred from electronic annotation /// 0060612 // adipose tissue development // inferred from sequence or structural similarity /// 0060612 // adipose tissue development // inferred from electronic annotation /// 0071800 // podosome assembly // inferred from sequence or structural similarity /// 0071800 // podosome assembly // inferred from electronic annotation /// 0072657 // protein localization in membrane // inferred from direct assay","0002102 // podosome // inferred from sequence or structural similarity /// 0002102 // podosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0010314 // phosphatidylinositol-5-phosphate binding // inferred from sequence or structural similarity /// 0010314 // phosphatidylinositol-5-phosphate binding // inferred from electronic annotation /// 0032266 // phosphatidylinositol-3-phosphate binding // inferred from sequence or structural similarity /// 0032266 // phosphatidylinositol-3-phosphate binding // inferred from electronic annotation /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation /// 0042169 // SH2 domain binding // inferred from sequence or structural similarity /// 0042169 // SH2 domain binding // inferred from electronic annotation /// 0070273 // phosphatidylinositol-4-phosphate binding // inferred from electronic annotation /// 0080025 // phosphatidylinositol-3,5-bisphosphate binding // inferred from sequence or structural similarity /// 0080025 // phosphatidylinositol-3,5-bisphosphate binding // inferred from electronic annotation","chr5:171760502-171881527 (-) // 91.29 // q35.1"]
["11728821_a_at",5.891514,6.5472817,5.9791656,6.1594715,6.9810123,5.437395,-0.042737007,0.109520674,-0.021431208,0.021431208,0.20206094,-0.15845966,0.9870311,0.95703834,-1.0045574,-0.00655996,1.0045574,"down","HEPACAM2",253012.0,"","0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr7:92817898-92855837 (-) // 98.58 // q21.3"]
["11715351_at",35.928436,36.30067,38.669205,37.84955,37.57704,36.26146,-0.039797783,-0.024927616,0.06626129,0.03535223,0.024927616,-0.026486874,0.93036366,0.79266936,-1.0074809,-0.01075243,1.0074809,"down","COL1A1",1277.0,"0001501 // skeletal system development // inferred from mutant phenotype /// 0001501 // skeletal system development // inferred from electronic annotation /// 0001503 // ossification // inferred from electronic annotation /// 0001568 // blood vessel development // inferred from mutant phenotype /// 0001568 // blood vessel development // inferred from electronic annotation /// 0001649 // osteoblast differentiation // inferred from electronic annotation /// 0001957 // intramembranous ossification // inferred from electronic annotation /// 0001958 // endochondral ossification // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007584 // response to nutrient // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0007601 // visual perception // inferred from mutant phenotype /// 0007605 // sensory perception of sound // inferred from mutant phenotype /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0010035 // response to inorganic substance // inferred from electronic annotation /// 0010718 // positive regulation of epithelial to mesenchymal transition // inferred from direct assay /// 0010812 // negative regulation of cell-substrate adhesion // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0030199 // collagen fibril organization // inferred from mutant phenotype /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0031960 // response to corticosteroid stimulus // inferred from electronic annotation /// 0032964 // collagen biosynthetic process // inferred from mutant phenotype /// 0034504 // protein localization to nucleus // inferred from direct assay /// 0034505 // tooth mineralization // inferred from mutant phenotype /// 0042542 // response to hydrogen peroxide // inferred from electronic annotation /// 0043434 // response to peptide hormone stimulus // inferred from electronic annotation /// 0043588 // skin development // inferred from electronic annotation /// 0043589 // skin morphogenesis // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0048705 // skeletal system morphogenesis // inferred from electronic annotation /// 0048706 // embryonic skeletal system development // inferred from mutant phenotype /// 0050900 // leukocyte migration // traceable author statement /// 0051591 // response to cAMP // inferred from electronic annotation /// 0060325 // face morphogenesis // inferred from electronic annotation /// 0060346 // bone trabecula formation // inferred from electronic annotation /// 0060351 // cartilage development involved in endochondral bone morphogenesis // inferred from electronic annotation /// 0070208 // protein heterotrimerization // inferred from electronic annotation /// 0071230 // cellular response to amino acid stimulus // inferred from electronic annotation /// 0071260 // cellular response to mechanical stimulus // inferred from electronic annotation /// 0071300 // cellular response to retinoic acid // inferred from electronic annotation /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation /// 0090263 // positive regulation of canonical Wnt receptor signaling pathway // inferred from direct assay","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005581 // collagen // inferred from electronic annotation /// 0005584 // collagen type I // inferred from mutant phenotype /// 0005584 // collagen type I // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from sequence or structural similarity /// 0031012 // extracellular matrix // inferred from electronic annotation","0005201 // extracellular matrix structural constituent // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from direct assay /// 0048407 // platelet-derived growth factor binding // inferred from direct assay","chr17:48260649-48279005 (-) // 87.66 // q21.33"]
["11729376_x_at",7.952783,7.6495795,7.8923707,8.645274,6.4480014,8.072017,0.005500555,-0.050578833,-0.0055003166,0.12595272,-0.29710698,0.026970148,0.94048727,0.8206438,1.021863,0.031201765,1.021863,"up","TAC3",6866.0,"0007217 // tachykinin receptor signaling pathway // inferred from electronic annotation /// 0007217 // tachykinin receptor signaling pathway // traceable author statement /// 0007218 // neuropeptide signaling pathway // inferred from electronic annotation /// 0007565 // female pregnancy // traceable author statement /// 0043278 // response to morphine // inferred from electronic annotation /// 0045777 // positive regulation of blood pressure // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0005625 // soluble fraction // traceable author statement","0005102 // receptor binding // traceable author statement","chr12:57403783-57410318 (-) // 89.79 // q13.3"]
["11756341_a_at",381.52505,375.96307,388.0333,372.77466,360.25082,374.39816,0.024195671,0.0030088425,0.04859829,-0.009278297,-0.0585804,-0.0030088425,0.44143656,0.08998532,1.0344688,0.04889009,1.0344688,"up","RBM23",55147.0,"0006397 // mRNA processing // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation","chr14:23369907-23388361 (-) // 96.22 // q11.2"]
["11729406_a_at",511.8565,513.3508,523.3739,551.4481,548.2377,572.254,-0.065582275,-0.06137657,-0.03347969,0.041903496,0.03347969,0.09533405,0.17673707,0.0071982965,-1.0795164,-0.11038517,1.0795164,"down","IFNGR1",3459.0,"0007165 // signal transduction // traceable author statement /// 0009615 // response to virus // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060334 // regulation of interferon-gamma-mediated signaling pathway // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004906 // interferon-gamma receptor activity // traceable author statement /// 0019955 // cytokine binding // inferred from electronic annotation","chr6:137518620-137540567 (-) // 98.65 // q23.3"]
["11748406_a_at",171.36096,176.15504,181.58783,177.34726,185.374,175.63129,-0.044672966,-0.004866123,0.03895569,0.0048656464,0.06872749,-0.009161472,0.79968286,0.5031775,-1.0174832,-0.025005022,1.0174832,"down","SCAF8",22828.0,"0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0016363 // nuclear matrix // inferred from sequence or structural similarity /// 0016363 // nuclear matrix // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0043175 // RNA polymerase core enzyme binding // inferred from physical interaction /// 0070063 // RNA polymerase binding // inferred from electronic annotation","chr6:155054549-155155131 (+) // 98.89 // q25.2"]
["11723489_at",35.73459,37.23645,36.39451,35.571594,34.38386,37.345222,-0.013199806,0.046194553,0.013199806,-0.019795418,-0.06878948,0.05040264,0.80128497,0.5068043,1.0196865,0.028125612,1.0196865,"up","GCLM",2730.0,"0000096 // sulfur amino acid metabolic process // traceable author statement /// 0006534 // cysteine metabolic process // inferred from electronic annotation /// 0006536 // glutamate metabolic process // inferred from direct assay /// 0006749 // glutathione metabolic process // inferred from electronic annotation /// 0006750 // glutathione biosynthetic process // inferred from direct assay /// 0006750 // glutathione biosynthetic process // inferred from electronic annotation /// 0006750 // glutathione biosynthetic process // inferred from mutant phenotype /// 0006750 // glutathione biosynthetic process // traceable author statement /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0006979 // response to oxidative stress // inferred from direct assay /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0035229 // positive regulation of glutamate-cysteine ligase activity // inferred from electronic annotation /// 0042493 // response to drug // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0050880 // regulation of blood vessel size // inferred from mutant phenotype /// 0051409 // response to nitrosative stress // inferred from electronic annotation /// 0051900 // regulation of mitochondrial depolarization // inferred from electronic annotation","0005625 // soluble fraction // inferred from direct assay /// 0005829 // cytosol // non-traceable author statement /// 0005829 // cytosol // traceable author statement /// 0017109 // glutamate-cysteine ligase complex // inferred from electronic annotation","0004357 // glutamate-cysteine ligase activity // inferred from direct assay /// 0004357 // glutamate-cysteine ligase activity // inferred from mutant phenotype /// 0035226 // glutamate-cysteine ligase catalytic subunit binding // inferred from physical interaction /// 0035226 // glutamate-cysteine ligase catalytic subunit binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr1:94352059-94375320 (-) // 84.58 // p22.1"]
["11725191_s_at",1141.8413,1113.6788,1121.3801,1111.374,1187.2166,1132.1622,0.019184113,-0.01684475,-0.0069026947,-0.019833565,0.07540512,0.0069026947,0.7993054,0.50210845,-1.0156095,-0.022345798,1.0156095,"down","GPR126",57211.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007218 // neuropeptide signaling pathway // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement","chr6:142623055-142767401 (+) // 99.03 // q24.1"]
["11725062_at",30.191988,33.657486,33.464607,27.824457,30.646059,30.194841,-0.010836124,0.14592552,0.13763428,-0.12864828,0.010699749,-0.010699749,0.48594528,0.115992025,1.0971727,0.13379067,1.0971727,"up","USP7",7874.0,"0006281 // DNA repair // inferred from electronic annotation /// 0006283 // transcription-coupled nucleotide-excision repair // inferred from mutant phenotype /// 0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0016579 // protein deubiquitination // inferred from direct assay /// 0016579 // protein deubiquitination // inferred from mutant phenotype /// 0031647 // regulation of protein stability // inferred from electronic annotation /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0016605 // PML body // inferred from electronic annotation","0002039 // p53 binding // inferred from direct assay /// 0004197 // cysteine-type endopeptidase activity // traceable author statement /// 0004221 // ubiquitin thiolesterase activity // inferred from mutant phenotype /// 0004221 // ubiquitin thiolesterase activity // inferred from electronic annotation /// 0004843 // ubiquitin-specific protease activity // inferred from direct assay /// 0004843 // ubiquitin-specific protease activity // inferred from mutant phenotype /// 0004843 // ubiquitin-specific protease activity // inferred from electronic annotation /// 0004843 // ubiquitin-specific protease activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from electronic annotation","chr16:8985953-9057341 (-) // 95.32 // p13.2"]
["11746819_a_at",67.16229,67.16229,73.518776,60.91726,53.08584,61.54585,0.06299496,0.06299496,0.19345617,-0.07780552,-0.27632952,-0.06299496,0.33095396,0.03926547,1.1855243,0.24552529,1.1855243,"up","FGB",2244.0,"0002576 // platelet degranulation // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0007596 // blood coagulation // inferred from electronic annotation /// 0007599 // hemostasis // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0030168 // platelet activation // inferred from electronic annotation /// 0051258 // protein polymerization // inferred from electronic annotation /// 0051592 // response to calcium ion // inferred from direct assay","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005577 // fibrinogen complex // inferred from electronic annotation /// 0005577 // fibrinogen complex // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005625 // soluble fraction // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005938 // cell cortex // inferred from electronic annotation /// 0009897 // external side of plasma membrane // inferred from direct assay /// 0031091 // platelet alpha granule // inferred from direct assay /// 0031093 // platelet alpha granule lumen // traceable author statement","0005102 // receptor binding // inferred from electronic annotation /// 0030674 // protein binding, bridging // inferred from electronic annotation /// 0043499 // eukaryotic cell surface binding // inferred from direct assay /// 0051087 // chaperone binding // inferred from physical interaction","chr4:155484162-155492138 (+) // 96.95 // q31.3"]
["11741119_a_at",60.207447,51.704273,55.78003,56.40253,53.50999,59.017715,0.10218811,-0.117470264,-0.008005619,0.008006096,-0.06794548,0.07339382,0.96033305,0.87887764,-1.0085254,-0.012247378,1.0085254,"down","ANKRD5",63926.0,"","","0005509 // calcium ion binding // inferred from electronic annotation","chr20:10015471-10037405 (+) // 82.95 // p12.2"]
["11747355_a_at",913.9865,927.02924,937.73804,860.0176,838.8987,850.4785,0.04390335,0.06434536,0.08091545,-0.04390335,-0.07977295,-0.059994698,0.09474098,0.0011308443,1.0899624,0.124278314,1.0899624,"up","FSCN1 /// LOC100653350","100653350 /// 6624","0008283 // cell proliferation // traceable author statement /// 0016477 // cell migration // inferred from mutant phenotype /// 0016477 // cell migration // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from direct assay /// 0030036 // actin cytoskeleton organization // traceable author statement /// 0048870 // cell motility // inferred from direct assay /// 0051017 // actin filament bundle assembly // inferred from direct assay /// 0051017 // actin filament bundle assembly // inferred from electronic annotation /// 0051017 // actin filament bundle assembly // traceable author statement","0001725 // stress fiber // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0015629 // actin cytoskeleton // traceable author statement /// 0030054 // cell junction // inferred from electronic annotation /// 0030175 // filopodium // inferred from direct assay /// 0030175 // filopodium // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0071437 // invadopodium // inferred from direct assay /// 0071437 // invadopodium // inferred from electronic annotation","0003779 // actin binding // inferred from direct assay /// 0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008144 // drug binding // inferred from direct assay /// 0008144 // drug binding // inferred from electronic annotation /// 0030674 // protein binding, bridging // inferred from electronic annotation /// 0051015 // actin filament binding // inferred from direct assay /// 0051015 // actin filament binding // inferred from electronic annotation","chr7:5632455-5646279 (+) // 98.71 // p22.1"]
["11756802_a_at",17.391762,17.579735,17.366133,16.73805,14.429769,17.92461,0.0010638237,0.016572952,-0.0010638237,-0.054208755,-0.2682922,0.04460144,0.70664847,0.34849593,1.0704055,0.09815741,1.0704055,"up","RD3",343035.0,"0007601 // visual perception // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0060041 // retina development in camera-type eye // inferred from electronic annotation","","","chr1:211649883-211665373 (-) // 65.81 // q32.3"]
["11720880_s_at",263.2213,264.58902,277.15253,260.34372,283.04376,271.32202,-0.025603294,-0.018126488,0.04880047,-0.041461945,0.07914543,0.018126488,0.8955875,0.7083654,-1.0117923,-0.016913168,1.0117923,"down","EHD4",30844.0,"0006184 // GTP catabolic process // inferred from electronic annotation /// 0006907 // pinocytosis // inferred from electronic annotation /// 0030100 // regulation of endocytosis // inferred from electronic annotation /// 0032456 // endocytic recycling // inferred from genetic interaction /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0051260 // protein homooligomerization // inferred from physical interaction /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation","0005634 // nucleus // traceable author statement /// 0005768 // endosome // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from electronic annotation /// 0055038 // recycling endosome membrane // inferred from direct assay /// 0055038 // recycling endosome membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // traceable author statement /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation","chr15:42191637-42264776 (-) // 89.84 // q15.1"]
["11750173_x_at",79.74888,75.85726,81.23631,78.207344,72.50761,79.33402,0.01784277,-0.05433464,0.044502735,-0.010317802,-0.11948967,0.010317802,0.7655968,0.44266194,1.0298971,0.04250019,1.0298971,"up","CLTCL1",8218.0,"0006886 // intracellular protein transport // inferred from electronic annotation /// 0006898 // receptor-mediated endocytosis // inferred from direct assay /// 0006898 // receptor-mediated endocytosis // traceable author statement /// 0007067 // mitosis // inferred from direct assay /// 0007165 // signal transduction // traceable author statement /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0046326 // positive regulation of glucose import // inferred from mutant phenotype","0005622 // intracellular // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from direct assay /// 0005819 // spindle // inferred from direct assay /// 0005905 // coated pit // inferred from direct assay /// 0005905 // coated pit // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030130 // clathrin coat of trans-Golgi network vesicle // inferred from electronic annotation /// 0030132 // clathrin coat of coated pit // inferred from electronic annotation /// 0030135 // coated vesicle // inferred from direct assay /// 0030136 // clathrin-coated vesicle // inferred from direct assay /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0004871 // signal transducer activity // traceable author statement /// 0005198 // structural molecule activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr22:19167287-19195184 (-) // 93.4 // q11.21"]
["11720003_at",141.28935,141.60333,131.35883,132.61842,115.576866,128.47879,0.098255634,0.10145807,-0.006884098,0.006884098,-0.19154501,-0.038866997,0.48754758,0.11749704,1.1009781,0.13878582,1.1009781,"up","NRARP",441478.0,"0001569 // patterning of blood vessels // inferred from electronic annotation /// 0001938 // positive regulation of endothelial cell proliferation // inferred from electronic annotation /// 0002040 // sprouting angiogenesis // inferred from electronic annotation /// 0002043 // blood vessel endothelial cell proliferation involved in sprouting angiogenesis // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0022407 // regulation of cell-cell adhesion // inferred from electronic annotation /// 0045581 // negative regulation of T cell differentiation // inferred from electronic annotation /// 0045746 // negative regulation of Notch signaling pathway // inferred from mutant phenotype /// 0045746 // negative regulation of Notch signaling pathway // inferred from electronic annotation /// 0090263 // positive regulation of canonical Wnt receptor signaling pathway // inferred from mutant phenotype","","","chr9:140194093-140196723 (-) // 81.17 // q34.3"]
["11754246_x_at",3391.7065,3413.3865,3476.9165,3340.1829,3378.5398,3342.5552,0.0028047562,0.011997223,0.038601875,-0.01927948,-0.0028057098,-0.018255234,0.38389045,0.059570096,1.0218958,0.031248048,1.0218958,"up","PABPC1",26986.0,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // inferred from electronic annotation /// 0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0000289 // nuclear-transcribed mRNA poly(A) tail shortening // traceable author statement /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0006378 // mRNA polyadenylation // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045727 // positive regulation of translation // traceable author statement /// 0048255 // mRNA stabilization // traceable author statement /// 2000623 // negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0010494 // cytoplasmic stress granule // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0008143 // poly(A) RNA binding // inferred from direct assay /// 0008143 // poly(A) RNA binding // traceable author statement /// 0008494 // translation activator activity // traceable author statement","chr8:101715142-101734291 (-) // 96.44 // q22.3"]
["11761508_at",6.01407,6.01407,6.0929966,5.8173857,6.1857853,5.7475696,0.0,0.0,0.018810272,-0.04797077,0.04061508,-0.06538987,0.747516,0.41271728,1.0213792,0.03051863,1.0213792,"up","FGF7",2252.0,"0001541 // ovarian follicle development // inferred from electronic annotation /// 0006656 // phosphatidylcholine biosynthetic process // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from genetic interaction /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from genetic interaction /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0008544 // epidermis development // traceable author statement /// 0008654 // phospholipid biosynthetic process // inferred from electronic annotation /// 0009611 // response to wounding // traceable author statement /// 0010463 // mesenchymal cell proliferation // inferred from direct assay /// 0010838 // positive regulation of keratinocyte proliferation // inferred from direct assay /// 0030324 // lung development // inferred from electronic annotation /// 0031069 // hair follicle morphogenesis // inferred from electronic annotation /// 0031532 // actin cytoskeleton reorganization // inferred from direct assay /// 0034394 // protein localization at cell surface // inferred from direct assay /// 0042060 // wound healing // inferred from electronic annotation /// 0043129 // surfactant homeostasis // inferred from electronic annotation /// 0050679 // positive regulation of epithelial cell proliferation // inferred from direct assay /// 0050679 // positive regulation of epithelial cell proliferation // inferred from electronic annotation /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0050918 // positive chemotaxis // inferred from direct assay /// 0051549 // positive regulation of keratinocyte migration // inferred from direct assay /// 0051781 // positive regulation of cell division // inferred from electronic annotation /// 0060445 // branching involved in salivary gland morphogenesis // inferred from electronic annotation /// 0060501 // positive regulation of epithelial cell proliferation involved in lung morphogenesis // inferred from direct assay /// 0060665 // regulation of branching involved in salivary gland morphogenesis by mesenchymal-epithelial signaling // inferred from electronic annotation /// 0061033 // secretion by lung epithelial cell involved in lung growth // inferred from direct assay","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation","0005111 // type 2 fibroblast growth factor receptor binding // inferred from electronic annotation /// 0008083 // growth factor activity // inferred from electronic annotation /// 0008083 // growth factor activity // traceable author statement /// 0008201 // heparin binding // inferred from electronic annotation /// 0042056 // chemoattractant activity // inferred from direct assay","chr15:49715438-49717708 (+) // 93.41 // q21.2"]
["11738013_a_at",16.944801,15.797142,16.713594,16.828108,17.608532,17.521517,0.0049848557,-0.09619427,-0.0148358345,-0.0049848557,0.0604167,0.053269863,0.5003613,0.12699963,-1.0508686,-0.071582325,1.0508686,"down","CCDC7",221016.0,"","","","chr10:32735013-32863488 (+) // 92.45 // p11.22"]
["11723623_s_at",124.32195,125.89899,117.1055,135.92029,127.719475,139.7073,-0.028541565,-0.010356426,-0.114813805,0.10013771,0.010355949,0.13978481,0.3711624,0.054590445,-1.0978366,-0.13466336,1.0978366,"down","TRIM21",6737.0,"0000209 // protein polyubiquitination // inferred from direct assay /// 0006513 // protein monoubiquitination // inferred from direct assay /// 0007049 // cell cycle // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0031648 // protein destabilization // inferred from mutant phenotype /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0045787 // positive regulation of cell cycle // inferred from mutant phenotype /// 0051865 // protein autoubiquitination // inferred from direct assay /// 0070206 // protein trimerization // inferred from direct assay /// 0090086 // negative regulation of protein deubiquitination // inferred from mutant phenotype","0000932 // cytoplasmic mRNA processing body // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0019005 // SCF ubiquitin ligase complex // inferred from direct assay /// 0030529 // ribonucleoprotein complex // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:4406131-4411690 (-) // 92.27 // p15.4"]
["11723315_a_at",40.43926,35.104546,36.548927,34.65066,40.10389,35.588833,0.16512966,-0.03896904,0.019202232,-0.057744026,0.15311527,-0.019202232,0.93613476,0.80791247,1.0161157,0.023064634,1.0161157,"up","CAPN3",825.0,"0001896 // autolysis // inferred from electronic annotation /// 0006461 // protein complex assembly // inferred from electronic annotation /// 0006461 // protein complex assembly // inferred from sequence or structural similarity /// 0006508 // proteolysis // inferred from direct assay /// 0006508 // proteolysis // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007517 // muscle organ development // traceable author statement /// 0014718 // positive regulation of satellite cell activation involved in skeletal muscle regeneration // inferred from electronic annotation /// 0014718 // positive regulation of satellite cell activation involved in skeletal muscle regeneration // inferred from sequence or structural similarity /// 0014850 // response to muscle activity // inferred from sequence or structural similarity /// 0030239 // myofibril assembly // inferred from sequence or structural similarity /// 0030239 // myofibril assembly // traceable author statement /// 0030239 // myofibril assembly // inferred from electronic annotation /// 0033234 // negative regulation of protein sumoylation // inferred from direct assay /// 0042493 // response to drug // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043122 // regulation of I-kappaB kinase/NF-kappaB cascade // inferred from electronic annotation /// 0043122 // regulation of I-kappaB kinase/NF-kappaB cascade // inferred from mutant phenotype /// 0045214 // sarcomere organization // inferred from electronic annotation /// 0045214 // sarcomere organization // inferred from sequence or structural similarity /// 0045661 // regulation of myoblast differentiation // inferred from electronic annotation /// 0045862 // positive regulation of proteolysis // inferred from electronic annotation /// 0045862 // positive regulation of proteolysis // inferred from sequence or structural similarity /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0046716 // muscle cell homeostasis // traceable author statement /// 0050790 // regulation of catalytic activity // inferred from direct assay /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from electronic annotation /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from mutant phenotype /// 0051281 // positive regulation of release of sequestered calcium ion into cytosol // inferred from electronic annotation /// 0051281 // positive regulation of release of sequestered calcium ion into cytosol // inferred from sequence or structural similarity /// 0051592 // response to calcium ion // inferred from sequence or structural similarity /// 0051592 // response to calcium ion // inferred from electronic annotation /// 0061061 // muscle structure development // inferred from sequence or structural similarity /// 0061061 // muscle structure development // inferred from electronic annotation /// 0070315 // G1 to G0 transition involved in cell differentiation // inferred from electronic annotation /// 0071277 // cellular response to calcium ion // inferred from electronic annotation /// 0071277 // cellular response to calcium ion // inferred from sequence or structural similarity /// 0071472 // cellular response to salt stress // inferred from electronic annotation /// 0071472 // cellular response to salt stress // inferred from sequence or structural similarity /// 0072657 // protein localization in membrane // inferred from electronic annotation /// 0072657 // protein localization in membrane // inferred from sequence or structural similarity /// 0097264 // self proteolysis // inferred from direct assay","0005622 // intracellular // traceable author statement /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0030016 // myofibril // inferred from sequence or structural similarity /// 0030018 // Z disc // inferred from sequence or structural similarity /// 0030315 // T-tubule // inferred from sequence or structural similarity /// 0043234 // protein complex // inferred from electronic annotation /// 0043234 // protein complex // inferred from sequence or structural similarity","0003824 // catalytic activity // inferred from direct assay /// 0004198 // calcium-dependent cysteine-type endopeptidase activity // inferred from electronic annotation /// 0004198 // calcium-dependent cysteine-type endopeptidase activity // inferred from sequence or structural similarity /// 0004198 // calcium-dependent cysteine-type endopeptidase activity // traceable author statement /// 0004871 // signal transducer activity // traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from sequence or structural similarity /// 0008233 // peptidase activity // inferred from direct assay /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // traceable author statement /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0008307 // structural constituent of muscle // inferred from electronic annotation /// 0008307 // structural constituent of muscle // inferred from sequence or structural similarity /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0031402 // sodium ion binding // inferred from electronic annotation /// 0031402 // sodium ion binding // inferred from sequence or structural similarity /// 0031432 // titin binding // inferred from physical interaction /// 0032947 // protein complex scaffold // inferred from electronic annotation /// 0032947 // protein complex scaffold // inferred from sequence or structural similarity /// 0055103 // ligase regulator activity // inferred from direct assay","chr15:42694587-42704513 (+) // 96.51 // q15.1"]
["11749364_a_at",323.70703,318.81906,366.1015,363.11026,345.5797,351.54123,-0.10666752,-0.12861824,0.070887566,0.059051514,-0.012337685,0.012337685,0.6900268,0.32565856,-1.0529838,-0.074483186,1.0529838,"down","SAP30BP",29115.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0045111 // intermediate filament cytoskeleton // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr17:73663435-73702781 (+) // 95.45 // q25.1"]
["11733852_at",10.806559,11.205036,11.704754,9.681666,10.202109,9.087743,0.04151988,0.093759775,0.15670729,-0.117059946,-0.04151988,-0.20839334,0.25744495,0.019998305,1.1644537,0.21965332,1.1644537,"up","EGLN3",112399.0,"0001666 // response to hypoxia // inferred from expression pattern /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from expression pattern /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from expression pattern /// 0018126 // protein hydroxylation // inferred from direct assay /// 0042127 // regulation of cell proliferation // inferred from expression pattern /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0043523 // regulation of neuron apoptotic process // inferred from sequence or structural similarity /// 0043523 // regulation of neuron apoptotic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0005506 // iron ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016702 // oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen // inferred from electronic annotation /// 0016705 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen // inferred from electronic annotation /// 0016706 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors // inferred from electronic annotation /// 0031418 // L-ascorbic acid binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr14:34393420-34420295 (-) // 88.82 // q13.1"]
["11740767_at",23.117758,23.05662,26.947151,25.791636,25.727491,21.588198,-0.07715464,-0.080975056,0.14397669,0.08074713,0.07715464,-0.17591333,0.99736744,0.9914563,1.0008919,0.0012862007,1.0008919,"up","CCDC73",493860.0,"","","","chr11:32623625-32816203 (-) // 99.73 // p13"]
["11722543_at",12.123626,11.76849,10.880744,9.570753,11.512487,13.5854225,0.058757067,0.01586485,-0.09728694,-0.28235984,-0.01586461,0.22299528,0.9731073,0.9144545,1.012219,0.017521393,1.012219,"up","TRPC1",7220.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006816 // calcium ion transport // traceable author statement /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0051281 // positive regulation of release of sequestered calcium ion into cytosol // inferred from direct assay /// 0051480 // cytosolic calcium ion homeostasis // inferred from direct assay /// 0051592 // response to calcium ion // inferred from direct assay /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0070588 // calcium ion transmembrane transport // traceable author statement /// 0070588 // calcium ion transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // non-traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005261 // cation channel activity // not recorded /// 0005262 // calcium channel activity // traceable author statement /// 0005262 // calcium channel activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0015279 // store-operated calcium channel activity // traceable author statement /// 0044325 // ion channel binding // inferred from physical interaction /// 0070679 // inositol 1,4,5 trisphosphate binding // inferred from direct assay","chr3:142442901-142526730 (+) // 95.51 // q23"]
["11718025_at",69.43664,57.151085,58.373528,66.76351,65.86691,59.74189,0.14654827,-0.13436842,-0.10383463,0.089910984,0.07040548,-0.07040596,0.8404377,0.58599776,-1.0428429,-0.06052179,1.0428429,"down","IL1R1",3554.0,"0006955 // immune response // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // inferred from electronic annotation /// 0030728 // ovulation // inferred from electronic annotation /// 0045087 // innate immune response // inferred from electronic annotation /// 0070498 // interleukin-1-mediated signaling pathway // inferred from direct assay /// 0070498 // interleukin-1-mediated signaling pathway // traceable author statement /// 0070498 // interleukin-1-mediated signaling pathway // inferred from electronic annotation /// 0070555 // response to interleukin-1 // inferred from direct assay /// 0071731 // response to nitric oxide // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031224 // intrinsic to membrane // inferred from electronic annotation","0002020 // protease binding // inferred from electronic annotation /// 0004871 // signal transducer activity // traceable author statement /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // traceable author statement /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0004908 // interleukin-1 receptor activity // inferred from direct assay /// 0004908 // interleukin-1 receptor activity // inferred from electronic annotation /// 0004908 // interleukin-1 receptor activity // traceable author statement /// 0004909 // interleukin-1, Type I, activating receptor activity // inferred from electronic annotation /// 0004909 // interleukin-1, Type I, activating receptor activity // traceable author statement /// 0005161 // platelet-derived growth factor receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction","chr2:102721033-102796334 (+) // 93.64 // q12.1"]
["11735336_at",21.992744,18.740288,18.08706,16.94662,19.964474,19.46016,0.20369434,-0.027190208,-0.07837534,-0.17233562,0.064101696,0.027190208,0.8597586,0.6270651,1.0422665,0.059724193,1.0422665,"up","CPLX4",339302.0,"0006810 // transport // inferred from electronic annotation /// 0006836 // neurotransmitter transport // inferred from electronic annotation /// 0006887 // exocytosis // inferred from electronic annotation /// 0046928 // regulation of neurotransmitter secretion // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0000149 // SNARE binding // inferred from electronic annotation /// 0019905 // syntaxin binding // inferred from electronic annotation","chr18:56962637-56985881 (-) // 92.08 // q21.32"]
["11745176_a_at",509.65518,529.7177,545.7622,528.18896,529.83466,528.42645,-0.053941727,0.0017604828,0.04480934,-0.0024089813,0.00207901,-0.0017604828,0.98635644,0.95390075,-1.0012211,-0.0017605437,1.0012211,"down","TPD52L2",7165.0,"0042127 // regulation of cell proliferation // traceable author statement","0005737 // cytoplasm // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay","chr20:62496599-62521544 (+) // 97.89 // q13.33"]
["11763262_at",35.747772,29.729448,31.764652,40.186913,34.252613,34.068035,0.065536976,-0.20042372,-0.10489416,0.23440933,0.003897667,-0.003897667,0.61096,0.22505146,-1.1157883,-0.15806338,1.1157883,"down","DCN",1634.0,"0001822 // kidney development // inferred from electronic annotation /// 0001890 // placenta development // inferred from electronic annotation /// 0007519 // skeletal muscle tissue development // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0009887 // organ morphogenesis // traceable author statement /// 0019800 // peptide cross-linking via chondroitin 4-sulfate glycosaminoglycan // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0042060 // wound healing // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005589 // collagen type VI // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from sequence or structural similarity","0005518 // collagen binding // inferred from electronic annotation /// 0005539 // glycosaminoglycan binding // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from electronic annotation /// 0050840 // extracellular matrix binding // inferred from electronic annotation","chr12:91566304-91573225 (-) // 92.27 // q21.33"]
["11727419_x_at",3667.041,3684.7744,3937.4778,3757.0518,3907.207,3643.119,-0.020973206,-0.014012337,0.08168316,0.014012337,0.07054901,-0.030413628,0.987229,0.9578546,-1.0017228,-0.0024833546,1.0017228,"down","CNBP",7555.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006695 // cholesterol biosynthetic process // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from sequence or structural similarity /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003697 // single-stranded DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003727 // single-stranded RNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:128886658-128902823 (-) // 71.45 // q21.3"]
["11748389_s_at",114.97761,113.337616,104.73823,106.70733,113.191986,112.93369,0.024229527,0.0035028458,-0.1103363,-0.08346462,0.0016479492,-0.0016479492,0.99854743,0.99571776,1.0001988,2.8683853E-4,1.0001988,"up","GON4L /// YY1AP1","54856 /// 55249","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr1:155630240-155658823 (-) // 92.99 // q22"]
["11728412_x_at",69.13648,71.96216,64.388336,60.220043,63.705612,70.41487,0.05132389,0.10911465,-0.05132389,-0.1478796,-0.06670284,0.07775688,0.7192629,0.3685358,1.0584698,0.08198007,1.0584698,"up","CASZ1",54897.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:10696667-10856707 (-) // 92.73 // p36.22"]
["11739454_x_at",6.929405,8.108491,7.057488,7.974174,8.347985,7.0110483,-0.1145134,0.11218834,-0.08809018,0.08809018,0.15418315,-0.097614765,0.7940075,0.4928669,-1.0558156,-0.07835785,1.0558156,"down","C1QTNF9 /// SPATA13","221178 /// 338872","0016477 // cell migration // inferred from mutant phenotype /// 0030032 // lamellipodium assembly // inferred from mutant phenotype /// 0030334 // regulation of cell migration // inferred from mutant phenotype /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0046847 // filopodium assembly // inferred from mutant phenotype","0005576 // extracellular region // inferred from electronic annotation /// 0005581 // collagen // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from direct assay /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030175 // filopodium // inferred from direct assay /// 0030175 // filopodium // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from direct assay /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005085 // guanyl-nucleotide exchange factor activity // inferred from direct assay /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from mutant phenotype /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005179 // hormone activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0030676 // Rac guanyl-nucleotide exchange factor activity // inferred from direct assay /// 0030676 // Rac guanyl-nucleotide exchange factor activity // inferred from mutant phenotype","chr13:24889029-24896668 (+) // 82.11 // q12.12"]
["11730788_a_at",3780.5698,3740.7998,3584.8743,3883.3042,3724.7612,3829.5417,0.007628441,-0.007628441,-0.069052696,0.04630947,-0.013827324,0.02619648,0.60660625,0.22052492,-1.029952,-0.042577174,1.029952,"down","APLP2",334.0,"0001967 // suckling behavior // inferred from electronic annotation /// 0006878 // cellular copper ion homeostasis // inferred from electronic annotation /// 0007176 // regulation of epidermal growth factor-activated receptor activity // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // non-traceable author statement /// 0007617 // mating behavior // inferred from electronic annotation /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation /// 0030901 // midbrain development // inferred from electronic annotation /// 0050885 // neuromuscular process controlling balance // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008201 // heparin binding // inferred from electronic annotation /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0046914 // transition metal ion binding // inferred from electronic annotation","chr11:129939715-130014700 (+) // 96.31 // q24.3"]
["11720518_a_at",325.23203,338.54056,344.66235,325.04718,338.68314,322.77603,-0.02892971,0.02892971,0.054784775,-0.02974987,0.0295372,-0.039865494,0.73301226,0.3906416,1.0221599,0.031620946,1.0221599,"up","TACC2",10579.0,"0000226 // microtubule cytoskeleton organization // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from electronic annotation /// 0021987 // cerebral cortex development // inferred from electronic annotation /// 0022008 // neurogenesis // inferred from electronic annotation /// 0022027 // interkinetic nuclear migration // inferred from electronic annotation /// 0030953 // astral microtubule organization // inferred from electronic annotation /// 0032886 // regulation of microtubule-based process // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation","0019904 // protein domain specific binding // inferred from electronic annotation /// 0035257 // nuclear hormone receptor binding // inferred from direct assay","chr10:123781450-124014057 (+) // 96.18 // q26.13"]
["11758376_s_at",24.032242,21.751438,20.446083,23.433908,25.087225,23.256102,0.041867733,-0.10199261,-0.19127893,0.0054941177,0.10384941,-0.0054941177,0.58155656,0.19558668,-1.0855436,-0.11841771,1.0855436,"down","C7orf63",79846.0,"","","","chr7:89939683-89940371 (+) // 53.57 // q21.13"]
["11721869_at",114.757256,115.36661,121.47569,117.017395,106.200386,117.06788,-0.017888546,-0.010248661,0.06419325,0.010248184,-0.12968588,0.0108709335,0.75183845,0.4191361,1.0339795,0.04820763,1.0339795,"up","HIF1AN",55662.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0036138 // peptidyl-histidine hydroxylation // inferred from direct assay /// 0042264 // peptidyl-aspartic acid hydroxylation // inferred from direct assay /// 0042265 // peptidyl-asparagine hydroxylation // inferred from direct assay /// 0042265 // peptidyl-asparagine hydroxylation // inferred from mutant phenotype /// 0045663 // positive regulation of myoblast differentiation // inferred from direct assay /// 0045746 // negative regulation of Notch signaling pathway // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0061428 // negative regulation of transcription from RNA polymerase II promoter in response to hypoxia // inferred from direct assay /// 2001214 // positive regulation of vasculogenesis // non-traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005112 // Notch binding // inferred from physical interaction /// 0005506 // iron ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from direct assay /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016702 // oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen // inferred from electronic annotation /// 0016706 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors // inferred from electronic annotation /// 0019826 // oxygen sensor activity // non-traceable author statement /// 0031406 // carboxylic acid binding // inferred from direct assay /// 0036139 // peptidyl-histidine dioxygenase activity // inferred from direct assay /// 0036140 // peptidyl-asparagine 3-dioxygenase activity // inferred from direct assay /// 0036140 // peptidyl-asparagine 3-dioxygenase activity // inferred from mutant phenotype /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0048037 // cofactor binding // inferred from direct assay /// 0051059 // NF-kappaB binding // inferred from physical interaction /// 0071532 // ankyrin repeat binding // inferred from physical interaction","chr10:102295615-102313681 (+) // 86.41 // q24.31"]
["11720067_a_at",25.02355,26.054138,24.736094,29.69164,27.82591,27.169624,-0.08846712,-0.030241013,-0.10513592,0.15830326,0.06467533,0.030241013,0.27202502,0.023286495,-1.1165293,-0.15902117,1.1165293,"down","APH1B",83464.0,"0006915 // apoptotic process // traceable author statement /// 0007219 // Notch signaling pathway // traceable author statement /// 0007219 // Notch signaling pathway // inferred from electronic annotation /// 0007220 // Notch receptor processing // traceable author statement /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0016485 // protein processing // inferred from direct assay /// 0016485 // protein processing // inferred from electronic annotation /// 0031293 // membrane protein intracellular domain proteolysis // traceable author statement /// 0043085 // positive regulation of catalytic activity // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030133 // transport vesicle // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from direct assay","chr15:63569717-63601318 (+) // 91.93 // q22.2"]
["11720038_at",187.17644,187.81386,188.0269,175.31886,193.9801,188.24292,-0.005722046,-8.177757E-4,8.177757E-4,-0.100140095,0.045787334,0.002474308,0.9094483,0.74037325,1.0107214,0.015385445,1.0107214,"up","VTA1",51534.0,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016044 // cellular membrane organization // traceable author statement /// 0016197 // endosomal transport // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","","chr6:142468218-142542083 (+) // 85.62 // q24.1"]
["11733855_a_at",300.1129,279.16812,287.139,319.3922,317.77106,316.45984,-0.038258553,-0.14262962,-0.10201454,0.05156517,0.044223785,0.038258553,0.20083624,0.010502892,-1.1011289,-0.13898341,1.1011289,"down","APOL1",8542.0,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006821 // chloride transport // inferred from direct assay /// 0006869 // lipid transport // inferred from electronic annotation /// 0008202 // steroid metabolic process // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // inferred from electronic annotation /// 0019835 // cytolysis // inferred from direct assay /// 0031640 // killing of cells of other organism // inferred from direct assay /// 0042157 // lipoprotein metabolic process // inferred from electronic annotation /// 0045087 // innate immune response // inferred from direct assay","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0031224 // intrinsic to membrane // inferred by curator /// 0034361 // very-low-density lipoprotein particle // inferred from direct assay /// 0034364 // high-density lipoprotein particle // inferred from direct assay /// 0034364 // high-density lipoprotein particle // inferred from electronic annotation","0005254 // chloride channel activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008289 // lipid binding // inferred from direct assay /// 0008289 // lipid binding // inferred from electronic annotation","chr22:36649116-36663576 (+) // 69.27 // q12.3"]
["11748002_a_at",595.7917,595.7074,580.5806,557.81573,553.44794,579.98914,0.038046837,0.03784275,7.352829E-4,-0.056972504,-0.0683136,-7.352829E-4,0.35982838,0.049818937,1.0479347,0.06754875,1.0479347,"up","HPCAL1",3241.0,"","","0005509 // calcium ion binding // inferred from electronic annotation /// 0005509 // calcium ion binding // traceable author statement","chr2:10508692-10567217 (+) // 99.81 // p25.1"]
["11718248_a_at",50.659428,52.08169,48.681152,46.49072,51.0277,48.72249,0.028121471,0.068067074,-0.02934599,-0.095766544,0.038571358,-0.028121471,0.70741326,0.35018587,1.0357815,0.0507197,1.0357815,"up","KIAA0430",9665.0,"0007126 // meiosis // inferred from electronic annotation /// 0007143 // female meiosis // inferred from sequence or structural similarity /// 0010468 // regulation of gene expression // inferred from sequence or structural similarity /// 0010923 // negative regulation of phosphatase activity // inferred from direct assay /// 0030154 // cell differentiation // inferred from electronic annotation /// 0048477 // oogenesis // inferred from sequence or structural similarity /// 0048477 // oogenesis // inferred from electronic annotation","0005777 // peroxisome // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation","chr16:15688243-15733150 (-) // 96.88 // p13.11"]
["11749510_a_at",168.94113,181.40901,179.45381,176.16447,192.45941,170.89998,-0.07374716,0.028978348,0.013345242,-0.013344765,0.11428642,-0.057115555,0.89108884,0.69987947,-1.0175384,-0.02508328,1.0175384,"down","SAMHD1",25939.0,"0006955 // immune response // non-traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0045087 // innate immune response // inferred from electronic annotation /// 0045088 // regulation of innate immune response // inferred from mutant phenotype /// 0051607 // defense response to virus // inferred from mutant phenotype","0005622 // intracellular // non-traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from direct assay /// 0003824 // catalytic activity // inferred from electronic annotation /// 0008081 // phosphoric diester hydrolase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr20:35521053-35580075 (-) // 99.11 // q11.23"]
["11758928_at",221.7421,217.92557,221.83813,208.10194,225.62027,207.24127,0.012523651,-0.012524128,0.013148308,-0.07906866,0.037537575,-0.08504772,0.68386275,0.31721786,1.0328104,0.0465755,1.0328104,"up","NLN",57486.0,"0006508 // proteolysis // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005758 // mitochondrial intermembrane space // inferred from electronic annotation","0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr5:65018022-65123628 (+) // 81.7 // q12.3"]
["11725876_at",85.73365,78.018364,94.96064,83.23855,76.47263,85.63235,0.022157669,-0.11389017,0.16962576,-0.020452023,-0.14276028,0.020452023,0.79048395,0.48384318,1.0523038,0.07355126,1.0523038,"up","GPIHBP1",338328.0,"0006869 // lipid transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from sequence or structural similarity /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0017038 // protein import // inferred from sequence or structural similarity /// 0017038 // protein import // inferred from electronic annotation /// 0034394 // protein localization at cell surface // inferred from sequence or structural similarity /// 0034394 // protein localization at cell surface // inferred from electronic annotation /// 0042632 // cholesterol homeostasis // inferred from sequence or structural similarity /// 0042632 // cholesterol homeostasis // inferred from electronic annotation /// 0045056 // transcytosis // inferred from sequence or structural similarity /// 0045056 // transcytosis // inferred from electronic annotation /// 0050821 // protein stabilization // inferred from sequence or structural similarity /// 0050821 // protein stabilization // inferred from electronic annotation /// 0051006 // positive regulation of lipoprotein lipase activity // inferred from mutant phenotype /// 0051006 // positive regulation of lipoprotein lipase activity // inferred from electronic annotation /// 0070328 // triglyceride homeostasis // inferred from mutant phenotype /// 0070328 // triglyceride homeostasis // inferred from electronic annotation /// 0071503 // response to heparin // inferred from mutant phenotype /// 0090321 // positive regulation of chylomicron remnant clearance // inferred from sequence or structural similarity /// 0090321 // positive regulation of chylomicron remnant clearance // inferred from electronic annotation","0005622 // intracellular // inferred from sequence or structural similarity /// 0005622 // intracellular // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009897 // external side of plasma membrane // inferred from direct assay /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from sequence or structural similarity /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from sequence or structural similarity /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0031362 // anchored to external side of plasma membrane // inferred from direct assay /// 0034364 // high-density lipoprotein particle // inferred from electronic annotation /// 0046658 // anchored to plasma membrane // inferred from electronic annotation","0008035 // high-density lipoprotein particle binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation /// 0008320 // protein transmembrane transporter activity // inferred from sequence or structural similarity /// 0008320 // protein transmembrane transporter activity // inferred from electronic annotation /// 0034185 // apolipoprotein binding // inferred from physical interaction /// 0035473 // lipase binding // inferred from physical interaction /// 0035473 // lipase binding // inferred from electronic annotation /// 0035478 // chylomicron binding // inferred from direct assay /// 0035478 // chylomicron binding // inferred from electronic annotation /// 0071813 // lipoprotein particle binding // inferred from direct assay /// 0071813 // lipoprotein particle binding // inferred from electronic annotation","chr8:144295067-144299044 (+) // 76.09 // q24.3"]
["11747313_a_at",435.82404,416.92355,455.6395,457.71945,428.542,443.66074,-0.01285553,-0.076818466,0.051291466,0.05786228,-0.037164688,0.01285553,0.86109865,0.6300882,-1.0167595,-0.02397849,1.0167595,"down","OXA1L",5018.0,"0006461 // protein complex assembly // non-traceable author statement /// 0009060 // aerobic respiration // inferred from mutant phenotype /// 0009060 // aerobic respiration // non-traceable author statement /// 0032780 // negative regulation of ATPase activity // inferred from mutant phenotype /// 0032981 // mitochondrial respiratory chain complex I assembly // inferred from mutant phenotype /// 0033615 // mitochondrial proton-transporting ATP synthase complex assembly // inferred from mutant phenotype /// 0051205 // protein insertion into membrane // inferred from electronic annotation /// 0051262 // protein tetramerization // inferred from direct assay /// 0051354 // negative regulation of oxidoreductase activity // inferred from mutant phenotype /// 0055114 // oxidation-reduction process // non-traceable author statement /// 0097031 // mitochondrial respiratory chain complex I biogenesis // inferred from mutant phenotype","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from mutant phenotype /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005746 // mitochondrial respiratory chain // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from direct assay /// 0032592 // integral to mitochondrial membrane // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0043022 // ribosome binding // inferred from direct assay","chr14:23235883-23238461 (+) // 54.89 // q11.2"]
["11737218_x_at",24.608074,28.43849,25.219069,30.368702,26.266443,25.30394,-0.06715965,0.1415534,-0.03177643,0.2362938,0.026929379,-0.026929379,0.8311715,0.5647135,-1.045765,-0.06455875,1.045765,"down","HHLA3",11147.0,"","","0005515 // protein binding // inferred from physical interaction","chr1:70820490-70820893 (+) // 30.17 // p31.1"]
["11764044_a_at",179.01868,187.54068,182.33992,202.03235,188.80771,204.72821,-0.07195091,-0.0048570633,-0.045430183,0.10252571,0.0048565865,0.121649265,0.3515877,0.04642712,-1.084545,-0.117089935,1.084545,"down","ABTB1",80325.0,"0006412 // translation // inferred from electronic annotation /// 0006414 // translational elongation // inferred from electronic annotation","0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay","0003746 // translation elongation factor activity // inferred from electronic annotation","chr3:127398206-127398908 (+) // 72.42 // q21.3"]
["11744697_x_at",330.8716,323.56967,349.41025,344.0266,381.7748,359.4499,-0.06744957,-0.09964466,0.011200905,-0.011200905,0.1390009,0.052069664,0.4746302,0.10963722,-1.0806662,-0.111920945,1.0806662,"down","CCDC90B",60492.0,"","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr11:82970340-82997430 (-) // 71.65 // q14.1"]
["11745587_x_at",124.28921,118.98046,117.109985,115.28595,116.94456,118.85366,0.07517576,0.012199402,-0.010661125,-0.033308506,-0.012700081,0.010661125,0.6407917,0.26207662,1.0262299,0.037353907,1.0262299,"up","TUBD1",51174.0,"0006184 // GTP catabolic process // inferred from electronic annotation /// 0007017 // microtubule-based process // inferred from electronic annotation /// 0007018 // microtubule-based movement // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0051258 // protein polymerization // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005814 // centriole // inferred from electronic annotation /// 0005814 // centriole // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005198 // structural molecule activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation","chr17:57937394-57970219 (-) // 87.81 // q23.1"]
["11763009_at",11.175579,10.833008,11.904219,10.162073,8.795672,12.1922,0.022457838,-0.022457838,0.11358142,-0.11469698,-0.32302594,0.14806676,0.7380576,0.3976053,1.0976458,0.13441253,1.0976458,"up",0.11358142,"","","","","0005216 // ion channel activity // inferred from electronic annotation"]
["11739350_a_at",6.9098063,6.760006,6.2881703,7.4115424,7.351229,7.398825,-0.044670105,-0.076290846,-0.18067503,0.056458473,0.044670105,0.053981066,0.26288724,0.020999243,-1.1113001,-0.15224847,1.1113001,"down","AMOT",154796.0,"0001570 // vasculogenesis // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001702 // gastrulation with mouth forming second // inferred from electronic annotation /// 0003365 // establishment of cell polarity involved in ameboidal cell migration // inferred from electronic annotation /// 0006935 // chemotaxis // inferred from electronic annotation /// 0007043 // cell-cell junction assembly // traceable author statement /// 0016525 // negative regulation of angiogenesis // inferred from direct assay /// 0030036 // actin cytoskeleton organization // traceable author statement /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030334 // regulation of cell migration // inferred from direct assay /// 0034260 // negative regulation of GTPase activity // inferred from electronic annotation /// 0034613 // cellular protein localization // inferred from direct assay /// 0034613 // cellular protein localization // inferred from electronic annotation /// 0035329 // hippo signaling cascade // inferred from genetic interaction /// 0035329 // hippo signaling cascade // traceable author statement /// 0040019 // positive regulation of embryonic development // inferred from electronic annotation /// 0042074 // cell migration involved in gastrulation // inferred from electronic annotation /// 0043116 // negative regulation of vascular permeability // inferred from direct assay /// 0043534 // blood vessel endothelial cell migration // inferred from electronic annotation /// 0043536 // positive regulation of blood vessel endothelial cell migration // inferred from direct assay /// 0045793 // positive regulation of cell size // traceable author statement /// 0048514 // blood vessel morphogenesis // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // inferred from electronic annotation /// 0051496 // positive regulation of stress fiber assembly // traceable author statement","0001725 // stress fiber // inferred from direct assay /// 0001726 // ruffle // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005884 // actin filament // inferred from direct assay /// 0005923 // tight junction // inferred from direct assay /// 0005923 // tight junction // inferred from electronic annotation /// 0008180 // signalosome // inferred from direct assay /// 0009897 // external side of plasma membrane // inferred from direct assay /// 0009986 // cell surface // inferred from direct assay /// 0016021 // integral to membrane // inferred from direct assay /// 0030027 // lamellipodium // inferred from direct assay /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030139 // endocytic vesicle // inferred from direct assay /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0004872 // receptor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0043532 // angiostatin binding // inferred from direct assay","chrX:112018105-112068356 (-) // 89.21 // q23"]
["11744758_a_at",276.26575,266.39807,283.47385,320.3022,318.37405,307.54916,-0.09595966,-0.14843273,-0.058800697,0.117417336,0.108706474,0.058800697,0.13627832,0.0035034984,-1.145549,-0.19603924,1.145549,"down","PSORS1C1",170679.0,"","","","chr6:31106157-31107867 (+) // 90.9 // p21.33"]
["11728741_at",518.6425,533.44354,560.7738,484.89124,481.5007,499.44693,0.027204514,0.06779957,0.13988304,-0.06987476,-0.07999802,-0.027204514,0.2579812,0.020100012,1.0998611,0.1373214,1.0998611,"up","COQ3",51805.0,"0006071 // glycerol metabolic process // inferred from genetic interaction /// 0006744 // ubiquinone biosynthetic process // inferred from electronic annotation /// 0006744 // ubiquinone biosynthetic process // inferred from genetic interaction /// 0008152 // metabolic process // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation","0005739 // mitochondrion // inferred from reviewed computational analysis /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // inferred from electronic annotation","0004395 // hexaprenyldihydroxybenzoate methyltransferase activity // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008171 // O-methyltransferase activity // traceable author statement /// 0008425 // 2-polyprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity // inferred from electronic annotation /// 0008689 // 3-demethylubiquinone-9 3-O-methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr6:99817276-99842080 (-) // 92.37 // q16.2"]
["11758250_s_at",261.62988,265.60785,287.7668,274.3204,289.2307,275.4033,-0.07117653,-0.04940605,0.06619644,-0.0028419495,0.073516846,0.0028419495,0.76111937,0.43505302,-1.0299928,-0.04263428,1.0299928,"down","FBXL3",26224.0,"0016567 // protein ubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // non-traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0031146 // SCF-dependent proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0042752 // regulation of circadian rhythm // inferred from mutant phenotype /// 0042752 // regulation of circadian rhythm // inferred from electronic annotation /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0048511 // rhythmic process // inferred from electronic annotation","0000151 // ubiquitin ligase complex // non-traceable author statement /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0019005 // SCF ubiquitin ligase complex // inferred from direct assay","0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0004842 // ubiquitin-protein ligase activity // non-traceable author statement /// 0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr13:77580302-77580889 (-) // 100.0 // q22.3"]
["11734761_a_at",29.30383,29.721205,32.80567,27.823658,30.708733,33.67382,-0.043981552,-0.023578167,0.11887407,-0.11875868,0.023578167,0.1565566,0.992332,0.97340745,-1.0023274,-0.0033538877,1.0023274,"down","HIP1",3092.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006897 // endocytosis // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from direct assay /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from direct assay /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0008219 // cell death // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from direct assay /// 0048260 // positive regulation of receptor-mediated endocytosis // inferred from mutant phenotype /// 0048260 // positive regulation of receptor-mediated endocytosis // inferred from electronic annotation /// 0048268 // clathrin coat assembly // inferred from direct assay","0005624 // membrane fraction // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005856 // cytoskeleton // traceable author statement /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030136 // clathrin-coated vesicle // inferred from direct assay /// 0030665 // clathrin coated vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0003779 // actin binding // inferred from electronic annotation /// 0005200 // structural constituent of cytoskeleton // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0030276 // clathrin binding // inferred from direct assay /// 0035091 // phosphatidylinositol binding // inferred from direct assay","chr7:75162618-75368283 (-) // 86.45 // q11.23"]
["11736716_s_at",5.5841255,5.422158,5.2857404,5.729375,5.5423436,6.363249,0.0054175854,-0.03704667,-0.07380819,0.042464018,-0.0054175854,0.1938498,0.53921443,0.15603288,-1.0808086,-0.112111114,1.0808086,"down","TMPRSS11E",28983.0,"0006508 // proteolysis // inferred from sequence or structural similarity /// 0006508 // proteolysis // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from sequence or structural similarity /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from sequence or structural similarity /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr4:69313166-69363322 (+) // 99.95 // q13.2"]
["11717672_s_at",6.4558277,6.317476,6.3786817,6.9974136,6.9952655,6.4904637,-0.0038597584,-0.035113573,-0.021203518,0.11235976,0.11191702,0.0038597584,0.38792947,0.061140418,-1.0688834,-0.09610451,1.0688834,"down","ENPP2",5168.0,"0006796 // phosphate-containing compound metabolic process // traceable author statement /// 0006928 // cellular component movement // traceable author statement /// 0006935 // chemotaxis // non-traceable author statement /// 0006935 // chemotaxis // inferred from electronic annotation /// 0006955 // immune response // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0016042 // lipid catabolic process // inferred from electronic annotation /// 0030334 // regulation of cell migration // inferred from direct assay /// 0034638 // phosphatidylcholine catabolic process // inferred from direct assay","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from sequence or structural similarity /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004528 // phosphodiesterase I activity // traceable author statement /// 0004551 // nucleotide diphosphatase activity // traceable author statement /// 0004622 // lysophospholipase activity // inferred from direct assay /// 0005044 // scavenger receptor activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from sequence or structural similarity /// 0008134 // transcription factor binding // traceable author statement /// 0008270 // zinc ion binding // inferred from sequence or structural similarity /// 0016787 // hydrolase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0030247 // polysaccharide binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047391 // alkylglycerophosphoethanolamine phosphodiesterase activity // inferred from electronic annotation","chr8:120569314-120651106 (-) // 99.85 // q24.12"]
["11758636_s_at",5.8154697,5.610627,6.422306,5.892693,6.0853167,6.3921733,-0.042233944,-0.093967676,0.100961685,-0.023202658,0.023202658,0.09417677,0.8281483,0.5578328,-1.0303532,-0.043138955,1.0303532,"down","ASPN",54829.0,"0030282 // bone mineralization // inferred from direct assay /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // inferred from direct assay /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0031214 // biomineral tissue development // inferred from electronic annotation /// 0070171 // negative regulation of tooth mineralization // inferred from sequence or structural similarity /// 0070171 // negative regulation of tooth mineralization // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from direct assay /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from direct assay","0005509 // calcium ion binding // inferred from direct assay","chr9:95218490-95218826 (-) // 98.82 // q22.31"]
["11716824_s_at",8.146398,10.048584,8.604127,7.8348107,10.099605,9.945085,-0.18334389,0.11941409,-0.104477406,-0.23960781,0.12672043,0.104477406,0.9088233,0.7389381,-1.037659,-0.053332485,1.037659,"down","BDH2",56898.0,"0006635 // fatty acid beta-oxidation // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation /// 0009239 // enterobactin biosynthetic process // inferred from electronic annotation /// 0019290 // siderophore biosynthetic process // inferred from sequence or structural similarity /// 0019290 // siderophore biosynthetic process // inferred from electronic annotation /// 0042168 // heme metabolic process // inferred from sequence or structural similarity /// 0055072 // iron ion homeostasis // inferred from sequence or structural similarity /// 0055072 // iron ion homeostasis // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003858 // 3-hydroxybutyrate dehydrogenase activity // inferred from direct assay /// 0003858 // 3-hydroxybutyrate dehydrogenase activity // inferred from electronic annotation /// 0008667 // 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016628 // oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor // inferred from sequence or structural similarity /// 0016628 // oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0051287 // NAD binding // inferred from direct assay","chr4:103998764-104021064 (-) // 75.83 // q24"]
["11757145_x_at",17.420729,18.284481,14.269977,18.698105,17.17277,18.889748,-0.03490734,0.03490734,-0.32272935,0.06717968,-0.055589676,0.08189106,0.67401963,0.30421177,-1.1009407,-0.13873677,1.1009407,"down","SNORA13",654322.0,"","","","chr5:111497181-111497314 (+) // 100.0 // q22.1"]
["11715371_a_at",1719.3303,1771.2898,1799.2988,1707.9618,1647.842,1647.1005,0.0047855377,0.04773903,0.070373535,-0.0047855377,-0.05648327,-0.05713272,0.31990212,0.0360178,1.0573355,0.08043322,1.0573355,"up","UBA1",7317.0,"0006464 // cellular protein modification process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation","","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008641 // small protein activating enzyme activity // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation","chrX:47052901-47074527 (+) // 85.62 // p11.23"]
["11738502_s_at",7.958773,7.8595424,7.226459,7.9930105,7.8100023,8.350262,0.009050131,-0.009050369,-0.13020682,0.015243292,-0.018172503,0.07832575,0.63774925,0.25847927,-1.048651,-0.06853459,1.048651,"down","OR2L3 /// OR2L8","391190 /// 391192","0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr1:248223950-248224975 (+) // 100.0 // q44 /// chr1:248112126-248113151 (+) // 95.9 // q44"]
["11750087_a_at",10.854665,10.590899,11.135932,11.068297,10.276643,10.950054,-0.0063114166,-0.041801453,0.03059578,0.021806717,-0.08525753,0.0063114166,0.9152616,0.75434124,1.0091968,0.013207477,1.0091968,"up","CALCB",797.0,"0006874 // cellular calcium ion homeostasis // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0042311 // vasodilation // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005625 // soluble fraction // traceable author statement","0005179 // hormone activity // inferred from electronic annotation /// 0005184 // neuropeptide hormone activity // traceable author statement","chr11:15095107-15099018 (+) // 77.06 // p15.2"]
["11738820_a_at",14.235845,15.043575,13.152615,14.012406,14.974383,17.32745,-0.036484003,0.043135166,-0.15066266,-0.059307575,0.03648424,0.24704695,0.68098277,0.31343544,-1.0888046,-0.12274507,1.0888046,"down","PCDHA2",56146.0,"0007155 // cell adhesion // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement","0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr5:140174443-140177062 (+) // 99.96 // q31.3"]
["11735106_at",15.579455,17.062433,15.767772,15.1293955,17.285435,16.685043,-0.058122396,0.07305622,-0.040788174,-0.100412846,0.09178972,0.040788174,0.9322544,0.79795086,-1.0134956,-0.019339774,1.0134956,"down","CD40LG",959.0,"0002839 // positive regulation of immune response to tumor cell // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from direct assay /// 0006954 // inflammatory response // inferred from direct assay /// 0006955 // immune response // inferred from electronic annotation /// 0007159 // leukocyte cell-cell adhesion // non-traceable author statement /// 0030168 // platelet activation // inferred from direct assay /// 0030183 // B cell differentiation // inferred from electronic annotation /// 0030890 // positive regulation of B cell proliferation // inferred from electronic annotation /// 0032729 // positive regulation of interferon-gamma production // inferred from electronic annotation /// 0032733 // positive regulation of interleukin-10 production // inferred from electronic annotation /// 0032735 // positive regulation of interleukin-12 production // inferred from direct assay /// 0032735 // positive regulation of interleukin-12 production // inferred from electronic annotation /// 0042100 // B cell proliferation // inferred from direct assay /// 0045190 // isotype switching // inferred from sequence or structural similarity /// 0045190 // isotype switching // inferred from electronic annotation /// 0045348 // positive regulation of MHC class II biosynthetic process // inferred from electronic annotation /// 0048305 // immunoglobulin secretion // inferred from electronic annotation /// 0050776 // regulation of immune response // traceable author statement /// 0051023 // regulation of immunoglobulin secretion // inferred from electronic annotation /// 2000353 // positive regulation of endothelial cell apoptotic process // inferred from direct assay","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005625 // soluble fraction // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0005125 // cytokine activity // inferred from electronic annotation /// 0005164 // tumor necrosis factor receptor binding // inferred from electronic annotation /// 0005174 // CD40 receptor binding // inferred from physical interaction","chrX:135730236-135742549 (+) // 90.46 // q26.3"]
["11763086_at",35.21113,37.732536,38.56935,41.37931,36.96078,31.539677,-0.084870815,0.014906883,0.046552658,0.1480074,-0.014906883,-0.24373436,0.94057024,0.82094413,1.0203571,0.029074194,1.0203571,"up",-0.24373436,-0.084870815,0.014906883,0.046552658,"C5orf17",439936.0]
["11751484_x_at",15.27001,16.914003,17.772621,14.608709,16.914003,13.990781,-0.07375836,0.0737586,0.14519691,-0.1376307,0.0737586,-0.19998312,0.64206666,0.26375493,1.0991215,0.13635081,1.0991215,"up","BGN",633.0,"0001974 // blood vessel remodeling // inferred from electronic annotation /// 0019800 // peptide cross-linking via chondroitin 4-sulfate glycosaminoglycan // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // non-traceable author statement /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0009986 // cell surface // inferred from electronic annotation /// 0030133 // transport vesicle // inferred from direct assay /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from sequence or structural similarity /// 0031012 // extracellular matrix // inferred from electronic annotation /// 0042383 // sarcolemma // inferred from electronic annotation /// 0044424 // intracellular part // inferred from electronic annotation","0005201 // extracellular matrix structural constituent // non-traceable author statement /// 0005539 // glycosaminoglycan binding // inferred from electronic annotation /// 0050840 // extracellular matrix binding // inferred from electronic annotation","chrX:152760433-152774295 (+) // 98.7 // q28"]
["11721446_a_at",283.45154,288.52112,293.06888,252.10942,257.6449,257.30023,0.0688591,0.094433784,0.116996765,-0.10019302,-0.0688591,-0.07079029,0.08129973,5.4596725E-4,1.1276953,0.17337734,1.1276953,"up","SNX4",8723.0,"0006810 // transport // inferred from electronic annotation /// 0006897 // endocytosis // traceable author statement /// 0007154 // cell communication // inferred from electronic annotation /// 0015031 // protein transport // inferred from mutant phenotype /// 0015031 // protein transport // inferred from electronic annotation /// 0032456 // endocytic recycling // inferred from mutant phenotype","0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005868 // cytoplasmic dynein complex // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from direct assay /// 0031901 // early endosome membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008289 // lipid binding // inferred from electronic annotation /// 0035091 // phosphatidylinositol binding // inferred from mutant phenotype /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation","chr3:125165493-125239046 (-) // 93.38 // q21.2"]
["11755761_a_at",8.755291,8.371817,8.102945,8.425013,8.473952,8.896239,0.05129814,-0.0133161545,-0.0604105,-0.004178047,0.004178047,0.074338675,0.78523046,0.47387055,-1.0226098,-0.0322558,1.0226098,"down","FANCM",57697.0,"0000712 // resolution of meiotic recombination intermediates // inferred from mutant phenotype /// 0006259 // DNA metabolic process // inferred from electronic annotation /// 0006281 // DNA repair // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0031297 // replication fork processing // inferred from mutant phenotype /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0043240 // Fanconi anaemia nuclear complex // inferred from direct assay /// 0071821 // FANCM-MHF complex // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from direct assay /// 0004386 // helicase activity // inferred from electronic annotation /// 0004518 // nuclease activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr14:45623961-45670092 (+) // 92.79 // q21.2"]
["11760667_at",28.586086,37.583897,26.43054,30.384676,29.621008,31.818977,-0.06966925,0.32513237,-0.18277645,0.018361568,-0.018361568,0.08490515,0.9940114,0.9805332,-1.002827,-0.0040728142,1.002827,"down","TBXAS1",6916.0,"0001516 // prostaglandin biosynthetic process // inferred from electronic annotation /// 0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0006690 // icosanoid metabolic process // traceable author statement /// 0006692 // prostanoid metabolic process // traceable author statement /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0030644 // cellular chloride ion homeostasis // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0045907 // positive regulation of vasoconstriction // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004497 // monooxygenase activity // inferred from electronic annotation /// 0004796 // thromboxane-A synthase activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from electronic annotation /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016705 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation /// 0020037 // heme binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:139529047-139613828 (+) // 100.0 // q34"]
["11715534_a_at",126.22118,122.467125,128.44635,124.402306,122.81106,129.2994,0.01047039,-0.033088684,0.03568268,-0.0104699135,-0.02904272,0.045232296,0.98183185,0.9389295,1.0016984,0.0024481583,1.0016984,"up","LRP1",4035.0,"0006897 // endocytosis // inferred from electronic annotation /// 0006898 // receptor-mediated endocytosis // inferred from electronic annotation /// 0007205 // protein kinase C-activating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from electronic annotation /// 0010875 // positive regulation of cholesterol efflux // inferred from sequence or structural similarity /// 0010875 // positive regulation of cholesterol efflux // inferred from electronic annotation /// 0014912 // negative regulation of smooth muscle cell migration // inferred from sequence or structural similarity /// 0014912 // negative regulation of smooth muscle cell migration // inferred from electronic annotation /// 0030178 // negative regulation of Wnt receptor signaling pathway // inferred from sequence or structural similarity /// 0030178 // negative regulation of Wnt receptor signaling pathway // inferred from electronic annotation /// 0032370 // positive regulation of lipid transport // inferred from sequence or structural similarity /// 0032370 // positive regulation of lipid transport // inferred from electronic annotation /// 0032374 // regulation of cholesterol transport // inferred from sequence or structural similarity /// 0032374 // regulation of cholesterol transport // inferred from electronic annotation /// 0032429 // regulation of phospholipase A2 activity // inferred from sequence or structural similarity /// 0032429 // regulation of phospholipase A2 activity // inferred from electronic annotation /// 0032956 // regulation of actin cytoskeleton organization // inferred from sequence or structural similarity /// 0032956 // regulation of actin cytoskeleton organization // inferred from electronic annotation /// 0035909 // aorta morphogenesis // inferred from sequence or structural similarity /// 0035909 // aorta morphogenesis // inferred from electronic annotation /// 0042157 // lipoprotein metabolic process // inferred from electronic annotation /// 0042953 // lipoprotein transport // non-traceable author statement /// 0043277 // apoptotic cell clearance // inferred from sequence or structural similarity /// 0043277 // apoptotic cell clearance // inferred from electronic annotation /// 0045768 // positive regulation of anti-apoptosis // inferred from electronic annotation /// 0051222 // positive regulation of protein transport // inferred from electronic annotation /// 2000587 // negative regulation of platelet-derived growth factor receptor-beta signaling pathway // inferred from sequence or structural similarity /// 2000587 // negative regulation of platelet-derived growth factor receptor-beta signaling pathway // inferred from electronic annotation","0005624 // membrane fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from sequence or structural similarity /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0005905 // coated pit // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030136 // clathrin-coated vesicle // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0002020 // protease binding // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004872 // receptor activity // traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0032403 // protein complex binding // inferred from direct assay /// 0034185 // apolipoprotein binding // inferred from physical interaction /// 0042954 // lipoprotein transporter activity // non-traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070325 // lipoprotein particle receptor binding // inferred by curator","chr12:57522281-57607142 (+) // 99.36 // q13.3"]
["11740363_a_at",42.219917,41.95564,40.316544,41.208473,42.89483,41.104603,0.022020817,0.0129618645,-0.04453087,-0.0129618645,0.044900894,-0.016602993,0.92861944,0.7878557,-1.005766,-0.008294738,1.005766,"down","PTPN3",5774.0,"0006470 // protein dephosphorylation // inferred from direct assay /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0006470 // protein dephosphorylation // traceable author statement /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from direct assay /// 0035335 // peptidyl-tyrosine dephosphorylation // traceable author statement /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation /// 0045930 // negative regulation of mitotic cell cycle // inferred from direct assay /// 0051045 // negative regulation of membrane protein ectodomain proteolysis // inferred from mutant phenotype","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009898 // internal side of plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation","0001784 // phosphotyrosine binding // inferred from physical interaction /// 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from direct assay /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008092 // cytoskeletal protein binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0051117 // ATPase binding // inferred from physical interaction","chr9:112137973-112225734 (-) // 87.82 // q31.3"]
["11721133_at",194.34737,195.0568,193.25786,196.72684,183.87404,194.66765,-0.0011878014,0.0040688515,-0.009298325,0.01636839,-0.08110762,0.0011878014,0.8320595,0.56655836,1.0132883,0.019044649,1.0132883,"up","GFPT2",9945.0,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006002 // fructose 6-phosphate metabolic process // traceable author statement /// 0006048 // UDP-N-acetylglucosamine biosynthetic process // inferred from electronic annotation /// 0006048 // UDP-N-acetylglucosamine biosynthetic process // traceable author statement /// 0006112 // energy reserve metabolic process // traceable author statement /// 0006488 // dolichol-linked oligosaccharide biosynthetic process // traceable author statement /// 0006541 // glutamine metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0016051 // carbohydrate biosynthetic process // inferred from electronic annotation /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0004360 // glutamine-fructose-6-phosphate transaminase (isomerizing) activity // inferred from electronic annotation /// 0004360 // glutamine-fructose-6-phosphate transaminase (isomerizing) activity // traceable author statement /// 0008483 // transaminase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr5:179727697-179780387 (-) // 96.58 // q35.3"]
["11754708_s_at",6.946969,7.382184,6.3464794,7.1371937,6.916124,7.622414,-0.019486666,0.06817746,-0.14991379,0.019486666,-0.025906563,0.11437774,0.74518746,0.408827,-1.049518,-0.06972689,1.049518,"down","GNN",253724.0,"","0005737 // cytoplasm // inferred from electronic annotation","","chr12:104237527-104276366 (-) // 98.26 // q23.3"]
["11730046_a_at",8.539861,7.0599923,7.422091,9.740328,9.676352,8.601896,-0.0052211285,-0.27976704,-0.20760798,0.18453646,0.17502975,0.0052211285,0.35357836,0.04699346,-1.2190814,-0.28579447,1.2190814,"down","DSCAML1",57453.0,"0001709 // cell fate determination // non-traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from direct assay /// 0007162 // negative regulation of cell adhesion // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007409 // axonogenesis // non-traceable author statement /// 0007417 // central nervous system development // non-traceable author statement /// 0007420 // brain development // inferred from direct assay /// 0009953 // dorsal/ventral pattern formation // non-traceable author statement /// 0048704 // embryonic skeletal system morphogenesis // inferred from direct assay /// 0070593 // dendrite self-avoidance // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0042803 // protein homodimerization activity // inferred from direct assay","chr11:117298488-117667976 (-) // 99.93 // q23.3"]
["11730545_a_at",116.565796,132.38899,121.08194,142.58955,129.4328,129.61449,-0.152071,0.031567574,-0.09723234,0.13865328,-0.0010118484,0.0010113716,0.55592036,0.17150496,-1.0858284,-0.118796155,1.0858284,"down","EFCAB11",90141.0,"","","0005509 // calcium ion binding // inferred from electronic annotation","chr14:90261932-90421089 (-) // 69.34 // q32.11"]
["11750663_x_at",143.04073,148.66124,152.06941,153.16801,153.16801,152.98259,-0.09262276,-0.03701973,-0.0043182373,0.006066799,0.006066799,0.004318714,0.49663258,0.12371173,-1.0353637,-0.050137606,1.0353637,"down","SLC24A6",80024.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006811 // ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0015297 // antiporter activity // inferred from electronic annotation","chr12:113737165-113772835 (-) // 93.78 // q24.13"]
["11740311_at",13.390393,11.975768,13.390393,14.04751,14.25304,12.662274,0.0,-0.16108012,0.0,0.069116116,0.09007144,-0.080661535,0.7084968,0.35249132,-1.0569218,-0.07986869,1.0569218,"down","HAS2",3037.0,"0001822 // kidney development // inferred from sequence or structural similarity /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0030213 // hyaluronan biosynthetic process // inferred from direct assay /// 0030213 // hyaluronan biosynthetic process // inferred from electronic annotation /// 0030213 // hyaluronan biosynthetic process // inferred from mutant phenotype /// 0030213 // hyaluronan biosynthetic process // inferred from sequence or structural similarity /// 0035810 // positive regulation of urine volume // inferred from sequence or structural similarity /// 0036120 // cellular response to platelet-derived growth factor stimulus // inferred from direct assay /// 0070295 // renal water absorption // inferred from sequence or structural similarity /// 0071347 // cellular response to interleukin-1 // inferred from expression pattern /// 0071356 // cellular response to tumor necrosis factor // inferred from expression pattern /// 0071498 // cellular response to fluid shear stress // inferred from expression pattern /// 1900625 // positive regulation of monocyte aggregation // inferred from mutant phenotype /// 2000147 // positive regulation of cell motility // inferred from mutant phenotype","0005624 // membrane fraction // inferred from direct assay /// 0005625 // soluble fraction // inferred from direct assay /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0016758 // transferase activity, transferring hexosyl groups // inferred from electronic annotation /// 0050501 // hyaluronan synthase activity // inferred from mutant phenotype /// 0050501 // hyaluronan synthase activity // inferred from sequence or structural similarity /// 0050501 // hyaluronan synthase activity // inferred from electronic annotation","chr8:122625149-122653659 (-) // 96.22 // q24.13"]
["11740100_x_at",129.0835,139.54459,132.79712,140.59381,143.3432,132.98384,-0.077683926,0.034737587,-0.03676462,0.045544624,0.073485374,-0.03473711,0.6725138,0.30190784,-1.03862,-0.054667905,1.03862,"down","ZNF37A",7587.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr10:38383264-38412276 (+) // 57.79 // p11.1"]
["11757751_s_at",72.93515,74.14093,74.721306,76.2621,77.3604,79.52625,-0.049628258,-0.025972366,-0.014723301,0.014723778,0.035352707,0.07518864,0.278629,0.024816137,-1.0510731,-0.07186297,1.0510731,"down","NRP1",8829.0,"0001525 // angiogenesis // inferred from electronic annotation /// 0001569 // patterning of blood vessels // inferred from electronic annotation /// 0001938 // positive regulation of endothelial cell proliferation // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007411 // axon guidance // non-traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007411 // axon guidance // inferred from electronic annotation /// 0007413 // axonal fasciculation // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0009611 // response to wounding // inferred from electronic annotation /// 0009887 // organ morphogenesis // traceable author statement /// 0010595 // positive regulation of endothelial cell migration // traceable author statement /// 0014911 // positive regulation of smooth muscle cell migration // traceable author statement /// 0016358 // dendrite development // inferred from electronic annotation /// 0016477 // cell migration // inferred from electronic annotation /// 0021636 // trigeminal nerve morphogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030517 // negative regulation of axon extension // inferred from electronic annotation /// 0035729 // cellular response to hepatocyte growth factor stimulus // inferred from mutant phenotype /// 0035767 // endothelial cell chemotaxis // inferred from mutant phenotype /// 0038084 // vascular endothelial growth factor signaling pathway // non-traceable author statement /// 0038084 // vascular endothelial growth factor signaling pathway // traceable author statement /// 0038084 // vascular endothelial growth factor signaling pathway // inferred from electronic annotation /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from mutant phenotype /// 0048010 // vascular endothelial growth factor receptor signaling pathway // inferred from mutant phenotype /// 0048010 // vascular endothelial growth factor receptor signaling pathway // traceable author statement /// 0048010 // vascular endothelial growth factor receptor signaling pathway // inferred from electronic annotation /// 0048012 // hepatocyte growth factor receptor signaling pathway // inferred from mutant phenotype /// 0048485 // sympathetic nervous system development // inferred from electronic annotation /// 0048841 // regulation of axon extension involved in axon guidance // inferred from electronic annotation /// 0048843 // negative regulation of axon extension involved in axon guidance // inferred from electronic annotation /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from mutant phenotype /// 0060301 // positive regulation of cytokine activity // traceable author statement /// 0060627 // regulation of vesicle-mediated transport // traceable author statement /// 0060666 // dichotomous subdivision of terminal units involved in salivary gland branching // inferred from electronic annotation /// 0071526 // semaphorin-plexin signaling pathway // non-traceable author statement /// 0071526 // semaphorin-plexin signaling pathway // inferred from electronic annotation","0002116 // semaphorin receptor complex // non-traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005883 // neurofilament // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030426 // growth cone // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // traceable author statement /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043235 // receptor complex // traceable author statement","0004872 // receptor activity // inferred from electronic annotation /// 0005021 // vascular endothelial growth factor-activated receptor activity // non-traceable author statement /// 0005021 // vascular endothelial growth factor-activated receptor activity // inferred from electronic annotation /// 0005021 // vascular endothelial growth factor-activated receptor activity // traceable author statement /// 0008201 // heparin binding // inferred from electronic annotation /// 0015026 // coreceptor activity // traceable author statement /// 0017154 // semaphorin receptor activity // non-traceable author statement /// 0017154 // semaphorin receptor activity // inferred from electronic annotation /// 0019838 // growth factor binding // inferred from physical interaction /// 0019838 // growth factor binding // traceable author statement /// 0019955 // cytokine binding // non-traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation","chr10:33466494-33467764 (-) // 95.38 // p11.22"]
["11754741_x_at",25.023558,26.309895,27.046213,21.591265,24.22252,22.677984,0.023468971,0.095787525,0.13560867,-0.18937016,-0.023468971,-0.118525505,0.2927849,0.028368004,1.1450495,0.19540991,1.1450495,"up","DZANK1",55184.0,"","0005622 // intracellular // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr20:18364720-18447674 (-) // 86.94 // p11.23"]
["11762106_at",14.510713,17.440243,16.215,17.424812,15.852409,15.890554,-0.14563084,0.11967087,0.014579773,0.1183939,-0.018047333,-0.014579773,0.9072785,0.7351169,-1.0226995,-0.032382265,1.0226995,"down","LOC100289580",1.0028958E8,"","","","chr16:88797587-88805596 (+) // 99.61 // q24.3"]
["11740733_a_at",8.911635,7.9887795,5.996098,7.405421,6.605368,6.744831,0.33450794,0.1767931,-0.23715806,0.06739974,-0.097543,-0.06739974,0.8111736,0.5243853,1.089673,0.12389532,1.089673,"up","SLC9C1",285335.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // inferred from electronic annotation /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030317 // sperm motility // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0009434 // microtubule-based flagellum // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0019861 // flagellum // inferred from electronic annotation /// 0020017 // flagellar membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0015297 // antiporter activity // inferred from electronic annotation /// 0015299 // solute:hydrogen antiporter activity // inferred from electronic annotation","chr3:111859751-112013105 (-) // 98.71 // q13.2"]
["11736780_x_at",6.2662096,7.3417883,6.7063055,6.3883786,6.3647947,6.8773704,-0.06289101,0.1656475,0.03503418,-0.03503418,-0.040369987,0.071372986,0.8313836,0.5653786,1.0333105,0.04727388,1.0333105,"up","ZNF486",90649.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:20278029-20311670 (+) // 69.94 // p12"]
["11752244_a_at",47.05897,49.5906,47.163204,45.628437,44.78486,49.931774,-0.001595974,0.074000835,0.001595974,-0.046132565,-0.07305479,0.083892345,0.81861466,0.53958595,1.0255742,0.036431883,1.0255742,"up","KIRREL3",84623.0,"0030097 // hemopoiesis // inferred from sequence or structural similarity /// 0030097 // hemopoiesis // inferred from electronic annotation","0005576 // extracellular region // inferred from sequence or structural similarity /// 0005576 // extracellular region // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from sequence or structural similarity /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0043198 // dendritic shaft // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr11:126300836-126870706 (-) // 98.1 // q24.2"]
["11746063_a_at",40.499622,45.433136,39.190727,41.38779,39.070667,44.237907,-0.015648365,0.15018797,-0.06304455,0.015648365,-0.06747103,0.111726284,0.98948276,0.96502644,1.0026817,0.0038637433,1.0026817,"up","IKBKB",3551.0,"0001782 // B cell homeostasis // inferred from electronic annotation /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0003009 // skeletal muscle contraction // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // non-traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006916 // anti-apoptosis // traceable author statement /// 0006954 // inflammatory response // traceable author statement /// 0007249 // I-kappaB kinase/NF-kappaB cascade // traceable author statement /// 0007252 // I-kappaB phosphorylation // traceable author statement /// 0007252 // I-kappaB phosphorylation // inferred from electronic annotation /// 0008063 // Toll signaling pathway // traceable author statement /// 0009615 // response to virus // traceable author statement /// 0009636 // response to toxin // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0032481 // positive regulation of type I interferon production // traceable author statement /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0042493 // response to drug // inferred from electronic annotation /// 0043122 // regulation of I-kappaB kinase/NF-kappaB cascade // inferred from electronic annotation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045893 // positive regulation of transcription, DNA-dependent // non-traceable author statement /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0051092 // positive regulation of NF-kappaB transcription factor activity // traceable author statement /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from electronic annotation /// 0070423 // nucleotide-binding oligomerization domain containing signaling pathway // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0008385 // IkappaB kinase complex // traceable author statement /// 0008385 // IkappaB kinase complex // inferred from electronic annotation /// 0009898 // internal side of plasma membrane // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0035631 // CD40 receptor complex // inferred from sequence or structural similarity /// 0045121 // membrane raft // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008384 // IkappaB kinase activity // traceable author statement /// 0008384 // IkappaB kinase activity // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr8:42128819-42179979 (+) // 100.0 // p11.21"]
["11762766_at",12.438127,13.515033,12.204205,13.988284,12.654634,12.901671,-0.038842678,0.08095312,-0.066233635,0.13060713,-0.013946056,0.013946056,0.7771152,0.46069977,-1.036397,-0.051576715,1.036397,"down","NGRN",51335.0,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030182 // neuron differentiation // non-traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","","chr15:90809001-90815443 (+) // 97.27 // q26.1"]
["11764017_x_at",963.09436,994.39087,996.92615,1016.29083,988.1939,1062.5564,-0.04797268,-0.0018367767,0.0018367767,0.02959156,-0.010855675,0.09381771,0.58133227,0.19514462,-1.0377859,-0.053508822,1.0377859,"down","APH1A",51107.0,"0001656 // metanephros development // inferred from electronic annotation /// 0006509 // membrane protein ectodomain proteolysis // inferred from direct assay /// 0006915 // apoptotic process // traceable author statement /// 0007219 // Notch signaling pathway // traceable author statement /// 0007219 // Notch signaling pathway // inferred from electronic annotation /// 0007220 // Notch receptor processing // inferred from mutant phenotype /// 0007220 // Notch receptor processing // traceable author statement /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0016485 // protein processing // inferred from direct assay /// 0016485 // protein processing // inferred from electronic annotation /// 0031293 // membrane protein intracellular domain proteolysis // inferred from mutant phenotype /// 0031293 // membrane protein intracellular domain proteolysis // traceable author statement /// 0042987 // amyloid precursor protein catabolic process // inferred from mutant phenotype /// 0042987 // amyloid precursor protein catabolic process // traceable author statement /// 0043085 // positive regulation of catalytic activity // inferred from direct assay /// 0043085 // positive regulation of catalytic activity // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation","0004175 // endopeptidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr1:150237803-150238705 (-) // 97.43 // q21.2"]
["11743684_a_at",503.79672,503.37396,514.7934,498.72675,510.04074,510.69424,-0.008885384,-0.01009655,0.022266388,-0.023477554,0.008885384,0.010732651,0.9624483,0.8842171,1.001652,0.002381369,1.001652,"up","RABGAP1",23637.0,"0007049 // cell cycle // inferred from electronic annotation /// 0007049 // cell cycle // traceable author statement /// 0032313 // regulation of Rab GTPase activity // inferred from electronic annotation /// 0032851 // positive regulation of Rab GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // traceable author statement /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // traceable author statement /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005875 // microtubule associated complex // traceable author statement","0005096 // GTPase activator activity // traceable author statement /// 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005097 // Rab GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0015631 // tubulin binding // traceable author statement","chr9:125703287-125867145 (+) // 97.07 // q33.2"]
["11716709_s_at",422.2943,421.96115,421.26883,428.54456,436.5723,449.62582,-0.010598183,-0.01173687,-0.014105797,0.010598183,0.037373543,0.07987785,0.36870474,0.05345499,-1.0386888,-0.054763444,1.0386888,"down","DDR1 /// MIR4640","100616237 /// 780","0001558 // regulation of cell growth // inferred from electronic annotation /// 0001952 // regulation of cell-matrix adhesion // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0007565 // female pregnancy // inferred from electronic annotation /// 0007566 // embryo implantation // inferred from electronic annotation /// 0007595 // lactation // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0010715 // regulation of extracellular matrix disassembly // inferred from mutant phenotype /// 0010715 // regulation of extracellular matrix disassembly // inferred from electronic annotation /// 0014909 // smooth muscle cell migration // inferred from mutant phenotype /// 0014909 // smooth muscle cell migration // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0031100 // organ regeneration // inferred from electronic annotation /// 0038063 // collagen-activated tyrosine kinase receptor signaling pathway // inferred from direct assay /// 0038063 // collagen-activated tyrosine kinase receptor signaling pathway // inferred from mutant phenotype /// 0038063 // collagen-activated tyrosine kinase receptor signaling pathway // inferred from electronic annotation /// 0038083 // peptidyl-tyrosine autophosphorylation // inferred from direct assay /// 0043583 // ear development // inferred from electronic annotation /// 0043588 // skin development // inferred from electronic annotation /// 0044319 // wound healing, spreading of cells // inferred from mutant phenotype /// 0044319 // wound healing, spreading of cells // inferred from electronic annotation /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0060444 // branching involved in mammary gland duct morphogenesis // inferred from electronic annotation /// 0060749 // mammary gland alveolus development // inferred from electronic annotation /// 0061302 // smooth muscle cell-matrix adhesion // inferred from mutant phenotype /// 0061302 // smooth muscle cell-matrix adhesion // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // traceable author statement /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005518 // collagen binding // inferred from direct assay /// 0005518 // collagen binding // inferred from mutant phenotype /// 0005518 // collagen binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0038062 // protein tyrosine kinase collagen receptor activity // inferred from direct assay","chr6:30852326-30867933 (+) // 95.3 // p21.33"]
["11743998_s_at",152.90004,165.24661,145.72034,159.2646,163.31429,156.58984,-0.046619415,0.06541252,-0.1160059,0.012217522,0.04844284,-0.012217522,0.7601963,0.43266952,-1.0342263,-0.048551895,1.0342263,"down","SSBP4",170463.0,"","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003697 // single-stranded DNA binding // inferred from electronic annotation","chr19:18530106-18545459 (+) // 94.2 // p13.11"]
["11738869_at",25.130096,27.223082,26.010653,30.57917,24.531569,23.480968,-0.024843216,0.09057093,0.024843216,0.2582898,-0.059619904,-0.12276745,0.99112535,0.9700884,1.0033948,0.004889427,1.0033948,"up","TBX1",6899.0,"0001525 // angiogenesis // inferred from sequence or structural similarity /// 0001568 // blood vessel development // inferred from sequence or structural similarity /// 0001708 // cell fate specification // inferred from sequence or structural similarity /// 0001755 // neural crest cell migration // inferred from sequence or structural similarity /// 0001934 // positive regulation of protein phosphorylation // inferred from sequence or structural similarity /// 0001945 // lymph vessel development // inferred from sequence or structural similarity /// 0002053 // positive regulation of mesenchymal cell proliferation // inferred from sequence or structural similarity /// 0003007 // heart morphogenesis // inferred from sequence or structural similarity /// 0003148 // outflow tract septum morphogenesis // inferred from sequence or structural similarity /// 0003151 // outflow tract morphogenesis // inferred from sequence or structural similarity /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0006357 // regulation of transcription from RNA polymerase II promoter // non-traceable author statement /// 0007368 // determination of left/right symmetry // inferred from sequence or structural similarity /// 0007389 // pattern specification process // inferred from sequence or structural similarity /// 0007498 // mesoderm development // inferred from sequence or structural similarity /// 0007507 // heart development // inferred from mutant phenotype /// 0007517 // muscle organ development // inferred from sequence or structural similarity /// 0007605 // sensory perception of sound // inferred from sequence or structural similarity /// 0008283 // cell proliferation // inferred from sequence or structural similarity /// 0008284 // positive regulation of cell proliferation // inferred from sequence or structural similarity /// 0009952 // anterior/posterior pattern specification // inferred from sequence or structural similarity /// 0021644 // vagus nerve morphogenesis // inferred from sequence or structural similarity /// 0030855 // epithelial cell differentiation // inferred from sequence or structural similarity /// 0030878 // thyroid gland development // inferred from sequence or structural similarity /// 0035176 // social behavior // inferred from sequence or structural similarity /// 0035909 // aorta morphogenesis // inferred from sequence or structural similarity /// 0042471 // ear morphogenesis // inferred from sequence or structural similarity /// 0042472 // inner ear morphogenesis // inferred from sequence or structural similarity /// 0042473 // outer ear morphogenesis // inferred from sequence or structural similarity /// 0042474 // middle ear morphogenesis // inferred from sequence or structural similarity /// 0042475 // odontogenesis of dentin-containing tooth // inferred from sequence or structural similarity /// 0042693 // muscle cell fate commitment // inferred from sequence or structural similarity /// 0043410 // positive regulation of MAPK cascade // inferred from sequence or structural similarity /// 0043587 // tongue morphogenesis // inferred from sequence or structural similarity /// 0044344 // cellular response to fibroblast growth factor stimulus // inferred from sequence or structural similarity /// 0045596 // negative regulation of cell differentiation // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0048384 // retinoic acid receptor signaling pathway // inferred from sequence or structural similarity /// 0048514 // blood vessel morphogenesis // inferred from sequence or structural similarity /// 0048538 // thymus development // inferred from mutant phenotype /// 0048644 // muscle organ morphogenesis // inferred from sequence or structural similarity /// 0048701 // embryonic cranial skeleton morphogenesis // inferred from sequence or structural similarity /// 0048703 // embryonic viscerocranium morphogenesis // inferred from mutant phenotype /// 0048752 // semicircular canal morphogenesis // inferred from sequence or structural similarity /// 0048844 // artery morphogenesis // inferred from sequence or structural similarity /// 0050679 // positive regulation of epithelial cell proliferation // inferred from sequence or structural similarity /// 0060017 // parathyroid gland development // inferred from mutant phenotype /// 0060023 // soft palate development // inferred from mutant phenotype /// 0060037 // pharyngeal system development // inferred from mutant phenotype /// 0060325 // face morphogenesis // inferred from sequence or structural similarity /// 0060415 // muscle tissue morphogenesis // inferred from sequence or structural similarity /// 0060982 // coronary artery morphogenesis // inferred from sequence or structural similarity /// 0070166 // enamel mineralization // inferred from sequence or structural similarity /// 0071300 // cellular response to retinoic acid // inferred from sequence or structural similarity /// 0090103 // cochlea morphogenesis // inferred from sequence or structural similarity /// 0097152 // mesenchymal cell apoptotic process // inferred from sequence or structural similarity /// 2000027 // regulation of organ morphogenesis // inferred from sequence or structural similarity /// 2001037 // positive regulation of tongue muscle cell differentiation // inferred from sequence or structural similarity /// 2001054 // negative regulation of mesenchymal cell apoptotic process // inferred from sequence or structural similarity","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0046983 // protein dimerization activity // traceable author statement","chr22:19744225-19771110 (+) // 70.68 // q11.21"]
["11725450_a_at",64.296364,60.2555,56.94718,49.94691,55.071777,58.1947,0.15948105,0.06583643,-0.015631676,-0.20486069,-0.06394291,0.015631676,0.5078167,0.13286048,1.1128707,0.15428597,1.1128707,"up","TMEM45B",120224.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr11:129722367-129729899 (+) // 61.82 // q24.3"]
["11733642_s_at",162.83147,162.20729,159.54062,174.11386,190.87398,167.56284,-0.020661354,-0.026201725,-0.050117016,0.0759902,0.20858002,0.020661354,0.4192104,0.07651513,-1.0973856,-0.1340706,1.0973856,"down","NECAP2",55707.0,"0006810 // transport // inferred from electronic annotation /// 0006897 // endocytosis // inferred from sequence or structural similarity /// 0006897 // endocytosis // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0005622 // intracellular // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005905 // coated pit // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0030125 // clathrin vesicle coat // inferred from sequence or structural similarity /// 0030665 // clathrin coated vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","","chr1:16767166-16786582 (+) // 96.04 // p36.13"]
["11742854_x_at",593.3741,552.04156,628.9908,537.87494,562.89075,531.2073,0.09012604,-0.01403904,0.17422295,-0.051545143,0.01403904,-0.06954098,0.48885345,0.11844515,1.0860715,0.11911907,1.0860715,"up","UGDH",7358.0,"0001702 // gastrulation with mouth forming second // inferred from electronic annotation /// 0006011 // UDP-glucose metabolic process // traceable author statement /// 0006024 // glycosaminoglycan biosynthetic process // traceable author statement /// 0006065 // UDP-glucuronate biosynthetic process // inferred from electronic annotation /// 0006065 // UDP-glucuronate biosynthetic process // traceable author statement /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0003979 // UDP-glucose 6-dehydrogenase activity // traceable author statement /// 0003979 // UDP-glucose 6-dehydrogenase activity // inferred from electronic annotation /// 0009055 // electron carrier activity // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016616 // oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0051287 // NAD binding // inferred from electronic annotation","chr4:39500374-39529211 (-) // 89.42 // p14"]
["11744167_a_at",268.3981,262.5358,260.2768,270.0389,271.55475,278.61783,-0.0043964386,-0.03625679,-0.048724174,0.0043964386,0.012472153,0.049516678,0.3688475,0.053555507,-1.0366442,-0.051920842,1.0366442,"down","DPP3",10072.0,"0006508 // proteolysis // inferred from electronic annotation /// 0006508 // proteolysis // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay","0004177 // aminopeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008239 // dipeptidyl-peptidase activity // inferred from electronic annotation /// 0008239 // dipeptidyl-peptidase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:66247481-66277128 (+) // 91.11 // q13.2"]
["11715804_s_at",126.1376,124.61993,132.24925,113.92169,130.32384,116.35578,0.008731365,-0.008731365,0.07699299,-0.13822412,0.055834293,-0.10772419,0.62922454,0.24672423,1.063659,0.089035645,1.063659,"up","MIR3661 /// PPP2CA","100500905 /// 5515","0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0000188 // inactivation of MAPK activity // non-traceable author statement /// 0001932 // regulation of protein phosphorylation // inferred from electronic annotation /// 0006275 // regulation of DNA replication // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006470 // protein dephosphorylation // traceable author statement /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0006672 // ceramide metabolic process // non-traceable author statement /// 0006917 // induction of apoptosis // traceable author statement /// 0007126 // meiosis // inferred from electronic annotation /// 0007498 // mesoderm development // inferred from electronic annotation /// 0008380 // RNA splicing // non-traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0010033 // response to organic substance // non-traceable author statement /// 0010467 // gene expression // traceable author statement /// 0010469 // regulation of receptor activity // inferred from electronic annotation /// 0010719 // negative regulation of epithelial to mesenchymal transition // inferred from mutant phenotype /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019932 // second-messenger-mediated signaling // non-traceable author statement /// 0030111 // regulation of Wnt receptor signaling pathway // non-traceable author statement /// 0030155 // regulation of cell adhesion // non-traceable author statement /// 0030308 // negative regulation of cell growth // non-traceable author statement /// 0031952 // regulation of protein autophosphorylation // inferred from electronic annotation /// 0040008 // regulation of growth // non-traceable author statement /// 0042176 // regulation of protein catabolic process // inferred from electronic annotation /// 0042518 // negative regulation of tyrosine phosphorylation of Stat3 protein // non-traceable author statement /// 0045595 // regulation of cell differentiation // non-traceable author statement /// 0070208 // protein heterotrimerization // inferred from electronic annotation /// 0071902 // positive regulation of protein serine/threonine kinase activity // inferred from mutant phenotype","0000159 // protein phosphatase type 2A complex // inferred from direct assay /// 0000159 // protein phosphatase type 2A complex // traceable author statement /// 0000159 // protein phosphatase type 2A complex // inferred from electronic annotation /// 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000922 // spindle pole // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // non-traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // non-traceable author statement /// 0016020 // membrane // non-traceable author statement","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation","chr5:133531482-133562009 (-) // 90.62 // q31.1"]
["11724323_a_at",186.80536,190.58922,199.59584,220.85912,203.79297,202.13641,-0.10466957,-0.07573843,-0.009123325,0.13692045,0.020899296,0.009123802,0.416024,0.074821696,-1.0858501,-0.11882498,1.0858501,"down","SLC12A6",9990.0,"0001525 // angiogenesis // non-traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from direct assay /// 0006811 // ion transport // traceable author statement /// 0006811 // ion transport // inferred from electronic annotation /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0071477 // cellular hypotonic salinity response // inferred from direct assay","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from sequence or structural similarity /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation /// 0015293 // symporter activity // inferred from electronic annotation /// 0015377 // cation:chloride symporter activity // inferred from electronic annotation /// 0015379 // potassium:chloride symporter activity // inferred from direct assay /// 0015379 // potassium:chloride symporter activity // inferred from electronic annotation","chr15:34521985-34629961 (-) // 88.81 // q14"]
["11757626_x_at",21.971762,24.197268,26.772892,29.00775,29.355509,26.669859,-0.282341,-0.14314747,0.0027813911,0.11844683,0.13563967,-0.0027813911,0.41324762,0.073360294,-1.1685106,-0.22467077,1.1685106,"down","SLC16A4",9122.0,"0006810 // transport // inferred from electronic annotation /// 0015718 // monocarboxylic acid transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008028 // monocarboxylic acid transmembrane transporter activity // traceable author statement /// 0015293 // symporter activity // inferred from electronic annotation","chr1:110905474-110907588 (-) // 77.35 // p13.3"]
["AFFX-DapX-3_at",622.5679,602.84705,665.0937,608.7364,618.1166,619.849,0.008333206,-0.038105965,0.10365963,-0.024080276,-0.0020189285,0.0020189285,0.7910886,0.4851999,1.0228933,0.032655675,1.0228933,"up",0.10365963,"","","0001680 // tRNA 3'-terminal CCA addition // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006396 // RNA processing // inferred from electronic annotation /// 0006464 // cellular protein modification process // inferred from electronic annotation /// 0008033 // tRNA processing // inferred from electronic annotation /// 0008652 // cellular amino acid biosynthetic process // inferred from electronic annotation /// 0009058 // biosynthetic process // inferred from electronic annotation /// 0009085 // lysine biosynthetic process // inferred from electronic annotation /// 0009089 // lysine biosynthetic process via diaminopimelate // inferred from electronic annotation /// 0019242 // methylglyoxal biosynthetic process // inferred from electronic annotation /// 0019877 // diaminopimelate biosynthetic process // inferred from electronic annotation /// 0042245 // RNA repair // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004077 // biotin-[acetyl-CoA-carboxylase] ligase activity // inferred from electronic annotation /// 0004810 // tRNA adenylyltransferase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008839 // dihydrodipicolinate reductase activity // inferred from electronic annotation /// 0008929 // methylglyoxal synthase activity // inferred from electronic annotation /// 0016437 // tRNA cytidylyltransferase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0016779 // nucleotidyltransferase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0052927 // CTP:tRNA cytidylyltransferase activity // inferred from electronic annotation /// 0052928 // CTP:3'-cytidine-tRNA cytidylyltransferase activity // inferred from electronic annotation /// 0052929 // ATP:3'-cytidine-cytidine-tRNA adenylyltransferase activity // inferred from electronic annotation /// 0070402 // NADPH binding // inferred from electronic annotation"]
["11729698_a_at",295.79584,283.55405,288.97424,270.7963,278.29294,283.44238,0.06126213,2.8419495E-4,0.027601242,-0.06613159,-0.026735306,-2.8419495E-4,0.42495614,0.079769075,1.0430195,0.060766175,1.0430195,"up","PPP2R4",5524.0,"0000413 // protein peptidyl-prolyl isomerization // inferred from electronic annotation /// 0006200 // ATP catabolic process // inferred from direct assay /// 0006457 // protein folding // inferred from electronic annotation /// 0032515 // negative regulation of phosphoprotein phosphatase activity // inferred from direct assay /// 0032516 // positive regulation of phosphoprotein phosphatase activity // inferred from direct assay /// 0035307 // positive regulation of protein dephosphorylation // inferred from direct assay /// 0035308 // negative regulation of protein dephosphorylation // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0043666 // regulation of phosphoprotein phosphatase activity // inferred from direct assay","0000159 // protein phosphatase type 2A complex // traceable author statement /// 0005625 // soluble fraction // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0034704 // calcium channel complex // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003755 // peptidyl-prolyl cis-trans isomerase activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0008160 // protein tyrosine phosphatase activator activity // inferred from direct assay /// 0008160 // protein tyrosine phosphatase activator activity // traceable author statement /// 0008601 // protein phosphatase type 2A regulator activity // inferred from direct assay /// 0008601 // protein phosphatase type 2A regulator activity // traceable author statement /// 0016853 // isomerase activity // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from direct assay /// 0019211 // phosphatase activator activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046982 // protein heterodimerization activity // traceable author statement /// 0051721 // protein phosphatase 2A binding // inferred from direct assay","chr9:131873594-131911223 (+) // 95.36 // q34.11"]
["11737692_a_at",323.0405,295.09433,295.7323,289.842,271.91507,279.20724,0.14349365,0.012954712,0.016070366,-0.012954712,-0.105065346,-0.066884995,0.42243513,0.07823538,1.0860882,0.11914124,1.0860882,"up","PLEKHG4",25894.0,"0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation","chr16:67313491-67323402 (+) // 99.16 // q22.1"]
["11730290_x_at",51.594933,52.565937,52.193066,53.6968,49.99722,52.70492,-0.021763802,0.0051350594,-0.0051350594,0.035842896,-0.06714535,0.008944511,0.99836385,0.99533206,1.0001373,1.9811041E-4,1.0001373,"up","ARHGAP5",394.0,"0002053 // positive regulation of mesenchymal cell proliferation // inferred from electronic annotation /// 0006184 // GTP catabolic process // traceable author statement /// 0007155 // cell adhesion // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007266 // Rho protein signal transduction // traceable author statement /// 0008361 // regulation of cell size // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0032321 // positive regulation of Rho GTPase activity // traceable author statement /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0003924 // GTPase activity // traceable author statement /// 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005100 // Rho GTPase activator activity // traceable author statement /// 0005525 // GTP binding // inferred from electronic annotation /// 0042169 // SH2 domain binding // inferred from physical interaction","chr14:32546494-32628932 (+) // 98.56 // q12"]
["11763004_x_at",22.057505,20.942558,19.225718,23.069609,20.858488,21.457945,0.057294846,-0.017537117,-0.14093733,0.122018814,-0.023340225,0.017537117,0.72164404,0.37234792,-1.0515119,-0.07246515,1.0515119,"down","NPHP3",27031.0,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0045494 // photoreceptor cell maintenance // inferred from mutant phenotype /// 0048496 // maintenance of organ identity // inferred from mutant phenotype /// 0048496 // maintenance of organ identity // inferred from electronic annotation /// 0060271 // cilium morphogenesis // inferred from sequence or structural similarity /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from direct assay /// 2000095 // regulation of Wnt receptor signaling pathway, planar cell polarity pathway // inferred from sequence or structural similarity","0005871 // kinesin complex // inferred from electronic annotation /// 0005929 // cilium // inferred from direct assay /// 0005929 // cilium // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0072372 // primary cilium // inferred from direct assay","0003777 // microtubule motor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr3:132440288-132441258 (-) // 71.92 // q22.1"]
["11726941_at",65.48608,68.37405,64.070885,58.442486,55.099873,58.086704,0.09784508,0.1601057,0.06632519,-0.066325665,-0.15129471,-0.07513523,0.16480285,0.005948851,1.1532276,0.20567723,1.1532276,"up","ZKSCAN2",342357.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016032 // viral reproduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:25247323-25268880 (-) // 89.18 // p12.1"]
["11741271_a_at",485.7125,506.10822,487.55347,510.29367,520.4531,506.05405,-0.05926609,7.724762E-5,-0.053808212,0.011959076,0.04039955,-7.724762E-5,0.406556,0.069886975,-1.0389259,-0.05509274,1.0389259,"down","GOPC",57120.0,"0006810 // transport // inferred from electronic annotation /// 0006888 // ER to Golgi vesicle-mediated transport // non-traceable author statement /// 0006893 // Golgi to plasma membrane transport // non-traceable author statement /// 0007289 // spermatid nucleus differentiation // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0043004 // cytoplasmic sequestering of CFTR protein // non-traceable author statement /// 0045176 // apical protein localization // non-traceable author statement /// 0051260 // protein homooligomerization // inferred from physical interaction","0000139 // Golgi membrane // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // non-traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030140 // trans-Golgi network transport vesicle // inferred from direct assay /// 0030140 // trans-Golgi network transport vesicle // non-traceable author statement /// 0030425 // dendrite // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0005083 // small GTPase regulator activity // inferred from electronic annotation /// 0005109 // frizzled binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0042980 // cystic fibrosis transmembrane conductance regulator binding // inferred from physical interaction","chr6:117881431-117923693 (-) // 99.98 // q22.1"]
["11740202_at",86.037674,93.97291,78.207375,90.34872,94.20736,82.77979,-0.03526783,0.09200859,-0.17293167,0.03526783,0.095603466,-0.09095764,0.85206413,0.6100922,-1.0367261,-0.05203481,1.0367261,"down","KISS1R",84634.0,"0000186 // activation of MAPKK activity // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // non-traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007218 // neuropeptide signaling pathway // inferred from direct assay /// 0007610 // behavior // non-traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0019722 // calcium-mediated signaling // inferred from electronic annotation /// 0046887 // positive regulation of hormone secretion // inferred from electronic annotation /// 0050482 // arachidonic acid secretion // inferred from electronic annotation /// 0050806 // positive regulation of synaptic transmission // inferred from electronic annotation /// 0051496 // positive regulation of stress fiber assembly // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008188 // neuropeptide receptor activity // inferred from direct assay /// 0008528 // G-protein coupled peptide receptor activity // inferred from electronic annotation /// 0042923 // neuropeptide binding // inferred from electronic annotation","chr19:917341-921014 (+) // 94.31 // p13.3"]
["11733471_at",17.615341,17.43872,17.779707,19.738876,16.618568,20.18583,-0.006699562,-0.02123785,0.006699562,0.1575079,-0.09073591,0.18981075,0.71155244,0.3568048,-1.0662951,-0.09260683,1.0662951,"down","PLEKHG4B",153478.0,"0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation","chr5:140372-190085 (+) // 77.03 // p15.33"]
["11736633_at",156.52283,151.2924,163.30824,148.14401,152.90675,156.91562,0.016860485,-0.032172203,0.0780859,-0.06251192,-0.016860485,0.020477295,0.7180106,0.3670365,1.0285105,0.040556453,1.0285105,"up","AAK1",22848.0,"0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006897 // endocytosis // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0032880 // regulation of protein localization // inferred from direct assay /// 0045747 // positive regulation of Notch signaling pathway // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from sequence or structural similarity /// 0050821 // protein stabilization // inferred from direct assay /// 2000369 // regulation of clathrin-mediated endocytosis // inferred from direct assay /// 2000369 // regulation of clathrin-mediated endocytosis // inferred from mutant phenotype","0005886 // plasma membrane // inferred from electronic annotation /// 0005905 // coated pit // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0019897 // extrinsic to plasma membrane // inferred from sequence or structural similarity /// 0030136 // clathrin-coated vesicle // inferred from sequence or structural similarity /// 0031252 // cell leading edge // inferred from sequence or structural similarity /// 0043195 // terminal button // inferred from sequence or structural similarity","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from sequence or structural similarity /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005112 // Notch binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0035612 // AP-2 adaptor complex binding // inferred from direct assay","chr2:69685129-69870977 (-) // 85.73 // p13.3"]
["11729119_a_at",1266.6061,1229.6105,1302.2065,1135.3655,1163.1102,1166.2976,0.08089924,0.038132668,0.12088966,-0.076911926,-0.04208088,-0.038132668,0.18070155,0.007912641,1.0960768,0.13234895,1.0960768,"up","HSPA1A /// HSPA1B","3303 /// 3304","0006402 // mRNA catabolic process // inferred from direct assay /// 0006916 // anti-apoptosis // traceable author statement /// 0006950 // response to stress // inferred from electronic annotation /// 0006986 // response to unfolded protein // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0030308 // negative regulation of cell growth // inferred from mutant phenotype /// 0042026 // protein refolding // inferred from direct assay /// 0090084 // negative regulation of inclusion body assembly // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // traceable author statement /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0008180 // signalosome // inferred from direct assay /// 0016234 // inclusion body // inferred from direct assay /// 0016235 // aggresome // inferred from direct assay /// 0016607 // nuclear speck // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0044183 // protein binding involved in protein folding // inferred from direct assay /// 0047485 // protein N-terminus binding // inferred from physical interaction /// 0051082 // unfolded protein binding // traceable author statement","chr6:31795513-31798031 (+) // 94.62 // p21.33"]
["11738458_at",7.217632,6.508968,7.1031904,6.8936763,7.4772897,7.4131765,0.011529207,-0.13756752,-0.011529207,-0.054722786,0.06251907,0.05009532,0.69645137,0.33438385,-1.0461959,-0.06515297,1.0461959,"down","ZIM3",114026.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:57645463-57656570 (-) // 77.81 // q13.43"]
["11750909_a_at",122.96406,126.46117,125.207306,111.697525,94.70731,110.78588,0.069319725,0.10977745,0.095401764,-0.069319725,-0.30736923,-0.08114338,0.31883928,0.03568263,1.1843623,0.24411047,1.1843623,"up","SLC16A7",9194.0,"0006810 // transport // inferred from electronic annotation /// 0006848 // pyruvate transport // traceable author statement /// 0015711 // organic anion transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005477 // pyruvate secondary active transmembrane transporter activity // traceable author statement /// 0015293 // symporter activity // inferred from electronic annotation /// 0015355 // secondary active monocarboxylate transmembrane transporter activity // inferred from electronic annotation","chr12:60083133-60173477 (+) // 89.21 // q14.1"]
["11744291_x_at",406.63083,396.49002,394.91064,423.44965,403.68427,427.16858,0.0052461624,-0.031188965,-0.03694725,0.06371689,-0.0052461624,0.07633209,0.42926297,0.08247766,-1.046736,-0.06589762,1.046736,"down","BRMS1",25855.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0019987 // negative regulation of anti-apoptosis // inferred from direct assay /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0090312 // positive regulation of protein deacetylation // inferred from direct assay /// 2000210 // positive regulation of anoikis // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0051059 // NF-kappaB binding // inferred from direct assay","chr11:66104809-66112596 (-) // 94.12 // q13.2"]
["11734815_a_at",11.570252,10.368459,10.350117,8.953944,10.698378,9.108367,0.1594963,0.0012774467,-0.0012772083,-0.21032906,0.04646778,-0.18565989,0.540791,0.15699293,1.1248032,0.16967258,1.1248032,"up","GSG1",83445.0,"","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr12:13237041-13248740 (-) // 91.68 // p13.1"]
["11743628_at",59.644566,56.299664,58.309372,55.45002,48.5367,56.356598,0.08253574,-7.286072E-4,0.0498724,-0.022667408,-0.21477938,7.29084E-4,0.5486142,0.16529001,1.0888454,0.12279909,1.0888454,"up","IRS1",3667.0,"0002053 // positive regulation of mesenchymal cell proliferation // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from sequence or structural similarity /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // non-traceable author statement /// 0008286 // insulin receptor signaling pathway // inferred from direct assay /// 0008286 // insulin receptor signaling pathway // inferred from mutant phenotype /// 0008286 // insulin receptor signaling pathway // inferred from physical interaction /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008286 // insulin receptor signaling pathway // inferred from electronic annotation /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0010907 // positive regulation of glucose metabolic process // inferred from mutant phenotype /// 0014065 // phosphatidylinositol 3-kinase cascade // inferred from direct assay /// 0016042 // lipid catabolic process // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0030879 // mammary gland development // inferred from electronic annotation /// 0032000 // positive regulation of fatty acid beta-oxidation // inferred from mutant phenotype /// 0032868 // response to insulin stimulus // inferred from direct assay /// 0032869 // cellular response to insulin stimulus // inferred from mutant phenotype /// 0032869 // cellular response to insulin stimulus // inferred from electronic annotation /// 0034504 // protein localization to nucleus // inferred from electronic annotation /// 0042327 // positive regulation of phosphorylation // inferred from electronic annotation /// 0042593 // glucose homeostasis // traceable author statement /// 0043434 // response to peptide hormone stimulus // inferred from sequence or structural similarity /// 0043434 // response to peptide hormone stimulus // inferred from electronic annotation /// 0043552 // positive regulation of phosphatidylinositol 3-kinase activity // inferred from sequence or structural similarity /// 0043552 // positive regulation of phosphatidylinositol 3-kinase activity // inferred from electronic annotation /// 0045725 // positive regulation of glycogen biosynthetic process // inferred from mutant phenotype /// 0045725 // positive regulation of glycogen biosynthetic process // non-traceable author statement /// 0046326 // positive regulation of glucose import // inferred from mutant phenotype /// 0046627 // negative regulation of insulin receptor signaling pathway // inferred from sequence or structural similarity /// 0046627 // negative regulation of insulin receptor signaling pathway // inferred from electronic annotation /// 0046628 // positive regulation of insulin receptor signaling pathway // inferred from sequence or structural similarity /// 0046628 // positive regulation of insulin receptor signaling pathway // inferred from electronic annotation /// 0046676 // negative regulation of insulin secretion // inferred from direct assay /// 0046676 // negative regulation of insulin secretion // inferred from electronic annotation /// 0048009 // insulin-like growth factor receptor signaling pathway // inferred from physical interaction /// 0048009 // insulin-like growth factor receptor signaling pathway // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0051291 // protein heterooligomerization // inferred from electronic annotation /// 0060397 // JAK-STAT cascade involved in growth hormone signaling pathway // traceable author statement /// 0070094 // positive regulation of glucagon secretion // inferred from electronic annotation /// 0090275 // negative regulation of somatostatin secretion // inferred from electronic annotation","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005792 // microsome // inferred from sequence or structural similarity /// 0005792 // microsome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005899 // insulin receptor complex // inferred from sequence or structural similarity /// 0005899 // insulin receptor complex // inferred from electronic annotation /// 0005901 // caveola // inferred from direct assay","0004871 // signal transducer activity // traceable author statement /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005010 // insulin-like growth factor-activated receptor activity // inferred from electronic annotation /// 0005068 // transmembrane receptor protein tyrosine kinase adaptor activity // inferred from sequence or structural similarity /// 0005068 // transmembrane receptor protein tyrosine kinase adaptor activity // inferred from electronic annotation /// 0005068 // transmembrane receptor protein tyrosine kinase adaptor activity // traceable author statement /// 0005080 // protein kinase C binding // inferred from sequence or structural similarity /// 0005080 // protein kinase C binding // inferred from electronic annotation /// 0005158 // insulin receptor binding // inferred from physical interaction /// 0005158 // insulin receptor binding // inferred from electronic annotation /// 0005159 // insulin-like growth factor receptor binding // inferred from physical interaction /// 0005159 // insulin-like growth factor receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0042169 // SH2 domain binding // inferred from sequence or structural similarity /// 0042169 // SH2 domain binding // inferred from electronic annotation /// 0043548 // phosphatidylinositol 3-kinase binding // inferred from physical interaction /// 0043548 // phosphatidylinositol 3-kinase binding // inferred from sequence or structural similarity /// 0043548 // phosphatidylinositol 3-kinase binding // inferred from electronic annotation","chr2:227596033-227664496 (-) // 95.08 // q36.3"]
["11723936_a_at",56.935154,62.58166,54.580105,64.74735,56.309193,59.17374,-0.02781868,0.10860157,-0.08876324,0.15768242,-0.043767452,0.02781868,0.83731365,0.5798545,-1.0351965,-0.049904704,1.0351965,"down","SNX1",6642.0,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from mutant phenotype /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006897 // endocytosis // traceable author statement /// 0007154 // cell communication // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016197 // endosomal transport // inferred from electronic annotation /// 0034498 // early endosome to Golgi transport // inferred from mutant phenotype /// 0045732 // positive regulation of protein catabolic process // inferred from electronic annotation","0005622 // intracellular // inferred from mutant phenotype /// 0005622 // intracellular // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from direct assay /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from direct assay /// 0031901 // early endosome membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008289 // lipid binding // inferred from electronic annotation /// 0008565 // protein transporter activity // inferred from electronic annotation /// 0035091 // phosphatidylinositol binding // inferred from direct assay /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation","chr15:64388082-64436433 (+) // 65.62 // q22.31"]
["11728012_at",91.99441,98.98074,98.256096,83.30565,93.21024,92.95181,-0.016940117,0.08866215,0.078061104,-0.16007137,0.002002716,-0.002002716,0.5617761,0.17674336,1.0742165,0.10328477,1.0742165,"up","PRTG",283659.0,"0007275 // multicellular organismal development // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr15:55903737-56035317 (-) // 93.1 // q21.3"]
["11721045_x_at",812.4052,803.62103,890.0737,870.2715,860.2393,847.4184,-0.07170677,-0.0873909,0.06001854,0.02755928,0.010831833,-0.010831833,0.75866324,0.42922568,-1.0296919,-0.042212773,1.0296919,"down","UNC50",25972.0,"0006810 // transport // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005637 // nuclear inner membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation","chr2:99225051-99234978 (+) // 95.53 // q11.2"]
["11718044_s_at",48.835697,61.788746,55.915646,56.01381,58.34018,59.789753,-0.22719955,0.11220837,-0.031883717,-0.029353619,0.029353619,0.064762115,0.81303704,0.5276327,-1.0501138,-0.07054567,1.0501138,"down","RAB11B",9230.0,"0006184 // GTP catabolic process // inferred from direct assay /// 0006184 // GTP catabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from direct assay /// 0003924 // GTPase activity // traceable author statement /// 0005525 // GTP binding // inferred from direct assay /// 0005525 // GTP binding // inferred from electronic annotation /// 0019003 // GDP binding // inferred from direct assay","chr19:8455081-8469318 (+) // 92.83 // p13.2"]
["11715911_at",37.019,33.511604,29.813412,39.855663,37.627823,47.03066,-0.011766911,-0.15537214,-0.3240714,0.094751835,0.011766911,0.33356857,0.42295817,0.078512065,-1.2400795,-0.31043264,1.2400795,"down","MYO6",4646.0,"0006605 // protein targeting // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from sequence or structural similarity /// 0006897 // endocytosis // inferred from mutant phenotype /// 0006897 // endocytosis // inferred from sequence or structural similarity /// 0006897 // endocytosis // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007268 // synaptic transmission // inferred from electronic annotation /// 0007416 // synapse assembly // inferred from electronic annotation /// 0007605 // sensory perception of sound // inferred from electronic annotation /// 0007605 // sensory perception of sound // inferred from direct assay /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0014047 // glutamate secretion // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016358 // dendrite development // inferred from electronic annotation /// 0030048 // actin filament-based movement // inferred from sequence or structural similarity /// 0030048 // actin filament-based movement // non-traceable author statement /// 0030330 // DNA damage response, signal transduction by p53 class mediator // inferred from direct assay /// 0042472 // inner ear morphogenesis // inferred from electronic annotation /// 0042491 // auditory receptor cell differentiation // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0048167 // regulation of synaptic plasticity // inferred from electronic annotation /// 0048839 // inner ear development // inferred from electronic annotation /// 0051046 // regulation of secretion // inferred from mutant phenotype /// 0071257 // cellular response to electrical stimulus // inferred from electronic annotation","0001726 // ruffle // inferred from direct assay /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005902 // microvillus // inferred from electronic annotation /// 0005905 // coated pit // inferred from electronic annotation /// 0005938 // cell cortex // inferred from sequence or structural similarity /// 0012506 // vesicle membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from direct assay /// 0016459 // myosin complex // inferred from electronic annotation /// 0016461 // unconventional myosin complex // traceable author statement /// 0016461 // unconventional myosin complex // non-traceable author statement /// 0016591 // DNA-directed RNA polymerase II, holoenzyme // inferred from direct assay /// 0030139 // endocytic vesicle // inferred from sequence or structural similarity /// 0030139 // endocytic vesicle // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030665 // clathrin coated vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031941 // filamentous actin // inferred from direct assay /// 0031941 // filamentous actin // inferred from sequence or structural similarity /// 0031965 // nuclear membrane // inferred from direct assay /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from electronic annotation /// 0045334 // clathrin-coated endocytic vesicle // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003774 // motor activity // inferred from sequence or structural similarity /// 0003774 // motor activity // inferred from electronic annotation /// 0003779 // actin binding // traceable author statement /// 0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from sequence or structural similarity /// 0005516 // calmodulin binding // traceable author statement /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0043531 // ADP binding // inferred from sequence or structural similarity /// 0051015 // actin filament binding // inferred from direct assay /// 0051015 // actin filament binding // inferred from sequence or structural similarity /// 0060001 // minus-end directed microfilament motor activity // non-traceable author statement","chr6:76458892-76629254 (+) // 91.39 // q14.1"]
["11755543_a_at",79.45232,68.3555,73.3829,63.98361,69.222,56.134758,0.20794535,-0.009086132,0.09330034,-0.104441166,0.009086609,-0.29324913,0.46448123,0.10394362,1.1703346,0.22692102,1.1703346,"up","TMC5",79838.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr16:19467838-19509462 (+) // 97.21 // p12.3"]
["11745102_a_at",16.055267,16.447363,14.035293,19.047058,14.476092,15.941882,0.0051124096,0.039922,-0.1888752,0.25163388,-0.14426208,-0.0051124096,0.8370326,0.5790683,-1.0585089,-0.08203336,1.0585089,"down","NOX4",50507.0,"0000902 // cell morphogenesis // inferred from sequence or structural similarity /// 0000902 // cell morphogenesis // inferred from electronic annotation /// 0006954 // inflammatory response // traceable author statement /// 0007569 // cell aging // inferred from sequence or structural similarity /// 0007569 // cell aging // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from sequence or structural similarity /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0035051 // cardiac cell differentiation // inferred from electronic annotation /// 0042554 // superoxide anion generation // inferred from sequence or structural similarity /// 0042554 // superoxide anion generation // inferred from electronic annotation /// 0043406 // positive regulation of MAP kinase activity // inferred from electronic annotation /// 0045453 // bone resorption // inferred from electronic annotation /// 0050667 // homocysteine metabolic process // inferred from direct assay /// 0051897 // positive regulation of protein kinase B signaling cascade // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from electronic annotation /// 0071333 // cellular response to glucose stimulus // inferred from electronic annotation /// 0072593 // reactive oxygen species metabolic process // inferred from direct assay /// 0072593 // reactive oxygen species metabolic process // inferred from electronic annotation /// 2000573 // positive regulation of DNA biosynthetic process // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0071944 // cell periphery // inferred from electronic annotation","0000166 // nucleotide binding // traceable author statement /// 0009055 // electron carrier activity // traceable author statement /// 0016174 // NAD(P)H oxidase activity // traceable author statement /// 0016175 // superoxide-generating NADPH oxidase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0019826 // oxygen sensor activity // traceable author statement /// 0020037 // heme binding // traceable author statement /// 0050660 // flavin adenine dinucleotide binding // traceable author statement /// 0072341 // modified amino acid binding // inferred from direct assay","chr11:89223624-89224733 (-) // 73.87 // q14.3"]
["11739259_a_at",116.12254,135.87407,136.46031,118.66113,145.38354,133.40091,-0.21337223,0.013250351,0.019461632,-0.1821723,0.110844135,-0.013250828,0.93064135,0.79331857,-1.0224477,-0.032027055,1.0224477,"down","USP21",27005.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006464 // cellular protein modification process // non-traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0016578 // histone deubiquitination // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from sequence or structural similarity","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0003713 // transcription coactivator activity // inferred from sequence or structural similarity /// 0004221 // ubiquitin thiolesterase activity // inferred from direct assay /// 0004221 // ubiquitin thiolesterase activity // inferred from sequence or structural similarity /// 0004221 // ubiquitin thiolesterase activity // traceable author statement /// 0004221 // ubiquitin thiolesterase activity // inferred from electronic annotation /// 0004843 // ubiquitin-specific protease activity // inferred from direct assay /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from mutant phenotype /// 0008234 // cysteine-type peptidase activity // inferred from sequence or structural similarity /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0019784 // NEDD8-specific protease activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:161129272-161135515 (+) // 97.26 // q23.3"]
["11731117_s_at",147.85349,153.5646,150.38235,141.45233,135.74318,143.22404,0.022947311,0.0776248,0.047414303,-0.040905,-0.10034132,-0.022947311,0.26339138,0.021092504,1.0747939,0.10406008,1.0747939,"up","PLEKHA8P1",51054.0,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0046836 // glycolipid transport // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0005543 // phospholipid binding // inferred from electronic annotation /// 0017089 // glycolipid transporter activity // inferred from electronic annotation /// 0051861 // glycolipid binding // inferred from electronic annotation","chr12:45566816-45609789 (-) // 87.37 // q12"]
["11750407_a_at",7.6408544,8.701799,8.48754,7.9399323,8.3881235,8.065235,-0.10629845,0.08128142,0.045314074,-0.050905704,0.028315544,-0.028315783,0.9011804,0.7218383,1.0165875,0.02373439,1.0165875,"up","FLT4",2324.0,"0001525 // angiogenesis // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from mutant phenotype /// 0001938 // positive regulation of endothelial cell proliferation // inferred from mutant phenotype /// 0001944 // vasculature development // inferred from sequence or structural similarity /// 0001944 // vasculature development // inferred from electronic annotation /// 0001945 // lymph vessel development // inferred from sequence or structural similarity /// 0001945 // lymph vessel development // inferred from electronic annotation /// 0001946 // lymphangiogenesis // inferred from mutant phenotype /// 0001946 // lymphangiogenesis // inferred from sequence or structural similarity /// 0001946 // lymphangiogenesis // inferred from electronic annotation /// 0002040 // sprouting angiogenesis // inferred from sequence or structural similarity /// 0002040 // sprouting angiogenesis // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // traceable author statement /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from genetic interaction /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0010575 // positive regulation vascular endothelial growth factor production // inferred from mutant phenotype /// 0010595 // positive regulation of endothelial cell migration // inferred from mutant phenotype /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0030307 // positive regulation of cell growth // inferred from electronic annotation /// 0035924 // cellular response to vascular endothelial growth factor stimulus // inferred from direct assay /// 0035924 // cellular response to vascular endothelial growth factor stimulus // inferred from mutant phenotype /// 0038084 // vascular endothelial growth factor signaling pathway // inferred from direct assay /// 0038084 // vascular endothelial growth factor signaling pathway // inferred from mutant phenotype /// 0038084 // vascular endothelial growth factor signaling pathway // traceable author statement /// 0038084 // vascular endothelial growth factor signaling pathway // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043410 // positive regulation of MAPK cascade // inferred from mutant phenotype /// 0046330 // positive regulation of JNK cascade // inferred from mutant phenotype /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0048010 // vascular endothelial growth factor receptor signaling pathway // inferred from direct assay /// 0048010 // vascular endothelial growth factor receptor signaling pathway // inferred from genetic interaction /// 0048010 // vascular endothelial growth factor receptor signaling pathway // inferred from mutant phenotype /// 0048010 // vascular endothelial growth factor receptor signaling pathway // traceable author statement /// 0048010 // vascular endothelial growth factor receptor signaling pathway // inferred from electronic annotation /// 0048514 // blood vessel morphogenesis // inferred from sequence or structural similarity /// 0048514 // blood vessel morphogenesis // inferred from electronic annotation /// 0060312 // regulation of blood vessel remodeling // inferred from sequence or structural similarity /// 0060312 // regulation of blood vessel remodeling // inferred from electronic annotation /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from mutant phenotype /// 0090037 // positive regulation of protein kinase C signaling cascade // inferred from mutant phenotype","0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from mutant phenotype /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0005021 // vascular endothelial growth factor-activated receptor activity // inferred from direct assay /// 0005021 // vascular endothelial growth factor-activated receptor activity // inferred from mutant phenotype /// 0005021 // vascular endothelial growth factor-activated receptor activity // inferred from electronic annotation /// 0005021 // vascular endothelial growth factor-activated receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019838 // growth factor binding // inferred from physical interaction /// 0019838 // growth factor binding // inferred from electronic annotation /// 0019903 // protein phosphatase binding // inferred from physical interaction","chr5:180047974-180076545 (-) // 99.96 // q35.3"]
["11742565_at",17.89441,19.762829,17.019707,16.357094,17.757908,18.143108,0.0055236816,0.14880419,-0.06677914,-0.12406874,-0.0055236816,0.025436401,0.7759466,0.45880786,1.0452888,0.063901596,1.0452888,"up","OR51L1",119682.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr11:5020212-5021160 (+) // 100.0 // p15.4"]
["11719569_a_at",1077.7549,1103.1304,1135.2311,1139.7615,1114.8788,1130.5603,-0.058933258,-0.025359154,0.016023636,0.021769524,-0.010075569,0.010075569,0.64857167,0.27217582,-1.0210211,-0.03001272,1.0210211,"down","QARS",5859.0,"0006412 // translation // inferred from electronic annotation /// 0006418 // tRNA aminoacylation for protein translation // traceable author statement /// 0006418 // tRNA aminoacylation for protein translation // inferred from electronic annotation /// 0006425 // glutaminyl-tRNA aminoacylation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0043039 // tRNA aminoacylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0004812 // aminoacyl-tRNA ligase activity // inferred from electronic annotation /// 0004819 // glutamine-tRNA ligase activity // traceable author statement /// 0004819 // glutamine-tRNA ligase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016876 // ligase activity, forming aminoacyl-tRNA and related compounds // inferred from electronic annotation","chr3:49133364-49142562 (-) // 97.77 // p21.31"]
["11752769_a_at",26.721237,26.56091,27.756239,26.017876,27.756239,23.377884,0.0043411255,-0.0043411255,0.05916643,-0.034142494,0.05916643,-0.18850136,0.72466344,0.37786198,1.0527878,0.07421465,1.0527878,"up","PGBD5",79605.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr1:230458993-230513391 (-) // 96.18 // q42.13"]
["11751630_a_at",25.428888,25.076498,22.258772,27.020704,27.413858,25.97257,-0.01526022,-0.03539276,-0.20735455,0.072336674,0.09317684,0.01526022,0.43891245,0.08847558,-1.1066971,-0.1462604,1.1066971,"down","HDAC11",79885.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0014003 // oligodendrocyte development // inferred from electronic annotation /// 0016568 // chromatin modification // traceable author statement /// 0016568 // chromatin modification // inferred from electronic annotation /// 0016575 // histone deacetylation // inferred from direct assay","0000118 // histone deacetylase complex // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay","0004407 // histone deacetylase activity // inferred from direct assay /// 0008134 // transcription factor binding // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0031078 // histone deacetylase activity (H3-K14 specific) // inferred from electronic annotation /// 0032041 // NAD-dependent histone deacetylase activity (H3-K14 specific) // inferred from electronic annotation /// 0032129 // histone deacetylase activity (H3-K9 specific) // inferred from electronic annotation /// 0034739 // histone deacetylase activity (H4-K16 specific) // inferred from electronic annotation /// 0046969 // NAD-dependent histone deacetylase activity (H3-K9 specific) // inferred from electronic annotation /// 0046970 // NAD-dependent histone deacetylase activity (H4-K16 specific) // inferred from electronic annotation","chr3:13521805-13546456 (+) // 99.61 // p25.1"]
["11752325_a_at",15.548662,16.192282,16.617887,15.890554,18.594015,16.617887,-0.07723093,-0.018715382,0.018715382,-0.045852184,0.18081665,0.018715382,0.7077823,0.35103253,-1.0548006,-0.07697034,1.0548006,"down","NTRK3",4916.0,"0001764 // neuron migration // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0019056 // modulation by virus of host transcription // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0042490 // mechanoreceptor differentiation // inferred from electronic annotation /// 0045471 // response to ethanol // inferred from electronic annotation /// 0046777 // protein autophosphorylation // inferred from electronic annotation /// 0048665 // neuron fate specification // inferred from electronic annotation /// 0048678 // response to axon injury // inferred from electronic annotation /// 0048691 // positive regulation of axon extension involved in regeneration // inferred from electronic annotation /// 0048712 // negative regulation of astrocyte differentiation // inferred from electronic annotation /// 0051412 // response to corticosterone stimulus // inferred from electronic annotation /// 0060548 // negative regulation of cell death // inferred from electronic annotation /// 0071300 // cellular response to retinoic acid // inferred from electronic annotation /// 0090102 // cochlea development // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005030 // neurotrophin receptor activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0043121 // neurotrophin binding // traceable author statement","chr15:88459503-88749164 (-) // 99.91 // q25.3"]
["11740630_a_at",15.709492,12.30394,13.618061,17.086853,14.351405,13.904695,0.15325451,-0.1992619,-0.0528605,0.27450466,0.022809982,-0.022809982,0.75072813,0.4176386,-1.0900978,-0.12445755,1.0900978,"down","ZNF780B",163131.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:40540227-40562082 (-) // 99.93 // q13.2"]
["11739712_a_at",196.86557,194.26825,193.8737,220.48,207.27594,220.76503,-0.037171364,-0.05633211,-0.05926466,0.12626505,0.037170887,0.12812948,0.18465985,0.008595475,-1.1081177,-0.14811112,1.1081177,"down","PHACTR2",9749.0,"","","0003779 // actin binding // inferred from electronic annotation /// 0004864 // protein phosphatase inhibitor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr6:143999101-144152321 (+) // 92.55 // q24.2"]
["11760403_at",51.984077,48.009007,51.72256,51.8869,49.846756,54.999672,0.0049877167,-0.10977697,-0.0022883415,0.0022883415,-0.055582523,0.086340904,0.7680428,0.44697154,-1.0329053,-0.046708044,1.0329053,"down","SPTAN1",6709.0,"0006915 // apoptotic process // traceable author statement /// 0006921 // cellular component disassembly involved in apoptotic process // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0051693 // actin filament capping // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005938 // cell cortex // inferred from electronic annotation /// 0008091 // spectrin // traceable author statement /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0003779 // actin binding // inferred from electronic annotation /// 0003779 // actin binding // traceable author statement /// 0005200 // structural constituent of cytoskeleton // traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from electronic annotation","chr9:131314868-131361964 (+) // 88.58 // q34.11"]
["11739549_s_at",59.46308,54.42108,59.69578,72.3839,68.61515,72.20732,-0.10608387,-0.23391247,-0.100449085,0.17759085,0.100449085,0.17406702,0.1446311,0.004095286,-1.2290277,-0.29751748,1.2290277,"down","LOC100288142 /// NBPF1 /// NBPF10","100132406 /// 100288142 /// 55672","","0005737 // cytoplasm // inferred from electronic annotation","","chr1:146374089-146467746 (+) // 80.04 // q21.1 /// chr1:144593698-145370306 (+) // 80.33 // q21.1 /// chr1:16888813-16940092 (-) // 86.26 // p36.13 /// chr1:147574320-149138067 (-) // 79.93 // q21.2 /// chr1:146032539-147624275 (-) // 80.55 // q21.1"]
["11733880_a_at",60.45527,54.775787,63.57934,69.10758,53.418526,66.159996,-0.036345005,-0.17867517,0.03634453,0.15663052,-0.21487331,0.09374571,0.85430056,0.61477816,-1.0507306,-0.0713928,1.0507306,"down","HMGXB4",10042.0,"0008333 // endosome to lysosome transport // non-traceable author statement /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0030178 // negative regulation of Wnt receptor signaling pathway // inferred from sequence or structural similarity","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0016589 // NURF complex // inferred from direct assay","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation","chr22:35657846-35691800 (+) // 90.12 // q12.3"]
["11731013_a_at",10.05855,9.374209,10.002738,8.892665,9.827926,9.656166,0.04618168,-0.05547166,0.038154364,-0.13155293,0.012717962,-0.012718201,0.730928,0.38715526,1.0377598,0.05347253,1.0377598,"up","SYN2",6854.0,"0007268 // synaptic transmission // traceable author statement /// 0007269 // neurotransmitter secretion // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation","0008021 // synaptic vesicle // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation","chr3:12045861-12227227 (+) // 96.05 // p25.2"]
["11740137_s_at",158.95822,149.17001,159.14137,151.59637,162.2312,158.89256,2.9802322E-4,-0.09139109,0.0019593239,-0.068113804,0.029702187,-2.975464E-4,0.8966756,0.7113273,-1.0117186,-0.016808117,1.0117186,"down","MCTP2",55784.0,"0019722 // calcium-mediated signaling // non-traceable author statement","0005624 // membrane fraction // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation","0005509 // calcium ion binding // inferred from direct assay /// 0005544 // calcium-dependent phospholipid binding // inferred from direct assay","chr15:94774766-95027180 (+) // 79.27 // q26.2"]
["11741705_at",24.577106,26.373652,25.812017,32.441887,26.323195,30.675154,-0.100400925,0.0013813972,-0.0296731,0.3001418,-0.0013813972,0.21935463,0.43546602,0.08580383,-1.1611888,-0.2156026,1.1611888,"down","NR4A3",8013.0,"0001707 // mesoderm formation // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0007411 // axon guidance // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0021766 // hippocampus development // inferred from electronic annotation /// 0030522 // intracellular receptor mediated signaling pathway // inferred from electronic annotation /// 0030534 // adult behavior // inferred from electronic annotation /// 0031100 // organ regeneration // inferred from electronic annotation /// 0033554 // cellular response to stress // inferred from electronic annotation /// 0042472 // inner ear morphogenesis // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043401 // steroid hormone mediated signaling pathway // traceable author statement /// 0043401 // steroid hormone mediated signaling pathway // inferred from electronic annotation /// 0043434 // response to peptide hormone stimulus // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0045787 // positive regulation of cell cycle // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048752 // semicircular canal morphogenesis // inferred from electronic annotation /// 0050885 // neuromuscular process controlling balance // inferred from electronic annotation /// 0060005 // vestibular reflex // inferred from electronic annotation /// 2000108 // positive regulation of leukocyte apoptotic process // inferred from electronic annotation","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation","0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from electronic annotation /// 0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003707 // steroid hormone receptor activity // inferred from electronic annotation /// 0003707 // steroid hormone receptor activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0004879 // ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from electronic annotation /// 0004887 // thyroid hormone receptor activity // traceable author statement /// 0005488 // binding // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:102584136-102599346 (+) // 71.99 // q22.33"]
["11727167_at",76.92697,81.31408,75.20734,91.52922,82.13408,80.47731,-0.07255411,0.007461548,-0.10517025,0.1781888,0.021936893,-0.007461548,0.52327347,0.14357577,-1.08747,-0.12097567,1.08747,"down","FAM40B",57464.0,"0007010 // cytoskeleton organization // inferred from mutant phenotype /// 0008360 // regulation of cell shape // inferred from mutant phenotype /// 0016477 // cell migration // inferred from mutant phenotype","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","","chr7:129074271-129128240 (+) // 88.99 // q32.1"]
["11720072_a_at",70.49871,80.373505,81.86325,81.20731,81.83655,78.628624,-0.19656754,-0.0074448586,0.019051552,0.0074448586,0.01858139,-0.039110184,0.77648914,0.4599467,-1.040511,-0.057292234,1.040511,"down","RING1",6015.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0016568 // chromatin modification // non-traceable author statement /// 0016568 // chromatin modification // inferred from electronic annotation /// 0016574 // histone ubiquitination // inferred from electronic annotation /// 0035518 // histone H2A monoubiquitination // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0048593 // camera-type eye morphogenesis // inferred from electronic annotation","0000151 // ubiquitin ligase complex // inferred from electronic annotation /// 0001739 // sex chromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0016604 // nuclear body // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation /// 0031519 // PcG protein complex // inferred from direct assay /// 0031519 // PcG protein complex // inferred from electronic annotation /// 0035102 // PRC1 complex // inferred from direct assay","0003682 // chromatin binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:33176272-33180493 (+) // 90.34 // p21.32"]
["11753068_a_at",8.725345,9.019435,9.762702,9.500773,9.108208,10.294443,-0.09239411,-0.044569254,0.06967449,0.0304389,-0.030438662,0.14618778,0.720761,0.37096313,-1.0505604,-0.07115905,1.0505604,"down","CFI",3426.0,"0006508 // proteolysis // inferred from electronic annotation /// 0006958 // complement activation, classical pathway // inferred from electronic annotation /// 0030449 // regulation of complement activation // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // traceable author statement /// 0005044 // scavenger receptor activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr4:110661853-110723196 (-) // 96.0 // q25"]
["11742266_a_at",7.21874,7.057763,6.5888753,6.953048,6.719163,6.6254425,0.07878351,0.046247482,-0.05293131,0.024682045,-0.024682045,-0.04494667,0.75978506,0.4318666,1.0274124,0.039015412,1.0274124,"up","C3orf35",339883.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr3:37440652-37476987 (+) // 47.28 // p22.2"]
["11716786_s_at",154.55908,144.16971,160.59784,150.2073,160.52014,164.77202,-0.027297974,-0.12768841,0.027996063,-0.06850147,0.027297497,0.06501484,0.7711319,0.4525004,-1.0354565,-0.050267,1.0354565,"down","TRAK2",66008.0,"0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006493 // protein O-linked glycosylation // inferred from electronic annotation /// 0006605 // protein targeting // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from sequence or structural similarity","0005102 // receptor binding // inferred from sequence or structural similarity /// 0005102 // receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from electronic annotation /// 0050811 // GABA receptor binding // inferred from electronic annotation /// 0050811 // GABA receptor binding // non-traceable author statement","chr2:202241929-202316334 (-) // 97.93 // q33.1"]
["11762377_at",30.974388,31.158453,28.351332,30.815,27.854187,29.110077,0.04850006,0.057047844,-0.07915926,0.04105711,-0.10468149,-0.04105711,0.8052871,0.51336503,1.0307468,0.043690007,1.0307468,"up","KIAA0317",9870.0,"0006464 // cellular protein modification process // inferred from electronic annotation /// 0042787 // protein ubiquitination involved in ubiquitin-dependent protein catabolic process // not recorded","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // not recorded /// 0005737 // cytoplasm // not recorded /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004842 // ubiquitin-protein ligase activity // not recorded /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation","chr14:75119881-75179807 (-) // 88.46 // q24.3"]
["11724623_a_at",19.372087,20.766846,21.268572,19.749063,19.856411,20.470772,-0.057605743,0.042696953,0.07713795,-0.029800892,-0.021980286,0.021980286,0.8083261,0.51967776,1.0214912,0.030676732,1.0214912,"up","CLEC1A",51267.0,"0006952 // defense response // traceable author statement /// 0007166 // cell surface receptor signaling pathway // traceable author statement","0005622 // intracellular // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004888 // transmembrane signaling receptor activity // traceable author statement /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr12:10222153-10251664 (-) // 92.63 // p13.2"]
["11752398_a_at",14.418991,17.592592,16.830618,19.862436,17.592592,17.854496,-0.2869978,0.0,-0.06387997,0.17507458,0.0,0.02131939,0.5329784,0.15125602,-1.1347889,-0.1824239,1.1347889,"down","C1orf228",339541.0,"","","","chr1:45140393-45191261 (+) // 99.02 // p34.1"]
["11724982_s_at",48.826015,48.289528,42.873356,56.476776,45.01244,51.282158,0.007969856,-0.007969856,-0.17959881,0.217978,-0.1093564,0.07877684,0.69801515,0.33705756,-1.0884932,-0.12233243,1.0884932,"down","PCDH7",5099.0,"0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr4:30722029-31148425 (+) // 95.21 // p15.1"]
["11755569_a_at",10.471431,10.889082,12.580455,11.567069,10.81909,11.738595,-0.09999418,-0.04357052,0.16473103,0.04357028,-0.05287361,0.0648067,0.9688065,0.90309083,-1.0079651,-0.01144567,1.0079651,"down","TMEM64",169200.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr8:91637293-91657936 (-) // 88.54 // q21.3"]
["11744644_s_at",35.88024,39.447144,32.978256,33.640015,37.020252,35.60228,0.005609989,0.14234114,-0.11606455,-0.08740139,0.050734997,-0.005609989,0.92762035,0.7849702,1.017283,0.024721028,1.017283,"up","HSFX1 /// HSFX2","100130086 /// 100506164","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chrX:148676926-148858525 (+) // 99.26 // q28 /// chrX:148674174-148855773 (-) // 99.21 // q28"]
["11760732_at",8.553574,8.463538,7.999655,8.604129,8.712325,8.416245,0.0076334476,-0.007633209,-0.08895612,0.016135216,0.034163713,-0.01571703,0.6585134,0.28432652,-1.0289545,-0.041179195,1.0289545,"down","TUBB6",84617.0,"0006184 // GTP catabolic process // inferred from electronic annotation /// 0006457 // protein folding // traceable author statement /// 0007017 // microtubule-based process // inferred from electronic annotation /// 0007018 // microtubule-based movement // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement /// 0051258 // protein polymerization // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0005874 // microtubule // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005198 // structural molecule activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation","chr18:12307667-12326557 (+) // 67.23 // p11.21"]
["11722710_at",331.59985,324.26944,322.46594,284.12463,283.3088,286.19968,0.12635899,0.09410858,0.08606243,-0.09656048,-0.10070896,-0.08606243,0.052216124,1.1346511E-4,1.1460108,0.19662058,1.1460108,"up","CBX2",84733.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007548 // sex differentiation // inferred from electronic annotation /// 0016568 // chromatin modification // non-traceable author statement /// 0016568 // chromatin modification // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045137 // development of primary sexual characteristics // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-dependent // non-traceable author statement","0000792 // heterochromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0031519 // PcG protein complex // inferred from direct assay /// 0031519 // PcG protein complex // inferred from electronic annotation /// 0035102 // PRC1 complex // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0035064 // methylated histone residue binding // inferred from electronic annotation","chr17:77751930-77762305 (+) // 96.17 // q25.3"]
["11739101_a_at",451.5628,429.5406,464.9376,459.59497,478.58514,463.69022,-0.031835556,-0.10396767,0.010274887,-0.0063991547,0.052013397,0.0063991547,0.57811594,0.19225171,-1.0418738,-0.059180554,1.0418738,"down","SYF2",25949.0,"0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay","","chr1:25548766-25559000 (-) // 87.73 // p36.11"]
["11721547_s_at",317.6295,302.6626,328.95486,314.9306,305.33185,314.20737,0.013969421,-0.055665016,0.06451416,0.0016584396,-0.04299736,-0.0016584396,0.8435621,0.5916804,1.0153229,0.02193865,1.0153229,"up","ZEB1",6935.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006955 // immune response // traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0014823 // response to activity // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation /// 0031667 // response to nutrient levels // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from sequence or structural similarity /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0071560 // cellular response to transforming growth factor beta stimulus // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003713 // transcription coactivator activity // traceable author statement /// 0003714 // transcription corepressor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008270 // zinc ion binding // traceable author statement /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070888 // E-box binding // inferred from sequence or structural similarity","chr10:31610063-31818734 (+) // 91.87 // p11.22"]
["11746359_a_at",857.6218,850.8513,938.991,867.86786,907.5626,856.93896,-0.008566856,-0.020001411,0.12220287,0.008566856,0.073088646,-0.009716034,0.96603787,0.8962577,1.0050253,0.007231773,1.0050253,"up","NUCB2",4925.0,"","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005640 // nuclear outer membrane // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005797 // Golgi medial cisterna // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0005164 // tumor necrosis factor receptor binding // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005509 // calcium ion binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr11:17298283-17352927 (+) // 90.54 // p15.1"]
["11762573_at",7.509977,8.21235,7.194421,7.9132123,8.406097,8.21456,-0.10222077,0.026765823,-0.16415095,-0.026765823,0.060406685,0.02715373,0.564951,0.17995545,-1.0718726,-0.10013343,1.0718726,"down","BAGE",574.0,"","0005576 // extracellular region // inferred from electronic annotation","","chr5:180708399-180711301 (+) // 19.46 // q35.3"]
["11751116_a_at",534.53705,537.36566,551.3665,535.096,496.89743,535.3762,-0.0018854141,0.0057287216,0.04283619,-3.7765503E-4,-0.107227325,3.7765503E-4,0.6322997,0.25165957,1.0361998,0.05130222,1.0361998,"up","ACTN1",87.0,"0002576 // platelet degranulation // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0034329 // cell junction assembly // traceable author statement /// 0042981 // regulation of apoptotic process // non-traceable author statement /// 0048041 // focal adhesion assembly // inferred from mutant phenotype /// 0051017 // actin filament bundle assembly // inferred from electronic annotation /// 0051271 // negative regulation of cellular component movement // inferred from mutant phenotype","0001725 // stress fiber // inferred from electronic annotation /// 0001726 // ruffle // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005916 // fascia adherens // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from mutant phenotype /// 0016020 // membrane // inferred from electronic annotation /// 0030018 // Z disc // inferred from electronic annotation /// 0030864 // cortical actin cytoskeleton // inferred from electronic annotation /// 0031093 // platelet alpha granule lumen // traceable author statement /// 0031143 // pseudopodium // traceable author statement /// 0042995 // cell projection // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0005178 // integrin binding // inferred from direct assay /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0017166 // vinculin binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0044325 // ion channel binding // inferred from physical interaction /// 0051015 // actin filament binding // inferred from electronic annotation","chr14:69350891-69444971 (-) // 96.75 // q24.1"]
["11715436_at",376.95825,381.60855,390.35257,404.6704,392.13815,388.1952,-0.046375275,-0.028686523,0.0039978027,0.05596733,0.01058197,-0.0039978027,0.50234604,0.12873442,-1.0313532,-0.044538535,1.0313532,"down","TIMP3",7078.0,"0007417 // central nervous system development // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0007601 // visual perception // inferred from electronic annotation /// 0008624 // induction of apoptosis by extracellular signals // non-traceable author statement /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0009725 // response to hormone stimulus // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0042246 // tissue regeneration // inferred from electronic annotation /// 0043086 // negative regulation of catalytic activity // inferred from electronic annotation /// 0043200 // response to amino acid stimulus // inferred from electronic annotation /// 0043627 // response to estrogen stimulus // inferred from electronic annotation /// 0045861 // negative regulation of proteolysis // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0051045 // negative regulation of membrane protein ectodomain proteolysis // inferred from mutant phenotype /// 0051593 // response to folic acid // inferred from electronic annotation /// 0071310 // cellular response to organic substance // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // non-traceable author statement /// 0005604 // basement membrane // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from direct assay","0004857 // enzyme inhibitor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008191 // metalloendopeptidase inhibitor activity // traceable author statement /// 0008191 // metalloendopeptidase inhibitor activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr22:33193208-33259428 (+) // 89.71 // q12.3"]
["11748774_x_at",104.70735,103.60855,102.70734,95.12317,100.9662,96.00361,0.04015684,0.024937153,0.012333393,-0.09833717,-0.01233387,-0.08504534,0.30271208,0.031028064,1.0651436,0.09104792,1.0651436,"up","CTSL2",1515.0,"0006508 // proteolysis // inferred from electronic annotation /// 0007154 // cell communication // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0008584 // male gonad development // inferred from electronic annotation /// 0009267 // cellular response to starvation // inferred from electronic annotation /// 0009749 // response to glucose stimulus // inferred from electronic annotation /// 0010259 // multicellular organismal aging // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0021675 // nerve development // inferred from electronic annotation /// 0034698 // response to gonadotropin stimulus // inferred from electronic annotation /// 0046697 // decidualization // inferred from electronic annotation /// 0048102 // autophagic cell death // inferred from electronic annotation /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation /// 0060008 // Sertoli cell differentiation // inferred from electronic annotation","0005625 // soluble fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0005773 // vacuole // inferred from electronic annotation /// 0005902 // microvillus // inferred from electronic annotation /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0030141 // secretory granule // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043204 // perikaryon // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from electronic annotation","0004177 // aminopeptidase activity // inferred from electronic annotation /// 0004197 // cysteine-type endopeptidase activity // inferred from electronic annotation /// 0004197 // cysteine-type endopeptidase activity // traceable author statement /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // traceable author statement /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0030984 // kininogen binding // inferred from electronic annotation /// 0042277 // peptide binding // inferred from electronic annotation","chr9:99794398-99801406 (-) // 81.74 // q22.33"]
["11733258_a_at",155.88193,153.4531,157.16014,154.44275,143.46841,155.30641,0.009358883,-0.013297081,0.021140575,-0.0040225983,-0.110361576,0.0040225983,0.6920231,0.32826316,1.0299122,0.0425214,1.0299122,"up","TAOK3",51347.0,"0000165 // MAPK cascade // inferred from mutant phenotype /// 0006281 // DNA repair // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from mutant phenotype /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006469 // negative regulation of protein kinase activity // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from direct assay /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0031572 // G2/M transition DNA damage checkpoint // inferred from mutant phenotype /// 0032874 // positive regulation of stress-activated MAPK cascade // inferred from mutant phenotype /// 0043507 // positive regulation of JUN kinase activity // inferred from mutant phenotype /// 0046329 // negative regulation of JNK cascade // inferred from direct assay /// 0046330 // positive regulation of JNK cascade // inferred from mutant phenotype /// 0046777 // protein autophosphorylation // inferred from direct assay","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004860 // protein kinase inhibitor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr12:118587605-118810750 (-) // 95.99 // q24.23"]
["11716570_a_at",80.95434,81.05051,83.66553,80.07637,84.052734,73.81355,-8.5639954E-4,8.5639954E-4,0.04666853,-0.016588211,0.053329468,-0.13407898,0.7673541,0.44600832,1.0338322,0.04800203,1.0338322,"up","NOTCH3",4854.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0007219 // Notch signaling pathway // traceable author statement /// 0007219 // Notch signaling pathway // inferred from electronic annotation /// 0007220 // Notch receptor processing // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation /// 0042246 // tissue regeneration // inferred from electronic annotation /// 0045596 // negative regulation of cell differentiation // inferred from electronic annotation /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from electronic annotation /// 0048663 // neuron fate commitment // inferred from electronic annotation /// 0050793 // regulation of developmental process // inferred from electronic annotation /// 0072104 // glomerular capillary formation // inferred from electronic annotation","0000139 // Golgi membrane // traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr19:15270443-15311792 (-) // 87.98 // p13.12"]
["11762513_at",18.117725,16.709623,17.274572,14.380279,15.887634,14.282703,0.15311003,0.036387444,0.084358215,-0.1802001,-0.036387444,-0.1900227,0.2555998,0.019544497,1.1702542,0.22682197,1.1702542,"up","PTK7",5754.0,"0001736 // establishment of planar polarity // inferred from electronic annotation /// 0001843 // neural tube closure // inferred from electronic annotation /// 0003401 // axis elongation // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0010976 // positive regulation of neuron projection development // inferred from mutant phenotype /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016477 // cell migration // inferred from mutant phenotype /// 0031532 // actin cytoskeleton reorganization // inferred from mutant phenotype /// 0045198 // establishment of epithelial cell apical/basal polarity // inferred from electronic annotation /// 0060026 // convergent extension // inferred from electronic annotation /// 0060070 // canonical Wnt receptor signaling pathway // inferred from mutant phenotype /// 0060484 // lung-associated mesenchyme development // inferred from electronic annotation /// 0071300 // cellular response to retinoic acid // inferred from mutant phenotype /// 0090103 // cochlea morphogenesis // inferred from electronic annotation","0005624 // membrane fraction // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0005911 // cell-cell junction // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr6:43044102-43101458 (+) // 74.44 // p21.1"]
["11752124_a_at",384.13058,373.55862,394.1577,348.8854,350.1865,356.874,0.07322216,0.032959938,0.11039829,-0.065621376,-0.060251236,-0.032959938,0.17535055,0.006986332,1.0906118,0.12513769,1.0906118,"up","SRRT",51593.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from sequence or structural similarity /// 0008283 // cell proliferation // inferred from electronic annotation /// 0031047 // gene silencing by RNA // inferred from electronic annotation /// 0031053 // primary miRNA processing // inferred from mutant phenotype /// 0031053 // primary miRNA processing // inferred from electronic annotation /// 0046685 // response to arsenic-containing substance // non-traceable author statement /// 0097150 // neuronal stem cell maintenance // inferred from sequence or structural similarity","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from sequence or structural similarity /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction","chr7:100472700-100486284 (+) // 99.86 // q22.1"]
["11725679_at",1150.9966,1178.7227,1136.7007,1145.1393,1175.2123,1123.0292,0.0036802292,0.038021088,-0.014350891,-0.0036802292,0.03371811,-0.0318079,0.8966756,0.7112596,1.006751,0.009706821,1.006751,"up","SMC3",9126.0,"0000087 // M phase of mitotic cell cycle // traceable author statement /// 0000236 // mitotic prometaphase // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006275 // regulation of DNA replication // inferred from mutant phenotype /// 0006281 // DNA repair // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007052 // mitotic spindle organization // inferred from expression pattern /// 0007062 // sister chromatid cohesion // inferred from mutant phenotype /// 0007062 // sister chromatid cohesion // non-traceable author statement /// 0007067 // mitosis // traceable author statement /// 0007067 // mitosis // inferred from electronic annotation /// 0007091 // mitotic metaphase/anaphase transition // traceable author statement /// 0007126 // meiosis // inferred from direct assay /// 0007126 // meiosis // inferred from electronic annotation /// 0007165 // signal transduction // inferred from direct assay /// 0009294 // DNA mediated transformation // traceable author statement /// 0032876 // negative regulation of DNA endoreduplication // inferred from mutant phenotype /// 0051276 // chromosome organization // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000785 // chromatin // inferred from direct assay /// 0000800 // lateral element // inferred from electronic annotation /// 0000922 // spindle pole // inferred from direct assay /// 0005604 // basement membrane // inferred from electronic annotation /// 0005604 // basement membrane // traceable author statement /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0008278 // cohesin complex // non-traceable author statement /// 0016363 // nuclear matrix // inferred from direct assay /// 0030893 // meiotic cohesin complex // inferred from direct assay /// 0030893 // meiotic cohesin complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003777 // microtubule motor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0045502 // dynein binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from physical interaction","chr10:112327435-112364392 (+) // 99.16 // q25.2"]
["11715150_s_at",46.858707,42.507107,49.152897,40.66006,53.212036,47.607132,-0.0114302635,-0.15204334,0.057528973,-0.21613503,0.17200518,0.0114302635,0.9533958,0.8584326,-1.0170672,-0.024414996,1.0170672,"down","PCDHA4",56144.0,"0007155 // cell adhesion // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement","0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr5:140186671-140189169 (+) // 100.0 // q31.3"]
["11738881_a_at",9.409866,8.858268,9.193996,9.801604,9.587957,9.040431,0.016741037,-0.07040858,-0.016741037,0.07558465,0.043790102,-0.041041613,0.68145865,0.313889,-1.034964,-0.049580537,1.034964,"down","SLC26A5",375611.0,"0007605 // sensory perception of sound // inferred from mutant phenotype /// 0007605 // sensory perception of sound // inferred from electronic annotation /// 0008272 // sulfate transport // inferred from electronic annotation /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0042391 // regulation of membrane potential // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0016328 // lateral plasma membrane // inferred from electronic annotation","0008271 // secondary active sulfate transmembrane transporter activity // inferred from electronic annotation /// 0015116 // sulfate transmembrane transporter activity // inferred from electronic annotation /// 0030507 // spectrin binding // inferred from electronic annotation","chr7:102993176-103086598 (-) // 86.71 // q22.1"]
["11733188_at",228.56287,210.9637,215.49928,224.36322,209.38777,229.13719,0.055831432,-0.059764862,-0.029076576,0.029076576,-0.07058287,0.059452057,0.91845655,0.7617313,-1.0118428,-0.016985238,1.0118428,"down","INCENP",3619.0,"0000087 // M phase of mitotic cell cycle // traceable author statement /// 0000236 // mitotic prometaphase // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0000910 // cytokinesis // inferred from mutant phenotype /// 0007049 // cell cycle // inferred from electronic annotation /// 0007059 // chromosome segregation // inferred from mutant phenotype /// 0007059 // chromosome segregation // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0000775 // chromosome, centromeric region // inferred from direct assay /// 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from direct assay /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0000795 // synaptonemal complex // inferred from electronic annotation /// 0000801 // central element // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005721 // centromeric heterochromatin // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005819 // spindle // inferred from direct assay /// 0005819 // spindle // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0030496 // midbody // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr11:61891427-61920635 (+) // 87.91 // q12.3"]
["11745217_a_at",16.57732,16.538437,15.548084,14.73077,15.391941,14.533944,0.09975481,0.09636688,0.0072808266,-0.07062316,-0.0072808266,-0.09002972,0.31412783,0.03440493,1.089585,0.12377868,1.089585,"up","MKL2",57496.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007517 // muscle organ development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045844 // positive regulation of striated muscle tissue development // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay","0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction","chr16:14173144-14360633 (+) // 97.56 // p13.12"]
["11723361_a_at",97.03885,93.04397,101.98247,95.84556,89.2113,95.08306,0.023612976,-0.037036896,0.095299244,0.0057616234,-0.09772301,-0.0057611465,0.67139125,0.3001862,1.0423689,0.05986593,1.0423689,"up","MED12",9968.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // inferred from direct assay /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0030178 // negative regulation of Wnt receptor signaling pathway // inferred from mutant phenotype /// 0030518 // intracellular steroid hormone receptor signaling pathway // inferred from direct assay /// 0030521 // androgen receptor signaling pathway // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0016592 // mediator complex // inferred from direct assay /// 0016592 // mediator complex // inferred from electronic annotation","0001104 // RNA polymerase II transcription cofactor activity // inferred from direct assay /// 0001104 // RNA polymerase II transcription cofactor activity // inferred from electronic annotation /// 0003712 // transcription cofactor activity // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0003713 // transcription coactivator activity // traceable author statement /// 0004872 // receptor activity // inferred from direct assay /// 0008013 // beta-catenin binding // inferred from electronic annotation /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0030374 // ligand-dependent nuclear receptor transcription coactivator activity // non-traceable author statement /// 0042809 // vitamin D receptor binding // non-traceable author statement /// 0046966 // thyroid hormone receptor binding // inferred from direct assay","chrX:70338262-70362304 (+) // 94.83 // q13.1"]
["11743787_a_at",72.08773,68.75417,74.54905,79.24451,72.04072,80.23294,-0.024218082,-0.09252453,0.024218082,0.11233902,-0.025158882,0.13022232,0.5422913,0.15823478,-1.0742345,-0.10330894,1.0742345,"down","GORAB",92344.0,"","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr1:170501262-170522974 (+) // 97.66 // q24.2"]
["11753755_x_at",5493.528,5391.4824,5450.4727,5507.858,5427.563,5448.2466,0.011646271,-0.015403748,2.9468536E-4,0.015403748,-0.005783081,-2.9468536E-4,0.8888967,0.69438136,-1.0029593,-0.0042629926,1.0029593,"down","ATP5J2",9551.0,"0006200 // ATP catabolic process // inferred from direct assay /// 0006754 // ATP biosynthetic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0015992 // proton transport // non-traceable author statement /// 0015992 // proton transport // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0042776 // mitochondrial ATP synthesis coupled proton transport // inferred by curator /// 0042776 // mitochondrial ATP synthesis coupled proton transport // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005739 // mitochondrion // inferred by curator /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005753 // mitochondrial proton-transporting ATP synthase complex // inferred from direct assay /// 0005753 // mitochondrial proton-transporting ATP synthase complex // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0045263 // proton-transporting ATP synthase complex, coupling factor F(o) // inferred from electronic annotation","0016887 // ATPase activity // inferred from direct assay /// 0022857 // transmembrane transporter activity // inferred by curator","chr7:99055816-99063784 (-) // 93.49 // q22.1"]
["11760114_s_at",168.70728,168.7061,152.81253,153.80528,153.37602,162.06839,0.095668316,0.0956583,-0.047091007,-0.037748814,-0.04178095,0.037748814,0.6832415,0.31611204,1.0439159,0.062005445,1.0439159,"up","HERC2P2 /// HERC2P3","283755 /// 400322","0007283 // spermatogenesis // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation","0005743 // mitochondrial inner membrane // inferred from electronic annotation","0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr15:20643302-20667803 (-) // 97.81 // q11.1"]
["11718453_a_at",10.535709,11.392653,10.39755,10.282737,10.609473,12.366804,-0.005032778,0.10778332,-0.0240767,-0.040095806,0.005032778,0.22615242,0.8937768,0.7045896,-1.0263138,-0.037471883,1.0263138,"down","AXIN2",8313.0,"0001756 // somitogenesis // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from mutant phenotype /// 0001957 // intramembranous ossification // not recorded /// 0001957 // intramembranous ossification // inferred from electronic annotation /// 0003413 // chondrocyte differentiation involved in endochondral bone morphogenesis // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0009950 // dorsal/ventral axis specification // not recorded /// 0010718 // positive regulation of epithelial to mesenchymal transition // inferred from mutant phenotype /// 0010942 // positive regulation of cell death // inferred from mutant phenotype /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0030111 // regulation of Wnt receptor signaling pathway // inferred from electronic annotation /// 0030282 // bone mineralization // inferred from electronic annotation /// 0032423 // regulation of mismatch repair // inferred from mutant phenotype /// 0034613 // cellular protein localization // inferred from direct assay /// 0035414 // negative regulation of catenin import into nucleus // inferred from mutant phenotype /// 0038032 // termination of G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0042476 // odontogenesis // inferred from mutant phenotype /// 0043547 // positive regulation of GTPase activity // not recorded /// 0043570 // maintenance of DNA repeat elements // inferred from mutant phenotype /// 0045668 // negative regulation of osteoblast differentiation // not recorded /// 0045668 // negative regulation of osteoblast differentiation // inferred from electronic annotation /// 0045860 // positive regulation of protein kinase activity // inferred from electronic annotation /// 0048255 // mRNA stabilization // inferred from mutant phenotype /// 0061181 // regulation of chondrocyte development // inferred from electronic annotation /// 0070602 // regulation of centromeric sister chromatid cohesion // inferred from mutant phenotype /// 0070602 // regulation of centromeric sister chromatid cohesion // inferred from electronic annotation /// 0071407 // cellular response to organic cyclic compound // not recorded /// 0071407 // cellular response to organic cyclic compound // inferred from electronic annotation /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from direct assay /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from mutant phenotype /// 0090244 // Wnt receptor signaling pathway involved in somitogenesis // not recorded /// 2000054 // negative regulation of Wnt receptor signaling pathway involved in dorsal/ventral axis specification // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005813 // centrosome // inferred from electronic annotation /// 0005881 // cytoplasmic microtubule // not recorded /// 0005886 // plasma membrane // not recorded /// 0005938 // cell cortex // not recorded /// 0014069 // postsynaptic density // not recorded /// 0016023 // cytoplasmic membrane-bounded vesicle // not recorded /// 0034747 // Axin-APC-beta-catenin-GSK3B complex // not recorded /// 0034747 // Axin-APC-beta-catenin-GSK3B complex // non-traceable author statement /// 0043234 // protein complex // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0005096 // GTPase activator activity // not recorded /// 0008013 // beta-catenin binding // not recorded /// 0008013 // beta-catenin binding // non-traceable author statement /// 0008013 // beta-catenin binding // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0019901 // protein kinase binding // not recorded /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from electronic annotation /// 0070016 // armadillo repeat domain binding // not recorded /// 0070411 // I-SMAD binding // inferred from electronic annotation","chr17:63524680-63557766 (-) // 97.67 // q24.1"]
["11745726_x_at",371.75516,378.20746,399.9907,445.66006,456.46582,458.72052,-0.18360233,-0.15877724,-0.077988625,0.077988625,0.11255169,0.11966038,0.11455932,0.0020976386,-1.1838801,-0.24352296,1.1838801,"down","GRN",2896.0,"0001835 // blastocyst hatching // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0007566 // embryo implantation // inferred from electronic annotation /// 0050679 // positive regulation of epithelial cell proliferation // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0005125 // cytokine activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // traceable author statement","chr17:42422490-42430470 (+) // 97.27 // q21.31"]
["11756056_a_at",622.3309,650.36,618.0259,604.1739,584.5977,591.41144,0.026366234,0.089922905,0.0163517,-0.0163517,-0.06387138,-0.047153473,0.30740505,0.032270882,1.061918,0.086672395,1.061918,"up","SLC2A1",6513.0,"0005975 // carbohydrate metabolic process // traceable author statement /// 0006112 // energy reserve metabolic process // traceable author statement /// 0006766 // vitamin metabolic process // traceable author statement /// 0006767 // water-soluble vitamin metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006970 // response to osmotic stress // inferred from electronic annotation /// 0008643 // carbohydrate transport // inferred from electronic annotation /// 0008645 // hexose transport // traceable author statement /// 0015758 // glucose transport // traceable author statement /// 0015758 // glucose transport // inferred from electronic annotation /// 0019852 // L-ascorbic acid metabolic process // traceable author statement /// 0042149 // cellular response to glucose starvation // inferred from electronic annotation /// 0042908 // xenobiotic transport // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0050796 // regulation of insulin secretion // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0070837 // dehydroascorbic acid transport // inferred from electronic annotation","0001939 // female pronucleus // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005624 // membrane fraction // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005901 // caveola // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from electronic annotation /// 0016020 // membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0030496 // midbody // inferred from direct assay /// 0031982 // vesicle // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation /// 0005355 // glucose transmembrane transporter activity // traceable author statement /// 0005355 // glucose transmembrane transporter activity // inferred from electronic annotation /// 0019900 // kinase binding // inferred from electronic annotation /// 0022857 // transmembrane transporter activity // inferred from electronic annotation /// 0022891 // substrate-specific transmembrane transporter activity // inferred from electronic annotation /// 0033300 // dehydroascorbic acid transporter activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0042910 // xenobiotic transporter activity // inferred from electronic annotation /// 0055056 // D-glucose transmembrane transporter activity // inferred from electronic annotation","chr1:43393282-43394973 (-) // 100.0 // p34.2"]
["11732501_a_at",23.518345,24.910769,22.582409,24.657372,22.187305,24.820595,-0.03411627,0.04886675,-0.09270334,0.03411627,-0.118168354,0.04363489,0.9542702,0.8601114,-1.0087103,-0.012511844,1.0087103,"down","TMOD1",7111.0,"0030049 // muscle filament sliding // traceable author statement /// 0030239 // myofibril assembly // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0008180 // signalosome // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030016 // myofibril // inferred from electronic annotation /// 0030863 // cortical cytoskeleton // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0005523 // tropomyosin binding // inferred from electronic annotation","chr9:100286421-100363530 (+) // 94.07 // q22.33"]
["11756345_x_at",33.100353,35.274086,33.377033,37.42492,35.87231,33.948437,-0.064130306,0.02763176,-0.052121162,0.11302233,0.05189371,-0.02763176,0.5918202,0.20558217,-1.0535811,-0.075301394,1.0535811,"down","TMEM91",641649.0,"0009607 // response to biotic stimulus // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr19:41882677-41889947 (+) // 63.29 // q13.2"]
["11754216_x_at",628.0165,634.2084,629.3551,663.3045,685.5589,665.2076,-0.04651165,-0.032357216,-0.043439865,0.032357216,0.079966545,0.03649044,0.15091813,0.00464716,-1.0646464,-0.0903743,1.0646464,"down","ZBTB8OS",339487.0,"","","","chr1:33086224-33116614 (-) // 79.77 // p35.1"]
["11730371_a_at",6.5602374,5.703287,5.347527,7.061535,5.425903,7.040783,0.10097718,-0.10097718,-0.19389892,0.20721102,-0.17290759,0.20296502,0.7403641,0.40113452,-1.104752,-0.14372247,1.104752,"down","EIF4E3",317649.0,"0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005845 // mRNA cap binding complex // inferred from sequence or structural similarity","0003723 // RNA binding // inferred from electronic annotation /// 0003743 // translation initiation factor activity // inferred from electronic annotation","chr3:71728271-71803924 (-) // 86.94 // p13"]
["11755290_s_at",290.9729,275.40912,285.2602,311.0404,284.30838,319.82678,0.014303207,-0.0650053,-0.014303207,0.11052036,-0.019124985,0.15070915,0.522257,0.14287195,-1.0735356,-0.10236998,1.0735356,"down","FBXL18",80028.0,"","","","chr7:5515427-5520173 (-) // 72.97 // p22.1"]
["11750967_a_at",96.15308,101.54233,91.4818,105.80109,94.74485,96.36281,-0.0015721321,0.07710457,-0.07342005,0.13637829,-0.02285719,0.0015716553,0.8466804,0.59817785,-1.0264477,-0.037660055,1.0264477,"down","ZNF586",54807.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:58280996-58291611 (+) // 99.89 // q13.43"]
["11758970_a_at",143.64374,141.24826,146.00536,149.41022,156.29393,152.7685,-0.04015541,-0.06441736,-0.016628742,0.016628265,0.08161116,0.04869604,0.25015143,0.018486593,-1.0639122,-0.089379035,1.0639122,"down","PVRL3",25945.0,"0002089 // lens morphogenesis in camera-type eye // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from sequence or structural similarity /// 0007156 // homophilic cell adhesion // inferred from electronic annotation /// 0009566 // fertilization // inferred from electronic annotation /// 0016337 // cell-cell adhesion // inferred from electronic annotation /// 0034329 // cell junction assembly // traceable author statement /// 0034332 // adherens junction organization // traceable author statement /// 0045216 // cell-cell junction organization // traceable author statement /// 0060042 // retina morphogenesis in camera-type eye // inferred from electronic annotation","0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from electronic annotation /// 0005913 // cell-cell adherens junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0043296 // apical junction complex // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from sequence or structural similarity /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0050839 // cell adhesion molecule binding // inferred from physical interaction","chr3:110790600-110854801 (+) // 91.74 // q13.13"]
["11730993_a_at",6.1083455,6.1066175,5.9078584,5.9095836,6.6347866,6.425928,2.040863E-4,-2.040863E-4,-0.0479424,-0.047521114,0.1194725,0.0733273,0.6593463,0.28551692,-1.045655,-0.06440695,1.045655,"down","NLGN4X",57502.0,"0003360 // brainstem development // inferred from sequence or structural similarity /// 0007155 // cell adhesion // inferred from electronic annotation /// 0021549 // cerebellum development // inferred from sequence or structural similarity /// 0035176 // social behavior // inferred from mutant phenotype /// 0045216 // cell-cell junction organization // non-traceable author statement /// 0046622 // positive regulation of organ growth // inferred from sequence or structural similarity /// 0050808 // synapse organization // inferred from mutant phenotype /// 0050808 // synapse organization // non-traceable author statement /// 0071625 // vocalization behavior // inferred from mutant phenotype /// 0071625 // vocalization behavior // inferred from sequence or structural similarity /// 0090394 // negative regulation of excitatory postsynaptic membrane potential // inferred from direct assay /// 0097105 // presynaptic membrane assembly // inferred from direct assay","0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0009986 // cell surface // inferred from direct assay /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030425 // dendrite // inferred from direct assay /// 0045202 // synapse // not recorded /// 0045202 // synapse // inferred from sequence or structural similarity /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation /// 0060076 // excitatory synapse // inferred from direct assay","0004091 // carboxylesterase activity // not recorded /// 0004872 // receptor activity // not recorded /// 0005515 // protein binding // inferred from physical interaction /// 0031404 // chloride ion binding // inferred from direct assay /// 0042043 // neurexin family protein binding // inferred from direct assay /// 0042043 // neurexin family protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay","chrX:5808084-6145888 (-) // 97.04 // p22.32"]
["11728698_at",402.77957,401.37436,423.68622,353.68307,366.55652,354.57404,0.07049847,0.06545639,0.14350414,-0.11703491,-0.06545639,-0.11340523,0.13157018,0.0031510785,1.1421762,0.19178516,1.1421762,"up","HSPA4L",22824.0,"0006457 // protein folding // inferred from sequence or structural similarity /// 0006950 // response to stress // inferred from electronic annotation /// 0006986 // response to unfolded protein // inferred from sequence or structural similarity /// 0006986 // response to unfolded protein // traceable author statement","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from sequence or structural similarity /// 0005524 // ATP binding // inferred from electronic annotation","chr4:128702950-128755468 (+) // 99.85 // q28.1"]
["11731213_at",17.91536,21.91191,20.619408,18.384876,19.76618,19.373676,-0.12736893,0.16314936,0.07543707,-0.090046406,0.014468193,-0.014468193,0.8002829,0.5040847,1.0476,0.06708801,1.0476,"up","CCL25",6370.0,"0006935 // chemotaxis // inferred from electronic annotation /// 0006935 // chemotaxis // traceable author statement /// 0006954 // inflammatory response // inferred from electronic annotation /// 0006955 // immune response // inferred from electronic annotation /// 0006955 // immune response // traceable author statement /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0050900 // leukocyte migration // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005625 // soluble fraction // traceable author statement","0005125 // cytokine activity // inferred from electronic annotation /// 0005179 // hormone activity // traceable author statement /// 0008009 // chemokine activity // inferred from electronic annotation /// 0008009 // chemokine activity // traceable author statement /// 0031735 // CCR10 chemokine receptor binding // inferred from direct assay","chr19:8117645-8127534 (+) // 85.8 // p13.2"]
["11762518_s_at",20.697474,15.90174,23.774387,18.57746,22.698742,22.057505,-0.045907497,-0.4261775,0.15404606,-0.20180893,0.08725023,0.045907497,0.8870927,0.68830276,-1.0593132,-0.083129175,1.0593132,"down","FLJ39061 /// LOC100652824","100652824 /// 165057","","","","chr2:202938011-203019479 (+) // 96.63 // q33.1"]
["11740334_at",11.05272,11.893513,12.807248,13.271935,13.78484,13.847821,-0.23826814,-0.13249469,-0.025709152,0.025709152,0.080412865,0.086989164,0.32652095,0.037898585,-1.145937,-0.19652769,1.145937,"down","TUBAL3",79861.0,"0006184 // GTP catabolic process // inferred from electronic annotation /// 0007017 // microtubule-based process // inferred from electronic annotation /// 0007018 // microtubule-based movement // inferred from electronic annotation /// 0051258 // protein polymerization // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005198 // structural molecule activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation","chr10:5435061-5446795 (-) // 98.57 // p15.1"]
["11724676_a_at",113.72986,112.60052,118.77932,117.88478,120.05366,122.75648,-0.057219505,-0.07161713,0.0054531097,-0.0054531097,0.020848274,0.052968502,0.44620645,0.09279143,-1.045299,-0.063915744,1.045299,"down","KLHL2",11275.0,"0006886 // intracellular protein transport // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement","0003779 // actin binding // inferred from electronic annotation /// 0005215 // transporter activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr4:166128769-166244299 (+) // 95.53 // q32.3"]
["11746786_a_at",245.7172,261.25778,221.46048,259.88293,283.14743,266.08902,-0.08466911,0.0038061142,-0.23461866,-0.0038061142,0.119885445,0.030241013,0.49513084,0.12232518,-1.1125993,-0.15393405,1.1125993,"down","STXBP1",6812.0,"0002576 // platelet degranulation // inferred from mutant phenotype /// 0006112 // energy reserve metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006887 // exocytosis // inferred from electronic annotation /// 0006904 // vesicle docking involved in exocytosis // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007269 // neurotransmitter secretion // traceable author statement /// 0007269 // neurotransmitter secretion // inferred from electronic annotation /// 0007274 // neuromuscular synaptic transmission // inferred from electronic annotation /// 0007412 // axon target recognition // inferred from sequence or structural similarity /// 0007412 // axon target recognition // inferred from electronic annotation /// 0010807 // regulation of synaptic vesicle priming // inferred from sequence or structural similarity /// 0014047 // glutamate secretion // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016188 // synaptic vesicle maturation // inferred from sequence or structural similarity /// 0016188 // synaptic vesicle maturation // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0032229 // negative regulation of synaptic transmission, GABAergic // inferred from sequence or structural similarity /// 0032229 // negative regulation of synaptic transmission, GABAergic // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0050796 // regulation of insulin secretion // traceable author statement /// 0060292 // long term synaptic depression // inferred from electronic annotation /// 0070527 // platelet aggregation // inferred from mutant phenotype","0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0031091 // platelet alpha granule // inferred from direct assay /// 0043234 // protein complex // inferred from sequence or structural similarity","0000149 // SNARE binding // inferred from sequence or structural similarity /// 0017075 // syntaxin-1 binding // inferred from sequence or structural similarity /// 0017075 // syntaxin-1 binding // inferred from electronic annotation /// 0019905 // syntaxin binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from sequence or structural similarity","chr9:130374555-130453470 (+) // 98.72 // q34.11"]
["11738048_a_at",15.947481,15.702887,18.245687,19.832556,17.339985,14.669163,-0.060386896,-0.08268571,0.13384008,0.25415516,0.060387135,-0.1809287,0.9160225,0.756537,-1.0335552,-0.04761537,1.0335552,"down","ELOVL7",79993.0,"0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0019367 // fatty acid elongation, saturated fatty acid // inferred from direct assay /// 0019432 // triglyceride biosynthetic process // traceable author statement /// 0034626 // fatty acid elongation, polyunsaturated fatty acid // inferred from direct assay /// 0035338 // long-chain fatty-acyl-CoA biosynthetic process // traceable author statement /// 0042761 // very long-chain fatty acid biosynthetic process // inferred from direct assay /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0016740 // transferase activity // inferred from electronic annotation /// 0016747 // transferase activity, transferring acyl groups other than amino-acyl groups // inferred from electronic annotation","chr5:60047616-60140216 (-) // 86.79 // q12.1"]
["11718655_s_at",2167.932,2221.689,2154.1738,2371.2883,2483.7761,2329.004,-0.0693655,-0.034028053,-0.07855034,0.059986115,0.12685013,0.034028053,0.21282148,0.012068286,-1.0975368,-0.13426931,1.0975368,"down","CHMP5",51510.0,"0001919 // regulation of receptor recycling // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0007040 // lysosome organization // inferred from electronic annotation /// 0008333 // endosome to lysosome transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016044 // cellular membrane organization // traceable author statement /// 0016197 // endosomal transport // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr9:33264876-33281511 (+) // 97.99 // p13.3"]
["11731645_a_at",424.15366,449.80447,401.90244,455.12292,445.33115,448.9454,-0.076122284,0.008588791,-0.1538639,0.025547028,-0.005830765,0.005830765,0.5437703,0.16013375,-1.0587153,-0.082314745,1.0587153,"down","CAMKK2",10645.0,"0000165 // MAPK cascade // traceable author statement /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0019722 // calcium-mediated signaling // traceable author statement /// 0045859 // regulation of protein kinase activity // traceable author statement /// 0045893 // positive regulation of transcription, DNA-dependent // traceable author statement /// 0046777 // protein autophosphorylation // inferred from direct assay","0005622 // intracellular // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004683 // calmodulin-dependent protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // traceable author statement /// 0005509 // calcium ion binding // inferred from direct assay /// 0005516 // calmodulin binding // traceable author statement /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr12:121675499-121736111 (-) // 90.72 // q24.31"]
["11730393_at",8.161718,10.040723,9.405821,9.553997,8.605979,8.933001,-0.16747665,0.13144207,0.037204504,0.059755087,-0.09101009,-0.037204504,0.9423768,0.8255408,1.016218,0.023209848,1.016218,"up","GPR4",2828.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement","chr19:46093021-46105466 (-) // 84.3 // q13.32"]
["11720844_at",348.59772,380.08267,343.37454,399.87042,392.38214,384.17578,-0.1324768,-0.0077266693,-0.15425682,0.06549263,0.038219452,0.0077266693,0.35933247,0.049623538,-1.098321,-0.13529971,1.098321,"down","N4BP1",9683.0,"0031397 // negative regulation of protein ubiquitination // inferred from sequence or structural similarity /// 0031397 // negative regulation of protein ubiquitination // inferred from electronic annotation /// 0032435 // negative regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from sequence or structural similarity /// 0032435 // negative regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from sequence or structural similarity /// 0005730 // nucleolus // inferred from electronic annotation /// 0016605 // PML body // inferred from sequence or structural similarity /// 0016605 // PML body // inferred from electronic annotation","","chr16:48572636-48644125 (-) // 87.76 // q12.1"]
["11760764_at",40.23819,44.546837,43.033268,38.627373,41.532196,39.300842,-0.022832394,0.12392521,0.07405472,-0.081774235,0.022832394,-0.05683756,0.5232069,0.14352573,1.069529,0.09697568,1.069529,"up","ADAMTS16",170690.0,"0006508 // proteolysis // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from electronic annotation","0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr5:5140442-5223840 (+) // 86.89 // p15.32"]
["11727057_a_at",89.76446,89.25702,93.44233,75.12833,85.197136,92.874,0.0040893555,-0.0040893555,0.062021255,-0.25269794,-0.07124996,0.053219795,0.6640677,0.2908853,1.079914,0.11091639,1.079914,"up","RRP8",23378.0,"0000183 // chromatin silencing at rDNA // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006364 // rRNA processing // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation /// 0042149 // cellular response to glucose starvation // inferred from mutant phenotype /// 0046015 // regulation of transcription by glucose // inferred from mutant phenotype /// 0071158 // positive regulation of cell cycle arrest // inferred from mutant phenotype /// 0072332 // signal transduction by p53 class mediator resulting in induction of apoptosis // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005677 // chromatin silencing complex // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0033553 // rDNA heterochromatin // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008757 // S-adenosylmethionine-dependent methyltransferase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0035064 // methylated histone residue binding // inferred from direct assay","chr11:6616304-6624880 (-) // 65.43 // p15.4"]
["11752473_x_at",72.831566,66.315704,67.540665,93.22303,76.040665,84.20425,-0.031103611,-0.16631746,-0.13991117,0.3250184,0.031103611,0.17822504,0.32389602,0.037002638,-1.2231147,-0.29055974,1.2231147,"down","MED24",9862.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // inferred from direct assay /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016573 // histone acetylation // inferred from electronic annotation /// 0030518 // intracellular steroid hormone receptor signaling pathway // inferred from direct assay /// 0030521 // androgen receptor signaling pathway // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0051291 // protein heterooligomerization // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0016592 // mediator complex // non-traceable author statement /// 0016592 // mediator complex // inferred from electronic annotation","0001104 // RNA polymerase II transcription cofactor activity // inferred from direct assay /// 0003712 // transcription cofactor activity // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from electronic annotation /// 0004402 // histone acetyltransferase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from direct assay /// 0004872 // receptor activity // inferred from electronic annotation /// 0030374 // ligand-dependent nuclear receptor transcription coactivator activity // non-traceable author statement /// 0042809 // vitamin D receptor binding // non-traceable author statement /// 0046966 // thyroid hormone receptor binding // inferred from direct assay","chr17:38179384-38210661 (-) // 99.95 // q21.1"]
["11742515_at",13.26798,12.8412075,11.557456,13.557493,15.1974125,11.197443,0.023583889,-0.023583889,-0.17554092,0.054725647,0.21946096,-0.22119546,0.8561257,0.6198354,-1.054221,-0.07617738,1.054221,"down","OR51T1",401665.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr11:4903048-4904113 (+) // 100.0 // p15.4"]
["11741192_a_at",233.37668,228.0162,215.98695,267.06104,250.37315,243.42497,-0.030408382,-0.06393242,-0.14212465,0.16410065,0.07101107,0.030408382,0.3046427,0.03157008,-1.1229771,-0.16732855,1.1229771,"down","RBKS",64080.0,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006014 // D-ribose metabolic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0019303 // D-ribose catabolic process // inferred from electronic annotation","","0000166 // nucleotide binding // inferred from electronic annotation /// 0004747 // ribokinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016773 // phosphotransferase activity, alcohol group as acceptor // inferred from electronic annotation","chr2:28004265-28113284 (-) // 99.84 // p23.2"]
["11759281_at",150.32288,154.64125,153.37273,144.67975,152.2858,152.64812,-0.020431042,0.020430088,0.008546829,-0.07563257,-0.0017137527,0.0017142296,0.72199,0.37294412,1.0196396,0.028059326,1.0196396,"up","SERINC5",256987.0,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0006658 // phosphatidylserine metabolic process // inferred from sequence or structural similarity /// 0008654 // phospholipid biosynthetic process // inferred from electronic annotation /// 0051347 // positive regulation of transferase activity // inferred from sequence or structural similarity","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr5:79441912-79551870 (-) // 71.53 // q14.1"]
["11755786_a_at",493.4582,475.50424,519.7799,505.07382,489.75937,463.36053,0.0054273605,-0.048042297,0.08040047,0.038993835,-0.0054273605,-0.085365295,0.8462764,0.5970279,1.0209141,0.02986145,1.0209141,"up","FGFR3",2261.0,"0000165 // MAPK cascade // traceable author statement /// 0001501 // skeletal system development // traceable author statement /// 0001958 // endochondral ossification // traceable author statement /// 0002062 // chondrocyte differentiation // traceable author statement /// 0003416 // endochondral bone growth // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007259 // JAK-STAT cascade // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from genetic interaction /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from direct assay /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from genetic interaction /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from mutant phenotype /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from electronic annotation /// 0010518 // positive regulation of phospholipase activity // inferred from mutant phenotype /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0035988 // chondrocyte proliferation // traceable author statement /// 0042511 // positive regulation of tyrosine phosphorylation of Stat1 protein // inferred from mutant phenotype /// 0042517 // positive regulation of tyrosine phosphorylation of Stat3 protein // inferred from mutant phenotype /// 0042981 // regulation of apoptotic process // inferred from mutant phenotype /// 0043410 // positive regulation of MAPK cascade // inferred from mutant phenotype /// 0043552 // positive regulation of phosphatidylinositol 3-kinase activity // inferred from mutant phenotype /// 0043552 // positive regulation of phosphatidylinositol 3-kinase activity // traceable author statement /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0048640 // negative regulation of developmental growth // inferred from sequence or structural similarity /// 0060349 // bone morphogenesis // traceable author statement /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from mutant phenotype /// 0070977 // bone maturation // inferred from sequence or structural similarity","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0005887 // integral to plasma membrane // traceable author statement /// 0005925 // focal adhesion // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005007 // fibroblast growth factor-activated receptor activity // inferred from mutant phenotype /// 0005007 // fibroblast growth factor-activated receptor activity // inferred from electronic annotation /// 0005007 // fibroblast growth factor-activated receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0017134 // fibroblast growth factor binding // inferred from direct assay /// 0017134 // fibroblast growth factor binding // inferred from physical interaction","chr4:1795033-1810592 (+) // 95.61 // p16.3"]
["11722500_a_at",21.00921,22.563519,24.162838,23.372614,25.412127,25.899782,-0.17778254,-0.07481241,0.023985386,-0.023985386,0.09671259,0.124135494,0.5009242,0.12744437,-1.1032993,-0.14182416,1.1032993,"down","LYSMD3",116068.0,"0016998 // cell wall macromolecule catabolic process // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr5:89811442-89825405 (-) // 94.76 // q14.3"]
["11758932_at",10.835561,11.348562,9.729112,13.196379,11.39628,11.390305,-0.0693841,-0.002648592,-0.22477794,0.21498418,0.0034048557,0.002648592,0.52978927,0.14832383,-1.1271005,-0.17261612,1.1271005,"down","CHAF1B /// MORC3","23515 /// 8208","0006260 // DNA replication // inferred from electronic annotation /// 0006281 // DNA repair // inferred from electronic annotation /// 0006335 // DNA replication-dependent nucleosome assembly // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006461 // protein complex assembly // traceable author statement /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007569 // cell aging // inferred from direct assay /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from direct assay /// 0031497 // chromatin assembly // inferred from direct assay /// 0048147 // negative regulation of fibroblast proliferation // inferred from direct assay /// 0050821 // protein stabilization // inferred from direct assay /// 0051457 // maintenance of protein location in nucleus // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005678 // chromatin assembly complex // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0016235 // aggresome // inferred from direct assay /// 0016605 // PML body // inferred from direct assay /// 0016605 // PML body // inferred from electronic annotation /// 0033186 // CAF-1 complex // inferred from direct assay /// 0045111 // intermediate filament cytoskeleton // inferred from direct assay","0003682 // chromatin binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0042393 // histone binding // non-traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // traceable author statement","chr21:37756487-37789124 (+) // 95.78 // q22.12"]
["11748208_a_at",88.60709,92.207306,91.910065,89.798195,81.20731,88.39027,-0.009632111,0.047826767,0.043168545,0.009632111,-0.13544512,-0.013166904,0.5918202,0.20574424,1.0522282,0.07344764,1.0522282,"up","ZNF317",57693.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:9251058-9272109 (+) // 97.24 // p13.2"]
["11721791_a_at",41.511486,44.760204,40.180298,42.288265,45.32501,43.426884,-0.045912266,0.06279373,-0.09293461,-0.019165516,0.08088446,0.019165516,0.7337066,0.3918946,-1.0369257,-0.052312486,1.0369257,"down","PTPRD",5789.0,"0006470 // protein dephosphorylation // traceable author statement /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0006796 // phosphate-containing compound metabolic process // non-traceable author statement /// 0007157 // heterophilic cell-cell adhesion // inferred from sequence or structural similarity /// 0007185 // transmembrane receptor protein tyrosine phosphatase signaling pathway // traceable author statement /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from sequence or structural similarity /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation /// 0050775 // positive regulation of dendrite morphogenesis // inferred from sequence or structural similarity /// 0097105 // presynaptic membrane assembly // inferred from sequence or structural similarity","0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005001 // transmembrane receptor protein tyrosine phosphatase activity // traceable author statement /// 0005102 // receptor binding // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0050839 // cell adhesion molecule binding // inferred from sequence or structural similarity","chr9:8314246-10612509 (-) // 96.91 // p24.1"]
["11730997_at",10.174856,9.925848,10.230429,10.043096,10.699654,10.323743,-0.003929138,-0.039675474,0.003929138,-0.02273345,0.06862664,0.01702857,0.6806675,0.31305608,-1.0239882,-0.034199156,1.0239882,"down","LRRN1",57633.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr3:3841085-3889900 (+) // 97.23 // p26.2"]
["11761071_at",8.717688,8.3901615,8.9859495,9.401822,10.572211,9.688226,-0.076360226,-0.1316073,-0.032634735,0.032634735,0.20189953,0.07592654,0.31439936,0.034467235,-1.1357833,-0.18368763,1.1357833,"down","HLA-DOB",3112.0,"0002504 // antigen processing and presentation of peptide or polysaccharide antigen via MHC class II // inferred from electronic annotation /// 0006955 // immune response // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0019882 // antigen processing and presentation // inferred from electronic annotation /// 0031295 // T cell costimulation // traceable author statement /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005764 // lysosome // inferred from direct assay /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0042613 // MHC class II protein complex // inferred from electronic annotation","0032395 // MHC class II receptor activity // traceable author statement","chr6:32781741-32784854 (-) // 99.56 // p21.32"]
["11750894_a_at",7.9467125,7.431511,7.9907403,7.508772,7.6248007,8.386803,0.029829502,-0.06687331,0.037800074,-0.051951647,-0.029829264,0.107592106,0.9660673,0.89634037,-1.0058057,-0.008351679,1.0058057,"down","TBX5",6910.0,"0002009 // morphogenesis of an epithelium // inferred from electronic annotation /// 0003166 // bundle of His development // inferred from electronic annotation /// 0003181 // atrioventricular valve morphogenesis // inferred from electronic annotation /// 0003197 // endocardial cushion development // inferred from electronic annotation /// 0003218 // cardiac left ventricle formation // inferred from sequence or structural similarity /// 0003218 // cardiac left ventricle formation // inferred from electronic annotation /// 0003229 // ventricular cardiac muscle tissue development // inferred from electronic annotation /// 0003281 // ventricular septum development // inferred from sequence or structural similarity /// 0003281 // ventricular septum development // inferred from electronic annotation /// 0003283 // atrial septum development // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006917 // induction of apoptosis // inferred from direct assay /// 0007267 // cell-cell signaling // inferred from direct assay /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007389 // pattern specification process // inferred from electronic annotation /// 0007507 // heart development // inferred from direct assay /// 0007507 // heart development // inferred from mutant phenotype /// 0007507 // heart development // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0010467 // gene expression // traceable author statement /// 0010719 // negative regulation of epithelial to mesenchymal transition // traceable author statement /// 0030324 // lung development // inferred from electronic annotation /// 0030326 // embryonic limb morphogenesis // inferred from mutant phenotype /// 0030326 // embryonic limb morphogenesis // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // inferred from direct assay /// 0035115 // embryonic forelimb morphogenesis // inferred from electronic annotation /// 0035117 // embryonic arm morphogenesis // inferred from mutant phenotype /// 0035136 // forelimb morphogenesis // inferred from mutant phenotype /// 0035136 // forelimb morphogenesis // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0051891 // positive regulation of cardioblast differentiation // inferred from direct assay /// 0055007 // cardiac muscle cell differentiation // inferred from electronic annotation /// 0060039 // pericardium development // inferred from direct assay /// 0060044 // negative regulation of cardiac muscle cell proliferation // inferred from direct assay /// 0060045 // positive regulation of cardiac muscle cell proliferation // inferred from electronic annotation /// 0060980 // cell migration involved in coronary vasculogenesis // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement","0000977 // RNA polymerase II regulatory region sequence-specific DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from mutant phenotype /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from direct assay","chr12:114792810-114845846 (-) // 96.13 // q24.21"]
["11753871_a_at",20.367588,19.311834,17.192686,17.604288,17.822847,18.680908,0.15862894,0.081839085,-0.08585119,-0.05171919,-0.03391838,0.03391838,0.75302815,0.42085424,1.0488284,0.068778604,1.0488284,"up","GNG7",2788.0,"0001662 // behavioral fear response // inferred from electronic annotation /// 0006112 // energy reserve metabolic process // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007168 // receptor guanylyl cyclase signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0008277 // regulation of G-protein coupled receptor protein signaling pathway // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045761 // regulation of adenylate cyclase activity // inferred from electronic annotation /// 0071377 // cellular response to glucagon stimulus // traceable author statement","0005834 // heterotrimeric G-protein complex // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation","chr19:2515019-2520686 (-) // 100.0 // p13.3"]
["11719097_a_at",1404.8438,1429.6718,1453.4197,1438.2026,1439.579,1406.601,-0.029565811,-0.0042915344,0.019475937,0.0042915344,0.005671501,-0.027762413,0.98584193,0.952256,1.00079,0.0011392791,1.00079,"up","TAF10",6881.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006352 // transcription initiation, DNA-dependent // inferred from direct assay /// 0006352 // transcription initiation, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred by curator /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // inferred by curator /// 0006367 // transcription initiation from RNA polymerase II promoter // inferred from direct assay /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006368 // transcription elongation from RNA polymerase II promoter // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016578 // histone deubiquitination // inferred from direct assay /// 0043966 // histone H3 acetylation // inferred from direct assay /// 0051260 // protein homooligomerization // inferred from direct assay","0000125 // PCAF complex // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005669 // transcription factor TFIID complex // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0030914 // STAGA complex // inferred from direct assay /// 0033276 // transcription factor TFTC complex // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0004402 // histone acetyltransferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0030331 // estrogen receptor binding // inferred from direct assay /// 0070063 // RNA polymerase binding // inferred from direct assay","chr11:6632075-6633900 (-) // 75.39 // p15.4"]
["11730479_a_at",27.671803,29.498327,27.245188,28.772985,29.498327,34.448814,-0.074257374,0.017959118,-0.096672535,-0.017959118,0.017959118,0.24178028,0.59739584,0.21128666,-1.0954956,-0.13158366,1.0954956,"down","DRD2",1813.0,"0001659 // temperature homeostasis // inferred from electronic annotation /// 0001659 // temperature homeostasis // inferred from sequence or structural similarity /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001963 // synaptic transmission, dopaminergic // inferred from electronic annotation /// 0001964 // startle response // inferred from electronic annotation /// 0001975 // response to amphetamine // inferred from electronic annotation /// 0001975 // response to amphetamine // inferred from sequence or structural similarity /// 0001976 // neurological system process involved in regulation of systemic arterial blood pressure // inferred from electronic annotation /// 0001976 // neurological system process involved in regulation of systemic arterial blood pressure // inferred from sequence or structural similarity /// 0002027 // regulation of heart rate // inferred from electronic annotation /// 0002027 // regulation of heart rate // inferred from sequence or structural similarity /// 0002028 // regulation of sodium ion transport // inferred from electronic annotation /// 0002028 // regulation of sodium ion transport // inferred from sequence or structural similarity /// 0002031 // G-protein coupled receptor internalization // inferred from electronic annotation /// 0002052 // positive regulation of neuroblast proliferation // inferred from electronic annotation /// 0002052 // positive regulation of neuroblast proliferation // inferred from sequence or structural similarity /// 0002092 // positive regulation of receptor internalization // inferred from electronic annotation /// 0006874 // cellular calcium ion homeostasis // inferred by curator /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007188 // adenylate cyclase-modulating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007194 // negative regulation of adenylate cyclase activity // inferred from direct assay /// 0007194 // negative regulation of adenylate cyclase activity // inferred from electronic annotation /// 0007195 // adenylate cyclase-inhibiting dopamine receptor signaling pathway // inferred from direct assay /// 0007195 // adenylate cyclase-inhibiting dopamine receptor signaling pathway // inferred from electronic annotation /// 0007212 // dopamine receptor signaling pathway // inferred from electronic annotation /// 0007243 // intracellular protein kinase cascade // inferred from direct assay /// 0007270 // neuron-neuron synaptic transmission // inferred from sequence or structural similarity /// 0007270 // neuron-neuron synaptic transmission // inferred from electronic annotation /// 0007409 // axonogenesis // inferred from electronic annotation /// 0007409 // axonogenesis // inferred from sequence or structural similarity /// 0007416 // synapse assembly // inferred from electronic annotation /// 0007416 // synapse assembly // inferred from sequence or structural similarity /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from sequence or structural similarity /// 0007616 // long-term memory // inferred from electronic annotation /// 0007625 // grooming behavior // inferred from electronic annotation /// 0007626 // locomotory behavior // inferred from sequence or structural similarity /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0007628 // adult walking behavior // inferred from electronic annotation /// 0007628 // adult walking behavior // inferred from sequence or structural similarity /// 0007631 // feeding behavior // inferred from electronic annotation /// 0008104 // protein localization // inferred from electronic annotation /// 0008104 // protein localization // inferred from sequence or structural similarity /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from sequence or structural similarity /// 0008306 // associative learning // inferred from sequence or structural similarity /// 0008306 // associative learning // inferred from electronic annotation /// 0008542 // visual learning // inferred from electronic annotation /// 0008542 // visual learning // inferred from sequence or structural similarity /// 0009416 // response to light stimulus // inferred from sequence or structural similarity /// 0009416 // response to light stimulus // inferred from electronic annotation /// 0009636 // response to toxin // inferred from electronic annotation /// 0010039 // response to iron ion // inferred from electronic annotation /// 0014059 // regulation of dopamine secretion // inferred from electronic annotation /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0021853 // cerebral cortex GABAergic interneuron migration // inferred from electronic annotation /// 0021853 // cerebral cortex GABAergic interneuron migration // inferred from sequence or structural similarity /// 0021984 // adenohypophysis development // inferred from electronic annotation /// 0021984 // adenohypophysis development // inferred from sequence or structural similarity /// 0030336 // negative regulation of cell migration // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // inferred from sequence or structural similarity /// 0030432 // peristalsis // inferred from electronic annotation /// 0030432 // peristalsis // inferred from sequence or structural similarity /// 0030534 // adult behavior // inferred from electronic annotation /// 0030814 // regulation of cAMP metabolic process // inferred from direct assay /// 0030900 // forebrain development // inferred from electronic annotation /// 0031223 // auditory behavior // inferred from electronic annotation /// 0032147 // activation of protein kinase activity // inferred from electronic annotation /// 0032228 // regulation of synaptic transmission, GABAergic // inferred from electronic annotation /// 0032228 // regulation of synaptic transmission, GABAergic // inferred from sequence or structural similarity /// 0032922 // circadian regulation of gene expression // inferred from electronic annotation /// 0032922 // circadian regulation of gene expression // inferred from sequence or structural similarity /// 0034776 // response to histamine // inferred from direct assay /// 0035094 // response to nicotine // inferred from electronic annotation /// 0035810 // positive regulation of urine volume // inferred from electronic annotation /// 0035815 // positive regulation of renal sodium excretion // inferred from electronic annotation /// 0040018 // positive regulation of multicellular organism growth // inferred from electronic annotation /// 0042220 // response to cocaine // inferred from sequence or structural similarity /// 0042220 // response to cocaine // inferred from electronic annotation /// 0042321 // negative regulation of circadian sleep/wake cycle, sleep // inferred from electronic annotation /// 0042417 // dopamine metabolic process // inferred by curator /// 0042417 // dopamine metabolic process // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042493 // response to drug // inferred from sequence or structural similarity /// 0043266 // regulation of potassium ion transport // inferred from electronic annotation /// 0043266 // regulation of potassium ion transport // inferred from sequence or structural similarity /// 0043278 // response to morphine // inferred from electronic annotation /// 0043278 // response to morphine // inferred from sequence or structural similarity /// 0043408 // regulation of MAPK cascade // inferred from electronic annotation /// 0043473 // pigmentation // inferred from electronic annotation /// 0043666 // regulation of phosphoprotein phosphatase activity // inferred from electronic annotation /// 0045471 // response to ethanol // inferred from electronic annotation /// 0045745 // positive regulation of G-protein coupled receptor protein signaling pathway // inferred from electronic annotation /// 0045776 // negative regulation of blood pressure // inferred from electronic annotation /// 0045776 // negative regulation of blood pressure // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046488 // phosphatidylinositol metabolic process // inferred from electronic annotation /// 0046488 // phosphatidylinositol metabolic process // inferred from sequence or structural similarity /// 0046676 // negative regulation of insulin secretion // inferred from electronic annotation /// 0046717 // acid secretion // inferred from electronic annotation /// 0048148 // behavioral response to cocaine // inferred from electronic annotation /// 0048148 // behavioral response to cocaine // inferred from sequence or structural similarity /// 0048149 // behavioral response to ethanol // inferred from electronic annotation /// 0048149 // behavioral response to ethanol // inferred from sequence or structural similarity /// 0048169 // regulation of long-term neuronal synaptic plasticity // inferred from electronic annotation /// 0048169 // regulation of long-term neuronal synaptic plasticity // inferred from sequence or structural similarity /// 0048678 // response to axon injury // inferred from electronic annotation /// 0048755 // branching morphogenesis of a nerve // inferred from electronic annotation /// 0048755 // branching morphogenesis of a nerve // inferred from sequence or structural similarity /// 0050482 // arachidonic acid secretion // inferred from direct assay /// 0050709 // negative regulation of protein secretion // inferred from direct assay /// 0050804 // regulation of synaptic transmission // inferred from electronic annotation /// 0051209 // release of sequestered calcium ion into cytosol // inferred from electronic annotation /// 0051209 // release of sequestered calcium ion into cytosol // inferred from sequence or structural similarity /// 0051481 // reduction of cytosolic calcium ion concentration // inferred from electronic annotation /// 0051482 // elevation of cytosolic calcium ion concentration involved in phospholipase C-activating G-protein coupled signaling pathway // inferred from direct assay /// 0051584 // regulation of dopamine uptake involved in synaptic transmission // inferred by curator /// 0051584 // regulation of dopamine uptake involved in synaptic transmission // inferred from electronic annotation /// 0051586 // positive regulation of dopamine uptake involved in synaptic transmission // inferred from electronic annotation /// 0051586 // positive regulation of dopamine uptake involved in synaptic transmission // inferred from sequence or structural similarity /// 0051898 // negative regulation of protein kinase B signaling cascade // inferred from electronic annotation /// 0051898 // negative regulation of protein kinase B signaling cascade // inferred from sequence or structural similarity /// 0051927 // negative regulation of calcium ion transport via voltage-gated calcium channel activity // inferred from direct assay /// 0051927 // negative regulation of calcium ion transport via voltage-gated calcium channel activity // inferred from electronic annotation /// 0051967 // negative regulation of synaptic transmission, glutamatergic // inferred from electronic annotation /// 0051967 // negative regulation of synaptic transmission, glutamatergic // inferred from sequence or structural similarity /// 0060124 // positive regulation of growth hormone secretion // inferred from electronic annotation /// 0060124 // positive regulation of growth hormone secretion // inferred from sequence or structural similarity /// 0060134 // prepulse inhibition // inferred from electronic annotation /// 0060134 // prepulse inhibition // inferred from sequence or structural similarity /// 0060158 // phospholipase C-activating dopamine receptor signaling pathway // inferred from electronic annotation /// 0060158 // phospholipase C-activating dopamine receptor signaling pathway // inferred from genetic interaction /// 0060160 // negative regulation of dopamine receptor signaling pathway // inferred from electronic annotation /// 0060160 // negative regulation of dopamine receptor signaling pathway // inferred from sequence or structural similarity /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from electronic annotation","0001669 // acrosomal vesicle // inferred from electronic annotation /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred by curator /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016328 // lateral plasma membrane // inferred from electronic annotation /// 0019861 // flagellum // inferred from electronic annotation /// 0030139 // endocytic vesicle // inferred from electronic annotation /// 0030424 // axon // inferred from sequence or structural similarity /// 0030424 // axon // inferred from electronic annotation /// 0030425 // dendrite // inferred from sequence or structural similarity /// 0030425 // dendrite // inferred from electronic annotation /// 0030672 // synaptic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from electronic annotation /// 0043204 // perikaryon // inferred from electronic annotation /// 0043679 // axon terminus // inferred from electronic annotation","0001591 // dopamine receptor activity, coupled via Gi/Go // inferred from direct assay /// 0001591 // dopamine receptor activity, coupled via Gi/Go // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004952 // dopamine receptor activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008144 // drug binding // inferred from direct assay /// 0008144 // drug binding // inferred from electronic annotation /// 0015459 // potassium channel regulator activity // non-traceable author statement /// 0035240 // dopamine binding // inferred from electronic annotation /// 0035255 // ionotropic glutamate receptor binding // inferred from electronic annotation","chr11:113280335-113346111 (-) // 93.96 // q23.2"]
["11759920_at",68.89838,60.390423,51.82354,57.468098,65.05546,73.661644,0.13647509,-0.053675175,-0.27438736,-0.12523365,0.053675175,0.23291874,0.7958352,0.49640003,-1.0849656,-0.11764928,1.0849656,"down","PHC3",80012.0,"0007275 // multicellular organismal development // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0031519 // PcG protein complex // inferred from direct assay /// 0035102 // PRC1 complex // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:169887507-169896726 (-) // 70.66 // q26.2"]
["11740041_at",15.117674,15.655298,16.364931,13.367995,16.334734,18.376007,-0.081061125,-0.030646086,0.033310413,-0.25851417,0.030645847,0.20052624,0.9708074,0.9078164,-1.011866,-0.01701821,1.011866,"down","ATP10A",57194.0,"0006812 // cation transport // inferred from electronic annotation /// 0008360 // regulation of cell shape // non-traceable author statement /// 0015914 // phospholipid transport // inferred from electronic annotation /// 0034220 // ion transmembrane transport // traceable author statement /// 0045332 // phospholipid translocation // non-traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0004012 // phospholipid-translocating ATPase activity // non-traceable author statement /// 0004012 // phospholipid-translocating ATPase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0015662 // ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016820 // hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr15:25922419-26108870 (-) // 98.24 // q12"]
["11738645_a_at",21.599253,23.108736,20.4992,24.440466,24.338861,22.205214,-0.06868696,0.02876997,-0.14410067,0.109603405,0.10359335,-0.02876997,0.52194273,0.1425216,-1.0888573,-0.122814886,1.0888573,"down","SLC26A5",375611.0,"0007605 // sensory perception of sound // inferred from mutant phenotype /// 0007605 // sensory perception of sound // inferred from electronic annotation /// 0008272 // sulfate transport // inferred from electronic annotation /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0042391 // regulation of membrane potential // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0016328 // lateral plasma membrane // inferred from electronic annotation","0008271 // secondary active sulfate transmembrane transporter activity // inferred from electronic annotation /// 0015116 // sulfate transmembrane transporter activity // inferred from electronic annotation /// 0030507 // spectrin binding // inferred from electronic annotation","chr7:102993111-103086598 (-) // 87.62 // q22.1"]
["11722217_x_at",237.48108,234.5631,228.4298,255.65678,243.457,257.4578,-0.01792717,-0.03576374,-0.073988914,0.088468075,0.01792717,0.098596096,0.2653518,0.021548612,-1.0798945,-0.11089043,1.0798945,"down","GPR108",56927.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation","chr19:6729924-6737620 (-) // 93.86 // p13.3"]
["11725016_at",5.4980917,5.133245,5.6976852,4.863253,5.539108,5.9787493,-0.0053613186,-0.10442114,0.04608369,-0.18237066,0.0053613186,0.11555123,0.99812955,0.99425715,-1.0005178,-7.468992E-4,1.0005178,"down","MAP9",79884.0,"0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation","","chr4:156263809-156298122 (-) // 85.16 // q32.1"]
["11731209_s_at",46.326225,49.35657,55.04701,50.047646,61.923435,50.24355,-0.11429119,-0.02287817,0.13454342,-0.0028181076,0.30436516,0.0028181076,0.7756709,0.45831135,-1.0735061,-0.10233041,1.0735061,"down","C15orf59",388135.0,"","","","chr15:74032140-74043943 (-) // 92.13 // q24.1"]
["11737403_at",58.85658,57.12191,44.14815,56.19877,57.396854,64.88568,0.039695263,-0.0034637451,-0.37515545,-0.02696991,0.0034637451,0.18039179,0.68800056,0.322914,-1.1213758,-0.16526984,1.1213758,"down","TMEM89",440955.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr3:48658191-48659288 (-) // 99.85 // p21.31"]
["11717927_at",222.76538,224.52576,221.0655,218.05928,205.42737,214.00064,0.020928383,0.032283783,0.009876728,-0.009876728,-0.0959692,-0.036981583,0.38262615,0.058964476,1.0487267,0.06863873,1.0487267,"up","FOXK2",3607.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0007389 // pattern specification process // not recorded /// 0009790 // embryo development // not recorded /// 0009888 // tissue development // not recorded /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // not recorded","0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // not recorded /// 0005730 // nucleolus // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0000287 // magnesium ion binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // not recorded /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // not recorded /// 0008134 // transcription factor binding // not recorded /// 0008301 // DNA binding, bending // not recorded /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:80477593-80562483 (+) // 92.44 // q25.3"]
["11740095_a_at",6.660696,6.7317753,6.5875034,7.4121428,6.7317753,6.7317753,-0.015314102,0.0,-0.031255245,0.13890338,0.0,0.0,0.6389835,0.26017475,-1.0437847,-0.06182421,1.0437847,"down","LRRC2",79442.0,"","","","chr3:46556879-46608040 (-) // 69.36 // p21.31"]
["11729289_a_at",9.9545145,10.993939,10.278961,10.143605,9.752653,10.949173,-0.036709547,0.106576204,0.0095620155,-0.009561777,-0.06626582,0.10068941,0.93036366,0.792527,1.0126874,0.01818897,1.0126874,"up","BMX",660.0,"0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006921 // cellular component disassembly involved in apoptotic process // traceable author statement /// 0006950 // response to stress // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007165 // signal transduction // inferred from direct assay /// 0007165 // signal transduction // traceable author statement /// 0007498 // mesoderm development // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0046777 // protein autophosphorylation // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0032587 // ruffle membrane // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // traceable author statement /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004715 // non-membrane spanning protein tyrosine kinase activity // inferred from direct assay /// 0004715 // non-membrane spanning protein tyrosine kinase activity // inferred from electronic annotation /// 0004871 // signal transducer activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chrX:15518697-15574652 (+) // 99.11 // p22.2"]
["11757788_s_at",25.469128,23.126692,23.158855,25.570328,24.786695,28.955315,0.019591808,-0.119598866,-0.117593765,0.0253129,-0.019591808,0.20467043,0.54314613,0.15903527,-1.1039418,-0.1426641,1.1039418,"down","DDR2",4921.0,"0001503 // ossification // inferred from electronic annotation /// 0003416 // endochondral bone growth // inferred from electronic annotation /// 0003416 // endochondral bone growth // inferred from sequence or structural similarity /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0010715 // regulation of extracellular matrix disassembly // traceable author statement /// 0010763 // positive regulation of fibroblast migration // inferred from electronic annotation /// 0010763 // positive regulation of fibroblast migration // inferred from sequence or structural similarity /// 0010763 // positive regulation of fibroblast migration // traceable author statement /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0030199 // collagen fibril organization // inferred from sequence or structural similarity /// 0030500 // regulation of bone mineralization // inferred from mutant phenotype /// 0031214 // biomineral tissue development // inferred from sequence or structural similarity /// 0035988 // chondrocyte proliferation // inferred from electronic annotation /// 0035988 // chondrocyte proliferation // inferred from sequence or structural similarity /// 0035988 // chondrocyte proliferation // traceable author statement /// 0038063 // collagen-activated tyrosine kinase receptor signaling pathway // inferred from direct assay /// 0045669 // positive regulation of osteoblast differentiation // inferred from mutant phenotype /// 0045860 // positive regulation of protein kinase activity // inferred from mutant phenotype /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0048146 // positive regulation of fibroblast proliferation // inferred from electronic annotation /// 0048146 // positive regulation of fibroblast proliferation // inferred from sequence or structural similarity /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from mutant phenotype /// 0090091 // positive regulation of extracellular matrix disassembly // inferred from electronic annotation /// 0090091 // positive regulation of extracellular matrix disassembly // inferred from sequence or structural similarity","0005887 // integral to plasma membrane // traceable author statement","0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from direct assay /// 0005518 // collagen binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0038062 // protein tyrosine kinase collagen receptor activity // inferred from direct assay /// 0038062 // protein tyrosine kinase collagen receptor activity // inferred from electronic annotation","chr1:162755999-162756409 (+) // 97.85 // q23.3 /// chr10:38640803-38641213 (+) // 96.42 // p11.1"]
["11754175_x_at",7.433303,7.3347244,8.418734,8.172083,7.397874,8.120126,-0.06374931,-0.08300996,0.11585045,0.07295108,-0.07064223,0.06374931,0.8922761,0.70165205,-1.022657,-0.032322396,1.022657,"down","LOC100508797",1.00508797E8,"","","","chr14:106174931-106586667 (-) // 80.2 // q32.33"]
["11747205_a_at",112.196106,115.4958,100.774734,121.18283,122.32064,118.707344,-0.061602116,-0.01978445,-0.21649075,0.049560547,0.06304312,0.019784927,0.4236016,0.07900674,-1.1045219,-0.14342198,1.1045219,"down","PDK2",5164.0,"0000160 // two-component signal transduction system (phosphorelay) // inferred from electronic annotation /// 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006006 // glucose metabolic process // inferred from electronic annotation /// 0006006 // glucose metabolic process // traceable author statement /// 0006090 // pyruvate metabolic process // traceable author statement /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0010510 // regulation of acetyl-CoA biosynthetic process from pyruvate // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018106 // peptidyl-histidine phosphorylation // inferred from electronic annotation /// 0023014 // signal transduction by phosphorylation // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement /// 0005759 // mitochondrial matrix // inferred from electronic annotation /// 0045254 // pyruvate dehydrogenase complex // inferred from electronic annotation","0000155 // two-component sensor activity // inferred from electronic annotation /// 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004673 // protein histidine kinase activity // inferred from electronic annotation /// 0004740 // pyruvate dehydrogenase (acetyl-transferring) kinase activity // inferred from electronic annotation /// 0004740 // pyruvate dehydrogenase (acetyl-transferring) kinase activity // traceable author statement /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0032403 // protein complex binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr17:48172739-48187763 (+) // 99.8 // q21.33"]
["11736506_at",5.1363354,5.3240643,4.8948197,6.036169,5.4513345,6.023247,-0.06882906,-0.01704073,-0.13831282,0.16406465,0.01704073,0.16097283,0.31439936,0.034455672,-1.1397786,-0.18875362,1.1397786,"down","TECRL",253017.0,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016627 // oxidoreductase activity, acting on the CH-CH group of donors // inferred from electronic annotation","chr4:65143424-65275398 (-) // 57.91 // q13.1"]
["11739050_s_at",8.055159,6.6486034,6.73719,7.882975,6.436932,6.9242587,0.23800969,-0.038851976,-0.019756317,0.20683694,-0.08553004,0.019756317,0.97554404,0.92263263,1.0088973,0.01277933,1.0088973,"up","ACPP",55.0,"","0005576 // extracellular region // inferred from electronic annotation /// 0005622 // intracellular // inferred from direct assay /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0003993 // acid phosphatase activity // inferred from electronic annotation /// 0008253 // 5'-nucleotidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr3:132036212-132077761 (+) // 83.09 // q22.1"]
["11720766_a_at",1305.2299,1297.4087,1314.1522,1294.0118,1364.2495,1280.5204,0.0043354034,-0.0043354034,0.014163971,-0.008117676,0.068139076,-0.023238182,0.9356828,0.8062652,-1.0052398,-0.007539761,1.0052398,"down","METTL9",51108.0,"","","0005515 // protein binding // inferred from physical interaction","chr16:21610697-21669144 (+) // 98.5 // p12.2"]
["11715194_s_at",24.864801,26.540024,25.045095,26.138416,25.274158,24.864801,-0.016990662,0.07707405,-0.006567478,0.055076122,0.006567478,-0.016990662,0.98193234,0.9394704,1.0020499,0.0029543866,1.0020499,"up","ZNF835",90485.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:57174952-57176628 (-) // 99.4 // q13.43"]
["11738629_a_at",35.761787,36.750736,37.24971,34.061493,32.60332,32.385075,0.035138607,0.07449293,0.09394884,-0.035138607,-0.09826136,-0.107951164,0.17152515,0.006614609,1.1082709,0.14831054,1.1082709,"up","ACPL2",92370.0,"","0005576 // extracellular region // inferred from electronic annotation","0003993 // acid phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr3:140950681-141013745 (+) // 90.58 // q23"]
["11736841_a_at",10.573719,11.5272875,11.893413,12.050408,15.0519905,10.035739,-0.147125,-0.022554874,0.022554874,0.041474342,0.36234665,-0.22246099,0.8330668,0.56868637,-1.0788505,-0.10949497,1.0788505,"down","KLRAP1",10748.0,"0007166 // cell surface receptor signaling pathway // traceable author statement","0005886 // plasma membrane // traceable author statement","0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // traceable author statement /// 0030246 // carbohydrate binding // inferred from electronic annotation /// 0030246 // carbohydrate binding // traceable author statement","chr12:10741055-10752661 (-) // 68.51 // p13.2"]
["11763922_at",45.0757,41.252502,45.886566,38.78001,43.72214,40.294857,0.08592701,-0.041941166,0.11164904,-0.13110971,0.041941166,-0.07582712,0.5859575,0.2000168,1.0768944,0.10687679,1.0768944,"up","SNORA71C",677839.0,"","","","chr20:37058094-37058448 (-) // 99.72 // q11.23"]
["11740396_a_at",10.258432,11.081521,10.357244,10.267256,10.407993,11.516034,-0.017355919,0.09398985,-0.0035259724,-0.016115427,0.0035259724,0.14947796,0.9143569,0.75234497,-1.0148456,-0.021260263,1.0148456,"down","NLRP12",91662.0,"0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // non-traceable author statement /// 0007165 // signal transduction // non-traceable author statement /// 0008588 // release of cytoplasmic sequestered NF-kappaB // inferred from direct assay /// 0009968 // negative regulation of signal transduction // inferred from direct assay /// 0031953 // negative regulation of protein autophosphorylation // inferred from direct assay /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0043124 // negative regulation of I-kappaB kinase/NF-kappaB cascade // inferred from direct assay /// 0045381 // regulation of interleukin-18 biosynthetic process // non-traceable author statement /// 0045409 // negative regulation of interleukin-6 biosynthetic process // inferred from direct assay /// 0045751 // negative regulation of Toll signaling pathway // inferred from direct assay /// 0050710 // negative regulation of cytokine secretion // inferred from direct assay /// 0050711 // negative regulation of interleukin-1 secretion // inferred from direct assay /// 0050718 // positive regulation of interleukin-1 beta secretion // non-traceable author statement /// 0050728 // negative regulation of inflammatory response // inferred from mutant phenotype /// 0050729 // positive regulation of inflammatory response // non-traceable author statement","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008656 // cysteine-type endopeptidase activator activity involved in apoptotic process // non-traceable author statement","chr19:54296856-54327648 (-) // 92.23 // q13.42"]
["11733820_at",28.444996,29.756187,28.470297,29.889137,29.249874,27.094797,-0.02076912,0.04424572,-0.019486427,0.0506773,0.019486427,-0.09092808,0.95832306,0.87191075,1.0057359,0.008251475,1.0057359,"up","CHRNA2",1135.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // non-traceable author statement /// 0006811 // ion transport // inferred from electronic annotation /// 0007165 // signal transduction // inferred from direct assay /// 0007268 // synaptic transmission // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005892 // acetylcholine-gated channel complex // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004889 // acetylcholine-activated cation-selective channel activity // inferred from direct assay /// 0004889 // acetylcholine-activated cation-selective channel activity // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005230 // extracellular ligand-gated ion channel activity // inferred from electronic annotation /// 0015464 // acetylcholine receptor activity // inferred from direct assay","chr8:27317278-27336813 (-) // 96.06 // p21.2"]
["11745788_a_at",14.343827,14.494717,15.014045,13.200322,13.6443815,14.300419,0.00218606,0.01728344,0.06806898,-0.117670536,-0.06993675,-0.0021862984,0.41960928,0.07670001,1.0661749,0.09244408,1.0661749,"up","MUC12",10071.0,"0001558 // regulation of cell growth // non-traceable author statement /// 0016266 // O-glycan processing // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005796 // Golgi lumen // traceable author statement /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr7:100634912-100662230 (+) // 99.25 // q22.1"]
["11758936_at",58.834156,60.757862,51.952885,61.403114,61.770123,76.01563,-0.05403757,-0.0076208115,-0.23348808,0.0076203346,0.016217232,0.31560373,0.5433164,0.1591764,-1.1579149,-0.2115292,1.1579149,"down","HNRNPR",10236.0,"0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0006397 // mRNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0030530 // heterogeneous nuclear ribonucleoprotein complex // traceable author statement /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr1:23630893-23670857 (-) // 97.44 // p36.12"]
["11721984_at",74.6087,72.26904,70.202705,61.51431,68.037056,66.73298,0.11042023,0.06445408,0.022602558,-0.16800165,-0.022602558,-0.050523758,0.3513322,0.04629661,1.106652,0.14620164,1.106652,"up","C7orf29",113763.0,"","","","chr7:150026875-150029810 (+) // 95.13 // q36.1"]
["11742951_at",857.7381,841.7261,905.0428,846.5349,853.03644,817.12756,0.013448715,-0.0137376785,0.09089756,-0.0055189133,0.0055189133,-0.056527138,0.63283175,0.25250357,1.03458,0.049045198,1.03458,"up","MED10",84246.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0016592 // mediator complex // inferred from electronic annotation","0001104 // RNA polymerase II transcription cofactor activity // inferred from electronic annotation","chr5:6371997-6378707 (-) // 94.9 // p15.31"]
["11730253_a_at",259.82812,254.70735,268.37396,265.68933,249.69879,256.8737,0.008249283,-0.020467758,0.05493641,0.040431976,-0.049118996,-0.008249283,0.84235305,0.5895505,1.0138785,0.019884724,1.0138785,"up","AHCTF1",25909.0,"0000087 // M phase of mitotic cell cycle // traceable author statement /// 0000236 // mitotic prometaphase // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0000910 // cytokinesis // inferred from mutant phenotype /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0051028 // mRNA transport // inferred from electronic annotation /// 0051292 // nuclear pore complex assembly // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from direct assay /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0000785 // chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005643 // nuclear pore // inferred from direct assay /// 0005643 // nuclear pore // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016363 // nuclear matrix // inferred from electronic annotation /// 0031080 // nuclear pore outer ring // inferred from direct assay /// 0031965 // nuclear membrane // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation","chr1:247002399-247094665 (-) // 99.34 // q44"]
["11754846_a_at",105.05233,107.109795,108.28044,96.78452,105.05233,94.661156,0.0,0.027982235,0.04366398,-0.11826038,0.0,-0.15026331,0.41654313,0.07518774,1.0817671,0.1133899,1.0817671,"up","MLLT10",8028.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr10:21823677-21962972 (+) // 96.47 // p12.31"]
["11749165_a_at",9.713818,10.537547,9.223706,10.545547,9.470248,10.644805,-0.05871439,0.05871439,-0.13340616,0.059809208,-0.095350504,0.07332492,0.8002829,0.50401384,-1.0403459,-0.057063293,1.0403459,"down","GLT1D1",144423.0,"0009058 // biosynthetic process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay","0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation","chr12:129338038-129468597 (+) // 97.42 // q24.33"]
["11740509_a_at",29.028917,34.90054,31.117666,32.492207,30.203625,34.20649,-0.131423,0.13433552,-0.031179905,0.031179905,-0.07419205,0.10535622,0.9187942,0.7625276,-1.0211564,-0.030203888,1.0211564,"down","ARHGAP26",23092.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007399 // nervous system development // non-traceable author statement /// 0030036 // actin cytoskeleton organization // non-traceable author statement /// 0032321 // positive regulation of Rho GTPase activity // non-traceable author statement /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0046847 // filopodium assembly // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005100 // Rho GTPase activator activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0008093 // cytoskeletal adaptor activity // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from electronic annotation","chr5:142149967-142608572 (+) // 86.49 // q31.3"]
["11720817_a_at",9.4210415,9.53831,8.991759,8.809683,9.835208,9.758509,-0.008923531,0.008923531,-0.076206684,-0.10572028,0.05314541,0.041850567,0.90173507,0.72292197,-1.0152447,-0.021827526,1.0152447,"down","BAALC",79870.0,"","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation","","chr8:104152602-104242700 (+) // 89.78 // q22.3"]
["11727412_a_at",68.359024,59.666843,57.764866,55.898514,61.01184,66.1368,0.18012238,-0.016079426,-0.06281662,-0.11019945,0.016079903,0.13244438,0.9499025,0.84748775,1.0146395,0.020967226,1.0146395,"up","CLN8",2055.0,"0001306 // age-dependent response to oxidative stress // inferred from electronic annotation /// 0006644 // phospholipid metabolic process // inferred from mutant phenotype /// 0006644 // phospholipid metabolic process // inferred from electronic annotation /// 0006672 // ceramide metabolic process // inferred from mutant phenotype /// 0006869 // lipid transport // non-traceable author statement /// 0007006 // mitochondrial membrane organization // inferred from electronic annotation /// 0007040 // lysosome organization // inferred from electronic annotation /// 0007399 // nervous system development // inferred from mutant phenotype /// 0007601 // visual perception // inferred from electronic annotation /// 0007628 // adult walking behavior // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // inferred from mutant phenotype /// 0008219 // cell death // inferred from electronic annotation /// 0008306 // associative learning // inferred from electronic annotation /// 0008344 // adult locomotory behavior // inferred from electronic annotation /// 0008361 // regulation of cell size // inferred from electronic annotation /// 0008610 // lipid biosynthetic process // non-traceable author statement /// 0021522 // spinal cord motor neuron differentiation // inferred from electronic annotation /// 0021523 // somatic motor neuron differentiation // inferred from electronic annotation /// 0030163 // protein catabolic process // non-traceable author statement /// 0035176 // social behavior // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0044257 // cellular protein catabolic process // inferred from electronic annotation /// 0044265 // cellular macromolecule catabolic process // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // inferred from electronic annotation /// 0045494 // photoreceptor cell maintenance // inferred from electronic annotation /// 0045861 // negative regulation of proteolysis // non-traceable author statement /// 0046513 // ceramide biosynthetic process // non-traceable author statement /// 0050881 // musculoskeletal movement // inferred from electronic annotation /// 0050884 // neuromuscular process controlling posture // inferred from electronic annotation /// 0050885 // neuromuscular process controlling balance // inferred from electronic annotation /// 0051348 // negative regulation of transferase activity // inferred from electronic annotation /// 0051935 // glutamate uptake involved in synaptic transmission // inferred from electronic annotation /// 0060041 // retina development in camera-type eye // inferred from electronic annotation /// 0060052 // neurofilament cytoskeleton organization // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0033116 // endoplasmic reticulum-Golgi intermediate compartment membrane // inferred from electronic annotation","","chr8:1711869-1734735 (+) // 76.41 // p23.3"]
["11753574_at",7.3856487,7.258659,7.0262694,7.492778,7.7634115,7.1550913,0.0125107765,-0.0125107765,-0.059454918,0.03328681,0.08447671,-0.033243656,0.6687847,0.29724666,-1.0338247,-0.04799155,1.0338247,"down","RAB9BP1",9366.0,"","","","chr5:104435174-104435799 (+) // 98.56 // q21.2"]
["11728962_at",33.72693,33.420902,35.50821,38.286358,38.786392,37.312675,-0.11000824,-0.123158455,-0.035756588,0.072921276,0.091641426,0.035756588,0.18070155,0.007919799,-1.1145135,-0.1564141,1.1145135,"down","CTU1",90353.0,"0002098 // tRNA wobble uridine modification // non-traceable author statement /// 0008033 // tRNA processing // inferred from electronic annotation /// 0034227 // tRNA thio-modification // non-traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // inferred from sequence or structural similarity","0000049 // tRNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr19:51600862-51611666 (-) // 82.0 // q13.41"]
["11760501_a_at",46.340145,46.340145,51.594795,43.19055,43.836407,50.56406,0.0,0.0,0.15496302,-0.101546764,-0.08013296,0.12584972,0.7854856,0.47405836,1.049909,0.07026428,1.049909,"up","WSB1",26118.0,"0016310 // phosphorylation // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from direct assay /// 0005622 // intracellular // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0016301 // kinase activity // inferred from electronic annotation","chr17:25621139-25635216 (+) // 98.48 // q11.1"]
["11750810_a_at",15.18792,17.695995,13.843929,14.530975,15.101758,13.675977,0.036000013,0.2564988,-0.09767079,-0.027792454,0.027792454,-0.11527991,0.7430592,0.40574408,1.0742794,0.103369296,1.0742794,"up","PTPN5",84867.0,"0006470 // protein dephosphorylation // traceable author statement /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // traceable author statement /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0001784 // phosphotyrosine binding // inferred from direct assay /// 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // traceable author statement /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation","chr11:18750112-18793619 (-) // 97.15 // p15.1"]
["11715931_s_at",2018.3304,1993.0708,1993.2026,2086.585,2027.8577,2170.9622,-0.003396988,-0.021566391,-0.021471024,0.044584274,0.003396988,0.10177517,0.438655,0.08833443,-1.0463728,-0.065396905,1.0463728,"down","SGK1",6446.0,"0001558 // regulation of cell growth // traceable author statement /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006814 // sodium ion transport // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0006950 // response to stress // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007154 // cell communication // inferred from electronic annotation /// 0007616 // long-term memory // traceable author statement /// 0008217 // regulation of blood pressure // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030334 // regulation of cell migration // traceable author statement /// 0032411 // positive regulation of transporter activity // traceable author statement /// 0042127 // regulation of cell proliferation // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0050790 // regulation of catalytic activity // traceable author statement /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // traceable author statement /// 0060453 // regulation of gastric acid secretion // traceable author statement /// 0070294 // renal sodium ion absorption // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0005246 // calcium channel regulator activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0015459 // potassium channel regulator activity // traceable author statement /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0017080 // sodium channel regulator activity // traceable author statement /// 0017081 // chloride channel regulator activity // traceable author statement /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation","chr6:134490385-134639250 (-) // 96.41 // q23.2"]
["11738437_at",6.2939873,6.508729,6.151914,5.533095,6.649933,5.843826,0.016469479,0.06487107,-0.01646924,-0.16941786,0.09583521,-0.09059143,0.74266934,0.40511796,1.0543461,0.0763485,1.0543461,"up","SRY",6736.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007548 // sex differentiation // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030238 // male sex determination // non-traceable author statement /// 0030238 // male sex determination // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // non-traceable author statement /// 2000020 // positive regulation of male gonad development // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from physical interaction","chrY:2654895-2655792 (-) // 100.0 // p11.31"]
["11751033_a_at",73.66072,83.018936,81.66081,83.873985,82.70732,84.808,-0.1698327,0.0027127266,-0.021084309,0.017495632,-0.0027127266,0.03347206,0.6109716,0.22507532,-1.0561537,-0.07881974,1.0561537,"down","ABHD8",79575.0,"0008152 // metabolic process // inferred from electronic annotation","","0003824 // catalytic activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr19:17403185-17414235 (-) // 96.93 // p13.11"]
["11754934_a_at",782.781,765.879,798.2799,765.1847,742.2821,753.0075,0.032146454,6.542206E-4,0.060432434,-6.542206E-4,-0.04449463,-0.023797989,0.3963528,0.065013416,1.0381824,0.054059904,1.0381824,"up","PTGES2",80142.0,"0001516 // prostaglandin biosynthetic process // inferred from electronic annotation /// 0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0045454 // cell redox homeostasis // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0046903 // secretion // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0015035 // protein disulfide oxidoreductase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation /// 0050220 // prostaglandin-E synthase activity // inferred from electronic annotation","chr9:130882972-130890008 (-) // 93.97 // q34.11"]
["11743646_at",7.8428907,7.1001577,8.697558,7.848091,9.54354,8.083508,-0.022276163,-0.16581059,0.12694883,-0.021319866,0.2608626,0.021319866,0.75813997,0.42825618,-1.0772353,-0.10733347,1.0772353,"down","C17orf105",284067.0,"","","","chr17:41857802-42647782 (+) // 29.4 // q21.31"]
["11761040_at",11.726957,10.6566725,12.010588,10.607476,11.366433,11.436472,0.040617943,-0.09745383,0.07509589,-0.104129314,-0.0044312477,0.0044312477,0.82609826,0.5535819,1.0286815,0.040796388,1.0286815,"up","UPP1",7378.0,"0006139 // nucleobase-containing compound metabolic process // traceable author statement /// 0006206 // pyrimidine base metabolic process // traceable author statement /// 0006220 // pyrimidine nucleotide metabolic process // inferred from electronic annotation /// 0009116 // nucleoside metabolic process // inferred from electronic annotation /// 0009166 // nucleotide catabolic process // inferred from electronic annotation /// 0043097 // pyrimidine nucleoside salvage // traceable author statement /// 0044206 // UMP salvage // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046108 // uridine metabolic process // inferred from electronic annotation /// 0046135 // pyrimidine nucleoside catabolic process // traceable author statement /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0003824 // catalytic activity // inferred from electronic annotation /// 0004850 // uridine phosphorylase activity // inferred from electronic annotation /// 0004850 // uridine phosphorylase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0016763 // transferase activity, transferring pentosyl groups // inferred from electronic annotation","chr7:48128823-48143567 (+) // 93.31 // p12.3"]
["11757055_x_at",130.09235,145.04071,111.33006,148.73152,132.90593,137.9247,-0.057607174,0.09931469,-0.28230047,0.13556719,-0.02673769,0.026737213,0.71199965,0.35718903,-1.0907999,-0.1253865,1.0907999,"down","SH3BP5L",80851.0,"","","","chr1:249104649-249105099 (-) // 100.0 // q44"]
["11721915_a_at",247.2013,242.80023,252.86583,247.61491,253.07796,237.75133,-0.0012059212,-0.027122498,0.03147936,0.0012059212,0.03268957,-0.05743885,0.9296598,0.79083663,1.0061867,0.008898059,1.0061867,"up","MDM4",4194.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006461 // protein complex assembly // inferred from direct assay /// 0006915 // apoptotic process // inferred from expression pattern /// 0008283 // cell proliferation // inferred from expression pattern /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0042177 // negative regulation of protein catabolic process // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0045023 // G0 to G1 transition // inferred from expression pattern /// 0050821 // protein stabilization // inferred from expression pattern /// 0071157 // negative regulation of cell cycle arrest // inferred from electronic annotation /// 0071456 // cellular response to hypoxia // inferred from expression pattern","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008270 // zinc ion binding // traceable author statement /// 0019899 // enzyme binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:204485510-204527248 (+) // 61.4 // q32.1"]
["11742058_a_at",27.34739,29.312044,34.385155,30.970354,27.643381,27.549334,-0.057810783,0.04227972,0.27257204,0.12167406,-0.04227972,-0.04719639,0.8196787,0.541582,1.0533228,0.07494762,1.0533228,"up","ECE2",9718.0,"0006508 // proteolysis // inferred from electronic annotation /// 0007267 // cell-cell signaling // traceable author statement /// 0007420 // brain development // inferred from sequence or structural similarity /// 0007507 // heart development // inferred from sequence or structural similarity /// 0008152 // metabolic process // inferred from electronic annotation /// 0010002 // cardioblast differentiation // inferred from sequence or structural similarity /// 0016486 // peptide hormone processing // inferred from direct assay /// 0032259 // methylation // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from direct assay","0003824 // catalytic activity // inferred from electronic annotation /// 0004222 // metalloendopeptidase activity // inferred from direct assay /// 0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:183993798-184010818 (+) // 96.6 // q27.1"]
["11761324_at",17.113785,18.558182,19.755325,18.712206,17.52921,18.676031,-0.12146282,-0.0045661926,0.08561993,0.007358074,-0.08686066,0.0045661926,0.9586884,0.87282306,1.0080094,0.011509141,1.0080094,"up","LOC100507646",1.00507646E8,"","","","chr19:40779395-40781458 (-) // 46.94 // q13.2"]
["11763385_x_at",579.3412,567.37134,594.8185,533.85693,535.3274,533.1587,0.07205582,0.04193592,0.11009216,-0.04590416,-0.04193592,-0.047792435,0.14095429,0.0037490772,1.0866636,0.1199054,1.0866636,"up","RPL7L1",285855.0,"0006412 // translation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005840 // ribosome // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003735 // structural constituent of ribosome // inferred from electronic annotation","chr6:42851188-42857179 (+) // 77.1 // p21.1"]
["11748231_a_at",35.197105,33.353775,33.72411,24.272242,30.21351,36.22393,0.06964159,-0.007965088,0.007965088,-0.4665079,-0.15062141,0.11112785,0.6850876,0.31877995,1.1422521,0.19188108,1.1422521,"up","UNC13B",10497.0,"0006887 // exocytosis // inferred from electronic annotation /// 0006917 // induction of apoptosis // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007268 // synaptic transmission // inferred from electronic annotation /// 0007588 // excretion // traceable author statement /// 0016081 // synaptic vesicle docking involved in exocytosis // inferred from electronic annotation /// 0016082 // synaptic vesicle priming // inferred from electronic annotation /// 0035249 // synaptic transmission, glutamatergic // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0048172 // regulation of short-term neuronal synaptic plasticity // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0004871 // signal transducer activity // traceable author statement /// 0004872 // receptor activity // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:35162100-35404051 (+) // 99.62 // p13.3"]
["11723314_x_at",551.68256,528.4866,605.5097,537.52234,561.65826,508.08563,0.018756866,-0.043214798,0.15306854,-0.018756866,0.044610977,-0.10000992,0.7381979,0.39784527,1.0479637,0.0675888,1.0479637,"up","PXMP2",5827.0,"","0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005777 // peroxisome // inferred from electronic annotation /// 0005778 // peroxisomal membrane // inferred from direct assay /// 0005778 // peroxisomal membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr12:133264125-133281571 (+) // 97.22 // q24.33"]
["11720695_at",26.352627,27.84376,25.973284,27.442942,26.53263,26.976105,-0.021778107,0.05762911,-0.042696476,0.036710262,-0.011957169,0.011957169,0.8870887,0.6882274,-1.0101143,-0.014518568,1.0101143,"down","C1orf54",79630.0,"","0005576 // extracellular region // inferred from electronic annotation","","chr1:150240826-150253327 (+) // 93.53 // q21.2"]
["11717330_at",349.1976,352.50412,357.58926,331.99377,341.06845,343.47467,0.011919975,0.02551651,0.04617977,-0.060967445,-0.022062302,-0.011919975,0.2968757,0.029552337,1.0421205,0.059522044,1.0421205,"up","BMS1",9790.0,"0006184 // GTP catabolic process // inferred from electronic annotation /// 0042254 // ribosome biogenesis // inferred from electronic annotation /// 0042255 // ribosome assembly // inferred from sequence or structural similarity","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from sequence or structural similarity /// 0005730 // nucleolus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation","chr10:43277951-43330385 (+) // 87.09 // q11.21"]
["11733573_at",9.912022,11.811966,10.624452,10.7095785,10.990095,9.724156,-0.10589361,0.14710426,-0.0057566166,0.005756855,0.043058872,-0.13349986,0.8846973,0.6829179,1.0281466,0.04004602,1.0281466,"up","DMRT3",58524.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007548 // sex differentiation // non-traceable author statement /// 0007548 // sex differentiation // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:976963-991732 (+) // 94.19 // p24.3"]
["11725257_at",902.65704,917.82263,926.40137,1030.35,1092.8044,1028.873,-0.113137245,-0.089099884,-0.07567787,0.077747345,0.1626482,0.07567787,0.12858607,0.00296612,-1.1471039,-0.19799608,1.1471039,"down","FZD10",11211.0,"0001944 // vasculature development // not recorded /// 0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007420 // brain development // not recorded /// 0008406 // gonad development // not recorded /// 0009790 // embryo development // not recorded /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from sequence or structural similarity /// 0032855 // positive regulation of Rac GTPase activity // inferred from mutant phenotype /// 0032956 // regulation of actin cytoskeleton organization // inferred from mutant phenotype /// 0034259 // negative regulation of Rho GTPase activity // inferred from mutant phenotype /// 0038031 // non-canonical Wnt receptor signaling pathway via JNK cascade // inferred from mutant phenotype /// 0043507 // positive regulation of JUN kinase activity // inferred from mutant phenotype /// 0060070 // canonical Wnt receptor signaling pathway // not recorded /// 0071300 // cellular response to retinoic acid // inferred from sequence or structural similarity","0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // not recorded /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0042995 // cell projection // not recorded","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0017147 // Wnt-protein binding // not recorded /// 0017147 // Wnt-protein binding // inferred from electronic annotation /// 0030165 // PDZ domain binding // not recorded /// 0042813 // Wnt-activated receptor activity // not recorded /// 0042813 // Wnt-activated receptor activity // traceable author statement","chr12:130647003-130650279 (+) // 96.07 // q24.33"]
["11756198_x_at",2655.148,2682.975,2777.4397,2261.1655,2354.5425,2229.2227,0.08667278,0.101714134,0.15163612,-0.14505291,-0.08667278,-0.16557884,0.09974472,0.0013246794,1.1857302,0.2457758,1.1857302,"up","SEC11A",23478.0,"0006112 // energy reserve metabolic process // traceable author statement /// 0006412 // translation // traceable author statement /// 0006465 // signal peptide processing // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0050796 // regulation of insulin secretion // traceable author statement","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr15:85212774-85259691 (-) // 91.26 // q25.3"]
["11723586_a_at",6.1050243,6.0161033,5.7756596,5.6915355,6.802444,5.7756596,0.05058956,0.029421806,-0.029421806,-0.05058956,0.20664573,-0.029421806,0.92702615,0.78248096,-1.0177253,-0.025348276,1.0177253,"down","GRB14",2888.0,"0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008286 // insulin receptor signaling pathway // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0046627 // negative regulation of insulin receptor signaling pathway // inferred from electronic annotation /// 0050900 // leukocyte migration // traceable author statement","0000139 // Golgi membrane // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005792 // microsome // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005070 // SH3/SH2 adaptor activity // inferred from electronic annotation /// 0005070 // SH3/SH2 adaptor activity // traceable author statement /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0051219 // phosphoprotein binding // inferred from electronic annotation","chr2:165349322-165478452 (-) // 93.21 // q24.3"]
["11760416_at",15.495714,14.112974,15.309098,15.309098,13.916736,15.495714,0.017479897,-0.11736703,0.0,0.0,-0.13756824,0.017479897,0.9755149,0.9222135,1.0046784,0.0067337197,1.0046784,"up","TMEM39B",55116.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr1:32538575-32568465 (+) // 78.59 // p35.1"]
["11741811_at",8.91272,10.055749,9.532407,9.126318,8.856716,8.798733,-0.017083406,0.15699935,0.079891205,0.017083645,-0.026177645,-0.03565359,0.5551125,0.17092486,1.0630319,0.08818491,1.0630319,"up","NME9",347736.0,"0006165 // nucleoside diphosphate phosphorylation // inferred from electronic annotation /// 0006183 // GTP biosynthetic process // inferred from electronic annotation /// 0006228 // UTP biosynthetic process // inferred from electronic annotation /// 0006241 // CTP biosynthetic process // inferred from electronic annotation /// 0045454 // cell redox homeostasis // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation","0004550 // nucleoside diphosphate kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation","chr3:137980278-138048728 (-) // 89.78 // q22.3"]
["11740647_a_at",44.25325,47.03955,40.809845,43.83099,41.890903,48.02237,0.006916046,0.09500694,-0.109950066,-0.006916046,-0.07223034,0.124839306,0.94740576,0.8396699,-1.0124893,-0.017906688,1.0124893,"down","CREBBP",1387.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0001666 // response to hypoxia // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006461 // protein complex assembly // traceable author statement /// 0007165 // signal transduction // non-traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007219 // Notch signaling pathway // traceable author statement /// 0008283 // cell proliferation // inferred from electronic annotation /// 0008589 // regulation of smoothened signaling pathway // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016573 // histone acetylation // inferred from direct assay /// 0016573 // histone acetylation // inferred from electronic annotation /// 0018076 // N-terminal peptidyl-lysine acetylation // inferred from direct assay /// 0030718 // germ-line stem cell maintenance // inferred from electronic annotation /// 0033261 // regulation of S phase // inferred from electronic annotation /// 0042592 // homeostatic process // non-traceable author statement /// 0042733 // embryonic digit morphogenesis // traceable author statement /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0000123 // histone acetyltransferase complex // inferred from electronic annotation /// 0000790 // nuclear chromatin // inferred from direct assay /// 0000940 // condensed chromosome outer kinetochore // inferred from electronic annotation /// 0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0016604 // nuclear body // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation","0000987 // core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0001078 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription // inferred from direct assay /// 0001085 // RNA polymerase II transcription factor binding // inferred from physical interaction /// 0001102 // RNA polymerase II activating transcription factor binding // traceable author statement /// 0001105 // RNA polymerase II transcription coactivator activity // traceable author statement /// 0001191 // RNA polymerase II transcription factor binding transcription factor activity involved in negative regulation of transcription // inferred from direct assay /// 0002039 // p53 binding // inferred from physical interaction /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003712 // transcription cofactor activity // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from physical interaction /// 0003713 // transcription coactivator activity // traceable author statement /// 0004402 // histone acetyltransferase activity // inferred from direct assay /// 0004402 // histone acetyltransferase activity // inferred from electronic annotation /// 0004871 // signal transducer activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016407 // acetyltransferase activity // inferred from direct assay /// 0016407 // acetyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0042975 // peroxisome proliferator activated receptor binding // inferred from electronic annotation /// 0043426 // MRF binding // inferred from direct assay /// 0046332 // SMAD binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:3775054-3930121 (-) // 96.91 // p13.3"]
["11718032_a_at",148.87917,165.07841,143.5418,161.05536,154.24605,159.00499,-0.073010445,0.07599878,-0.12568188,0.040403843,-0.02191925,0.021918774,0.7630344,0.43789324,-1.0384024,-0.054365676,1.0384024,"down","ATP6V0A1",535.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0015991 // ATP hydrolysis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport // inferred from electronic annotation /// 0033572 // transferrin transport // traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0000220 // vacuolar proton-transporting V-type ATPase, V0 domain // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0010008 // endosome membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0033177 // proton-transporting two-sector ATPase complex, proton-transporting domain // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0015078 // hydrogen ion transmembrane transporter activity // inferred from electronic annotation /// 0051117 // ATPase binding // inferred from physical interaction","chr17:40610862-40674597 (+) // 93.48 // q21.2"]
["11758626_s_at",1096.4572,1133.036,1213.3263,1073.7322,1198.3735,1017.5398,-0.023672104,0.023672104,0.12244606,-0.053887367,0.10455608,-0.13143635,0.7720808,0.4536729,1.0480721,0.06773797,1.0480721,"up","UBA2",10054.0,"0006464 // cellular protein modification process // inferred from electronic annotation /// 0016925 // protein sumoylation // inferred from direct assay /// 0016925 // protein sumoylation // inferred from electronic annotation /// 0043085 // positive regulation of catalytic activity // traceable author statement","0005634 // nucleus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008047 // enzyme activator activity // traceable author statement /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0008641 // small protein activating enzyme activity // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0019948 // SUMO activating enzyme activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from physical interaction","chr19:34960451-34960797 (+) // 98.86 // q13.11 /// chr6:142384515-142384859 (+) // 95.43 // q24.1"]
["11722791_s_at",41.88542,43.0427,42.494663,45.63545,53.01111,41.667698,-0.03007698,0.009243488,-0.009243488,0.09362984,0.30976963,-0.03759575,0.6428693,0.2650282,-1.0957816,-0.13196023,1.0957816,"down","LOC100506558 /// MATN2","100506558 /// 4147","","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // non-traceable author statement /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from sequence or structural similarity","0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr8:98881310-99048933 (+) // 86.29 // q22.1"]
["11746339_a_at",9.847751,10.724863,8.747078,9.867722,11.904216,10.527662,-0.049620867,0.0734725,-0.22061372,-0.046698093,0.22398567,0.046698093,0.6673166,0.29501352,-1.1020955,-0.14024922,1.1020955,"down","MTSS1",9788.0,"0006928 // cellular component movement // non-traceable author statement /// 0007015 // actin filament organization // inferred from electronic annotation /// 0007155 // cell adhesion // non-traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // traceable author statement /// 0030035 // microspike assembly // non-traceable author statement /// 0030036 // actin cytoskeleton organization // traceable author statement /// 0030041 // actin filament polymerization // inferred from electronic annotation /// 0046847 // filopodium assembly // inferred from electronic annotation /// 0050680 // negative regulation of epithelial cell proliferation // inferred from sequence or structural similarity /// 0061333 // renal tubule morphogenesis // inferred from sequence or structural similarity /// 0071498 // cellular response to fluid shear stress // inferred from sequence or structural similarity /// 0072102 // glomerulus morphogenesis // inferred from sequence or structural similarity /// 0072160 // nephron tubule epithelial cell differentiation // inferred from sequence or structural similarity /// 2001013 // epithelial cell proliferation involved in renal tubule morphogenesis // inferred from sequence or structural similarity","0001726 // ruffle // non-traceable author statement /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0030139 // endocytic vesicle // traceable author statement","0003779 // actin binding // inferred from electronic annotation /// 0003785 // actin monomer binding // inferred from direct assay /// 0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008093 // cytoskeletal adaptor activity // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from electronic annotation","chr8:125563030-125740379 (-) // 99.93 // q24.13"]
["11740684_at",13.09108,12.925534,13.189771,13.540241,11.294908,12.925534,0.009180069,-0.009180069,0.020015478,0.057849646,-0.20373154,-0.009180069,0.7982456,0.50060236,1.0412807,0.058359094,1.0412807,"up","HEPHL1",341208.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006825 // copper ion transport // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005507 // copper ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:93754377-93847374 (+) // 95.42 // q21"]
["11726612_a_at",18.596355,22.12636,21.194405,24.11905,18.87931,20.348316,-0.15927649,0.091469765,0.029386997,0.21587658,-0.13749027,-0.029386997,0.94476515,0.8322212,-1.0204035,-0.029139759,1.0204035,"down","SLC22A6",9356.0,"0006820 // anion transport // inferred from electronic annotation /// 0015711 // organic anion transport // inferred from direct assay /// 0015711 // organic anion transport // inferred from mutant phenotype /// 0015711 // organic anion transport // inferred from electronic annotation /// 0015742 // alpha-ketoglutarate transport // inferred from direct assay /// 0031427 // response to methotrexate // inferred from electronic annotation /// 0034220 // ion transmembrane transport // inferred from electronic annotation /// 0043252 // sodium-independent organic anion transport // inferred from direct assay /// 0043252 // sodium-independent organic anion transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0097254 // renal tubular secretion // inferred from mutant phenotype /// 0097254 // renal tubular secretion // non-traceable author statement","0005624 // membrane fraction // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0005901 // caveola // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation","0005452 // inorganic anion exchanger activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008514 // organic anion transmembrane transporter activity // inferred from direct assay /// 0008514 // organic anion transmembrane transporter activity // inferred from mutant phenotype /// 0008514 // organic anion transmembrane transporter activity // inferred from electronic annotation /// 0015075 // ion transmembrane transporter activity // inferred from electronic annotation /// 0015347 // sodium-independent organic anion transmembrane transporter activity // inferred from direct assay /// 0015347 // sodium-independent organic anion transmembrane transporter activity // inferred from electronic annotation /// 0022857 // transmembrane transporter activity // inferred from electronic annotation","chr11:62744069-62752495 (-) // 91.34 // q12.3"]
["11727040_at",55.441647,62.040695,56.20752,58.142868,58.491665,58.80295,-0.07294607,0.08929825,-0.05315399,-0.004313946,0.0043144226,0.0119719505,0.92086774,0.7672384,-1.011333,-0.016258093,1.011333,"down","MAVS",57506.0,"0001934 // positive regulation of protein phosphorylation // inferred from direct assay /// 0002218 // activation of innate immune response // inferred from mutant phenotype /// 0002230 // positive regulation of defense response to virus by host // inferred from direct assay /// 0002230 // positive regulation of defense response to virus by host // inferred from mutant phenotype /// 0007165 // signal transduction // inferred from mutant phenotype /// 0009615 // response to virus // inferred from electronic annotation /// 0032480 // negative regulation of type I interferon production // traceable author statement /// 0032727 // positive regulation of interferon-alpha production // inferred from direct assay /// 0032727 // positive regulation of interferon-alpha production // inferred from mutant phenotype /// 0032728 // positive regulation of interferon-beta production // inferred from direct assay /// 0032728 // positive regulation of interferon-beta production // inferred from mutant phenotype /// 0032757 // positive regulation of interleukin-8 production // inferred from direct assay /// 0032760 // positive regulation of tumor necrosis factor production // inferred from direct assay /// 0033160 // positive regulation of protein import into nucleus, translocation // inferred from direct assay /// 0042742 // defense response to bacterium // inferred from mutant phenotype /// 0042993 // positive regulation of transcription factor import into nucleus // inferred from direct assay /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from mutant phenotype /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045071 // negative regulation of viral genome replication // inferred from direct assay /// 0045087 // innate immune response // inferred from mutant phenotype /// 0045087 // innate immune response // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0051607 // defense response to virus // inferred from direct assay /// 0060340 // positive regulation of type I interferon-mediated signaling pathway // inferred from direct assay /// 0071360 // cellular response to exogenous dsRNA // inferred from mutant phenotype /// 0071651 // positive regulation of chemokine (C-C motif) ligand 5 production // inferred from direct assay /// 0071660 // positive regulation of IP-10 production // inferred from direct assay /// 1900063 // regulation of peroxisome organization // inferred from mutant phenotype","0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from direct assay /// 0005741 // mitochondrial outer membrane // traceable author statement /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005778 // peroxisomal membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from direct assay","0004871 // signal transducer activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from physical interaction /// 0050700 // CARD domain binding // inferred from physical interaction","chr20:3827445-3856770 (+) // 56.91 // p13"]
["11716103_a_at",2878.1646,2768.3738,3039.4778,2896.8206,2773.5244,2795.7126,0.02096653,-0.035143852,0.09963989,0.030287743,-0.03246212,-0.02096653,0.7714231,0.4529524,1.0254102,0.03620112,1.0254102,"up","PCNA",5111.0,"0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000083 // regulation of transcription involved in G1/S phase of mitotic cell cycle // traceable author statement /// 0000084 // S phase of mitotic cell cycle // traceable author statement /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0000278 // mitotic cell cycle // traceable author statement /// 0000722 // telomere maintenance via recombination // traceable author statement /// 0000723 // telomere maintenance // traceable author statement /// 0006260 // DNA replication // non-traceable author statement /// 0006260 // DNA replication // inferred from electronic annotation /// 0006271 // DNA strand elongation involved in DNA replication // traceable author statement /// 0006275 // regulation of DNA replication // inferred from electronic annotation /// 0006281 // DNA repair // non-traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006283 // transcription-coupled nucleotide-excision repair // traceable author statement /// 0006284 // base-excision repair // traceable author statement /// 0006287 // base-excision repair, gap-filling // inferred from electronic annotation /// 0006289 // nucleotide-excision repair // traceable author statement /// 0006297 // nucleotide-excision repair, DNA gap filling // traceable author statement /// 0006298 // mismatch repair // inferred from direct assay /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0019985 // translesion synthesis // inferred from direct assay /// 0032077 // positive regulation of deoxyribonuclease activity // inferred from direct assay /// 0032201 // telomere maintenance via semi-conservative replication // traceable author statement /// 0033993 // response to lipid // inferred from electronic annotation /// 0046686 // response to cadmium ion // inferred from electronic annotation /// 0048015 // phosphatidylinositol-mediated signaling // non-traceable author statement","0000307 // cyclin-dependent protein kinase holoenzyme complex // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005652 // nuclear lamina // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005657 // replication fork // inferred from electronic annotation /// 0005663 // DNA replication factor C complex // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0043596 // nuclear replication fork // inferred from direct assay /// 0043626 // PCNA complex // inferred from electronic annotation /// 0070557 // PCNA-p21 complex // inferred from direct assay","0000701 // purine-specific mismatch base pair DNA N-glycosylase activity // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0030337 // DNA polymerase processivity factor activity // inferred from electronic annotation /// 0030971 // receptor tyrosine kinase binding // inferred from physical interaction /// 0032139 // dinucleotide insertion or deletion binding // inferred from direct assay /// 0032405 // MutLalpha complex binding // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction","chr20:5095598-5107264 (-) // 90.17 // p13"]
["11746345_a_at",229.36353,235.27113,243.27617,223.428,228.41801,226.36841,0.0029797554,0.03966856,0.08793926,-0.03484583,-0.0029797554,-0.015983105,0.42473134,0.07950211,1.0435252,0.061465465,1.0435252,"up","RANBP3",8498.0,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0046907 // intracellular transport // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008536 // Ran GTPase binding // traceable author statement /// 0070412 // R-SMAD binding // inferred from physical interaction","chr19:5916153-5976587 (-) // 88.35 // p13.3"]
["11723932_a_at",22.311834,22.200186,21.655947,22.555504,23.829615,19.385372,0.0036187172,-0.0036187172,-0.03942728,0.019289017,0.0985651,-0.19922209,0.962404,0.884118,1.0097375,0.013980274,1.0097375,"up","PNMA3",29944.0,"0006915 // apoptotic process // non-traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chrX:152224765-152228822 (+) // 70.29 // q28"]
["11740091_s_at",9.599041,8.37495,8.789701,9.415617,8.10675,8.952644,0.11382651,-0.082983255,-0.013249874,0.08599186,-0.12994027,0.013249874,0.9542702,0.8601333,1.0112203,0.016097382,1.0112203,"up","TMEM163",81615.0,"","0005768 // endosome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030285 // integral to synaptic vesicle membrane // inferred from sequence or structural similarity /// 0030285 // integral to synaptic vesicle membrane // inferred from electronic annotation /// 0030672 // synaptic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from sequence or structural similarity /// 0031901 // early endosome membrane // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0008270 // zinc ion binding // inferred from sequence or structural similarity","chr2:135213330-135476570 (-) // 96.16 // q21.3"]
["11716348_s_at",254.68866,269.07047,283.2648,290.7074,278.6648,289.77478,-0.14160633,-0.06235695,0.011810303,0.04922676,-0.011810303,0.04459095,0.5071517,0.13230403,-1.0653938,-0.091386795,1.0653938,"down","KIAA0494",9813.0,"","","0005509 // calcium ion binding // inferred from electronic annotation","chr1:47140830-47184792 (-) // 98.52 // p33"]
["11763361_at",25.262993,23.502789,22.06894,18.7122,24.636387,21.49175,0.14960098,0.045407295,-0.045407295,-0.28344536,0.11336613,-0.08364153,0.70808065,0.35168222,1.0976671,0.13444057,1.0976671,"up","VSIG2",23584.0,"","0005624 // membrane fraction // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr11:124618001-124622089 (-) // 97.46 // q24.2"]
["11736360_a_at",7.882269,8.263923,7.7988744,8.059854,7.262316,8.129465,-0.016071558,0.052144527,-0.031416416,0.01607132,-0.13425255,0.028478146,0.85542005,0.6179559,1.0220411,0.03145319,1.0220411,"up","LGI2",55203.0,"","0005576 // extracellular region // inferred from electronic annotation","","chr4:24999976-25032415 (-) // 95.34 // p15.2"]
["11721041_a_at",251.04086,240.67621,272.22388,272.17834,259.154,270.95926,-0.07802057,-0.13884974,0.038850784,0.038609505,-0.032133102,0.032133102,0.6488736,0.27266237,-1.0513257,-0.072209656,1.0513257,"down","TRAPPC11",60684.0,"0006810 // transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation","0005794 // Golgi apparatus // inferred from electronic annotation","","chr4:184580441-184634745 (+) // 98.03 // q35.1"]
["11760924_at",78.76516,84.79569,84.04067,92.87403,90.3716,88.74341,-0.13925791,-0.032824516,-0.045728207,0.0984602,0.059053898,0.032824516,0.27748367,0.024308262,-1.0988921,-0.13604972,1.0988921,"down","RBM8A",9939.0,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // inferred from mutant phenotype /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // inferred from electronic annotation /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006396 // RNA processing // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // traceable author statement /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0031124 // mRNA 3'-end processing // traceable author statement /// 0051028 // mRNA transport // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016607 // nuclear speck // inferred from electronic annotation /// 0035145 // exon-exon junction complex // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // non-traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0003729 // mRNA binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr1:145507414-145508765 (+) // 99.58 // q21.1"]
["11733368_at",29.825161,30.142363,29.452967,34.428417,29.794115,32.28481,-0.007631302,0.007631302,-0.025748253,0.19943857,-0.009133816,0.10669422,0.53522825,0.1530756,-1.0774212,-0.10758234,1.0774212,"down","HIST1H4A /// HIST1H4B /// HIST1H4C /// HIST1H4D /// HIST1H4E /// HIST1H4F /// HIST1H4H /// HIST1H4I /// HIST1H4J /// HIST1H4K /// HIST1H4L /// HIST2H4A /// HIST2H4B /// HIST4H4","121504 /// 554313 /// 8294 /// 8359 /// 8360 /// 8361 /// 8362 /// 8363 /// 8364 /// 8365 /// 8366 /// 8367 /// 8368 /// 8370","0000723 // telomere maintenance // traceable author statement /// 0006325 // chromatin organization // non-traceable author statement /// 0006334 // nucleosome assembly // traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0034080 // CenH3-containing nucleosome assembly at centromere // traceable author statement /// 0045653 // negative regulation of megakaryocyte differentiation // inferred from direct assay /// 0048015 // phosphatidylinositol-mediated signaling // non-traceable author statement","0000786 // nucleosome // traceable author statement /// 0000786 // nucleosome // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr6:27107087-27108393 (+) // 86.42 // p22.1"]
["11740950_at",8.1311865,9.845989,9.226728,8.450383,8.117635,9.746605,-0.1189518,0.15711808,0.06340122,-0.06340122,-0.12135863,0.14248204,0.8893534,0.695467,1.0337938,0.047948465,1.0337938,"up","HRH2",3274.0,"0006955 // immune response // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007187 // G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004969 // histamine receptor activity // inferred from electronic annotation /// 0004969 // histamine receptor activity // traceable author statement","chr5:175108463-175111558 (+) // 72.49 // q35.2"]
["11728767_s_at",235.12576,246.51022,253.12848,247.70732,223.41211,236.11456,-0.037135124,0.03107977,0.06930256,0.03806877,-0.11086035,-0.031080246,0.708908,0.35341173,1.0393678,0.055706263,1.0393678,"up","KLHL5",51088.0,"","0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation","chr4:39063851-39123829 (+) // 98.06 // p14"]
["11740079_a_at",73.926476,74.8145,74.37448,74.9921,79.09363,79.506485,-0.01893711,-0.0017108917,-0.010220528,0.0017104149,0.07853317,0.08604431,0.41547737,0.07449069,-1.0466063,-0.06571885,1.0466063,"down","ZNF219",51222.0,"0006351 // transcription, DNA-dependent // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0004969 // histamine receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr14:21558204-21567173 (-) // 93.43 // q11.2"]
["11746466_a_at",120.13884,117.98563,130.23552,109.74688,129.24364,126.30987,-0.03613186,-0.062223434,0.08028889,-0.16665506,0.06925869,0.036132336,0.9592924,0.874824,1.0100307,0.014399211,1.0100307,"up","PRMT2",3275.0,"0006479 // protein methylation // traceable author statement /// 0006479 // protein methylation // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from direct assay /// 0007165 // signal transduction // traceable author statement /// 0016571 // histone methylation // inferred from direct assay /// 0016571 // histone methylation // inferred from sequence or structural similarity /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0032259 // methylation // inferred from electronic annotation /// 0034969 // histone arginine methylation // inferred from sequence or structural similarity /// 0034969 // histone arginine methylation // inferred from electronic annotation /// 0035246 // peptidyl-arginine N-methylation // inferred from sequence or structural similarity /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0048588 // developmental cell growth // inferred from sequence or structural similarity /// 0060765 // regulation of androgen receptor signaling pathway // inferred from direct assay /// 2000134 // negative regulation of G1/S transition of mitotic cell cycle // inferred from sequence or structural similarity","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0035189 // Rb-E2F complex // inferred from sequence or structural similarity","0003713 // transcription coactivator activity // inferred from direct assay /// 0004871 // signal transducer activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008469 // histone-arginine N-methyltransferase activity // inferred from sequence or structural similarity /// 0008469 // histone-arginine N-methyltransferase activity // inferred from electronic annotation /// 0016274 // protein-arginine N-methyltransferase activity // inferred from sequence or structural similarity /// 0016740 // transferase activity // inferred from electronic annotation /// 0030331 // estrogen receptor binding // inferred from direct assay /// 0030331 // estrogen receptor binding // inferred from physical interaction /// 0033142 // progesterone receptor binding // inferred from physical interaction /// 0042054 // histone methyltransferase activity // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0042974 // retinoic acid receptor binding // inferred from physical interaction /// 0042975 // peroxisome proliferator activated receptor binding // inferred from physical interaction /// 0046966 // thyroid hormone receptor binding // inferred from physical interaction /// 0050681 // androgen receptor binding // inferred from physical interaction","chr21:48055561-48084856 (+) // 97.17 // q22.3"]
["11718413_a_at",1578.797,1533.754,1629.7672,1603.3689,1585.9873,1575.2224,-0.0032777786,-0.045036316,0.042562485,0.019002914,0.0032777786,-0.006547928,0.93302774,0.7993769,-1.0049763,-0.00716144,1.0049763,"down","C14orf166",51637.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0072669 // tRNA-splicing ligase complex // inferred from direct assay","0000993 // RNA polymerase II core binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction","chr14:52456192-52471414 (+) // 88.31 // q22.1"]
["11729706_x_at",117.74332,117.74332,109.126915,122.082504,114.00411,116.8694,0.005373955,0.005373955,-0.10426426,0.05758524,-0.04118538,-0.0053744316,0.79552627,0.4959175,-1.0244484,-0.03484731,1.0244484,"down","ZNF561",93134.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:9717824-9785762 (-) // 50.25 // p13.2"]
["11762968_a_at",9.826582,12.493048,13.621219,12.824736,13.426126,13.510875,-0.4172244,-0.070860624,0.053869724,-0.033056974,0.033056974,0.042135,0.6922345,0.32878685,-1.1163454,-0.15878348,1.1163454,"down","MEI1",150365.0,"0007126 // meiosis // inferred from electronic annotation /// 0007141 // male meiosis I // inferred from electronic annotation /// 0007276 // gamete generation // inferred from electronic annotation /// 0007286 // spermatid development // inferred from electronic annotation","","","chr22:42177418-42190052 (+) // 84.49 // q13.2"]
["11761062_at",44.962555,40.573353,42.647877,46.767265,38.94437,45.332905,0.03812504,-0.110066414,-0.03812504,0.09490013,-0.16918421,0.04995966,0.9231309,0.77184945,-1.0200081,-0.028580591,1.0200081,"down","DISP1",84976.0,"0007224 // smoothened signaling pathway // inferred from sequence or structural similarity /// 0007224 // smoothened signaling pathway // non-traceable author statement /// 0007225 // patched ligand maturation // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007368 // determination of left/right symmetry // inferred from electronic annotation /// 0007389 // pattern specification process // inferred from electronic annotation /// 0009880 // embryonic pattern specification // inferred from electronic annotation /// 0009953 // dorsal/ventral pattern formation // inferred from electronic annotation /// 0015833 // peptide transport // inferred from sequence or structural similarity /// 0015833 // peptide transport // inferred from electronic annotation /// 0050708 // regulation of protein secretion // inferred from sequence or structural similarity /// 0060539 // diaphragm development // inferred from mutant phenotype /// 0070207 // protein homotrimerization // inferred from sequence or structural similarity","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from sequence or structural similarity","0008158 // hedgehog receptor activity // inferred from electronic annotation /// 0015197 // peptide transporter activity // inferred from sequence or structural similarity /// 0015197 // peptide transporter activity // inferred from electronic annotation","chr1:222988430-223117373 (+) // 71.24 // q41"]
["11742660_x_at",27.363626,29.734932,26.680359,29.56377,29.13516,29.171795,-0.09140825,0.02849102,-0.12788963,0.020162582,-9.0646744E-4,9.0646744E-4,0.60218847,0.21453068,-1.0499518,-0.07032309,1.0499518,"down","PRHOXNB",646625.0,"0006144 // purine base metabolic process // inferred from electronic annotation /// 0019428 // allantoin biosynthetic process // inferred from electronic annotation /// 0019628 // urate catabolic process // inferred from electronic annotation","0005777 // peroxisome // inferred from electronic annotation","0016829 // lyase activity // inferred from electronic annotation /// 0016831 // carboxy-lyase activity // inferred from sequence or structural similarity /// 0016831 // carboxy-lyase activity // inferred from electronic annotation","chr13:28552242-28562774 (-) // 100.0 // q12.2"]
["11753473_x_at",48.725998,40.919884,46.91093,41.095146,46.32895,42.318718,0.1380868,-0.11380291,0.08331919,-0.10763693,0.06530905,-0.06530905,0.78900814,0.48134005,1.0509883,0.07174663,1.0509883,"up","TMEM180",79847.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr10:104221169-104232004 (+) // 76.09 // q24.32"]
["11753703_a_at",18.269777,17.610952,16.727758,19.30906,17.603992,19.476427,0.026493073,-0.026493073,-0.100721836,0.1063118,-0.02706337,0.11876297,0.55339074,0.16949122,-1.0714598,-0.09957768,1.0714598,"down","TMEM44",93109.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr3:194309257-194336405 (-) // 100.0 // q29"]
["11762812_at",5.5428967,5.5565805,6.751407,5.683112,5.980971,6.048825,-0.07289028,-0.06933308,0.21165776,-0.03684926,0.03684926,0.053124428,0.98745555,0.95852196,1.0037755,0.0054366062,1.0037755,"up","IL31RA",133396.0,"0000165 // MAPK cascade // non-traceable author statement /// 0006916 // anti-apoptosis // non-traceable author statement /// 0006952 // defense response // non-traceable author statement /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // non-traceable author statement /// 0007259 // JAK-STAT cascade // inferred from expression pattern /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0030224 // monocyte differentiation // inferred from expression pattern /// 0030225 // macrophage differentiation // non-traceable author statement /// 0042517 // positive regulation of tyrosine phosphorylation of Stat3 protein // inferred from expression pattern /// 0042523 // positive regulation of tyrosine phosphorylation of Stat5 protein // inferred from expression pattern /// 0042592 // homeostatic process // non-traceable author statement /// 0043031 // negative regulation of macrophage activation // non-traceable author statement /// 0045893 // positive regulation of transcription, DNA-dependent // non-traceable author statement","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0003713 // transcription coactivator activity // non-traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0004896 // cytokine receptor activity // traceable author statement /// 0019901 // protein kinase binding // non-traceable author statement /// 0019955 // cytokine binding // non-traceable author statement","chr5:55155336-55198288 (+) // 80.52 // q11.2"]
["11761029_at",17.990992,16.051783,14.1379595,12.225301,15.7097025,15.424282,0.20884514,0.044303894,-0.1388557,-0.34855962,0.013226032,-0.013226271,0.7216589,0.37243706,1.1128695,0.15428443,1.1128695,"up","SLC11A1",6556.0,"0000060 // protein import into nucleus, translocation // inferred from electronic annotation /// 0001818 // negative regulation of cytokine production // inferred from sequence or structural similarity /// 0001818 // negative regulation of cytokine production // inferred from electronic annotation /// 0001819 // positive regulation of cytokine production // inferred from sequence or structural similarity /// 0001819 // positive regulation of cytokine production // inferred from electronic annotation /// 0002309 // T cell proliferation involved in immune response // inferred from sequence or structural similarity /// 0002309 // T cell proliferation involved in immune response // inferred from electronic annotation /// 0002369 // T cell cytokine production // inferred from sequence or structural similarity /// 0002369 // T cell cytokine production // inferred from electronic annotation /// 0002606 // positive regulation of dendritic cell antigen processing and presentation // inferred from sequence or structural similarity /// 0002606 // positive regulation of dendritic cell antigen processing and presentation // inferred from electronic annotation /// 0002827 // positive regulation of T-helper 1 type immune response // inferred from sequence or structural similarity /// 0002827 // positive regulation of T-helper 1 type immune response // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006826 // iron ion transport // inferred from mutant phenotype /// 0006826 // iron ion transport // inferred from electronic annotation /// 0006828 // manganese ion transport // inferred from sequence or structural similarity /// 0006828 // manganese ion transport // inferred from electronic annotation /// 0006876 // cellular cadmium ion homeostasis // inferred from genetic interaction /// 0006879 // cellular iron ion homeostasis // inferred from mutant phenotype /// 0006909 // phagocytosis // inferred from sequence or structural similarity /// 0006909 // phagocytosis // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from sequence or structural similarity /// 0006954 // inflammatory response // inferred from electronic annotation /// 0006955 // immune response // non-traceable author statement /// 0007035 // vacuolar acidification // inferred from sequence or structural similarity /// 0007035 // vacuolar acidification // inferred from electronic annotation /// 0009617 // response to bacterium // inferred from direct assay /// 0010628 // positive regulation of gene expression // inferred from sequence or structural similarity /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0015707 // nitrite transport // inferred from sequence or structural similarity /// 0015707 // nitrite transport // inferred from electronic annotation /// 0032147 // activation of protein kinase activity // inferred from sequence or structural similarity /// 0032147 // activation of protein kinase activity // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from sequence or structural similarity /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0032623 // interleukin-2 production // inferred from sequence or structural similarity /// 0032623 // interleukin-2 production // inferred from electronic annotation /// 0032632 // interleukin-3 production // inferred from sequence or structural similarity /// 0032632 // interleukin-3 production // inferred from electronic annotation /// 0032729 // positive regulation of interferon-gamma production // inferred from sequence or structural similarity /// 0032729 // positive regulation of interferon-gamma production // inferred from electronic annotation /// 0034341 // response to interferon-gamma // inferred from sequence or structural similarity /// 0034341 // response to interferon-gamma // inferred from electronic annotation /// 0042060 // wound healing // inferred from sequence or structural similarity /// 0042060 // wound healing // inferred from electronic annotation /// 0042116 // macrophage activation // inferred from sequence or structural similarity /// 0042116 // macrophage activation // inferred from electronic annotation /// 0042742 // defense response to bacterium // inferred from sequence or structural similarity /// 0042742 // defense response to bacterium // inferred from electronic annotation /// 0042832 // defense response to protozoan // inferred from sequence or structural similarity /// 0042832 // defense response to protozoan // inferred from electronic annotation /// 0043091 // L-arginine import // inferred from sequence or structural similarity /// 0043091 // L-arginine import // inferred from electronic annotation /// 0045342 // MHC class II biosynthetic process // inferred from sequence or structural similarity /// 0045342 // MHC class II biosynthetic process // inferred from electronic annotation /// 0045730 // respiratory burst // inferred from sequence or structural similarity /// 0045730 // respiratory burst // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048002 // antigen processing and presentation of peptide antigen // inferred from sequence or structural similarity /// 0048002 // antigen processing and presentation of peptide antigen // inferred from electronic annotation /// 0048255 // mRNA stabilization // inferred from sequence or structural similarity /// 0048255 // mRNA stabilization // inferred from electronic annotation /// 0050766 // positive regulation of phagocytosis // inferred from sequence or structural similarity /// 0050766 // positive regulation of phagocytosis // inferred from electronic annotation /// 0050829 // defense response to Gram-negative bacterium // inferred from sequence or structural similarity /// 0050829 // defense response to Gram-negative bacterium // inferred from electronic annotation /// 0055072 // iron ion homeostasis // inferred from sequence or structural similarity /// 0055072 // iron ion homeostasis // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0060586 // multicellular organismal iron ion homeostasis // inferred from sequence or structural similarity /// 0060586 // multicellular organismal iron ion homeostasis // inferred from electronic annotation /// 0070574 // cadmium ion transmembrane transport // inferred from genetic interaction /// 0070839 // divalent metal ion export // inferred from sequence or structural similarity /// 0070839 // divalent metal ion export // inferred from electronic annotation /// 0071421 // manganese ion transmembrane transport // inferred from sequence or structural similarity /// 0071421 // manganese ion transmembrane transport // inferred from electronic annotation","0005764 // lysosome // inferred from sequence or structural similarity /// 0005764 // lysosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from sequence or structural similarity /// 0005770 // late endosome // inferred from electronic annotation /// 0005773 // vacuole // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from mutant phenotype /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0009279 // cell outer membrane // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030670 // phagocytic vesicle membrane // inferred from direct assay /// 0030670 // phagocytic vesicle membrane // inferred from electronic annotation /// 0031902 // late endosome membrane // traceable author statement /// 0070821 // tertiary granule membrane // inferred from direct assay","0005215 // transporter activity // inferred from electronic annotation /// 0005384 // manganese ion transmembrane transporter activity // inferred from sequence or structural similarity /// 0005384 // manganese ion transmembrane transporter activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046915 // transition metal ion transmembrane transporter activity // inferred from genetic interaction /// 0051139 // metal ion:hydrogen antiporter activity // inferred from genetic interaction","chr2:219246973-219252721 (+) // 84.15 // q35"]
["11761555_at",15.9395895,14.887071,18.798689,17.120363,15.211006,16.610287,-0.029731274,-0.12828588,0.20828629,0.073367596,-0.097230196,0.029731274,0.96801597,0.90146303,1.0103115,0.014800152,1.0103115,"up","CFB",629.0,"0006508 // proteolysis // inferred from electronic annotation /// 0006956 // complement activation // traceable author statement /// 0006956 // complement activation // inferred from electronic annotation /// 0006957 // complement activation, alternative pathway // non-traceable author statement /// 0006957 // complement activation, alternative pathway // traceable author statement /// 0006957 // complement activation, alternative pathway // inferred from electronic annotation /// 0030449 // regulation of complement activation // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement","0001848 // complement binding // traceable author statement /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // traceable author statement /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr6:31913751-31914897 (+) // 100.0 // p21.33"]
["11738512_a_at",8.064592,8.151556,7.3225913,8.604129,7.9178505,8.262735,-0.0077369213,0.0077369213,-0.14698434,0.0856905,-0.034229994,0.027280807,0.6539622,0.27920473,-1.0535376,-0.07524181,1.0535376,"down","GADL1",339896.0,"0019752 // carboxylic acid metabolic process // inferred from electronic annotation","","0003824 // catalytic activity // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0016831 // carboxy-lyase activity // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation","chr3:30767691-30936153 (-) // 90.49 // p24.1"]
["11740018_a_at",208.70168,204.3759,210.64194,190.3914,192.57445,207.60985,0.018891811,-0.0113248825,0.032242775,-0.11358166,-0.09713364,0.0113248825,0.49875283,0.12537734,1.0568227,0.079733305,1.0568227,"up","INSR",3643.0,"0000187 // activation of MAPK activity // inferred from mutant phenotype /// 0001933 // negative regulation of protein phosphorylation // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from direct assay /// 0003007 // heart morphogenesis // inferred from mutant phenotype /// 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred by curator /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008286 // insulin receptor signaling pathway // inferred from direct assay /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008286 // insulin receptor signaling pathway // inferred from electronic annotation /// 0009725 // response to hormone stimulus // inferred from electronic annotation /// 0009749 // response to glucose stimulus // inferred from electronic annotation /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0010042 // response to manganese ion // inferred from electronic annotation /// 0010310 // regulation of hydrogen peroxide metabolic process // inferred from electronic annotation /// 0010560 // positive regulation of glycoprotein biosynthetic process // inferred from electronic annotation /// 0010629 // negative regulation of gene expression // inferred from electronic annotation /// 0014823 // response to activity // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0019087 // transformation of host cell by virus // inferred from mutant phenotype /// 0023014 // signal transduction by phosphorylation // inferred from direct assay /// 0030238 // male sex determination // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from mutant phenotype /// 0031017 // exocrine pancreas development // inferred from electronic annotation /// 0031667 // response to nutrient levels // inferred from electronic annotation /// 0032147 // activation of protein kinase activity // inferred from mutant phenotype /// 0032148 // activation of protein kinase B activity // inferred from direct assay /// 0032355 // response to estradiol stimulus // inferred from electronic annotation /// 0032410 // negative regulation of transporter activity // inferred from electronic annotation /// 0032868 // response to insulin stimulus // inferred from electronic annotation /// 0032869 // cellular response to insulin stimulus // inferred from direct assay /// 0033280 // response to vitamin D // inferred from electronic annotation /// 0033574 // response to testosterone stimulus // inferred from electronic annotation /// 0034612 // response to tumor necrosis factor // inferred from electronic annotation /// 0042327 // positive regulation of phosphorylation // inferred from electronic annotation /// 0042593 // glucose homeostasis // inferred from electronic annotation /// 0042593 // glucose homeostasis // inferred from mutant phenotype /// 0043410 // positive regulation of MAPK cascade // inferred from mutant phenotype /// 0045429 // positive regulation of nitric oxide biosynthetic process // inferred from mutant phenotype /// 0045444 // fat cell differentiation // inferred from electronic annotation /// 0045471 // response to ethanol // inferred from electronic annotation /// 0045725 // positive regulation of glycogen biosynthetic process // inferred from direct assay /// 0045740 // positive regulation of DNA replication // inferred from mutant phenotype /// 0045821 // positive regulation of glycolysis // inferred from mutant phenotype /// 0045840 // positive regulation of mitosis // inferred from mutant phenotype /// 0045995 // regulation of embryonic development // inferred from mutant phenotype /// 0046326 // positive regulation of glucose import // inferred from direct assay /// 0046326 // positive regulation of glucose import // non-traceable author statement /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from mutant phenotype /// 0046777 // protein autophosphorylation // inferred from electronic annotation /// 0048639 // positive regulation of developmental growth // inferred from mutant phenotype /// 0051290 // protein heterotetramerization // inferred from direct assay /// 0051290 // protein heterotetramerization // inferred from electronic annotation /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation /// 0051897 // positive regulation of protein kinase B signaling cascade // inferred from mutant phenotype /// 0060267 // positive regulation of respiratory burst // inferred from direct assay /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation","0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005792 // microsome // inferred from direct assay /// 0005792 // microsome // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred by curator /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0005899 // insulin receptor complex // inferred from mutant phenotype /// 0005901 // caveola // inferred from direct assay /// 0005901 // caveola // inferred from electronic annotation /// 0010008 // endosome membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from mutant phenotype /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004716 // receptor signaling protein tyrosine kinase activity // inferred from direct assay /// 0004872 // receptor activity // inferred from electronic annotation /// 0005009 // insulin-activated receptor activity // inferred from direct assay /// 0005009 // insulin-activated receptor activity // inferred from electronic annotation /// 0005159 // insulin-like growth factor receptor binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from direct assay /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0019903 // protein phosphatase binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0031405 // lipoic acid binding // inferred from electronic annotation /// 0031994 // insulin-like growth factor I binding // inferred from physical interaction /// 0031995 // insulin-like growth factor II binding // inferred from physical interaction /// 0032403 // protein complex binding // inferred from electronic annotation /// 0042169 // SH2 domain binding // inferred from physical interaction /// 0043423 // 3-phosphoinositide-dependent protein kinase binding // inferred from electronic annotation /// 0043548 // phosphatidylinositol 3-kinase binding // inferred from physical interaction /// 0043548 // phosphatidylinositol 3-kinase binding // inferred from electronic annotation /// 0043559 // insulin binding // inferred from direct assay /// 0043559 // insulin binding // inferred from electronic annotation /// 0043559 // insulin binding // inferred from physical interaction /// 0043560 // insulin receptor substrate binding // inferred from physical interaction /// 0043560 // insulin receptor substrate binding // inferred from electronic annotation /// 0051425 // PTB domain binding // inferred from physical interaction","chr19:7112265-7294011 (-) // 98.37 // p13.2"]
["11731275_at",12.78116,11.994229,10.448828,12.731546,11.366433,12.113566,0.08453679,-0.0071418285,-0.20614076,0.07892561,-0.08470249,0.0071418285,0.88392216,0.6809574,-1.0305184,-0.04337028,1.0305184,"down","CLEC4G",339390.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr19:7793842-7797009 (-) // 85.75 // p13.2"]
["11755755_a_at",5.9397144,6.883077,5.9274697,6.238982,7.2158012,6.6261654,-0.11434889,0.098311186,-0.11732602,-0.04343176,0.16641712,0.04343176,0.70548964,0.34685683,-1.0717192,-0.09992691,1.0717192,"down","DDX26B",203522.0,"","","","chrX:134654593-134716434 (+) // 97.64 // q26.3"]
["11736857_at",10.836018,10.697204,10.302663,9.431498,9.924269,10.438034,0.06340051,0.044800043,-0.00941658,-0.13687539,-0.06340122,0.009416342,0.47911754,0.112128735,1.0692121,0.09654804,1.0692121,"up","ODF1",4956.0,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // non-traceable author statement /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation","0001520 // outer dense fiber // non-traceable author statement /// 0001520 // outer dense fiber // inferred from electronic annotation","0005198 // structural molecule activity // non-traceable author statement /// 0019904 // protein domain specific binding // inferred from electronic annotation","chr8:103563799-103573245 (+) // 92.99 // q22.3"]
["11760880_a_at",75.21894,82.305664,78.54766,86.01501,88.41545,80.91937,-0.1176424,0.012253284,-0.05517006,0.07584953,0.115560055,-0.012253284,0.45890823,0.10049621,-1.0816536,-0.11323854,1.0816536,"down","STAT2",6773.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007259 // JAK-STAT cascade // traceable author statement /// 0009615 // response to virus // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0060337 // type I interferon-mediated signaling pathway // traceable author statement /// 0060338 // regulation of type I interferon-mediated signaling pathway // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0004871 // signal transducer activity // traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr12:56742569-56754046 (-) // 96.85 // q13.3"]
["11744290_a_at",408.93018,395.4059,395.82562,417.00677,396.09628,405.5281,0.029027939,-0.01949215,-0.017961502,0.0572443,-0.016975403,0.016975403,0.7758084,0.45859137,-1.0152887,-0.021890035,1.0152887,"down","BRMS1",25855.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0009987 // cellular process // inferred from electronic annotation /// 0019987 // negative regulation of anti-apoptosis // inferred from direct assay /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0090312 // positive regulation of protein deacetylation // inferred from direct assay /// 2000210 // positive regulation of anoikis // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0051059 // NF-kappaB binding // inferred from direct assay","chr11:66104809-66112596 (-) // 94.12 // q13.2"]
["11757347_s_at",10.854665,9.555841,9.607956,9.47025,8.580882,8.799531,0.19035053,0.006489992,0.014337063,-0.0064902306,-0.148767,-0.1124661,0.4521753,0.096083246,1.1170034,0.15963362,1.1170034,"up","RNF144A",9781.0,"0016567 // protein ubiquitination // inferred from electronic annotation","0005794 // Golgi apparatus // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:7183541-7184310 (+) // 98.72 // p25.1"]
["11717721_s_at",8.693432,8.936645,8.940155,9.866346,6.6701117,9.87127,-0.04009056,-2.8324127E-4,2.8324127E-4,0.14249921,-0.42230558,0.14321923,0.9587271,0.87303174,1.0225458,0.032165483,1.0225458,"up","ST6GAL1",6480.0,"0006464 // cellular protein modification process // non-traceable author statement /// 0006486 // protein glycosylation // inferred from electronic annotation /// 0006959 // humoral immune response // traceable author statement /// 0016266 // O-glycan processing // traceable author statement /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0000139 // Golgi membrane // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030173 // integral to Golgi membrane // inferred from electronic annotation /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation","0003835 // beta-galactoside alpha-2,6-sialyltransferase activity // inferred from electronic annotation /// 0008373 // sialyltransferase activity // inferred from direct assay /// 0008373 // sialyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation","chr3:186756529-186796341 (+) // 81.64 // q27.3"]
["11731313_a_at",40.37438,37.36632,37.29269,37.839066,37.839066,36.058857,0.10263252,-0.009068966,-0.01191473,0.009068966,0.009068966,-0.06045389,0.74187255,0.40343153,1.0290561,0.041321594,1.0290561,"up","GCFC1",94104.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation","chr21:34115556-34144169 (-) // 88.54 // q22.11"]
["11748526_a_at",9.286547,12.566539,9.258414,9.542985,9.308586,9.523753,-0.019904137,0.4164691,-0.024281025,0.01939416,-0.016484022,0.016484022,0.78105706,0.4674195,1.084951,0.117629945,1.084951,"up","HVCN1",84329.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0009268 // response to pH // inferred from sequence or structural similarity /// 0009268 // response to pH // inferred from electronic annotation /// 0010043 // response to zinc ion // inferred from direct assay /// 0010043 // response to zinc ion // inferred from sequence or structural similarity /// 0010043 // response to zinc ion // inferred from electronic annotation /// 0015992 // proton transport // inferred from sequence or structural similarity /// 0015992 // proton transport // inferred from electronic annotation /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0030171 // voltage-gated proton channel activity // inferred from direct assay /// 0030171 // voltage-gated proton channel activity // inferred from sequence or structural similarity /// 0030171 // voltage-gated proton channel activity // inferred from electronic annotation","chr12:111065645-111127227 (-) // 87.06 // q24.11"]
["11728987_a_at",102.913025,99.61291,96.4563,104.10597,104.78203,100.12176,0.019834995,-0.027186394,-0.07364416,0.036461353,0.04580021,-0.019835472,0.6167138,0.23115712,-1.0336926,-0.047807217,1.0336926,"down","RNPC3",55599.0,"0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred by curator /// 0008380 // RNA splicing // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005689 // U12-type spliceosomal complex // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation","chr1:104068577-104097861 (+) // 98.8 // p21.1"]
["11726748_at",33.019398,32.175766,28.776047,28.791792,32.64665,30.204933,0.08293438,0.04559517,-0.11551094,-0.114721775,0.0665555,-0.04559517,0.88426733,0.68161446,1.0249783,0.03559334,1.0249783,"up","TMEM57",55219.0,"0007420 // brain development // inferred from electronic annotation","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from sequence or structural similarity /// 0031965 // nuclear membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0044306 // neuron projection terminus // inferred from sequence or structural similarity /// 0044306 // neuron projection terminus // inferred from electronic annotation /// 0044456 // synapse part // inferred from sequence or structural similarity /// 0044456 // synapse part // inferred from electronic annotation","","chr1:25757348-25826695 (+) // 97.83 // p36.11"]
["11745718_s_at",1105.8668,1060.4934,1119.339,1046.0271,1016.9084,1042.7402,0.07034969,0.0099077225,0.0878191,-0.0099077225,-0.0506382,-0.014448166,0.3316891,0.039439723,1.0577682,0.081023544,1.0577682,"up","GTF2I /// GTF2IP1 /// LOC100093631","100093631 /// 2969 /// 2970","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0009790 // embryo development // inferred from electronic annotation /// 0016525 // negative regulation of angiogenesis // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0051019 // mitogen-activated protein kinase binding // inferred from electronic annotation","chr7:72569015-72621336 (+) // 93.08 // q11.23 /// chr7:74601103-74653455 (-) // 93.08 // q11.23"]
["11745955_a_at",149.36548,147.92735,146.89357,158.63806,154.38365,153.37408,-0.019104004,-0.03306198,-0.043179512,0.067788124,0.028569221,0.019104004,0.21872133,0.012950239,-1.0499123,-0.07026887,1.0499123,"down","CLSTN1",22883.0,"0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr1:9789085-9884023 (-) // 97.06 // p36.22"]
["11754183_s_at",114.026794,122.70735,124.99486,116.19053,118.25868,112.45993,-0.03984642,0.06600189,0.09264994,-0.012726784,0.012726784,-0.059808254,0.64126766,0.26259583,1.0421319,0.059537888,1.0421319,"up","HMGB3",3149.0,"0006310 // DNA recombination // inferred from sequence or structural similarity /// 0007275 // multicellular organismal development // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from sequence or structural similarity /// 0008301 // DNA binding, bending // inferred from sequence or structural similarity /// 0008301 // DNA binding, bending // traceable author statement","chrX:150151762-150159246 (+) // 87.43 // q28"]
["11762660_at",14.303735,14.754288,13.055397,13.566765,14.404716,13.889677,0.02118969,0.0659318,-0.110556126,-0.055125713,0.03133869,-0.021189451,0.9710801,0.908445,1.0049896,0.0071806065,1.0049896,"up",-0.110556126,"","","","","0016787 // hydrolase activity // inferred from electronic annotation"]
["11757361_x_at",2952.75,2937.8926,3298.4302,2965.0803,3171.377,2879.4644,-0.0030059814,-0.01028347,0.15671444,0.0030059814,0.10004425,-0.03926468,0.899722,0.7174675,1.0185709,0.026546406,1.0185709,"up","PSMA2",5683.0,"0000075 // cell cycle checkpoint // traceable author statement /// 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000084 // S phase of mitotic cell cycle // traceable author statement /// 0000209 // protein polyubiquitination // traceable author statement /// 0000216 // M/G1 transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0009615 // response to virus // inferred from expression pattern /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051603 // proteolysis involved in cellular protein catabolic process // inferred from electronic annotation","0000502 // proteasome complex // traceable author statement /// 0000502 // proteasome complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005839 // proteasome core complex // inferred from electronic annotation /// 0019773 // proteasome core complex, alpha-subunit complex // inferred from electronic annotation","0004175 // endopeptidase activity // inferred from electronic annotation /// 0004298 // threonine-type endopeptidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr7:42956486-42963006 (-) // 98.13 // p14.1"]
["11739383_a_at",718.99915,721.47296,840.1623,712.8625,736.98755,675.855,-0.0024776459,0.0024776459,0.2222004,-0.014843941,0.033172607,-0.09175396,0.6695413,0.2984547,1.0706908,0.09854184,1.0706908,"up","IDI1",3422.0,"0006694 // steroid biosynthetic process // inferred from electronic annotation /// 0006695 // cholesterol biosynthetic process // traceable author statement /// 0006695 // cholesterol biosynthetic process // inferred from electronic annotation /// 0008299 // isoprenoid biosynthetic process // inferred from direct assay /// 0008299 // isoprenoid biosynthetic process // inferred from electronic annotation /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0016126 // sterol biosynthetic process // inferred from electronic annotation /// 0035634 // response to stilbenoid // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0050992 // dimethylallyl diphosphate biosynthetic process // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005777 // peroxisome // inferred from direct assay /// 0005777 // peroxisome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000287 // magnesium ion binding // inferred from direct assay /// 0004452 // isopentenyl-diphosphate delta-isomerase activity // inferred from direct assay /// 0004452 // isopentenyl-diphosphate delta-isomerase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation /// 0030145 // manganese ion binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr10:1085968-1095061 (-) // 89.45 // p15.3"]
["11763566_at",6.4567237,6.146328,6.4997473,6.190448,6.146328,7.0958633,0.030379295,-0.04069829,0.039960623,-0.030379295,-0.04069829,0.16655517,0.9246371,0.7759314,-1.0153276,-0.021945255,1.0153276,"down","WDR48",57599.0,"0016579 // protein deubiquitination // inferred from direct assay /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr3:39119626-39138154 (+) // 98.77 // p22.2"]
["11752751_s_at",31.671036,34.60518,30.141506,35.108433,32.477337,33.16437,-0.051369667,0.07645416,-0.12278223,0.09728384,-0.015100479,0.015100479,0.73175555,0.38861042,-1.0460805,-0.064993836,1.0460805,"down","LOC284889",284889.0,"","","","chr22:24237097-24316630 (-) // 89.11 // q11.23"]
["11717157_a_at",1648.8728,1648.5306,1602.3295,1648.0414,1723.3505,1664.7478,1.4972687E-4,-1.4972687E-4,-0.04115963,-5.7792664E-4,0.06388569,0.013973236,0.5584135,0.17332792,-1.0277435,-0.03948019,1.0277435,"down","ACP1",52.0,"0006470 // protein dephosphorylation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation","0005625 // soluble fraction // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0009898 // internal side of plasma membrane // inferred from direct assay","0003993 // acid phosphatase activity // inferred from electronic annotation /// 0003993 // acid phosphatase activity // traceable author statement /// 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0004726 // non-membrane spanning protein tyrosine phosphatase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation","chr2:264868-278283 (+) // 95.55 // p25.3"]
["11755394_a_at",14.707418,15.18792,14.112722,12.123131,13.899192,14.510285,0.039508343,0.08588815,-0.020039797,-0.23927355,-0.042034864,0.020039797,0.6055837,0.21926367,1.0883996,0.122208394,1.0883996,"up","ZNF575",284346.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:44029648-44040282 (+) // 73.27 // q13.31"]
["11753251_a_at",3723.705,3689.0762,3753.1943,3680.6895,3564.1213,3738.0166,0.0067396164,-0.0067396164,0.018120766,-0.010022163,-0.056451797,0.012274742,0.68897057,0.3245638,1.0168499,0.0241067,1.0168499,"up","JTB",10899.0,"0006915 // apoptotic process // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from mutant phenotype /// 0007067 // mitosis // inferred from electronic annotation /// 0033205 // cell cycle cytokinesis // inferred from mutant phenotype /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0045860 // positive regulation of protein kinase activity // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // inferred from direct assay /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030496 // midbody // inferred from direct assay","0019901 // protein kinase binding // inferred from direct assay","chr1:153946987-153950114 (-) // 98.3 // q21.3"]
["11742201_a_at",24.520123,23.325954,23.95119,21.017128,21.172405,22.218933,0.10710335,0.03507328,0.07323456,-0.11529732,-0.10467768,-0.03507328,0.18465985,0.008626321,1.114827,0.1568199,1.114827,"up","APAF1",317.0,"0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // non-traceable author statement /// 0006952 // defense response // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0008629 // induction of apoptosis by intracellular signals // traceable author statement /// 0008635 // activation of cysteine-type endopeptidase activity involved in apoptotic process by cytochrome c // inferred from direct assay /// 0008635 // activation of cysteine-type endopeptidase activity involved in apoptotic process by cytochrome c // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0097193 // intrinsic apoptotic signaling pathway // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0043293 // apoptosome // inferred from direct assay","0000166 // nucleotide binding // traceable author statement /// 0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008656 // cysteine-type endopeptidase activator activity involved in apoptotic process // non-traceable author statement /// 0008656 // cysteine-type endopeptidase activator activity involved in apoptotic process // traceable author statement /// 0043531 // ADP binding // inferred from electronic annotation","chr12:99039077-99129210 (+) // 81.31 // q23.1"]
["11720489_a_at",10.695044,11.421337,11.366435,10.895807,13.497326,12.466702,-0.0913136,0.003475666,-0.0034759045,-0.06448245,0.2444179,0.12982416,0.61760706,0.23281392,-1.097097,-0.13369113,1.097097,"down","ACTC1",70.0,"0006200 // ATP catabolic process // inferred from direct assay /// 0006915 // apoptotic process // inferred from sequence or structural similarity /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006936 // muscle contraction // inferred from electronic annotation /// 0008217 // regulation of blood pressure // inferred from electronic annotation /// 0014829 // vascular smooth muscle contraction // inferred from electronic annotation /// 0030048 // actin filament-based movement // inferred from direct assay /// 0030049 // muscle filament sliding // traceable author statement /// 0030240 // skeletal muscle thin filament assembly // inferred from sequence or structural similarity /// 0030240 // skeletal muscle thin filament assembly // inferred from electronic annotation /// 0031032 // actomyosin structure organization // inferred from sequence or structural similarity /// 0031032 // actomyosin structure organization // inferred from electronic annotation /// 0033275 // actin-myosin filament sliding // inferred from mutant phenotype /// 0042493 // response to drug // inferred from electronic annotation /// 0045471 // response to ethanol // inferred from electronic annotation /// 0055003 // cardiac myofibril assembly // inferred from sequence or structural similarity /// 0055003 // cardiac myofibril assembly // inferred from electronic annotation /// 0055008 // cardiac muscle tissue morphogenesis // inferred from sequence or structural similarity /// 0055008 // cardiac muscle tissue morphogenesis // inferred from electronic annotation /// 0060047 // heart contraction // inferred from mutant phenotype /// 0060048 // cardiac muscle contraction // inferred from electronic annotation","0005625 // soluble fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005884 // actin filament // inferred from direct assay /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0030017 // sarcomere // inferred from direct assay /// 0030485 // smooth muscle contractile fiber // inferred from electronic annotation /// 0031674 // I band // inferred from sequence or structural similarity /// 0031674 // I band // inferred from electronic annotation /// 0042643 // actomyosin, actin part // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from direct assay /// 0017022 // myosin binding // inferred from direct assay /// 0017022 // myosin binding // inferred from physical interaction","chr15:35080293-35088340 (-) // 90.83 // q14"]
["11735621_x_at",7.102332,6.763808,7.277923,6.4464364,7.974878,7.821584,-0.017616987,-0.08807421,0.017616987,-0.157408,0.14955258,0.12155104,0.82366467,0.5486429,-1.0477225,-0.0672566,1.0477225,"down","SPO11",23626.0,"0000238 // zygotene // inferred from electronic annotation /// 0001541 // ovarian follicle development // inferred from electronic annotation /// 0006259 // DNA metabolic process // inferred from electronic annotation /// 0007126 // meiosis // inferred from electronic annotation /// 0007131 // reciprocal meiotic recombination // inferred from electronic annotation /// 0007131 // reciprocal meiotic recombination // traceable author statement /// 0007141 // male meiosis I // inferred from electronic annotation /// 0007283 // spermatogenesis // traceable author statement /// 0007286 // spermatid development // inferred from electronic annotation /// 0007292 // female gamete generation // traceable author statement /// 0034502 // protein localization to chromosome // inferred from electronic annotation","0000781 // chromosome, telomeric region // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0003824 // catalytic activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr20:55904814-55919049 (+) // 97.66 // q13.31"]
["11744044_s_at",166.97256,161.2074,165.15788,139.59598,157.54068,155.51152,0.06728983,0.016596794,0.051524162,-0.19106388,-0.016596794,-0.0352993,0.44560063,0.09251929,1.0913574,0.12612356,1.0913574,"up","PCYT2",5833.0,"0006646 // phosphatidylethanolamine biosynthetic process // inferred from electronic annotation /// 0008654 // phospholipid biosynthetic process // traceable author statement /// 0008654 // phospholipid biosynthetic process // inferred from electronic annotation /// 0009058 // biosynthetic process // inferred from electronic annotation","","0003824 // catalytic activity // inferred from electronic annotation /// 0004306 // ethanolamine-phosphate cytidylyltransferase activity // traceable author statement /// 0004306 // ethanolamine-phosphate cytidylyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016779 // nucleotidyltransferase activity // inferred from electronic annotation","chr17:79861998-79869340 (-) // 99.95 // q25.3"]
["11748953_a_at",7.0662684,6.125924,6.732396,6.828961,6.9916806,6.3808703,0.05955553,-0.14646578,-0.01027298,0.01027298,0.044246197,-0.08763981,0.9270163,0.78232217,-1.0149117,-0.021354146,1.0149117,"down","SLC2A2",6514.0,"0005975 // carbohydrate metabolic process // traceable author statement /// 0006112 // energy reserve metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0008643 // carbohydrate transport // inferred from electronic annotation /// 0008645 // hexose transport // traceable author statement /// 0009749 // response to glucose stimulus // inferred from electronic annotation /// 0015755 // fructose transport // inferred from electronic annotation /// 0015758 // glucose transport // not recorded /// 0015758 // glucose transport // traceable author statement /// 0015758 // glucose transport // inferred from electronic annotation /// 0031018 // endocrine pancreas development // traceable author statement /// 0035428 // hexose transmembrane transport // traceable author statement /// 0043434 // response to peptide hormone stimulus // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0050796 // regulation of insulin secretion // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0070837 // dehydroascorbic acid transport // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0005903 // brush border // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0031526 // brush border membrane // inferred from electronic annotation","0005158 // insulin receptor binding // inferred from electronic annotation /// 0005215 // transporter activity // inferred from electronic annotation /// 0005355 // glucose transmembrane transporter activity // not recorded /// 0005355 // glucose transmembrane transporter activity // inferred from electronic annotation /// 0005355 // glucose transmembrane transporter activity // traceable author statement /// 0015149 // hexose transmembrane transporter activity // traceable author statement /// 0022857 // transmembrane transporter activity // inferred from electronic annotation /// 0022891 // substrate-specific transmembrane transporter activity // inferred from electronic annotation /// 0033300 // dehydroascorbic acid transporter activity // inferred from electronic annotation /// 0055056 // D-glucose transmembrane transporter activity // inferred from electronic annotation","chr3:170714608-170744509 (-) // 98.25 // q26.2"]
["11717673_a_at",429.81668,432.54437,442.94482,417.98346,421.31006,404.87402,0.014419556,0.023546219,0.05782509,-0.025856018,-0.014419556,-0.07182884,0.31379813,0.034339473,1.0492064,0.069298476,1.0492064,"up","EIF2B2",8892.0,"0001541 // ovarian follicle development // inferred from mutant phenotype /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred from direct assay /// 0006413 // translational initiation // traceable author statement /// 0006413 // translational initiation // inferred from electronic annotation /// 0006446 // regulation of translational initiation // not recorded /// 0006446 // regulation of translational initiation // traceable author statement /// 0007417 // central nervous system development // inferred from mutant phenotype /// 0009408 // response to heat // inferred from sequence or structural similarity /// 0009408 // response to heat // traceable author statement /// 0009408 // response to heat // inferred from electronic annotation /// 0009749 // response to glucose stimulus // inferred from sequence or structural similarity /// 0009749 // response to glucose stimulus // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0014003 // oligodendrocyte development // inferred from mutant phenotype /// 0019509 // L-methionine salvage from methylthioadenosine // not recorded /// 0042552 // myelination // inferred from mutant phenotype /// 0043434 // response to peptide hormone stimulus // inferred from sequence or structural similarity /// 0043434 // response to peptide hormone stimulus // inferred from electronic annotation /// 0044237 // cellular metabolic process // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0051716 // cellular response to stimulus // inferred from direct assay","0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005851 // eukaryotic translation initiation factor 2B complex // inferred from direct assay","0003743 // translation initiation factor activity // inferred from direct assay /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from direct assay /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005525 // GTP binding // inferred from direct assay /// 0046523 // S-methyl-5-thioribose-1-phosphate isomerase activity // not recorded","chr14:75469611-75476292 (+) // 98.09 // q24.3"]
["11721612_a_at",293.33966,295.3109,290.85214,275.22675,279.79443,289.1468,0.01652813,0.026190758,0.0042419434,-0.07542324,-0.05167675,-0.0042419434,0.3684316,0.053095486,1.042057,0.059434246,1.042057,"up","IPO11",51194.0,"0006610 // ribosomal protein import into nucleus // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0008565 // protein transporter activity // inferred from electronic annotation","chr5:61714710-61924409 (+) // 94.17 // q12.1"]
["11726825_at",26.241774,23.985937,19.30634,23.745323,22.917841,18.581034,0.16980791,0.04013157,-0.2729826,0.025586128,-0.025586128,-0.32822657,0.86288065,0.63371414,1.0631864,0.08839457,1.0631864,"up","VPS37D",155382.0,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016032 // viral reproduction // traceable author statement /// 0016044 // cellular membrane organization // traceable author statement /// 0016197 // endosomal transport // traceable author statement /// 0046788 // egress of virus within host cell // traceable author statement","0005768 // endosome // inferred from electronic annotation /// 0010008 // endosome membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0031902 // late endosome membrane // inferred from electronic annotation","","chr7:73082157-73086440 (+) // 82.07 // q11.23"]
["11760390_at",55.59674,53.041115,63.040688,52.410378,44.422523,53.374477,0.06336975,-0.0045194626,0.24465275,-0.021778107,-0.26033926,0.0045194626,0.54360116,0.15986133,1.1436933,0.19370025,1.1436933,"up","CEP78",84131.0,"0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation","","chr9:80878965-80886791 (+) // 69.36 // q21.2"]
["11738956_x_at",6.490358,6.057614,5.8138566,5.712499,6.2873745,5.395246,0.12917542,0.029627085,-0.029627085,-0.055000544,0.08333516,-0.137434,0.72225034,0.37344766,1.0565968,0.07942489,1.0565968,"up","XAGE5",170627.0,"","","","chrX:52841577-52847322 (+) // 88.91 // p11.22"]
["11763503_a_at",27.409473,22.714571,23.950369,21.184452,20.860851,22.654694,0.27296066,0.0019040108,0.078333855,-0.09870815,-0.12091589,-0.0019040108,0.45295298,0.09658,1.1420102,0.19157554,1.1420102,"up","NF1",4763.0,"0000165 // MAPK cascade // inferred from sequence or structural similarity /// 0000165 // MAPK cascade // inferred from electronic annotation /// 0001649 // osteoblast differentiation // inferred from sequence or structural similarity /// 0001649 // osteoblast differentiation // inferred from electronic annotation /// 0001656 // metanephros development // inferred from sequence or structural similarity /// 0001656 // metanephros development // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from sequence or structural similarity /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001889 // liver development // inferred from sequence or structural similarity /// 0001889 // liver development // inferred from electronic annotation /// 0001937 // negative regulation of endothelial cell proliferation // inferred from mutant phenotype /// 0001937 // negative regulation of endothelial cell proliferation // inferred from electronic annotation /// 0001938 // positive regulation of endothelial cell proliferation // inferred from electronic annotation /// 0001952 // regulation of cell-matrix adhesion // inferred from sequence or structural similarity /// 0001952 // regulation of cell-matrix adhesion // inferred from electronic annotation /// 0006469 // negative regulation of protein kinase activity // inferred from sequence or structural similarity /// 0006469 // negative regulation of protein kinase activity // inferred from electronic annotation /// 0007154 // cell communication // inferred from sequence or structural similarity /// 0007154 // cell communication // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007265 // Ras protein signal transduction // inferred from sequence or structural similarity /// 0007265 // Ras protein signal transduction // inferred from electronic annotation /// 0007406 // negative regulation of neuroblast proliferation // inferred from sequence or structural similarity /// 0007406 // negative regulation of neuroblast proliferation // inferred from electronic annotation /// 0007420 // brain development // inferred from sequence or structural similarity /// 0007420 // brain development // inferred from electronic annotation /// 0007422 // peripheral nervous system development // inferred from sequence or structural similarity /// 0007422 // peripheral nervous system development // inferred from electronic annotation /// 0007507 // heart development // inferred from sequence or structural similarity /// 0007507 // heart development // inferred from electronic annotation /// 0007519 // skeletal muscle tissue development // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0008542 // visual learning // inferred from sequence or structural similarity /// 0008542 // visual learning // inferred from electronic annotation /// 0014044 // Schwann cell development // inferred from sequence or structural similarity /// 0014044 // Schwann cell development // inferred from electronic annotation /// 0014065 // phosphatidylinositol 3-kinase cascade // inferred from sequence or structural similarity /// 0014065 // phosphatidylinositol 3-kinase cascade // inferred from electronic annotation /// 0016525 // negative regulation of angiogenesis // inferred from electronic annotation /// 0021510 // spinal cord development // inferred from sequence or structural similarity /// 0021510 // spinal cord development // inferred from electronic annotation /// 0021897 // forebrain astrocyte development // inferred from sequence or structural similarity /// 0021897 // forebrain astrocyte development // inferred from electronic annotation /// 0021915 // neural tube development // inferred from electronic annotation /// 0021987 // cerebral cortex development // inferred from sequence or structural similarity /// 0021987 // cerebral cortex development // inferred from electronic annotation /// 0022011 // myelination in peripheral nervous system // inferred from sequence or structural similarity /// 0022011 // myelination in peripheral nervous system // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from sequence or structural similarity /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030198 // extracellular matrix organization // inferred from sequence or structural similarity /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0030199 // collagen fibril organization // inferred from sequence or structural similarity /// 0030199 // collagen fibril organization // inferred from electronic annotation /// 0030325 // adrenal gland development // inferred from sequence or structural similarity /// 0030325 // adrenal gland development // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // inferred from mutant phenotype /// 0030336 // negative regulation of cell migration // inferred from electronic annotation /// 0032228 // regulation of synaptic transmission, GABAergic // inferred from electronic annotation /// 0032318 // regulation of Ras GTPase activity // inferred from mutant phenotype /// 0032320 // positive regulation of Ras GTPase activity // inferred from direct assay /// 0032320 // positive regulation of Ras GTPase activity // inferred from mutant phenotype /// 0032320 // positive regulation of Ras GTPase activity // inferred from sequence or structural similarity /// 0032320 // positive regulation of Ras GTPase activity // inferred from electronic annotation /// 0035021 // negative regulation of Rac protein signal transduction // inferred from electronic annotation /// 0042060 // wound healing // inferred from sequence or structural similarity /// 0042060 // wound healing // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042992 // negative regulation of transcription factor import into nucleus // inferred from sequence or structural similarity /// 0042992 // negative regulation of transcription factor import into nucleus // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from sequence or structural similarity /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043407 // negative regulation of MAP kinase activity // inferred from sequence or structural similarity /// 0043407 // negative regulation of MAP kinase activity // inferred from electronic annotation /// 0043409 // negative regulation of MAPK cascade // inferred from mutant phenotype /// 0043409 // negative regulation of MAPK cascade // inferred from sequence or structural similarity /// 0043409 // negative regulation of MAPK cascade // inferred from electronic annotation /// 0043473 // pigmentation // inferred from sequence or structural similarity /// 0043473 // pigmentation // inferred from electronic annotation /// 0043525 // positive regulation of neuron apoptotic process // inferred from sequence or structural similarity /// 0043525 // positive regulation of neuron apoptotic process // inferred from electronic annotation /// 0043535 // regulation of blood vessel endothelial cell migration // inferred from mutant phenotype /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0045124 // regulation of bone resorption // inferred from sequence or structural similarity /// 0045124 // regulation of bone resorption // inferred from electronic annotation /// 0045685 // regulation of glial cell differentiation // inferred from sequence or structural similarity /// 0045685 // regulation of glial cell differentiation // inferred from electronic annotation /// 0045762 // positive regulation of adenylate cyclase activity // inferred from sequence or structural similarity /// 0045762 // positive regulation of adenylate cyclase activity // inferred from electronic annotation /// 0045765 // regulation of angiogenesis // inferred from mutant phenotype /// 0045765 // regulation of angiogenesis // inferred from electronic annotation /// 0046580 // negative regulation of Ras protein signal transduction // not recorded /// 0046580 // negative regulation of Ras protein signal transduction // inferred from electronic annotation /// 0046929 // negative regulation of neurotransmitter secretion // inferred from electronic annotation /// 0048147 // negative regulation of fibroblast proliferation // inferred from electronic annotation /// 0048169 // regulation of long-term neuronal synaptic plasticity // inferred from electronic annotation /// 0048485 // sympathetic nervous system development // inferred from sequence or structural similarity /// 0048485 // sympathetic nervous system development // inferred from electronic annotation /// 0048593 // camera-type eye morphogenesis // inferred from sequence or structural similarity /// 0048593 // camera-type eye morphogenesis // inferred from electronic annotation /// 0048712 // negative regulation of astrocyte differentiation // inferred from electronic annotation /// 0048715 // negative regulation of oligodendrocyte differentiation // inferred from sequence or structural similarity /// 0048715 // negative regulation of oligodendrocyte differentiation // inferred from electronic annotation /// 0048745 // smooth muscle tissue development // inferred from sequence or structural similarity /// 0048745 // smooth muscle tissue development // inferred from electronic annotation /// 0048844 // artery morphogenesis // inferred from sequence or structural similarity /// 0048844 // artery morphogenesis // inferred from electronic annotation /// 0048853 // forebrain morphogenesis // inferred from sequence or structural similarity /// 0048853 // forebrain morphogenesis // inferred from electronic annotation /// 0050890 // cognition // inferred from mutant phenotype /// 0051056 // regulation of small GTPase mediated signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005737 // cytoplasm // not recorded /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0030424 // axon // inferred from direct assay /// 0030425 // dendrite // inferred from direct assay /// 0031235 // intrinsic to internal side of plasma membrane // not recorded","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005099 // Ras GTPase activator activity // inferred from direct assay /// 0005099 // Ras GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr17:29527553-29701451 (+) // 99.91 // q11.2"]
["11751149_x_at",17.143766,15.789745,18.654062,14.955896,17.002209,15.1879225,0.065329075,-0.053367138,0.18713474,-0.13164091,0.053367138,-0.10943055,0.6136285,0.22810298,1.0934852,0.12893374,1.0934852,"up","STRN4",29888.0,"","0000159 // protein phosphatase type 2A complex // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // non-traceable author statement /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0032403 // protein complex binding // inferred from direct assay /// 0051721 // protein phosphatase 2A binding // inferred from direct assay /// 0070016 // armadillo repeat domain binding // inferred from physical interaction","chr19:47228589-47250120 (-) // 92.07 // q13.32"]
["11718841_s_at",244.20753,261.5225,279.56815,263.64465,274.81097,255.4995,-0.10465765,-0.005829811,0.09043503,0.005829811,0.06567478,-0.039444447,0.93306935,0.7995638,-1.0121133,-0.017370846,1.0121133,"down","IL8",3576.0,"0001525 // angiogenesis // traceable author statement /// 0002237 // response to molecule of bacterial origin // inferred from direct assay /// 0006928 // cellular component movement // traceable author statement /// 0006935 // chemotaxis // inferred from electronic annotation /// 0006954 // inflammatory response // traceable author statement /// 0006954 // inflammatory response // inferred from electronic annotation /// 0006955 // immune response // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0007050 // cell cycle arrest // inferred from direct assay /// 0007165 // signal transduction // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0019722 // calcium-mediated signaling // traceable author statement /// 0030155 // regulation of cell adhesion // inferred from direct assay /// 0030593 // neutrophil chemotaxis // inferred from genetic interaction /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0031623 // receptor internalization // inferred from direct assay /// 0035556 // intracellular signal transduction // inferred from direct assay /// 0042119 // neutrophil activation // traceable author statement /// 0044344 // cellular response to fibroblast growth factor stimulus // inferred from expression pattern /// 0045091 // regulation of retroviral genome replication // inferred from direct assay /// 0045744 // negative regulation of G-protein coupled receptor protein signaling pathway // inferred from direct assay /// 0048566 // embryonic digestive tract development // inferred from expression pattern /// 0050930 // induction of positive chemotaxis // inferred from genetic interaction /// 0071222 // cellular response to lipopolysaccharide // inferred from direct assay /// 0071347 // cellular response to interleukin-1 // inferred from expression pattern /// 0071356 // cellular response to tumor necrosis factor // inferred from expression pattern /// 0090023 // positive regulation of neutrophil chemotaxis // traceable author statement","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0005622 // intracellular // inferred from direct assay","0005125 // cytokine activity // inferred from electronic annotation /// 0005153 // interleukin-8 receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008009 // chemokine activity // inferred from electronic annotation /// 0008009 // chemokine activity // traceable author statement","chr4:74606222-74609433 (+) // 67.34 // q13.3"]
["11764110_s_at",5.982964,5.4142156,5.6102324,6.417799,6.648714,6.531648,-0.05060911,-0.19471717,-0.14340901,0.05060911,0.10160589,0.075977564,0.1973713,0.010001425,-1.1531999,-0.20564263,1.1531999,"down","ID4",3400.0,"0000082 // G1/S transition of mitotic cell cycle // inferred from electronic annotation /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0007405 // neuroblast proliferation // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0021766 // hippocampus development // inferred from electronic annotation /// 0021895 // cerebral cortex neuron differentiation // inferred from electronic annotation /// 0022010 // central nervous system myelination // inferred from electronic annotation /// 0034613 // cellular protein localization // inferred from electronic annotation /// 0045444 // fat cell differentiation // inferred from electronic annotation /// 0045599 // negative regulation of fat cell differentiation // inferred from electronic annotation /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0045669 // positive regulation of osteoblast differentiation // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0048712 // negative regulation of astrocyte differentiation // inferred from electronic annotation /// 0048715 // negative regulation of oligodendrocyte differentiation // inferred from electronic annotation","0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0001085 // RNA polymerase II transcription factor binding // inferred from electronic annotation /// 0003714 // transcription corepressor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr6:19841684-19842425 (+) // 95.87 // p22.3"]
["11731530_a_at",21.878462,24.343287,23.334892,18.076555,16.653908,17.085577,0.13769579,0.29170847,0.23067331,-0.13769579,-0.25595474,-0.21903658,0.10799549,0.0017162963,1.3418792,0.42425483,1.3418792,"up","DOK1",1796.0,"0007165 // signal transduction // traceable author statement /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // traceable author statement /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0007243 // intracellular protein kinase cascade // inferred from electronic annotation /// 0007265 // Ras protein signal transduction // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005057 // receptor signaling protein activity // inferred from electronic annotation /// 0005158 // insulin receptor binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation","chr2:74781228-74784673 (+) // 93.1 // p13.1"]
["11717894_s_at",1077.1716,1041.3673,1237.0482,1163.3617,1114.2776,1106.3582,-0.043715477,-0.092484474,0.15593815,0.06733608,0.005145073,-0.005145073,0.9506922,0.8511743,-1.0110581,-0.015865892,1.0110581,"down","PTP4A1",7803.0,"0006470 // protein dephosphorylation // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // non-traceable author statement /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009898 // internal side of plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // non-traceable author statement /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0008138 // protein tyrosine/serine/threonine phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation","chr6:64281916-64293491 (+) // 94.31 // q12"]
["11716021_x_at",842.3606,821.5862,884.9561,786.03,815.2069,794.60297,0.041648865,0.005622864,0.11281681,-0.05820465,-0.005622864,-0.042554855,0.39584187,0.064823665,1.0635027,0.088823654,1.0635027,"up","RAD23A",5886.0,"0006281 // DNA repair // inferred from electronic annotation /// 0006289 // nucleotide-excision repair // inferred from direct assay /// 0006289 // nucleotide-excision repair // inferred from electronic annotation /// 0006289 // nucleotide-excision repair // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0032434 // regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045070 // positive regulation of viral genome replication // inferred from mutant phenotype","0000502 // proteasome complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003684 // damaged DNA binding // inferred from electronic annotation /// 0003697 // single-stranded DNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0031593 // polyubiquitin binding // inferred from direct assay","chr19:13056627-13064456 (+) // 93.81 // p13.2"]
["11738045_a_at",19.22402,17.55034,16.881622,17.486902,19.172382,17.158857,0.13402319,0.002612114,-0.05343342,-0.002612114,0.13014269,-0.029933453,0.98564345,0.95164853,-1.0033315,-0.0047984105,1.0033315,"down","LRAT",9227.0,"0001523 // retinoid metabolic process // traceable author statement /// 0006776 // vitamin A metabolic process // inferred from electronic annotation /// 0007601 // visual perception // inferred from electronic annotation /// 0008202 // steroid metabolic process // traceable author statement /// 0009790 // embryo development // inferred from electronic annotation /// 0042572 // retinol metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0050896 // response to stimulus // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005771 // multivesicular body // inferred from sequence or structural similarity /// 0005771 // multivesicular body // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005791 // rough endoplasmic reticulum // inferred from sequence or structural similarity /// 0005791 // rough endoplasmic reticulum // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0001972 // retinoic acid binding // inferred from electronic annotation /// 0008374 // O-acyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // traceable author statement /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0019841 // retinol binding // inferred from electronic annotation /// 0047173 // phosphatidylcholine-retinol O-acyltransferase activity // inferred from electronic annotation","chr4:155665122-155674270 (+) // 85.12 // q32.1"]
["11733881_at",337.44733,344.3547,344.867,344.16034,358.57086,329.67584,-0.02882576,4.0721893E-4,0.0025520325,-4.0721893E-4,0.05877018,-0.06243992,0.9510156,0.8516862,-1.0050472,-0.007263259,1.0050472,"down","TTF1",7270.0,"0006338 // chromatin remodeling // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006353 // transcription termination, DNA-dependent // non-traceable author statement /// 0006353 // transcription termination, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006360 // transcription from RNA polymerase I promoter // traceable author statement /// 0006361 // transcription initiation from RNA polymerase I promoter // inferred from electronic annotation /// 0006363 // termination of RNA polymerase I transcription // traceable author statement /// 0006363 // termination of RNA polymerase I transcription // inferred from electronic annotation /// 0008156 // negative regulation of DNA replication // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation","chr9:135250938-135278216 (-) // 87.84 // q34.13"]
["11735066_at",6.473109,6.4721975,6.5601993,6.1935167,7.050821,6.34081,1.01566315E-4,-1.01566315E-4,0.019382477,-0.063598394,0.12343407,-0.029690027,0.9862097,0.9535586,-1.0024899,-0.0035877367,1.0024899,"down","ITGB3",3690.0,"0001934 // positive regulation of protein phosphorylation // traceable author statement /// 0001938 // positive regulation of endothelial cell proliferation // inferred from mutant phenotype /// 0002576 // platelet degranulation // traceable author statement /// 0007155 // cell adhesion // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007160 // cell-matrix adhesion // inferred from electronic annotation /// 0007229 // integrin-mediated signaling pathway // traceable author statement /// 0007229 // integrin-mediated signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0010595 // positive regulation of endothelial cell migration // inferred from mutant phenotype /// 0010745 // negative regulation of macrophage derived foam cell differentiation // inferred from mutant phenotype /// 0010888 // negative regulation of lipid storage // inferred from mutant phenotype /// 0014909 // smooth muscle cell migration // inferred from mutant phenotype /// 0030168 // platelet activation // inferred from mutant phenotype /// 0030168 // platelet activation // traceable author statement /// 0030949 // positive regulation of vascular endothelial growth factor receptor signaling pathway // traceable author statement /// 0032147 // activation of protein kinase activity // inferred from mutant phenotype /// 0032369 // negative regulation of lipid transport // inferred from mutant phenotype /// 0035295 // tube development // traceable author statement /// 0042060 // wound healing // inferred by curator /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045124 // regulation of bone resorption // traceable author statement /// 0045715 // negative regulation of low-density lipoprotein particle receptor biosynthetic process // inferred from mutant phenotype /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from mutant phenotype /// 0050748 // negative regulation of lipoprotein metabolic process // inferred from mutant phenotype /// 0050900 // leukocyte migration // traceable author statement /// 0060055 // angiogenesis involved in wound healing // traceable author statement /// 0070527 // platelet aggregation // inferred from mutant phenotype","0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0008305 // integrin complex // inferred from direct assay /// 0008305 // integrin complex // inferred from electronic annotation /// 0008305 // integrin complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031092 // platelet alpha granule membrane // traceable author statement /// 0042470 // melanosome // inferred from direct assay /// 0071062 // alphav-beta3 integrin-vitronectin complex // traceable author statement","0003756 // protein disulfide isomerase activity // inferred from direct assay /// 0004872 // receptor activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from electronic annotation /// 0005161 // platelet-derived growth factor receptor binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0043184 // vascular endothelial growth factor receptor 2 binding // inferred from physical interaction /// 0043184 // vascular endothelial growth factor receptor 2 binding // traceable author statement /// 0050839 // cell adhesion molecule binding // inferred from physical interaction","chr17:45331192-45390501 (+) // 90.25 // q21.32"]
["11717889_s_at",907.48224,953.2075,861.665,957.8254,936.8743,934.2694,-0.043977737,0.026943207,-0.118720055,0.03391552,0.002008438,-0.002008438,0.6422963,0.26398548,-1.0399806,-0.056556683,1.0399806,"down","GNAI2",2771.0,"0000186 // activation of MAPKK activity // inferred from electronic annotation /// 0001973 // adenosine receptor signaling pathway // not recorded /// 0001973 // adenosine receptor signaling pathway // inferred from electronic annotation /// 0006184 // GTP catabolic process // not recorded /// 0006184 // GTP catabolic process // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from sequence or structural similarity /// 0007193 // adenylate cyclase-inhibiting G-protein coupled receptor signaling pathway // traceable author statement /// 0007193 // adenylate cyclase-inhibiting G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007194 // negative regulation of adenylate cyclase activity // traceable author statement /// 0007213 // G-protein coupled acetylcholine receptor signaling pathway // inferred from electronic annotation /// 0007214 // gamma-aminobutyric acid signaling pathway // not recorded /// 0007214 // gamma-aminobutyric acid signaling pathway // inferred from electronic annotation /// 0007243 // intracellular protein kinase cascade // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007584 // response to nutrient // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008283 // cell proliferation // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0043434 // response to peptide hormone stimulus // inferred from sequence or structural similarity /// 0050805 // negative regulation of synaptic transmission // inferred from electronic annotation /// 0051301 // cell division // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation /// 0051927 // negative regulation of calcium ion transport via voltage-gated calcium channel activity // not recorded /// 0051927 // negative regulation of calcium ion transport via voltage-gated calcium channel activity // inferred from electronic annotation","0005624 // membrane fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005834 // heterotrimeric G-protein complex // not recorded /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030496 // midbody // inferred from direct assay /// 0031234 // extrinsic to internal side of plasma membrane // not recorded /// 0045121 // membrane raft // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0001664 // G-protein coupled receptor binding // not recorded /// 0003924 // GTPase activity // not recorded /// 0003924 // GTPase activity // traceable author statement /// 0004871 // signal transducer activity // not recorded /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from sequence or structural similarity /// 0019001 // guanyl nucleotide binding // inferred from electronic annotation /// 0031683 // G-protein beta/gamma-subunit complex binding // not recorded /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:50266496-50296787 (+) // 53.5 // p21.31"]
["11760392_s_at",72.90254,72.373955,72.874016,73.41888,64.59504,72.6922,0.0023665428,-0.008131981,0.0018019676,0.012548447,-0.17217922,-0.0018024445,0.7575135,0.4269803,1.0370532,0.052489944,1.0370532,"up","SUGP2",10147.0,"0006396 // RNA processing // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation","chr19:19101701-19141839 (-) // 98.44 // p13.11"]
["11735307_at",10.620795,10.351074,9.538094,9.47697,10.802063,9.47697,0.09611535,0.05900383,-0.05900359,-0.06827879,0.12053037,-0.06827879,0.87417877,0.6584202,1.026249,0.03738089,1.026249,"up","C9orf139",401563.0,"","","","chr9:139921915-139931569 (+) // 92.95 // q34.3"]
["11722704_a_at",16.109108,18.584393,15.001416,14.132495,16.183512,16.805182,-0.0033240318,0.20289087,-0.10610199,-0.19218445,0.0033240318,0.057705402,0.8296225,0.5613787,1.0532686,0.07487333,1.0532686,"up","DZIP1",22873.0,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0007281 // germ cell development // non-traceable author statement /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0042384 // cilium assembly // inferred from mutant phenotype","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005814 // centriole // inferred from direct assay /// 0036064 // cilium basal body // inferred from direct assay /// 0043234 // protein complex // non-traceable author statement","0003676 // nucleic acid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr13:96230455-96296957 (-) // 85.27 // q32.1"]
["11747644_s_at",9.882838,9.401822,9.882838,10.204559,9.972706,10.590852,-0.0065295696,-0.078514814,-0.0065295696,0.03968692,0.0065295696,0.09329152,0.44451657,0.09161498,-1.0548422,-0.07702724,1.0548422,"down","LIMS3 /// LIMS3-LOC440895 /// LIMS3L","100271835 /// 100288695 /// 96626","","0005737 // cytoplasm // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:110656239-110738377 (+) // 94.46 // q13 /// chr2:109271464-109297226 (+) // 91.74 // q12.3 /// chr2:111204661-111230421 (-) // 92.48 // q13"]
["11758854_at",1002.0406,989.0409,1060.2074,989.43976,999.0999,962.03876,0.011248589,-0.007590294,0.09265423,-0.0070085526,0.0070085526,-0.047525406,0.6237538,0.24073255,1.033792,0.04794597,1.033792,"up","ATL3",25923.0,"0006184 // GTP catabolic process // non-traceable author statement /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006888 // ER to Golgi vesicle-mediated transport // inferred from mutant phenotype /// 0007029 // endoplasmic reticulum organization // inferred from mutant phenotype /// 0007030 // Golgi organization // inferred from mutant phenotype /// 0051260 // protein homooligomerization // inferred from direct assay","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // non-traceable author statement /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from direct assay","chr11:63391553-63439385 (-) // 84.44 // q12.3"]
["11724162_a_at",182.66818,172.08427,184.37799,186.52156,182.65895,207.7198,-0.006720543,-0.09283018,0.006720543,0.023396015,-0.006793499,0.1786933,0.6032499,0.21576184,-1.0688372,-0.09604208,1.0688372,"down","GXYLT1",283464.0,"0016266 // O-glycan processing // inferred from direct assay","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0016763 // transferase activity, transferring pentosyl groups // inferred from electronic annotation /// 0035252 // UDP-xylosyltransferase activity // inferred from direct assay","chr12:42475646-42538673 (-) // 87.68 // q12"]
["11750409_a_at",8.584754,7.457391,6.756126,7.75444,8.746692,8.078188,0.11724973,-0.0858562,-0.22833085,-0.029504776,0.1442101,0.029504538,0.7199104,0.3692684,-1.0820115,-0.11371578,1.0820115,"down","TMTC2",160335.0,"","0005783 // endoplasmic reticulum // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr12:83081259-83526365 (+) // 99.96 // q21.31"]
["11752164_x_at",139.68071,134.18384,136.7306,112.36827,108.67756,125.87398,0.104037285,0.0461154,0.07324076,-0.2098608,-0.25804138,-0.0461154,0.26124182,0.02068462,1.1857531,0.24580364,1.1857531,"up","KDM2B",84678.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from sequence or structural similarity /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0016577 // histone demethylation // traceable author statement /// 0021555 // midbrain-hindbrain boundary morphogenesis // inferred from sequence or structural similarity /// 0021555 // midbrain-hindbrain boundary morphogenesis // inferred from electronic annotation /// 0021592 // fourth ventricle development // inferred from sequence or structural similarity /// 0021592 // fourth ventricle development // inferred from electronic annotation /// 0021670 // lateral ventricle development // inferred from sequence or structural similarity /// 0021670 // lateral ventricle development // inferred from electronic annotation /// 0021678 // third ventricle development // inferred from sequence or structural similarity /// 0021678 // third ventricle development // inferred from electronic annotation /// 0021993 // initiation of neural tube closure // inferred from sequence or structural similarity /// 0021993 // initiation of neural tube closure // inferred from electronic annotation /// 0030900 // forebrain development // inferred from sequence or structural similarity /// 0030900 // forebrain development // inferred from electronic annotation /// 0030901 // midbrain development // inferred from sequence or structural similarity /// 0030901 // midbrain development // inferred from electronic annotation /// 0030902 // hindbrain development // inferred from sequence or structural similarity /// 0030902 // hindbrain development // inferred from electronic annotation /// 0035518 // histone H2A monoubiquitination // inferred from direct assay /// 0043524 // negative regulation of neuron apoptotic process // inferred from sequence or structural similarity /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0048596 // embryonic camera-type eye morphogenesis // inferred from sequence or structural similarity /// 0048596 // embryonic camera-type eye morphogenesis // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0070544 // histone H3-K36 demethylation // inferred from electronic annotation /// 2000178 // negative regulation of neural precursor cell proliferation // inferred from sequence or structural similarity /// 2000178 // negative regulation of neural precursor cell proliferation // inferred from electronic annotation","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0031519 // PcG protein complex // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // non-traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008270 // zinc ion binding // non-traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016702 // oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen // inferred from electronic annotation /// 0019843 // rRNA binding // inferred from electronic annotation /// 0032452 // histone demethylase activity // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051864 // histone demethylase activity (H3-K36 specific) // inferred from electronic annotation","chr12:121867673-122018859 (-) // 99.02 // q24.31"]
["11741773_x_at",882.9291,871.6844,882.6986,963.01733,929.8444,921.0536,-0.030493736,-0.04898548,-0.030870438,0.09477043,0.044198036,0.030493736,0.20038584,0.010377936,-1.0667858,-0.09327054,1.0667858,"down","TCEA2",6919.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006354 // transcription elongation, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006414 // translational elongation // inferred from electronic annotation /// 0032784 // regulation of transcription elongation, DNA-dependent // inferred from electronic annotation /// 0032784 // regulation of transcription elongation, DNA-dependent // non-traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0008023 // transcription elongation factor complex // non-traceable author statement","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003746 // translation elongation factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr20:62688438-62703700 (+) // 93.92 // q13.33"]
["11747222_a_at",95.15336,100.218765,83.8049,103.95077,101.214226,112.24077,-0.08195591,-0.007129669,-0.26517582,0.045618057,0.007130146,0.15631437,0.46110854,0.10179955,-1.1390054,-0.18777461,1.1390054,"down","CAPN1",823.0,"0006508 // proteolysis // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0016540 // protein autoprocessing // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005626 // insoluble fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0004198 // calcium-dependent cysteine-type endopeptidase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008092 // cytoskeletal protein binding // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr11:64949488-64979472 (+) // 95.23 // q13.1"]
["11762280_a_at",129.08875,137.72295,136.2615,139.43034,139.03246,138.25931,-0.09620905,-0.0028042793,-0.018194675,0.01497221,0.010848522,0.0028038025,0.55470234,0.17052647,-1.0342686,-0.048610926,1.0342686,"down","EIF4A1",1973.0,"0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0000289 // nuclear-transcribed mRNA poly(A) tail shortening // traceable author statement /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // traceable author statement /// 0006413 // translational initiation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0031100 // organ regeneration // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation","0005829 // cytosol // traceable author statement /// 0016281 // eukaryotic translation initiation factor 4F complex // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0000339 // RNA cap binding // traceable author statement /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003729 // mRNA binding // traceable author statement /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0004386 // helicase activity // traceable author statement /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0008135 // translation factor activity, nucleic acid binding // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation","chr17:7476143-7479039 (+) // 98.46 // p13.1"]
["11743444_s_at",1759.3741,1793.4185,1877.493,1825.4167,1842.9475,1793.6118,-0.04048443,-0.012834549,0.053260803,0.0126791,0.026468277,-0.0126791,0.9273962,0.78341794,-1.0061477,-0.008842166,1.0061477,"down","RHOB",388.0,"0001525 // angiogenesis // inferred from electronic annotation /// 0006184 // GTP catabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006927 // transformed cell apoptotic process // inferred from sequence or structural similarity /// 0006927 // transformed cell apoptotic process // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from sequence or structural similarity /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007266 // Rho protein signal transduction // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008333 // endosome to lysosome transport // inferred from direct assay /// 0015031 // protein transport // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0033205 // cell cycle cytokinesis // inferred from mutant phenotype /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0045766 // positive regulation of angiogenesis // inferred from sequence or structural similarity /// 0045766 // positive regulation of angiogenesis // inferred from electronic annotation /// 0045786 // negative regulation of cell cycle // inferred from sequence or structural similarity /// 0045786 // negative regulation of cell cycle // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement /// 0070301 // cellular response to hydrogen peroxide // inferred from direct assay /// 0071479 // cellular response to ionizing radiation // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0031902 // late endosome membrane // inferred from electronic annotation /// 0032154 // cleavage furrow // inferred from direct assay /// 0032154 // cleavage furrow // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // traceable author statement /// 0005525 // GTP binding // inferred from electronic annotation /// 0019003 // GDP binding // inferred from electronic annotation","chr2:20646831-20649206 (+) // 95.54 // p24.1"]
["11740072_s_at",210.54074,197.67537,238.79932,214.35005,225.8741,202.32892,-0.012935162,-0.10390091,0.16876459,0.012934685,0.088484764,-0.07033157,0.98319453,0.9436464,1.0048268,0.0069468254,1.0048268,"up","MIER1",57708.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007165 // signal transduction // inferred from mutant phenotype /// 0031937 // positive regulation of chromatin silencing // inferred from direct assay /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0017053 // transcriptional repressor complex // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction","chr1:67390577-67454302 (+) // 96.16 // p31.3"]
["11750491_a_at",60.323395,57.23876,46.699272,50.123,53.046566,53.36405,0.18115377,0.105428696,-0.18816376,-0.08609104,-0.004304409,0.004304409,0.85881436,0.6247671,1.0435525,0.061503205,1.0435525,"up","SEC14L1",6397.0,"0006810 // transport // inferred from electronic annotation","0005794 // Golgi apparatus // traceable author statement /// 0016020 // membrane // traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0005488 // binding // traceable author statement","chr17:75202746-75210724 (+) // 100.0 // q25.2"]
["11737062_a_at",20.942343,27.181265,21.36182,26.492811,22.0569,22.429464,-0.086889744,0.28929996,-0.058278084,0.25228834,-0.012082577,0.012082577,0.93988204,0.8188653,-1.0253042,-0.036052007,1.0253042,"down","MTMR3",8897.0,"0006470 // protein dephosphorylation // inferred from direct assay /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from direct assay /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation /// 0046856 // phosphatidylinositol dephosphorylation // inferred from direct assay","0005624 // membrane fraction // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0004438 // phosphatidylinositol-3-phosphatase activity // inferred from direct assay /// 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004722 // protein serine/threonine phosphatase activity // inferred from direct assay /// 0004725 // protein tyrosine phosphatase activity // inferred from direct assay /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr22:30279157-30426855 (+) // 99.68 // q12.2"]
["11759705_x_at",15.410088,17.047022,15.187924,17.246418,14.464614,16.617887,-0.05443096,0.0912137,-0.07538128,0.10799074,-0.14577818,0.05443096,0.95130205,0.8531978,-1.0128454,-0.018413974,1.0128454,"down","IGLC1",3537.0,"0006955 // immune response // non-traceable author statement /// 0006956 // complement activation // traceable author statement /// 0006958 // complement activation, classical pathway // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0050776 // regulation of immune response // traceable author statement","0005576 // extracellular region // traceable author statement /// 0005886 // plasma membrane // traceable author statement","0003823 // antigen binding // non-traceable author statement /// 0003823 // antigen binding // inferred from electronic annotation","chr22:23154240-23243614 (+) // 84.89 // q11.22"]
["11726831_at",46.71088,45.75452,51.007786,47.23945,42.551174,35.761837,0.014922142,-0.014922142,0.14188099,0.031155586,-0.11963749,-0.3704157,0.57476664,0.18884274,1.148905,0.20025955,1.148905,"up","ANTXR1",84168.0,"0022414 // reproductive process // inferred from electronic annotation /// 0031532 // actin cytoskeleton reorganization // inferred from direct assay /// 0034446 // substrate adhesion-dependent cell spreading // inferred from direct assay","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031258 // lamellipodium membrane // inferred from direct assay /// 0031258 // lamellipodium membrane // inferred from electronic annotation /// 0031527 // filopodium membrane // inferred from direct assay /// 0031527 // filopodium membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005518 // collagen binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051015 // actin filament binding // inferred from direct assay","chr2:69240275-69373544 (+) // 90.14 // p13.3"]
["11720385_a_at",26.092375,31.944733,27.91903,25.43442,27.606632,25.695164,-0.040693283,0.25125647,0.056927204,-0.077539444,0.040693283,-0.062824726,0.63959646,0.26078495,1.0885345,0.1223871,1.0885345,"up","MRC2",9902.0,"0006897 // endocytosis // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr17:60704761-60770953 (+) // 94.36 // q23.2"]
["11730855_a_at",670.488,664.993,705.6741,642.5893,598.42163,610.3848,0.036593437,0.024721146,0.11038399,-0.024721146,-0.12745571,-0.09889889,0.28237224,0.025730487,1.1026117,0.14092477,1.1026117,"up","HMGN3",9324.0,"0016568 // chromatin modification // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0061178 // regulation of insulin secretion involved in cellular response to glucose stimulus // inferred from electronic annotation","0000785 // chromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0031492 // nucleosomal DNA binding // inferred from electronic annotation /// 0046966 // thyroid hormone receptor binding // non-traceable author statement","chr6:79910961-79944557 (-) // 97.71 // q14.1"]
["11751407_a_at",16.906849,18.136765,15.850654,17.623325,14.66818,18.712206,-0.029939175,0.071370125,-0.123004675,0.029939175,-0.23485708,0.11643267,0.99553704,0.98556054,1.0015981,0.002303759,1.0015981,"up","CHRND",1144.0,"0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006936 // muscle contraction // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0048630 // skeletal muscle tissue growth // inferred from mutant phenotype /// 0050881 // musculoskeletal movement // inferred from mutant phenotype /// 0050905 // neuromuscular process // non-traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005892 // acetylcholine-gated channel complex // inferred from electronic annotation /// 0005892 // acetylcholine-gated channel complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // non-traceable author statement /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004889 // acetylcholine-activated cation-selective channel activity // inferred from electronic annotation /// 0004889 // acetylcholine-activated cation-selective channel activity // traceable author statement /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005230 // extracellular ligand-gated ion channel activity // inferred from electronic annotation /// 0042166 // acetylcholine binding // inferred from electronic annotation","chr2:233390897-233400076 (+) // 99.85 // q37.1"]
["11737356_a_at",13.13157,10.726269,10.122314,11.148483,14.163134,10.965465,0.24813223,-0.043759108,-0.12736821,0.011940241,0.35723305,-0.011940241,0.84830666,0.60128856,-1.0668885,-0.093409345,1.0668885,"down","C3orf55",152078.0,"","","","chr3:157261158-157319028 (+) // 81.68 // q25.32"]
["11758815_a_at",15.847231,14.3193,14.506396,15.534318,15.101752,13.334711,0.09852815,-0.04774165,-0.029013395,0.06975603,0.029013395,-0.15051627,0.92588,0.7793938,1.0171318,0.024506643,1.0171318,"up","KDM5B",10765.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0034720 // histone H3-K4 demethylation // inferred from direct assay /// 0034720 // histone H3-K4 demethylation // inferred from electronic annotation /// 0034721 // histone H3-K4 demethylation, trimethyl-H3-K4-specific // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003714 // transcription corepressor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016702 // oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen // inferred from electronic annotation /// 0016706 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors // inferred from electronic annotation /// 0032453 // histone demethylase activity (H3-K4 specific) // inferred from electronic annotation /// 0034647 // histone demethylase activity (H3-trimethyl-K4 specific) // inferred from direct assay /// 0034648 // histone demethylase activity (H3-dimethyl-K4 specific) // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:202696344-202778598 (-) // 90.96 // q32.1"]
["11761239_at",7.7422814,8.379344,7.127895,8.267718,8.82344,7.6901603,-0.04736519,0.06671333,-0.16664791,0.04736519,0.14121723,-0.057110548,0.7085508,0.35263294,-1.0665295,-0.09292389,1.0665295,"down","ZDHHC20",253832.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr13:21928088-22033507 (-) // 72.91 // q12.11"]
["11763728_a_at",325.26578,348.20758,297.63522,334.27277,318.719,326.7346,-0.003250122,0.09507847,-0.13132381,0.036156654,-0.03258419,0.003250122,0.9448716,0.83268386,-1.0107592,-0.015439384,1.0107592,"down","FKBP9",11328.0,"0000413 // protein peptidyl-prolyl isomerization // not recorded /// 0000413 // protein peptidyl-prolyl isomerization // inferred from electronic annotation /// 0006457 // protein folding // inferred from sequence or structural similarity /// 0006457 // protein folding // inferred from electronic annotation /// 0018208 // peptidyl-proline modification // not recorded","0005783 // endoplasmic reticulum // not recorded /// 0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0016020 // membrane // not recorded","0003755 // peptidyl-prolyl cis-trans isomerase activity // not recorded /// 0003755 // peptidyl-prolyl cis-trans isomerase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from sequence or structural similarity /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005528 // FK506 binding // not recorded /// 0016853 // isomerase activity // inferred from electronic annotation","chr7:32997049-33028710 (+) // 88.85 // p14.3"]
["11728722_s_at",899.433,915.8741,1002.7662,908.317,992.0555,893.9276,-0.02015686,0.005976677,0.13674068,-0.005976677,0.121248245,-0.029014587,0.9565153,0.86617935,1.0084232,0.012101227,1.0084232,"up","VPS29",51699.0,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0004647 // phosphoserine phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016788 // hydrolase activity, acting on ester bonds // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:110928947-110939932 (-) // 50.61 // q24.11"]
["11753720_x_at",79.006775,79.324585,82.911476,78.54655,77.87404,73.289215,0.004214287,0.010005951,0.0738101,-0.004214287,-0.016619682,-0.10416126,0.51803064,0.13930562,1.0504508,0.07100859,1.0504508,"up","GMFB",2764.0,"0006468 // protein phosphorylation // traceable author statement /// 0006469 // negative regulation of protein kinase activity // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007399 // nervous system development // traceable author statement /// 0043085 // positive regulation of catalytic activity // traceable author statement","0005622 // intracellular // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0004860 // protein kinase inhibitor activity // traceable author statement /// 0004871 // signal transducer activity // traceable author statement /// 0008047 // enzyme activator activity // traceable author statement /// 0008083 // growth factor activity // inferred from electronic annotation","chr14:54944808-54950486 (-) // 99.53 // q22.2"]
["11756765_x_at",219.87961,226.4163,231.13249,226.25172,208.874,217.61275,-0.020606995,0.02165699,0.05139923,0.020607471,-0.09468794,-0.035557747,0.62436116,0.24117446,1.0381602,0.054029092,1.0381602,"up","BCL2L13",23786.0,"0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // non-traceable author statement /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // non-traceable author statement /// 0042981 // regulation of apoptotic process // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005739 // mitochondrion // non-traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation","0008656 // cysteine-type endopeptidase activator activity involved in apoptotic process // non-traceable author statement","chr22:18138424-18185210 (+) // 69.02 // q11.21"]
["11735160_at",38.09064,44.32845,41.053074,39.49301,44.09371,38.042503,-0.08010721,0.13868904,0.027946472,-0.027946472,0.13102913,-0.08193159,0.9404147,0.82031107,1.01522,0.02179246,1.01522,"up","KCNAB3",9196.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006813 // potassium ion transport // traceable author statement /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005249 // voltage-gated potassium channel activity // inferred from electronic annotation /// 0015459 // potassium channel regulator activity // traceable author statement","chr17:7825176-7832753 (-) // 98.05 // p13.1"]
["11740643_a_at",6.722055,7.0374393,7.5351562,5.952229,6.4806666,6.2110415,0.026380062,0.09252834,0.19111538,-0.1490922,-0.026380062,-0.087687016,0.30922052,0.03262918,1.141603,0.19106102,1.141603,"up","CYP4F8",11283.0,"0006690 // icosanoid metabolic process // traceable author statement /// 0006693 // prostaglandin metabolic process // traceable author statement /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004497 // monooxygenase activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from electronic annotation /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016705 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen // inferred from electronic annotation /// 0018685 // alkane 1-monooxygenase activity // traceable author statement /// 0020037 // heme binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070330 // aromatase activity // inferred from electronic annotation","chr19:15726031-15740448 (+) // 97.1 // p13.12"]
["11720665_s_at",2076.414,2101.7126,2087.352,2072.8633,2088.4783,2125.276,-0.007968903,0.009502411,-3.8909912E-4,-0.010437965,3.8909912E-4,0.025587082,0.8940957,0.7053436,-1.0033312,-0.0047978964,1.0033312,"down","SYNCRIP",10492.0,"0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0006396 // RNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0070934 // CRD-mediated mRNA stabilization // inferred from mutant phenotype","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // traceable author statement /// 0070937 // CRD-mediated mRNA stability complex // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay /// 0071204 // histone pre-mRNA 3'end processing complex // inferred from sequence or structural similarity /// 0071204 // histone pre-mRNA 3'end processing complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008143 // poly(A) RNA binding // inferred from electronic annotation","chr6:86323502-86353046 (-) // 92.96 // q14.3"]
["11761376_a_at",6.168297,5.9060493,5.9456253,6.6751304,6.2826715,6.571836,-0.013252974,-0.07593179,-0.06629658,0.100670815,0.013252974,0.07817125,0.2747853,0.023848662,-1.08362,-0.11585886,1.08362,"down","ZNF90",7643.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006412 // translation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005840 // ribosome // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0008270 // zinc ion binding // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:20188805-20237885 (+) // 68.52 // p12"]
["11739418_at",21.05214,25.009304,23.20637,21.700678,18.756052,25.486576,-0.09216356,0.1563344,0.04839039,-0.04839039,-0.25877428,0.1836071,0.85614246,0.6198648,1.0560706,0.078706235,1.0560706,"up","IRGQ",126298.0,"","","","chr19:44088520-44100289 (-) // 54.34 // q13.31"]
["11737326_a_at",422.2795,435.835,415.64038,462.93866,436.1745,452.04065,-0.04614544,-5.617142E-4,-0.06900787,0.08647728,5.617142E-4,0.052108765,0.37801513,0.057007793,-1.0606542,-0.08495433,1.0606542,"down","SLC6A9",6536.0,"0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006836 // neurotransmitter transport // inferred from electronic annotation /// 0006865 // amino acid transport // inferred from electronic annotation /// 0015816 // glycine transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement","0005624 // membrane fraction // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005283 // sodium:amino acid symporter activity // inferred from electronic annotation /// 0005328 // neurotransmitter:sodium symporter activity // inferred from electronic annotation /// 0015187 // glycine transmembrane transporter activity // inferred from electronic annotation /// 0015293 // symporter activity // inferred from electronic annotation /// 0015375 // glycine:sodium symporter activity // traceable author statement","chr1:44462154-44482997 (-) // 99.88 // p34.1"]
["11733979_at",8.382542,9.140877,8.7350645,8.111563,7.6168523,9.622172,-0.0297153,0.095229864,0.0297153,-0.07712293,-0.16790819,0.16925979,0.857607,0.6224358,1.0403006,0.057000473,1.0403006,"up","CD28",940.0,"0002863 // positive regulation of inflammatory response to antigenic stimulus // inferred from electronic annotation /// 0006955 // immune response // inferred from electronic annotation /// 0006959 // humoral immune response // traceable author statement /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0008624 // induction of apoptosis by extracellular signals // inferred from electronic annotation /// 0016032 // viral reproduction // traceable author statement /// 0031295 // T cell costimulation // traceable author statement /// 0031295 // T cell costimulation // inferred from electronic annotation /// 0042089 // cytokine biosynthetic process // traceable author statement /// 0042102 // positive regulation of T cell proliferation // inferred from direct assay /// 0042102 // positive regulation of T cell proliferation // inferred from sequence or structural similarity /// 0042102 // positive regulation of T cell proliferation // traceable author statement /// 0042102 // positive regulation of T cell proliferation // inferred from electronic annotation /// 0042110 // T cell activation // inferred from electronic annotation /// 0045060 // negative thymic T cell selection // inferred from electronic annotation /// 0045066 // regulatory T cell differentiation // inferred from direct assay /// 0045070 // positive regulation of viral genome replication // non-traceable author statement /// 0045086 // positive regulation of interleukin-2 biosynthetic process // inferred from direct assay /// 0045086 // positive regulation of interleukin-2 biosynthetic process // inferred from sequence or structural similarity /// 0045086 // positive regulation of interleukin-2 biosynthetic process // inferred from electronic annotation /// 0045727 // positive regulation of translation // non-traceable author statement /// 0045768 // positive regulation of anti-apoptosis // traceable author statement /// 0045840 // positive regulation of mitosis // inferred from direct assay /// 0045840 // positive regulation of mitosis // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046641 // positive regulation of alpha-beta T cell proliferation // inferred from electronic annotation /// 0048304 // positive regulation of isotype switching to IgG isotypes // inferred from electronic annotation /// 0050690 // regulation of defense response to virus by virus // traceable author statement","0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0009897 // external side of plasma membrane // inferred from direct assay /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0045121 // membrane raft // inferred from electronic annotation","0002020 // protease binding // inferred from physical interaction /// 0005070 // SH3/SH2 adaptor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0015026 // coreceptor activity // traceable author statement /// 0042802 // identical protein binding // non-traceable author statement /// 0042803 // protein homodimerization activity // inferred from electronic annotation","chr2:204571197-204602556 (+) // 85.71 // q33.2"]
["11731370_a_at",8.590774,9.188076,9.134349,9.032316,8.721698,10.647763,-0.08041072,0.016563654,0.008102894,-0.008103132,-0.058589935,0.22927952,0.78938615,0.48205486,-1.0517391,-0.07277686,1.0517391,"down","NODAL",4838.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001702 // gastrulation with mouth forming second // inferred from electronic annotation /// 0001707 // mesoderm formation // inferred from electronic annotation /// 0001829 // trophectodermal cell differentiation // inferred from electronic annotation /// 0001831 // trophectodermal cellular morphogenesis // inferred from electronic annotation /// 0001842 // neural fold formation // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0001892 // embryonic placenta development // inferred from electronic annotation /// 0001944 // vasculature development // inferred from electronic annotation /// 0001947 // heart looping // inferred from electronic annotation /// 0002085 // inhibition of neuroepithelial cell differentiation // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007368 // determination of left/right symmetry // inferred from electronic annotation /// 0007369 // gastrulation // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0007492 // endoderm development // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0009880 // embryonic pattern specification // inferred from electronic annotation /// 0009948 // anterior/posterior axis specification // inferred from electronic annotation /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0009966 // regulation of signal transduction // inferred from electronic annotation /// 0010085 // polarity specification of proximal/distal axis // inferred from electronic annotation /// 0010575 // positive regulation vascular endothelial growth factor production // inferred from mutant phenotype /// 0016477 // cell migration // inferred from electronic annotation /// 0019827 // stem cell maintenance // inferred from electronic annotation /// 0022409 // positive regulation of cell-cell adhesion // inferred from mutant phenotype /// 0030324 // lung development // inferred from electronic annotation /// 0032924 // activin receptor signaling pathway // inferred from electronic annotation /// 0032927 // positive regulation of activin receptor signaling pathway // inferred from genetic interaction /// 0033505 // floor plate morphogenesis // inferred from electronic annotation /// 0035050 // embryonic heart tube development // inferred from electronic annotation /// 0040007 // growth // inferred from electronic annotation /// 0042074 // cell migration involved in gastrulation // inferred from electronic annotation /// 0043280 // positive regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0045165 // cell fate commitment // inferred from electronic annotation /// 0045596 // negative regulation of cell differentiation // inferred from electronic annotation /// 0045766 // positive regulation of angiogenesis // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048327 // axial mesodermal cell fate specification // inferred from electronic annotation /// 0048382 // mesendoderm development // inferred from electronic annotation /// 0048546 // digestive tract morphogenesis // inferred from electronic annotation /// 0048646 // anatomical structure formation involved in morphogenesis // inferred from electronic annotation /// 0048701 // embryonic cranial skeleton morphogenesis // inferred from electronic annotation /// 0048729 // tissue morphogenesis // inferred from electronic annotation /// 0048859 // formation of anatomical boundary // inferred from electronic annotation /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from mutant phenotype /// 0055123 // digestive system development // inferred from electronic annotation /// 0060136 // embryonic process involved in female pregnancy // inferred from electronic annotation /// 0060395 // SMAD protein signal transduction // inferred from electronic annotation /// 0060460 // left lung morphogenesis // inferred from electronic annotation /// 0060802 // epiblast cell-extraembryonic ectoderm cell signaling involved in anterior/posterior axis specification // inferred from electronic annotation /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from mutant phenotype /// 0090009 // primitive streak formation // inferred from electronic annotation /// 0090010 // transforming growth factor beta receptor signaling pathway involved in primitive streak formation // inferred from electronic annotation /// 1900224 // positive regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry // inferred from sequence or structural similarity","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation","0005125 // cytokine activity // inferred from electronic annotation /// 0008083 // growth factor activity // inferred from electronic annotation","chr10:72191450-72201466 (-) // 84.95 // q22.1"]
["11717798_at",31.13136,28.185032,32.58168,31.421268,33.396027,33.695786,-0.03953266,-0.18297195,0.026159763,-0.026159763,0.061775208,0.07466698,0.6022852,0.2147995,-1.0734159,-0.10220913,1.0734159,"down","ZER1",10444.0,"0015991 // ATP hydrolysis coupled proton transport // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from mutant phenotype /// 0051438 // regulation of ubiquitin-protein ligase activity // inferred from mutant phenotype","0000221 // vacuolar proton-transporting V-type ATPase, V1 domain // inferred from electronic annotation /// 0031462 // Cul2-RING ubiquitin ligase complex // inferred from direct assay","0004842 // ubiquitin-protein ligase activity // inferred from mutant phenotype /// 0046961 // proton-transporting ATPase activity, rotational mechanism // inferred from electronic annotation","chr9:131492064-131534210 (-) // 95.8 // q34.11"]
["11759680_a_at",33.81723,37.473057,38.813965,34.884544,34.39856,38.284397,-0.09646225,0.05163288,0.102355,-0.05163288,-0.07187271,0.08253574,0.88794404,0.6911846,1.0230182,0.03283187,1.0230182,"up","ATG3",64422.0,"0000045 // autophagic vacuole assembly // inferred from sequence or structural similarity /// 0000045 // autophagic vacuole assembly // inferred from electronic annotation /// 0006464 // cellular protein modification process // inferred from direct assay /// 0006612 // protein targeting to membrane // inferred from sequence or structural similarity /// 0006810 // transport // inferred from electronic annotation /// 0006914 // autophagy // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from direct assay /// 0043653 // mitochondrial fragmentation involved in apoptotic process // inferred from sequence or structural similarity /// 0043653 // mitochondrial fragmentation involved in apoptotic process // inferred from electronic annotation","0000153 // cytoplasmic ubiquitin ligase complex // inferred from physical interaction /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0016874 // ligase activity // inferred from electronic annotation /// 0019776 // Atg8 ligase activity // inferred from sequence or structural similarity /// 0019776 // Atg8 ligase activity // inferred from electronic annotation /// 0019777 // Atg12 ligase activity // inferred from sequence or structural similarity /// 0019777 // Atg12 ligase activity // inferred from electronic annotation /// 0019787 // small conjugating protein ligase activity // inferred from direct assay /// 0019899 // enzyme binding // inferred from physical interaction","chr3:112251356-112280759 (-) // 92.24 // q13.2"]
["11723802_at",20.151218,19.789896,18.344591,17.133888,18.013376,20.109846,0.080807686,0.054704666,-0.054704666,-0.15320683,-0.08099079,0.07784271,0.72494423,0.3783396,1.0563253,0.07905421,1.0563253,"up","F10",2159.0,"0006508 // proteolysis // traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0007596 // blood coagulation // inferred by curator /// 0007596 // blood coagulation // traceable author statement /// 0007596 // blood coagulation // inferred from electronic annotation /// 0007597 // blood coagulation, intrinsic pathway // traceable author statement /// 0007598 // blood coagulation, extrinsic pathway // traceable author statement /// 0007599 // hemostasis // inferred from electronic annotation /// 0017187 // peptidyl-glutamic acid carboxylation // traceable author statement /// 0030335 // positive regulation of cell migration // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0051897 // positive regulation of protein kinase B signaling cascade // inferred from direct assay","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0005792 // microsome // inferred from electronic annotation /// 0005796 // Golgi lumen // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0031233 // intrinsic to external side of plasma membrane // inferred by curator","0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from direct assay /// 0004252 // serine-type endopeptidase activity // traceable author statement /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from direct assay /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr13:113777123-113803843 (+) // 93.39 // q34"]
["11743245_at",8.332533,8.506508,9.415639,8.823688,7.5172358,7.582721,-0.01490593,0.01490593,0.16139793,0.06772065,-0.16345882,-0.15094519,0.60380524,0.21637595,1.0988748,0.13602702,1.0988748,"up","OR52E6",390078.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr11:5862157-5863127 (-) // 100.0 // p15.4"]
["11745294_a_at",57.03349,55.169464,55.02149,56.3628,59.374058,60.100002,0.008533001,-0.039405823,-0.04328108,-0.008533001,0.06655645,0.084088326,0.4476486,0.09380159,-1.0512375,-0.07208859,1.0512375,"down","OGFOD2",79676.0,"0055114 // oxidation-reduction process // inferred from electronic annotation","","0005506 // iron ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016702 // oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen // inferred from electronic annotation /// 0016705 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen // inferred from electronic annotation /// 0016706 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors // inferred from electronic annotation /// 0031418 // L-ascorbic acid binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:123459249-123464309 (+) // 91.16 // q24.31"]
["11719654_a_at",14.283222,12.999143,13.876345,12.036341,15.364545,13.125072,0.081845045,-0.054059982,0.04015112,-0.1650796,0.18712854,-0.040151358,0.93613476,0.80828696,1.0200781,0.02867956,1.0200781,"up","SV2A",9900.0,"0006810 // transport // inferred from electronic annotation /// 0006836 // neurotransmitter transport // inferred from electronic annotation /// 0006874 // cellular calcium ion homeostasis // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005911 // cell-cell junction // inferred from electronic annotation /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030672 // synaptic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031594 // neuromuscular junction // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0048786 // presynaptic active zone // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005215 // transporter activity // inferred from electronic annotation /// 0022857 // transmembrane transporter activity // inferred from electronic annotation","chr1:149874869-149889531 (-) // 85.65 // q21.2"]
["11749549_a_at",162.94722,167.18135,156.52744,172.72487,172.90971,181.77296,-0.0605402,-0.02353096,-0.11852932,0.02353096,0.025074005,0.09719229,0.31379813,0.03434475,-1.0838256,-0.11613261,1.0838256,"down","PIGX",54965.0,"0006501 // C-terminal protein lipidation // traceable author statement /// 0006506 // GPI anchor biosynthetic process // inferred from electronic annotation /// 0016254 // preassembly of GPI anchor in ER membrane // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr3:196439470-196461160 (+) // 89.66 // q29"]
["11734337_at",7.84539,7.174645,8.355298,8.119138,7.3544736,8.409995,-0.024740696,-0.15367842,0.066105366,0.024740696,-0.11796379,0.07551932,0.9059287,0.73282486,-1.0221002,-0.03153665,1.0221002,"down","THSD7B",80731.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr2:137748461-138435287 (+) // 99.97 // q22.1"]
["11742392_s_at",24.931847,24.05636,22.488888,19.451992,24.544287,28.160786,0.037086964,-0.0144844055,-0.11169052,-0.32098484,0.0144844055,0.21278477,0.9977226,0.9928482,1.0010698,0.0015425474,1.0010698,"up","OR1L4 /// OR1L6","254973 /// 392390","0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr9:125486268-125487204 (+) // 100.0 // q33.2"]
["11761017_x_at",218.56662,220.97586,211.83115,216.1352,228.2845,245.23105,-0.007907867,0.007908344,-0.0530653,-0.024046421,0.05485201,0.15816069,0.6080293,0.22195317,-1.0575142,-0.080677025,1.0575142,"down","SDHAP2",727956.0,"0022900 // electron transport chain // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","","0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016627 // oxidoreductase activity, acting on the CH-CH group of donors // inferred from electronic annotation /// 0050660 // flavin adenine dinucleotide binding // inferred from electronic annotation","chr3:195384927-195399552 (+) // 94.03 // q29 /// chr3:195702573-195717169 (-) // 92.6 // q29"]
["11745022_a_at",151.7584,116.20735,111.02481,140.90768,123.56307,140.60771,0.2033143,-0.18176031,-0.24758053,0.096288204,-0.093214035,0.09321356,0.8106556,0.52368766,-1.0773134,-0.107438035,1.0773134,"down","TRMT2B",79979.0,"0008033 // tRNA processing // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation","","0008168 // methyltransferase activity // inferred from electronic annotation /// 0009021 // tRNA (uracil-5-)-methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chrX:100264338-100307101 (-) // 90.57 // q22.1"]
["11763577_a_at",30.74576,34.013535,27.00407,31.98788,33.907787,34.703773,-0.09918356,0.046537876,-0.28639412,-0.042045593,0.042045593,0.07552147,0.6305213,0.24891844,-1.1005213,-0.1381871,1.1005213,"down","SLC25A23",79085.0,"0006810 // transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr19:6130374-6452399 (-) // 32.0 // p13.3"]
["11758742_x_at",286.95532,312.0986,303.79715,298.5975,308.1729,310.27872,-0.09259796,0.028577805,-0.010315895,-0.035222054,0.010315895,0.020140648,0.84229565,0.58942604,-1.0162041,-0.023190217,1.0162041,"down","RNF40",9810.0,"0006511 // ubiquitin-dependent protein catabolic process // inferred from sequence or structural similarity /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0010390 // histone monoubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0033523 // histone H2B ubiquitination // inferred from direct assay","0000151 // ubiquitin ligase complex // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0019717 // synaptosome // inferred from sequence or structural similarity /// 0019717 // synaptosome // inferred from electronic annotation /// 0033503 // HULC complex // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation","0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0017075 // syntaxin-1 binding // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0032403 // protein complex binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:30773628-30786539 (+) // 77.44 // p11.2"]
["11746461_a_at",247.6704,268.65796,247.7015,244.83478,233.19626,238.33897,0.008306503,0.12565565,0.008487225,-0.008306503,-0.078570366,-0.047100067,0.46602702,0.104637735,1.0659517,0.092142075,1.0659517,"up","TACC3",10460.0,"0000226 // microtubule cytoskeleton organization // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from electronic annotation /// 0021987 // cerebral cortex development // inferred from electronic annotation /// 0022008 // neurogenesis // inferred from electronic annotation /// 0022027 // interkinetic nuclear migration // inferred from electronic annotation /// 0030097 // hemopoiesis // inferred from electronic annotation /// 0030953 // astral microtubule organization // inferred from electronic annotation /// 0032886 // regulation of microtubule-based process // inferred from electronic annotation /// 0042994 // cytoplasmic sequestering of transcription factor // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005813 // centrosome // inferred from electronic annotation","0019904 // protein domain specific binding // inferred from electronic annotation","chr4:1723218-1740443 (+) // 94.08 // p16.3"]
["11759530_s_at",12.746165,14.546833,16.425177,14.518873,14.294415,14.634639,-0.18925405,0.0013878345,0.17659163,-0.0013878345,-0.0238657,0.010069847,0.99703735,0.9907903,1.0009036,0.0013030398,1.0009036,"up","NUDT22",84304.0,"","","0016787 // hydrolase activity // inferred from electronic annotation","chr11:63997013-64001752 (+) // 98.79 // q13.1"]
["11752719_a_at",56.367977,56.172474,53.781273,58.572105,54.70615,54.364002,0.024092674,0.019079685,-0.043679237,0.07943058,-0.019080162,-0.028131485,0.9340652,0.8022428,-1.0075899,-0.010908618,1.0075899,"down","DHX34",9704.0,"","0005622 // intracellular // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr19:47852574-47876131 (+) // 100.0 // q13.32"]
["11762060_x_at",7602.271,7673.709,7117.846,8016.102,7849.5415,8086.135,-0.029835701,-0.01634121,-0.12482548,0.046634674,0.016342163,0.05918312,0.3731757,0.055076163,-1.0700816,-0.0977208,1.0700816,"down","CD55",1604.0,"0006958 // complement activation, classical pathway // inferred from electronic annotation /// 0007204 // elevation of cytosolic calcium ion concentration // inferred from direct assay /// 0030449 // regulation of complement activation // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation /// 0045730 // respiratory burst // non-traceable author statement","0005576 // extracellular region // traceable author statement /// 0005625 // soluble fraction // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0031225 // anchored to membrane // inferred from electronic annotation /// 0045121 // membrane raft // inferred from direct assay","0004872 // receptor activity // inferred from electronic annotation","chr1:207495024-207533214 (+) // 99.83 // q32.2"]
["11736013_at",655.8741,686.19183,706.04083,721.89514,717.96136,682.84296,-0.08576298,-0.020569801,0.020569801,0.052607536,0.044724464,-0.027627945,0.6439329,0.26612502,-1.0365734,-0.05182229,1.0365734,"down","GLE1",2733.0,"0006406 // mRNA export from nucleus // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016973 // poly(A)+ mRNA export from nucleus // inferred from electronic annotation /// 0051028 // mRNA transport // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005643 // nuclear pore // inferred from electronic annotation /// 0005643 // nuclear pore // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation","","chr9:131266490-131304571 (+) // 98.21 // q34.11"]
["11723466_a_at",540.931,523.19684,575.87695,533.45056,540.7076,540.66113,6.580353E-4,-0.0474329,0.090973854,-0.019432068,6.198883E-5,-6.198883E-5,0.8627284,0.63289124,1.0148104,0.02121027,1.0148104,"up","MRPS11",64963.0,"0006412 // translation // inferred from electronic annotation /// 0042769 // DNA damage response, detection of DNA damage // non-traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005763 // mitochondrial small ribosomal subunit // inferred from direct assay /// 0005763 // mitochondrial small ribosomal subunit // inferred from sequence or structural similarity /// 0005840 // ribosome // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003735 // structural constituent of ribosome // inferred from electronic annotation","chr15:89010683-89022215 (+) // 81.6 // q25.3"]
["11736929_at",6.6949663,6.8572693,6.4609175,6.7367144,6.944647,6.9102974,-0.021762848,0.012794495,-0.07310057,-0.012794495,0.03106165,0.023908138,0.6050353,0.21866332,-1.0291225,-0.04141468,1.0291225,"down","G6PC",2538.0,"0005975 // carbohydrate metabolic process // traceable author statement /// 0005977 // glycogen metabolic process // traceable author statement /// 0005977 // glycogen metabolic process // inferred from electronic annotation /// 0005980 // glycogen catabolic process // inferred from electronic annotation /// 0006094 // gluconeogenesis // inferred from electronic annotation /// 0006094 // gluconeogenesis // inferred from mutant phenotype /// 0006641 // triglyceride metabolic process // inferred from electronic annotation /// 0008202 // steroid metabolic process // inferred from electronic annotation /// 0008645 // hexose transport // traceable author statement /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0015758 // glucose transport // traceable author statement /// 0015760 // glucose-6-phosphate transport // inferred from electronic annotation /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0042593 // glucose homeostasis // inferred from mutant phenotype /// 0042593 // glucose homeostasis // inferred from electronic annotation /// 0042632 // cholesterol homeostasis // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046415 // urate metabolic process // inferred from electronic annotation /// 0051156 // glucose 6-phosphate metabolic process // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030176 // integral to endoplasmic reticulum membrane // traceable author statement","0003824 // catalytic activity // inferred from electronic annotation /// 0004346 // glucose-6-phosphatase activity // inferred from direct assay /// 0004346 // glucose-6-phosphatase activity // inferred from electronic annotation /// 0016773 // phosphotransferase activity, alcohol group as acceptor // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042301 // phosphate ion binding // inferred from mutant phenotype","chr17:41052814-41065386 (+) // 82.52 // q21.31"]
["11759294_s_at",284.88593,270.10443,299.10718,269.7679,274.10867,262.1326,0.066251755,-0.010615349,0.13652992,-0.012413979,0.010615349,-0.05383587,0.5318865,0.150238,1.0589249,0.082600296,1.0589249,"up","MLL",4297.0,"0006306 // DNA methylation // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006461 // protein complex assembly // inferred from direct assay /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation /// 0032411 // positive regulation of transporter activity // inferred from mutant phenotype /// 0035162 // embryonic hemopoiesis // traceable author statement /// 0035162 // embryonic hemopoiesis // inferred from electronic annotation /// 0043984 // histone H4-K16 acetylation // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0051568 // histone H3-K4 methylation // inferred from direct assay /// 0051568 // histone H3-K4 methylation // inferred from mutant phenotype /// 0051568 // histone H3-K4 methylation // inferred from electronic annotation /// 0051569 // regulation of histone H3-K4 methylation // inferred from electronic annotation /// 0080182 // histone H3-K4 trimethylation // inferred from direct assay /// 2001040 // positive regulation of cellular response to drug // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0035097 // histone methyltransferase complex // inferred from direct assay /// 0035097 // histone methyltransferase complex // inferred from electronic annotation /// 0044428 // nuclear part // inferred from electronic annotation /// 0071339 // MLL1 complex // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003680 // AT DNA binding // non-traceable author statement /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0018024 // histone-lysine N-methyltransferase activity // inferred from electronic annotation /// 0042800 // histone methyltransferase activity (H3-K4 specific) // inferred from direct assay /// 0042800 // histone methyltransferase activity (H3-K4 specific) // inferred from mutant phenotype /// 0042800 // histone methyltransferase activity (H3-K4 specific) // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0045322 // unmethylated CpG binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070577 // histone acetyl-lysine binding // inferred from direct assay","chr11:118307204-118397546 (+) // 98.0 // q23.3"]
["11761487_x_at",10.932101,8.507374,9.346221,9.706691,9.08856,9.08856,0.24628139,-0.11550355,0.020165682,0.074762106,-0.020165682,-0.020165682,0.9099744,0.74222004,1.0272858,0.038837627,1.0272858,"up","PDS5B",23047.0,"0007049 // cell cycle // inferred from electronic annotation /// 0007064 // mitotic sister chromatid cohesion // inferred from mutant phenotype /// 0007067 // mitosis // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0042127 // regulation of cell proliferation // inferred from direct assay /// 0051301 // cell division // inferred from electronic annotation","0000785 // chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005730 // nucleolus // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // traceable author statement","chr13:33160686-33226715 (+) // 83.1 // q13.1"]
["11731043_s_at",99.93748,103.49974,111.686714,109.50064,107.32128,106.56247,-0.097720146,-0.047190666,0.06263971,0.034121513,0.00511837,-0.005118847,0.7831797,0.4708697,-1.0272572,-0.03879745,1.0272572,"down","ERLIN2",11160.0,"0008219 // cell death // inferred from electronic annotation /// 0030433 // ER-associated protein catabolic process // inferred from direct assay","0005737 // cytoplasm // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr8:37594096-37616619 (+) // 82.54 // p11.23"]
["11757121_x_at",171.66225,185.58543,190.49777,166.85616,200.34381,180.65002,-0.093067646,0.019443035,0.057133675,-0.13403559,0.12983751,-0.019442558,0.9938808,0.97985643,1.0016533,0.0023832577,1.0016533,"up","EIF4A2 /// MIR1248 /// SNORA4 /// SNORA63 /// SNORA81 /// SNORD2","100302143 /// 1974 /// 6043 /// 619567 /// 619568 /// 677847","0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0000289 // nuclear-transcribed mRNA poly(A) tail shortening // traceable author statement /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // traceable author statement /// 0006413 // translational initiation // inferred from electronic annotation /// 0006446 // regulation of translational initiation // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation","0005829 // cytosol // traceable author statement /// 0016281 // eukaryotic translation initiation factor 4F complex // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0003743 // translation initiation factor activity // traceable author statement /// 0004386 // helicase activity // traceable author statement /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr3:186505087-186505222 (+) // 100.0 // q27.3"]
["11748262_a_at",48.320835,40.69584,41.406605,37.841206,44.845512,42.96386,0.19615316,-0.051610947,-0.026631355,-0.1565342,0.08847141,0.026631355,0.8691902,0.64794,1.0375019,0.05311402,1.0375019,"up","PMS1",5378.0,"0006200 // ATP catabolic process // not recorded /// 0006281 // DNA repair // inferred from electronic annotation /// 0006298 // mismatch repair // not recorded /// 0006298 // mismatch repair // inferred from electronic annotation /// 0006298 // mismatch repair // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007131 // reciprocal meiotic recombination // not recorded /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0032300 // mismatch repair complex // not recorded /// 0032389 // MutLalpha complex // not recorded","0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003697 // single-stranded DNA binding // not recorded /// 0005524 // ATP binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0016887 // ATPase activity // not recorded /// 0030983 // mismatched DNA binding // inferred from electronic annotation /// 0032407 // MutSalpha complex binding // not recorded","chr2:190649175-190671775 (+) // 76.61 // q32.2"]
["11752522_a_at",29.734941,28.878845,28.461132,21.313171,34.6431,26.42626,0.052656174,0.010509968,-0.010509968,-0.42775774,0.2730651,-0.11753082,0.8578926,0.62297297,1.0779521,0.10829313,1.0779521,"up","ST8SIA5",29906.0,"0005975 // carbohydrate metabolic process // traceable author statement /// 0006486 // protein glycosylation // inferred from electronic annotation /// 0006688 // glycosphingolipid biosynthetic process // traceable author statement","0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030173 // integral to Golgi membrane // inferred from electronic annotation","0003828 // alpha-N-acetylneuraminate alpha-2,8-sialyltransferase activity // inferred from electronic annotation /// 0008373 // sialyltransferase activity // traceable author statement /// 0008373 // sialyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation","chr18:44259630-44336772 (-) // 97.54 // q21.1"]
["11763653_at",11.720669,11.479044,11.305175,12.054167,15.465749,11.561581,0.009858131,-0.020194292,-0.04221344,0.05033517,0.40988016,-0.009858131,0.6488736,0.27264893,-1.1232162,-0.16763559,1.1232162,"down","TMC5",79838.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr16:19429029-19431584 (-) // 49.51 // p12.3"]
["11716666_a_at",2169.6724,2172.2527,2255.0752,2115.2937,2174.0684,2096.3733,-8.573532E-4,8.573532E-4,0.05484104,-0.03747654,0.0020627975,-0.05043888,0.49724334,0.124222755,1.0330412,0.046897847,1.0330412,"up","ID3",3399.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001656 // metanephros development // inferred from electronic annotation /// 0006275 // regulation of DNA replication // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // traceable author statement /// 0007417 // central nervous system development // inferred from electronic annotation /// 0009611 // response to wounding // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0030855 // epithelial cell differentiation // inferred from electronic annotation /// 0030903 // notochord development // inferred from electronic annotation /// 0042476 // odontogenesis // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0045668 // negative regulation of osteoblast differentiation // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0051726 // regulation of cell cycle // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred by curator /// 0005737 // cytoplasm // inferred from electronic annotation","0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003714 // transcription corepressor activity // traceable author statement /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation","chr1:23884424-23886335 (-) // 95.96 // p36.12"]
["11761050_at",12.925861,11.363099,11.666455,11.607788,13.631226,10.775073,0.1515305,-0.03437352,0.0036363602,-0.0036365986,0.22818518,-0.11103225,0.99507654,0.98418754,1.0016828,0.0024256667,1.0016828,"up","FGR",2268.0,"0002768 // immune response-regulating cell surface receptor signaling pathway // traceable author statement /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007229 // integrin-mediated signaling pathway // inferred from electronic annotation /// 0007229 // integrin-mediated signaling pathway // inferred from mutant phenotype /// 0007229 // integrin-mediated signaling pathway // inferred from sequence or structural similarity /// 0007596 // blood coagulation // traceable author statement /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0008360 // regulation of cell shape // inferred from sequence or structural similarity /// 0009615 // response to virus // traceable author statement /// 0014068 // positive regulation of phosphatidylinositol 3-kinase cascade // inferred from mutant phenotype /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from sequence or structural similarity /// 0043306 // positive regulation of mast cell degranulation // inferred from electronic annotation /// 0043306 // positive regulation of mast cell degranulation // inferred from sequence or structural similarity /// 0043552 // positive regulation of phosphatidylinositol 3-kinase activity // inferred from mutant phenotype /// 0045087 // innate immune response // inferred from electronic annotation /// 0045088 // regulation of innate immune response // inferred from electronic annotation /// 0045088 // regulation of innate immune response // inferred from sequence or structural similarity /// 0045859 // regulation of protein kinase activity // inferred from electronic annotation /// 0045859 // regulation of protein kinase activity // inferred from sequence or structural similarity /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0050715 // positive regulation of cytokine secretion // inferred from electronic annotation /// 0050715 // positive regulation of cytokine secretion // inferred from sequence or structural similarity /// 0050764 // regulation of phagocytosis // inferred from electronic annotation /// 0050764 // regulation of phagocytosis // inferred from sequence or structural similarity /// 0050830 // defense response to Gram-positive bacterium // inferred from electronic annotation /// 0050830 // defense response to Gram-positive bacterium // inferred from sequence or structural similarity","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005758 // mitochondrial intermembrane space // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from sequence or structural similarity /// 0042995 // cell projection // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0001784 // phosphotyrosine binding // inferred from electronic annotation /// 0001784 // phosphotyrosine binding // inferred from sequence or structural similarity /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // traceable author statement /// 0004715 // non-membrane spanning protein tyrosine kinase activity // inferred from direct assay /// 0004715 // non-membrane spanning protein tyrosine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from sequence or structural similarity /// 0034987 // immunoglobulin receptor binding // inferred from electronic annotation /// 0034987 // immunoglobulin receptor binding // inferred from sequence or structural similarity /// 0034988 // Fc-gamma receptor I complex binding // inferred from direct assay","chr1:27943391-27953105 (-) // 96.47 // p36.11"]
["11729603_a_at",2950.506,2926.865,3013.675,2944.7346,2938.5784,2938.419,0.00433445,-0.0072717667,0.034895897,0.0015096664,-0.0015096664,-0.0015878677,0.75649506,0.42554858,1.007781,0.011182203,1.007781,"up","MCM7",4176.0,"0000075 // cell cycle checkpoint // traceable author statement /// 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000084 // S phase of mitotic cell cycle // traceable author statement /// 0000216 // M/G1 transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006260 // DNA replication // traceable author statement /// 0006260 // DNA replication // inferred from electronic annotation /// 0006268 // DNA unwinding involved in replication // inferred from electronic annotation /// 0006270 // DNA-dependent DNA replication initiation // inferred from electronic annotation /// 0006271 // DNA strand elongation involved in DNA replication // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from mutant phenotype /// 0007049 // cell cycle // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from electronic annotation /// 0032508 // DNA duplex unwinding // inferred from electronic annotation /// 0042325 // regulation of phosphorylation // inferred from mutant phenotype","0000785 // chromatin // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0042555 // MCM complex // inferred from direct assay /// 0042555 // MCM complex // inferred from mutant phenotype","0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003678 // DNA helicase activity // inferred from electronic annotation /// 0003697 // single-stranded DNA binding // inferred from electronic annotation /// 0004003 // ATP-dependent DNA helicase activity // inferred from direct assay /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation","chr7:99543354-99699427 (-) // 97.65 // q22.1"]
["11745828_x_at",319.71033,319.19696,354.59723,294.9502,317.8053,297.24316,0.005470276,0.0031518936,0.15488625,-0.11082363,-0.0031518936,-0.09965134,0.47057694,0.107224286,1.0910459,0.12571174,1.0910459,"up","BNIP3L",665.0,"0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from direct assay /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0008634 // negative regulation of survival gene product expression // inferred from direct assay /// 0035694 // mitochondrial protein catabolic process // inferred from mutant phenotype /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0051607 // defense response to virus // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from direct assay /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005740 // mitochondrial envelope // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from mutant phenotype /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031224 // intrinsic to membrane // traceable author statement","0005515 // protein binding // inferred from physical interaction /// 0005521 // lamin binding // inferred from direct assay /// 0005521 // lamin binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from direct assay","chr8:26247877-26268564 (+) // 98.61 // p21.2"]
["11722341_s_at",129.98471,118.16026,121.89107,108.784546,126.52551,117.02548,0.11517334,-0.022423744,0.022423744,-0.14169502,0.07625961,-0.03634596,0.7317729,0.3886353,1.0514048,0.07231827,1.0514048,"up","PRR12",57479.0,"","","0003677 // DNA binding // inferred from electronic annotation","chr19:50094903-50129695 (+) // 95.55 // q13.33"]
["11749999_x_at",19.957111,21.916306,17.21357,20.854792,22.848764,20.323467,-0.044859886,0.09024191,-0.25821638,0.0186162,0.15035343,-0.0186162,0.7054594,0.3467988,-1.0875356,-0.12106265,1.0875356,"down","TMEM150B",284417.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr19:55824168-55845417 (-) // 89.86 // q13.42"]
["11747525_a_at",200.28416,205.41515,203.83755,219.18884,218.7595,217.75449,-0.07857466,-0.042079926,-0.053203106,0.05155182,0.048722744,0.04207945,0.08459432,7.004198E-4,-1.0757955,-0.1054039,1.0757955,"down","C6orf89",221477.0,"0042060 // wound healing // inferred from direct assay /// 0045787 // positive regulation of cell cycle // inferred from direct assay /// 0050673 // epithelial cell proliferation // inferred from direct assay","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr6:36853730-36892099 (+) // 87.87 // p21.2"]
["11724618_a_at",21.194397,22.140224,24.681604,23.96878,25.29333,22.046959,-0.1202302,-0.057243347,0.09952307,0.057243347,0.13484383,-0.06333351,0.78490645,0.4733433,-1.0489177,-0.06890142,1.0489177,"down","MOCS1",4337.0,"0006766 // vitamin metabolic process // traceable author statement /// 0006767 // water-soluble vitamin metabolic process // traceable author statement /// 0006777 // Mo-molybdopterin cofactor biosynthetic process // inferred from direct assay /// 0006777 // Mo-molybdopterin cofactor biosynthetic process // inferred from mutant phenotype /// 0006777 // Mo-molybdopterin cofactor biosynthetic process // traceable author statement /// 0006777 // Mo-molybdopterin cofactor biosynthetic process // inferred from electronic annotation /// 0032324 // molybdopterin cofactor biosynthetic process // traceable author statement /// 0032324 // molybdopterin cofactor biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement","0005634 // nucleus // non-traceable author statement /// 0005829 // cytosol // traceable author statement /// 0019008 // molybdopterin synthase complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation /// 0051539 // 4 iron, 4 sulfur cluster binding // inferred from direct assay /// 0051539 // 4 iron, 4 sulfur cluster binding // inferred from electronic annotation","chr6:39871940-39895455 (-) // 94.39 // p21.2"]
["11757976_s_at",641.04663,601.67694,646.46594,628.82324,617.5391,652.4475,0.013887405,-0.077552795,0.026032448,-0.013887405,-0.040011406,0.039319992,0.9531319,0.85760593,-1.0053408,-0.007684664,1.0053408,"down","HTATSF1",27336.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0019079 // viral genome replication // traceable author statement /// 0032784 // regulation of transcription elongation, DNA-dependent // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005730 // nucleolus // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation","chrX:135594136-135594496 (+) // 100.0 // q26.3"]
["11761995_a_at",10.276507,10.732412,9.97987,10.016847,10.709405,10.671315,-0.027194023,0.03543043,-0.06945109,-0.064115524,0.032334328,0.027194262,0.8870887,0.68804604,-1.0131698,-0.01887593,1.0131698,"down","IL1RAP",3556.0,"0006461 // protein complex assembly // traceable author statement /// 0006954 // inflammatory response // traceable author statement /// 0006955 // immune response // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // inferred from electronic annotation /// 0042094 // interleukin-2 biosynthetic process // inferred from electronic annotation /// 0045087 // innate immune response // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031224 // intrinsic to membrane // inferred from electronic annotation","0004871 // signal transducer activity // traceable author statement /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0004908 // interleukin-1 receptor activity // inferred from electronic annotation","chr3:190231890-190374985 (+) // 94.58 // q28"]
["11762079_at",14.889253,14.447822,13.338707,16.15698,14.248288,17.300123,0.02170968,-0.02170968,-0.13694286,0.13959599,-0.04177308,0.23822069,0.5555116,0.17119618,-1.115478,-0.15766211,1.115478,"down","NIT2",56954.0,"0006807 // nitrogen compound metabolic process // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay","0016787 // hydrolase activity // inferred from electronic annotation /// 0016810 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds // inferred from electronic annotation /// 0050152 // omega-amidase activity // inferred from electronic annotation","chr3:100053600-100068855 (+) // 77.58 // q12.2"]
["11730789_a_at",10.166854,9.696263,8.682465,9.557479,10.020082,9.041589,0.07877159,0.010399342,-0.14892507,-0.01039958,0.057792902,-0.09045339,0.9847724,0.9478249,-1.0038646,-0.0055647595,1.0038646,"down","KLHL10",317719.0,"0000902 // cell morphogenesis // inferred from electronic annotation /// 0007286 // spermatid development // inferred from electronic annotation /// 0008584 // male gonad development // inferred from electronic annotation /// 0009566 // fertilization // inferred from electronic annotation /// 0048808 // male genitalia morphogenesis // inferred from electronic annotation /// 0048873 // homeostasis of number of cells within a tissue // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","","chr17:39994031-40004613 (+) // 99.36 // q21.2"]
["11725428_a_at",35.8778,30.198345,35.1116,37.950813,28.507708,31.14095,0.11771107,-0.13091087,0.0865674,0.1987505,-0.21402836,-0.0865674,0.89533144,0.70758283,1.0413134,0.05840435,1.0413134,"up","ABLIM3",22885.0,"0007010 // cytoskeleton organization // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0008270 // zinc ion binding // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr5:148521045-148639999 (+) // 98.42 // q32"]
["11735558_a_at",27.727676,28.779291,26.58125,28.704128,27.57187,28.140558,-0.010662079,0.043042183,-0.07157993,0.039269447,-0.018791676,0.010662079,0.82994837,0.5618304,-1.0163847,-0.023446592,1.0163847,"down","TBC1D28",254272.0,"0032313 // regulation of Rab GTPase activity // inferred from electronic annotation /// 0032851 // positive regulation of Rab GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005097 // Rab GTPase activator activity // inferred from electronic annotation","chr17:15635560-15652509 (+) // 97.58 // p12 /// chr17:18538838-18547740 (-) // 99.95 // p11.2"]
["11752796_x_at",13.631568,12.25965,12.038592,11.781843,13.094823,12.383866,0.14576173,-0.0072722435,-0.03352332,-0.06462455,0.0878067,0.007272005,0.9110371,0.74465454,1.017365,0.024837337,1.017365,"up","C3orf33",285315.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0016788 // hydrolase activity, acting on ester bonds // inferred from electronic annotation","chr3:155480552-155524076 (-) // 80.35 // q25.31"]
["11735281_a_at",94.113716,88.38869,84.60893,84.157364,85.04072,91.56847,0.11839771,0.027853966,-0.035197258,-0.042918205,-0.027853966,0.07884359,0.8429185,0.59059757,1.0240794,0.034327634,1.0240794,"up","BTRC",8945.0,"0000209 // protein polyubiquitination // inferred from electronic annotation /// 0000278 // mitotic cell cycle // traceable author statement /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0006511 // ubiquitin-dependent protein catabolic process // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0030163 // protein catabolic process // inferred from electronic annotation /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0031648 // protein destabilization // inferred from mutant phenotype /// 0033598 // mammary gland epithelial cell proliferation // inferred from electronic annotation /// 0042753 // positive regulation of circadian rhythm // inferred from electronic annotation /// 0043122 // regulation of I-kappaB kinase/NF-kappaB cascade // inferred from electronic annotation /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045862 // positive regulation of proteolysis // inferred from mutant phenotype /// 0045879 // negative regulation of smoothened signaling pathway // traceable author statement /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051726 // regulation of cell cycle // inferred from electronic annotation /// 0060444 // branching involved in mammary gland duct morphogenesis // inferred from electronic annotation /// 0061136 // regulation of proteasomal protein catabolic process // inferred from electronic annotation /// 0071407 // cellular response to organic cyclic compound // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0019005 // SCF ubiquitin ligase complex // inferred from direct assay","0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008013 // beta-catenin binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0045309 // protein phosphorylated amino acid binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation","chr10:103113821-103317070 (+) // 99.4 // q24.32"]
["11717019_x_at",2299.1157,2333.5283,2298.3804,2030.2075,2091.7651,2168.223,0.042513847,0.06394768,0.04205227,-0.1369381,-0.093844414,-0.04205227,0.17988764,0.0077524176,1.1022485,0.14044958,1.1022485,"up","ATP1A1",476.0,"0002026 // regulation of the force of heart contraction // inferred from electronic annotation /// 0002028 // regulation of sodium ion transport // inferred from sequence or structural similarity /// 0006754 // ATP biosynthetic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // inferred from electronic annotation /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008217 // regulation of blood pressure // inferred from electronic annotation /// 0015672 // monovalent inorganic cation transport // inferred from electronic annotation /// 0031947 // negative regulation of glucocorticoid biosynthetic process // inferred from electronic annotation /// 0034220 // ion transmembrane transport // traceable author statement /// 0042493 // response to drug // inferred from electronic annotation /// 0045822 // negative regulation of heart contraction // inferred from electronic annotation /// 0045823 // positive regulation of heart contraction // inferred from electronic annotation /// 0045989 // positive regulation of striated muscle contraction // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement","0005624 // membrane fraction // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0005792 // microsome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005890 // sodium:potassium-exchanging ATPase complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from sequence or structural similarity /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0042383 // sarcolemma // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0003869 // 4-nitrophenylphosphatase activity // inferred from electronic annotation /// 0005391 // sodium:potassium-exchanging ATPase activity // inferred from electronic annotation /// 0005391 // sodium:potassium-exchanging ATPase activity // inferred from sequence or structural similarity /// 0005391 // sodium:potassium-exchanging ATPase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0015077 // monovalent inorganic cation transmembrane transporter activity // inferred from electronic annotation /// 0015662 // ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016820 // hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051087 // chaperone binding // inferred from sequence or structural similarity","chr1:116915835-116947394 (+) // 94.22 // p13.1"]
["11754530_a_at",435.37543,428.78088,460.65466,475.18906,487.43423,460.0193,-0.08043003,-0.10244942,9.95636E-4,0.045811653,0.082517624,-9.95636E-4,0.38587052,0.060164295,-1.0740584,-0.10307246,1.0740584,"down","CCDC14",64770.0,"","0005813 // centrosome // inferred from direct assay","","chr3:123632565-123680089 (-) // 97.36 // q21.1"]
["11716990_at",23.46487,25.151003,24.952589,18.98656,23.144463,20.771666,0.009917736,0.11003113,0.09860468,-0.29560614,-0.009917736,-0.16596794,0.38531598,0.060000144,1.1728473,0.23001516,1.1728473,"up","KIAA0317",9870.0,"0006464 // cellular protein modification process // inferred from electronic annotation /// 0042787 // protein ubiquitination involved in ubiquitin-dependent protein catabolic process // not recorded","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // not recorded /// 0005737 // cytoplasm // not recorded /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004842 // ubiquitin-protein ligase activity // not recorded /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation","chr14:75127958-75179816 (-) // 99.49 // q24.3"]
["11729901_a_at",81.1185,84.3237,77.79074,76.747696,76.69237,82.22099,0.030216694,0.08612347,-0.030216217,-0.049691677,-0.05073166,0.049691677,0.7322786,0.38945886,1.0321256,0.045618534,1.0321256,"up","AGFG2",3268.0,"0032312 // regulation of ARF GTPase activity // inferred from electronic annotation","","0008060 // ARF GTPase activator activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:100136833-100165842 (+) // 95.66 // q22.1"]
["11747918_a_at",31.528055,26.785824,25.854462,28.798168,24.86662,30.568851,0.18291283,-0.052253723,-0.10331011,0.052253723,-0.159513,0.13833904,0.9976807,0.99253273,-1.0008624,-0.0012435863,1.0008624,"down","UBAP2",55833.0,"","","","chr9:33927357-34048947 (-) // 99.7 // p13.3"]
["11726321_a_at",677.2723,680.45483,745.4715,617.5236,693.10254,615.87665,-0.0033817291,0.0033817291,0.13503551,-0.13662338,0.029951096,-0.14047623,0.5335843,0.15160641,1.0923194,0.12739472,1.0923194,"up","ERO1L",30001.0,"0006457 // protein folding // traceable author statement /// 0006457 // protein folding // inferred from electronic annotation /// 0006464 // cellular protein modification process // traceable author statement /// 0006467 // protein thiol-disulfide exchange // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0009266 // response to temperature stimulus // traceable author statement /// 0022900 // electron transport chain // inferred from electronic annotation /// 0030968 // endoplasmic reticulum unfolded protein response // inferred from electronic annotation /// 0050873 // brown fat cell differentiation // inferred from electronic annotation /// 0051085 // chaperone mediated protein folding requiring cofactor // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0016491 // oxidoreductase activity // inferred from direct assay /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016671 // oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor // inferred from electronic annotation /// 0050660 // flavin adenine dinucleotide binding // inferred from electronic annotation","chr14:53108162-53162687 (-) // 77.92 // q22.1"]
["11735288_x_at",11.573344,12.560248,12.001471,12.07247,12.746077,13.691685,-0.089487076,0.028572083,-0.03708172,-0.028572083,0.04976034,0.15300703,0.6073535,0.22142667,-1.0649093,-0.09073061,1.0649093,"down","AP4S1",11154.0,"0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0005794 // Golgi apparatus // inferred from electronic annotation /// 0005905 // coated pit // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005215 // transporter activity // traceable author statement /// 0008565 // protein transporter activity // inferred from electronic annotation","chr14:31494675-31555007 (+) // 82.19 // q12"]
["11724868_a_at",352.63046,356.06387,339.25204,357.42786,337.0661,325.04074,0.027899742,0.0418787,-0.027899742,0.047394753,-0.037225723,-0.0896368,0.75389475,0.42194146,1.0284337,0.040448762,1.0284337,"up","IPO8",10526.0,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008536 // Ran GTPase binding // traceable author statement /// 0008565 // protein transporter activity // inferred from electronic annotation","chr12:30781921-30848929 (-) // 98.68 // p11.21"]
["11723518_at",50.953194,45.704205,55.814552,47.84243,50.337032,50.362095,0.017193317,-0.13965225,0.14866209,-0.07368851,-3.5905838E-4,3.5905838E-4,0.90081143,0.72103214,1.0233483,0.0332973,1.0233483,"up","ELAC1",55520.0,"0008033 // tRNA processing // inferred from electronic annotation /// 0042779 // tRNA 3'-trailer cleavage // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0004518 // nuclease activity // inferred from electronic annotation /// 0004519 // endonuclease activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016891 // endoribonuclease activity, producing 5'-phosphomonoesters // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr18:48494386-48514600 (+) // 86.84 // q21.2"]
["11724076_a_at",5.7377777,5.0332594,5.446367,6.00004,5.324928,5.110227,0.09146404,-0.09753513,0.016266108,0.15594411,-0.016266108,-0.07564068,0.9504123,0.84927577,-1.0125179,-0.017947454,1.0125179,"down","DDX3Y",8653.0,"","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chrY:15016018-15032390 (+) // 99.32 // q11.21"]
["11722717_a_at",64.10308,58.28816,57.75196,68.11941,55.322628,69.101395,0.06859541,-0.06859493,-0.08192873,0.15626717,-0.14392853,0.17691612,0.7848527,0.47326332,-1.0646611,-0.090394326,1.0646611,"down","GABPA",2551.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005730 // nucleolus // inferred from direct assay","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003713 // transcription coactivator activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from direct assay","chr21:27107328-27144771 (+) // 98.94 // q21.3"]
["11763984_s_at",196.45192,194.77855,172.07108,191.71457,182.04063,196.6808,0.023779392,0.011437893,-0.16739273,-0.011437416,-0.08613682,0.02545929,0.9289437,0.7889316,-1.0139737,-0.02002025,1.0139737,"down","PLEKHA8",84725.0,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0046836 // glycolipid transport // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0005543 // phospholipid binding // inferred from electronic annotation /// 0017089 // glycolipid transporter activity // inferred from electronic annotation /// 0051861 // glycolipid binding // inferred from electronic annotation","chr7:30123830-30124266 (+) // 96.67 // p14.3"]
["11742080_a_at",118.36152,115.49117,122.916725,118.726295,116.12488,118.08846,0.001666069,-0.033751488,0.0561471,0.006104946,-0.025856972,-0.0016665459,0.8544741,0.6152514,1.0105636,0.015160138,1.0105636,"up","SMARCD2",6603.0,"0006337 // nucleosome disassembly // inferred from direct assay /// 0006338 // chromatin remodeling // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // non-traceable author statement /// 0016568 // chromatin modification // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0016514 // SWI/SNF complex // inferred from direct assay","0003713 // transcription coactivator activity // non-traceable author statement","chr17:61909440-61920351 (-) // 99.56 // q23.3"]
["11717876_a_at",122.44595,127.20534,124.3238,105.34531,116.885895,111.95633,0.03352213,0.08853626,0.055479527,-0.18349695,-0.033522606,-0.09568739,0.27748367,0.02432415,1.1199349,0.1634149,1.1199349,"up","PPFIA1",8500.0,"0007160 // cell-matrix adhesion // traceable author statement /// 0007165 // signal transduction // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement","0004871 // signal transducer activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr11:70116814-70230607 (+) // 97.34 // q13.3"]
["11738402_a_at",30.702084,32.12304,27.92692,36.449318,35.906105,32.776897,-0.07980728,-0.014535427,-0.21648741,0.16774797,0.14608526,0.014535427,0.35854292,0.04931095,-1.1591492,-0.21306624,1.1591492,"down","WDPCP",51057.0,"0016476 // regulation of embryonic cell shape // inferred from sequence or structural similarity /// 0030030 // cell projection organization // inferred from electronic annotation /// 0032185 // septin cytoskeleton organization // inferred from sequence or structural similarity /// 0032880 // regulation of protein localization // inferred from sequence or structural similarity /// 0060271 // cilium morphogenesis // inferred from sequence or structural similarity","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0005938 // cell cortex // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from sequence or structural similarity /// 0035085 // cilium axoneme // inferred from sequence or structural similarity /// 0035085 // cilium axoneme // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","","chr2:63348536-63665141 (-) // 88.61 // p15"]
["11730785_a_at",31.255428,33.814953,32.927536,29.593296,32.192757,32.757328,-0.05517006,0.05838442,0.020017624,-0.1340065,-0.012540817,0.012540817,0.74201816,0.40391657,1.0369978,0.052412827,1.0369978,"up","TTC21A",199223.0,"","","","chr3:39149151-39180394 (+) // 99.58 // p22.2"]
["11734621_x_at",10.633727,9.42051,11.090452,11.498974,10.751169,9.462853,-0.007922888,-0.18269348,0.052747726,0.10493469,0.007923126,-0.17622304,0.943942,0.8302317,-1.017363,-0.024834463,1.017363,"down","VPS13B",157680.0,"0006810 // transport // inferred from electronic annotation /// 0008104 // protein localization // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","","","chr8:100025494-100133985 (+) // 87.57 // q22.2"]
["11719893_a_at",41.34049,45.216454,45.70499,41.88405,50.846935,40.050533,-0.07406902,0.055223465,0.07072735,-0.055223465,0.22453642,-0.11980295,0.9981676,0.9948535,1.0005481,7.9055957E-4,1.0005481,"up","VASH1",22846.0,"0001525 // angiogenesis // inferred from direct assay /// 0001525 // angiogenesis // inferred from electronic annotation /// 0001937 // negative regulation of endothelial cell proliferation // inferred from direct assay /// 0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0010596 // negative regulation of endothelial cell migration // inferred from genetic interaction /// 0016525 // negative regulation of angiogenesis // inferred from direct assay /// 0016525 // negative regulation of angiogenesis // inferred from electronic annotation /// 0043537 // negative regulation of blood vessel endothelial cell migration // inferred from direct assay","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0045177 // apical part of cell // inferred from direct assay","","chr14:77228234-77249365 (+) // 91.73 // q24.3"]
["11742442_a_at",188.5193,204.18002,209.73271,204.28925,201.41682,205.67766,-0.11551523,-3.8576126E-4,0.038324356,3.8528442E-4,-0.020043373,0.010157585,0.87219095,0.65479213,-1.0158533,-0.022692056,1.0158533,"down","USH1C",10083.0,"0000086 // G2/M transition of mitotic cell cycle // inferred from mutant phenotype /// 0007605 // sensory perception of sound // inferred from mutant phenotype /// 0007605 // sensory perception of sound // inferred from electronic annotation /// 0045494 // photoreceptor cell maintenance // inferred from mutant phenotype /// 0050953 // sensory perception of light stimulus // inferred from mutant phenotype /// 0050957 // equilibrioception // inferred from mutant phenotype","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0032420 // stereocilium // traceable author statement /// 0045177 // apical part of cell // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr11:17515441-17565963 (-) // 100.0 // p15.1"]
["11726718_a_at",206.43124,214.77377,223.35252,224.84018,203.58736,205.86028,-0.028578281,0.028577805,0.08508301,0.09466028,-0.048591614,-0.032574177,0.88799155,0.6916889,1.0166779,0.02386262,1.0166779,"up","GEMIN7",79760.0,"0000387 // spliceosomal snRNP assembly // traceable author statement /// 0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0034660 // ncRNA metabolic process // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0015030 // Cajal body // inferred from electronic annotation /// 0016604 // nuclear body // inferred from direct assay /// 0032797 // SMN complex // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr19:45582519-45594863 (+) // 99.65 // q13.32"]
["11721980_a_at",26.416086,23.152964,29.718298,26.923595,29.630604,22.260538,-0.013727188,-0.20394707,0.15620756,0.013727188,0.15194416,-0.2606554,0.9847724,0.9476028,1.0077742,0.011172476,1.0077742,"up","SLC36A1",206358.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006865 // amino acid transport // traceable author statement /// 0006865 // amino acid transport // inferred from electronic annotation /// 0015804 // neutral amino acid transport // inferred from electronic annotation /// 0015808 // L-alanine transport // inferred from electronic annotation /// 0015816 // glycine transport // inferred from electronic annotation /// 0015824 // proline transport // inferred from electronic annotation /// 0015992 // proton transport // inferred from electronic annotation /// 0035524 // proline transmembrane transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement","0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0015078 // hydrogen ion transmembrane transporter activity // inferred from electronic annotation /// 0015175 // neutral amino acid transmembrane transporter activity // inferred from electronic annotation /// 0015180 // L-alanine transmembrane transporter activity // inferred from electronic annotation /// 0015187 // glycine transmembrane transporter activity // inferred from electronic annotation /// 0015193 // L-proline transmembrane transporter activity // inferred from electronic annotation /// 0015293 // symporter activity // inferred from electronic annotation","chr5:150827156-150871940 (+) // 97.93 // q33.1"]
["11754989_a_at",202.39607,211.9902,193.02153,218.20723,227.19983,221.87392,-0.08766699,-0.020850658,-0.15608644,0.020850658,0.07911348,0.044891834,0.30922052,0.032644168,-1.0992249,-0.13648662,1.0992249,"down","DMXL2",23312.0,"","0008021 // synaptic vesicle // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030672 // synaptic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0017137 // Rab GTPase binding // inferred from direct assay","chr15:51739974-51773676 (-) // 99.31 // q21.2"]
["11717317_at",245.30432,250.07584,248.57883,219.79721,231.07062,232.12636,0.03983116,0.06762409,0.05896187,-0.11856842,-0.0464077,-0.03983116,0.19305323,0.0095520215,1.0895568,0.123741426,1.0895568,"up","AGPAT6",137964.0,"0002071 // glandular epithelial cell maturation // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006637 // acyl-CoA metabolic process // inferred from direct assay /// 0006641 // triglyceride metabolic process // inferred from electronic annotation /// 0006656 // phosphatidylcholine biosynthetic process // inferred from direct assay /// 0007595 // lactation // inferred from sequence or structural similarity /// 0007595 // lactation // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008610 // lipid biosynthetic process // inferred from sequence or structural similarity /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0008654 // phospholipid biosynthetic process // inferred from electronic annotation /// 0016024 // CDP-diacylglycerol biosynthetic process // inferred from electronic annotation /// 0019432 // triglyceride biosynthetic process // inferred from direct assay /// 0019432 // triglyceride biosynthetic process // inferred from sequence or structural similarity /// 0019432 // triglyceride biosynthetic process // traceable author statement /// 0019432 // triglyceride biosynthetic process // inferred from electronic annotation /// 0030879 // mammary gland development // inferred from electronic annotation /// 0040014 // regulation of multicellular organism growth // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046339 // diacylglycerol metabolic process // inferred from electronic annotation","0005624 // membrane fraction // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0003841 // 1-acylglycerol-3-phosphate O-acyltransferase activity // inferred from direct assay /// 0004366 // glycerol-3-phosphate O-acyltransferase activity // inferred from direct assay /// 0004366 // glycerol-3-phosphate O-acyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation","chr8:41435706-41482520 (+) // 91.33 // p11.21"]
["11730625_at",7.3544736,8.991759,8.609237,7.8662124,7.578756,8.99969,-0.16215515,0.12782621,0.06510806,-0.06510782,-0.11881614,0.12909794,0.9393715,0.81762123,1.0199759,0.028535064,1.0199759,"up","KLB",152831.0,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004553 // hydrolase activity, hydrolyzing O-glycosyl compounds // inferred from electronic annotation /// 0017134 // fibroblast growth factor binding // inferred from physical interaction /// 0043169 // cation binding // inferred from electronic annotation","chr4:39408472-39453143 (+) // 89.28 // p14"]
["11757134_at",41.382347,35.400753,26.089262,30.998129,29.552643,30.64205,0.4251685,0.19993305,-0.24039078,0.00833416,-0.06055975,-0.00833416,0.7939625,0.492178,1.1083577,0.14842351,1.1083577,"up","SNORA65",26783.0,"","","","chr9:130210780-130210916 (-) // 99.27 // q33.3"]
["11749086_x_at",21.022812,20.594091,19.596724,22.44242,22.203547,25.103333,-0.039417267,-0.06914234,-0.14076042,0.054855347,0.039417267,0.216506,0.34270862,0.04360996,-1.138157,-0.18669958,1.138157,"down","CACNA1C",775.0,"0006112 // energy reserve metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0006874 // cellular calcium ion homeostasis // inferred from electronic annotation /// 0006939 // smooth muscle contraction // inferred from electronic annotation /// 0007204 // elevation of cytosolic calcium ion concentration // inferred from direct assay /// 0007268 // synaptic transmission // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007628 // adult walking behavior // inferred from electronic annotation /// 0008217 // regulation of blood pressure // inferred from electronic annotation /// 0008542 // visual learning // inferred from electronic annotation /// 0017156 // calcium ion-dependent exocytosis // inferred from electronic annotation /// 0019229 // regulation of vasoconstriction // inferred from electronic annotation /// 0030073 // insulin secretion // inferred from electronic annotation /// 0030252 // growth hormone secretion // inferred from electronic annotation /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0042593 // glucose homeostasis // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046620 // regulation of organ growth // inferred from electronic annotation /// 0050796 // regulation of insulin secretion // traceable author statement /// 0051925 // regulation of calcium ion transport via voltage-gated calcium channel activity // inferred from direct assay /// 0051925 // regulation of calcium ion transport via voltage-gated calcium channel activity // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0060083 // smooth muscle contraction involved in micturition // inferred from electronic annotation /// 0060402 // calcium ion transport into cytosol // traceable author statement /// 0070588 // calcium ion transmembrane transport // inferred from electronic annotation","0002095 // caveolar macromolecular signaling complex // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005891 // voltage-gated calcium channel complex // inferred from direct assay /// 0005891 // voltage-gated calcium channel complex // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from direct assay /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030018 // Z disc // inferred from sequence or structural similarity /// 0030018 // Z disc // inferred from electronic annotation /// 0030315 // T-tubule // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0042383 // sarcolemma // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043198 // dendritic shaft // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005245 // voltage-gated calcium channel activity // inferred from direct assay /// 0005245 // voltage-gated calcium channel activity // inferred from electronic annotation /// 0005262 // calcium channel activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0051721 // protein phosphatase 2A binding // inferred from electronic annotation","chr12:2224418-2801325 (+) // 96.86 // p13.33"]
["11744665_a_at",51.98982,47.328495,49.275494,50.261738,52.706123,50.05944,0.051677704,-0.08384228,-0.025681019,0.0029091835,0.07141924,-0.0029091835,0.7405537,0.40136376,-1.030317,-0.043088213,1.030317,"down","RAB40C",57799.0,"0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0019003 // GDP binding // inferred from electronic annotation","chr16:640106-678070 (+) // 95.88 // p13.3"]
["11720716_a_at",23.043821,25.73619,24.69822,21.770176,20.54164,22.658955,0.012149334,0.17156792,0.11217642,-0.069877625,-0.15367937,-0.012149334,0.35132194,0.04615473,1.1306874,0.17720006,1.1306874,"up","FGF13",2258.0,"0000165 // MAPK cascade // inferred from direct assay /// 0007165 // signal transduction // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0007399 // nervous system development // traceable author statement /// 0045860 // positive regulation of protein kinase activity // inferred from genetic interaction /// 2001257 // regulation of cation channel activity // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from physical interaction","0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // inferred from electronic annotation /// 0008083 // growth factor activity // traceable author statement /// 0030295 // protein kinase activator activity // inferred from genetic interaction","chrX:137713733-137793959 (-) // 91.8 // q26.3"]
["11736864_a_at",11.640698,12.351853,12.895873,13.498689,13.437602,14.671837,-0.17741513,-0.09186506,-0.029683113,0.03622651,0.029683113,0.15645695,0.34162372,0.043073844,-1.1280075,-0.1737767,1.1280075,"down","KIAA1958",158405.0,"","","","chr9:115249247-115427580 (+) // 91.92 // q32"]
["11762384_at",15.5794525,17.563623,14.673753,14.224406,13.39717,15.102371,0.065638065,0.23858404,-0.020768642,-0.065638065,-0.15207839,0.020768642,0.5358178,0.15368672,1.1173908,0.16013378,1.1173908,"up","GOLGA4",2803.0,"0000042 // protein targeting to Golgi // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // traceable author statement /// 0043001 // Golgi to plasma membrane protein transport // inferred from direct assay","0000139 // Golgi membrane // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005802 // trans-Golgi network // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0051020 // GTPase binding // inferred from physical interaction","chr3:37284681-37361871 (+) // 76.74 // p22.2"]
["11738539_a_at",6.0317955,6.363229,6.4466825,6.150251,6.9532413,5.9994035,-0.05261469,0.024556637,0.04335475,-0.024556875,0.15248346,-0.06038308,0.94057024,0.8209019,-1.0121447,-0.017415537,1.0121447,"down","DISC1 /// TSNAX-DISC1","100303453 /// 27185","0000226 // microtubule cytoskeleton organization // inferred from mutant phenotype /// 0001764 // neuron migration // inferred from mutant phenotype /// 0002052 // positive regulation of neuroblast proliferation // inferred from genetic interaction /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0010975 // regulation of neuron projection development // inferred from electronic annotation /// 0015031 // protein transport // traceable author statement /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030177 // positive regulation of Wnt receptor signaling pathway // inferred from genetic interaction /// 0051602 // response to electrical stimulus // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0005813 // centrosome // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005871 // kinesin complex // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0033267 // axon part // inferred from electronic annotation /// 0044297 // cell body // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0003677 // DNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008565 // protein transporter activity // traceable author statement /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr1:231762560-232002433 (+) // 90.13 // q42.2"]
["11756050_x_at",8.149906,10.016043,9.723153,9.219302,8.547502,8.991759,-0.15984702,0.1376102,0.09479356,0.018027067,-0.09112787,-0.018027067,0.8513154,0.60821784,1.0385435,0.054561593,1.0385435,"up","CD1E",913.0,"0006955 // immune response // non-traceable author statement /// 0006955 // immune response // inferred from electronic annotation /// 0019882 // antigen processing and presentation // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0043202 // lysosomal lumen // inferred from electronic annotation","","chr1:158323778-158326686 (+) // 100.0 // q23.1"]
["11723692_a_at",9.118008,9.401822,8.854142,8.032307,7.9362473,7.769617,0.112635136,0.15685701,0.07026911,-0.07026911,-0.08762646,-0.11823988,0.11352226,0.002011064,1.1529251,0.20529883,1.1529251,"up","CD302 /// LY75-CD302","100526664 /// 9936","0006897 // endocytosis // inferred from electronic annotation /// 0006909 // phagocytosis // inferred from direct assay /// 0006954 // inflammatory response // traceable author statement /// 0006955 // immune response // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0005902 // microvillus // inferred from electronic annotation /// 0005938 // cell cortex // inferred from direct assay /// 0005938 // cell cortex // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030175 // filopodium // inferred from direct assay /// 0030175 // filopodium // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004872 // receptor activity // traceable author statement /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr2:160624982-160639981 (-) // 79.5 // q24.2"]
["11728253_a_at",12.470424,13.46948,13.061193,11.368338,13.944344,13.898262,-0.08897972,0.022203922,-0.022203684,-0.22246885,0.07218981,0.067414045,0.9954398,0.98510987,-1.0014137,-0.002038102,1.0014137,"down","NMNAT2",23057.0,"0006766 // vitamin metabolic process // traceable author statement /// 0006767 // water-soluble vitamin metabolic process // traceable author statement /// 0009058 // biosynthetic process // inferred from electronic annotation /// 0009435 // NAD biosynthetic process // inferred by curator /// 0009435 // NAD biosynthetic process // inferred from electronic annotation /// 0019363 // pyridine nucleotide biosynthetic process // inferred from electronic annotation /// 0019674 // NAD metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0000139 // Golgi membrane // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005770 // late endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000309 // nicotinamide-nucleotide adenylyltransferase activity // traceable author statement /// 0000309 // nicotinamide-nucleotide adenylyltransferase activity // inferred from electronic annotation /// 0004515 // nicotinate-nucleotide adenylyltransferase activity // inferred from direct assay /// 0004515 // nicotinate-nucleotide adenylyltransferase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016779 // nucleotidyltransferase activity // inferred from electronic annotation","chr1:183217109-183387988 (-) // 92.77 // q25.3"]
["11741417_x_at",657.408,641.1619,671.34705,640.4562,657.55927,673.05865,-1.6593933E-4,-0.036266327,0.030103683,-0.03785515,1.6593933E-4,0.033777237,0.9934663,0.9785922,-1.0005585,-8.055138E-4,1.0005585,"down","EIF4E",1977.0,"0000082 // G1/S transition of mitotic cell cycle // inferred from mutant phenotype /// 0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0000289 // nuclear-transcribed mRNA poly(A) tail shortening // traceable author statement /// 0006406 // mRNA export from nucleus // traceable author statement /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred from sequence or structural similarity /// 0006413 // translational initiation // traceable author statement /// 0006413 // translational initiation // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045931 // positive regulation of mitotic cell cycle // inferred from mutant phenotype","0000932 // cytoplasmic mRNA processing body // inferred from direct assay /// 0000932 // cytoplasmic mRNA processing body // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005845 // mRNA cap binding complex // inferred from direct assay /// 0005845 // mRNA cap binding complex // inferred from electronic annotation /// 0016281 // eukaryotic translation initiation factor 4F complex // traceable author statement /// 0016442 // RNA-induced silencing complex // inferred from direct assay","0000339 // RNA cap binding // traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0003743 // translation initiation factor activity // inferred from sequence or structural similarity /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0003743 // translation initiation factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr4:99799606-99850243 (-) // 95.42 // q23"]
["11753310_x_at",186.04077,199.57307,175.0458,181.37405,186.17511,188.34468,-5.21183E-4,0.10077667,-0.08840752,-0.03717184,5.207062E-4,0.01723528,0.9554523,0.86377186,1.0072496,0.010421223,1.0072496,"up","NARF",26502.0,"","0005634 // nucleus // inferred from electronic annotation /// 0005638 // lamin filament // inferred from direct assay /// 0005652 // nuclear lamina // traceable author statement /// 0031981 // nuclear lumen // inferred from direct assay","0005521 // lamin binding // inferred from physical interaction","chr17:80416539-80441692 (+) // 86.38 // q25.3"]
["11722843_a_at",145.87682,138.99042,148.32019,134.2274,124.47178,123.28636,0.09491825,0.02515316,0.11888313,-0.02515316,-0.13401318,-0.14781857,0.2534453,0.019129038,1.1344396,0.18197978,1.1344396,"up","ENAH",55740.0,"0001843 // neural tube closure // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007411 // axon guidance // inferred from electronic annotation /// 0008154 // actin polymerization or depolymerization // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0046907 // intracellular transport // inferred from electronic annotation /// 0050852 // T cell receptor signaling pathway // traceable author statement","0001725 // stress fiber // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005925 // focal adhesion // inferred from direct assay /// 0005925 // focal adhesion // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030054 // cell junction // inferred from direct assay /// 0030054 // cell junction // inferred from electronic annotation /// 0030175 // filopodium // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0050699 // WW domain binding // inferred from physical interaction","chr1:225674530-225840816 (-) // 85.53 // q42.12"]
["11720884_a_at",316.62704,327.31503,310.03476,329.9004,314.20737,343.87405,-0.023947716,0.023947716,-0.054302216,0.035298347,-0.035015106,0.09514809,0.68554646,0.31976902,-1.0352012,-0.049911182,1.0352012,"down","HMBS",3145.0,"0001666 // response to hypoxia // inferred from electronic annotation /// 0006778 // porphyrin-containing compound metabolic process // traceable author statement /// 0006779 // porphyrin-containing compound biosynthetic process // inferred from electronic annotation /// 0006782 // protoporphyrinogen IX biosynthetic process // inferred from electronic annotation /// 0006783 // heme biosynthetic process // inferred by curator /// 0006783 // heme biosynthetic process // traceable author statement /// 0006783 // heme biosynthetic process // inferred from electronic annotation /// 0009725 // response to hormone stimulus // inferred from electronic annotation /// 0009743 // response to carbohydrate stimulus // inferred from electronic annotation /// 0010038 // response to metal ion // inferred from electronic annotation /// 0010043 // response to zinc ion // inferred from electronic annotation /// 0010288 // response to lead ion // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0018160 // peptidyl-pyrromethane cofactor linkage // inferred from electronic annotation /// 0031100 // organ regeneration // inferred from electronic annotation /// 0031667 // response to nutrient levels // inferred from electronic annotation /// 0032025 // response to cobalt ion // inferred from electronic annotation /// 0032355 // response to estradiol stimulus // inferred from electronic annotation /// 0033014 // tetrapyrrole biosynthetic process // inferred from electronic annotation /// 0033273 // response to vitamin // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0043200 // response to amino acid stimulus // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0048708 // astrocyte differentiation // inferred from electronic annotation /// 0051597 // response to methylmercury // inferred from electronic annotation /// 0071236 // cellular response to antibiotic // inferred from electronic annotation /// 0071243 // cellular response to arsenic-containing substance // inferred from electronic annotation /// 0071284 // cellular response to lead ion // inferred from electronic annotation /// 0071345 // cellular response to cytokine stimulus // inferred from electronic annotation /// 0071418 // cellular response to amine stimulus // inferred from electronic annotation /// 0071549 // cellular response to dexamethasone stimulus // inferred from electronic annotation","0000793 // condensed chromosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0030424 // axon // inferred from electronic annotation","0004418 // hydroxymethylbilane synthase activity // inferred from direct assay /// 0004418 // hydroxymethylbilane synthase activity // inferred from electronic annotation /// 0004418 // hydroxymethylbilane synthase activity // traceable author statement /// 0004852 // uroporphyrinogen-III synthase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0031406 // carboxylic acid binding // inferred from electronic annotation /// 0043176 // amine binding // inferred from electronic annotation /// 0050662 // coenzyme binding // inferred from electronic annotation","chr11:118958696-118964259 (+) // 98.26 // q23.3"]
["11719763_a_at",228.6289,226.33362,242.48985,237.05228,231.8147,231.8147,-0.019963741,-0.034521103,0.06495237,0.032233715,0.0,0.0,0.94576883,0.83589566,-1.0050417,-0.0072553875,1.0050417,"down","VPS13C",54832.0,"0008104 // protein localization // inferred from electronic annotation","","","chr15:62144597-62352647 (-) // 97.01 // q22.2"]
["11723921_at",8.460059,8.7121725,9.57283,9.947963,8.021845,9.925756,-0.11032128,-0.06795645,0.067956686,0.12341213,-0.18705511,0.120188236,0.87355036,0.6570342,-1.0393071,-0.055622038,1.0393071,"down","BBS5 /// KBTBD10","10324 /// 129880","0001947 // heart looping // inferred from sequence or structural similarity /// 0006941 // striated muscle contraction // traceable author statement /// 0007601 // visual perception // inferred from electronic annotation /// 0009296 // flagellum assembly // inferred from sequence or structural similarity /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0031275 // regulation of lateral pseudopodium assembly // inferred from electronic annotation /// 0032402 // melanosome transport // inferred from sequence or structural similarity /// 0042384 // cilium assembly // inferred from mutant phenotype /// 0050896 // response to stimulus // inferred from electronic annotation","0001726 // ruffle // inferred from electronic annotation /// 0005622 // intracellular // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0005932 // microtubule basal body // inferred from sequence or structural similarity /// 0005932 // microtubule basal body // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031143 // pseudopodium // inferred from electronic annotation /// 0034464 // BBSome // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation /// 0060170 // cilium membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0032266 // phosphatidylinositol-3-phosphate binding // inferred from direct assay","chr2:170366045-170382768 (+) // 98.61 // q31.1"]
["11719179_a_at",201.86221,192.00551,189.58249,183.18385,177.53035,188.67047,0.09402323,0.021800041,0.003478527,-0.046055317,-0.09128189,-0.003478527,0.42865884,0.0818603,1.0619427,0.086705916,1.0619427,"up","PVR",5817.0,"0002860 // positive regulation of natural killer cell mediated cytotoxicity directed against tumor cell target // inferred from mutant phenotype /// 0007155 // cell adhesion // inferred from electronic annotation /// 0034329 // cell junction assembly // traceable author statement /// 0034332 // adherens junction organization // traceable author statement /// 0042271 // susceptibility to natural killer cell mediated cytotoxicity // inferred from mutant phenotype /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045216 // cell-cell junction organization // traceable author statement /// 0045954 // positive regulation of natural killer cell mediated cytotoxicity // inferred from mutant phenotype /// 0050776 // regulation of immune response // traceable author statement /// 0060370 // susceptibility to T cell mediated cytotoxicity // inferred from direct assay","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0030054 // cell junction // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0004872 // receptor activity // inferred from electronic annotation /// 0004872 // receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0050839 // cell adhesion molecule binding // inferred from physical interaction","chr19:45147097-45169429 (+) // 53.67 // q13.31"]
["11763627_a_at",674.6801,655.9521,649.8138,643.04987,611.40533,646.1404,0.05826664,0.017653465,0.0040893555,-0.011006355,-0.083807945,-0.0040893555,0.49152288,0.1199676,1.042204,0.059637725,1.042204,"up","MRPL12 /// SLC25A10","1468 /// 6182","0000096 // sulfur amino acid metabolic process // traceable author statement /// 0000098 // sulfur amino acid catabolic process // traceable author statement /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006094 // gluconeogenesis // traceable author statement /// 0006390 // transcription from mitochondrial promoter // inferred from direct assay /// 0006412 // translation // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006817 // phosphate ion transport // inferred from electronic annotation /// 0006835 // dicarboxylic acid transport // traceable author statement /// 0006839 // mitochondrial transport // inferred from electronic annotation /// 0008272 // sulfate transport // inferred from electronic annotation /// 0015709 // thiosulfate transport // inferred from electronic annotation /// 0015743 // malate transport // inferred from electronic annotation /// 0015744 // succinate transport // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0035435 // phosphate ion transmembrane transport // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0055085 // transmembrane transport // traceable author statement /// 0070221 // sulfide oxidation, using sulfide:quinone oxidoreductase // traceable author statement /// 0071422 // succinate transmembrane transport // inferred from electronic annotation /// 0071423 // malate transmembrane transport // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005762 // mitochondrial large ribosomal subunit // inferred from direct assay /// 0005762 // mitochondrial large ribosomal subunit // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation","0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // traceable author statement /// 0005310 // dicarboxylic acid transmembrane transporter activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0015114 // phosphate ion transmembrane transporter activity // inferred from electronic annotation /// 0015116 // sulfate transmembrane transporter activity // inferred from electronic annotation /// 0015117 // thiosulfate transmembrane transporter activity // inferred from electronic annotation /// 0015140 // malate transmembrane transporter activity // inferred from electronic annotation /// 0015141 // succinate transmembrane transporter activity // inferred from electronic annotation /// 0015291 // secondary active transmembrane transporter activity // inferred from electronic annotation /// 0015297 // antiporter activity // inferred from electronic annotation","chr17:79670529-79671450 (+) // 100.0 // q25.3"]
["11749748_x_at",479.48096,470.26584,500.9981,478.61612,478.14053,474.59668,0.0033216476,-0.02467537,0.06665325,7.171631E-4,-7.171631E-4,-0.011449814,0.8121957,0.52628565,1.0131983,0.018916499,1.0131983,"up","SNW1",22938.0,"0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred from direct assay /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0007219 // Notch signaling pathway // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0048384 // retinoic acid receptor signaling pathway // inferred from direct assay /// 0050769 // positive regulation of neurogenesis // inferred from sequence or structural similarity /// 0071300 // cellular response to retinoic acid // inferred from direct assay","0000785 // chromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from direct assay /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0044428 // nuclear part // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay","0005112 // Notch binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0035257 // nuclear hormone receptor binding // inferred from direct assay","chr14:78184003-78227483 (-) // 99.54 // q24.3"]
["11760379_s_at",31.280066,33.90463,40.065548,36.363705,34.28978,30.5975,-0.12438679,-0.008148193,0.23273182,0.092868805,0.008148193,-0.15621662,0.8948447,0.7066027,1.0365566,0.051798895,1.0365566,"up","GTPBP6",8225.0,"","","0000166 // nucleotide binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0005525 // GTP binding // traceable author statement","chrX:228554-230887 (-) // 57.35 // p22.33 /// chrY:178554-180887 (-) // 57.35 // p11.32"]
["11748238_a_at",65.002716,64.84913,72.29735,58.18243,55.01991,60.088085,0.058416843,0.05500412,0.2118597,-0.10149956,-0.18212938,-0.055004597,0.28134462,0.025456516,1.1657875,0.22130479,1.1657875,"up","TBCD",6904.0,"0006457 // protein folding // inferred from direct assay /// 0006457 // protein folding // traceable author statement /// 0007023 // post-chaperonin tubulin folding pathway // inferred from direct assay /// 0010812 // negative regulation of cell-substrate adhesion // inferred from sequence or structural similarity /// 0031115 // negative regulation of microtubule polymerization // inferred from direct assay /// 0034333 // adherens junction assembly // inferred from sequence or structural similarity /// 0043547 // positive regulation of GTPase activity // inferred from direct assay /// 0043547 // positive regulation of GTPase activity // inferred from mutant phenotype /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement /// 0070830 // tight junction assembly // inferred from sequence or structural similarity","0005737 // cytoplasm // inferred from electronic annotation /// 0005874 // microtubule // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005912 // adherens junction // inferred from sequence or structural similarity /// 0005912 // adherens junction // inferred from electronic annotation /// 0005923 // tight junction // inferred from sequence or structural similarity /// 0005923 // tight junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016328 // lateral plasma membrane // inferred from sequence or structural similarity /// 0016328 // lateral plasma membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","0005096 // GTPase activator activity // inferred from direct assay /// 0005096 // GTPase activator activity // inferred from mutant phenotype /// 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0048487 // beta-tubulin binding // inferred from direct assay /// 0051087 // chaperone binding // traceable author statement","chr17:80709954-80887376 (+) // 98.65 // q25.3"]
["11726012_a_at",94.68459,87.73253,90.580055,77.53395,87.99314,80.55185,0.10787821,-0.0021395683,0.043941975,-0.18042278,0.0021395683,-0.12533331,0.41427723,0.07378907,1.1104151,0.15109909,1.1104151,"up","AJUBA",84962.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0016339 // calcium-dependent cell-cell adhesion // inferred from electronic annotation /// 0030032 // lamellipodium assembly // inferred from electronic annotation /// 0030334 // regulation of cell migration // inferred from electronic annotation /// 0031047 // gene silencing by RNA // inferred from electronic annotation /// 0031328 // positive regulation of cellular biosynthetic process // inferred from electronic annotation /// 0031334 // positive regulation of protein complex assembly // inferred from direct assay /// 0033673 // negative regulation of kinase activity // inferred from electronic annotation /// 0033674 // positive regulation of kinase activity // inferred from electronic annotation /// 0034613 // cellular protein localization // inferred from electronic annotation /// 0035195 // gene silencing by miRNA // inferred from mutant phenotype /// 0035313 // wound healing, spreading of epidermal cells // inferred from electronic annotation /// 0035331 // negative regulation of hippo signaling cascade // inferred from direct assay /// 0043087 // regulation of GTPase activity // inferred from electronic annotation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from electronic annotation /// 0043406 // positive regulation of MAP kinase activity // inferred from electronic annotation /// 0046474 // glycerophospholipid biosynthetic process // inferred from electronic annotation /// 0048041 // focal adhesion assembly // inferred from electronic annotation /// 1900037 // regulation of cellular response to hypoxia // inferred from direct assay /// 2000637 // positive regulation of gene silencing by miRNA // inferred from mutant phenotype","0000932 // cytoplasmic mRNA processing body // inferred from direct assay /// 0000932 // cytoplasmic mRNA processing body // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from direct assay /// 0005911 // cell-cell junction // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","0003682 // chromatin binding // inferred from electronic annotation /// 0003714 // transcription corepressor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0045294 // alpha-catenin binding // inferred from direct assay /// 0045294 // alpha-catenin binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051015 // actin filament binding // inferred from electronic annotation","chr14:23440385-23451848 (-) // 94.87 // q11.2"]
["11751864_x_at",16.085804,16.077055,17.12244,15.038661,18.733984,15.866796,3.9243698E-4,-3.9243698E-4,0.090492725,-0.09671974,0.22026205,-0.019384861,0.9896222,0.9658783,-1.0031623,-0.0045549856,1.0031623,"down","PLAG1",5324.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0010629 // negative regulation of gene expression // inferred from electronic annotation /// 0022612 // gland morphogenesis // inferred from electronic annotation /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0035265 // organ growth // inferred from electronic annotation /// 0060252 // positive regulation of glial cell proliferation // inferred from electronic annotation /// 0060736 // prostate gland growth // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:57080871-57092074 (-) // 58.7 // q12.1"]
["11729827_at",7.122417,6.9345407,6.865531,6.79464,7.7061086,8.078359,0.019283295,-0.019283295,-0.033712387,-0.048686504,0.13291907,0.20097876,0.61975574,0.23533265,-1.0764699,-0.106307976,1.0764699,"down","FAM110B",90362.0,"","0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation","","chr8:58907112-59062280 (+) // 97.12 // q12.1"]
["11721772_at",94.677734,93.31499,107.491714,108.92857,106.82078,114.733894,-0.17861176,-0.19952822,0.0045166016,0.023673534,-0.0045166016,0.09858322,0.4330421,0.08450429,-1.1202245,-0.16378786,1.1202245,"down","INO80D",54891.0,"0006281 // DNA repair // inferred from electronic annotation /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr2:206858444-206950906 (-) // 97.55 // q33.3"]
["11727101_at",163.3754,166.74165,168.08868,153.36395,158.74464,158.2746,0.020741463,0.050165176,0.0617733,-0.07048988,-0.020741463,-0.025019646,0.22748236,0.014423541,1.0592015,0.08297704,1.0592015,"up","IGF2BP1",10642.0,"0006403 // RNA localization // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0010610 // regulation of mRNA stability involved in response to stress // inferred from mutant phenotype /// 0017148 // negative regulation of translation // inferred from direct assay /// 0042035 // regulation of cytokine biosynthetic process // inferred by curator /// 0070934 // CRD-mediated mRNA stabilization // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0010494 // cytoplasmic stress granule // inferred from direct assay /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0070937 // CRD-mediated mRNA stability complex // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003729 // mRNA binding // inferred from direct assay /// 0003730 // mRNA 3'-UTR binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0045182 // translation regulator activity // inferred from direct assay /// 0048027 // mRNA 5'-UTR binding // inferred from direct assay","chr17:47074773-47133505 (+) // 98.95 // q21.32"]
["11756823_x_at",248.72987,258.10342,258.07205,234.2401,237.08197,230.6572,0.034597397,0.08796692,0.08779144,-0.0519948,-0.03459692,-0.0742321,0.14570753,0.004253815,1.0895456,0.123726584,1.0895456,"up","CENPL",91687.0,"0000087 // M phase of mitotic cell cycle // traceable author statement /// 0000236 // mitotic prometaphase // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","","chr1:173768719-173793158 (-) // 82.73 // q25.1"]
["11718671_a_at",372.02853,358.89313,366.43903,393.3737,364.81003,369.13327,0.016555786,-0.035303116,-0.0052843094,0.09704304,-0.011712074,0.0052843094,0.7137124,0.35969234,-1.0268431,-0.038215715,1.0268431,"down","C11orf49",79096.0,"","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay","","chr11:46958117-47183798 (+) // 93.04 // p11.2"]
["11758899_at",10.851293,10.646255,10.095405,12.119539,10.453392,9.734952,0.040708542,0.013187647,-0.063459635,0.20017648,-0.013187408,-0.115912676,0.932181,0.79778796,-1.0188065,-0.02688001,1.0188065,"down","","","","","","chr20:2844840-3021815 (+) // 93.6 // p13"]
["11762769_x_at",6.3512573,6.4218063,6.4301043,6.1799755,6.72858,6.6096597,-0.016868353,-9.315014E-4,9.315014E-4,-0.05630946,0.06639147,0.040665388,0.8387683,0.5829419,-1.0157453,-0.022538664,1.0157453,"down","ZNF215",7762.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016032 // viral reproduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0008270 // zinc ion binding // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:6953416-6977013 (+) // 62.35 // p15.4"]
["11747654_a_at",7.859015,6.1992254,5.965174,6.1913366,6.7057767,6.6715617,0.28929234,-0.052968264,-0.1084919,-0.05480528,0.060348272,0.052968264,0.95687973,0.86738586,1.0161455,0.023106948,1.0161455,"up","SGK2",10110.0,"0001558 // regulation of cell growth // traceable author statement /// 0006468 // protein phosphorylation // non-traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0006979 // response to oxidative stress // traceable author statement /// 0007243 // intracellular protein kinase cascade // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0032411 // positive regulation of transporter activity // traceable author statement /// 0042127 // regulation of cell proliferation // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0015459 // potassium channel regulator activity // inferred from direct assay /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0017080 // sodium channel regulator activity // non-traceable author statement /// 0017080 // sodium channel regulator activity // traceable author statement","chr20:42193425-42214266 (+) // 76.71 // q13.12"]
["11720808_a_at",473.20767,503.42487,519.1728,481.37247,462.272,481.04102,-0.024183273,0.06511974,0.109558105,4.968643E-4,-0.057914734,-4.968643E-4,0.57366854,0.1879817,1.049331,0.069469765,1.049331,"up","RABEPK",10244.0,"0006898 // receptor-mediated endocytosis // traceable author statement /// 0006904 // vesicle docking involved in exocytosis // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // traceable author statement /// 0005768 // endosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","","chr9:127962861-127996437 (+) // 92.46 // q33.3"]
["11736355_at",65.77322,68.33998,69.44531,64.03595,62.154957,62.149593,0.019309044,0.07453871,0.09768629,-0.019309044,-0.062321663,-0.062446117,0.23126076,0.014925788,1.0806283,0.11187033,1.0806283,"up","MDN1",23195.0,"0006200 // ATP catabolic process // non-traceable author statement /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006461 // protein complex assembly // non-traceable author statement /// 0006461 // protein complex assembly // inferred from electronic annotation","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016887 // ATPase activity // non-traceable author statement /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0051082 // unfolded protein binding // non-traceable author statement","chr6:90352217-90529513 (-) // 99.47 // q15"]
["11763904_x_at",6.6414037,7.0025096,6.7265677,7.4873724,7.566263,6.6697483,-0.04738307,0.02900076,-0.02900076,0.12558818,0.14070964,-0.041239023,0.60684246,0.22091953,-1.0649709,-0.09081394,1.0649709,"down","SNORA50",677830.0,"","","","chr16:58593542-58593835 (-) // 97.67 // q21"]
["11749430_a_at",317.81958,309.68634,316.783,283.1476,291.80908,289.24637,0.08029175,0.042891502,0.07557869,-0.086361885,-0.042891502,-0.055617332,0.11081357,0.0018486758,1.092685,0.12787753,1.092685,"up","LOC100506538 /// NDUFAF6","100506538 /// 137682","0009058 // biosynthetic process // inferred from electronic annotation /// 0032981 // mitochondrial respiratory chain complex I assembly // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from direct assay /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0016740 // transferase activity // inferred from electronic annotation","chr8:96037260-96089041 (+) // 80.14 // q22.1"]
["11730322_a_at",6.9236727,7.516693,6.396551,7.3706827,6.536437,6.264293,0.041516542,0.1600771,-0.07272673,0.13177729,-0.041516542,-0.10286927,0.8714067,0.65302134,1.0332279,0.047158536,1.0332279,"up","CLEC2D",29121.0,"0007166 // cell surface receptor signaling pathway // traceable author statement","0005624 // membrane fraction // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // traceable author statement /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr12:9822307-9852039 (+) // 41.01 // p13.31"]
["11751495_x_at",328.7049,323.14346,331.25394,343.59344,359.1917,350.44885,-0.037527084,-0.062145233,-0.026382446,0.026382446,0.090434074,0.054883957,0.19403103,0.009635755,-1.0712178,-0.09925181,1.0712178,"down","YAF2",10138.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","0003713 // transcription coactivator activity // inferred from direct assay /// 0003714 // transcription corepressor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:42553703-42632089 (-) // 91.52 // q12"]
["11724111_x_at",61.18885,61.979618,60.78056,62.411022,61.614746,62.86516,-0.014266014,0.0042591095,-0.023925304,0.014266014,-0.0042591095,0.024725914,0.49875283,0.12537469,-1.0159914,-0.02288826,1.0159914,"down","ARHGAP4",393.0,"0006915 // apoptotic process // traceable author statement /// 0007010 // cytoskeleton organization // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007266 // Rho protein signal transduction // traceable author statement /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0032321 // positive regulation of Rho GTPase activity // traceable author statement /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005925 // focal adhesion // inferred from direct assay","0005070 // SH3/SH2 adaptor activity // traceable author statement /// 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005100 // Rho GTPase activator activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chrX:153172831-153191697 (-) // 97.06 // q28"]
["11759434_at",9.462334,10.420435,9.66549,10.50045,10.55791,9.8535795,-0.098799944,0.040347815,-0.068152905,0.051383257,0.059256792,-0.040347815,0.65737736,0.28292713,-1.0465436,-0.06563241,1.0465436,"down","IL12RB1",3594.0,"0001916 // positive regulation of T cell mediated cytotoxicity // inferred from sequence or structural similarity /// 0002230 // positive regulation of defense response to virus by host // inferred from direct assay /// 0002230 // positive regulation of defense response to virus by host // inferred from sequence or structural similarity /// 0002827 // positive regulation of T-helper 1 type immune response // inferred from direct assay /// 0002827 // positive regulation of T-helper 1 type immune response // inferred from sequence or structural similarity /// 0007165 // signal transduction // inferred by curator /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // inferred from electronic annotation /// 0032729 // positive regulation of interferon-gamma production // inferred from direct assay /// 0032729 // positive regulation of interferon-gamma production // inferred from mutant phenotype /// 0035722 // interleukin-12-mediated signaling pathway // inferred from direct assay /// 0038155 // interleukin-23-mediated signaling pathway // inferred from direct assay /// 0042104 // positive regulation of activated T cell proliferation // inferred from direct assay /// 0043382 // positive regulation of memory T cell differentiation // inferred from sequence or structural similarity /// 0071346 // cellular response to interferon-gamma // inferred from direct assay /// 2000318 // positive regulation of T-helper 17 type immune response // inferred from sequence or structural similarity /// 2000330 // positive regulation of T-helper 17 cell lineage commitment // inferred from sequence or structural similarity","0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0042022 // interleukin-12 receptor complex // inferred from direct assay /// 0072536 // interleukin-23 receptor complex // inferred from direct assay","0004872 // receptor activity // inferred from electronic annotation /// 0004896 // cytokine receptor activity // traceable author statement /// 0004896 // cytokine receptor activity // inferred from electronic annotation /// 0005143 // interleukin-12 receptor binding // inferred from physical interaction /// 0016517 // interleukin-12 receptor activity // inferred from direct assay /// 0019955 // cytokine binding // inferred from electronic annotation /// 0042019 // interleukin-23 binding // inferred from physical interaction /// 0042020 // interleukin-23 receptor activity // inferred from direct assay","chr19:18169804-18197743 (-) // 88.14 // p13.11"]
["11762372_at",32.168293,34.52491,39.481968,33.87566,50.173187,32.521614,-0.08830404,0.013694286,0.2072506,-0.013694286,0.5529733,-0.072544575,0.86323994,0.6355243,-1.0802494,-0.11136447,1.0802494,"down","GSN-AS1",57000.0,"","","","chr9:124043045-124047808 (-) // 61.07 // q33.2"]
["11754484_a_at",153.96942,146.30032,152.36171,144.49342,145.14948,143.35675,0.07940769,0.0056967735,0.0642643,-0.012231827,-0.0056967735,-0.023626328,0.36302203,0.05097268,1.0451002,0.06364129,1.0451002,"up","COPS7B",64708.0,"0010388 // cullin deneddylation // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0008180 // signalosome // inferred from direct assay /// 0008180 // signalosome // inferred from electronic annotation","","chr2:232654109-232673433 (+) // 79.55 // q37.1"]
["11730661_a_at",42.360153,38.875744,42.141926,39.588634,38.70569,42.551582,0.052536488,-0.07130098,0.045084953,-0.045084953,-0.07762575,0.0590415,0.8606299,0.62945706,1.0210097,0.02999655,1.0210097,"up","CCDC78",124093.0,"","","","chr16:772581-776473 (-) // 94.16 // p13.3"]
["11739735_a_at",8.700015,8.37363,7.1491933,7.3104806,8.055157,8.188716,0.099242926,0.04407811,-0.18399453,-0.15180874,-0.011862278,0.011862278,0.90546197,0.73139036,1.0260102,0.03704501,1.0260102,"up","PCDH19",57526.0,"0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chrX:99546642-99665271 (-) // 98.49 // q22.1"]
["11753149_a_at",7.776933,7.218604,6.59704,7.1710176,7.3598084,7.790021,0.09350729,-0.01397419,-0.14387512,-0.023516178,0.01397419,0.0959332,0.8243164,0.55045503,-1.0354403,-0.05024441,1.0354403,"down","CELF2",10659.0,"0006376 // mRNA splice site selection // inferred from electronic annotation /// 0006396 // RNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008016 // regulation of heart contraction // traceable author statement","0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement","chr10:11206928-11330511 (+) // 99.74 // p14"]
["11754751_x_at",1448.0503,1433.3737,1438.2673,1616.7086,1530.4028,1635.5607,-0.039899826,-0.0545969,-0.049679756,0.11904812,0.039899826,0.13577366,0.18092036,0.0080668405,-1.106727,-0.14629939,1.106727,"down","BAG1",573.0,"0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from electronic annotation /// 0006916 // anti-apoptosis // traceable author statement /// 0006950 // response to stress // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0010226 // response to lithium ion // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0035094 // response to nicotine // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043525 // positive regulation of neuron apoptotic process // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0070389 // chaperone cofactor-dependent protein refolding // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0045111 // intermediate filament cytoskeleton // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005057 // receptor signaling protein activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0051087 // chaperone binding // inferred from electronic annotation /// 0051219 // phosphoprotein binding // inferred from electronic annotation","chr9:33255022-33260439 (-) // 65.88 // p13.3"]
["11762966_x_at",61.056767,61.022106,53.767338,58.58744,65.479065,58.48985,0.030189514,0.029370308,-0.15323162,-0.029370308,0.13107157,-0.031774998,0.81861466,0.5395669,-1.0385226,-0.054532614,1.0385226,"down","OBP2B",29989.0,"0006810 // transport // inferred from electronic annotation /// 0007606 // sensory perception of chemical stimulus // traceable author statement /// 0007608 // sensory perception of smell // non-traceable author statement /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0007635 // chemosensory behavior // traceable author statement /// 0050896 // response to stimulus // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","0005549 // odorant binding // non-traceable author statement","chr9:138438000-138441792 (+) // 96.83 // q34.3 /// chr9:136080688-136084612 (-) // 99.78 // q34.2"]
["11748353_a_at",58.253048,51.697098,56.566257,56.363956,64.67731,51.58448,0.044976234,-0.12727404,0.0025844574,-0.0025844574,0.19590187,-0.13042021,0.88473874,0.6829836,-1.0334989,-0.047536828,1.0334989,"down","TMCC2",9911.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr1:205198058-205241431 (+) // 96.88 // q32.1"]
["11727093_s_at",1535.6958,1505.2129,1731.0034,1453.3737,1577.4357,1499.005,0.014462471,-0.014462471,0.18717861,-0.065024376,0.05315113,-0.020424843,0.71702653,0.3656215,1.0520177,0.073158965,1.0520177,"up","UBE2V2",7336.0,"0000209 // protein polyubiquitination // traceable author statement /// 0000729 // DNA double-strand break processing // inferred from mutant phenotype /// 0006282 // regulation of DNA repair // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0010976 // positive regulation of neuron projection development // inferred from electronic annotation /// 0016567 // protein ubiquitination // traceable author statement /// 0032436 // positive regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0045739 // positive regulation of DNA repair // inferred from electronic annotation /// 0051965 // positive regulation of synapse assembly // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0031372 // UBC13-MMS2 complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation","chr8:48920975-48974452 (+) // 98.66 // q11.21"]
["11740110_a_at",21.159624,21.569275,22.099297,21.101643,22.591503,22.388128,-0.045175076,-0.017511368,0.017511368,-0.049133778,0.049291134,0.03624487,0.79283047,0.48980907,-1.0190271,-0.027192438,1.0190271,"down","ATXN7L1",222255.0,"","","","chr7:105399582-105517033 (-) // 62.48 // q22.3"]
["11730095_at",14.076914,11.49389,13.816404,12.337925,13.222114,13.557887,0.07228875,-0.22017527,0.045339823,-0.11794257,-0.018089771,0.01809001,0.98863155,0.962212,1.0035635,0.005131939,1.0035635,"up","KHDC3L",154288.0,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0007094 // mitotic cell cycle spindle assembly checkpoint // inferred from electronic annotation /// 0090307 // spindle assembly involved in mitosis // inferred from electronic annotation","0005938 // cell cortex // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0045179 // apical cortex // inferred from electronic annotation","","chr6:74072399-74073898 (+) // 96.14 // q13"]
["11728967_x_at",39.895336,40.391796,40.452545,37.079334,39.01901,46.9826,-0.008921146,0.008921146,0.011089325,-0.114525795,-0.040964127,0.22698545,0.95241237,0.85586965,-1.0140547,-0.020135414,1.0140547,"down","ZNF468",90333.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:53342042-53360877 (-) // 67.9 // q13.41"]
["11724072_a_at",117.49448,110.58007,114.32715,112.18491,121.07045,119.874,0.019712448,-0.06778908,-0.019712448,-0.04700184,0.06296587,0.048638344,0.7142496,0.36072442,-1.0310615,-0.04413043,1.0310615,"down","ZSWIM3",140831.0,"","","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr20:44486219-44507770 (+) // 99.12 // q13.12"]
["11752095_a_at",6.2410054,7.346948,6.8022056,6.757128,6.1693144,7.0150433,-0.11942792,0.11593866,0.0047962666,-0.0047962666,-0.13609624,0.049245596,0.9096544,0.74102825,1.0217092,0.030984638,1.0217092,"up","PTPRC",5788.0,"0000187 // activation of MAPK activity // inferred from electronic annotation /// 0001915 // negative regulation of T cell mediated cytotoxicity // inferred from sequence or structural similarity /// 0001916 // positive regulation of T cell mediated cytotoxicity // inferred from electronic annotation /// 0001960 // negative regulation of cytokine-mediated signaling pathway // inferred from sequence or structural similarity /// 0002244 // hemopoietic progenitor cell differentiation // inferred from mutant phenotype /// 0002378 // immunoglobulin biosynthetic process // inferred from mutant phenotype /// 0002711 // positive regulation of T cell mediated immunity // inferred from electronic annotation /// 0002923 // regulation of humoral immune response mediated by circulating immunoglobulin // inferred from electronic annotation /// 0002925 // positive regulation of humoral immune response mediated by circulating immunoglobulin // inferred from electronic annotation /// 0006469 // negative regulation of protein kinase activity // inferred from direct assay /// 0006469 // negative regulation of protein kinase activity // inferred from sequence or structural similarity /// 0006470 // protein dephosphorylation // inferred from sequence or structural similarity /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0006933 // negative regulation of cell adhesion involved in substrate-bound cell migration // inferred from mutant phenotype /// 0007159 // leukocyte cell-cell adhesion // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0010332 // response to gamma radiation // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from sequence or structural similarity /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0030183 // B cell differentiation // inferred from electronic annotation /// 0030217 // T cell differentiation // inferred from sequence or structural similarity /// 0030890 // positive regulation of B cell proliferation // inferred from mutant phenotype /// 0030890 // positive regulation of B cell proliferation // inferred from electronic annotation /// 0031953 // negative regulation of protein autophosphorylation // inferred from electronic annotation /// 0033261 // regulation of S phase // inferred from mutant phenotype /// 0034113 // heterotypic cell-cell adhesion // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from direct assay /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation /// 0042098 // T cell proliferation // inferred from electronic annotation /// 0042100 // B cell proliferation // inferred from sequence or structural similarity /// 0042102 // positive regulation of T cell proliferation // inferred from sequence or structural similarity /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043410 // positive regulation of MAPK cascade // inferred from electronic annotation /// 0045059 // positive thymic T cell selection // inferred from electronic annotation /// 0045060 // negative thymic T cell selection // inferred from electronic annotation /// 0045577 // regulation of B cell differentiation // inferred from electronic annotation /// 0045582 // positive regulation of T cell differentiation // inferred from electronic annotation /// 0045588 // positive regulation of gamma-delta T cell differentiation // inferred from electronic annotation /// 0045860 // positive regulation of protein kinase activity // non-traceable author statement /// 0046641 // positive regulation of alpha-beta T cell proliferation // inferred from electronic annotation /// 0048304 // positive regulation of isotype switching to IgG isotypes // inferred from electronic annotation /// 0048539 // bone marrow development // inferred from mutant phenotype /// 0048864 // stem cell development // inferred from mutant phenotype /// 0050732 // negative regulation of peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0050852 // T cell receptor signaling pathway // inferred from direct assay /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0050852 // T cell receptor signaling pathway // inferred from electronic annotation /// 0050853 // B cell receptor signaling pathway // inferred from sequence or structural similarity /// 0050853 // B cell receptor signaling pathway // inferred from electronic annotation /// 0050855 // regulation of B cell receptor signaling pathway // inferred from electronic annotation /// 0050857 // positive regulation of antigen receptor-mediated signaling pathway // inferred from sequence or structural similarity /// 0051209 // release of sequestered calcium ion into cytosol // inferred from sequence or structural similarity /// 0051607 // defense response to virus // inferred from sequence or structural similarity /// 0051607 // defense response to virus // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from sequence or structural similarity /// 2000473 // positive regulation of hematopoietic stem cell migration // inferred from mutant phenotype /// 2000648 // positive regulation of stem cell proliferation // inferred from mutant phenotype","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from sequence or structural similarity /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0005925 // focal adhesion // inferred from sequence or structural similarity /// 0009897 // external side of plasma membrane // inferred from direct assay /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0045121 // membrane raft // inferred from electronic annotation /// 0071944 // cell periphery // inferred from electronic annotation","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from direct assay /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005001 // transmembrane receptor protein tyrosine phosphatase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008201 // heparin binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0043395 // heparan sulfate proteoglycan binding // inferred from electronic annotation","chr1:198608224-198719756 (+) // 96.38 // q31.3"]
["11758177_x_at",136.78517,146.7073,155.88841,134.88644,133.87299,132.23427,0.010083199,0.11111212,0.19868517,-0.010083199,-0.020963669,-0.038733006,0.42203677,0.07799054,1.0942079,0.12988685,1.0942079,"up","LRWD1 /// MIR4467","100616367 /// 222229","0000080 // G1 phase of mitotic cell cycle // inferred from mutant phenotype /// 0006260 // DNA replication // inferred from electronic annotation /// 0006270 // DNA-dependent DNA replication initiation // traceable author statement /// 0006325 // chromatin organization // inferred from mutant phenotype /// 0016568 // chromatin modification // inferred from electronic annotation /// 0071169 // establishment of protein localization to chromatin // inferred from direct assay","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000781 // chromosome, telomeric region // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005664 // nuclear origin of replication recognition complex // inferred from direct assay /// 0005694 // chromosome // inferred from electronic annotation /// 0005721 // centromeric heterochromatin // inferred from direct assay /// 0031933 // telomeric heterochromatin // inferred from direct assay","0003682 // chromatin binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008327 // methyl-CpG binding // inferred from direct assay /// 0035064 // methylated histone residue binding // inferred from direct assay","chr7:102113157-102113597 (+) // 92.24 // q22.1"]
["11729288_at",75.57201,71.874016,76.27375,83.04067,76.831406,82.24165,-0.018588543,-0.090970516,-0.0052547455,0.11737728,0.0052547455,0.103428364,0.38974684,0.061939728,-1.0819432,-0.1136247,1.0819432,"down","MSL3",10943.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0007275 // multicellular organismal development // traceable author statement /// 0016568 // chromatin modification // inferred from electronic annotation /// 0043984 // histone H4-K16 acetylation // inferred from direct assay","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0072487 // MSL complex // inferred from direct assay","0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0035064 // methylated histone residue binding // inferred from direct assay","chrX:11776277-11786410 (+) // 71.57 // p22.2"]
["11755166_a_at",170.05502,172.22862,183.26881,186.36707,180.23714,188.13898,-0.09592676,-0.07760382,0.012032986,0.036218166,-0.012032509,0.049869537,0.4744201,0.10952774,-1.0559325,-0.078517646,1.0559325,"down","ESAM",90952.0,"0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0016337 // cell-cell adhesion // inferred from electronic annotation /// 0050900 // leukocyte migration // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005912 // adherens junction // inferred from electronic annotation /// 0005923 // tight junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","","chr11:124623024-124627433 (-) // 83.1 // q24.2"]
["11721835_s_at",3072.3745,3104.0283,3277.9397,3031.5337,3129.8286,2989.9646,-0.007393837,0.007393837,0.08604145,-0.02670002,0.019335747,-0.04662037,0.63283175,0.2527668,1.032882,0.04667541,1.032882,"up","TMEM14B",81853.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr6:10747994-10757213 (+) // 96.23 // p24.2"]
["11739628_a_at",78.20732,86.424225,94.049034,74.20307,84.33761,77.59204,-0.054436684,0.08969593,0.21167278,-0.13026094,0.054436207,-0.065831184,0.6234553,0.24045767,1.0939367,0.12952924,1.0939367,"up","CSF1",1435.0,"0001503 // ossification // inferred from electronic annotation /// 0001954 // positive regulation of cell-matrix adhesion // inferred from sequence or structural similarity /// 0001954 // positive regulation of cell-matrix adhesion // inferred from electronic annotation /// 0003006 // developmental process involved in reproduction // inferred from sequence or structural similarity /// 0003006 // developmental process involved in reproduction // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from electronic annotation /// 0008283 // cell proliferation // non-traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0010628 // positive regulation of gene expression // inferred from direct assay /// 0010743 // regulation of macrophage derived foam cell differentiation // non-traceable author statement /// 0010744 // positive regulation of macrophage derived foam cell differentiation // inferred from direct assay /// 0030097 // hemopoiesis // non-traceable author statement /// 0030154 // cell differentiation // non-traceable author statement /// 0030225 // macrophage differentiation // traceable author statement /// 0030225 // macrophage differentiation // inferred from electronic annotation /// 0030278 // regulation of ossification // inferred from electronic annotation /// 0030316 // osteoclast differentiation // inferred from direct assay /// 0030335 // positive regulation of cell migration // inferred from sequence or structural similarity /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0032270 // positive regulation of cellular protein metabolic process // inferred from direct assay /// 0032946 // positive regulation of mononuclear cell proliferation // inferred from direct assay /// 0040018 // positive regulation of multicellular organism growth // inferred from electronic annotation /// 0042117 // monocyte activation // non-traceable author statement /// 0042476 // odontogenesis // inferred from electronic annotation /// 0042488 // positive regulation of odontogenesis of dentin-containing tooth // inferred from electronic annotation /// 0045087 // innate immune response // inferred from electronic annotation /// 0045651 // positive regulation of macrophage differentiation // inferred from direct assay /// 0045651 // positive regulation of macrophage differentiation // inferred from electronic annotation /// 0045657 // positive regulation of monocyte differentiation // inferred from sequence or structural similarity /// 0045657 // positive regulation of monocyte differentiation // inferred from electronic annotation /// 0045672 // positive regulation of osteoclast differentiation // inferred from direct assay /// 0045672 // positive regulation of osteoclast differentiation // inferred from electronic annotation /// 0045860 // positive regulation of protein kinase activity // inferred from sequence or structural similarity /// 0045860 // positive regulation of protein kinase activity // inferred from electronic annotation /// 0046579 // positive regulation of Ras protein signal transduction // inferred from electronic annotation /// 0048873 // homeostasis of number of cells within a tissue // inferred from electronic annotation /// 0060444 // branching involved in mammary gland duct morphogenesis // inferred from electronic annotation /// 0060611 // mammary gland fat development // inferred from electronic annotation /// 0060763 // mammary duct terminal end bud growth // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0043235 // receptor complex // inferred from sequence or structural similarity /// 0043235 // receptor complex // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0005125 // cytokine activity // inferred from direct assay /// 0005125 // cytokine activity // inferred from electronic annotation /// 0005157 // macrophage colony-stimulating factor receptor binding // inferred from sequence or structural similarity /// 0005157 // macrophage colony-stimulating factor receptor binding // traceable author statement /// 0005157 // macrophage colony-stimulating factor receptor binding // inferred from electronic annotation /// 0008083 // growth factor activity // inferred from direct assay /// 0008083 // growth factor activity // non-traceable author statement /// 0008083 // growth factor activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from electronic annotation","chr1:110453232-110472656 (+) // 96.98 // p13.3"]
["11741188_a_at",47.153526,47.45476,46.84982,40.977985,40.664066,52.109863,0.004661083,0.013848305,-0.004661083,-0.19785547,-0.20895004,0.14885187,0.7906138,0.4839755,1.0648134,0.090600595,1.0648134,"up","SLC30A6",55676.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // inferred from electronic annotation /// 0006829 // zinc ion transport // inferred from electronic annotation /// 0006895 // Golgi to endosome transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0071577 // zinc ion transmembrane transport // inferred from electronic annotation","0000139 // Golgi membrane // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005385 // zinc ion transmembrane transporter activity // inferred from electronic annotation /// 0008324 // cation transmembrane transporter activity // inferred from electronic annotation","chr2:32390916-32446809 (+) // 85.78 // p22.3"]
["11745010_a_at",176.04788,185.20735,177.47961,196.32048,172.30794,171.23459,-0.0058431625,0.06733084,0.0058431625,0.15140009,-0.036821365,-0.04583645,0.9981676,0.99482495,-1.0003262,-4.704678E-4,1.0003262,"down","DCBLD2",131566.0,"0007155 // cell adhesion // inferred from electronic annotation /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0030522 // intracellular receptor mediated signaling pathway // non-traceable author statement /// 0042060 // wound healing // inferred from direct assay","0005887 // integral to plasma membrane // inferred from direct assay /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr3:98516626-98620034 (-) // 97.36 // q12.1"]
["11734608_x_at",150.05457,148.97775,155.0595,142.68922,148.29567,155.37265,0.005195141,-0.0051956177,0.052529335,-0.06741619,-0.011816025,0.05543995,0.827414,0.55664104,1.0177903,0.02544037,1.0177903,"up","SHQ1",55164.0,"0022618 // ribonucleoprotein complex assembly // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 2000233 // negative regulation of rRNA processing // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0015030 // Cajal body // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr3:72798427-72897599 (-) // 73.2 // p13"]
["11752538_a_at",6.1083446,6.641948,6.3254666,5.498168,6.0497518,5.672021,0.0069527626,0.12777781,0.057343245,-0.14487767,-0.0069527626,-0.09996581,0.36302203,0.05093726,1.1079991,0.14795668,1.1079991,"up","GABRG1",2565.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006821 // chloride transport // inferred from electronic annotation /// 0007214 // gamma-aminobutyric acid signaling pathway // inferred from electronic annotation /// 0007268 // synaptic transmission // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0034707 // chloride channel complex // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004890 // GABA-A receptor activity // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005230 // extracellular ligand-gated ion channel activity // inferred from electronic annotation /// 0005254 // chloride channel activity // inferred from electronic annotation","chr4:46042610-46126082 (-) // 94.54 // p12"]
["11753319_a_at",25.110975,25.736029,20.354048,28.794456,26.568531,25.973713,-0.042102814,-0.0066313744,-0.34510517,0.15537024,0.03929758,0.0066313744,0.547191,0.16380835,-1.1474088,-0.19837955,1.1474088,"down","KCNMB3",27094.0,"0001508 // regulation of action potential // inferred from direct assay /// 0005513 // detection of calcium ion // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006813 // potassium ion transport // inferred from direct assay /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0019228 // regulation of action potential in neuron // inferred from direct assay","0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0008076 // voltage-gated potassium channel complex // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0015269 // calcium-activated potassium channel activity // inferred from direct assay /// 0015269 // calcium-activated potassium channel activity // inferred from electronic annotation /// 0015459 // potassium channel regulator activity // non-traceable author statement /// 0015459 // potassium channel regulator activity // traceable author statement","chr3:178957593-178984790 (-) // 99.9 // q26.32"]
["11736833_a_at",34.637344,40.77242,31.438097,40.614304,36.10902,34.45143,-0.030015469,0.20524979,-0.16982985,0.19964409,0.030015469,-0.037779808,0.87398106,0.65808237,-1.0440266,-0.062158488,1.0440266,"down","ZNF619",285267.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:40518603-40530069 (+) // 97.06 // p22.1"]
["11748543_a_at",706.7076,711.2776,744.8065,927.1022,848.0931,884.0411,-0.16943073,-0.16013145,-0.093678474,0.22218418,0.093678474,0.15356922,0.121009454,0.0025208772,-1.2290618,-0.2975575,1.2290618,"down","TXNIP",10628.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006606 // protein import into nucleus // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0009749 // response to glucose stimulus // inferred from electronic annotation /// 0030216 // keratinocyte differentiation // inferred from direct assay /// 0032355 // response to estradiol stimulus // inferred from electronic annotation /// 0032570 // response to progesterone stimulus // inferred from electronic annotation /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042542 // response to hydrogen peroxide // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043086 // negative regulation of catalytic activity // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from electronic annotation /// 0051592 // response to calcium ion // inferred from electronic annotation /// 0051782 // negative regulation of cell division // inferred from direct assay /// 0071228 // cellular response to tumor cell // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005758 // mitochondrial intermembrane space // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0004857 // enzyme inhibitor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction","chr1:145439346-145441230 (+) // 100.0 // q21.1"]
["11737251_at",6.155205,6.074627,7.6651573,6.426469,6.024536,6.1462173,0.0010540485,-0.017956972,0.31756258,0.06327343,-0.029902697,-0.0010540485,0.78264254,0.47012037,1.0639628,0.08944773,1.0639628,"up","CD226",10666.0,"0001816 // cytokine production // inferred from electronic annotation /// 0002860 // positive regulation of natural killer cell mediated cytotoxicity directed against tumor cell target // inferred from mutant phenotype /// 0002891 // positive regulation of immunoglobulin mediated immune response // inferred from direct assay /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0008037 // cell recognition // traceable author statement /// 0033005 // positive regulation of mast cell activation // inferred from direct assay /// 0045954 // positive regulation of natural killer cell mediated cytotoxicity // inferred from mutant phenotype /// 0050776 // regulation of immune response // traceable author statement /// 0060369 // positive regulation of Fc receptor mediated stimulatory signaling pathway // inferred from direct assay","0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0045121 // membrane raft // traceable author statement","0004872 // receptor activity // inferred from electronic annotation /// 0005178 // integrin binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from physical interaction /// 0050839 // cell adhesion molecule binding // inferred from physical interaction","chr18:67530194-67624232 (-) // 89.61 // q22.2"]
["11749891_a_at",10.854665,11.003473,9.872284,11.07507,10.340893,11.808257,-0.009821892,0.009821892,-0.14668131,0.019178867,-0.07977629,0.11165905,0.7552098,0.42348012,-1.0467482,-0.065914385,1.0467482,"down","HLF",3131.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0007275 // multicellular organismal development // traceable author statement /// 0048511 // rhythmic process // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation","chr17:53343170-53398775 (+) // 94.51 // q22"]
["11737020_x_at",40.252396,46.49596,36.970192,39.456505,39.34101,40.933342,0.014405727,0.22243643,-0.10830641,-0.014405727,-0.018634796,0.038607597,0.89031523,0.69801456,1.0288192,0.040989477,1.0288192,"up","AGAP2",116986.0,"0001934 // positive regulation of protein phosphorylation // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0032312 // regulation of ARF GTPase activity // inferred from electronic annotation /// 0033601 // positive regulation of mammary gland epithelial cell proliferation // inferred from electronic annotation /// 0042177 // negative regulation of protein catabolic process // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from genetic interaction /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0045860 // positive regulation of protein kinase activity // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046427 // positive regulation of JAK-STAT cascade // inferred from electronic annotation /// 0060749 // mammary gland alveolus development // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0008060 // ARF GTPase activator activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0030295 // protein kinase activator activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:58118980-58135984 (-) // 96.98 // q14.1"]
["11746001_x_at",14.158916,15.190259,17.02091,11.8287735,16.502007,13.863692,-0.05071783,0.050717592,0.21487951,-0.3101282,0.17021275,-0.08111715,0.7472909,0.41205174,1.1059636,0.14530389,1.1059636,"up","ZNF252P",286101.0,"","0005622 // intracellular // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation","chr8:146198974-146225155 (-) // 86.83 // q24.3"]
["11762275_x_at",34.64377,34.03681,36.5738,40.282715,37.516644,40.79353,-0.09657478,-0.122074604,-0.018360138,0.12099028,0.018360138,0.1391697,0.277645,0.02452556,-1.1264968,-0.1718432,1.1264968,"down","UQCRB",7381.0,"0006119 // oxidative phosphorylation // traceable author statement /// 0006122 // mitochondrial electron transport, ubiquinol to cytochrome c // inferred from electronic annotation /// 0009060 // aerobic respiration // traceable author statement /// 0022900 // electron transport chain // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // traceable author statement","0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005746 // mitochondrial respiratory chain // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0070469 // respiratory chain // inferred from electronic annotation","0008121 // ubiquinol-cytochrome-c reductase activity // inferred from electronic annotation","chr8:97242942-97247774 (-) // 96.64 // q22.1"]
["11730701_at",50.69733,53.47325,51.188835,57.376656,51.188835,52.70778,-0.035012722,0.041894913,-0.021093369,0.14354086,-0.021093369,0.021093369,0.7332778,0.3912133,-1.0371208,-0.05258397,1.0371208,"down","C11orf49",79096.0,"","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay","","chr11:46958250-47185932 (+) // 98.78 // p11.2"]
["11743503_a_at",317.8933,299.44785,296.10904,275.28662,272.77325,286.22464,0.12690449,0.04066658,0.024490356,-0.080703735,-0.09393597,-0.024490356,0.28743804,0.027066328,1.094595,0.13039711,1.094595,"up","GTF3C2",2976.0,"0006351 // transcription, DNA-dependent // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006383 // transcription from RNA polymerase III promoter // inferred from direct assay /// 0006383 // transcription from RNA polymerase III promoter // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0042791 // 5S class rRNA transcription from RNA polymerase III type 1 promoter // inferred by curator /// 0042797 // tRNA transcription from RNA polymerase III promoter // inferred by curator","0000127 // transcription factor TFIIIC complex // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0003677 // DNA binding // inferred from direct assay","chr2:27548521-27579896 (-) // 93.44 // p23.3"]
["11758812_at",24.111612,29.734941,23.225868,23.04012,23.73386,23.829615,0.019876957,0.32230806,-0.034118652,-0.045702934,-0.0029044151,0.0029044151,0.7080773,0.3516557,1.0851716,0.11792317,1.0851716,"up","SHFM1",7979.0,"0000724 // double-strand break repair via homologous recombination // inferred from electronic annotation /// 0006508 // proteolysis // inferred from direct assay /// 0006508 // proteolysis // inferred from sequence or structural similarity","0000502 // proteasome complex // inferred from direct assay /// 0000502 // proteasome complex // inferred from electronic annotation /// 0000502 // proteasome complex // inferred from sequence or structural similarity /// 0032039 // integrator complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from direct assay /// 0008233 // peptidase activity // inferred from sequence or structural similarity","chr7:96317911-96339202 (-) // 74.7 // q21.3"]
["11742940_s_at",1277.1584,1290.3209,1305.7062,1318.4924,1299.9841,1300.5205,-0.02585411,-0.011061668,0.006038666,0.020097733,-2.975464E-4,2.975464E-4,0.5961833,0.21014996,-1.0118474,-0.016991695,1.0118474,"down","UBE2D3",7323.0,"0000209 // protein polyubiquitination // inferred from direct assay /// 0006281 // DNA repair // inferred from electronic annotation /// 0006464 // cellular protein modification process // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006513 // protein monoubiquitination // inferred from direct assay /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0016567 // protein ubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0030509 // BMP signaling pathway // traceable author statement /// 0032480 // negative regulation of type I interferon production // traceable author statement /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0070936 // protein K48-linked ubiquitination // inferred from direct assay /// 0070979 // protein K11-linked ubiquitination // inferred from direct assay","0005654 // nucleoplasm // traceable author statement /// 0005768 // endosome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0004842 // ubiquitin-protein ligase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation","chr4:103717132-103749105 (-) // 85.58 // q24"]
["11763702_a_at",127.24769,125.87206,143.87404,134.70142,114.70735,115.478004,0.007840633,-0.007840633,0.18500757,0.08996582,-0.14184141,-0.13218069,0.65184444,0.2766601,1.0890131,0.123021305,1.0890131,"up","WDR48",57599.0,"0016579 // protein deubiquitination // inferred from direct assay /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr3:39131058-39138155 (+) // 75.9 // p22.2"]
["11739178_a_at",19.021215,20.558197,18.661005,19.8319,21.017225,19.629908,-0.05282879,0.059275627,-0.080411434,0.007384777,0.09113407,-0.007384777,0.709599,0.354401,-1.0388827,-0.055032812,1.0388827,"down","ISM2",145501.0,"","0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay","","chr14:77940736-77965687 (-) // 89.18 // q24.3"]
["11740300_x_at",46.756786,46.92079,42.179146,45.01192,48.028877,49.046535,-0.0025258064,0.0025258064,-0.15117168,-0.057394505,0.036200523,0.06644964,0.7101972,0.355292,-1.04643,-0.06547579,1.04643,"down","MARCH2",51257.0,"0006897 // endocytosis // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation","0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from direct assay","0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:8478181-8503897 (+) // 87.77 // p13.2"]
["11746150_s_at",173.87411,170.64801,164.88734,178.00334,159.20734,186.37402,0.01350975,-0.01350975,-0.06305313,0.04737091,-0.11362696,0.11366749,0.8621149,0.6319209,-1.0258512,-0.03682155,1.0258512,"down","AGAP9 /// BMS1 /// BMS1P1 /// BMS1P2 /// BMS1P4 /// BMS1P5 /// BMS1P6","399761 /// 414216 /// 642517 /// 642826 /// 728053 /// 729096 /// 9790","0006184 // GTP catabolic process // inferred from electronic annotation /// 0032312 // regulation of ARF GTPase activity // inferred from electronic annotation /// 0042254 // ribosome biogenesis // inferred from electronic annotation /// 0042255 // ribosome assembly // inferred from sequence or structural similarity /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from sequence or structural similarity /// 0005730 // nucleolus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0008060 // ARF GTPase activator activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr10:75461120-75490263 (-) // 77.69 // q22.2"]
["11761672_at",31.148104,27.159227,21.529823,29.137924,27.280106,29.40407,0.1437707,-0.053931236,-0.38903713,0.047524452,-0.047524452,0.060642242,0.7940075,0.49309492,-1.0866947,-0.1199467,1.0866947,"down","SLC16A5",9121.0,"0006810 // transport // inferred from electronic annotation /// 0015711 // organic anion transport // inferred from electronic annotation /// 0015718 // monocarboxylic acid transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008028 // monocarboxylic acid transmembrane transporter activity // traceable author statement /// 0015293 // symporter activity // inferred from electronic annotation /// 0015355 // secondary active monocarboxylate transmembrane transporter activity // inferred from electronic annotation","chr17:73089381-73100505 (+) // 96.42 // q25.1"]
["11733259_s_at",148.50119,148.7062,158.7344,143.02238,137.13051,144.91238,0.01764679,0.019636631,0.113787174,-0.03658724,-0.097278595,-0.01764679,0.39486134,0.064321704,1.0724133,0.10086105,1.0724133,"up","TAOK3",51347.0,"0000165 // MAPK cascade // inferred from mutant phenotype /// 0006281 // DNA repair // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from mutant phenotype /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006469 // negative regulation of protein kinase activity // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from direct assay /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0031572 // G2/M transition DNA damage checkpoint // inferred from mutant phenotype /// 0032874 // positive regulation of stress-activated MAPK cascade // inferred from mutant phenotype /// 0043507 // positive regulation of JUN kinase activity // inferred from mutant phenotype /// 0046329 // negative regulation of JNK cascade // inferred from direct assay /// 0046330 // positive regulation of JNK cascade // inferred from mutant phenotype /// 0046777 // protein autophosphorylation // inferred from direct assay","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004860 // protein kinase inhibitor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr12:118587605-118810750 (-) // 95.99 // q24.23"]
["11762103_a_at",7.794924,9.162512,8.055156,9.162512,8.384353,9.296827,-0.16918612,0.064022064,-0.12180853,0.064022064,-0.064021826,0.08501744,0.66169435,0.28854728,-1.0747467,-0.10399672,1.0747467,"down","ZNF274",10782.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016032 // viral reproduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005730 // nucleolus // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003714 // transcription corepressor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:58694475-58722075 (+) // 81.93 // q13.43"]
["11752248_a_at",44.38799,43.44372,43.049347,41.981636,43.203716,39.727577,0.041595936,0.010574341,-0.0025820732,-0.03881502,0.0025820732,-0.11843252,0.5267349,0.14642571,1.0483239,0.06808449,1.0483239,"up","MET",4233.0,"0000187 // activation of MAPK activity // inferred from electronic annotation /// 0001101 // response to acid // inferred from electronic annotation /// 0001764 // neuron migration // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0001890 // placenta development // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007166 // cell surface receptor signaling pathway // non-traceable author statement /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007420 // brain development // inferred from electronic annotation /// 0007517 // muscle organ development // inferred from electronic annotation /// 0007519 // skeletal muscle tissue development // inferred from electronic annotation /// 0007569 // cell aging // inferred from electronic annotation /// 0007595 // lactation // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0008584 // male gonad development // inferred from electronic annotation /// 0009611 // response to wounding // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0010800 // positive regulation of peptidyl-threonine phosphorylation // inferred from electronic annotation /// 0010801 // negative regulation of peptidyl-threonine phosphorylation // inferred from electronic annotation /// 0010828 // positive regulation of glucose transport // inferred from electronic annotation /// 0010976 // positive regulation of neuron projection development // inferred from electronic annotation /// 0014003 // oligodendrocyte development // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0014812 // muscle cell migration // inferred from electronic annotation /// 0014902 // myotube differentiation // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0021953 // central nervous system neuron differentiation // inferred from electronic annotation /// 0030317 // sperm motility // inferred from electronic annotation /// 0030534 // adult behavior // inferred from electronic annotation /// 0031016 // pancreas development // inferred from electronic annotation /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042593 // glucose homeostasis // inferred from electronic annotation /// 0043434 // response to peptide hormone stimulus // inferred from electronic annotation /// 0045740 // positive regulation of DNA replication // inferred from electronic annotation /// 0045840 // positive regulation of mitosis // inferred from electronic annotation /// 0046777 // protein autophosphorylation // inferred from electronic annotation /// 0048012 // hepatocyte growth factor receptor signaling pathway // traceable author statement /// 0048012 // hepatocyte growth factor receptor signaling pathway // inferred from electronic annotation /// 0048754 // branching morphogenesis of a tube // inferred from mutant phenotype /// 0050775 // positive regulation of dendrite morphogenesis // inferred from electronic annotation /// 0051450 // myoblast proliferation // inferred from electronic annotation /// 0060665 // regulation of branching involved in salivary gland morphogenesis by mesenchymal-epithelial signaling // inferred from electronic annotation /// 0071241 // cellular response to inorganic substance // inferred from electronic annotation /// 0071243 // cellular response to arsenic-containing substance // inferred from electronic annotation /// 0071333 // cellular response to glucose stimulus // inferred from electronic annotation /// 0071354 // cellular response to interleukin-6 // inferred from electronic annotation /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation /// 0071375 // cellular response to peptide hormone stimulus // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0009925 // basal plasma membrane // inferred from direct assay /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0019861 // flagellum // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation /// 0060076 // excitatory synapse // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // non-traceable author statement /// 0004713 // protein tyrosine kinase activity // traceable author statement /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005008 // hepatocyte growth factor-activated receptor activity // traceable author statement /// 0005008 // hepatocyte growth factor-activated receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008013 // beta-catenin binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0032403 // protein complex binding // inferred from electronic annotation /// 0043274 // phospholipase binding // inferred from electronic annotation /// 0043548 // phosphatidylinositol 3-kinase binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr7:116339138-116399652 (+) // 99.92 // q31.2"]
["11728807_at",63.806824,65.6526,62.572975,69.874016,67.955315,73.87401,-0.066009045,-0.024867058,-0.09417963,0.0650363,0.024866581,0.1453476,0.28526193,0.026311435,-1.1019831,-0.14010206,1.1019831,"down","SIRT5",23408.0,"0006342 // chromatin silencing // traceable author statement /// 0006471 // protein ADP-ribosylation // traceable author statement /// 0006476 // protein deacetylation // inferred from direct assay /// 0036047 // peptidyl-lysine demalonylation // inferred from direct assay /// 0036047 // peptidyl-lysine demalonylation // inferred from electronic annotation /// 0036049 // peptidyl-lysine desuccinylation // inferred from direct assay /// 0036049 // peptidyl-lysine desuccinylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005758 // mitochondrial intermembrane space // inferred from direct assay /// 0005758 // mitochondrial intermembrane space // inferred from electronic annotation /// 0005759 // mitochondrial matrix // inferred from direct assay /// 0005759 // mitochondrial matrix // inferred from electronic annotation","0003950 // NAD+ ADP-ribosyltransferase activity // traceable author statement /// 0008270 // zinc ion binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0036054 // protein-malonyllysine demalonylase activity // inferred from direct assay /// 0036054 // protein-malonyllysine demalonylase activity // inferred from electronic annotation /// 0036055 // protein-succinyllysine desuccinylase activity // inferred from direct assay /// 0036055 // protein-succinyllysine desuccinylase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070403 // NAD+ binding // inferred from direct assay /// 0070403 // NAD+ binding // inferred from electronic annotation","chr6:13579032-13605971 (+) // 89.3 // p23"]
["11718039_at",175.16954,174.00116,180.10268,150.11638,164.20737,169.71677,0.027638912,0.017983913,0.067706585,-0.19503164,-0.0655942,-0.017983913,0.4192204,0.07653044,1.0947841,0.13064644,1.0947841,"up","DCAF12",25853.0,"0016567 // protein ubiquitination // inferred by curator /// 0016567 // protein ubiquitination // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0080008 // CUL4-RING ubiquitin ligase complex // inferred from direct assay","","chr9:34086384-34126771 (-) // 94.9 // p13.3"]
["11761827_x_at",24.678,28.903376,22.753035,23.745975,31.942198,27.129137,-0.06830883,0.15970373,-0.18547535,-0.1238513,0.30392933,0.06830883,0.8062668,0.51475716,-1.0823416,-0.11415584,1.0823416,"down","C21orf58",54058.0,"","","","chr21:47734784-47743783 (-) // 79.81 // q22.3"]
["11731317_a_at",45.299488,45.54534,44.040813,52.03752,50.807827,51.466072,-0.08668232,-0.078873634,-0.12733603,0.11337519,0.078873634,0.097444534,0.07587968,4.2131532E-4,-1.1440856,-0.19419505,1.1440856,"down","MMP28",79148.0,"0006508 // proteolysis // non-traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // non-traceable author statement /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from electronic annotation","0004222 // metalloendopeptidase activity // traceable author statement /// 0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:34105508-34122640 (-) // 95.83 // q12"]
["11735529_s_at",27.81075,27.064304,24.639627,24.790586,27.162432,26.32919,0.05911541,0.019864082,-0.1155467,-0.10673475,0.02508545,-0.019864082,0.9164156,0.757752,1.015119,0.021648798,1.015119,"up","KLK14",43847.0,"0006508 // proteolysis // inferred from direct assay /// 0006508 // proteolysis // inferred from electronic annotation /// 0009566 // fertilization // inferred from direct assay /// 0045744 // negative regulation of G-protein coupled receptor protein signaling pathway // inferred from direct assay /// 0045745 // positive regulation of G-protein coupled receptor protein signaling pathway // inferred from direct assay /// 0048730 // epidermis morphogenesis // inferred from direct assay /// 0070684 // seminal clot liquefaction // inferred from direct assay","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from direct assay /// 0004252 // serine-type endopeptidase activity // non-traceable author statement /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr19:51581153-51587502 (-) // 92.32 // q13.41"]
["11722238_a_at",423.56918,389.04703,406.90564,430.65967,451.5422,472.9253,-0.011975288,-0.1346283,-0.06987858,0.011975288,0.08028793,0.14703941,0.34689286,0.04483377,-1.1110535,-0.15192825,1.1110535,"down","DPM3",54344.0,"0005975 // carbohydrate metabolic process // non-traceable author statement /// 0006488 // dolichol-linked oligosaccharide biosynthetic process // traceable author statement /// 0006501 // C-terminal protein lipidation // traceable author statement /// 0006506 // GPI anchor biosynthetic process // inferred from direct assay /// 0006506 // GPI anchor biosynthetic process // traceable author statement /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0018406 // protein C-linked glycosylation via 2'-alpha-mannosyl-L-tryptophan // traceable author statement /// 0031647 // regulation of protein stability // inferred from physical interaction /// 0035268 // protein mannosylation // traceable author statement /// 0035269 // protein O-linked mannosylation // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030176 // integral to endoplasmic reticulum membrane // inferred from direct assay /// 0031501 // mannosyltransferase complex // traceable author statement /// 0033185 // dolichol-phosphate-mannose synthase complex // inferred from direct assay","0004582 // dolichyl-phosphate beta-D-mannosyltransferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation","chr1:155112366-155113071 (-) // 74.87 // q22"]
["11752302_a_at",182.84583,184.11917,186.0423,224.767,206.55798,212.2651,-0.100461006,-0.09044886,-0.07545805,0.19734144,0.07545805,0.11477804,0.14381768,0.004006244,-1.1631054,-0.2179818,1.1631054,"down","LAMB3",3914.0,"0007155 // cell adhesion // inferred from electronic annotation /// 0008544 // epidermis development // traceable author statement /// 0031581 // hemidesmosome assembly // traceable author statement /// 0034329 // cell junction assembly // traceable author statement /// 0050873 // brown fat cell differentiation // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005604 // basement membrane // inferred from electronic annotation /// 0005610 // laminin-5 complex // inferred from electronic annotation","0005198 // structural molecule activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0032403 // protein complex binding // inferred from electronic annotation","chr1:209790922-209825770 (-) // 99.91 // q32.2"]
["11732974_at",16.640753,13.385149,18.160446,16.52736,16.402517,16.52736,0.00986433,-0.30422306,0.13594341,0.0,-0.010939121,0.0,0.9029996,0.7263667,-1.0346614,-0.04915873,1.0346614,"down","OR1D2",4991.0,"0000060 // protein import into nucleus, translocation // inferred from mutant phenotype /// 0006928 // cellular component movement // traceable author statement /// 0006935 // chemotaxis // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from direct assay /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007338 // single fertilization // inferred from electronic annotation /// 0007608 // sensory perception of smell // traceable author statement /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from direct assay /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement /// 0004984 // olfactory receptor activity // inferred from direct assay /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr17:2995351-2996290 (-) // 97.41 // p13.3"]
["11717565_s_at",518.22,524.67676,512.1476,503.32172,510.6149,466.5237,0.019166946,0.037031174,0.0021619797,-0.022916794,-0.0021619797,-0.13244724,0.54314613,0.15910074,1.0511452,0.07196196,1.0511452,"up","EMP1",2012.0,"0007275 // multicellular organismal development // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0008544 // epidermis development // traceable author statement /// 0016049 // cell growth // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","","chr12:13349448-13371604 (+) // 93.18 // p13.1"]
["11754820_a_at",17.97372,16.531485,18.493517,16.0931,16.853401,17.810663,0.052998543,-0.06767416,0.094129086,-0.10644817,-0.03985071,0.03985071,0.73301226,0.39034757,1.0438882,0.061967224,1.0438882,"up","RLTPR",146206.0,"","","","chr16:67681771-67687115 (+) // 93.38 // q22.1"]
["11716241_x_at",283.87402,283.91623,269.8512,275.00525,277.0005,270.874,0.040576935,0.04079151,-0.032509804,-0.005214691,0.005214691,-0.027051926,0.73175555,0.3885943,1.0176938,0.025303494,1.0176938,"up","RAB6A",5870.0,"0000042 // protein targeting to Golgi // inferred from direct assay /// 0006184 // GTP catabolic process // inferred from direct assay /// 0006184 // GTP catabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006890 // retrograde vesicle-mediated transport, Golgi to ER // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0018125 // peptidyl-cysteine methylation // inferred from direct assay /// 0034067 // protein localization in Golgi apparatus // inferred from direct assay /// 0072385 // minus-end-directed organelle transport along microtubule // traceable author statement","0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from direct assay /// 0003924 // GTPase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from direct assay /// 0005525 // GTP binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from physical interaction","chr11:73386684-73472185 (-) // 96.38 // q13.4"]
["11738072_a_at",54.54099,53.24393,53.27495,49.70742,52.76225,51.315613,0.041279316,0.0065555573,0.0073957443,-0.092600346,-0.0065555573,-0.04666376,0.40758198,0.07050709,1.0475483,0.06701676,1.0475483,"up","LRCH3",84859.0,"","0005576 // extracellular region // inferred from electronic annotation","","chr3:197518144-197598856 (+) // 84.53 // q29"]
["11716593_x_at",220.84189,221.00201,229.45648,232.43806,226.90512,232.41893,-0.047141075,-0.04609537,0.0080657005,0.026691437,-0.0080657005,0.026572704,0.48335204,0.11443099,-1.0305799,-0.043456394,1.0305799,"down","BTBD1",53339.0,"0016567 // protein ubiquitination // inferred from electronic annotation /// 0043393 // regulation of protein binding // non-traceable author statement","0000932 // cytoplasmic mRNA processing body // inferred from direct assay /// 0000932 // cytoplasmic mRNA processing body // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr15:83685174-83736186 (-) // 96.3 // q25.2"]
["11760831_x_at",67.36565,63.512215,51.399517,69.24868,68.42528,68.53528,-0.011258602,-0.09623718,-0.40151644,0.028515339,0.011258125,0.013575554,0.5749235,0.18917364,-1.1387521,-0.18745372,1.1387521,"down","FAHD2B /// FAHD2CP","151313 /// 729234","0008152 // metabolic process // inferred from electronic annotation","","0003824 // catalytic activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:96676345-96681598 (+) // 71.1 // q11.1 /// chr2:97755320-97760572 (-) // 75.0 // q11.2"]
["11721014_s_at",274.9271,274.68402,296.03467,271.55457,250.07773,266.04083,0.009541512,0.008265495,0.11625862,-0.008265495,-0.12713099,-0.037859917,0.4801549,0.112746544,1.0735881,0.102440625,1.0735881,"up","WTAP",9589.0,"0006397 // mRNA processing // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0031965 // nuclear membrane // inferred from direct assay","","chr6:160148026-160171040 (+) // 99.51 // q25.3"]
["11716588_at",676.44543,694.60876,767.21674,747.3326,848.60284,721.34753,-0.11824894,-0.08002186,0.06341171,0.025527954,0.20886707,-0.025527954,0.64870524,0.27250686,-1.0826564,-0.11457543,1.0826564,"down","TMEM165",55858.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr4:56262089-56292341 (+) // 96.6 // q12"]
["11724015_at",33.529186,31.646833,36.187504,36.605194,38.43019,35.59928,-0.0982523,-0.18160868,0.011821747,0.028378487,0.09857035,-0.011821747,0.49025077,0.11935936,-1.0925672,-0.12772202,1.0925672,"down","FRA10AC1",118924.0,"","0005634 // nucleus // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr10:95428327-95462338 (-) // 79.45 // q23.33"]
["11747477_a_at",51.15342,54.0438,42.37596,53.0506,47.29703,50.34555,0.011483192,0.09078169,-0.26010132,0.06402159,-0.101597786,-0.011483192,0.9227449,0.77121913,-1.0254513,-0.03625898,1.0254513,"down","MAPK8",5599.0,"0000165 // MAPK cascade // inferred from electronic annotation /// 0001503 // ossification // inferred from electronic annotation /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006950 // response to stress // traceable author statement /// 0007254 // JNK cascade // inferred from direct assay /// 0007254 // JNK cascade // traceable author statement /// 0007254 // JNK cascade // inferred from electronic annotation /// 0007258 // JUN phosphorylation // inferred from direct assay /// 0007258 // JUN phosphorylation // inferred from electronic annotation /// 0008063 // Toll signaling pathway // traceable author statement /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0008629 // induction of apoptosis by intracellular signals // traceable author statement /// 0008633 // activation of pro-apoptotic gene products // traceable author statement /// 0009411 // response to UV // inferred from direct assay /// 0010628 // positive regulation of gene expression // inferred from mutant phenotype /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from direct assay /// 0018107 // peptidyl-threonine phosphorylation // inferred from direct assay /// 0018107 // peptidyl-threonine phosphorylation // inferred from mutant phenotype /// 0018107 // peptidyl-threonine phosphorylation // inferred from electronic annotation /// 0031063 // regulation of histone deacetylation // inferred from mutant phenotype /// 0031558 // induction of apoptosis in response to chemical stimulus // inferred from electronic annotation /// 0032091 // negative regulation of protein binding // inferred from direct assay /// 0032880 // regulation of protein localization // inferred from direct assay /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0045087 // innate immune response // traceable author statement /// 0046686 // response to cadmium ion // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // traceable author statement /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0071260 // cellular response to mechanical stimulus // inferred from expression pattern /// 0090045 // positive regulation of deacetylase activity // inferred from mutant phenotype /// 2000017 // positive regulation of determination of dorsal identity // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004705 // JUN kinase activity // inferred from direct assay /// 0004705 // JUN kinase activity // inferred from electronic annotation /// 0004707 // MAP kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0035033 // histone deacetylase regulator activity // inferred from mutant phenotype /// 0042826 // histone deacetylase binding // inferred from physical interaction","chr10:49514681-49643430 (+) // 100.0 // q11.22"]
["11733562_a_at",75.05526,64.89969,69.48033,61.899265,65.41666,69.50125,0.1548214,-0.05491972,0.043473244,-0.123209,-0.043473244,0.043907642,0.68305075,0.3159273,1.0634236,0.08871643,1.0634236,"up","KLHDC10",23008.0,"","","","chr7:129710343-129773593 (+) // 96.7 // q32.2"]
["11721326_at",7.411583,6.4335403,6.3910103,6.259932,7.336481,7.120601,0.13097596,-0.07319307,-0.082761765,-0.11265874,0.11628246,0.07319331,0.9129608,0.7489439,-1.0237986,-0.03393192,1.0237986,"down","C3orf14",57415.0,"","","","chr3:62304717-62319977 (+) // 97.09 // p14.2"]
["11762121_a_at",10.2656355,10.66479,11.406376,8.956146,11.172665,10.676948,-0.05585456,-8.2182884E-4,0.096162796,-0.25272727,0.066295624,8.2182884E-4,0.80962247,0.5216269,1.0533844,0.07503203,1.0533844,"up","DNMT3B",1789.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006306 // DNA methylation // non-traceable author statement /// 0006306 // DNA methylation // traceable author statement /// 0006306 // DNA methylation // inferred from electronic annotation /// 0006346 // methylation-dependent chromatin silencing // inferred from electronic annotation /// 0006349 // regulation of gene expression by genetic imprinting // inferred from electronic annotation /// 0010212 // response to ionizing radiation // inferred from electronic annotation /// 0010424 // DNA methylation on cytosine within a CG sequence // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from mutant phenotype /// 0031503 // protein complex localization // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0043045 // DNA methylation involved in embryo development // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from electronic annotation /// 0045814 // negative regulation of gene expression, epigenetic // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0046498 // S-adenosylhomocysteine metabolic process // inferred from electronic annotation /// 0046499 // S-adenosylmethioninamine metabolic process // inferred from electronic annotation /// 0051571 // positive regulation of histone H3-K4 methylation // inferred from mutant phenotype /// 0051573 // negative regulation of histone H3-K9 methylation // inferred from mutant phenotype /// 0071230 // cellular response to amino acid stimulus // inferred from electronic annotation /// 0090116 // C-5 methylation of cytosine // inferred from direct assay /// 0090116 // C-5 methylation of cytosine // non-traceable author statement /// 0090116 // C-5 methylation of cytosine // traceable author statement /// 0090116 // C-5 methylation of cytosine // inferred from electronic annotation","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000792 // heterochromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005720 // nuclear heterochromatin // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003714 // transcription corepressor activity // inferred from direct assay /// 0003714 // transcription corepressor activity // inferred from mutant phenotype /// 0003886 // DNA (cytosine-5-)-methyltransferase activity // inferred from direct assay /// 0003886 // DNA (cytosine-5-)-methyltransferase activity // non-traceable author statement /// 0003886 // DNA (cytosine-5-)-methyltransferase activity // traceable author statement /// 0003886 // DNA (cytosine-5-)-methyltransferase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0009008 // DNA-methyltransferase activity // non-traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0045322 // unmethylated CpG binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051718 // DNA (cytosine-5-)-methyltransferase activity, acting on CpG substrates // inferred from electronic annotation","chr20:31350451-31386319 (+) // 100.0 // q11.21"]
["11730260_a_at",7.948755,7.669193,7.808185,7.789137,7.892372,7.5085735,0.02750349,-0.02415061,0.0017616749,-0.0017619133,0.01723361,-0.054686308,0.8491688,0.60261065,1.0102948,0.01477632,1.0102948,"up","PRKAR2B",5577.0,"0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0001932 // regulation of protein phosphorylation // inferred from electronic annotation /// 0006112 // energy reserve metabolic process // traceable author statement /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006833 // water transport // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007202 // activation of phospholipase C activity // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0007612 // learning // inferred from electronic annotation /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0034199 // activation of protein kinase A activity // traceable author statement /// 0035556 // intracellular signal transduction // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045859 // regulation of protein kinase activity // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0050796 // regulation of insulin secretion // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0071377 // cellular response to glucagon stimulus // traceable author statement","0000267 // cell fraction // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from direct assay /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005626 // insoluble fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005952 // cAMP-dependent protein kinase complex // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0045121 // membrane raft // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0008603 // cAMP-dependent protein kinase regulator activity // inferred from electronic annotation /// 0008603 // cAMP-dependent protein kinase regulator activity // traceable author statement /// 0016301 // kinase activity // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0030552 // cAMP binding // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from direct assay","chr7:106685093-106802256 (+) // 97.34 // q22.3"]
["11734327_a_at",15.897966,18.813284,18.090702,17.139246,17.059332,21.035322,-0.14743376,0.09547567,0.038972378,-0.038972378,-0.045714855,0.2565379,0.86765486,0.64471173,-1.0436313,-0.06161214,1.0436313,"down","CHRM5",1133.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007197 // adenylate cyclase-inhibiting G-protein coupled acetylcholine receptor signaling pathway // traceable author statement /// 0007213 // G-protein coupled acetylcholine receptor signaling pathway // traceable author statement /// 0007213 // G-protein coupled acetylcholine receptor signaling pathway // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0015872 // dopamine transport // inferred from electronic annotation /// 0019226 // transmission of nerve impulse // inferred from electronic annotation /// 0060304 // regulation of phosphatidylinositol dephosphorylation // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0004435 // phosphatidylinositol phospholipase C activity // traceable author statement /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0016907 // G-protein coupled acetylcholine receptor activity // inferred from electronic annotation /// 0016907 // G-protein coupled acetylcholine receptor activity // traceable author statement","chr15:34260445-34357295 (+) // 91.3 // q14"]
["11752851_a_at",75.33683,65.19298,71.62014,64.6391,74.8951,70.70735,0.08224249,-0.12639618,0.009252071,-0.13870573,0.0737586,-0.009252548,0.96335477,0.8875255,1.0091212,0.013099429,1.0091212,"up","PPHLN1",51535.0,"0031424 // keratinization // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","","chr12:42719964-42835231 (+) // 59.36 // q12"]
["11747382_a_at",113.3414,120.47365,131.66165,110.23701,104.09985,112.77512,0.0036129951,0.09165573,0.21977282,-0.036453724,-0.119093895,-0.0036129951,0.4445999,0.091690764,1.1157914,0.15806739,1.1157914,"up","SERGEF",26297.0,"0007165 // signal transduction // traceable author statement /// 0050709 // negative regulation of protein secretion // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0045111 // intermediate filament cytoskeleton // inferred from direct assay","0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005087 // Ran guanyl-nucleotide exchange factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr11:17868108-18034500 (-) // 89.0 // p15.1"]
["11723973_at",171.1034,184.36897,178.34619,177.68944,163.65779,179.81052,-0.05715084,0.05057621,0.0026612282,-0.0026612282,-0.12133694,0.014457703,0.8198339,0.541809,1.0247053,0.035209045,1.0247053,"up","CHST12",55501.0,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0016051 // carbohydrate biosynthetic process // inferred from electronic annotation /// 0030206 // chondroitin sulfate biosynthetic process // inferred from direct assay /// 0030208 // dermatan sulfate biosynthetic process // inferred from direct assay","0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030173 // integral to Golgi membrane // non-traceable author statement","0008146 // sulfotransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0047756 // chondroitin 4-sulfotransferase activity // inferred from direct assay /// 0047756 // chondroitin 4-sulfotransferase activity // inferred from electronic annotation /// 0050656 // 3'-phosphoadenosine 5'-phosphosulfate binding // non-traceable author statement","chr7:2472195-2474426 (+) // 80.02 // p22.3"]
["11747306_x_at",281.9996,286.20743,272.001,273.7181,269.0406,277.55054,0.032972336,0.054340363,-0.019108772,-0.010029793,-0.03489685,0.010029793,0.62941957,0.24729519,1.0241073,0.03436693,1.0241073,"up","C17orf81",23587.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr17:7155604-7162287 (+) // 98.31 // p13.1"]
["11729468_a_at",157.83896,149.94376,146.56976,152.13205,158.1667,147.624,0.06358099,-0.010451317,-0.043284893,0.010451794,0.06657362,-0.032945156,0.9342806,0.80276823,-1.0079415,-0.011411886,1.0079415,"down","BZRAP1",9256.0,"","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0030156 // benzodiazepine receptor binding // inferred from physical interaction","chr17:56378591-56406156 (-) // 93.81 // q22"]
["11747774_a_at",10.455248,11.622545,11.011608,10.066415,10.854665,11.432279,-0.06444287,0.088255644,0.010355234,-0.11912036,-0.010354996,0.064442635,0.8737949,0.65752834,1.0231849,0.033066873,1.0231849,"up","SLC11A1",6556.0,"0000060 // protein import into nucleus, translocation // inferred from electronic annotation /// 0001818 // negative regulation of cytokine production // inferred from sequence or structural similarity /// 0001818 // negative regulation of cytokine production // inferred from electronic annotation /// 0001819 // positive regulation of cytokine production // inferred from sequence or structural similarity /// 0001819 // positive regulation of cytokine production // inferred from electronic annotation /// 0002309 // T cell proliferation involved in immune response // inferred from sequence or structural similarity /// 0002309 // T cell proliferation involved in immune response // inferred from electronic annotation /// 0002369 // T cell cytokine production // inferred from sequence or structural similarity /// 0002369 // T cell cytokine production // inferred from electronic annotation /// 0002606 // positive regulation of dendritic cell antigen processing and presentation // inferred from sequence or structural similarity /// 0002606 // positive regulation of dendritic cell antigen processing and presentation // inferred from electronic annotation /// 0002827 // positive regulation of T-helper 1 type immune response // inferred from sequence or structural similarity /// 0002827 // positive regulation of T-helper 1 type immune response // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006826 // iron ion transport // inferred from mutant phenotype /// 0006826 // iron ion transport // inferred from electronic annotation /// 0006828 // manganese ion transport // inferred from sequence or structural similarity /// 0006828 // manganese ion transport // inferred from electronic annotation /// 0006876 // cellular cadmium ion homeostasis // inferred from genetic interaction /// 0006879 // cellular iron ion homeostasis // inferred from mutant phenotype /// 0006909 // phagocytosis // inferred from sequence or structural similarity /// 0006909 // phagocytosis // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from sequence or structural similarity /// 0006954 // inflammatory response // inferred from electronic annotation /// 0006955 // immune response // non-traceable author statement /// 0007035 // vacuolar acidification // inferred from sequence or structural similarity /// 0007035 // vacuolar acidification // inferred from electronic annotation /// 0009617 // response to bacterium // inferred from direct assay /// 0010628 // positive regulation of gene expression // inferred from sequence or structural similarity /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0015707 // nitrite transport // inferred from sequence or structural similarity /// 0015707 // nitrite transport // inferred from electronic annotation /// 0032147 // activation of protein kinase activity // inferred from sequence or structural similarity /// 0032147 // activation of protein kinase activity // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from sequence or structural similarity /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0032623 // interleukin-2 production // inferred from sequence or structural similarity /// 0032623 // interleukin-2 production // inferred from electronic annotation /// 0032632 // interleukin-3 production // inferred from sequence or structural similarity /// 0032632 // interleukin-3 production // inferred from electronic annotation /// 0032729 // positive regulation of interferon-gamma production // inferred from sequence or structural similarity /// 0032729 // positive regulation of interferon-gamma production // inferred from electronic annotation /// 0034341 // response to interferon-gamma // inferred from sequence or structural similarity /// 0034341 // response to interferon-gamma // inferred from electronic annotation /// 0042060 // wound healing // inferred from sequence or structural similarity /// 0042060 // wound healing // inferred from electronic annotation /// 0042116 // macrophage activation // inferred from sequence or structural similarity /// 0042116 // macrophage activation // inferred from electronic annotation /// 0042742 // defense response to bacterium // inferred from sequence or structural similarity /// 0042742 // defense response to bacterium // inferred from electronic annotation /// 0042832 // defense response to protozoan // inferred from sequence or structural similarity /// 0042832 // defense response to protozoan // inferred from electronic annotation /// 0043091 // L-arginine import // inferred from sequence or structural similarity /// 0043091 // L-arginine import // inferred from electronic annotation /// 0045342 // MHC class II biosynthetic process // inferred from sequence or structural similarity /// 0045342 // MHC class II biosynthetic process // inferred from electronic annotation /// 0045730 // respiratory burst // inferred from sequence or structural similarity /// 0045730 // respiratory burst // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048002 // antigen processing and presentation of peptide antigen // inferred from sequence or structural similarity /// 0048002 // antigen processing and presentation of peptide antigen // inferred from electronic annotation /// 0048255 // mRNA stabilization // inferred from sequence or structural similarity /// 0048255 // mRNA stabilization // inferred from electronic annotation /// 0050766 // positive regulation of phagocytosis // inferred from sequence or structural similarity /// 0050766 // positive regulation of phagocytosis // inferred from electronic annotation /// 0050829 // defense response to Gram-negative bacterium // inferred from sequence or structural similarity /// 0050829 // defense response to Gram-negative bacterium // inferred from electronic annotation /// 0055072 // iron ion homeostasis // inferred from sequence or structural similarity /// 0055072 // iron ion homeostasis // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0060586 // multicellular organismal iron ion homeostasis // inferred from sequence or structural similarity /// 0060586 // multicellular organismal iron ion homeostasis // inferred from electronic annotation /// 0070574 // cadmium ion transmembrane transport // inferred from genetic interaction /// 0070839 // divalent metal ion export // inferred from sequence or structural similarity /// 0070839 // divalent metal ion export // inferred from electronic annotation /// 0071421 // manganese ion transmembrane transport // inferred from sequence or structural similarity /// 0071421 // manganese ion transmembrane transport // inferred from electronic annotation","0005764 // lysosome // inferred from sequence or structural similarity /// 0005764 // lysosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from sequence or structural similarity /// 0005770 // late endosome // inferred from electronic annotation /// 0005773 // vacuole // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from mutant phenotype /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0009279 // cell outer membrane // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030670 // phagocytic vesicle membrane // inferred from direct assay /// 0030670 // phagocytic vesicle membrane // inferred from electronic annotation /// 0031902 // late endosome membrane // traceable author statement /// 0070821 // tertiary granule membrane // inferred from direct assay","0005215 // transporter activity // inferred from electronic annotation /// 0005384 // manganese ion transmembrane transporter activity // inferred from sequence or structural similarity /// 0005384 // manganese ion transmembrane transporter activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046915 // transition metal ion transmembrane transporter activity // inferred from genetic interaction /// 0051139 // metal ion:hydrogen antiporter activity // inferred from genetic interaction","chr2:219246973-219252721 (+) // 84.15 // q35"]
["11722524_s_at",67.87195,62.276424,71.47941,73.08756,70.45119,77.75075,-0.06426048,-0.18839025,0.010451317,0.042550087,-0.010451794,0.13178062,0.50472057,0.13050786,-1.0983665,-0.13535953,1.0983665,"down","TMCO4",255104.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr1:20008705-20113611 (-) // 87.5 // p36.13"]
["11716997_x_at",527.68506,552.5622,521.9487,535.58014,546.20325,558.81256,-0.035593033,0.030866623,-0.051362038,-0.014167786,0.014167786,0.047094345,0.69080454,0.32656932,-1.0241268,-0.034394305,1.0241268,"down","TSPAN4",7106.0,"0006461 // protein complex assembly // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr11:842823-867116 (+) // 97.83 // p15.5"]
["11717079_a_at",438.6174,455.35706,441.5565,451.31363,432.8384,448.8739,-0.02149105,0.032544136,-0.011856079,0.019676208,-0.040625572,0.011856079,0.9743758,0.9179786,1.0019172,0.0027633489,1.0019172,"up","VPS52",6293.0,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0005768 // endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","","chr6:33218048-33239701 (-) // 97.61 // p21.32"]
["11750705_a_at",88.41577,84.630104,80.96338,81.52751,78.410866,79.44029,0.12202597,0.058893204,-0.0050086975,0.0050091743,-0.05122423,-0.032406807,0.46248496,0.10257157,1.0605731,0.08484406,1.0605731,"up","OSBP2",23762.0,"0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation","0005543 // phospholipid binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation","chr22:31218502-31302701 (+) // 99.92 // q12.2"]
["11718627_at",37.777374,36.917416,42.384632,40.61018,40.840435,38.152115,-0.05927992,-0.09250069,0.106739044,0.045039177,0.053195953,-0.045039177,0.8751083,0.6607299,-1.0229572,-0.032745793,1.0229572,"down","TRAK1",22906.0,"0006357 // regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0006493 // protein O-linked glycosylation // inferred from sequence or structural similarity /// 0006605 // protein targeting // inferred from sequence or structural similarity /// 0008333 // endosome to lysosome transport // inferred from direct assay","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0005769 // early endosome // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0016740 // transferase activity // inferred from electronic annotation /// 0050811 // GABA receptor binding // inferred from electronic annotation","chr3:42132745-42267381 (+) // 98.06 // p22.1"]
["11727110_a_at",12.505377,13.10609,12.0866585,12.468332,12.861435,11.2711315,0.0021400452,0.06982851,-0.046993494,-0.0021402836,0.04264283,-0.14777637,0.8217417,0.5448832,1.0310276,0.04408289,1.0310276,"up","WSCD2",9671.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr12:108523119-108644311 (+) // 98.65 // q23.3"]
["11742650_at",7.258659,8.628398,6.6391463,9.063047,7.787515,8.2876,-0.14635563,0.10303402,-0.2750609,0.17393756,-0.04489541,0.04489565,0.64514625,0.2686667,-1.1204722,-0.16410685,1.1204722,"down","DPRX",503834.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr19:54135309-54140263 (+) // 100.0 // q13.42"]
["11751513_a_at",8.654663,9.171619,8.388685,8.412133,9.116725,8.032925,0.020503044,0.10420179,-0.024529934,-0.020502806,0.095541,-0.087049246,0.8466698,0.5977168,1.0262593,0.0373953,1.0262593,"up","NME9",347736.0,"0006165 // nucleoside diphosphate phosphorylation // inferred from electronic annotation /// 0006183 // GTP biosynthetic process // inferred from electronic annotation /// 0006228 // UTP biosynthetic process // inferred from electronic annotation /// 0006241 // CTP biosynthetic process // inferred from electronic annotation /// 0045454 // cell redox homeostasis // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation","0004550 // nucleoside diphosphate kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation","chr3:137980932-138048686 (-) // 94.51 // q22.3"]
["11724629_at",351.16217,356.77066,373.56058,367.588,373.7268,368.8357,-0.06839657,-0.045536995,0.02080822,-0.0024442673,0.021450043,0.0024442673,0.6234553,0.24042739,-1.026826,-0.038191766,1.026826,"down","TUSC1",286319.0,"","","","chr9:25676388-25678856 (-) // 96.9 // p21.2"]
["11745357_x_at",557.03345,541.2744,562.4693,564.8562,581.7485,582.6664,-0.017065048,-0.05846882,-0.0030546188,0.0030546188,0.04556656,0.047841072,0.37919846,0.057637326,-1.0412743,-0.058350176,1.0412743,"down","AP1S1",1174.0,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006892 // post-Golgi vesicle-mediated transport // traceable author statement /// 0006897 // endocytosis // inferred from electronic annotation /// 0006898 // receptor-mediated endocytosis // traceable author statement /// 0009615 // response to virus // inferred from expression pattern /// 0015031 // protein transport // inferred from electronic annotation /// 0016032 // viral reproduction // traceable author statement /// 0016044 // cellular membrane organization // traceable author statement /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0050690 // regulation of defense response to virus by virus // traceable author statement","0000139 // Golgi membrane // traceable author statement /// 0005765 // lysosomal membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005905 // coated pit // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030117 // membrane coat // inferred from electronic annotation /// 0030121 // AP-1 adaptor complex // traceable author statement /// 0030130 // clathrin coat of trans-Golgi network vesicle // non-traceable author statement /// 0030659 // cytoplasmic vesicle membrane // traceable author statement /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0008565 // protein transporter activity // inferred from electronic annotation","chr7:100799873-100804556 (+) // 94.28 // q22.1"]
["11729051_a_at",82.6241,82.053955,83.04067,85.04069,74.07673,85.67147,-0.003627777,-0.013617039,0.003627777,0.037962914,-0.16117,0.048624516,0.92664504,0.7811991,1.0141857,0.02032179,1.0141857,"up","PPFIBP1",8496.0,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0015074 // DNA integration // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation","0005886 // plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008907 // integrase activity // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr12:27677044-27800910 (+) // 95.42 // p11.23"]
["11744232_a_at",501.58463,490.95837,531.7294,457.47473,460.95685,457.72125,0.076376915,0.045484543,0.16057587,-0.05642414,-0.045484543,-0.055646896,0.22051114,0.013238677,1.107007,0.14666438,1.107007,"up","RFC5",5985.0,"0000075 // cell cycle checkpoint // traceable author statement /// 0000084 // S phase of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0000722 // telomere maintenance via recombination // traceable author statement /// 0000723 // telomere maintenance // traceable author statement /// 0006260 // DNA replication // non-traceable author statement /// 0006260 // DNA replication // traceable author statement /// 0006260 // DNA replication // inferred from electronic annotation /// 0006271 // DNA strand elongation involved in DNA replication // traceable author statement /// 0006281 // DNA repair // non-traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006283 // transcription-coupled nucleotide-excision repair // traceable author statement /// 0006289 // nucleotide-excision repair // traceable author statement /// 0006297 // nucleotide-excision repair, DNA gap filling // traceable author statement /// 0032201 // telomere maintenance via semi-conservative replication // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005663 // DNA replication factor C complex // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0019899 // enzyme binding // non-traceable author statement","chr12:118454507-118471352 (+) // 83.8 // q24.23"]
["11731587_a_at",17.370846,17.766655,21.52315,19.883745,15.422355,17.32896,-0.01625204,0.01625204,0.29296923,0.17866945,-0.18789697,-0.01973486,0.79707533,0.49863404,1.0772182,0.107310474,1.0772182,"up","SEPT4",5414.0,"0000910 // cytokinesis // traceable author statement /// 0006184 // GTP catabolic process // traceable author statement /// 0006915 // apoptotic process // non-traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007286 // spermatid development // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0030382 // sperm mitochondrion organization // inferred from electronic annotation /// 0031398 // positive regulation of protein ubiquitination // inferred from direct assay /// 0042981 // regulation of apoptotic process // non-traceable author statement /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0048240 // sperm capacitation // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 2001244 // positive regulation of intrinsic apoptotic signaling pathway // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // non-traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0009434 // microtubule-based flagellum // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0005198 // structural molecule activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation","chr17:56597616-56609454 (-) // 99.39 // q22"]
["11730944_a_at",9.571088,9.758123,8.407131,8.277688,9.765978,8.48841,0.08659434,0.114515066,-0.10047507,-0.12286067,0.115675926,-0.08659434,0.825967,0.5534539,1.0459431,0.06480443,1.0459431,"up","CCDC65",85478.0,"","","","chr12:49297892-49315354 (+) // 98.75 // q13.12"]
["11748495_a_at",42.293633,41.217205,44.724163,40.097515,33.5125,41.217205,0.037193775,0.0,0.117807865,-0.039733887,-0.29854727,0.0,0.5598621,0.17494985,1.1207213,0.16442761,1.1207213,"up","OSR2",116039.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001656 // metanephros development // inferred from sequence or structural similarity /// 0001656 // metanephros development // inferred from electronic annotation /// 0001823 // mesonephros development // inferred from sequence or structural similarity /// 0001823 // mesonephros development // inferred from electronic annotation /// 0002062 // chondrocyte differentiation // inferred from sequence or structural similarity /// 0002062 // chondrocyte differentiation // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from sequence or structural similarity /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0009790 // embryo development // inferred from sequence or structural similarity /// 0009790 // embryo development // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from sequence or structural similarity /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from sequence or structural similarity /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030501 // positive regulation of bone mineralization // inferred from sequence or structural similarity /// 0030501 // positive regulation of bone mineralization // inferred from electronic annotation /// 0033687 // osteoblast proliferation // inferred from sequence or structural similarity /// 0033687 // osteoblast proliferation // inferred from electronic annotation /// 0035115 // embryonic forelimb morphogenesis // inferred from sequence or structural similarity /// 0035115 // embryonic forelimb morphogenesis // inferred from electronic annotation /// 0035116 // embryonic hindlimb morphogenesis // inferred from sequence or structural similarity /// 0035116 // embryonic hindlimb morphogenesis // inferred from electronic annotation /// 0036023 // embryonic skeletal limb joint morphogenesis // inferred from sequence or structural similarity /// 0036023 // embryonic skeletal limb joint morphogenesis // inferred from electronic annotation /// 0042474 // middle ear morphogenesis // inferred from sequence or structural similarity /// 0042474 // middle ear morphogenesis // inferred from electronic annotation /// 0042476 // odontogenesis // inferred from sequence or structural similarity /// 0042476 // odontogenesis // inferred from electronic annotation /// 0042733 // embryonic digit morphogenesis // inferred from sequence or structural similarity /// 0042733 // embryonic digit morphogenesis // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048704 // embryonic skeletal system morphogenesis // inferred from sequence or structural similarity /// 0048704 // embryonic skeletal system morphogenesis // inferred from electronic annotation /// 0048793 // pronephros development // inferred from electronic annotation /// 0050679 // positive regulation of epithelial cell proliferation // inferred from sequence or structural similarity /// 0050679 // positive regulation of epithelial cell proliferation // inferred from electronic annotation /// 0060021 // palate development // inferred from sequence or structural similarity /// 0060021 // palate development // inferred from electronic annotation /// 0060272 // embryonic skeletal joint morphogenesis // inferred from sequence or structural similarity /// 0060272 // embryonic skeletal joint morphogenesis // inferred from electronic annotation /// 0060322 // head development // inferred from sequence or structural similarity /// 0060322 // head development // inferred from electronic annotation /// 0060349 // bone morphogenesis // inferred from sequence or structural similarity /// 0060349 // bone morphogenesis // inferred from electronic annotation /// 0061029 // eyelid development in camera-type eye // inferred from sequence or structural similarity /// 0061029 // eyelid development in camera-type eye // inferred from electronic annotation /// 0072498 // embryonic skeletal joint development // inferred from sequence or structural similarity /// 0072498 // embryonic skeletal joint development // inferred from electronic annotation /// 2000543 // positive regulation of gastrulation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from sequence or structural similarity /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:99956669-99963990 (+) // 99.94 // q22.2"]
["11716172_at",399.61966,395.8526,399.411,389.62277,401.98615,404.8435,3.7670135E-4,-0.013287544,-3.7670135E-4,-0.036172867,0.00889492,0.01911354,0.9772104,0.9271777,-1.0011843,-0.0017076366,1.0011843,"down","SYVN1",84447.0,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0030433 // ER-associated protein catabolic process // inferred from direct assay /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:64893931-64902003 (-) // 96.38 // q13.1"]
["11762329_s_at",5.0847945,6.5414057,5.3746715,6.071008,6.489743,5.4031544,-0.1716795,0.19173169,-0.09169245,0.084067106,0.18029237,-0.084067106,0.8320595,0.5665642,-1.0599363,-0.08397754,1.0599363,"down","YME1L1",10730.0,"0006508 // proteolysis // inferred from electronic annotation /// 0006515 // misfolded or incompletely synthesized protein catabolic process // inferred from mutant phenotype /// 0006955 // immune response // non-traceable author statement /// 0006968 // cellular defense response // non-traceable author statement /// 0007005 // mitochondrion organization // inferred from mutant phenotype /// 0008283 // cell proliferation // inferred from mutant phenotype /// 0030163 // protein catabolic process // inferred from electronic annotation /// 0031295 // T cell costimulation // traceable author statement /// 0045768 // positive regulation of anti-apoptosis // inferred from mutant phenotype /// 0050776 // regulation of immune response // traceable author statement /// 0050852 // T cell receptor signaling pathway // traceable author statement","0005743 // mitochondrial inner membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // non-traceable author statement /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0042287 // MHC protein binding // non-traceable author statement /// 0042605 // peptide antigen binding // non-traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation","chr14:22465924-23019607 (+) // 99.04 // q11.2"]
["11734631_s_at",113.30435,110.92167,119.68085,125.138214,122.37406,111.56264,-0.039494514,-0.070156574,0.039494514,0.10382414,0.07160044,-0.061843872,0.718324,0.3673669,-1.0433663,-0.061245758,1.0433663,"down","BAGE2 /// BAGE3 /// BAGE4 /// BAGE5 /// MLL3","58508 /// 85316 /// 85317 /// 85318 /// 85319","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0016571 // histone methylation // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0051568 // histone H3-K4 methylation // inferred from direct assay /// 0051568 // histone H3-K4 methylation // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0035097 // histone methyltransferase complex // inferred from direct assay /// 0035097 // histone methyltransferase complex // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0018024 // histone-lysine N-methyltransferase activity // inferred from electronic annotation /// 0042800 // histone methyltransferase activity (H3-K4 specific) // inferred from direct assay /// 0042800 // histone methyltransferase activity (H3-K4 specific) // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr21:11020476-11058324 (-) // 81.44 // p11.1"]
["11745505_x_at",113.36099,107.61767,118.2853,102.69953,104.226616,108.68001,0.067923546,-0.0070853233,0.12927008,-0.07457161,-0.053277493,0.0070858,0.4403752,0.089269705,1.074469,0.103623815,1.074469,"up","ITSN1",6453.0,"0006897 // endocytosis // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0042327 // positive regulation of phosphorylation // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048488 // synaptic vesicle endocytosis // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement /// 0051897 // positive regulation of protein kinase B signaling cascade // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005905 // coated pit // inferred from direct assay /// 0005905 // coated pit // inferred from electronic annotation /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030139 // endocytic vesicle // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0005085 // guanyl-nucleotide exchange factor activity // non-traceable author statement /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005509 // calcium ion binding // non-traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0019209 // kinase activator activity // inferred from electronic annotation /// 0032947 // protein complex scaffold // inferred from direct assay /// 0070064 // proline-rich region binding // inferred from physical interaction","chr21:35014705-35209342 (+) // 96.89 // q22.11"]
["11752694_x_at",183.99367,178.68669,185.83218,179.14096,180.68567,183.34187,0.015647411,-0.026576519,0.029991627,-0.022913933,-0.010527134,0.010527134,0.80601573,0.51441735,1.0097458,0.013992197,1.0097458,"up","PRR11",55771.0,"","","","chr17:57233117-57281195 (+) // 73.42 // q22"]
["11716637_at",1522.1317,1535.4897,1565.9387,1520.97,1549.7864,1489.2694,-0.0063028336,0.0063028336,0.03463173,-0.0074043274,0.019673347,-0.037791252,0.7289982,0.38428706,1.0139955,0.02005129,1.0139955,"up","EMC7",56851.0,"","0005737 // cytoplasm // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation /// 0072546 // ER membrane protein complex // inferred from direct assay","0004180 // carboxypeptidase activity // inferred from electronic annotation /// 0017076 // purine nucleotide binding // non-traceable author statement /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr15:34376217-34394149 (-) // 96.98 // q14"]
["11723720_at",25.836555,25.508825,24.687838,21.046755,25.049938,21.291584,0.055109978,0.03669262,-0.010503292,-0.24070597,0.010503292,-0.22402048,0.45682687,0.099100545,1.1317124,0.17850742,1.1317124,"up","SLAIN2",57606.0,"0007020 // microtubule nucleation // inferred from mutant phenotype /// 0031113 // regulation of microtubule polymerization // inferred from electronic annotation /// 0031116 // positive regulation of microtubule polymerization // inferred from mutant phenotype /// 0031122 // cytoplasmic microtubule organization // inferred from mutant phenotype /// 0031122 // cytoplasmic microtubule organization // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0035371 // microtubule plus end // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr4:48342960-48428218 (+) // 98.62 // p11"]
["11740340_at",23.736143,25.009188,29.328382,28.27139,27.547012,25.63863,-0.16302204,-0.087649345,0.14218998,0.089235306,0.05178833,-0.05178833,0.82407016,0.5497236,-1.0467417,-0.06590551,1.0467417,"down","F2RL3",9002.0,"0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007200 // phospholipase C-activating G-protein coupled receptor signaling pathway // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0007596 // blood coagulation // inferred from electronic annotation /// 0007599 // hemostasis // inferred from electronic annotation /// 0009611 // response to wounding // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0051281 // positive regulation of release of sequestered calcium ion into cytosol // inferred from direct assay /// 0060155 // platelet dense granule organization // inferred by curator /// 0070493 // thrombin receptor signaling pathway // traceable author statement /// 0070493 // thrombin receptor signaling pathway // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0015057 // thrombin receptor activity // inferred from electronic annotation /// 0015057 // thrombin receptor activity // traceable author statement","chr19:16999670-17009516 (+) // 59.58 // p13.11"]
["11747057_at",19.277596,19.98949,16.314953,19.035894,22.707243,17.39964,0.009101391,0.061418056,-0.2316289,-0.009101391,0.2453289,-0.13876629,0.8387581,0.5828791,-1.0615631,-0.08619017,1.0615631,"down","LOC100130539",1.00130539E8,"","","","chr10:44788197-44790179 (+) // 71.22 // q11.21"]
["11757203_at",7.791387,8.360881,8.080467,8.691557,8.948547,7.999392,-0.077166796,0.024608135,-0.024608135,0.08056784,0.122606516,-0.039156437,0.61437887,0.2290099,-1.0573074,-0.080394834,1.0573074,"down","RP11-165H20.1",149620.0,"","","","chr1:111823145-111828730 (+) // 90.51 // p13.2"]
["11762970_at",8.481829,9.296749,8.527204,8.453733,10.194564,9.184883,-0.061291695,0.07105923,-0.05359435,-0.066078424,0.20406103,0.05359435,0.75820214,0.42845687,-1.0558962,-0.078467965,1.0558962,"down",-0.066078424,0.20406103,0.05359435,-0.061291695,0.07105923,-0.05359435]
["11748711_a_at",553.6737,547.33093,561.17804,510.42862,528.293,510.47385,0.042160034,0.02553749,0.061582565,-0.0751667,-0.02553749,-0.07503891,0.16985813,0.0064902576,1.0730181,0.10167438,1.0730181,"up","EIF4G3",8672.0,"0001934 // positive regulation of protein phosphorylation // inferred from electronic annotation /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006446 // regulation of translational initiation // traceable author statement /// 0007128 // meiotic prophase I // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0016070 // RNA metabolic process // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045727 // positive regulation of translation // inferred from electronic annotation","0005829 // cytosol // traceable author statement /// 0016281 // eukaryotic translation initiation factor 4F complex // traceable author statement","0000339 // RNA cap binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0008135 // translation factor activity, nucleic acid binding // traceable author statement","chr1:21133740-21296462 (-) // 96.55 // p36.12"]
["11715289_s_at",24.241285,22.005548,22.466919,25.419367,22.963205,24.601887,0.039071083,-0.10052776,-0.07059288,0.10753298,-0.039071083,0.060373783,0.6102348,0.22435889,-1.062131,-0.086961776,1.062131,"down","AGRP",181.0,"0007218 // neuropeptide signaling pathway // inferred from direct assay /// 0007218 // neuropeptide signaling pathway // inferred from electronic annotation /// 0007218 // neuropeptide signaling pathway // traceable author statement /// 0007631 // feeding behavior // traceable author statement /// 0008343 // adult feeding behavior // inferred from electronic annotation /// 0009755 // hormone-mediated signaling pathway // inferred from electronic annotation /// 0060259 // regulation of feeding behavior // inferred from direct assay","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005796 // Golgi lumen // inferred from direct assay /// 0005796 // Golgi lumen // inferred from electronic annotation","0005102 // receptor binding // traceable author statement /// 0005184 // neuropeptide hormone activity // inferred from direct assay /// 0005184 // neuropeptide hormone activity // inferred from electronic annotation /// 0005184 // neuropeptide hormone activity // traceable author statement","chr16:67516473-67517304 (-) // 96.09 // q22.1"]
["11730392_at",43.898304,42.994232,36.998528,33.750088,38.823742,36.694855,0.21196175,0.1819396,-0.03473568,-0.16731215,0.03473568,-0.046625614,0.5178072,0.13916166,1.1324568,0.17945598,1.1324568,"up","GPR4",2828.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement","chr19:46093021-46105466 (-) // 84.3 // q13.32"]
["11724261_a_at",44.04729,45.321236,41.32908,40.161285,42.690018,38.44695,0.068525314,0.109659195,-0.023370743,-0.06472254,0.023370743,-0.12765884,0.51946056,0.14060508,1.0776894,0.10794145,1.0776894,"up","TRIO",7204.0,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0007185 // transmembrane receptor protein tyrosine phosphatase signaling pathway // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0005085 // guanyl-nucleotide exchange factor activity // traceable author statement /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr5:14143810-14509520 (+) // 97.2 // p15.2"]
["11750884_a_at",242.37071,235.46289,238.87407,221.45111,220.57533,221.15414,0.085971355,0.044255257,0.065006256,-0.044255733,-0.049972534,-0.046191692,0.08459432,7.7483425E-4,1.0806388,0.11188434,1.0806388,"up","AKAP8L",26993.0,"0016310 // phosphorylation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016363 // nuclear matrix // inferred from direct assay /// 0016363 // nuclear matrix // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0017151 // DEAD/H-box RNA helicase binding // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:15490861-15529837 (-) // 98.5 // p13.12"]
["11754116_x_at",10.543514,9.292872,9.68825,8.668931,9.879324,9.309155,0.15084076,-0.031318426,0.028792858,-0.13158917,0.056969166,-0.028793097,0.6961846,0.33395344,1.0598862,0.08390939,1.0598862,"up","S100B",6285.0,"0007409 // axonogenesis // traceable author statement /// 0007417 // central nervous system development // traceable author statement /// 0007611 // learning or memory // inferred from sequence or structural similarity /// 0007611 // learning or memory // inferred from electronic annotation /// 0007613 // memory // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from direct assay /// 0045087 // innate immune response // traceable author statement /// 0048168 // regulation of neuronal synaptic plasticity // inferred from electronic annotation","0001726 // ruffle // inferred from direct assay /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0005102 // receptor binding // inferred from electronic annotation /// 0005509 // calcium ion binding // non-traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005509 // calcium ion binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from sequence or structural similarity /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0044548 // S100 protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0048156 // tau protein binding // inferred from sequence or structural similarity /// 0048306 // calcium-dependent protein binding // inferred from direct assay /// 0050786 // RAGE receptor binding // inferred from physical interaction","chr21:48019287-48024977 (-) // 63.37 // q22.3"]
["11723098_a_at",7.067718,7.057902,7.0852294,7.44751,6.9596467,6.831258,0.0010025501,-0.0010025501,0.00457263,0.07651615,-0.021227837,-0.048090696,0.9947212,0.98268497,-1.0006067,-8.7495433E-4,1.0006067,"down","VTCN1",79679.0,"0050868 // negative regulation of T cell activation // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005102 // receptor binding // inferred from electronic annotation","chr1:117686209-117753582 (-) // 87.14 // p13.1"]
["11748401_x_at",882.9233,900.87415,891.6478,843.3741,882.90106,868.24023,1.8119812E-5,0.029055595,0.014204025,-0.06609726,-1.8119812E-5,-0.024175644,0.4612987,0.10185087,1.031342,0.04452286,1.031342,"up","TPM4",7171.0,"0006928 // cellular component movement // traceable author statement /// 0006936 // muscle contraction // traceable author statement /// 0006979 // response to oxidative stress // inferred from expression pattern /// 0030049 // muscle filament sliding // traceable author statement","0001725 // stress fiber // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005862 // muscle thin filament tropomyosin // traceable author statement","0003779 // actin binding // inferred from electronic annotation /// 0005509 // calcium ion binding // non-traceable author statement /// 0008307 // structural constituent of muscle // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:16187304-16212764 (+) // 99.78 // p13.12"]
["11734319_a_at",11.432446,11.366431,10.287969,11.619115,10.775069,11.239935,0.016427517,0.008072615,-0.13574862,0.039793253,-0.06900954,-0.008072853,0.8893534,0.69546175,-1.017235,-0.024653064,1.017235,"down","SLC17A4",10050.0,"0006796 // phosphate-containing compound metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // traceable author statement /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005436 // sodium:phosphate symporter activity // traceable author statement /// 0015293 // symporter activity // inferred from electronic annotation","chr6:25754964-25781454 (+) // 86.64 // p22.2"]
["11718617_a_at",320.8398,328.62103,327.61203,306.40427,310.64117,290.52203,0.023302078,0.057873726,0.053437233,-0.043114662,-0.023302078,-0.119903564,0.28743804,0.027095672,1.0769697,0.106977716,1.0769697,"up","DNAJA4",55466.0,"0006457 // protein folding // inferred from electronic annotation /// 0009408 // response to heat // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation","0005524 // ATP binding // inferred from electronic annotation /// 0031072 // heat shock protein binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // inferred from electronic annotation","chr15:78556427-78574538 (+) // 99.27 // q25.1"]
["11737511_a_at",10.413606,11.621568,11.263486,12.458412,9.825031,10.613728,-0.07032275,0.08801246,0.042860985,0.18832779,-0.15425849,-0.042860985,0.94926846,0.84568393,1.0161505,0.023114055,1.0161505,"up","SP100",6672.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006978 // DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator // inferred from direct assay /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0032526 // response to retinoic acid // inferred from direct assay /// 0032897 // negative regulation of viral transcription // inferred from direct assay /// 0034097 // response to cytokine stimulus // inferred from direct assay /// 0034340 // response to type I interferon // inferred from direct assay /// 0034340 // response to type I interferon // inferred from mutant phenotype /// 0034341 // response to interferon-gamma // inferred from direct assay /// 0034341 // response to interferon-gamma // inferred from mutant phenotype /// 0043392 // negative regulation of DNA binding // inferred from direct assay /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0048384 // retinoic acid receptor signaling pathway // inferred by curator /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0051271 // negative regulation of cellular component movement // inferred from mutant phenotype /// 0060333 // interferon-gamma-mediated signaling pathway // inferred by curator /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060337 // type I interferon-mediated signaling pathway // inferred by curator","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from mutant phenotype /// 0005737 // cytoplasm // inferred from direct assay /// 0016605 // PML body // inferred from direct assay /// 0016605 // PML body // inferred from electronic annotation /// 0034399 // nuclear periphery // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0003714 // transcription corepressor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0019900 // kinase binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070087 // chromo shadow domain binding // inferred from physical interaction","chr2:231280870-231408300 (+) // 52.53 // q37.1"]
["11762783_at",11.367857,12.480982,11.355708,9.311744,11.791031,11.715327,-0.021718502,0.11305261,-0.023260832,-0.30955553,0.031011105,0.021718502,0.7527949,0.4205678,1.077957,0.10829967,1.077957,"up","RPL18A",6142.0,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral infectious cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // traceable author statement","chr19:17970729-17974962 (+) // 99.78 // p13.11"]
["11738568_at",21.425749,22.161602,20.109009,22.044786,21.802118,21.768175,-0.023998737,0.024717808,-0.11550236,0.017093182,0.0011239052,-0.0011239052,0.70698994,0.3492067,-1.0309389,-0.04395878,1.0309389,"down","KRTAP5-3",387266.0,"","0005882 // intermediate filament // inferred from electronic annotation /// 0045095 // keratin filament // inferred from electronic annotation","","chr11:1628310-1629693 (-) // 85.36 // p15.5"]
["11753154_a_at",10.188842,9.801003,9.807467,10.125423,9.605427,9.562107,0.055512905,-4.7564507E-4,4.7540665E-4,0.046505213,-0.02955556,-0.036076307,0.79088384,0.4844676,1.0173949,0.024879767,1.0173949,"up","LHFPL1",340596.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chrX:111874276-111923274 (-) // 100.0 // q23"]
["11753258_s_at",331.87396,333.279,334.77737,366.99463,358.57562,356.99054,-0.058908463,-0.05281353,-0.046341896,0.08621502,0.05273342,0.046341896,0.086976536,8.876576E-4,-1.0825633,-0.114451356,1.0825633,"down","EGFL8 /// PPT2 /// PPT2-EGFL8","100532746 /// 80864 /// 9374","0001701 // in utero embryonic development // inferred from sequence or structural similarity /// 0006464 // cellular protein modification process // non-traceable author statement /// 0006464 // cellular protein modification process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005764 // lysosome // non-traceable author statement /// 0005764 // lysosome // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0016021 // integral to membrane // non-traceable author statement","0005509 // calcium ion binding // inferred from electronic annotation /// 0008474 // palmitoyl-(protein) hydrolase activity // non-traceable author statement /// 0008474 // palmitoyl-(protein) hydrolase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016790 // thiolester hydrolase activity // non-traceable author statement","chr6:32121846-32134009 (+) // 99.62 // p21.32"]
["11728877_s_at",88.568504,88.305115,78.14216,79.7073,80.4288,83.09869,0.11552429,0.111228466,-0.065167904,-0.036557198,-0.02355671,0.023556232,0.70670474,0.34860954,1.0468447,0.06604746,1.0468447,"up","ARID1B",57492.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0048096 // chromatin-mediated maintenance of transcription // non-traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0016514 // SWI/SNF complex // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from direct assay /// 0003713 // transcription coactivator activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr6:157099085-157530396 (+) // 91.62 // q25.3"]
["11759126_a_at",354.4845,368.70892,337.0632,340.67007,340.45395,331.33145,0.05780506,0.114564896,-0.0148983,4.5776367E-4,-4.5776367E-4,-0.039642334,0.55875736,0.17351513,1.046596,0.06570472,1.046596,"up","THRA",7067.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006366 // transcription from RNA polymerase II promoter // inferred from direct assay /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0007623 // circadian rhythm // inferred from electronic annotation /// 0009755 // hormone-mediated signaling pathway // inferred from direct assay /// 0010467 // gene expression // traceable author statement /// 0010871 // negative regulation of receptor biosynthetic process // inferred from mutant phenotype /// 0017055 // negative regulation of RNA polymerase II transcriptional preinitiation complex assembly // inferred from direct assay /// 0030522 // intracellular receptor mediated signaling pathway // traceable author statement /// 0034144 // negative regulation of toll-like receptor 4 signaling pathway // inferred from mutant phenotype /// 0043401 // steroid hormone mediated signaling pathway // inferred from electronic annotation /// 0043401 // steroid hormone mediated signaling pathway // traceable author statement /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0071222 // cellular response to lipopolysaccharide // inferred from mutant phenotype /// 2000143 // negative regulation of transcription initiation, DNA-dependent // inferred from direct assay /// 2000189 // positive regulation of cholesterol homeostasis // inferred from direct assay","0000790 // nuclear chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005829 // cytosol // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003707 // steroid hormone receptor activity // inferred from electronic annotation /// 0003707 // steroid hormone receptor activity // traceable author statement /// 0003714 // transcription corepressor activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0004879 // ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity // traceable author statement /// 0004887 // thyroid hormone receptor activity // inferred from direct assay /// 0004887 // thyroid hormone receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0017025 // TBP-class protein binding // inferred from direct assay /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070324 // thyroid hormone binding // inferred from direct assay /// 0070324 // thyroid hormone binding // inferred from physical interaction","chr17:38219062-38249110 (+) // 97.76 // q21.1"]
["11726358_a_at",222.71046,200.08878,218.42363,216.83885,185.04932,209.52173,0.063307285,-0.091220856,0.035267353,0.024762154,-0.20395136,-0.024761677,0.7697247,0.44979832,1.0500332,0.07043496,1.0500332,"up","MLL5",55904.0,"0002446 // neutrophil mediated immunity // inferred from sequence or structural similarity /// 0002446 // neutrophil mediated immunity // inferred from electronic annotation /// 0006306 // DNA methylation // inferred from sequence or structural similarity /// 0006306 // DNA methylation // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0030218 // erythrocyte differentiation // inferred from sequence or structural similarity /// 0030218 // erythrocyte differentiation // inferred from electronic annotation /// 0030854 // positive regulation of granulocyte differentiation // inferred from mutant phenotype /// 0032259 // methylation // inferred from electronic annotation /// 0034968 // histone lysine methylation // inferred from electronic annotation /// 0042119 // neutrophil activation // inferred from sequence or structural similarity /// 0042119 // neutrophil activation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0048384 // retinoic acid receptor signaling pathway // inferred from mutant phenotype /// 0051568 // histone H3-K4 methylation // inferred from direct assay /// 0071300 // cellular response to retinoic acid // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation /// 0070688 // MLL5-L complex // inferred from direct assay","0003713 // transcription coactivator activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0018024 // histone-lysine N-methyltransferase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0042800 // histone methyltransferase activity (H3-K4 specific) // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:104654630-104754808 (+) // 99.4 // q22.3"]
["11731654_at",8.463334,8.327618,6.9434533,8.463334,7.9929485,7.9718523,0.052910566,0.029588223,-0.2326622,0.052910566,-0.029587984,-0.033400774,0.87047976,0.65141237,-1.032896,-0.046695057,1.032896,"down","ARL15",54622.0,"0007264 // small GTPase mediated signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation","chr5:53180213-53606426 (-) // 90.25 // q11.2"]
["11740827_at",9.0036545,8.70995,9.468156,8.424025,9.33149,8.932564,0.005718231,-0.042128086,0.07829094,-0.09028268,0.057314873,-0.005718231,0.8710695,0.65239835,1.0187893,0.0268557,1.0187893,"up","HES3",390992.0,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0021555 // midbrain-hindbrain boundary morphogenesis // inferred from electronic annotation /// 0021557 // oculomotor nerve development // inferred from electronic annotation /// 0021558 // trochlear nerve development // inferred from electronic annotation /// 0021575 // hindbrain morphogenesis // inferred from electronic annotation /// 0021915 // neural tube development // inferred from electronic annotation /// 0030901 // midbrain development // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0060164 // regulation of timing of neuron differentiation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0008134 // transcription factor binding // non-traceable author statement","chr1:6304253-6305638 (+) // 96.84 // p36.31"]
["11726673_s_at",7.258659,7.2991586,9.459541,8.161721,8.786646,7.0867996,-0.08859873,-0.08057165,0.29346824,0.08057165,0.18701077,-0.123167515,0.99009037,0.9676607,-1.0046588,-0.006705646,1.0046588,"down","ASCL1",429.0,"0001764 // neuron migration // inferred from electronic annotation /// 0003359 // noradrenergic neuron fate commitment // inferred from mutant phenotype /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0007219 // Notch signaling pathway // inferred from direct assay /// 0007219 // Notch signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007389 // pattern specification process // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007400 // neuroblast fate determination // inferred from electronic annotation /// 0007405 // neuroblast proliferation // inferred from electronic annotation /// 0008593 // regulation of Notch signaling pathway // inferred from electronic annotation /// 0010001 // glial cell differentiation // inferred from electronic annotation /// 0010226 // response to lithium ion // inferred from electronic annotation /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0014003 // oligodendrocyte development // inferred from electronic annotation /// 0021527 // spinal cord association neuron differentiation // inferred from electronic annotation /// 0021530 // spinal cord oligodendrocyte cell fate specification // inferred from electronic annotation /// 0021750 // vestibular nucleus development // inferred from electronic annotation /// 0021779 // oligodendrocyte cell fate commitment // inferred from electronic annotation /// 0021879 // forebrain neuron differentiation // inferred from electronic annotation /// 0021892 // cerebral cortex GABAergic interneuron differentiation // inferred from expression pattern /// 0021954 // central nervous system neuron development // inferred from electronic annotation /// 0021987 // cerebral cortex development // inferred from electronic annotation /// 0022008 // neurogenesis // inferred from direct assay /// 0022008 // neurogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0032526 // response to retinoic acid // inferred from expression pattern /// 0032526 // response to retinoic acid // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043525 // positive regulation of neuron apoptotic process // inferred from electronic annotation /// 0045665 // negative regulation of neuron differentiation // inferred from direct assay /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from sequence or structural similarity /// 0045666 // positive regulation of neuron differentiation // inferred from electronic annotation /// 0045747 // positive regulation of Notch signaling pathway // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048485 // sympathetic nervous system development // non-traceable author statement /// 0048663 // neuron fate commitment // inferred from electronic annotation /// 0048665 // neuron fate specification // inferred from electronic annotation /// 0048666 // neuron development // inferred from electronic annotation /// 0048709 // oligodendrocyte differentiation // inferred from electronic annotation /// 0050769 // positive regulation of neurogenesis // inferred from electronic annotation /// 0051593 // response to folic acid // inferred from electronic annotation /// 0060163 // subpallium neuron fate commitment // inferred from electronic annotation /// 0060165 // regulation of timing of subpallium neuron differentiation // inferred from electronic annotation /// 0060166 // olfactory pit development // inferred from electronic annotation /// 0060487 // lung epithelial cell differentiation // non-traceable author statement /// 0061100 // lung neuroendocrine cell differentiation // inferred from electronic annotation /// 0061102 // stomach neuroendocrine cell differentiation // inferred from electronic annotation /// 0061103 // carotid body glomus cell differentiation // inferred from electronic annotation /// 0061104 // adrenal chromaffin cell differentiation // inferred from electronic annotation /// 0070849 // response to epidermal growth factor stimulus // inferred from electronic annotation /// 0071259 // cellular response to magnetism // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation","0000989 // transcription factor binding transcription factor activity // inferred from sequence or structural similarity /// 0003677 // DNA binding // inferred from sequence or structural similarity /// 0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0043425 // bHLH transcription factor binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0070888 // E-box binding // inferred from direct assay","chr12:103351421-103354291 (+) // 93.85 // q23.2"]
["11726507_a_at",36.085648,40.737694,32.831673,30.804686,37.599167,37.064217,-0.019300938,0.15563822,-0.15563774,-0.24757624,0.03997469,0.019300938,0.8858594,0.6853013,1.0398197,0.056333415,1.0398197,"up","CDKN2B",1030.0,"0000079 // regulation of cyclin-dependent protein kinase activity // inferred from direct assay /// 0000080 // G1 phase of mitotic cell cycle // traceable author statement /// 0000086 // G2/M transition of mitotic cell cycle // inferred from mutant phenotype /// 0000278 // mitotic cell cycle // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from mutant phenotype /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030219 // megakaryocyte differentiation // inferred from expression pattern /// 0030511 // positive regulation of transforming growth factor beta receptor signaling pathway // inferred from mutant phenotype /// 0030858 // positive regulation of epithelial cell differentiation // inferred from electronic annotation /// 0031575 // mitotic cell cycle G1/S transition checkpoint // inferred from mutant phenotype /// 0031668 // cellular response to extracellular stimulus // inferred from mutant phenotype /// 0031670 // cellular response to nutrient // inferred from mutant phenotype /// 0034097 // response to cytokine stimulus // inferred from electronic annotation /// 0042326 // negative regulation of phosphorylation // inferred from direct assay /// 0050680 // negative regulation of epithelial cell proliferation // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0004861 // cyclin-dependent protein kinase inhibitor activity // inferred from direct assay /// 0004861 // cyclin-dependent protein kinase inhibitor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016301 // kinase activity // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction","chr9:22002897-22009312 (-) // 92.18 // p21.3"]
["11754200_a_at",85.3083,80.77227,87.04064,76.73492,75.05958,80.77227,0.07882643,0.0,0.10782957,-0.07397652,-0.10582352,0.0,0.36845154,0.05311997,1.0883571,0.122151986,1.0883571,"up","CREBBP",1387.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0001666 // response to hypoxia // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006461 // protein complex assembly // traceable author statement /// 0007165 // signal transduction // non-traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007219 // Notch signaling pathway // traceable author statement /// 0008283 // cell proliferation // inferred from electronic annotation /// 0008589 // regulation of smoothened signaling pathway // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016573 // histone acetylation // inferred from direct assay /// 0016573 // histone acetylation // inferred from electronic annotation /// 0018076 // N-terminal peptidyl-lysine acetylation // inferred from direct assay /// 0030718 // germ-line stem cell maintenance // inferred from electronic annotation /// 0033261 // regulation of S phase // inferred from electronic annotation /// 0042592 // homeostatic process // non-traceable author statement /// 0042733 // embryonic digit morphogenesis // traceable author statement /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0000123 // histone acetyltransferase complex // inferred from electronic annotation /// 0000790 // nuclear chromatin // inferred from direct assay /// 0000940 // condensed chromosome outer kinetochore // inferred from electronic annotation /// 0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0016604 // nuclear body // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation","0000987 // core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0001078 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription // inferred from direct assay /// 0001085 // RNA polymerase II transcription factor binding // inferred from physical interaction /// 0001102 // RNA polymerase II activating transcription factor binding // traceable author statement /// 0001105 // RNA polymerase II transcription coactivator activity // traceable author statement /// 0001191 // RNA polymerase II transcription factor binding transcription factor activity involved in negative regulation of transcription // inferred from direct assay /// 0002039 // p53 binding // inferred from physical interaction /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003712 // transcription cofactor activity // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from physical interaction /// 0003713 // transcription coactivator activity // traceable author statement /// 0004402 // histone acetyltransferase activity // inferred from direct assay /// 0004402 // histone acetyltransferase activity // inferred from electronic annotation /// 0004871 // signal transducer activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016407 // acetyltransferase activity // inferred from direct assay /// 0016407 // acetyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0042975 // peroxisome proliferator activated receptor binding // inferred from electronic annotation /// 0043426 // MRF binding // inferred from direct assay /// 0046332 // SMAD binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:3776568-3930711 (-) // 96.55 // p13.3"]
["11734372_at",36.66519,40.566956,36.146225,39.931744,33.132633,38.999214,-0.04451704,0.10137701,-0.06508303,0.078608036,-0.19067526,0.04451704,0.9511379,0.852234,1.0138018,0.01977565,1.0138018,"up","MBLAC1",255374.0,"","","0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:99724319-99726123 (+) // 90.38 // q22.1"]
["11749484_a_at",7.0047064,6.7232447,8.0009575,8.60413,7.2884955,7.568589,-0.08449817,-0.14366508,0.10734987,0.21220636,-0.027201653,0.027201653,0.70698994,0.3493546,-1.0799814,-0.11100653,1.0799814,"down","AXDND1",126859.0,"","","","chr1:179334875-179460786 (+) // 94.59 // q25.2"]
["11726396_x_at",7.579316,7.237353,6.927239,7.0590997,6.4306717,7.226828,0.08564448,0.019038677,-0.04414296,-0.016939163,-0.15145397,0.016939163,0.6924087,0.3289975,1.0502005,0.07066473,1.0502005,"up","KAL1",3730.0,"0006928 // cellular component movement // traceable author statement /// 0006935 // chemotaxis // traceable author statement /// 0006935 // chemotaxis // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0010466 // negative regulation of peptidase activity // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // traceable author statement /// 0005615 // extracellular space // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0005201 // extracellular matrix structural constituent // traceable author statement /// 0008201 // heparin binding // inferred from electronic annotation /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation","chrX:8496915-8700228 (-) // 92.89 // p22.31"]
["11730793_a_at",12.725051,11.151111,12.468332,12.293465,12.453054,12.21158,0.040476084,-0.1500082,0.011072874,-0.009304047,0.009304047,-0.018945694,0.88383573,0.6804419,-1.0185413,-0.026504532,1.0185413,"down","MRPL4",51073.0,"0006412 // translation // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005840 // ribosome // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003735 // structural constituent of ribosome // inferred from electronic annotation","chr19:10362635-10370733 (+) // 78.28 // p13.2"]
["11720741_a_at",61.703274,57.20504,62.60804,61.87779,60.131596,52.70797,0.018611908,-0.09059334,0.03961277,0.022686481,-0.018612385,-0.20871401,0.80962247,0.52181476,1.0406059,0.057423797,1.0406059,"up","ZNF605",1.00289635E8,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:133497860-133532892 (-) // 66.82 // q24.33"]
["11762500_at",12.167024,14.945986,14.842764,14.174199,15.129821,15.816949,-0.29178286,0.0049991608,-0.004999399,-0.07149148,0.022635937,0.0867126,0.7165076,0.36491916,-1.0791385,-0.10988006,1.0791385,"down","WWC1",23286.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016477 // cell migration // inferred from direct assay /// 0035329 // hippo signaling cascade // traceable author statement /// 0035330 // regulation of hippo signaling cascade // inferred from mutant phenotype /// 0043410 // positive regulation of MAPK cascade // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from direct assay /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0003713 // transcription coactivator activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction","chr5:167841076-167843527 (+) // 66.93 // q34"]
["11756966_a_at",6.069963,6.9833293,7.566263,7.423045,7.360279,7.101399,-0.25224423,-0.05001688,0.06564903,0.03807926,0.0258286,-0.025828838,0.7322786,0.38942647,-1.0655245,-0.09156371,1.0655245,"down","FAM194A",131831.0,"","","","chr3:150377676-150400106 (-) // 73.93 // q25.1"]
["11722595_a_at",452.11,448.5408,450.68964,462.47986,466.47592,453.64514,-0.002445221,-0.013879776,-0.0069847107,0.03027153,0.0426836,0.002445221,0.37594876,0.05616969,-1.0230689,-0.032903314,1.0230689,"down","AKAP13",11214.0,"0006915 // apoptotic process // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005624 // membrane fraction // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0004691 // cAMP-dependent protein kinase activity // non-traceable author statement /// 0004871 // signal transducer activity // traceable author statement /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr15:85923832-86292586 (+) // 98.27 // q25.3"]
["11742364_at",17.82482,18.94348,15.596857,19.05998,18.468832,20.10685,-0.069509506,0.018304348,-0.2621417,0.027149677,-0.018304348,0.10429001,0.5760059,0.1902178,-1.1035566,-0.14216067,1.1035566,"down","OR5AR1",219493.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr11:56431137-56432163 (+) // 100.0 // q12.1"]
["11718080_a_at",184.52162,166.8839,153.03967,173.47069,165.93347,178.17592,0.11702156,-0.02792406,-0.15286255,0.027923584,-0.03616333,0.066533566,0.870596,0.6516976,-1.028603,-0.040686205,1.028603,"down","BCL2L11",10018.0,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0001776 // leukocyte homeostasis // inferred from electronic annotation /// 0001782 // B cell homeostasis // inferred from electronic annotation /// 0001783 // B cell apoptotic process // inferred from electronic annotation /// 0001822 // kidney development // inferred from electronic annotation /// 0002260 // lymphocyte homeostasis // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from direct assay /// 0006917 // induction of apoptosis // traceable author statement /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0007160 // cell-matrix adhesion // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0008584 // male gonad development // inferred from electronic annotation /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0008629 // induction of apoptosis by intracellular signals // traceable author statement /// 0008633 // activation of pro-apoptotic gene products // traceable author statement /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0030879 // mammary gland development // inferred from electronic annotation /// 0032464 // positive regulation of protein homooligomerization // inferred from direct assay /// 0035148 // tube formation // inferred from electronic annotation /// 0042475 // odontogenesis of dentin-containing tooth // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043029 // T cell homeostasis // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043525 // positive regulation of neuron apoptotic process // inferred from electronic annotation /// 0043583 // ear development // inferred from electronic annotation /// 0045787 // positive regulation of cell cycle // inferred from electronic annotation /// 0046620 // regulation of organ growth // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048066 // developmental pigmentation // inferred from electronic annotation /// 0048070 // regulation of developmental pigmentation // inferred from electronic annotation /// 0048536 // spleen development // inferred from electronic annotation /// 0048538 // thymus development // inferred from electronic annotation /// 0048563 // post-embryonic organ morphogenesis // inferred from electronic annotation /// 0060154 // cellular process regulating host cell cycle in response to virus // inferred from electronic annotation /// 0090200 // positive regulation of release of cytochrome c from mitochondria // inferred from genetic interaction /// 0090200 // positive regulation of release of cytochrome c from mitochondria // inferred from mutant phenotype /// 2001244 // positive regulation of intrinsic apoptotic signaling pathway // inferred from mutant phenotype","0000300 // peripheral to membrane of membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // traceable author statement /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005874 // microtubule // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation /// 0097140 // BIM-BCL-xl complex // inferred from direct assay /// 0097141 // BIM-BCL-2 complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // inferred from direct assay /// 0008017 // microtubule binding // inferred from electronic annotation","chr2:111878490-111926021 (+) // 97.66 // q13"]
["11728554_at",77.540665,79.912895,78.80633,82.36973,77.20731,76.95303,-0.0116791725,0.03179598,0.0116791725,0.07548237,-0.017894745,-0.022654057,0.9932431,0.97715527,-1.0007252,-0.0010457913,1.0007252,"down","ATP6V1E2 /// FLJ41757","440862 /// 90423","0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0015991 // ATP hydrolysis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport // inferred from electronic annotation /// 0033572 // transferrin transport // traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0001669 // acrosomal vesicle // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0033178 // proton-transporting two-sector ATPase complex, catalytic domain // inferred from electronic annotation","0008553 // hydrogen-exporting ATPase activity, phosphorylative mechanism // inferred from electronic annotation /// 0046961 // proton-transporting ATPase activity, rotational mechanism // inferred from electronic annotation","chr2:46738985-46747176 (-) // 68.68 // p21"]
["11737957_a_at",85.1707,96.87401,79.747696,87.52599,94.04419,96.87401,-0.0911684,0.09458494,-0.18608284,-0.051813602,0.051813602,0.09458494,0.72454566,0.37743428,-1.066155,-0.092417136,1.066155,"down","DUSP15",128853.0,"0006470 // protein dephosphorylation // not recorded /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008138 // protein tyrosine/serine/threonine phosphatase activity // not recorded /// 0008138 // protein tyrosine/serine/threonine phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation","chr20:30448879-30458547 (-) // 96.85 // q11.21"]
["11721231_a_at",63.635536,68.874016,59.10226,79.54068,78.065956,77.71722,-0.20126438,-0.08713722,-0.30788326,0.120595455,0.09359646,0.08713722,0.19540504,0.009771241,-1.2304659,-0.29920465,1.2304659,"down","METTL21D",79609.0,"0032259 // methylation // inferred from electronic annotation","","0008168 // methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr14:50575354-50583318 (-) // 98.2 // q21.3"]
["11755527_x_at",178.94734,180.55809,182.10918,183.5407,177.37405,192.2087,-0.019098759,-0.006170273,0.006170273,0.017466068,-0.031838417,0.084040165,0.7629728,0.43769827,-1.0207212,-0.029588858,1.0207212,"down","PRPSAP2",5636.0,"0006139 // nucleobase-containing compound metabolic process // traceable author statement /// 0009165 // nucleotide biosynthetic process // inferred from electronic annotation /// 0043086 // negative regulation of catalytic activity // traceable author statement","0043234 // protein complex // inferred from electronic annotation","0000287 // magnesium ion binding // inferred from electronic annotation /// 0004749 // ribose phosphate diphosphokinase activity // inferred from electronic annotation /// 0004857 // enzyme inhibitor activity // traceable author statement","chr17:18759611-18834524 (+) // 95.54 // p11.2"]
["11729333_at",35.106438,40.820312,29.43829,40.078247,35.184708,44.09339,-0.09714842,0.12040329,-0.3511901,0.09393549,-0.09393549,0.23167849,0.6881112,0.3233884,-1.1380295,-0.18653789,1.1380295,"down","PADI1",29943.0,"0006464 // cellular protein modification process // inferred from electronic annotation /// 0018101 // peptidyl-citrulline biosynthetic process from peptidyl-arginine // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0004668 // protein-arginine deiminase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr1:17531289-17572502 (+) // 99.31 // p36.13"]
["11763951_at",42.27763,37.741753,34.47541,35.023304,39.153595,37.90843,0.16055441,-0.0031785965,-0.13377237,-0.11102486,0.049804688,0.0031785965,0.93106043,0.79425234,1.0190431,0.027215054,1.0190431,"up","LINC00235",64493.0,"","","","chr16:576846-577407 (+) // 100.0 // p13.3"]
["11726044_a_at",56.102856,46.405853,41.53589,49.5711,46.405853,45.15258,0.27376747,0.0,-0.15994835,0.09519243,0.0,-0.03949833,0.964301,0.89105356,1.0135204,0.01937507,1.0135204,"up","AGER",177.0,"0006954 // inflammatory response // inferred from electronic annotation /// 0006954 // inflammatory response // traceable author statement /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0007259 // JAK-STAT cascade // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0009611 // response to wounding // traceable author statement /// 0010763 // positive regulation of fibroblast migration // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from genetic interaction /// 0031175 // neuron projection development // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from electronic annotation /// 0050729 // positive regulation of inflammatory response // inferred from electronic annotation /// 0050930 // induction of positive chemotaxis // inferred from electronic annotation /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0055074 // calcium ion homeostasis // inferred from electronic annotation /// 0055093 // response to hyperoxia // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // non-traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0009925 // basal plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004872 // receptor activity // traceable author statement /// 0004888 // transmembrane signaling receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0044548 // S100 protein binding // inferred from physical interaction /// 0050785 // advanced glycation end-product receptor activity // inferred from electronic annotation","chr6:32148746-32152517 (-) // 88.71 // p21.32"]
["11752814_s_at",185.73952,192.1514,199.76016,186.85432,189.54195,183.26396,-0.018935204,0.03002739,0.08605242,-0.01030159,0.010301113,-0.038292885,0.6302362,0.24833055,1.0317876,0.04514606,1.0317876,"up","TNFRSF1A",7132.0,"0001666 // response to hypoxia // inferred from electronic annotation /// 0006693 // prostaglandin metabolic process // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006952 // defense response // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from sequence or structural similarity /// 0006954 // inflammatory response // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0009611 // response to wounding // inferred from electronic annotation /// 0009812 // flavonoid metabolic process // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0010629 // negative regulation of gene expression // inferred from electronic annotation /// 0016101 // diterpenoid metabolic process // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // inferred from sequence or structural similarity /// 0019221 // cytokine-mediated signaling pathway // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0032715 // negative regulation of interleukin-6 production // inferred from electronic annotation /// 0032760 // positive regulation of tumor necrosis factor production // inferred from electronic annotation /// 0033013 // tetrapyrrole metabolic process // inferred from electronic annotation /// 0033160 // positive regulation of protein import into nucleus, translocation // inferred from electronic annotation /// 0033209 // tumor necrosis factor-mediated signaling pathway // traceable author statement /// 0033209 // tumor necrosis factor-mediated signaling pathway // inferred from electronic annotation /// 0042511 // positive regulation of tyrosine phosphorylation of Stat1 protein // inferred from mutant phenotype /// 0042742 // defense response to bacterium // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from expression pattern /// 0043200 // response to amino acid stimulus // inferred from electronic annotation /// 0043279 // response to alkaloid // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045471 // response to ethanol // inferred from electronic annotation /// 0045766 // positive regulation of angiogenesis // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0050728 // negative regulation of inflammatory response // inferred from mutant phenotype /// 0050729 // positive regulation of inflammatory response // inferred from sequence or structural similarity /// 0050729 // positive regulation of inflammatory response // inferred from electronic annotation /// 0071260 // cellular response to mechanical stimulus // inferred from expression pattern /// 0071392 // cellular response to estradiol stimulus // inferred from electronic annotation","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0045121 // membrane raft // inferred from direct assay /// 0045121 // membrane raft // inferred from electronic annotation","0002020 // protease binding // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005031 // tumor necrosis factor-activated receptor activity // traceable author statement /// 0005031 // tumor necrosis factor-activated receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0043120 // tumor necrosis factor binding // inferred from electronic annotation","chr12:6438310-6451170 (-) // 91.84 // p13.31"]
["11734315_a_at",6.756318,6.9081335,7.448236,7.497556,6.9897523,7.100174,-0.060310602,-0.028251886,0.080350876,0.0898726,-0.011306524,0.011306524,0.8321909,0.5668782,-1.022921,-0.032694682,1.022921,"down","KIAA1456",57604.0,"0008152 // metabolic process // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation","","0008168 // methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr8:12803182-12887286 (+) // 80.04 // p22"]
["11733572_at",6.598461,6.1459236,5.3073535,5.6165123,5.5923853,5.921211,0.19434619,0.091846466,-0.119790554,-0.038108826,-0.04431963,0.038108826,0.80068046,0.50580895,1.0498917,0.07024053,1.0498917,"up","DMRT3",58524.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007548 // sex differentiation // non-traceable author statement /// 0007548 // sex differentiation // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:976963-991732 (+) // 94.19 // p24.3"]
["11716953_at",3039.7368,3045.441,2999.5046,2989.2117,3028.345,3075.2434,0.002708435,0.005414009,-0.016513824,-0.02147293,-0.002708435,0.019462585,0.97951907,0.9330792,-1.0008489,-0.0012241689,1.0008489,"down","TMEM126A",84233.0,"0021554 // optic nerve development // inferred from mutant phenotype","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr11:85358962-85367586 (+) // 93.94 // q14.1"]
["11717321_at",164.23227,176.14165,153.00827,191.62549,174.68365,176.21199,-0.09500265,0.0059957504,-0.19713116,0.1275487,-0.0059957504,0.006571293,0.50349253,0.12940115,-1.1004453,-0.13808739,1.1004453,"down","OAF",220323.0,"","","","chr11:120081474-120101039 (+) // 87.07 // q23.3"]
["11760525_at",26.180532,25.023558,29.202694,23.734526,24.00686,24.11162,0.091986656,0.026779175,0.24959373,-0.049520493,-0.033061028,-0.026779175,0.416024,0.07475198,1.1166987,0.15924004,1.1166987,"up","","","","","","chr3:99651964-99654108 (+) // 70.88 // q12.1"]
["11755164_a_at",8.232187,9.835206,8.337254,9.953527,8.823632,8.394371,-0.064121485,0.19255781,-0.045825243,0.2098105,0.035975218,-0.03597498,0.90055394,0.7201573,-1.0298254,-0.042399827,1.0298254,"down","LEFTY1",10637.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0003007 // heart morphogenesis // inferred from sequence or structural similarity /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007368 // determination of left/right symmetry // inferred from sequence or structural similarity /// 0016049 // cell growth // inferred from electronic annotation /// 0040007 // growth // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation","0005125 // cytokine activity // inferred from electronic annotation /// 0005160 // transforming growth factor beta receptor binding // inferred from electronic annotation /// 0008083 // growth factor activity // inferred from electronic annotation","chr1:226073981-226076846 (-) // 98.3 // q42.12"]
["11741841_a_at",13.0938,13.675975,14.404294,13.759092,13.058923,13.32549,-0.044032335,0.018727541,0.09358263,0.027469158,-0.047880173,-0.018727541,0.7856956,0.47464636,1.025129,0.03580541,1.025129,"up","C10orf71",118461.0,"","","","chr10:50507186-50535537 (+) // 98.12 // q11.23"]
["11735679_a_at",132.6734,127.7381,132.89926,133.73943,126.7086,140.8007,-0.0012273788,-0.055916786,0.001226902,0.010318279,-0.06759167,0.084548,0.84387493,0.5923328,-1.0194073,-0.02773055,1.0194073,"down","ACOT8",10005.0,"0006637 // acyl-CoA metabolic process // inferred from electronic annotation /// 0006699 // bile acid biosynthetic process // traceable author statement /// 0007031 // peroxisome organization // inferred from electronic annotation /// 0008206 // bile acid metabolic process // traceable author statement /// 0033540 // fatty acid beta-oxidation using acyl-CoA oxidase // traceable author statement /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005777 // peroxisome // inferred from electronic annotation /// 0005782 // peroxisomal matrix // inferred from direct assay /// 0005782 // peroxisomal matrix // inferred from mutant phenotype /// 0005782 // peroxisomal matrix // traceable author statement","0004091 // carboxylesterase activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0033882 // choloyl-CoA hydrolase activity // inferred from electronic annotation /// 0047617 // acyl-CoA hydrolase activity // inferred from direct assay /// 0047617 // acyl-CoA hydrolase activity // inferred from electronic annotation","chr20:44470360-44486035 (-) // 100.0 // q13.12"]
["11742545_at",9.175306,8.043897,9.147332,10.846604,9.872971,9.44086,-0.020581007,-0.21044254,-0.024986029,0.22083426,0.08514714,0.020581007,0.43653503,0.08688094,-1.1440822,-0.1941907,1.1440822,"down","OR5R1",219479.0,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr11:56184733-56185708 (-) // 100.0 // q12.1"]
["11761549_at",16.740839,18.900957,19.13636,18.650196,16.97722,16.819433,-0.08802414,0.08706379,0.104920864,0.06779528,-0.06779528,-0.0812664,0.78392637,0.47191685,1.0437255,0.06174232,1.0437255,"up","TMED3",23423.0,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030126 // COPI vesicle coat // inferred from sequence or structural similarity /// 0030663 // COPI coated vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation /// 0033116 // endoplasmic reticulum-Golgi intermediate compartment membrane // inferred from electronic annotation","","chr15:79603486-79606347 (+) // 46.02 // q25.1"]
["11723885_at",14.22604,17.209816,13.525889,13.675977,14.658185,15.153775,-0.02158618,0.25311136,-0.09439683,-0.07847619,0.021586418,0.06955719,0.907428,0.73531157,1.0291741,0.04148704,1.0291741,"up","C17orf103",256302.0,"","","","chr17:21142182-21156722 (-) // 82.25 // p11.2"]
["11729457_a_at",15.063808,18.761242,15.930828,15.556766,16.66013,17.19534,-0.113024,0.20364475,-0.032289267,-0.066568375,0.03228903,0.077907085,0.989336,0.96471614,1.0034031,0.0049012536,1.0034031,"up","BCL6B",255877.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:6926338-6932961 (+) // 97.69 // p13.1"]
["11733224_at",25.053127,21.668856,23.043394,22.231657,21.462646,25.84057,0.14650631,-0.06286144,0.025868893,-0.025868893,-0.07665634,0.19115353,0.98502016,0.94891274,1.0048373,0.0069618872,1.0048373,"up","ZNF71",58491.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:57106647-57135790 (+) // 88.57 // q13.43"]
["11734383_a_at",19.14438,19.353579,18.694736,18.589375,16.94151,17.876745,0.03836584,0.0540452,0.0040769577,-0.0040769577,-0.13799286,-0.060471058,0.41528413,0.07433694,1.071533,0.09967623,1.071533,"up","AQP10",89872.0,"0006810 // transport // inferred from electronic annotation /// 0006833 // water transport // traceable author statement /// 0006833 // water transport // inferred from electronic annotation /// 0009636 // response to toxin // inferred from direct assay /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation","chr1:154293568-154297801 (+) // 99.29 // q21.3"]
["11743466_at",514.06226,511.0549,527.98724,507.90463,512.8058,501.93256,0.005997658,-0.0024671555,0.04455757,-0.011387825,0.0024671555,-0.02845192,0.55337703,0.16932912,1.0199418,0.02848684,1.0199418,"up","MPHOSPH6",10200.0,"0000087 // M phase of mitotic cell cycle // traceable author statement /// 0000460 // maturation of 5.8S rRNA // inferred from mutant phenotype /// 0006364 // rRNA processing // inferred from electronic annotation","0000176 // nuclear exosome (RNase complex) // traceable author statement /// 0000178 // exosome (RNase complex) // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr16:82181766-82203831 (-) // 96.08 // q23.3"]
["11748500_a_at",5.8872266,5.653943,5.5094886,5.6536617,5.86391,5.8845553,0.03202772,-0.026303053,-0.063642025,-0.026374817,0.026302814,0.031373024,0.75528747,0.42361543,-1.0208278,-0.02973948,1.0208278,"down","ENPP5",59084.0,"0007154 // cell communication // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr6:46128730-46138708 (-) // 95.89 // p21.1"]
["11737939_a_at",154.11768,152.2074,152.02835,161.8296,151.72766,167.20738,0.008996487,-0.0089969635,-0.010695457,0.07943964,-0.013551712,0.12660313,0.5641903,0.17927092,-1.0480655,-0.067728944,1.0480655,"down","RIPK1",8737.0,"0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from direct assay /// 0006915 // apoptotic process // traceable author statement /// 0006917 // induction of apoptosis // inferred from mutant phenotype /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007257 // activation of JUN kinase activity // traceable author statement /// 0008063 // Toll signaling pathway // traceable author statement /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0008633 // activation of pro-apoptotic gene products // traceable author statement /// 0010940 // positive regulation of necrotic cell death // inferred from mutant phenotype /// 0016310 // phosphorylation // inferred from electronic annotation /// 0032481 // positive regulation of type I interferon production // traceable author statement /// 0032757 // positive regulation of interleukin-8 production // inferred from direct assay /// 0032760 // positive regulation of tumor necrosis factor production // inferred from direct assay /// 0033209 // tumor necrosis factor-mediated signaling pathway // inferred by curator /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0034612 // response to tumor necrosis factor // inferred from mutant phenotype /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0042327 // positive regulation of phosphorylation // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0043068 // positive regulation of programmed cell death // inferred from mutant phenotype /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from expression pattern /// 0045087 // innate immune response // traceable author statement /// 0045768 // positive regulation of anti-apoptosis // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from mutant phenotype /// 0060545 // positive regulation of necroptosis // inferred from mutant phenotype /// 0060555 // induction of necroptosis by extracellular signals // inferred from mutant phenotype /// 0070926 // regulation of ATP:ADP antiporter activity // inferred from mutant phenotype /// 2000379 // positive regulation of reactive oxygen species metabolic process // traceable author statement /// 2001237 // negative regulation of extrinsic apoptotic signaling pathway // inferred from mutant phenotype /// 2001238 // positive regulation of extrinsic apoptotic signaling pathway // inferred from mutant phenotype /// 2001243 // negative regulation of intrinsic apoptotic signaling pathway // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0010008 // endosome membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0031264 // death-inducing signaling complex // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation /// 0043235 // receptor complex // inferred from direct assay /// 0045121 // membrane raft // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005123 // death receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0070513 // death domain binding // inferred from physical interaction","chr6:3064121-3115421 (+) // 87.6 // p25.2"]
["11736630_at",33.12047,32.11182,30.64675,31.629234,27.170288,34.861294,0.055541515,0.010922909,-0.056447506,-0.010922909,-0.23015165,0.1294446,0.90485907,0.73011565,1.0285051,0.040548928,1.0285051,"up","BTBD17",388419.0,"","0005576 // extracellular region // inferred from electronic annotation","","chr17:72352554-72357958 (-) // 99.88 // q25.1"]
["11759163_at",8.102694,9.146849,9.579798,9.932425,8.866993,7.490542,-0.15245843,0.022414923,0.08913541,0.1412859,-0.022415161,-0.26578975,0.9371797,0.8111586,1.0247961,0.03533693,1.0247961,"up","CDH23 /// LOC100653137","100653137 /// 64072","0006816 // calcium ion transport // inferred from mutant phenotype /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from electronic annotation /// 0007601 // visual perception // inferred from electronic annotation /// 0007605 // sensory perception of sound // inferred from mutant phenotype /// 0007605 // sensory perception of sound // inferred from electronic annotation /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0016339 // calcium-dependent cell-cell adhesion // non-traceable author statement /// 0042472 // inner ear morphogenesis // inferred from electronic annotation /// 0042491 // auditory receptor cell differentiation // inferred from electronic annotation /// 0045494 // photoreceptor cell maintenance // inferred from mutant phenotype /// 0048563 // post-embryonic organ morphogenesis // inferred from electronic annotation /// 0048839 // inner ear development // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050953 // sensory perception of light stimulus // inferred from mutant phenotype /// 0050953 // sensory perception of light stimulus // inferred from electronic annotation /// 0050957 // equilibrioception // inferred from mutant phenotype /// 0051480 // cytosolic calcium ion homeostasis // inferred from mutant phenotype /// 0060088 // auditory receptor cell stereocilium organization // inferred from electronic annotation","0001917 // photoreceptor inner segment // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0005932 // microtubule basal body // inferred from electronic annotation /// 0016020 // membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0032420 // stereocilium // inferred from sequence or structural similarity /// 0032420 // stereocilium // inferred from electronic annotation /// 0032426 // stereocilium bundle tip // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr10:73156690-73407219 (+) // 84.54 // q22.1"]
["11724145_a_at",81.72483,87.345955,90.70738,83.6788,89.20738,94.702995,-0.111177444,-0.015211105,0.039268017,-0.07708979,0.015211105,0.10145807,0.8321909,0.5668869,-1.0297066,-0.042233318,1.0297066,"down","SLC37A1",54020.0,"0006810 // transport // inferred from electronic annotation /// 0008643 // carbohydrate transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation","chr21:43919738-44001536 (+) // 96.15 // q22.3"]
["11738915_x_at",10.878989,11.658424,11.007749,10.713032,11.564599,10.43108,-0.008487463,0.09134078,0.008487225,-0.03066516,0.079683304,-0.06914353,0.81428593,0.5308558,1.0260886,0.0371553,1.0260886,"up","CD200R1",131450.0,"0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0050776 // regulation of immune response // traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr3:112647764-112693937 (-) // 100.0 // q13.2"]
["11750788_a_at",56.42125,56.951828,57.857117,50.41139,51.426468,52.18349,0.056322575,0.069826126,0.092577934,-0.10616636,-0.077404976,-0.056322575,0.09110642,0.001032762,1.1117817,0.15287356,1.1117817,"up","CSNK1G1",53944.0,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr15:64457935-64665968 (-) // 100.0 // q22.31"]
["11761080_at",10.139696,11.491451,11.268673,10.752226,9.808088,12.266364,-0.118462086,0.062084436,0.033841133,-0.033841133,-0.16643262,0.15623116,0.98535264,0.950782,1.0049813,0.0071686273,1.0049813,"up","SGSH",6448.0,"0006029 // proteoglycan metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation","0005764 // lysosome // inferred from electronic annotation","0003824 // catalytic activity // traceable author statement /// 0003824 // catalytic activity // inferred from electronic annotation /// 0008484 // sulfuric ester hydrolase activity // inferred from electronic annotation /// 0016250 // N-sulfoglucosamine sulfohydrolase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:78184362-78194137 (-) // 83.41 // q25.3"]
["11734519_x_at",9.44276,7.6676555,7.980142,8.441284,9.66758,7.566263,0.20227027,-0.098152876,-0.040524006,0.040524006,0.23621655,-0.11735749,0.94290835,0.82787716,-1.0223788,-0.03192983,1.0223788,"down","PAGE2",203569.0,"","","","chrX:55115440-55119269 (+) // 97.5 // p11.21"]
["11755661_a_at",9.401822,9.468945,10.368459,8.991759,10.266098,9.740283,-0.030643225,-0.020379782,0.11054611,-0.09498024,0.096232176,0.02038002,0.95727134,0.86891824,1.0087931,0.012630335,1.0087931,"up","KCNMA1",3778.0,"0001666 // response to hypoxia // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006813 // potassium ion transport // inferred from direct assay /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0006970 // response to osmotic stress // inferred from direct assay /// 0007268 // synaptic transmission // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0030007 // cellular potassium ion homeostasis // inferred from direct assay /// 0034465 // response to carbon monoxide // inferred from direct assay /// 0034465 // response to carbon monoxide // inferred from mutant phenotype /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0042391 // regulation of membrane potential // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0045794 // negative regulation of cell volume // inferred from direct assay /// 0051592 // response to calcium ion // inferred from direct assay /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0060073 // micturition // inferred from direct assay /// 0060083 // smooth muscle contraction involved in micturition // inferred from direct assay /// 0071805 // potassium ion transmembrane transport // not recorded /// 0071805 // potassium ion transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005901 // caveola // inferred from direct assay /// 0008076 // voltage-gated potassium channel complex // inferred from direct assay /// 0008076 // voltage-gated potassium channel complex // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003779 // actin binding // inferred from direct assay /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005249 // voltage-gated potassium channel activity // inferred from direct assay /// 0005249 // voltage-gated potassium channel activity // inferred from electronic annotation /// 0005267 // potassium channel activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0015269 // calcium-activated potassium channel activity // inferred from direct assay /// 0015269 // calcium-activated potassium channel activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0060072 // large conductance calcium-activated potassium channel activity // inferred from direct assay /// 0060072 // large conductance calcium-activated potassium channel activity // inferred from mutant phenotype /// 0060072 // large conductance calcium-activated potassium channel activity // inferred from electronic annotation","chr10:78637357-78943237 (-) // 98.39 // q22.3"]
["11716025_a_at",413.40826,405.06274,435.70767,426.5842,401.56464,441.85782,-0.022631645,-0.05205345,0.05316162,0.022631645,-0.06456661,0.07338333,0.91186255,0.7468061,-1.0123143,-0.01765731,1.0123143,"down","GOLGA7",51125.0,"","0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","","chr8:41348134-41368499 (+) // 96.01 // p11.21"]
["11726963_s_at",62.105385,65.02803,74.15301,62.87052,64.07677,64.542305,-0.05030489,0.016038418,0.20548153,-0.032639503,-0.0052218437,0.005221367,0.7588418,0.42990115,1.0482273,0.067951605,1.0482273,"up","SGTB",54557.0,"","","","chr5:64961756-65017940 (-) // 70.79 // q12.3"]
["11732950_a_at",68.37405,56.566204,59.319958,55.895187,57.621338,56.880722,0.25617743,-0.017331123,0.051246166,-0.034546852,0.009331703,-0.009331703,0.6415432,0.26295447,1.0778923,0.10821304,1.0778923,"up","AHI1",54806.0,"0001738 // morphogenesis of a polarized epithelium // inferred from sequence or structural similarity /// 0001947 // heart looping // inferred from sequence or structural similarity /// 0002092 // positive regulation of receptor internalization // inferred from sequence or structural similarity /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from sequence or structural similarity /// 0007417 // central nervous system development // inferred from sequence or structural similarity /// 0010842 // retina layer formation // inferred from sequence or structural similarity /// 0016192 // vesicle-mediated transport // inferred from sequence or structural similarity /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0030030 // cell projection organization // inferred from electronic annotation /// 0030862 // positive regulation of polarized epithelial cell differentiation // inferred from sequence or structural similarity /// 0030902 // hindbrain development // inferred from sequence or structural similarity /// 0033365 // protein localization to organelle // inferred from electronic annotation /// 0034613 // cellular protein localization // inferred from sequence or structural similarity /// 0035844 // cloaca development // inferred from sequence or structural similarity /// 0035845 // photoreceptor cell outer segment organization // inferred from sequence or structural similarity /// 0039008 // pronephric nephron tubule morphogenesis // inferred from sequence or structural similarity /// 0039023 // pronephric duct morphogenesis // inferred from sequence or structural similarity /// 0042384 // cilium assembly // inferred from sequence or structural similarity /// 0043066 // negative regulation of apoptotic process // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0050795 // regulation of behavior // inferred from sequence or structural similarity /// 0060271 // cilium morphogenesis // inferred from sequence or structural similarity /// 0060271 // cilium morphogenesis // inferred from electronic annotation /// 0065001 // specification of axis polarity // inferred from sequence or structural similarity /// 0070121 // Kupffer's vesicle development // inferred from sequence or structural similarity /// 0070986 // left/right axis specification // inferred from sequence or structural similarity /// 0071599 // otic vesicle development // inferred from sequence or structural similarity","0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005814 // centriole // inferred from sequence or structural similarity /// 0005814 // centriole // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from direct assay /// 0005912 // adherens junction // inferred from direct assay /// 0005912 // adherens junction // inferred from electronic annotation /// 0005929 // cilium // inferred from sequence or structural similarity /// 0005929 // cilium // inferred from electronic annotation /// 0005932 // microtubule basal body // inferred from direct assay /// 0005932 // microtubule basal body // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0031513 // nonmotile primary cilium // inferred from sequence or structural similarity /// 0031513 // nonmotile primary cilium // inferred from electronic annotation /// 0036038 // TCTN-B9D complex // inferred from sequence or structural similarity /// 0042995 // cell projection // inferred from electronic annotation /// 0072372 // primary cilium // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr6:135708922-135818903 (-) // 96.46 // q23.3"]
["11732983_a_at",80.62283,86.989075,81.79379,82.739586,77.61833,86.61259,-0.029096127,0.08054972,-0.008293152,0.008293152,-0.0838871,0.07429218,0.9359113,0.8072717,1.0103259,0.014820749,1.0103259,"up","TMEM8B",51754.0,"0007155 // cell adhesion // inferred from electronic annotation /// 0007160 // cell-matrix adhesion // inferred from mutant phenotype /// 0007346 // regulation of mitotic cell cycle // traceable author statement /// 0040008 // regulation of growth // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr9:35829221-35847231 (+) // 92.96 // p13.3"]
["11757958_s_at",449.82053,438.36984,420.69614,454.06454,426.54077,453.2896,0.018600464,-0.018600464,-0.077970505,0.03214836,-0.058065414,0.029684067,0.8196787,0.5415632,-1.0190648,-0.02724577,1.0190648,"down","POGZ",23126.0,"0007049 // cell cycle // inferred from electronic annotation /// 0007064 // mitotic sister chromatid cohesion // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation /// 0051382 // kinetochore assembly // inferred from mutant phenotype","0000790 // nuclear chromatin // inferred from direct assay /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:151375199-151375546 (-) // 98.86 // q21.3"]
["11760936_at",9.855038,8.663528,9.197762,9.711498,8.359122,9.217525,0.09803033,-0.08787656,-0.0015482903,0.07686305,-0.1394794,0.0015482903,0.93080163,0.79373,1.0162283,0.023224572,1.0162283,"up","CMTM5",116173.0,"0006935 // chemotaxis // inferred from electronic annotation","0005615 // extracellular space // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005125 // cytokine activity // inferred from electronic annotation","chr14:23846251-23848607 (+) // 96.17 // q11.2"]
["11721451_a_at",958.1521,958.80536,1013.9248,910.4721,924.37476,938.54114,0.014917374,0.015900612,0.096541405,-0.058722496,-0.036859512,-0.014917374,0.37705383,0.056647766,1.0564952,0.079286195,1.0564952,"up","ETF1",2107.0,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // inferred from electronic annotation /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006415 // translational termination // traceable author statement /// 0006415 // translational termination // inferred from electronic annotation /// 0006449 // regulation of translational termination // traceable author statement /// 0006479 // protein methylation // inferred from direct assay /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement","0003723 // RNA binding // traceable author statement /// 0003747 // translation release factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008079 // translation termination factor activity // traceable author statement /// 0016149 // translation release factor activity, codon specific // inferred from electronic annotation /// 0043022 // ribosome binding // traceable author statement","chr5:137841783-137878989 (-) // 97.35 // q31.2"]
["11753864_x_at",20.41874,20.751957,21.645197,20.088509,21.617758,20.928192,-0.029453754,-0.0061001778,0.05469942,-0.052977085,0.05286932,0.0061001778,0.9741136,0.91714185,1.0030437,0.004384392,1.0030437,"up","PAX5",5079.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0002053 // positive regulation of mesenchymal cell proliferation // inferred from electronic annotation /// 0002329 // pre-B cell differentiation // inferred from electronic annotation /// 0002639 // positive regulation of immunoglobulin production // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006959 // humoral immune response // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007275 // multicellular organismal development // traceable author statement /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0007519 // skeletal muscle tissue development // inferred from electronic annotation /// 0008045 // motor axon guidance // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0009887 // organ morphogenesis // traceable author statement /// 0021517 // ventral spinal cord development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0033152 // immunoglobulin V(D)J recombination // inferred from electronic annotation /// 0045214 // sarcomere organization // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048745 // smooth muscle tissue development // inferred from electronic annotation /// 0050679 // positive regulation of epithelial cell proliferation // inferred from electronic annotation /// 0051573 // negative regulation of histone H3-K9 methylation // inferred from electronic annotation /// 0055007 // cardiac muscle cell differentiation // inferred from electronic annotation /// 0060043 // regulation of cardiac muscle cell proliferation // inferred from electronic annotation /// 0072358 // cardiovascular system development // inferred from electronic annotation /// 2000727 // positive regulation of cardiac muscle cell differentiation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr9:37002658-37026572 (-) // 100.0 // p13.2"]
["11761545_x_at",7.566263,7.604479,7.5264106,6.797813,8.016044,6.8683248,0.003809452,0.011077642,-0.003809452,-0.15070081,0.087118864,-0.13581324,0.7484818,0.41394278,1.0498314,0.07015764,1.0498314,"up","FAM216A",29902.0,"","","","chr12:110906223-110925103 (+) // 63.1 // q24.11"]
["11716544_at",16.416039,16.613966,17.110453,16.846552,17.258,18.50404,-0.048559666,-0.031269073,0.011212349,-0.011212349,0.023599625,0.124174595,0.5839125,0.19754417,-1.0485479,-0.06839272,1.0485479,"down","TNNI1",7135.0,"0006937 // regulation of muscle contraction // inferred from electronic annotation /// 0006942 // regulation of striated muscle contraction // non-traceable author statement /// 0030049 // muscle filament sliding // traceable author statement /// 0055010 // ventricular cardiac muscle tissue morphogenesis // inferred from electronic annotation","0005829 // cytosol // traceable author statement /// 0005861 // troponin complex // non-traceable author statement /// 0005861 // troponin complex // inferred from electronic annotation","0003779 // actin binding // non-traceable author statement /// 0003779 // actin binding // inferred from electronic annotation /// 0005523 // tropomyosin binding // non-traceable author statement","chr1:201372433-201391295 (-) // 74.1 // q32.1"]
["11741617_a_at",57.223877,63.055756,53.728382,66.87405,65.81085,61.243824,-0.11897898,0.02103138,-0.20991182,0.10584974,0.08272934,-0.021031857,0.4770504,0.11093027,-1.116102,-0.15846886,1.116102,"down","GPRIN3",285513.0,"","","","chr4:90165428-90229370 (-) // 99.1 // q22.1"]
["11750263_x_at",71.12955,67.4772,63.488205,68.15154,60.714703,74.59756,0.06887627,-0.0071730614,-0.09508419,0.0071730614,-0.15952682,0.13755512,0.9858563,0.9527131,-1.0043026,-0.006194054,1.0043026,"down","ZNF786",136051.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:148766732-148787810 (-) // 80.64 // q36.1"]
["11761443_a_at",19.329613,17.017355,17.805819,20.230337,19.329613,20.087315,0.0,-0.18380594,-0.11846399,0.06570768,0.0,0.055471897,0.4073147,0.07020016,-1.1027837,-0.14114982,1.1027837,"down","KALRN",8997.0,"0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007399 // nervous system development // inferred from sequence or structural similarity /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0016192 // vesicle-mediated transport // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from sequence or structural similarity /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // inferred from sequence or structural similarity /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0005085 // guanyl-nucleotide exchange factor activity // traceable author statement /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:124355943-124393805 (+) // 99.38 // q21.2"]
["11729751_a_at",8.203406,7.5386014,7.2538347,7.0919123,8.565925,7.979575,0.08091855,-0.04100752,-0.09656048,-0.12912965,0.14330459,0.04100752,0.89883256,0.7152993,-1.0261754,-0.03727732,1.0261754,"down","LPAR1",1902.0,"0000187 // activation of MAPK activity // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007202 // activation of phospholipase C activity // traceable author statement /// 0007204 // elevation of cytosolic calcium ion concentration // traceable author statement /// 0010942 // positive regulation of cell death // inferred from electronic annotation /// 0010977 // negative regulation of neuron projection development // inferred from electronic annotation /// 0022008 // neurogenesis // inferred from electronic annotation /// 0032060 // bleb assembly // inferred from electronic annotation /// 0035025 // positive regulation of Rho protein signal transduction // inferred from electronic annotation /// 0042552 // myelination // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from expression pattern /// 0043410 // positive regulation of MAPK cascade // inferred from electronic annotation /// 0051482 // elevation of cytosolic calcium ion concentration involved in phospholipase C-activating G-protein coupled signaling pathway // inferred from electronic annotation /// 0060999 // positive regulation of dendritic spine development // inferred from electronic annotation /// 0071453 // cellular response to oxygen levels // inferred from electronic annotation /// 0071673 // positive regulation of smooth muscle cell chemotaxis // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030139 // endocytic vesicle // inferred from direct assay /// 0043197 // dendritic spine // inferred from electronic annotation /// 0043198 // dendritic shaft // inferred from electronic annotation","0001965 // G-protein alpha-subunit binding // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0030165 // PDZ domain binding // inferred from electronic annotation /// 0070915 // lysophosphatidic acid receptor activity // inferred from electronic annotation","chr9:113635541-113800441 (-) // 85.81 // q31.3"]
["11751133_a_at",208.32773,204.35645,208.45984,198.69344,206.61192,193.93098,0.019848347,-0.007918358,0.020763397,-0.048461437,0.007917881,-0.083462715,0.51579916,0.13798502,1.0368687,0.052233204,1.0368687,"up","ATP6V1B2",526.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0015991 // ATP hydrolysis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport // traceable author statement /// 0015992 // proton transport // inferred from electronic annotation /// 0033572 // transferrin transport // traceable author statement /// 0046034 // ATP metabolic process // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005902 // microvillus // inferred from electronic annotation /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016469 // proton-transporting two-sector ATPase complex // inferred from electronic annotation /// 0033178 // proton-transporting two-sector ATPase complex, catalytic domain // inferred from electronic annotation /// 0033180 // proton-transporting V-type ATPase, V1 domain // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0005524 // ATP binding // inferred from electronic annotation /// 0015078 // hydrogen ion transmembrane transporter activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016820 // hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances // inferred from electronic annotation /// 0046933 // hydrogen ion transporting ATP synthase activity, rotational mechanism // inferred from electronic annotation /// 0046961 // proton-transporting ATPase activity, rotational mechanism // inferred from electronic annotation /// 0046961 // proton-transporting ATPase activity, rotational mechanism // traceable author statement","chr8:20054905-20078289 (+) // 99.87 // p21.3"]
["11760779_a_at",14.5853815,14.989602,16.183443,16.31503,15.234583,15.0118,-0.052200317,-0.012761593,0.09779501,0.109478,0.010626316,-0.0106265545,0.884803,0.68324333,-1.0178664,-0.025548175,1.0178664,"down","MMP19",4327.0,"0001525 // angiogenesis // inferred from electronic annotation /// 0001541 // ovarian follicle development // inferred from electronic annotation /// 0001542 // ovulation from ovarian follicle // inferred from electronic annotation /// 0001554 // luteolysis // inferred from electronic annotation /// 0006508 // proteolysis // non-traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009725 // response to hormone stimulus // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030574 // collagen catabolic process // inferred from electronic annotation /// 0051591 // response to cAMP // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // non-traceable author statement /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from electronic annotation","0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:56231912-56236724 (-) // 99.91 // q13.2"]
["11719155_a_at",136.21608,142.18404,122.32832,152.08177,140.33795,159.86911,-0.052435398,0.009427071,-0.20757341,0.10651493,-0.009427071,0.1785593,0.47025532,0.10694155,-1.129285,-0.1754096,1.129285,"down","DRAM1",55332.0,"0006914 // autophagy // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation","0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr12:102271104-102317401 (+) // 85.76 // q23.2"]
["11759350_at",8.785807,7.566262,9.544402,8.065038,8.604127,7.8923707,0.07681942,-0.13877463,0.19629955,-0.046673775,0.046673775,-0.07789636,0.8172942,0.537174,1.0502603,0.07074694,1.0502603,"up","METTL20",254013.0,"0006479 // protein methylation // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0008168 // methyltransferase activity // inferred from electronic annotation /// 0008276 // protein methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr12:31812608-31826879 (+) // 51.89 // p11.21"]
["11739217_a_at",112.24715,104.70735,108.32046,129.34927,120.727844,138.0915,-0.05253935,-0.1528554,-0.10391283,0.15205383,0.052539825,0.24640656,0.23672597,0.01584463,-1.1920427,-0.2534359,1.1920427,"down","RSAD2",91543.0,"0001503 // ossification // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009615 // response to virus // inferred from direct assay /// 0009615 // response to virus // inferred from electronic annotation /// 0030278 // regulation of ossification // inferred from electronic annotation /// 0034157 // positive regulation of toll-like receptor 7 signaling pathway // inferred from sequence or structural similarity /// 0034165 // positive regulation of toll-like receptor 9 signaling pathway // inferred from sequence or structural similarity /// 0035710 // CD4-positive, alpha-beta T cell activation // inferred from sequence or structural similarity /// 0043367 // CD4-positive, alpha-beta T cell differentiation // inferred from sequence or structural similarity /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045071 // negative regulation of viral genome replication // inferred from direct assay /// 0050709 // negative regulation of protein secretion // inferred from direct assay /// 0051607 // defense response to virus // inferred from direct assay /// 0051607 // defense response to virus // inferred from electronic annotation /// 2000553 // positive regulation of T-helper 2 cell cytokine production // inferred from sequence or structural similarity","0005739 // mitochondrion // inferred from direct assay /// 0005741 // mitochondrial outer membrane // inferred from direct assay /// 0005743 // mitochondrial inner membrane // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005811 // lipid particle // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0043621 // protein self-association // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation /// 0051539 // 4 iron, 4 sulfur cluster binding // inferred from direct assay","chr2:7017774-7038937 (+) // 87.81 // p25.2"]
["11718370_a_at",172.88113,159.08078,180.48024,182.93729,198.65102,187.95631,-0.071815014,-0.1918354,-0.009753704,0.009753704,0.12864113,0.0488019,0.41475865,0.074066296,-1.1122905,-0.15353362,1.1122905,"down","NRBF2",29982.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0010467 // gene expression // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation","chr10:64893006-64914786 (+) // 96.84 // q21.3"]
["11749759_a_at",8.087573,8.616855,10.268456,8.871961,10.256816,8.871609,-0.1335175,-0.042062998,0.2109232,2.8848648E-5,0.20928669,-2.861023E-5,0.87713534,0.66542953,-1.0410082,-0.05798148,1.0410082,"down","SCN3A",6328.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // non-traceable author statement /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0035725 // sodium ion transmembrane transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0001518 // voltage-gated sodium channel complex // non-traceable author statement /// 0001518 // voltage-gated sodium channel complex // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005248 // voltage-gated sodium channel activity // non-traceable author statement /// 0005248 // voltage-gated sodium channel activity // inferred from electronic annotation /// 0005272 // sodium channel activity // inferred from electronic annotation","chr2:165946480-165950338 (-) // 94.65 // q24.3"]
["11722249_s_at",22.528786,25.60281,23.614666,23.977646,22.953993,25.023542,-0.07891703,0.105615616,-0.011003494,0.011003494,-0.051941395,0.07259941,0.98170614,0.9384666,-1.0036958,-0.005322149,1.0036958,"down","C10orf11",83938.0,"","","","chr10:77542518-78317130 (+) // 96.03 // q22.2"]
["11733758_a_at",69.43916,65.77867,71.02527,73.59847,69.54068,69.874016,-0.005557537,-0.08368683,0.0270257,0.078368664,-0.00344944,0.0034489632,0.6913635,0.32719922,-1.0330157,-0.04686222,1.0330157,"down","ZNF446",55663.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016032 // viral reproduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:58987751-58992593 (+) // 98.19 // q13.43"]
["11721725_at",97.04068,97.04068,94.06806,98.63046,95.90976,97.214516,0.0,0.0,-0.04488516,0.023443222,-0.01691246,0.0025815964,0.7371634,0.396295,-1.0125542,-0.01799909,1.0125542,"down","PSKH1",5681.0,"0006468 // protein phosphorylation // non-traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // non-traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // non-traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr16:67927164-67963581 (+) // 96.04 // q22.1"]
["11739969_a_at",199.31927,185.78593,213.71902,190.4364,183.49489,188.02373,0.07496977,-0.026470184,0.17560387,0.009197712,-0.044371605,-0.009197235,0.59979516,0.21264413,1.0639951,0.08949154,1.0639951,"up","MIER1",57708.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007165 // signal transduction // inferred from mutant phenotype /// 0031937 // positive regulation of chromatin silencing // inferred from direct assay /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0017053 // transcriptional repressor complex // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction","chr1:67395925-67454302 (+) // 97.07 // p31.3"]
["11764016_a_at",94.10858,96.71331,94.058395,94.90234,94.91768,92.36134,-0.006058693,0.033329487,-0.006828308,0.006058693,0.0062918663,-0.033095837,0.7993054,0.5021029,1.0095618,0.013729194,1.0095618,"up","TRAPPC2L",51693.0,"0006810 // transport // inferred from electronic annotation /// 0006888 // ER to Golgi vesicle-mediated transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","","chr16:88928480-88929086 (+) // 52.33 // q24.3"]
["11729417_at",7.9882913,7.807335,7.6304765,7.941592,7.454632,7.807335,0.033056974,0.0,-0.033056974,0.024598122,-0.06669307,0.0,0.88908625,0.69502574,1.0097735,0.014031711,1.0097735,"up","KRT24",192666.0,"","0005737 // cytoplasm // inferred from direct assay /// 0005882 // intermediate filament // inferred from electronic annotation /// 0045111 // intermediate filament cytoskeleton // inferred from direct assay","0005198 // structural molecule activity // inferred from electronic annotation","chr17:38854244-38860004 (-) // 99.05 // q21.2"]
["11744054_a_at",577.55396,587.70795,597.54095,683.08813,671.8651,704.50836,-0.13364887,-0.10850525,-0.08456707,0.1084671,0.08456707,0.15301228,0.08459432,7.978231E-4,-1.1681746,-0.22425595,1.1681746,"down","ZNFX1",57169.0,"","","0046872 // metal ion binding // inferred from electronic annotation","chr20:47862433-47894963 (-) // 94.87 // q13.13"]
["11761367_x_at",22.824732,21.369616,22.60063,25.477657,26.939957,24.172846,-0.04139471,-0.1364317,-0.05562973,0.11723995,0.19775486,0.04139471,0.2655409,0.021917406,-1.1460065,-0.19661517,1.1460065,"down","PKD2L2",27039.0,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation","chr5:137225154-137278432 (+) // 87.6 // q31.2"]
["11735553_a_at",55.713734,63.92047,63.766052,51.54148,51.07989,51.017227,0.056149006,0.25439405,0.25090504,-0.056149483,-0.06912804,-0.07089901,0.24960664,0.018373717,1.191304,0.25254157,1.191304,"up","C16orf93",90835.0,"","","","chr16:30768752-30773542 (-) // 98.81 // p11.2"]
["11724660_a_at",17.992977,16.447342,19.538368,20.082613,16.417156,17.992977,0.0,-0.12957954,0.11887598,0.15851307,-0.1322298,0.0,0.97390056,0.9165377,-1.0085824,-0.012328888,1.0085824,"down","PAX8",7849.0,"0001655 // urogenital system development // inferred from sequence or structural similarity /// 0001655 // urogenital system development // inferred from electronic annotation /// 0001656 // metanephros development // inferred from electronic annotation /// 0001658 // branching involved in ureteric bud morphogenesis // inferred from expression pattern /// 0001822 // kidney development // inferred from expression pattern /// 0001823 // mesonephros development // inferred from sequence or structural similarity /// 0001823 // mesonephros development // inferred from electronic annotation /// 0003337 // mesenchymal to epithelial transition involved in metanephros morphogenesis // inferred from expression pattern /// 0006351 // transcription, DNA-dependent // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007417 // central nervous system development // inferred from expression pattern /// 0007417 // central nervous system development // inferred from electronic annotation /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030878 // thyroid gland development // inferred from expression pattern /// 0030878 // thyroid gland development // inferred from mutant phenotype /// 0030878 // thyroid gland development // inferred from electronic annotation /// 0039003 // pronephric field specification // inferred from sequence or structural similarity /// 0039003 // pronephric field specification // inferred from electronic annotation /// 0042472 // inner ear morphogenesis // inferred from sequence or structural similarity /// 0042472 // inner ear morphogenesis // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from sequence or structural similarity /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048793 // pronephros development // inferred from sequence or structural similarity /// 0048793 // pronephros development // inferred from electronic annotation /// 0071371 // cellular response to gonadotropin stimulus // inferred from direct assay /// 0071599 // otic vesicle development // inferred from expression pattern /// 0072050 // S-shaped body morphogenesis // inferred from electronic annotation /// 0072073 // kidney epithelium development // inferred from electronic annotation /// 0072108 // positive regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis // inferred from sequence or structural similarity /// 0072108 // positive regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis // inferred from electronic annotation /// 0072164 // mesonephric tubule development // inferred from electronic annotation /// 0072205 // metanephric collecting duct development // inferred from electronic annotation /// 0072207 // metanephric epithelium development // inferred from expression pattern /// 0072221 // metanephric distal convoluted tubule development // inferred from sequence or structural similarity /// 0072221 // metanephric distal convoluted tubule development // inferred from electronic annotation /// 0072278 // metanephric comma-shaped body morphogenesis // inferred from expression pattern /// 0072284 // metanephric S-shaped body morphogenesis // inferred from expression pattern /// 0072289 // metanephric nephron tubule formation // inferred from sequence or structural similarity /// 0072289 // metanephric nephron tubule formation // inferred from electronic annotation /// 0072305 // negative regulation of mesenchymal stem cell apoptotic process involved in metanephric nephron morphogenesis // inferred from sequence or structural similarity /// 0072305 // negative regulation of mesenchymal stem cell apoptotic process involved in metanephric nephron morphogenesis // inferred from electronic annotation /// 0072307 // regulation of metanephric nephron tubule epithelial cell differentiation // inferred from sequence or structural similarity /// 0072307 // regulation of metanephric nephron tubule epithelial cell differentiation // inferred from electronic annotation /// 0090190 // positive regulation of branching involved in ureteric bud morphogenesis // inferred from sequence or structural similarity /// 0090190 // positive regulation of branching involved in ureteric bud morphogenesis // inferred from electronic annotation /// 1900212 // negative regulation of mesenchymal cell apoptotic process involved in metanephros development // inferred from sequence or structural similarity /// 1900215 // negative regulation of apoptotic process involved in metanephric collecting duct development // inferred from sequence or structural similarity /// 1900218 // negative regulation of apoptotic process involved in metanephric nephron tubule development // inferred from sequence or structural similarity /// 2000594 // positive regulation of metanephric DCT cell differentiation // inferred from sequence or structural similarity /// 2000594 // positive regulation of metanephric DCT cell differentiation // inferred from electronic annotation /// 2000611 // positive regulation of thyroid hormone generation // inferred from mutant phenotype /// 2000611 // positive regulation of thyroid hormone generation // inferred from electronic annotation /// 2000612 // regulation of thyroid-stimulating hormone secretion // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from sequence or structural similarity /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay","0000979 // RNA polymerase II core promoter sequence-specific DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from mutant phenotype /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0004996 // thyroid-stimulating hormone receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from electronic annotation","chr2:113972093-114036527 (-) // 91.34 // q13"]
["11753748_x_at",54.977352,51.155464,47.680073,49.26175,43.533215,48.743378,0.16600037,0.062051296,-0.039450645,0.007630825,-0.17072058,-0.007630825,0.6055837,0.21933702,1.0865645,0.11977387,1.0865645,"up","MED16",10025.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // non-traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // inferred from direct assay /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0030518 // intracellular steroid hormone receptor signaling pathway // inferred from direct assay /// 0030521 // androgen receptor signaling pathway // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0016592 // mediator complex // inferred from direct assay /// 0016592 // mediator complex // inferred from electronic annotation","0003712 // transcription cofactor activity // inferred from direct assay /// 0003713 // transcription coactivator activity // traceable author statement /// 0004872 // receptor activity // inferred from direct assay /// 0030375 // thyroid hormone receptor coactivator activity // inferred from direct assay /// 0042809 // vitamin D receptor binding // non-traceable author statement /// 0046966 // thyroid hormone receptor binding // inferred from direct assay","chr19:867971-891148 (-) // 100.0 // p13.3"]
["11732847_at",20.067406,21.209702,20.2748,23.076717,20.412666,18.515491,-0.019721985,0.06014824,-0.0048885345,0.18186188,0.0048885345,-0.13584328,0.9876409,0.9596333,-1.0035574,-0.005123199,1.0035574,"down","CABP7",164633.0,"","0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0032588 // trans-Golgi network membrane // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr22:30116343-30127826 (+) // 84.66 // q12.2"]
["11716236_s_at",1483.7343,1496.0253,1420.3743,1419.5474,1421.7327,1449.0568,0.04785061,0.059752464,-0.01511097,-0.015951157,-0.0137319565,0.0137319565,0.60938543,0.22342281,1.0253723,0.03614778,1.0253723,"up","RAE1",8480.0,"0005975 // carbohydrate metabolic process // traceable author statement /// 0006406 // mRNA export from nucleus // traceable author statement /// 0008645 // hexose transport // traceable author statement /// 0010827 // regulation of glucose transport // traceable author statement /// 0015758 // glucose transport // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0071407 // cellular response to organic cyclic compound // inferred from electronic annotation","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // traceable author statement /// 0005640 // nuclear outer membrane // traceable author statement /// 0005643 // nuclear pore // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005856 // cytoskeleton // traceable author statement","0003723 // RNA binding // traceable author statement /// 0008017 // microtubule binding // inferred from sequence or structural similarity","chr20:55926585-55953796 (+) // 95.85 // q13.31"]
["11731368_at",17.423988,18.254,17.686995,19.305038,17.142757,21.576235,-0.044375896,0.022761822,-0.022761822,0.10352659,-0.06785154,0.2639923,0.67532414,0.3061669,-1.0827357,-0.11468106,1.0827357,"down","ZNF442",79973.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:12460183-12476475 (-) // 77.08 // p13.2"]
["11722373_a_at",130.11723,124.531815,147.8144,126.78254,131.49205,128.18349,0.0108008385,-0.05249691,0.19477558,-0.02665472,0.02596426,-0.0108008385,0.802662,0.50920314,1.0387561,0.054856993,1.0387561,"up","GGA2",23062.0,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // non-traceable author statement /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation","0005622 // intracellular // non-traceable author statement /// 0005622 // intracellular // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from direct assay /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030131 // clathrin adaptor complex // inferred from electronic annotation /// 0030136 // clathrin-coated vesicle // inferred from direct assay /// 0044431 // Golgi apparatus part // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0030306 // ADP-ribosylation factor binding // inferred from direct assay","chr16:23474936-23521835 (-) // 83.87 // p12.2"]
["11755648_a_at",307.65103,309.6716,301.7034,284.23737,273.6832,284.43134,0.0706892,0.08013344,0.04252529,-0.043509483,-0.098098755,-0.04252529,0.14622554,0.00429544,1.0911331,0.12582712,1.0911331,"up","MICAL2",9645.0,"0008152 // metabolic process // inferred from electronic annotation /// 0030042 // actin filament depolymerization // inferred from sequence or structural similarity /// 0055114 // oxidation-reduction process // inferred from sequence or structural similarity /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation","0003779 // actin binding // inferred from sequence or structural similarity /// 0003779 // actin binding // inferred from electronic annotation /// 0004497 // monooxygenase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016709 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation /// 0071949 // FAD binding // inferred from sequence or structural similarity","chr11:12274078-12285334 (+) // 59.68 // p15.3"]
["11746423_a_at",288.88046,284.62186,307.5203,295.00696,297.52115,305.54062,-0.036397934,-0.057824135,0.053811073,-0.0061216354,0.0061216354,0.044493675,0.79369175,0.49186814,-1.0198108,-0.028301515,1.0198108,"down","RNFT1",51136.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:58030263-58042122 (-) // 96.41 // q23.1"]
["11762184_at",19.808947,20.877014,22.254992,22.057491,20.782309,18.580278,-0.07248354,0.003279686,0.09549332,0.08263302,-0.003279686,-0.16486359,0.88795346,0.6914628,1.0261678,0.03726659,1.0261678,"up","SLC25A42",284439.0,"0006810 // transport // inferred from electronic annotation /// 0015866 // ADP transport // inferred from direct assay /// 0015867 // ATP transport // inferred from direct assay /// 0035349 // coenzyme A transmembrane transport // inferred from direct assay /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0080121 // AMP transport // inferred from direct assay","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005347 // ATP transmembrane transporter activity // inferred from direct assay /// 0015217 // ADP transmembrane transporter activity // inferred from direct assay /// 0015228 // coenzyme A transmembrane transporter activity // inferred from direct assay /// 0043262 // adenosine-diphosphatase activity // inferred from direct assay /// 0080122 // AMP transmembrane transporter activity // inferred from direct assay","chr19:19206751-19217743 (+) // 76.22 // p13.11"]
["11744248_a_at",12.6496935,12.623716,11.756577,13.349418,12.629476,10.997873,0.002636671,-3.2901764E-4,-0.10299802,0.0803113,3.2901764E-4,-0.19924116,0.9851717,0.95034236,1.0041468,0.005970218,1.0041468,"up","LRRC4C",57689.0,"0050770 // regulation of axonogenesis // inferred from direct assay","0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr11:40135752-40315691 (-) // 94.38 // p12"]
["11721718_a_at",101.50984,98.69285,100.4284,96.22983,99.57091,102.24586,0.021637917,-0.01896429,0.0061855316,-0.055425644,-0.0061855316,0.032060623,0.8793384,0.67067164,1.008914,0.012803195,1.008914,"up","ATRX",546.0,"0006281 // DNA repair // inferred from electronic annotation /// 0006281 // DNA repair // traceable author statement /// 0006306 // DNA methylation // traceable author statement /// 0006310 // DNA recombination // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation /// 0032508 // DNA duplex unwinding // traceable author statement","0000228 // nuclear chromosome // inferred from electronic annotation /// 0000792 // heterochromatin // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005720 // nuclear heterochromatin // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003678 // DNA helicase activity // traceable author statement /// 0003682 // chromatin binding // inferred from electronic annotation /// 0004386 // helicase activity // traceable author statement /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070087 // chromo shadow domain binding // inferred from physical interaction","chrX:76760357-77041755 (-) // 97.35 // q21.1"]
["11758201_s_at",387.72562,391.93317,375.61282,365.07974,379.08102,384.37546,0.022524834,0.038096428,-0.023264885,-0.06429958,-0.010004997,0.010004997,0.67476004,0.30521962,1.0237656,0.033885386,1.0237656,"up","IMPAD1",54928.0,"0001501 // skeletal system development // inferred from electronic annotation /// 0001958 // endochondral ossification // inferred from electronic annotation /// 0002063 // chondrocyte development // inferred from electronic annotation /// 0006021 // inositol biosynthetic process // inferred from electronic annotation /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0030204 // chondroitin sulfate metabolic process // inferred from electronic annotation /// 0042733 // embryonic digit morphogenesis // inferred from electronic annotation /// 0046854 // phosphatidylinositol phosphorylation // inferred from electronic annotation","0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008254 // 3'-nucleotidase activity // inferred from electronic annotation /// 0008441 // 3'(2'),5'-bisphosphate nucleotidase activity // inferred from electronic annotation /// 0008934 // inositol monophosphate 1-phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0052832 // inositol monophosphate 3-phosphatase activity // inferred from electronic annotation /// 0052833 // inositol monophosphate 4-phosphatase activity // inferred from electronic annotation /// 0052834 // inositol monophosphate phosphatase activity // inferred from electronic annotation","chr8:57870489-57871203 (-) // 70.28 // q12.1"]
["11763943_at",15.008756,13.976393,15.008756,14.108511,12.676001,13.719308,0.09602523,-0.0067868233,0.09602523,0.0067870617,-0.14767933,-0.033571243,0.46827853,0.105667226,1.0866663,0.11990903,1.0866663,"up","MT1DP",326343.0,"","","0046872 // metal ion binding // inferred from electronic annotation","chr16:56677597-56679161 (+) // 89.9 // q12.2"]
["11717792_a_at",35.030285,33.606586,34.775524,37.425117,35.595596,31.407667,0.005265236,-0.054593563,-0.005265236,0.100669384,0.02836132,-0.15222073,0.96681243,0.8989917,-1.0072821,-0.010467836,1.0072821,"down","FAM219A",203259.0,"","","","chr9:34398026-34458568 (-) // 87.17 // p13.3"]
["11761565_x_at",122.87358,118.60303,118.493004,108.55991,124.20732,115.21712,0.051703453,6.699562E-4,-6.6947937E-4,-0.12697935,0.067279816,-0.041115284,0.7619903,0.43592954,1.0358676,0.050839577,1.0358676,"up","CEP70",80321.0,"0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr3:138251355-138313382 (-) // 82.69 // q22.3"]
["11763255_x_at",18.954014,20.817005,19.765938,20.69224,21.505707,22.599957,-0.1309228,0.004336357,-0.070409775,-0.004336357,0.051293373,0.12289381,0.4344304,0.08514983,-1.0884554,-0.12228234,1.0884554,"down","IGLJ3",28831.0,"","","","chr22:23063353-23264812 (+) // 84.66 // q11.22"]
["11727076_x_at",8.316224,7.6590376,8.890055,9.347815,9.224205,8.676383,-0.07871437,-0.19747996,0.017549276,0.08998585,0.07078171,-0.017549276,0.504336,0.13003792,-1.0972973,-0.13395447,1.0972973,"down","PLAC4",191585.0,"","0019028 // viral capsid // inferred from electronic annotation","0005198 // structural molecule activity // inferred from electronic annotation","chr21:42547158-42551989 (-) // 27.4 // q22.2"]
["11758873_a_at",114.493004,123.41671,117.10619,117.87695,122.52765,110.35432,-0.037290096,0.07098818,-0.004732132,0.004732132,0.060557842,-0.09040642,0.9161767,0.7574374,1.0125741,0.018027455,1.0125741,"up","HPSE",10855.0,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006029 // proteoglycan metabolic process // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007160 // cell-matrix adhesion // inferred from direct assay /// 0010575 // positive regulation vascular endothelial growth factor production // inferred from direct assay /// 0030194 // positive regulation of blood coagulation // inferred from direct assay /// 0030200 // heparan sulfate proteoglycan catabolic process // inferred from direct assay /// 0033690 // positive regulation of osteoblast proliferation // inferred from direct assay /// 0033690 // positive regulation of osteoblast proliferation // inferred from electronic annotation /// 0042060 // wound healing // inferred from electronic annotation /// 0051797 // regulation of hair follicle development // inferred from direct assay /// 0051798 // positive regulation of hair follicle development // inferred from electronic annotation /// 0051897 // positive regulation of protein kinase B signaling cascade // inferred from direct assay /// 0051897 // positive regulation of protein kinase B signaling cascade // inferred from electronic annotation /// 0060055 // angiogenesis involved in wound healing // inferred from electronic annotation /// 0061042 // vascular wound healing // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005764 // lysosome // inferred from direct assay /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0045121 // membrane raft // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004566 // beta-glucuronidase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity, acting on glycosyl bonds // inferred from electronic annotation /// 0030305 // heparanase activity // inferred from direct assay /// 0043169 // cation binding // inferred from electronic annotation /// 0045545 // syndecan binding // inferred from direct assay /// 0046983 // protein dimerization activity // inferred from direct assay","chr4:84213613-84256306 (-) // 72.12 // q21.23"]
["11731483_a_at",9.457116,10.7133665,10.2749815,11.353093,11.019068,11.9042225,-0.20023489,-0.020295143,-0.08057141,0.06337857,0.020295143,0.13176632,0.36016524,0.05006659,-1.1267602,-0.17218056,1.1267602,"down","CNRIP1",25927.0,"","","","chr2:68520148-68547193 (-) // 97.66 // p14"]
["11722822_a_at",11.915257,12.282964,14.510713,13.547998,13.331928,12.335925,-0.10606551,-0.062216997,0.17824268,0.07920408,0.05600977,-0.05600977,0.9422414,0.8249095,-1.0161273,-0.02308122,1.0161273,"down","SKP1",6500.0,"0000080 // G1 phase of mitotic cell cycle // traceable author statement /// 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000084 // S phase of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0007219 // Notch signaling pathway // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016567 // protein ubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0031146 // SCF-dependent proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0031146 // SCF-dependent proteasomal ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0035518 // histone H2A monoubiquitination // inferred from direct assay /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement","0005654 // nucleoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0019005 // SCF ubiquitin ligase complex // inferred from direct assay /// 0019005 // SCF ubiquitin ligase complex // inferred from electronic annotation /// 0031519 // PcG protein complex // inferred from direct assay","0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction","chr5:133492081-133512724 (-) // 98.94 // q31.1"]
["11747218_a_at",14.073739,10.604924,13.192722,15.157146,15.157146,14.983924,-0.045204878,-0.4534762,-0.13846803,0.061788082,0.061788082,0.045205116,0.45043054,0.09551188,-1.2046746,-0.2686435,1.2046746,"down","LOC442028",442028.0,"","","","chr2:95533230-95601120 (-) // 91.97 // q11.1"]
["11762671_at",6.9784565,6.9912853,7.4814773,7.871738,7.5807137,7.8923736,-0.1099205,-0.10727072,-0.00950551,0.06385374,0.009505272,0.06763077,0.30685055,0.032123175,-1.0886666,-0.12256215,1.0886666,"down","C2",717.0,"0006508 // proteolysis // inferred from electronic annotation /// 0006956 // complement activation // traceable author statement /// 0006956 // complement activation // inferred from electronic annotation /// 0006958 // complement activation, classical pathway // inferred from electronic annotation /// 0006958 // complement activation, classical pathway // traceable author statement /// 0030449 // regulation of complement activation // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement","0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr6:31895479-31902785 (+) // 65.35 // p21.33"]
["11741085_a_at",1070.3215,1035.7509,1074.3748,1059.5411,1051.0321,1044.1473,0.020421028,-0.026946068,0.025874138,0.0058164597,-0.0058164597,-0.01529789,0.8255668,0.55285907,1.0080373,0.011549064,1.0080373,"up","APLP2",334.0,"0001967 // suckling behavior // inferred from electronic annotation /// 0006878 // cellular copper ion homeostasis // inferred from electronic annotation /// 0007176 // regulation of epidermal growth factor-activated receptor activity // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // non-traceable author statement /// 0007617 // mating behavior // inferred from electronic annotation /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation /// 0030901 // midbrain development // inferred from electronic annotation /// 0050885 // neuromuscular process controlling balance // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008201 // heparin binding // inferred from electronic annotation /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0046914 // transition metal ion binding // inferred from electronic annotation","chr11:129939715-130014705 (+) // 96.28 // q24.3"]
["11753363_x_at",18.324041,15.972464,17.625021,18.833529,16.681883,17.352116,0.06736946,-0.13078141,0.011256695,0.106935024,-0.06808615,-0.011256695,0.91394573,0.75138015,-1.0185964,-0.02658254,1.0185964,"down","ZSCAN2",54993.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0016032 // viral reproduction // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr15:85147131-85166867 (+) // 87.88 // q25.2"]
["11754717_a_at",249.37408,267.36713,278.05978,259.64423,258.54434,272.04074,-0.07936764,0.02114296,0.07771587,-0.02114296,-0.027267456,0.04614353,0.96571743,0.8950213,1.0050398,0.00725265,1.0050398,"up","TPP2",7174.0,"0000209 // protein polyubiquitination // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0006508 // proteolysis // not recorded /// 0006508 // proteolysis // inferred from electronic annotation /// 0006508 // proteolysis // traceable author statement","0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0004175 // endopeptidase activity // traceable author statement /// 0004177 // aminopeptidase activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // not recorded /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0008240 // tripeptidyl-peptidase activity // inferred from electronic annotation /// 0008240 // tripeptidyl-peptidase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042277 // peptide binding // inferred from electronic annotation","chr13:103309296-103330809 (+) // 65.15 // q33.1"]
["11744028_a_at",350.1511,355.67972,339.43622,361.03827,366.85855,353.93613,-0.01905632,0.0035448074,-0.06389332,0.025117874,0.048190117,-0.0035448074,0.48562762,0.1158054,-1.0350659,-0.04972261,1.0350659,"down","SLC35A1",10559.0,"0005975 // carbohydrate metabolic process // traceable author statement /// 0006464 // cellular protein modification process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0008643 // carbohydrate transport // inferred from electronic annotation /// 0015780 // nucleotide-sugar transport // inferred from electronic annotation /// 0015782 // CMP-N-acetylneuraminate transport // traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0000139 // Golgi membrane // inferred from electronic annotation /// 0000139 // Golgi membrane // traceable author statement /// 0005794 // Golgi apparatus // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005338 // nucleotide-sugar transmembrane transporter activity // inferred from electronic annotation /// 0005351 // sugar:hydrogen symporter activity // inferred from electronic annotation /// 0005456 // CMP-N-acetylneuraminate transmembrane transporter activity // traceable author statement","chr6:88182636-88222057 (+) // 98.35 // q15"]
["11729834_at",49.288574,60.51974,62.85492,64.422844,63.22312,58.666904,-0.3234625,-0.027309895,0.027309895,0.062856674,0.035736084,-0.072169304,0.72225034,0.37346366,-1.0841984,-0.11662872,1.0841984,"down","EIF5A2",56648.0,"0006412 // translation // inferred from electronic annotation /// 0006414 // translational elongation // inferred from electronic annotation /// 0006452 // translational frameshifting // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0007283 // spermatogenesis // non-traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from genetic interaction /// 0008612 // peptidyl-lysine modification to hypusine // traceable author statement /// 0008612 // peptidyl-lysine modification to hypusine // inferred from electronic annotation /// 0010509 // polyamine homeostasis // non-traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045901 // positive regulation of translational elongation // inferred from electronic annotation /// 0045905 // positive regulation of translational termination // inferred from electronic annotation /// 0051028 // mRNA transport // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005643 // nuclear pore // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0003746 // translation elongation factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0043022 // ribosome binding // inferred from electronic annotation","chr3:170606203-170626477 (-) // 84.51 // q26.2"]
["11724315_a_at",21.63703,21.746464,23.701641,22.584387,20.883984,20.952154,-0.0036392212,0.0036392212,0.12784529,0.058184147,-0.05474472,-0.050043106,0.7142709,0.36078498,1.0411296,0.05814965,1.0411296,"up","LUZP1",7798.0,"","0005634 // nucleus // inferred from electronic annotation","","chr1:23410028-23495351 (-) // 91.43 // p36.12"]
["11761382_x_at",8.925292,9.306058,10.81098,9.58214,9.397282,9.202643,-0.06730747,-0.0070364475,0.2092185,0.03514123,0.007036686,-0.02315855,0.8817845,0.6753417,1.0271298,0.038618464,1.0271298,"up","SORBS2",8470.0,"","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement /// 0030018 // Z disc // non-traceable author statement /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005200 // structural constituent of cytoskeleton // traceable author statement /// 0008093 // cytoskeletal adaptor activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008307 // structural constituent of muscle // traceable author statement","chr4:186547819-186877488 (-) // 99.81 // q35.1"]
["11739567_s_at",223.16068,231.92252,212.46951,190.09875,181.87405,192.87402,0.14062595,0.19618559,0.06979847,-0.090708256,-0.15451765,-0.06979847,0.16290171,0.0057054353,1.1814387,0.24054475,1.1814387,"up","FKBP5",2289.0,"0000413 // protein peptidyl-prolyl isomerization // not recorded /// 0000413 // protein peptidyl-prolyl isomerization // inferred from electronic annotation /// 0006457 // protein folding // inferred from electronic annotation /// 0006457 // protein folding // traceable author statement /// 0018208 // peptidyl-proline modification // not recorded","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // not recorded","0003755 // peptidyl-prolyl cis-trans isomerase activity // not recorded /// 0003755 // peptidyl-prolyl cis-trans isomerase activity // inferred from electronic annotation /// 0005528 // FK506 binding // not recorded /// 0005528 // FK506 binding // traceable author statement /// 0016853 // isomerase activity // inferred from electronic annotation /// 0031072 // heat shock protein binding // inferred from physical interaction","chr6:35541432-35610623 (-) // 87.87 // p21.31"]
["11719928_a_at",191.31995,198.95465,205.43858,199.39018,189.64697,197.83192,-0.05237007,0.004082203,0.050349712,0.0072369576,-0.065041065,-0.004082203,0.8466193,0.59757835,1.0148848,0.021316018,1.0148848,"up","KDM5B",10765.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0034720 // histone H3-K4 demethylation // inferred from direct assay /// 0034720 // histone H3-K4 demethylation // inferred from electronic annotation /// 0034721 // histone H3-K4 demethylation, trimethyl-H3-K4-specific // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003714 // transcription corepressor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016702 // oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen // inferred from electronic annotation /// 0016706 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors // inferred from electronic annotation /// 0032453 // histone demethylase activity (H3-K4 specific) // inferred from electronic annotation /// 0034647 // histone demethylase activity (H3-trimethyl-K4 specific) // inferred from direct assay /// 0034648 // histone demethylase activity (H3-dimethyl-K4 specific) // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:202696344-202778598 (-) // 90.96 // q32.1"]
["11747044_s_at",299.37402,291.7076,302.462,281.15268,288.72983,310.61304,0.018712997,-0.018712997,0.033517838,-0.07188225,-0.03351593,0.07188225,0.8703471,0.6504984,1.0156087,0.022344613,1.0156087,"up","LOC653375 /// WBSCR16","653375 /// 81554","","0005739 // mitochondrion // inferred from electronic annotation","","chr7:74765844-74790085 (+) // 97.03 // q11.23 /// chr7:74456328-74480572 (-) // 97.31 // q11.23"]
["11760079_at",8.247957,8.57342,8.267504,8.55315,8.267504,8.607479,-0.027916908,0.027916908,-0.024502039,0.024502039,-0.024502039,0.033637047,0.79286855,0.49023783,-1.0135236,-0.019379651,1.0135236,"down","ABCA1",19.0,"0002790 // peptide secretion // inferred from electronic annotation /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006497 // protein lipidation // inferred from electronic annotation /// 0006629 // lipid metabolic process // traceable author statement /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006820 // anion transport // inferred from sequence or structural similarity /// 0006820 // anion transport // inferred from electronic annotation /// 0006911 // phagocytosis, engulfment // inferred from electronic annotation /// 0007040 // lysosome organization // inferred from direct assay /// 0007186 // G-protein coupled receptor signaling pathway // inferred from mutant phenotype /// 0008202 // steroid metabolic process // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // inferred from direct assay /// 0008203 // cholesterol metabolic process // inferred from electronic annotation /// 0010745 // negative regulation of macrophage derived foam cell differentiation // traceable author statement /// 0010875 // positive regulation of cholesterol efflux // inferred from electronic annotation /// 0010887 // negative regulation of cholesterol storage // traceable author statement /// 0016197 // endosomal transport // inferred from direct assay /// 0030819 // positive regulation of cAMP biosynthetic process // inferred from mutant phenotype /// 0032367 // intracellular cholesterol transport // inferred from mutant phenotype /// 0032488 // Cdc42 protein signal transduction // inferred from mutant phenotype /// 0033344 // cholesterol efflux // inferred from direct assay /// 0033344 // cholesterol efflux // inferred from mutant phenotype /// 0033344 // cholesterol efflux // inferred from electronic annotation /// 0033700 // phospholipid efflux // inferred from direct assay /// 0033700 // phospholipid efflux // inferred from mutant phenotype /// 0033700 // phospholipid efflux // inferred from electronic annotation /// 0034380 // high-density lipoprotein particle assembly // inferred from mutant phenotype /// 0034616 // response to laminar fluid shear stress // inferred from expression pattern /// 0038027 // apolipoprotein A-I-mediated signaling pathway // inferred from direct assay /// 0042157 // lipoprotein metabolic process // traceable author statement /// 0042157 // lipoprotein metabolic process // inferred from electronic annotation /// 0042158 // lipoprotein biosynthetic process // inferred from electronic annotation /// 0042632 // cholesterol homeostasis // inferred from direct assay /// 0043691 // reverse cholesterol transport // inferred from mutant phenotype /// 0043691 // reverse cholesterol transport // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045332 // phospholipid translocation // inferred from electronic annotation /// 0050702 // interleukin-1 beta secretion // inferred from mutant phenotype /// 0055091 // phospholipid homeostasis // inferred from mutant phenotype /// 0055098 // response to low-density lipoprotein particle stimulus // inferred from expression pattern /// 0060155 // platelet dense granule organization // inferred from mutant phenotype /// 0071222 // cellular response to lipopolysaccharide // inferred from electronic annotation /// 0071300 // cellular response to retinoic acid // inferred from electronic annotation","0005622 // intracellular // inferred from mutant phenotype /// 0005624 // membrane fraction // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030139 // endocytic vesicle // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation /// 0045121 // membrane raft // inferred from direct assay /// 0045335 // phagocytic vesicle // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred by curator /// 0005548 // phospholipid transporter activity // inferred from direct assay /// 0005548 // phospholipid transporter activity // inferred from electronic annotation /// 0008509 // anion transmembrane transporter activity // inferred from sequence or structural similarity /// 0008509 // anion transmembrane transporter activity // inferred from electronic annotation /// 0015485 // cholesterol binding // inferred by curator /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0017127 // cholesterol transporter activity // inferred from direct assay /// 0017127 // cholesterol transporter activity // inferred from electronic annotation /// 0019905 // syntaxin binding // inferred from physical interaction /// 0031267 // small GTPase binding // inferred from physical interaction /// 0034185 // apolipoprotein binding // inferred from physical interaction /// 0034186 // apolipoprotein A-I binding // inferred from physical interaction /// 0034188 // apolipoprotein A-I receptor activity // inferred from direct assay","chr9:107606051-107690426 (-) // 81.74 // q31.1"]
["11735036_a_at",15.507611,12.697617,10.828854,11.272568,13.102654,14.813089,0.2657678,-0.022650719,-0.25232768,-0.1943922,0.022650957,0.19966388,0.9853279,0.9507382,-1.0086164,-0.012377656,1.0086164,"down","SORCS1",114815.0,"0007218 // neuropeptide signaling pathway // non-traceable author statement","0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008188 // neuropeptide receptor activity // non-traceable author statement","chr10:108333420-108924326 (-) // 94.46 // q25.1"]
["11730971_a_at",111.67785,105.7685,111.46102,117.62036,128.70302,123.39888,-0.037397385,-0.11583042,-0.040201664,0.037396908,0.167305,0.10658836,0.26192343,0.020847766,-1.1236868,-0.16823997,1.1236868,"down","CYP4F12",66002.0,"0000038 // very long-chain fatty acid metabolic process // inferred from sequence or structural similarity /// 0001676 // long-chain fatty acid metabolic process // inferred from sequence or structural similarity /// 0003091 // renal water homeostasis // inferred from sequence or structural similarity /// 0003095 // pressure natriuresis // inferred from sequence or structural similarity /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0017144 // drug metabolic process // inferred from sequence or structural similarity /// 0019369 // arachidonic acid metabolic process // inferred from sequence or structural similarity /// 0019373 // epoxygenase P450 pathway // inferred from sequence or structural similarity /// 0030195 // negative regulation of blood coagulation // inferred from sequence or structural similarity /// 0036101 // leukotriene B4 catabolic process // inferred from sequence or structural similarity /// 0042360 // vitamin E metabolic process // inferred from sequence or structural similarity /// 0042371 // vitamin K biosynthetic process // inferred from sequence or structural similarity /// 0044281 // small molecule metabolic process // traceable author statement /// 0055078 // sodium ion homeostasis // inferred from sequence or structural similarity /// 0055114 // oxidation-reduction process // inferred from sequence or structural similarity /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from sequence or structural similarity /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from sequence or structural similarity","0004497 // monooxygenase activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from electronic annotation /// 0008392 // arachidonic acid epoxygenase activity // inferred from sequence or structural similarity /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016705 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen // inferred from electronic annotation /// 0018685 // alkane 1-monooxygenase activity // inferred from sequence or structural similarity /// 0020037 // heme binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047057 // vitamin-K-epoxide reductase (warfarin-sensitive) activity // inferred from sequence or structural similarity /// 0050051 // leukotriene-B4 20-monooxygenase activity // inferred from sequence or structural similarity /// 0070330 // aromatase activity // inferred from electronic annotation","chr19:15783885-15807984 (+) // 98.06 // p13.12"]
["11722025_x_at",175.19316,171.97987,177.6012,166.54073,168.06546,164.42737,0.043314934,0.016608238,0.06300974,-0.02975607,-0.016608715,-0.048181057,0.20584597,0.01119219,1.0515321,0.07249296,1.0515321,"up","ABCF2",10061.0,"0006200 // ATP catabolic process // inferred from electronic annotation /// 0006810 // transport // traceable author statement","0005739 // mitochondrion // inferred from electronic annotation /// 0005740 // mitochondrial envelope // traceable author statement /// 0043190 // ATP-binding cassette (ABC) transporter complex // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0005215 // transporter activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0005524 // ATP binding // traceable author statement /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation","chr7:150909140-150924666 (-) // 81.12 // q36.1"]
["11732237_a_at",11.631376,11.010163,10.635058,11.010163,10.703962,11.786562,0.07918596,0.0,-0.05000782,0.0,-0.0406909,0.098306894,0.9589734,0.8734142,-1.0065922,-0.009479258,1.0065922,"down","GYPA",2993.0,"0007016 // cytoskeletal anchoring at plasma membrane // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0047484 // regulation of response to osmotic stress // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from electronic annotation","chr4:145030456-145061939 (-) // 81.82 // q31.21"]
["11727427_a_at",26.881119,23.97428,26.073315,26.126696,25.189571,25.10915,0.068892956,-0.096212864,0.024873734,0.027824402,-0.024873734,-0.029487133,0.9631414,0.88621426,1.0055816,0.008030182,1.0055816,"up","ACSM3",6296.0,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008217 // regulation of blood pressure // non-traceable author statement /// 0008217 // regulation of blood pressure // traceable author statement /// 0042632 // cholesterol homeostasis // non-traceable author statement","0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0015645 // fatty acid ligase activity // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047760 // butyrate-CoA ligase activity // inferred from electronic annotation","chr16:20775023-20808901 (+) // 99.37 // p12.3"]
["11726440_s_at",64.41753,65.18367,66.76731,65.04639,70.94215,65.68178,-0.022548676,-0.0054912567,0.029140472,-0.008532524,0.116641045,0.0054912567,0.75725746,0.42656726,-1.0263336,-0.0374997,1.0263336,"down","MALT1",10892.0,"0001923 // B-1 B cell differentiation // inferred from electronic annotation /// 0002237 // response to molecule of bacterial origin // inferred from electronic annotation /// 0002726 // positive regulation of T cell cytokine production // inferred from mutant phenotype /// 0006508 // proteolysis // inferred from direct assay /// 0006508 // proteolysis // inferred from electronic annotation /// 0006916 // anti-apoptosis // non-traceable author statement /// 0006952 // defense response // non-traceable author statement /// 0007250 // activation of NF-kappaB-inducing kinase activity // inferred from mutant phenotype /// 0009620 // response to fungus // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from direct assay /// 0031398 // positive regulation of protein ubiquitination // non-traceable author statement /// 0032743 // positive regulation of interleukin-2 production // inferred from mutant phenotype /// 0042098 // T cell proliferation // inferred from electronic annotation /// 0042113 // B cell activation // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from direct assay /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from mutant phenotype /// 0045087 // innate immune response // inferred from electronic annotation /// 0050852 // T cell receptor signaling pathway // inferred from direct assay /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0050856 // regulation of T cell receptor signaling pathway // inferred from electronic annotation /// 0050870 // positive regulation of T cell activation // inferred by curator /// 0050870 // positive regulation of T cell activation // inferred from electronic annotation /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from mutant phenotype /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from electronic annotation /// 0051168 // nuclear export // inferred from direct assay /// 0051259 // protein oligomerization // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0032449 // CBM complex // non-traceable author statement /// 0043234 // protein complex // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0002020 // protease binding // inferred from electronic annotation /// 0004197 // cysteine-type endopeptidase activity // non-traceable author statement /// 0004197 // cysteine-type endopeptidase activity // inferred from electronic annotation /// 0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0004871 // signal transducer activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from direct assay /// 0008233 // peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0019209 // kinase activator activity // inferred from mutant phenotype /// 0043621 // protein self-association // inferred from physical interaction","chr18:56338617-56417212 (+) // 68.09 // q21.32"]
["11737282_x_at",32.276794,33.67204,32.473267,37.474976,32.14188,34.726147,-0.03490448,0.026149273,-0.026149273,0.18052578,-0.040947437,0.07062054,0.6613813,0.28790405,-1.0582651,-0.08170106,1.0582651,"down","ZC3HAV1L",92092.0,"","","","chr7:138710177-138720775 (-) // 74.86 // q34"]
["11727854_s_at",762.02386,716.9877,791.87634,706.11456,712.9666,709.81683,0.091944695,0.0040569305,0.14738369,-0.017989159,-0.0040569305,-0.010444641,0.4467984,0.09331253,1.0658162,0.09195862,1.0658162,"up","NUP50",10762.0,"0005975 // carbohydrate metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0008645 // hexose transport // traceable author statement /// 0010827 // regulation of glucose transport // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0015758 // glucose transport // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046907 // intracellular transport // inferred from electronic annotation /// 0051028 // mRNA transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005643 // nuclear pore // inferred from electronic annotation /// 0005643 // nuclear pore // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr22:45559725-45584055 (+) // 98.43 // q13.31"]
["11759858_at",23.317945,24.11162,21.911917,30.48663,21.341522,21.936329,0.044059277,0.092347145,-0.04566574,0.4307952,-0.0837183,-0.044059277,0.89068365,0.69887877,-1.0502691,-0.07075906,1.0502691,"down","CTAGE5",4253.0,"0043085 // positive regulation of catalytic activity // traceable author statement","","0008047 // enzyme activator activity // traceable author statement","chr14:39736449-39857948 (+) // 72.17 // q21.1"]
["11747296_a_at",113.04068,105.188705,117.99019,112.45799,103.075745,116.72263,0.003727913,-0.10013437,0.065552235,-0.003727913,-0.12940931,0.04997015,0.94038254,0.8201732,1.0121602,0.017437626,1.0121602,"up","ARMC8",25852.0,"","","","chr3:137906124-138015096 (+) // 97.89 // q22.3"]
["11715723_s_at",1155.3179,1168.0907,1202.0659,1192.8175,1317.1144,1294.8949,-0.051654816,-0.03579235,0.0055713654,-0.0055713654,0.13743591,0.11289024,0.42960596,0.08290933,-1.0783883,-0.108876795,1.0783883,"down","ITM2B",9445.0,"0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0008219 // cell death // inferred from electronic annotation /// 0042985 // negative regulation of amyloid precursor protein biosynthetic process // inferred from direct assay","0000139 // Golgi membrane // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030660 // Golgi-associated vesicle membrane // inferred from direct assay /// 0031301 // integral to organelle membrane // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0001540 // beta-amyloid binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation","chr13:48807273-48836451 (+) // 86.85 // q14.2"]
["11721415_at",36.102875,39.24378,36.35069,40.236485,43.670017,42.98761,-0.13837051,-0.018020153,-0.12850142,0.018020153,0.13615894,0.1134367,0.2810659,0.02531337,-1.1361626,-0.18416937,1.1361626,"down","TMEM62",80021.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr15:43425719-43477344 (+) // 97.52 // q15.2"]
["11743796_a_at",305.06635,287.0018,323.38342,292.70645,291.2169,275.25806,0.06334877,-0.02471447,0.14747143,0.0036802292,-0.0036802292,-0.08498955,0.575597,0.18964216,1.0646396,0.09036509,1.0646396,"up","APITD1 /// APITD1-CORT","100526739 /// 378708","0000087 // M phase of mitotic cell cycle // traceable author statement /// 0000236 // mitotic prometaphase // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0000712 // resolution of meiotic recombination intermediates // inferred from mutant phenotype /// 0006281 // DNA repair // inferred from direct assay /// 0006281 // DNA repair // inferred from electronic annotation /// 0006352 // transcription initiation, DNA-dependent // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from direct assay /// 0006974 // response to DNA damage stimulus // inferred from mutant phenotype /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0031297 // replication fork processing // inferred from mutant phenotype /// 0031398 // positive regulation of protein ubiquitination // traceable author statement /// 0051301 // cell division // inferred from electronic annotation","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0043240 // Fanconi anaemia nuclear complex // inferred from direct assay /// 0071821 // FANCM-MHF complex // inferred from direct assay","0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from direct assay /// 0003690 // double-stranded DNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction","chr1:10490158-10512210 (+) // 94.29 // p36.22"]
["11748408_a_at",47.586475,53.798145,41.16403,44.838665,40.637547,44.479748,0.09160566,0.26861048,-0.11756182,0.005797386,-0.13613272,-0.005797386,0.7094419,0.35395008,1.0914624,0.1262624,1.0914624,"up","C1orf9",51430.0,"0001503 // ossification // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030867 // rough endoplasmic reticulum membrane // inferred from electronic annotation","","chr1:172502145-172572423 (+) // 96.15 // q24.3"]
["11749566_s_at",165.93814,164.72421,173.32356,156.59222,161.30942,159.51283,0.025703907,0.015111446,0.08852577,-0.05792904,-0.01511097,-0.031269073,0.33507898,0.04053691,1.0554684,0.07788344,1.0554684,"up","LCMT2",9836.0,"0008033 // tRNA processing // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation","","0005515 // protein binding // inferred from physical interaction /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr15:43620438-43622780 (-) // 98.56 // q15.3"]
["11731251_at",18.671265,18.753225,18.691729,19.911564,18.7122,18.581026,-0.0023698807,0.0039491653,-7.8964233E-4,0.09041691,7.8964233E-4,-0.00935936,0.76572895,0.44284448,-1.0189047,-0.0270191,1.0189047,"down","EPHA8",2046.0,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0006929 // substrate-dependent cell migration // inferred from sequence or structural similarity /// 0006929 // substrate-dependent cell migration // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007411 // axon guidance // inferred from sequence or structural similarity /// 0007411 // axon guidance // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016322 // neuron remodeling // inferred from sequence or structural similarity /// 0016322 // neuron remodeling // inferred from electronic annotation /// 0030155 // regulation of cell adhesion // inferred from sequence or structural similarity /// 0030155 // regulation of cell adhesion // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from sequence or structural similarity /// 0031175 // neuron projection development // inferred from electronic annotation /// 0033628 // regulation of cell adhesion mediated by integrin // inferred from sequence or structural similarity /// 0033628 // regulation of cell adhesion mediated by integrin // inferred from electronic annotation /// 0043410 // positive regulation of MAPK cascade // inferred from sequence or structural similarity /// 0043410 // positive regulation of MAPK cascade // inferred from electronic annotation /// 0043552 // positive regulation of phosphatidylinositol 3-kinase activity // inferred from sequence or structural similarity /// 0043552 // positive regulation of phosphatidylinositol 3-kinase activity // inferred from electronic annotation /// 0046777 // protein autophosphorylation // inferred from sequence or structural similarity /// 0046777 // protein autophosphorylation // inferred from electronic annotation /// 0048013 // ephrin receptor signaling pathway // inferred from sequence or structural similarity /// 0048013 // ephrin receptor signaling pathway // inferred from electronic annotation","0005768 // endosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from sequence or structural similarity /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043005 // neuron projection // inferred from sequence or structural similarity /// 0043005 // neuron projection // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005003 // ephrin receptor activity // inferred from electronic annotation /// 0005004 // GPI-linked ephrin receptor activity // inferred from sequence or structural similarity /// 0005004 // GPI-linked ephrin receptor activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr1:22889994-22916114 (+) // 83.62 // p36.12"]
["11742443_a_at",6.1774993,5.5055647,5.963832,5.917163,6.0286613,5.286131,0.056450367,-0.10968208,0.005666971,-0.005666971,0.02126503,-0.16836047,0.8801877,0.6723248,1.0246036,0.035065874,1.0246036,"up","PRDM13",59336.0,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0022008 // neurogenesis // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:100054649-100063454 (+) // 95.63 // q16.2"]
["11763254_at",9.786464,9.921274,11.789211,9.36498,11.397439,9.834548,-0.013404608,0.006333351,0.25520325,-0.07691622,0.2064457,-0.006333351,0.9128083,0.7487215,1.029287,0.04164528,1.029287,"up","CYAT1 /// IGLC1 /// IGLV1-44","100290481 /// 28823 /// 3537","0006955 // immune response // non-traceable author statement /// 0006956 // complement activation // traceable author statement /// 0006958 // complement activation, classical pathway // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0050776 // regulation of immune response // traceable author statement","0005576 // extracellular region // traceable author statement /// 0005886 // plasma membrane // traceable author statement","0003823 // antigen binding // non-traceable author statement /// 0003823 // antigen binding // inferred from electronic annotation","chr22:22764097-23248558 (+) // 98.34 // q11.22"]
["11733677_at",9.748905,9.067487,9.629563,10.470268,10.342096,12.468332,-0.04260826,-0.14714551,-0.060377836,0.060378075,0.0426085,0.31234813,0.41699237,0.07534481,-1.1662055,-0.22182205,1.1662055,"down","C4orf50",389197.0,"","","","chr4:5958838-5990166 (-) // 78.68 // p16.2"]
["11756078_a_at",33.87547,32.475758,44.380226,37.437195,35.64336,39.889835,-0.108811855,-0.16968966,0.28086424,0.035419464,-0.035419464,0.12696838,0.93091,0.79392314,-1.0292084,-0.041535165,1.0292084,"down","ARHGEF37",389337.0,"0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation","chr5:149010633-149014527 (+) // 68.02 // q32"]
["11764007_at",99.34225,96.268196,98.100655,94.05895,109.11036,100.87398,0.009072304,-0.036275387,-0.009072304,-0.06976938,0.14438105,0.031147003,0.7954987,0.4957014,-1.0333612,-0.047344614,1.0333612,"down","CDKL3",51265.0,"0006464 // cellular protein modification process // traceable author statement /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004693 // cyclin-dependent protein kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr5:133702266-133702844 (-) // 96.82 // q31.1"]
["11742015_at",7.188974,7.494883,6.235351,7.4359384,7.2243743,7.3153605,-0.01611495,0.044005156,-0.22143006,0.032613993,-0.009028196,0.009028196,0.7434432,0.40604535,-1.0536419,-0.07538465,1.0536419,"down","C11orf34",349633.0,"","0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr11:112118875-112131583 (-) // 99.94 // q23.1"]
["11738505_at",7.7560124,7.5165067,6.9077396,7.7560124,6.83694,7.011575,0.09541464,0.05016184,-0.071686745,0.09541464,-0.08654976,-0.05016184,0.8630493,0.6343522,1.0269711,0.038395584,1.0269711,"up","KRTAP13-1",140258.0,"","0005882 // intermediate filament // inferred from electronic annotation","","chr21:31768294-31769136 (+) // 97.91 // q22.11"]
["11749374_a_at",385.71045,378.75513,383.90973,375.69897,378.4098,375.44998,0.026910782,6.580353E-4,0.020159721,-0.011030197,-6.580353E-4,-0.0119867325,0.3648192,0.051567316,1.0166346,0.023801213,1.0166346,"up","MSN",4478.0,"0006928 // cellular component movement // traceable author statement /// 0007159 // leukocyte cell-cell adhesion // inferred from expression pattern /// 0022614 // membrane to membrane docking // inferred from expression pattern /// 0050900 // leukocyte migration // inferred from expression pattern /// 2000401 // regulation of lymphocyte migration // inferred from mutant phenotype","0001931 // uropod // inferred from electronic annotation /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005902 // microvillus // inferred from direct assay /// 0005925 // focal adhesion // inferred from direct assay /// 0009898 // internal side of plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0019898 // extrinsic to membrane // inferred from electronic annotation /// 0030175 // filopodium // inferred from direct assay /// 0030667 // secretory granule membrane // inferred from electronic annotation /// 0031527 // filopodium membrane // inferred from electronic annotation /// 0031528 // microvillus membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from direct assay /// 0045177 // apical part of cell // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0005102 // receptor binding // inferred from physical interaction /// 0005200 // structural constituent of cytoskeleton // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008092 // cytoskeletal protein binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0050839 // cell adhesion molecule binding // inferred from physical interaction","chr5:25910370-25911588 (+) // 92.19 // p14.1 /// chrX:64953101-64960009 (+) // 95.27 // q12"]
["11723766_at",295.8185,289.19897,302.78647,290.12418,281.15826,308.6418,0.01402092,-0.018629074,0.04760933,-0.01402092,-0.059309006,0.07524204,0.92262536,0.7706816,1.0095388,0.013696316,1.0095388,"up","GFER",2671.0,"0006626 // protein targeting to mitochondrion // traceable author statement /// 0007283 // spermatogenesis // non-traceable author statement /// 0008283 // cell proliferation // non-traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005758 // mitochondrial intermembrane space // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016972 // thiol oxidase activity // inferred from electronic annotation","chr16:2033676-2037750 (+) // 84.07 // p13.3"]
["11743102_at",539.334,528.9094,552.4533,565.74335,522.6213,555.5684,-0.017336845,-0.045495033,0.017336845,0.051631927,-0.06274986,0.0254488,0.8637089,0.63672256,-1.0139186,-0.019941889,1.0139186,"down","PTCD3",55037.0,"","0005739 // mitochondrion // inferred from electronic annotation","","chr2:86333345-86369280 (+) // 86.86 // p11.2"]
["11748232_a_at",338.58823,341.1733,365.42188,333.01495,342.232,319.62073,-0.0054864883,0.0054864883,0.10454464,-0.029431343,0.00995636,-0.08865738,0.5780375,0.19209632,1.0503662,0.07089235,1.0503662,"up","DIS3",22894.0,"0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0006364 // rRNA processing // traceable author statement /// 0006364 // rRNA processing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0016075 // rRNA catabolic process // inferred from mutant phenotype /// 0043928 // exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay // traceable author statement /// 0071034 // CUT catabolic process // inferred from mutant phenotype /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation","0000176 // nuclear exosome (RNase complex) // inferred from direct assay /// 0000178 // exosome (RNase complex) // traceable author statement /// 0000178 // exosome (RNase complex) // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000175 // 3'-5'-exoribonuclease activity // inferred from mutant phenotype /// 0003723 // RNA binding // inferred from electronic annotation /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004519 // endonuclease activity // inferred from mutant phenotype /// 0004519 // endonuclease activity // inferred from electronic annotation /// 0004527 // exonuclease activity // inferred from electronic annotation /// 0004540 // ribonuclease activity // inferred from electronic annotation /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation","chr13:73333181-73356254 (-) // 98.38 // q22.1"]
["11739946_a_at",27.773281,32.78404,22.501259,23.732534,30.424038,29.066341,-0.032825947,0.20647001,-0.3365178,-0.25965738,0.098688126,0.032825947,0.98641634,0.9547807,-1.0080568,-0.011576873,1.0080568,"down","PKP1",5317.0,"0006915 // apoptotic process // traceable author statement /// 0006921 // cellular component disassembly involved in apoptotic process // traceable author statement /// 0007155 // cell adhesion // non-traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005882 // intermediate filament // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0030054 // cell junction // inferred from electronic annotation /// 0030057 // desmosome // non-traceable author statement /// 0030057 // desmosome // inferred from electronic annotation","0004871 // signal transducer activity // traceable author statement /// 0019215 // intermediate filament binding // non-traceable author statement /// 0030280 // structural constituent of epidermis // non-traceable author statement","chr1:201252579-201302115 (+) // 96.23 // q32.1"]
["11744521_x_at",635.6551,650.23315,686.406,581.4183,588.37146,584.2639,0.055758476,0.08847141,0.16657639,-0.072909355,-0.055758476,-0.06586552,0.17659962,0.00714815,1.1238477,0.16844657,1.1238477,"up","USP39",10713.0,"0000245 // spliceosomal complex assembly // traceable author statement /// 0006397 // mRNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0004221 // ubiquitin thiolesterase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:85843300-85876403 (+) // 97.03 // p11.2"]
["11763080_at",8.785809,8.767659,8.177168,9.450451,9.666778,9.401822,-0.048882723,-0.051866055,-0.15245652,0.056325436,0.088977575,0.048882723,0.22885334,0.014612885,-1.1089008,-0.14913028,1.1089008,"down","","","0006955 // immune response // traceable author statement /// 0009887 // organ morphogenesis // traceable author statement","","","chr8:30274917-30275420 (+) // 68.29 // p12"]
["11723988_a_at",50.713318,42.617046,45.88179,47.078716,47.777596,50.86529,0.09666014,-0.15427399,-0.047782898,-0.010629654,0.010629654,0.100976944,0.76432526,0.440234,-1.0488375,-0.06879123,1.0488375,"down","NR2F2",7026.0,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001764 // neuron migration // inferred from electronic annotation /// 0001937 // negative regulation of endothelial cell proliferation // inferred from mutant phenotype /// 0001945 // lymph vessel development // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred by curator /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006629 // lipid metabolic process // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007519 // skeletal muscle tissue development // inferred from electronic annotation /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0009956 // radial pattern formation // inferred from electronic annotation /// 0010596 // negative regulation of endothelial cell migration // inferred from mutant phenotype /// 0030522 // intracellular receptor mediated signaling pathway // inferred from direct assay /// 0030522 // intracellular receptor mediated signaling pathway // traceable author statement /// 0030522 // intracellular receptor mediated signaling pathway // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation /// 0032355 // response to estradiol stimulus // inferred from electronic annotation /// 0043401 // steroid hormone mediated signaling pathway // inferred from electronic annotation /// 0045736 // negative regulation of cyclin-dependent protein kinase activity // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0048514 // blood vessel morphogenesis // inferred from electronic annotation /// 0060173 // limb development // inferred from electronic annotation /// 0060849 // regulation of transcription involved in lymphatic endothelial cell fate commitment // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0001972 // retinoic acid binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred by curator /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003707 // steroid hormone receptor activity // inferred from electronic annotation /// 0003714 // transcription corepressor activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0004879 // ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from direct assay /// 0004879 // ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from electronic annotation /// 0004879 // ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr15:96873745-96883489 (+) // 89.47 // q26.2"]
["11740083_x_at",6.5566044,6.1935177,6.750114,6.30976,6.8667145,6.027148,0.027681828,-0.05450797,0.06964493,-0.027681828,0.09435296,-0.093791485,0.90990365,0.74203336,1.0162907,0.023313079,1.0162907,"up","AGMO",392636.0,"0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0006643 // membrane lipid metabolic process // inferred from direct assay /// 0046485 // ether lipid metabolic process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005506 // iron ion binding // inferred from mutant phenotype /// 0005506 // iron ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0050479 // glyceryl-ether monooxygenase activity // inferred from direct assay /// 0050479 // glyceryl-ether monooxygenase activity // inferred from electronic annotation","chr7:15239942-15601640 (-) // 87.84 // p21.2"]
["11747955_a_at",72.45849,69.766846,84.32928,70.55631,68.165016,76.404396,0.019189835,-0.035423756,0.23806858,-0.019189835,-0.06893349,0.09569025,0.7987897,0.50131553,1.0507523,0.07142259,1.0507523,"up","PDZD3",79849.0,"0006811 // ion transport // non-traceable author statement /// 0006833 // water transport // non-traceable author statement /// 0007168 // receptor guanylyl cyclase signaling pathway // inferred by curator /// 0009636 // response to toxin // traceable author statement /// 0019934 // cGMP-mediated signaling // non-traceable author statement /// 0030827 // negative regulation of cGMP biosynthetic process // traceable author statement /// 0031283 // negative regulation of guanylate cyclase activity // inferred from direct assay","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005903 // brush border // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0035003 // subapical complex // inferred from direct assay /// 0045177 // apical part of cell // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0008200 // ion channel inhibitor activity // traceable author statement /// 0030251 // guanylate cyclase inhibitor activity // inferred from direct assay","chr11:119056182-119060201 (+) // 100.0 // q23.3"]
["11717426_a_at",313.3648,301.11185,310.54095,317.01678,330.7076,318.9344,-0.008358002,-0.06590176,-0.021417618,0.008358002,0.06935501,0.017058372,0.4062695,0.06972828,-1.0449855,-0.06348297,1.0449855,"down","CHMP3 /// RNF103-CHMP3","100526767 /// 51652","0000910 // cytokinesis // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0008333 // endosome to lysosome transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016044 // cellular membrane organization // traceable author statement /// 0016197 // endosomal transport // traceable author statement /// 0051036 // regulation of endosome size // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030496 // midbody // inferred from electronic annotation /// 0031902 // late endosome membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0005546 // phosphatidylinositol-4,5-bisphosphate binding // inferred from electronic annotation","chr2:86731061-86790620 (-) // 61.91 // p11.2"]
["11753134_a_at",17.171673,14.435925,14.527052,14.631548,15.478185,17.7142,0.19037127,-0.05999589,-0.050917387,-0.040576935,0.040576935,0.2352469,0.8825125,0.67716044,-1.0366505,-0.051929634,1.0366505,"down","SGK2",10110.0,"0001558 // regulation of cell growth // traceable author statement /// 0006468 // protein phosphorylation // non-traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0006979 // response to oxidative stress // traceable author statement /// 0007243 // intracellular protein kinase cascade // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0032411 // positive regulation of transporter activity // traceable author statement /// 0042127 // regulation of cell proliferation // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0015459 // potassium channel regulator activity // inferred from direct assay /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0017080 // sodium channel regulator activity // non-traceable author statement /// 0017080 // sodium channel regulator activity // traceable author statement","chr20:42194955-42213656 (+) // 99.83 // q13.12"]
["11761878_at",7.2991595,7.3544745,8.107034,7.88322,8.953215,7.8730335,-0.110121965,-0.09923005,0.041321754,9.3245506E-4,0.18455338,-9.326935E-4,0.5946432,0.20871903,-1.0848743,-0.11752786,1.0848743,"down","PARD3B",117583.0,"0007049 // cell cycle // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0005923 // tight junction // inferred from electronic annotation /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","","chr2:205410515-205913318 (+) // 84.98 // q33.3"]
["11748292_a_at",287.3458,284.20728,285.70724,327.309,309.47577,319.86633,-0.05351925,-0.069363594,-0.061769485,0.13434601,0.05351925,0.10116196,0.12395789,0.002720323,-1.1156567,-0.15789321,1.1156567,"down","GBA /// GBAP1","2629 /// 2630","0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006665 // sphingolipid metabolic process // traceable author statement /// 0006665 // sphingolipid metabolic process // inferred from electronic annotation /// 0006680 // glucosylceramide catabolic process // inferred from mutant phenotype /// 0006687 // glycosphingolipid metabolic process // traceable author statement /// 0007040 // lysosome organization // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0023021 // termination of signal transduction // inferred from mutant phenotype /// 0032715 // negative regulation of interleukin-6 production // inferred from direct assay /// 0035307 // positive regulation of protein dephosphorylation // inferred from mutant phenotype /// 0043407 // negative regulation of MAP kinase activity // inferred from mutant phenotype /// 0044281 // small molecule metabolic process // traceable author statement /// 0046512 // sphingosine biosynthetic process // inferred from mutant phenotype /// 0046513 // ceramide biosynthetic process // inferred from mutant phenotype /// 0050728 // negative regulation of inflammatory response // inferred by curator /// 0071356 // cellular response to tumor necrosis factor // inferred from mutant phenotype","0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from sequence or structural similarity /// 0005765 // lysosomal membrane // traceable author statement /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0043202 // lysosomal lumen // inferred from sequence or structural similarity /// 0043202 // lysosomal lumen // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004348 // glucosylceramidase activity // inferred from direct assay /// 0004348 // glucosylceramidase activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from sequence or structural similarity /// 0005102 // receptor binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity, acting on glycosyl bonds // inferred from electronic annotation /// 0043169 // cation binding // inferred from electronic annotation","chr1:155184064-155188796 (-) // 99.61 // q22"]
["11743339_s_at",151.17982,151.17883,164.20737,155.54889,149.8999,148.46477,4.2915344E-6,-4.2915344E-6,0.11925793,0.0411067,-0.012261391,-0.026140213,0.760783,0.43405682,1.0272954,0.03885102,1.0272954,"up","MFSD11",79157.0,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr17:74733582-74775336 (+) // 82.75 // q25.1"]
["11742916_x_at",19.710466,19.578323,16.786251,20.327478,19.848516,18.831268,0.004852295,-0.004852295,-0.22682953,0.04932165,0.014921665,-0.060979366,0.74225825,0.40454164,-1.0546014,-0.076697856,1.0546014,"down","LMTK2",22853.0,"0001881 // receptor recycling // inferred from mutant phenotype /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from direct assay /// 0018107 // peptidyl-threonine phosphorylation // inferred from direct assay /// 0032456 // endocytic recycling // inferred from mutant phenotype /// 0033572 // transferrin transport // inferred from mutant phenotype /// 0045022 // early endosome to late endosome transport // inferred from mutant phenotype /// 0046777 // protein autophosphorylation // inferred from direct assay","0005769 // early endosome // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0055037 // recycling endosome // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004864 // protein phosphatase inhibitor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // non-traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0070853 // myosin VI binding // inferred from physical interaction","chr7:97736168-97835878 (+) // 99.02 // q21.3"]
["11756226_a_at",248.76318,231.15266,234.37897,239.73073,228.68332,258.98978,0.069643974,-0.036283016,-0.016285896,0.016285896,-0.05177784,0.12776613,0.89387923,0.70489633,-1.0175265,-0.025066378,1.0175265,"down","GRIPAP1",56850.0,"","0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation","","chrX:48830135-48845036 (-) // 87.54 // p11.23"]
["11760143_at",70.05867,57.130764,48.400276,58.524715,58.533844,69.736786,0.25940466,-0.03489065,-0.27414322,-1.1301041E-4,1.1301041E-4,0.25276136,0.8463226,0.5970948,-1.0723656,-0.1007969,1.0723656,"down","HLA-F",3134.0,"0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // inferred from electronic annotation /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0002480 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-independent // traceable author statement /// 0006955 // immune response // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0019882 // antigen processing and presentation // inferred from electronic annotation /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0050776 // regulation of immune response // traceable author statement /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060337 // type I interferon-mediated signaling pathway // traceable author statement","0000139 // Golgi membrane // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0012507 // ER to Golgi transport vesicle membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030670 // phagocytic vesicle membrane // traceable author statement /// 0031901 // early endosome membrane // traceable author statement /// 0042612 // MHC class I protein complex // inferred from electronic annotation /// 0071556 // integral to lumenal side of endoplasmic reticulum membrane // traceable author statement","0032393 // MHC class I receptor activity // traceable author statement","chr6:29691170-29694301 (+) // 97.41 // p22.1"]

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["原始数据文件提供多个表单如下：\n\n表单 Slide lists：提供了数据文件名称，样本标签，芯片条码，芯片标签等信息。\n表单 Normalized_Data：提供了所有样本的标准化数据，以及每个探针的表达差异信息，以及每个探针的注释信息等。\n表单 Diff Genes Number：提供了差异基因列表中上下调差异统计情况。\n表单 Differential Data：提供了所有差异基因的标准化数据，差异信息以及注释信息。\n表单 Diff Data(UP)：提供了上调差异基因的标准化数据，差异信息以及注释信息。\n表单 Diff Data(Down)：提供了下调差异基因的标准化数据，差异信息以及注释信息。\n表单 Raw_Data：提供了原始所有探针未经标准化的原始表达值。\n\n该文件提供了芯片中所有探针（probe）的原始信号值（raw）、标准化后信号值（normalized）、T-test的P值（p-value & Corrected p-value）、 FC值（Fold change、Log FC & Absolute FC）、注释后的基因名（Gene symbol & Entrez Gene）、GO注释信息（bp、cc & mf）与基因组位置信息（alignment）。"]